Your job contains 1 sequence.
>024915
MEFDDSTCLGLGIQGALPQSDDHDHQKKNGKKLILKDDQLLPSLTLGRRSENTLKSATKE
KESTDVLQQASCMSMSMSALSSISNSKGIRDHHEDEGGSPRKKLRLTKPQFATLEDTFKE
HSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLKQTEVECELLKRCCEKLKDENKRL
QREVQELKSMKLSGAPLYMKLPAPTLTVCPSCDEKLDGGDGRDVYGDGYGDGDGSSTSRS
SFTFGSKHLYNSFTHPSAFC
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 024915
(260 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2137599 - symbol:HAT22 species:3702 "Arabidops... 485 3.0e-46 1
TAIR|locus:2059143 - symbol:HAT9 species:3702 "Arabidopsi... 482 6.2e-46 1
TAIR|locus:2170194 - symbol:HAT14 "homeobox from Arabidop... 464 5.0e-44 1
TAIR|locus:2129136 - symbol:HB-2 "homeobox protein 2" spe... 423 1.1e-39 1
TAIR|locus:2103396 - symbol:HAT3 "homeobox-leucine zipper... 419 2.9e-39 1
TAIR|locus:2055028 - symbol:HB4 "homeobox-leucine zipper ... 415 7.8e-39 1
TAIR|locus:2171489 - symbol:HAT2 species:3702 "Arabidopsi... 409 3.4e-38 1
TAIR|locus:2129061 - symbol:HAT1 species:3702 "Arabidopsi... 406 7.0e-38 1
TAIR|locus:2049614 - symbol:HB17 "homeobox-leucine zipper... 354 2.3e-32 1
TAIR|locus:2013980 - symbol:HB18 "homeobox-leucine zipper... 309 1.3e-27 1
TAIR|locus:2202795 - symbol:AtHB23 "homeobox protein 23" ... 203 2.3e-16 1
TAIR|locus:2205075 - symbol:ATHB13 species:3702 "Arabidop... 201 3.7e-16 1
TAIR|locus:2084228 - symbol:HB-1 "homeobox 1" species:370... 193 2.6e-15 1
TAIR|locus:2102107 - symbol:HB20 "homeobox protein 20" sp... 166 1.8e-14 2
TAIR|locus:2144578 - symbol:HB51 "homeobox 51" species:37... 175 2.1e-13 1
TAIR|locus:2041283 - symbol:HB6 "homeobox protein 6" spec... 176 3.6e-13 1
TAIR|locus:2140055 - symbol:HB16 "homeobox protein 16" sp... 172 7.9e-13 1
TAIR|locus:2150901 - symbol:HB-3 "homeobox 3" species:370... 172 1.1e-12 1
TAIR|locus:2046263 - symbol:HB21 "homeobox protein 21" sp... 168 1.2e-12 1
TAIR|locus:2062754 - symbol:HB-7 "homeobox 7" species:370... 166 1.9e-12 1
TAIR|locus:2168225 - symbol:HB5 "homeobox protein 5" spec... 167 3.8e-12 1
TAIR|locus:2040520 - symbol:HB22 "homeobox protein 22" sp... 162 5.0e-12 1
TAIR|locus:2115215 - symbol:HB40 "homeobox protein 40" sp... 160 8.2e-12 1
TAIR|locus:2154724 - symbol:HB52 "homeobox protein 52" sp... 149 1.2e-10 1
TAIR|locus:2079542 - symbol:HB-12 "homeobox 12" species:3... 153 2.2e-10 1
UNIPROTKB|A8MWF9 - symbol:MEOX1 "Homeobox protein MOX-1" ... 113 8.8e-09 2
TAIR|locus:2206880 - symbol:HDG11 "AT1G73360" species:370... 151 1.0e-08 1
WB|WBGene00004011 - symbol:pha-2 species:6239 "Caenorhabd... 129 1.8e-08 1
ZFIN|ZDB-GENE-010108-2 - symbol:vent "ventral expressed h... 125 5.5e-08 1
SGD|S000000694 - symbol:HMRA1 "Silenced copy of a1 at HMR... 123 9.6e-08 1
TAIR|locus:2173669 - symbol:HB53 "homeobox 53" species:37... 136 1.1e-07 1
TAIR|locus:2135368 - symbol:PDF2 "AT4G04890" species:3702... 144 1.2e-07 1
TAIR|locus:2119048 - symbol:ATML1 "AT4G21750" species:370... 141 3.2e-07 1
UNIPROTKB|H9L1U3 - symbol:H9L1U3 "Uncharacterized protein... 117 4.9e-07 1
TAIR|locus:2098866 - symbol:HDG1 "AT3G61150" species:3702... 139 6.4e-07 1
RGD|3116 - symbol:Msx2 "msh homeobox 2" species:10116 "Ra... 115 8.4e-07 1
UNIPROTKB|P52953 - symbol:Msx2 "Homeobox protein MSX-2" s... 115 8.4e-07 1
TAIR|locus:2175856 - symbol:REV "AT5G60690" species:3702 ... 137 1.2e-06 1
ZFIN|ZDB-GENE-030131-4340 - symbol:nkx2.9 "NK2 transcript... 118 1.5e-06 1
TAIR|locus:2127008 - symbol:ANL2 "ANTHOCYANINLESS 2" spec... 136 1.5e-06 1
UNIPROTKB|Q03014 - symbol:HHEX "Hematopoietically-express... 129 1.8e-06 1
TAIR|locus:2030913 - symbol:HDG12 "homeodomain GLABROUS 1... 134 2.3e-06 1
UNIPROTKB|A7YWK1 - symbol:HHEX "HHEX protein" species:991... 127 3.1e-06 1
UNIPROTKB|O13023 - symbol:hhex "Hematopoietically-express... 127 3.1e-06 1
UNIPROTKB|Q8AWG6 - symbol:hhex "Hematopoietically-express... 127 3.2e-06 1
ZFIN|ZDB-GENE-050217-3 - symbol:nkx2.2b "NK2 transcriptio... 125 3.7e-06 1
UNIPROTKB|F6USR4 - symbol:MEOX2 "Uncharacterized protein"... 112 3.7e-06 1
UNIPROTKB|J9P7F8 - symbol:NOTO "Uncharacterized protein" ... 109 4.1e-06 1
UNIPROTKB|F1SC87 - symbol:HHEX "Uncharacterized protein" ... 126 4.1e-06 1
UNIPROTKB|E2QXS9 - symbol:HHEX "Uncharacterized protein" ... 126 4.2e-06 1
UNIPROTKB|Q9YH70 - symbol:Xvent-2B "Xvent-2B protein" spe... 127 5.1e-06 1
TAIR|locus:2028140 - symbol:PHV "AT1G30490" species:3702 ... 132 5.3e-06 1
TAIR|locus:2129396 - symbol:HDG4 "AT4G17710" species:3702... 131 5.6e-06 1
TAIR|locus:2062540 - symbol:HDG3 "AT2G32370" species:3702... 131 5.7e-06 1
UNIPROTKB|E2RFP2 - symbol:MEOX1 "Uncharacterized protein"... 119 6.4e-06 2
ZFIN|ZDB-GENE-980526-299 - symbol:hhex "hematopoietically... 122 7.8e-06 1
TAIR|locus:2145116 - symbol:HDG7 "AT5G52170" species:3702... 131 8.0e-06 2
RGD|619932 - symbol:Hhex "hematopoietically expressed hom... 123 1.0e-05 1
UNIPROTKB|E9PLE6 - symbol:NANOGP1 "Putative homeobox prot... 105 1.2e-05 1
UNIPROTKB|F6VMK5 - symbol:NKX3-1 "Uncharacterized protein... 105 1.2e-05 1
UNIPROTKB|Q0P5C3 - symbol:MSX2 "Homeobox protein MSX-2" s... 122 1.3e-05 1
ZFIN|ZDB-GENE-050417-212 - symbol:barhl1a "BarH-like 1a" ... 123 1.3e-05 1
WB|WBGene00000445 - symbol:ceh-22 species:6239 "Caenorhab... 124 1.3e-05 1
MGI|MGI:96086 - symbol:Hhex "hematopoietically expressed ... 122 1.3e-05 1
WB|WBGene00000446 - symbol:ceh-23 species:6239 "Caenorhab... 123 1.3e-05 1
UNIPROTKB|O43364 - symbol:HOXA2 "Homeobox protein Hox-A2"... 124 1.5e-05 1
WB|WBGene00003102 - symbol:mab-5 species:6239 "Caenorhabd... 118 1.5e-05 1
UNIPROTKB|O95231 - symbol:VENTX "Homeobox protein VENTX" ... 121 1.5e-05 1
UNIPROTKB|F1PRX2 - symbol:NKX3-1 "Uncharacterized protein... 104 1.5e-05 1
UNIPROTKB|D2H028 - symbol:PANDA_002743 "Putative uncharac... 104 1.5e-05 1
WB|WBGene00000430 - symbol:ceh-5 species:6239 "Caenorhabd... 104 1.5e-05 1
UNIPROTKB|P35548 - symbol:MSX2 "Homeobox protein MSX-2" s... 121 1.7e-05 1
UNIPROTKB|A1YF16 - symbol:MSX2 "Homeobox protein MSX-2" s... 121 1.7e-05 1
UNIPROTKB|A1YG93 - symbol:MSX2 "Homeobox protein MSX-2" s... 121 1.7e-05 1
UNIPROTKB|A2T764 - symbol:MSX2 "Homeobox protein MSX-2" s... 121 1.7e-05 1
TAIR|locus:2207235 - symbol:HDG2 "AT1G05230" species:3702... 127 1.7e-05 1
UNIPROTKB|F1NR49 - symbol:NKX2-6 "Uncharacterized protein... 110 1.9e-05 1
UNIPROTKB|F1NZK4 - symbol:F1NZK4 "Uncharacterized protein... 115 1.9e-05 1
ZFIN|ZDB-GENE-060118-2 - symbol:barhl1b "BarH-like 1b" sp... 122 2.0e-05 1
UNIPROTKB|F1NF72 - symbol:F1NF72 "Uncharacterized protein... 103 2.0e-05 1
TAIR|locus:2061544 - symbol:PHB "AT2G34710" species:3702 ... 127 2.1e-05 1
UNIPROTKB|Q9GK08 - symbol:MSX2 "Homeobox protein MSX-2" s... 120 2.3e-05 1
MGI|MGI:97169 - symbol:Msx2 "homeobox, msh-like 2" specie... 120 2.3e-05 1
UNIPROTKB|F1NXB2 - symbol:HHEX "Hematopoietically-express... 120 2.5e-05 1
UNIPROTKB|Q05502 - symbol:HHEX "Hematopoietically-express... 120 2.5e-05 1
UNIPROTKB|J9P485 - symbol:EMX2 "Uncharacterized protein" ... 102 2.6e-05 1
UNIPROTKB|F1S1H4 - symbol:MEOX1 "Uncharacterized protein"... 119 2.6e-05 1
UNIPROTKB|E2QSL9 - symbol:BARHL1 "Uncharacterized protein... 121 2.6e-05 1
UNIPROTKB|Q9BZE3 - symbol:BARHL1 "BarH-like 1 homeobox pr... 121 2.6e-05 1
UNIPROTKB|F1S0T9 - symbol:BARHL1 "Uncharacterized protein... 121 2.6e-05 1
MGI|MGI:1859288 - symbol:Barhl1 "BarH-like 1 (Drosophila)... 121 2.6e-05 1
RGD|620648 - symbol:Barhl1 "BarH-like homeobox 1" species... 121 2.6e-05 1
UNIPROTKB|F1NES3 - symbol:HHEX "Hematopoietically-express... 120 2.6e-05 1
UNIPROTKB|E1B9T6 - symbol:BARHL1 "Uncharacterized protein... 121 2.8e-05 1
UNIPROTKB|F1NU45 - symbol:NKX2-6 "Uncharacterized protein... 110 2.8e-05 1
UNIPROTKB|P24343 - symbol:HOXD12 "Homeobox protein Hox-D1... 119 2.9e-05 1
UNIPROTKB|E1B707 - symbol:LBX2 "Uncharacterized protein" ... 115 3.3e-05 1
RGD|1561172 - symbol:Lbx2 "ladybird homeobox 2" species:1... 115 3.3e-05 1
UNIPROTKB|H9L184 - symbol:Gga.48067 "Uncharacterized prot... 101 3.4e-05 1
UNIPROTKB|P97273 - symbol:TITF1 "Thyroid transcription fa... 101 3.4e-05 1
WARNING: Descriptions of 269 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2137599 [details] [associations]
symbol:HAT22 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009735 "response to cytokinin stimulus"
evidence=IEP] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009735 EMBL:AL035709
EMBL:AL161592 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
EMBL:U09336 EMBL:U09337 EMBL:AJ441254 EMBL:BT002318 EMBL:AY087563
EMBL:M90417 IPI:IPI00522748 PIR:T06026 RefSeq:NP_195493.1
UniGene:At.23912 ProteinModelPortal:P46604 SMR:P46604 IntAct:P46604
EnsemblPlants:AT4G37790.1 GeneID:829935 KEGG:ath:AT4G37790
GeneFarm:3981 TAIR:At4g37790 eggNOG:NOG259949 InParanoid:P46604
OMA:TTERVVC PhylomeDB:P46604 ProtClustDB:CLSN2683864
Genevestigator:P46604 GermOnline:AT4G37790 Uniprot:P46604
Length = 278
Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
Identities = 99/170 (58%), Positives = 116/170 (68%)
Query: 91 DHHEDEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNR 150
DH ++EG S RKKLRLTK Q A LED FK HSTL+PKQKQ LA +LNLRPRQVEVWFQNR
Sbjct: 115 DHDDEEGVSARKKLRLTKQQSALLEDNFKLHSTLNPKQKQALARQLNLRPRQVEVWFQNR 174
Query: 151 RARSKLKQTEVECELLKRCCEKLKDENKRLQREVQELKSMKLSGAPLYMKLPAPTLTVCP 210
RAR+KLKQTEV+CE LK+CCE L DEN+RLQ+E+Q+LK++KLS P YM +PA TLT+CP
Sbjct: 175 RARTKLKQTEVDCEFLKKCCETLTDENRRLQKELQDLKALKLS-QPFYMHMPAATLTMCP 233
Query: 211 SCDEKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKHLYNSFTHPSAFC 260
SC E+L YN FT+PSA C
Sbjct: 234 SC-ERLGGGGVGGDTTAVDEETAKGAFSIVTK----PRFYNPFTNPSAAC 278
>TAIR|locus:2059143 [details] [associations]
symbol:HAT9 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
EMBL:AC004786 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
ProtClustDB:CLSN2683864 EMBL:U09341 EMBL:U09342 EMBL:AJ441253
EMBL:AK229218 IPI:IPI00526618 PIR:A84617 PIR:T52371 PIR:T52372
RefSeq:NP_179865.1 UniGene:At.12844 UniGene:At.67823
ProteinModelPortal:P46603 SMR:P46603 EnsemblPlants:AT2G22800.1
GeneID:816811 KEGG:ath:AT2G22800 GeneFarm:3963 TAIR:At2g22800
eggNOG:NOG323848 InParanoid:P46603 OMA:MHMPAST PhylomeDB:P46603
Genevestigator:P46603 GermOnline:AT2G22800 Uniprot:P46603
Length = 274
Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
Identities = 100/178 (56%), Positives = 119/178 (66%)
Query: 89 IRDHHEDEGG-SPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWF 147
I D+HEDE G S RKKLRLTK Q A LE++FK+HSTL+PKQKQ LA +LNLRPRQVEVWF
Sbjct: 99 ISDYHEDEEGISARKKLRLTKQQSALLEESFKDHSTLNPKQKQVLARQLNLRPRQVEVWF 158
Query: 148 QNRRARSKLKQTEVECELLKRCCEKLKDENKRLQREVQELKSMKLSGAPLYMKLPAPTLT 207
QNRRAR+KLKQTEV+CE LK+CCE L DEN RLQ+E+QELK++KL+ P YM +PA TLT
Sbjct: 159 QNRRARTKLKQTEVDCEFLKKCCETLADENIRLQKEIQELKTLKLT-QPFYMHMPASTLT 217
Query: 208 VCPSCDEKLXXXXXXXXXXXXXXXXXX-----XXXXXXXXXXXXKHLYNSFTHPSAFC 260
CPSC E++ H +N FT+PSA C
Sbjct: 218 KCPSC-ERIGGGGGGNGGGGGGSGATAVIVDGSTAKGAFSISSKPHFFNPFTNPSAAC 274
>TAIR|locus:2170194 [details] [associations]
symbol:HAT14 "homeobox from Arabidopsis thaliana"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00340 SMART:SM00389 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
EMBL:AP002032 EMBL:AJ431182 EMBL:BT005879 EMBL:AK227423 EMBL:U09334
IPI:IPI00522942 IPI:IPI00547278 PIR:T52367 RefSeq:NP_196289.2
RefSeq:NP_974743.1 UniGene:At.357 ProteinModelPortal:P46665
SMR:P46665 IntAct:P46665 PaxDb:P46665 PRIDE:P46665
EnsemblPlants:AT5G06710.1 GeneID:830560 KEGG:ath:AT5G06710
GeneFarm:3984 TAIR:At5g06710 eggNOG:NOG310615 InParanoid:P46665
OMA:KTSTPFY PhylomeDB:P46665 ProtClustDB:CLSN2917817
Genevestigator:P46665 Uniprot:P46665
Length = 336
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 87/123 (70%), Positives = 107/123 (86%)
Query: 91 DHHEDEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNR 150
+ ++DE GS RKKLRL+K Q A LED+FKEHSTL+PKQK LA++LNLRPRQVEVWFQNR
Sbjct: 179 EDNDDENGSTRKKLRLSKDQSAFLEDSFKEHSTLNPKQKIALAKQLNLRPRQVEVWFQNR 238
Query: 151 RARSKLKQTEVECELLKRCCEKLKDENKRLQREVQELKSMKLSGAPLYMKLPAPTLTVCP 210
RAR+KLKQTEV+CE LKRCCE L +EN+RLQ+EV+EL+++K S P YM+LPA TLT+CP
Sbjct: 239 RARTKLKQTEVDCEYLKRCCESLTEENRRLQKEVKELRTLKTS-TPFYMQLPATTLTMCP 297
Query: 211 SCD 213
SC+
Sbjct: 298 SCE 300
>TAIR|locus:2129136 [details] [associations]
symbol:HB-2 "homeobox protein 2" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0009733
"response to auxin stimulus" evidence=IMP] [GO:0009826
"unidimensional cell growth" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0048364 "root development" evidence=IMP] [GO:0009735 "response
to cytokinin stimulus" evidence=IEP] [GO:0009641 "shade avoidance"
evidence=IEP] [GO:0010017 "red or far-red light signaling pathway"
evidence=IEP] [GO:0010218 "response to far red light" evidence=IEP]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0010016 "shoot system morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 GO:GO:0045892 GO:GO:0042803 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009735 GO:GO:0009733 GO:GO:0008283
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0010218
GO:GO:0048364 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009826
EMBL:AL161544 GO:GO:0009585 GO:GO:0000976 GO:GO:0010017 KO:K09338
GO:GO:0009641 EMBL:Z97342 EMBL:M90394 EMBL:Z19602 EMBL:X68145
EMBL:X68146 EMBL:AF375453 EMBL:AY081747 EMBL:EF193551 EMBL:EF193552
EMBL:EF193553 EMBL:EF193554 EMBL:EF193555 EMBL:EF193556
EMBL:EF193557 EMBL:EF193558 EMBL:EF193559 EMBL:EF193560
EMBL:EF193561 EMBL:EF193562 EMBL:EF193563 EMBL:EF193564
EMBL:EF193565 EMBL:AY174653 EMBL:AY174654 EMBL:AY174655
EMBL:AY174656 IPI:IPI00517186 PIR:S31424 RefSeq:NP_193411.1
UniGene:At.24419 UniGene:At.74809 ProteinModelPortal:Q05466
SMR:Q05466 IntAct:Q05466 STRING:Q05466 EnsemblPlants:AT4G16780.1
GeneID:827384 KEGG:ath:AT4G16780 GeneFarm:3977 TAIR:At4g16780
eggNOG:NOG150160 InParanoid:Q05466 OMA:EDGDNSR PhylomeDB:Q05466
ProtClustDB:CLSN2685845 Genevestigator:Q05466 GermOnline:AT4G16780
GO:GO:0010016 Uniprot:Q05466
Length = 284
Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 82/128 (64%), Positives = 105/128 (82%)
Query: 87 KGIRDHHEDEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVW 146
+GI D +++G + RKKLRL+K Q A LE+TFK+HSTL+PKQKQ LA++L LR RQVEVW
Sbjct: 116 RGISD--DEDGDNSRKKLRLSKDQSAILEETFKDHSTLNPKQKQALAKQLGLRARQVEVW 173
Query: 147 FQNRRARSKLKQTEVECELLKRCCEKLKDENKRLQREVQELKSMKLSGAPLYMKLPAPT- 205
FQNRRAR+KLKQTEV+CE L+RCCE L +EN+RLQ+EV EL+++KLS YM + PT
Sbjct: 174 FQNRRARTKLKQTEVDCEFLRRCCENLTEENRRLQKEVTELRALKLS-PQFYMHMSPPTT 232
Query: 206 LTVCPSCD 213
LT+CPSC+
Sbjct: 233 LTMCPSCE 240
>TAIR|locus:2103396 [details] [associations]
symbol:HAT3 "homeobox-leucine zipper protein 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR006712 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 Pfam:PF04618
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AL138646 KO:K09338 HOGENOM:HOG000241612
ProtClustDB:CLSN2683322 EMBL:U09338 EMBL:U09339 EMBL:AJ440781
EMBL:AY099565 EMBL:BT008713 IPI:IPI00525230 PIR:T47850 PIR:T52350
RefSeq:NP_191598.1 UniGene:At.21112 ProteinModelPortal:P46602
SMR:P46602 IntAct:P46602 EnsemblPlants:AT3G60390.1 GeneID:825210
KEGG:ath:AT3G60390 GeneFarm:3969 TAIR:At3g60390 eggNOG:NOG246006
InParanoid:P46602 OMA:IQNTWIN PhylomeDB:P46602
Genevestigator:P46602 GermOnline:AT3G60390 Uniprot:P46602
Length = 315
Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
Identities = 82/116 (70%), Positives = 97/116 (83%)
Query: 99 SPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLKQ 158
S RKKLRL+K Q LE+TFKEHSTL+PKQK LA++LNLR RQVEVWFQNRRAR+KLKQ
Sbjct: 159 SSRKKLRLSKEQALVLEETFKEHSTLNPKQKMALAKQLNLRTRQVEVWFQNRRARTKLKQ 218
Query: 159 TEVECELLKRCCEKLKDENKRLQREVQELKSMKLSGAPLYMKLPAPT-LTVCPSCD 213
TEV+CE LKRCCE L DEN+RLQ+EV EL+++KLS LYM + PT LT+CPSC+
Sbjct: 219 TEVDCEYLKRCCENLTDENRRLQKEVSELRALKLS-PHLYMHMKPPTTLTMCPSCE 273
>TAIR|locus:2055028 [details] [associations]
symbol:HB4 "homeobox-leucine zipper protein 4"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS;IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009641 "shade
avoidance" evidence=IEP] [GO:0009725 "response to hormone stimulus"
evidence=IMP] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0010218
"response to far red light" evidence=IEP] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR006712 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 Pfam:PF04618
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0009506 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0010218
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009725 EMBL:AC002388
KO:K09338 HOGENOM:HOG000241612 EMBL:Y09582 EMBL:AJ441251
IPI:IPI00540244 PIR:T00402 RefSeq:NP_182018.1 UniGene:At.44957
ProteinModelPortal:P92953 SMR:P92953 PaxDb:P92953 PRIDE:P92953
EnsemblPlants:AT2G44910.1 GeneID:819100 KEGG:ath:AT2G44910
GeneFarm:3965 TAIR:At2g44910 eggNOG:NOG279137 InParanoid:P92953
OMA:RGGDENE PhylomeDB:P92953 ProtClustDB:CLSN2683322
ArrayExpress:P92953 Genevestigator:P92953 GermOnline:AT2G44910
GO:GO:0009641 Uniprot:P92953
Length = 318
Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
Identities = 82/127 (64%), Positives = 99/127 (77%)
Query: 88 GIRDHHEDEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWF 147
G D G RKKLRL+K Q LE+TFKEHSTL+PKQK LA++LNLR RQVEVWF
Sbjct: 149 GSDDEDGGNGDGSRKKLRLSKDQALVLEETFKEHSTLNPKQKLALAKQLNLRARQVEVWF 208
Query: 148 QNRRARSKLKQTEVECELLKRCCEKLKDENKRLQREVQELKSMKLSGAPLYMKLPAPT-L 206
QNRRAR+KLKQTEV+CE LKRCC+ L +EN+RLQ+EV EL+++KLS LYM + PT L
Sbjct: 209 QNRRARTKLKQTEVDCEYLKRCCDNLTEENRRLQKEVSELRALKLS-PHLYMHMTPPTTL 267
Query: 207 TVCPSCD 213
T+CPSC+
Sbjct: 268 TMCPSCE 274
>TAIR|locus:2171489 [details] [associations]
symbol:HAT2 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009733 "response to auxin stimulus"
evidence=RCA;IMP] [GO:0009734 "auxin mediated signaling pathway"
evidence=IEP] [GO:0009826 "unidimensional cell growth"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0009641 "shade avoidance"
evidence=IEP] InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892 GO:GO:0009734
GO:GO:0003677 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009826 KO:K09338
HOGENOM:HOG000241612 GO:GO:0009641 EMBL:AB018117
ProtClustDB:CLSN2685891 EMBL:AB067629 EMBL:AJ431183 EMBL:AF428450
EMBL:AY052324 EMBL:AY061904 EMBL:U09335 IPI:IPI00526064 PIR:T52368
RefSeq:NP_199548.1 UniGene:At.25127 ProteinModelPortal:P46601
SMR:P46601 IntAct:P46601 STRING:P46601 EnsemblPlants:AT5G47370.1
GeneID:834784 KEGG:ath:AT5G47370 GeneFarm:3986 TAIR:At5g47370
eggNOG:NOG256142 InParanoid:P46601 OMA:IPINPWA PhylomeDB:P46601
Genevestigator:P46601 GermOnline:AT5G47370 Uniprot:P46601
Length = 283
Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 80/127 (62%), Positives = 97/127 (76%)
Query: 87 KGIRDHHEDEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVW 146
+G D ED G + RKKLRL+K Q A LE+TFKEH+TL+PKQK LA+KLNL RQVEVW
Sbjct: 115 RGTSDEEEDGGETSRKKLRLSKDQSAFLEETFKEHNTLNPKQKLALAKKLNLTARQVEVW 174
Query: 147 FQNRRARSKLKQTEVECELLKRCCEKLKDENKRLQREVQELKSMKLSGAPLYMKLPAPTL 206
FQNRRAR+KLKQTEV+CE LKRC EKL +EN+RLQ+E EL+++KLS P TL
Sbjct: 175 FQNRRARTKLKQTEVDCEYLKRCVEKLTEENRRLQKEAMELRTLKLSPQFYGQMTPPTTL 234
Query: 207 TVCPSCD 213
+CPSC+
Sbjct: 235 IMCPSCE 241
>TAIR|locus:2129061 [details] [associations]
symbol:HAT1 species:3702 "Arabidopsis thaliana"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003006
"developmental process involved in reproduction" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0010582 "floral
meristem determinacy" evidence=IGI] [GO:0043621 "protein
self-association" evidence=IPI] [GO:0048467 "gynoecium development"
evidence=IGI] [GO:0048507 "meristem development" evidence=IGI]
[GO:0080127 "fruit septum development" evidence=IGI]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010582
EMBL:Z97343 GO:GO:0000976 KO:K09338 HOGENOM:HOG000241612
eggNOG:KOG0483 EMBL:AL161546 EMBL:U09332 EMBL:U09333 EMBL:AJ441252
EMBL:BT005756 EMBL:BT006112 EMBL:AY087322 EMBL:AK228587
IPI:IPI00538010 PIR:B71444 RefSeq:NP_193476.1 UniGene:At.19738
ProteinModelPortal:P46600 SMR:P46600 EnsemblPlants:AT4G17460.1
GeneID:827457 KEGG:ath:AT4G17460 GeneFarm:3979 TAIR:At4g17460
InParanoid:P46600 OMA:LMCPSCE PhylomeDB:P46600
ProtClustDB:CLSN2685891 Genevestigator:P46600 GermOnline:AT4G17460
GO:GO:0080127 GO:GO:0048467 Uniprot:P46600
Length = 282
Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
Identities = 82/129 (63%), Positives = 100/129 (77%)
Query: 87 KGIRDHHEDEGGSP-RKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEV 145
+G D ED GG RKKLRL+K Q A LEDTFKEH+TL+PKQK LA+KL L RQVEV
Sbjct: 119 RGTSDEEEDYGGETCRKKLRLSKDQSAVLEDTFKEHNTLNPKQKLALAKKLGLTARQVEV 178
Query: 146 WFQNRRARSKLKQTEVECELLKRCCEKLKDENKRLQREVQELKSMKLSGAPLYMKLPAPT 205
WFQNRRAR+KLKQTEV+CE LKRC EKL +EN+RL++E EL+++KLS LY ++ PT
Sbjct: 179 WFQNRRARTKLKQTEVDCEYLKRCVEKLTEENRRLEKEAAELRALKLSPR-LYGQMSPPT 237
Query: 206 -LTVCPSCD 213
L +CPSC+
Sbjct: 238 TLLMCPSCE 246
>TAIR|locus:2049614 [details] [associations]
symbol:HB17 "homeobox-leucine zipper protein 17"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00340 SMART:SM00389 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 EMBL:AJ431181
EMBL:AC005560 IPI:IPI00540169 PIR:F84424 RefSeq:NP_178252.2
UniGene:At.42490 HSSP:P01366 ProteinModelPortal:Q8S9N6 SMR:Q8S9N6
PRIDE:Q8S9N6 EnsemblPlants:AT2G01430.1 GeneID:814671
KEGG:ath:AT2G01430 GeneFarm:3960 TAIR:At2g01430 eggNOG:NOG248755
HOGENOM:HOG000241612 InParanoid:Q8S9N6 OMA:PRCERIT PhylomeDB:Q8S9N6
ProtClustDB:CLSN2917976 Genevestigator:Q8S9N6 GermOnline:AT2G01430
Uniprot:Q8S9N6
Length = 275
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 71/121 (58%), Positives = 91/121 (75%)
Query: 93 HEDEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRA 152
H+D PRKKLRLT+ Q LED+F+++ TL+PKQK+ LA+ L LRPRQ+EVWFQNRRA
Sbjct: 130 HDDGSAPPRKKLRLTREQSRLLEDSFRQNHTLNPKQKEVLAKHLMLRPRQIEVWFQNRRA 189
Query: 153 RSKLKQTEVECELLKRCCEKLKDENKRLQREVQELKSMKLSGAPLYMKLPAPTLTVCPSC 212
RSKLKQTE+ECE LKR L +EN RL REV+EL++MK+ P + A +LT+CP C
Sbjct: 190 RSKLKQTEMECEYLKRWFGSLTEENHRLHREVEELRAMKVG--PTTVN-SASSLTMCPRC 246
Query: 213 D 213
+
Sbjct: 247 E 247
>TAIR|locus:2013980 [details] [associations]
symbol:HB18 "homeobox-leucine zipper protein 18"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00340 SMART:SM00389 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
EMBL:AC008148 EMBL:AK118149 EMBL:BT005594 EMBL:AK175837
EMBL:AK175965 IPI:IPI00520212 RefSeq:NP_177248.3 UniGene:At.35255
HSSP:Q6B2C0 ProteinModelPortal:Q8GXM7 SMR:Q8GXM7
EnsemblPlants:AT1G70920.1 GeneID:843431 KEGG:ath:AT1G70920
GeneFarm:3959 TAIR:At1g70920 eggNOG:NOG312506 InParanoid:Q8GXM7
OMA:HTEMECE PhylomeDB:Q8GXM7 ProtClustDB:CLSN2918454
Genevestigator:Q8GXM7 GermOnline:AT1G70920 Uniprot:Q8GXM7
Length = 206
Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 66/125 (52%), Positives = 85/125 (68%)
Query: 89 IRDHHEDEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQ 148
+ + + GG RKKLRLTK Q LE++F ++ TL+PKQK+ LA L L RQVEVWFQ
Sbjct: 56 VNEDDSNSGGRRRKKLRLTKEQSHLLEESFIQNHTLTPKQKKDLATFLKLSQRQVEVWFQ 115
Query: 149 NRRARSKLKQTEVECELLKRCCEKLKDENKRLQREVQELKSMKLSGAPLYMKLPAPTLTV 208
NRRARSKLK TE+ECE LKR LK++N+RLQ EV+EL+++K S LT+
Sbjct: 116 NRRARSKLKHTEMECEYLKRWFGSLKEQNRRLQIEVEELRALKPSSTS--------ALTM 167
Query: 209 CPSCD 213
CP C+
Sbjct: 168 CPRCE 172
>TAIR|locus:2202795 [details] [associations]
symbol:AtHB23 "homeobox protein 23" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009739 "response
to gibberellin stimulus" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 GO:GO:0000976
KO:K09338 HOGENOM:HOG000006025 EMBL:AC005508 EMBL:BT009727
EMBL:AK228056 EMBL:AY084913 IPI:IPI00532646 PIR:F86396
RefSeq:NP_564268.1 UniGene:At.43561 ProteinModelPortal:Q8LFD3
SMR:Q8LFD3 STRING:Q8LFD3 PRIDE:Q8LFD3 EnsemblPlants:AT1G26960.1
GeneID:839587 KEGG:ath:AT1G26960 GeneFarm:3956 TAIR:At1g26960
eggNOG:NOG257807 InParanoid:Q8LFD3 OMA:LAFFPEN PhylomeDB:Q8LFD3
ProtClustDB:CLSN2917066 Genevestigator:Q8LFD3 GermOnline:AT1G26960
Uniprot:Q8LFD3
Length = 255
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 44/104 (42%), Positives = 64/104 (61%)
Query: 91 DHHEDEGGSP-RKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQN 149
+ + D+G KK RL Q LE F+ + L +K LA L L+PRQ+ +WFQN
Sbjct: 59 EEYSDDGSKMGEKKRRLNMEQLKALEKDFELGNKLESDRKLELARALGLQPRQIAIWFQN 118
Query: 150 RRARSKLKQTEVECELLKRCCEKLKDENKRLQREVQELKSMKLS 193
RRARSK KQ E + ++LKR E L+DEN+ LQ + Q+L++ ++
Sbjct: 119 RRARSKTKQLEKDYDMLKRQFESLRDENEVLQTQNQKLQAQVMA 162
>TAIR|locus:2205075 [details] [associations]
symbol:ATHB13 species:3702 "Arabidopsis thaliana"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA;IDA] [GO:0009744 "response to sucrose
stimulus" evidence=IMP] [GO:0009965 "leaf morphogenesis"
evidence=IMP] [GO:0048826 "cotyledon morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009744
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009965 GO:GO:0000976 KO:K09338 EMBL:AF208044
EMBL:AC013289 EMBL:AY057572 EMBL:AY133645 EMBL:AY086888
IPI:IPI00519626 PIR:H96719 RefSeq:NP_177136.1 UniGene:At.23736
UniGene:At.68137 ProteinModelPortal:Q8LC03 SMR:Q8LC03 STRING:Q8LC03
PaxDb:Q8LC03 PRIDE:Q8LC03 EnsemblPlants:AT1G69780.1 GeneID:843314
KEGG:ath:AT1G69780 GeneFarm:3958 TAIR:At1g69780 eggNOG:NOG250192
HOGENOM:HOG000006025 InParanoid:Q8LC03 OMA:NPILPSC PhylomeDB:Q8LC03
ProtClustDB:CLSN2682576 Genevestigator:Q8LC03 GO:GO:0048826
Uniprot:Q8LC03
Length = 294
Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 45/102 (44%), Positives = 60/102 (58%)
Query: 88 GIRDHHEDEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWF 147
G D+ +D KK RL Q TLE F+ + L P++K LA L L+PRQ+ +WF
Sbjct: 71 GEEDYSDDGSQMGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWF 130
Query: 148 QNRRARSKLKQTEVECELLKRCCEKLKDENKRLQREVQELKS 189
QNRRAR K KQ E + + LKR + LK EN LQ Q+L++
Sbjct: 131 QNRRARWKTKQLEKDYDTLKRQFDTLKAENDLLQTHNQKLQA 172
>TAIR|locus:2084228 [details] [associations]
symbol:HB-1 "homeobox 1" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009637
"response to blue light" evidence=IEP] [GO:0009651 "response to
salt stress" evidence=IEP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0010167 "response
to nitrate" evidence=RCA] [GO:0015706 "nitrate transport"
evidence=RCA] [GO:0015996 "chlorophyll catabolic process"
evidence=RCA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0009965 "leaf morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893
GO:GO:0042803 GO:GO:0009651 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0009637 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009965 EMBL:AC009325 GO:GO:0000976 KO:K09338
HOGENOM:HOG000006025 EMBL:X58821 EMBL:AY058188 EMBL:AY098972
EMBL:M90416 IPI:IPI00536407 PIR:S16325 RefSeq:NP_186796.1
UniGene:At.41275 UniGene:At.47815 ProteinModelPortal:Q02283
SMR:Q02283 STRING:Q02283 EnsemblPlants:AT3G01470.1 GeneID:821138
KEGG:ath:AT3G01470 GeneFarm:3968 TAIR:At3g01470 eggNOG:NOG245596
InParanoid:Q02283 OMA:QVHLLEK PhylomeDB:Q02283
ProtClustDB:CLSN2684999 Genevestigator:Q02283 GermOnline:AT3G01470
Uniprot:Q02283
Length = 272
Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 49/111 (44%), Positives = 66/111 (59%)
Query: 91 DHHEDEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNR 150
D ++D+ P KK RLT Q LE +F+ + L P++K LA+KL L+PRQV VWFQNR
Sbjct: 59 DFYDDQ--LPEKKRRLTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNR 116
Query: 151 RARSKLKQTEVECELLKRCCEKLKD-------ENKRLQREVQELKSMKLSG 194
RAR K KQ E + +LLK ++L +N +L+ EV L KL G
Sbjct: 117 RARWKTKQLERDYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSLTE-KLQG 166
>TAIR|locus:2102107 [details] [associations]
symbol:HB20 "homeobox protein 20" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009733 "response
to auxin stimulus" evidence=IEP] [GO:0000041 "transition metal ion
transport" evidence=RCA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 KO:K09338
HOGENOM:HOG000006025 EMBL:AC008261 EMBL:AK228890 EMBL:BT029221
EMBL:AY087631 IPI:IPI00546192 RefSeq:NP_186771.1 UniGene:At.41313
HSSP:P14859 ProteinModelPortal:Q8LAT0 SMR:Q8LAT0 IntAct:Q8LAT0
PaxDb:Q8LAT0 PRIDE:Q8LAT0 EnsemblPlants:AT3G01220.1 GeneID:821232
KEGG:ath:AT3G01220 GeneFarm:3967 TAIR:At3g01220 eggNOG:NOG328135
InParanoid:Q8LAT0 OMA:SDINLEM PhylomeDB:Q8LAT0
ProtClustDB:CLSN2684985 Genevestigator:Q8LAT0 Uniprot:Q8LAT0
Length = 286
Score = 166 (63.5 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 40/95 (42%), Positives = 57/95 (60%)
Query: 102 KKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLKQTEV 161
KK RL Q LE +F+ + L P++K LA+ L ++PRQ+ +WFQNRRAR K +Q E
Sbjct: 87 KKKRLQLEQVKALEKSFELGNKLEPERKIQLAKALGMQPRQIAIWFQNRRARWKTRQLER 146
Query: 162 ECELLKRCCEKLKDEN-------KRLQREVQELKS 189
+ + LK+ E LK +N K+L EV LK+
Sbjct: 147 DYDSLKKQFESLKSDNASLLAYNKKLLAEVMALKN 181
Score = 37 (18.1 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 3 FDDSTCLGLGIQGALPQ 19
FD +T GL ++ A PQ
Sbjct: 4 FDPTTEAGLRLEMAFPQ 20
>TAIR|locus:2144578 [details] [associations]
symbol:HB51 "homeobox 51" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009965 "leaf
morphogenesis" evidence=IMP] [GO:0010434 "bract formation"
evidence=IGI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IGI] [GO:0048510 "regulation of timing of
transition from vegetative to reproductive phase" evidence=IGI]
[GO:0010582 "floral meristem determinacy" evidence=IGI] [GO:0048443
"stamen development" evidence=RCA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
EMBL:AB005235 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009965
GO:GO:0048510 GO:GO:0010582 GO:GO:0000976 HOGENOM:HOG000006025
EMBL:AL162506 IPI:IPI00533817 IPI:IPI01019585 PIR:T48406
RefSeq:NP_195999.2 UniGene:At.54712 ProteinModelPortal:Q9LZR0
SMR:Q9LZR0 GeneID:831723 KEGG:ath:AT5G03790 GeneFarm:3983
TAIR:At5g03790 eggNOG:KOG0483 InParanoid:Q9LZR0 OMA:AHPRTEN
ArrayExpress:Q9LZR0 Genevestigator:Q9LZR0 GermOnline:AT5G03790
GO:GO:0010434 Uniprot:Q9LZR0
Length = 235
Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 41/107 (38%), Positives = 64/107 (59%)
Query: 102 KKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLKQTEV 161
KK RLT Q A+LE +F+E L +K L+ +L L+PRQ+ VWFQNRRAR K KQ E
Sbjct: 77 KKKRLTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAVWFQNRRARWKAKQLEQ 136
Query: 162 ECELLKRCCEKLKDENKRLQREVQELKSMKLSGAPLYMKLPAPTLTV 208
+ L++ + + E + L EV++L+++ + ++ A T+ V
Sbjct: 137 LYDSLRQEYDVVSREKQMLHDEVKKLRALLRDQGLIKKQISAGTIKV 183
>TAIR|locus:2041283 [details] [associations]
symbol:HB6 "homeobox protein 6" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS;TAS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
[GO:0009414 "response to water deprivation" evidence=IEP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009738 "abscisic
acid mediated signaling pathway" evidence=TAS] [GO:0009788
"negative regulation of abscisic acid mediated signaling pathway"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0009269 "response to desiccation"
evidence=RCA] [GO:0009409 "response to cold" evidence=RCA]
[GO:0009651 "response to salt stress" evidence=RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0045893 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0009738 GO:GO:0009414 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009788
EMBL:AC006592 GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
ProtClustDB:CLSN2685900 EMBL:X67034 EMBL:AY060569 EMBL:AY063819
EMBL:AY094457 EMBL:AY122903 EMBL:AF104900 IPI:IPI00548532
PIR:E84612 PIR:S47136 RefSeq:NP_565536.1 UniGene:At.25257
ProteinModelPortal:P46668 SMR:P46668 STRING:P46668
EnsemblPlants:AT2G22430.1 GeneID:816775 KEGG:ath:AT2G22430
GeneFarm:3962 TAIR:At2g22430 eggNOG:NOG255500 InParanoid:P46668
OMA:ESDISVK PhylomeDB:P46668 Genevestigator:P46668
GermOnline:AT2G22430 Uniprot:P46668
Length = 311
Score = 176 (67.0 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 46/110 (41%), Positives = 66/110 (60%)
Query: 94 EDEG--GSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRR 151
E+ G G KK RL+ Q LE F+ + L P++K LA++L L+PRQV VWFQNRR
Sbjct: 52 EERGHVGLSEKKRRLSINQVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRR 111
Query: 152 ARSKLKQTEVECELLKRCCEKLKD-------ENKRLQREVQELKSMKLSG 194
AR K KQ E + +LK + L+ +N+ L +E+ +LK+ KL+G
Sbjct: 112 ARWKTKQLEKDYGVLKTQYDSLRHNFDSLRRDNESLLQEISKLKT-KLNG 160
>TAIR|locus:2140055 [details] [associations]
symbol:HB16 "homeobox protein 16" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;NAS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009637
"response to blue light" evidence=IMP] [GO:0030308 "negative
regulation of cell growth" evidence=IMP] [GO:0048510 "regulation of
timing of transition from vegetative to reproductive phase"
evidence=IMP] [GO:0048573 "photoperiodism, flowering"
evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0045893 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0030308
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0009637
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0048510 GO:GO:0048573
EMBL:AL161596 GO:GO:0000976 EMBL:AL035708 KO:K09338
HOGENOM:HOG000006025 EMBL:AF076641 EMBL:AF370620 EMBL:AY054571
EMBL:AY128917 IPI:IPI00531709 PIR:G85474 PIR:T06112
RefSeq:NP_195716.1 UniGene:At.20863 ProteinModelPortal:Q940J1
SMR:Q940J1 PaxDb:Q940J1 PRIDE:Q940J1 EnsemblPlants:AT4G40060.1
GeneID:830169 KEGG:ath:AT4G40060 GeneFarm:3982 TAIR:At4g40060
eggNOG:NOG321520 InParanoid:Q940J1 OMA:CDSSAVL PhylomeDB:Q940J1
ProtClustDB:CLSN2685900 Genevestigator:Q940J1 Uniprot:Q940J1
Length = 294
Score = 172 (65.6 bits), Expect = 7.9e-13, P = 7.9e-13
Identities = 43/105 (40%), Positives = 60/105 (57%)
Query: 91 DHHEDEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNR 150
+HH G KK RL Q LE F+ + L P++K LA++L L+PRQV VWFQNR
Sbjct: 50 NHHHM--GLSEKKRRLKVDQVKALEKNFELENKLEPERKTKLAQELGLQPRQVAVWFQNR 107
Query: 151 RARSKLKQTEVECELLKRCCEKLKDENKRLQRE----VQELKSMK 191
RAR K KQ E + +LK + L+ L+R+ +QE+ +K
Sbjct: 108 RARWKTKQLEKDYGVLKGQYDSLRHNFDSLRRDNDSLLQEISKIK 152
>TAIR|locus:2150901 [details] [associations]
symbol:HB-3 "homeobox 3" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
ProtClustDB:CLSN2684985 EMBL:AL353993 EMBL:X62644 EMBL:AK229364
EMBL:U09340 IPI:IPI00541406 IPI:IPI00570430 PIR:S20930 PIR:T49950
PIR:T52370 RefSeq:NP_568309.2 UniGene:At.49022
ProteinModelPortal:Q00466 SMR:Q00466 EnsemblPlants:AT5G15150.1
GeneID:831367 KEGG:ath:AT5G15150 GeneFarm:3985 TAIR:At5g15150
eggNOG:NOG322183 InParanoid:Q00466 OMA:EERNNIN PhylomeDB:Q00466
Genevestigator:Q00466 GermOnline:AT5G15150 Uniprot:Q00466
Length = 314
Score = 172 (65.6 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 40/96 (41%), Positives = 56/96 (58%)
Query: 88 GIRDHHEDEGGSP---RKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVE 144
G D+ D+G KK RL Q LE +F+ + L P++K LA+ L L+PRQ+
Sbjct: 98 GEEDNLSDDGSHMMLGEKKKRLNLEQVRALEKSFELGNKLEPERKMQLAKALGLQPRQIA 157
Query: 145 VWFQNRRARSKLKQTEVECELLKRCCEKLKDENKRL 180
+WFQNRRAR K KQ E + + LK+ + LK +N L
Sbjct: 158 IWFQNRRARWKTKQLERDYDSLKKQFDVLKSDNDSL 193
>TAIR|locus:2046263 [details] [associations]
symbol:HB21 "homeobox protein 21" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006950 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 KO:K09338 HSSP:P01366 EMBL:AC006135
EMBL:BT031362 IPI:IPI00520845 PIR:F84565 RefSeq:NP_179445.1
UniGene:At.52810 ProteinModelPortal:Q9ZU70 SMR:Q9ZU70
EnsemblPlants:AT2G18550.1 GeneID:816370 KEGG:ath:AT2G18550
GeneFarm:3961 TAIR:At2g18550 eggNOG:NOG270330 HOGENOM:HOG000034122
InParanoid:Q9ZU70 OMA:RVEDEYT PhylomeDB:Q9ZU70
ProtClustDB:CLSN2683051 ArrayExpress:Q9ZU70 Genevestigator:Q9ZU70
GermOnline:AT2G18550 Uniprot:Q9ZU70
Length = 220
Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 42/100 (42%), Positives = 55/100 (55%)
Query: 89 IRDHHEDEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQ 148
+ + E+EG +K +L+ Q LE +F++ L ++K LA +L L PRQV VWFQ
Sbjct: 48 VAEEGENEGNGWFRKRKLSDEQVRMLEISFEDDHKLESERKDRLASELGLDPRQVAVWFQ 107
Query: 149 NRRARSKLKQTEVECELLKRCCEKLKDENKRLQREVQELK 188
NRRAR K K+ E E LK E E RL EV LK
Sbjct: 108 NRRARWKNKRVEDEYTKLKNAYETTVVEKCRLDSEVIHLK 147
>TAIR|locus:2062754 [details] [associations]
symbol:HB-7 "homeobox 7" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009409 "response to cold" evidence=RCA] [GO:0009414 "response
to water deprivation" evidence=IEP;RCA] [GO:0009737 "response to
abscisic acid stimulus" evidence=IEP;RCA] [GO:0009738 "abscisic
acid mediated signaling pathway" evidence=IGI;RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0045893 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009738
GO:GO:0009414 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG252905 HOGENOM:HOG000006310
ProtClustDB:CLSN2683559 EMBL:X67032 EMBL:AC005819 EMBL:AY045826
EMBL:AY091364 IPI:IPI00544746 PIR:H84905 PIR:S47137
RefSeq:NP_182191.1 UniGene:At.136 ProteinModelPortal:P46897
SMR:P46897 STRING:P46897 EnsemblPlants:AT2G46680.1 GeneID:819280
KEGG:ath:AT2G46680 GeneFarm:3966 TAIR:At2g46680 InParanoid:P46897
OMA:THHESEN PhylomeDB:P46897 Genevestigator:P46897 Uniprot:P46897
Length = 258
Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 35/85 (41%), Positives = 53/85 (62%)
Query: 105 RLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLKQTEVECE 164
R + Q +LE F+ + L P++K LA +L L+PRQV +WFQN+RAR K KQ E E
Sbjct: 35 RFSDEQIKSLEMMFESETRLEPRKKVQLARELGLQPRQVAIWFQNKRARWKSKQLETEYN 94
Query: 165 LLKRCCEKLKDENKRLQREVQELKS 189
+L++ + L + + L++E Q L S
Sbjct: 95 ILRQNYDNLASQFESLKKEKQALVS 119
>TAIR|locus:2168225 [details] [associations]
symbol:HB5 "homeobox protein 5" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009787
"regulation of abscisic acid mediated signaling pathway"
evidence=NAS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0009737 "response to abscisic acid stimulus"
evidence=IMP;IDA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=TAS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045893 GO:GO:0042803
GO:GO:0009738 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AB011479 GO:GO:0000976
HOGENOM:HOG000006025 EMBL:X67033 EMBL:AF325054 EMBL:AY074293
EMBL:AY091340 IPI:IPI00526581 PIR:S47135 RefSeq:NP_201334.1
UniGene:At.19698 UniGene:At.67842 ProteinModelPortal:P46667
SMR:P46667 STRING:P46667 EnsemblPlants:AT5G65310.1 GeneID:836656
KEGG:ath:AT5G65310 GeneFarm:3988 TAIR:At5g65310 eggNOG:NOG325574
InParanoid:P46667 OMA:PTSELAF PhylomeDB:P46667
ProtClustDB:CLSN2686460 Genevestigator:P46667 Uniprot:P46667
Length = 312
Score = 167 (63.8 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 39/86 (45%), Positives = 51/86 (59%)
Query: 102 KKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLKQTEV 161
KK RL Q LE F+ + L P++K LA++L L+PRQV +WFQNRRAR K KQ E
Sbjct: 72 KKRRLGVEQVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNRRARWKTKQLER 131
Query: 162 ECELLKRCCEKLKDENKRLQREVQEL 187
+ +LK + LK LQR+ L
Sbjct: 132 DYGVLKSNFDALKRNRDSLQRDNDSL 157
>TAIR|locus:2040520 [details] [associations]
symbol:HB22 "homeobox protein 22" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003700 GO:GO:0006351 EMBL:AC006919 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
EMBL:AC006282 EMBL:DQ056569 IPI:IPI00527137 PIR:E84782
RefSeq:NP_850266.1 UniGene:At.53052 ProteinModelPortal:Q4PSR7
SMR:Q4PSR7 EnsemblPlants:AT2G36610.1 GeneID:818233
KEGG:ath:AT2G36610 GeneFarm:3964 TAIR:At2g36610 eggNOG:NOG297545
InParanoid:Q4PSR7 OMA:MEYWSSS PhylomeDB:Q4PSR7
ProtClustDB:CLSN2918190 Genevestigator:Q4PSR7 GermOnline:AT2G36610
Uniprot:Q4PSR7
Length = 185
Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 41/111 (36%), Positives = 62/111 (55%)
Query: 88 GIRDHHEDEGGSPRKKLRLTKPQFATLEDTFKEH--------STLSPKQKQGLAEKLNLR 139
G + G +KK ++T Q LE +F+E L+P +K L+++L L+
Sbjct: 57 GYGEESNSFNGQEKKKKKMTSEQLKFLERSFQEEIKLNPDRKMKLNPDRKMKLSKELGLQ 116
Query: 140 PRQVEVWFQNRRARSKLKQTEVECELLKRCCEKLKDENKRLQREVQELKSM 190
PRQ+ VWFQNR+AR K KQ E E L++ + + E + LQ E+ +LKSM
Sbjct: 117 PRQIAVWFQNRKARWKNKQLEHLYESLRQEFDIVSREKELLQEELIQLKSM 167
>TAIR|locus:2115215 [details] [associations]
symbol:HB40 "homeobox protein 40" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009733 "response
to auxin stimulus" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009733 GO:GO:0006950 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AL161589 GO:GO:0000976
KO:K09338 HSSP:P10037 HOGENOM:HOG000034122 EMBL:Z99708
EMBL:BX827896 IPI:IPI00520900 PIR:H85433 RefSeq:NP_195392.2
UniGene:At.50404 ProteinModelPortal:O23208 SMR:O23208 PRIDE:O23208
EnsemblPlants:AT4G36740.1 GeneID:829827 KEGG:ath:AT4G36740
GeneFarm:3980 TAIR:At4g36740 eggNOG:NOG244411 InParanoid:O23208
OMA:NSYIDEA PhylomeDB:O23208 Genevestigator:O23208 Uniprot:O23208
Length = 216
Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 40/94 (42%), Positives = 53/94 (56%)
Query: 95 DEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARS 154
D G +K +LT Q LE +F + L ++K LA +L L PRQV VWFQNRRAR
Sbjct: 48 DGGNGLFRKRKLTDEQVNMLEMSFGDEHKLESERKDRLAAELGLDPRQVAVWFQNRRARW 107
Query: 155 KLKQTEVECELLKRCCEKLKDENKRLQREVQELK 188
K K+ E E LK + + + RL+ EV +LK
Sbjct: 108 KNKRLEEEYNKLKNSHDNVVVDKCRLESEVIQLK 141
>TAIR|locus:2154724 [details] [associations]
symbol:HB52 "homeobox protein 52" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009637 "response
to blue light" evidence=IEP] [GO:0009646 "response to absence of
light" evidence=IEP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0009637
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009646 EMBL:AB007644
EMBL:BT015927 EMBL:BT021920 EMBL:AK229211 IPI:IPI00520413
RefSeq:NP_200209.1 UniGene:At.29523 ProteinModelPortal:Q9FN29
SMR:Q9FN29 EnsemblPlants:AT5G53980.1 GeneID:835481
KEGG:ath:AT5G53980 GeneFarm:3987 TAIR:At5g53980 eggNOG:NOG240187
HOGENOM:HOG000029156 InParanoid:Q9FN29 OMA:DELYACF PhylomeDB:Q9FN29
ProtClustDB:CLSN2916425 Genevestigator:Q9FN29 GermOnline:AT5G53980
Uniprot:Q9FN29
Length = 156
Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 47/119 (39%), Positives = 62/119 (52%)
Query: 102 KKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLKQTEV 161
KK RLT+ Q LE F + L P K L+ +L L RQV VWFQN+RAR K + EV
Sbjct: 11 KKKRLTQDQVRQLEKCFTMNKKLEPDLKLQLSNQLGLPQRQVAVWFQNKRARFKTQSLEV 70
Query: 162 E-CELLKRCCEKLKDENKRLQREVQ----ELKSMKLSGAPLYMKLPAPT-LTVCPSCDE 214
+ C L + L D+ K L+ +VQ ELK + A L+ +P + SCDE
Sbjct: 71 QHCTLQSKHEAALSDKAK-LEHQVQFLQDELKRARNQLA-LFTNQDSPVDNSNLGSCDE 127
>TAIR|locus:2079542 [details] [associations]
symbol:HB-12 "homeobox 12" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009651 "response
to salt stress" evidence=IGI;RCA] [GO:0009737 "response to abscisic
acid stimulus" evidence=IEP;RCA;IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009414 "response to water deprivation" evidence=IEP]
[GO:0009615 "response to virus" evidence=IEP] [GO:0006970 "response
to osmotic stress" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0009737 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0045893 GO:GO:0009651 GO:GO:0009414 GO:GO:0003700
GO:GO:0006351 GO:GO:0009615 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AF001949 EMBL:AL138642 EMBL:AY059828
EMBL:BT002206 EMBL:AY087187 IPI:IPI00522302 PIR:T47981 PIR:T51751
RefSeq:NP_191748.1 UniGene:At.25517 HSSP:P02836
ProteinModelPortal:Q9M276 SMR:Q9M276 STRING:Q9M276
EnsemblPlants:AT3G61890.1 GeneID:825362 KEGG:ath:AT3G61890
GeneFarm:3970 TAIR:At3g61890 eggNOG:NOG252905 HOGENOM:HOG000006310
InParanoid:Q9M276 KO:K09338 OMA:HELMNIV PhylomeDB:Q9M276
ProtClustDB:CLSN2683559 Genevestigator:Q9M276 GermOnline:AT3G61890
Uniprot:Q9M276
Length = 235
Score = 153 (58.9 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 33/85 (38%), Positives = 51/85 (60%)
Query: 105 RLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLKQTEVECE 164
R ++ Q +LE F+ + L P++K +A +L L+PRQV +WFQN+RAR K KQ E E
Sbjct: 33 RFSEEQIKSLELIFESETRLEPRKKVQVARELGLQPRQVAIWFQNKRARWKTKQLEKEYN 92
Query: 165 LLKRCCEKLKDENKRLQREVQELKS 189
L+ L + + +++E Q L S
Sbjct: 93 TLRANYNNLASQFEIMKKEKQSLVS 117
>UNIPROTKB|A8MWF9 [details] [associations]
symbol:MEOX1 "Homeobox protein MOX-1" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0001757 "somite specification" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0071837 "HMG box domain
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0001757 EMBL:AC068675 EMBL:AC004149
RefSeq:NP_001035091.1 UniGene:Hs.438 DNASU:4222 GeneID:4222
KEGG:hsa:4222 CTD:4222 HGNC:HGNC:7013 PharmGKB:PA30747
HOGENOM:HOG000230987 KO:K09322 GenomeRNAi:4222 NextBio:16659
IPI:IPI00744956 ProteinModelPortal:A8MWF9 SMR:A8MWF9 STRING:A8MWF9
Ensembl:ENST00000393661 HOVERGEN:HBG100054 ArrayExpress:A8MWF9
Bgee:A8MWF9 Uniprot:A8MWF9
Length = 139
Score = 113 (44.8 bits), Expect = 8.8e-09, Sum P(2) = 8.8e-09
Identities = 27/62 (43%), Positives = 36/62 (58%)
Query: 96 EGGSPRKKLR--LTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRAR 153
EG S +K R TK Q LE F H+ L+ ++ +A L+L RQV+VWFQNRR +
Sbjct: 51 EGSSKARKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQVKVWFQNRRMK 110
Query: 154 SK 155
K
Sbjct: 111 WK 112
Score = 35 (17.4 bits), Expect = 8.8e-09, Sum P(2) = 8.8e-09
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 50 SENTLKSATKEKESTD 65
+E KS+ + KES+D
Sbjct: 27 NETEKKSSRRRKESSD 42
>TAIR|locus:2206880 [details] [associations]
symbol:HDG11 "AT1G73360" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;IDA] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0010091 "trichome branching"
evidence=IGI;IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 GO:GO:0010091 HSSP:P02836 KO:K09338
EMBL:AC012396 EMBL:BT003979 EMBL:BT004915 IPI:IPI00520147
PIR:B96760 RefSeq:NP_177479.1 UniGene:At.34997
ProteinModelPortal:Q9FX31 SMR:Q9FX31 IntAct:Q9FX31 PaxDb:Q9FX31
PRIDE:Q9FX31 EnsemblPlants:AT1G73360.1 GeneID:843671
KEGG:ath:AT1G73360 TAIR:At1g73360 eggNOG:NOG70408 InParanoid:Q9FX31
OMA:MKLAQRM PhylomeDB:Q9FX31 ProtClustDB:CLSN2679864
Genevestigator:Q9FX31 Uniprot:Q9FX31
Length = 722
Score = 151 (58.2 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 36/109 (33%), Positives = 54/109 (49%)
Query: 92 HHEDEGGSPRKKLRL---TKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQ 148
HH D + RKK R T Q LE +FKE KQ+ L+ +L L PRQ++ WFQ
Sbjct: 22 HHHDGSETDRKKKRYHRHTAQQIQRLESSFKECPHPDEKQRNQLSRELGLAPRQIKFWFQ 81
Query: 149 NRRARSKLKQTEVECELLKRCCEKLKDENKRLQREVQELKSMKLSGAPL 197
NRR + K + + LK +K++ EN ++ ++ G P+
Sbjct: 82 NRRTQLKAQHERADNSALKAENDKIRCENIAIREALKHAICPNCGGPPV 130
>WB|WBGene00004011 [details] [associations]
symbol:pha-2 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0043282 "pharyngeal muscle development"
evidence=IMP] [GO:0042755 "eating behavior" evidence=IMP]
[GO:0042694 "muscle cell fate specification" evidence=IMP]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0009887 "organ morphogenesis"
evidence=IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0040014 "regulation of multicellular organism
growth" evidence=IGI;IMP] [GO:0002119 "nematode larval development"
evidence=IGI] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0002119 GO:GO:0042694 GO:GO:0030036 GO:GO:0040014
GO:GO:0042755 GO:GO:0003700 GO:GO:0006357 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0009887
GO:GO:0000976 GeneTree:ENSGT00680000099625 GO:GO:0043282 KO:K08024
EMBL:FO081140 RefSeq:NP_508131.3 ProteinModelPortal:Q21578
SMR:Q21578 EnsemblMetazoa:M6.3 GeneID:187454 KEGG:cel:CELE_M6.3
UCSC:M6.3 CTD:187454 WormBase:M6.3 InParanoid:Q21578 OMA:DEDEMPN
NextBio:935326 ArrayExpress:Q21578 Uniprot:Q21578
Length = 166
Score = 129 (50.5 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 29/70 (41%), Positives = 43/70 (61%)
Query: 99 SPRKK----LRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARS 154
SP+K+ +R T Q LE F H LSP++++ LA+ L+L RQV+ WFQNRRA+
Sbjct: 72 SPQKRKGGQIRFTNEQTDALEHKFDSHKYLSPQERKKLAKSLSLSERQVKTWFQNRRAKW 131
Query: 155 KLKQTEVECE 164
+ + + E E
Sbjct: 132 RRVRKDGEDE 141
>ZFIN|ZDB-GENE-010108-2 [details] [associations]
symbol:vent "ventral expressed homeobox" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IGI] [GO:0042661
"regulation of mesodermal cell fate specification" evidence=IGI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-010108-2 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0009953 HSSP:P06602 GO:GO:0042661 eggNOG:NOG150160
GeneTree:ENSGT00610000086217 OrthoDB:EOG44TP97 EMBL:CABZ01072677
EMBL:AF255044 EMBL:AF277077 IPI:IPI00511939 RefSeq:NP_571775.1
UniGene:Dr.106743 STRING:Q9DGM9 Ensembl:ENSDART00000017456
GeneID:64810 KEGG:dre:64810 CTD:64810 HOGENOM:HOG000206355
InParanoid:Q9DGM9 OMA:RRMRTKF NextBio:20901999 Uniprot:Q9DGM9
Length = 170
Score = 125 (49.1 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 31/73 (42%), Positives = 44/73 (60%)
Query: 91 DHHEDEGGSPRK-KLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQN 149
D E E G R+ + + T Q + LE +F +H L Q++ +AEKL+L QV+ WFQN
Sbjct: 55 DDSEVEAGQNRRVRTKFTCDQISGLEKSFSKHRYLGATQRRKIAEKLHLSETQVKTWFQN 114
Query: 150 RRARSKLKQTEVE 162
RR KLK+ EV+
Sbjct: 115 RRM--KLKR-EVQ 124
>SGD|S000000694 [details] [associations]
symbol:HMRA1 "Silenced copy of a1 at HMR" species:4932
"Saccharomyces cerevisiae" [GO:0007532 "regulation of mating-type
specific transcription, DNA-dependent" evidence=IDA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0003714 "transcription corepressor
activity" evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 SGD:S000000694 GO:GO:0005634 GO:GO:0003714
GO:GO:0043565 EMBL:X59720 EMBL:BK006937 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 PIR:A90983 RefSeq:NP_010021.1
ProteinModelPortal:P0CY11 SMR:P0CY11 IntAct:P0CY11
EnsemblFungi:YCR097W GeneID:850459 KEGG:sce:YCR097W CYGD:YCR097w
KO:K09358 NextBio:966093 ArrayExpress:P0CY11 GermOnline:YCR097W
GO:GO:0007532 Uniprot:P0CY11
Length = 126
Score = 123 (48.4 bits), Expect = 9.6e-08, P = 9.6e-08
Identities = 25/64 (39%), Positives = 38/64 (59%)
Query: 92 HHEDEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRR 151
HH + SP+ K ++ A LE F+ +L+ K+K+ +A+K + P QV VWF N+R
Sbjct: 63 HHIKKEKSPKGKSSISPQARAFLEQVFRRKQSLNSKEKEEVAKKCGITPLQVRVWFINKR 122
Query: 152 ARSK 155
RSK
Sbjct: 123 MRSK 126
>TAIR|locus:2173669 [details] [associations]
symbol:HB53 "homeobox 53" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009733 "response
to auxin stimulus" evidence=IEP] [GO:0048364 "root development"
evidence=TAS] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009733 GO:GO:0006950
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG250192
HSSP:P01366 HOGENOM:HOG000034122 ProtClustDB:CLSN2683051
EMBL:AY683477 EMBL:AB018119 EMBL:BT024847 IPI:IPI00532925
RefSeq:NP_201471.1 UniGene:At.51263 ProteinModelPortal:Q9LVR0
SMR:Q9LVR0 PRIDE:Q9LVR0 EnsemblPlants:AT5G66700.1 GeneID:836803
KEGG:ath:AT5G66700 GeneFarm:3989 TAIR:At5g66700 InParanoid:Q9LVR0
OMA:ELAPETN PhylomeDB:Q9LVR0 Genevestigator:Q9LVR0
GermOnline:AT5G66700 Uniprot:Q9LVR0
Length = 228
Score = 136 (52.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 39/99 (39%), Positives = 55/99 (55%)
Query: 97 GGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKL 156
GG RK+ +LT Q LE +F L +K+ +A +L L PRQV VWFQNRRAR K
Sbjct: 67 GGMLRKR-KLTDEQVNMLEYSFGNEHKLESGRKEKIAGELGLDPRQVAVWFQNRRARWKN 125
Query: 157 KQTEVECELLKRCCEKLKDENKRLQREVQELKSMKLSGA 195
K+ E E LK + + +L+ ++ +L +LS A
Sbjct: 126 KKLEEEYAKLKNHHDNVVLGQCQLESQILKLTE-QLSEA 163
>TAIR|locus:2135368 [details] [associations]
symbol:PDF2 "AT4G04890" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009913 "epidermal cell differentiation"
evidence=IMP] [GO:0048825 "cotyledon development" evidence=IGI]
[GO:0006473 "protein acetylation" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0010027
"thylakoid membrane organization" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=RCA] [GO:0048481 "ovule development" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 EMBL:AL161502 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 HOGENOM:HOG000243256 KO:K09338 HSSP:Q6B2C0
eggNOG:NOG261733 ProtClustDB:CLSN2681990 GO:GO:0048825
GO:GO:0009913 EMBL:AF128393 EMBL:AB056455 EMBL:AF424560
EMBL:AY062575 EMBL:BT000144 IPI:IPI00536198 PIR:E85061
RefSeq:NP_567274.1 UniGene:At.4047 ProteinModelPortal:Q93V99
SMR:Q93V99 IntAct:Q93V99 PaxDb:Q93V99 PRIDE:Q93V99
EnsemblPlants:AT4G04890.1 GeneID:825828 KEGG:ath:AT4G04890
TAIR:At4g04890 InParanoid:Q93V99 OMA:MIPARHM PhylomeDB:Q93V99
Genevestigator:Q93V99 Uniprot:Q93V99
Length = 743
Score = 144 (55.7 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 35/89 (39%), Positives = 48/89 (53%)
Query: 94 EDEGGSPRKKLRL---TKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNR 150
+D P KK R T+ Q LE FKE KQ++ L+ LNL P QV+ WFQN+
Sbjct: 54 QDPSQRPNKKKRYHRHTQRQIQELESFFKECPHPDDKQRKELSRDLNLEPLQVKFWFQNK 113
Query: 151 RARSKLKQTEVECELLKRCCEKLKDENKR 179
R + K + E ++LK +KL+ EN R
Sbjct: 114 RTQMKAQSERHENQILKSDNDKLRAENNR 142
>TAIR|locus:2119048 [details] [associations]
symbol:ATML1 "AT4G21750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] [GO:0009913 "epidermal cell differentiation"
evidence=IGI] [GO:0048825 "cotyledon development" evidence=IGI]
[GO:0006473 "protein acetylation" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0010027
"thylakoid membrane organization" evidence=RCA] [GO:0010075
"regulation of meristem growth" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=RCA] [GO:0048481 "ovule development" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 EMBL:AL161555 HSSP:Q6B2C0 EMBL:U37589
EMBL:AL035527 EMBL:AY091104 EMBL:AY150491 EMBL:AK229970
IPI:IPI00535360 PIR:T05850 RefSeq:NP_001031692.1 RefSeq:NP_193906.2
UniGene:At.2706 ProteinModelPortal:Q8RWU4 SMR:Q8RWU4 STRING:Q8RWU4
PRIDE:Q8RWU4 EnsemblPlants:AT4G21750.1 EnsemblPlants:AT4G21750.2
GeneID:828263 KEGG:ath:AT4G21750 TAIR:At4g21750 eggNOG:NOG261733
InParanoid:Q8RWU4 OMA:HAWTTLS PhylomeDB:Q8RWU4
ProtClustDB:CLSN2681990 Genevestigator:Q8RWU4 GO:GO:0048825
GO:GO:0009913 Uniprot:Q8RWU4
Length = 762
Score = 141 (54.7 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 34/94 (36%), Positives = 51/94 (54%)
Query: 89 IRDHHEDEGGSPRKKLRL---TKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEV 145
+ + +D P KK R T+ Q LE FKE KQ++ L+ +L+L P QV+
Sbjct: 49 LEEELQDPNQRPNKKKRYHRHTQRQIQELESFFKECPHPDDKQRKELSRELSLEPLQVKF 108
Query: 146 WFQNRRARSKLKQTEVECELLKRCCEKLKDENKR 179
WFQN+R + K + E ++LK +KL+ EN R
Sbjct: 109 WFQNKRTQMKAQHERHENQILKSENDKLRAENNR 142
>UNIPROTKB|H9L1U3 [details] [associations]
symbol:H9L1U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00610000086217 EMBL:AADN02076603
Ensembl:ENSGALT00000035653 OMA:FREQRYI Uniprot:H9L1U3
Length = 119
Score = 117 (46.2 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 23/69 (33%), Positives = 39/69 (56%)
Query: 92 HHEDEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRR 151
H + GG R + + + Q LE +F+E + +K+ LA L+L Q++ WFQNRR
Sbjct: 49 HEAEAGGGARPRTKFSAVQLQELERSFREQRYIGASEKRRLAAALDLSQSQIKTWFQNRR 108
Query: 152 ARSKLKQTE 160
+ K ++T+
Sbjct: 109 MKFK-RETQ 116
>TAIR|locus:2098866 [details] [associations]
symbol:HDG1 "AT3G61150" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AL137898 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 HOGENOM:HOG000243256
ProtClustDB:CLSN2685237 KO:K09338 EMBL:AJ224338 EMBL:AY050866
EMBL:AY096757 IPI:IPI00541112 PIR:T47907 RefSeq:NP_191674.1
UniGene:At.21209 HSSP:Q8C172 ProteinModelPortal:Q9M2E8 SMR:Q9M2E8
IntAct:Q9M2E8 PaxDb:Q9M2E8 PRIDE:Q9M2E8 EnsemblPlants:AT3G61150.1
GeneID:825287 KEGG:ath:AT3G61150 TAIR:At3g61150 eggNOG:NOG267226
InParanoid:Q9M2E8 OMA:HTEYDEN PhylomeDB:Q9M2E8
Genevestigator:Q9M2E8 Uniprot:Q9M2E8
Length = 808
Score = 139 (54.0 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 36/95 (37%), Positives = 51/95 (53%)
Query: 95 DEGGSPRKKL----RLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNR 150
D P KK R T Q LE FKE + KQ+ L+ +LNL PRQV+ WFQNR
Sbjct: 102 DTSDRPLKKKKRYHRHTPKQIQDLESVFKECAHPDEKQRLDLSRRLNLDPRQVKFWFQNR 161
Query: 151 RARSKLKQTEVECELLKRCCEKLKDENKRLQREVQ 185
R + K + E LL++ +KL+ EN ++ ++
Sbjct: 162 RTQMKTQIERHENALLRQENDKLRAENMSVREAMR 196
>RGD|3116 [details] [associations]
symbol:Msx2 "msh homeobox 2" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA polymerase
II promoter" evidence=IEA;ISO] [GO:0000978 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding" evidence=IDA]
[GO:0000982 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0000989 "transcription factor binding transcription
factor activity" evidence=IEA;ISO] [GO:0001503 "ossification"
evidence=ISO] [GO:0001649 "osteoblast differentiation"
evidence=ISO;ISS] [GO:0002063 "chondrocyte development"
evidence=IEA;ISO] [GO:0002076 "osteoblast development"
evidence=IEA;IEP;ISO] [GO:0003148 "outflow tract septum
morphogenesis" evidence=IEA;ISO] [GO:0003151 "outflow tract
morphogenesis" evidence=ISO] [GO:0003198 "epithelial to mesenchymal
transition involved in endocardial cushion formation"
evidence=IEA;ISO] [GO:0003416 "endochondral bone growth"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription factor
complex" evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008285 "negative regulation of cell proliferation"
evidence=IEA;ISO] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA;ISO] [GO:0023019 "signal transduction
involved in regulation of gene expression" evidence=IEA;ISO]
[GO:0030326 "embryonic limb morphogenesis" evidence=ISO] [GO:0030509
"BMP signaling pathway" evidence=ISO] [GO:0030513 "positive
regulation of BMP signaling pathway" evidence=IEA;ISO] [GO:0032792
"negative regulation of CREB transcription factor activity"
evidence=IEA;ISO] [GO:0035115 "embryonic forelimb morphogenesis"
evidence=IEA;ISO] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IEA;ISO] [GO:0035313 "wound healing, spreading of epidermal
cells" evidence=IEA;ISO] [GO:0035880 "embryonic nail plate
morphogenesis" evidence=IEA;ISO] [GO:0042060 "wound healing"
evidence=ISO] [GO:0042476 "odontogenesis" evidence=ISO] [GO:0042640
"anagen" evidence=IEA;ISO] [GO:0042733 "embryonic digit
morphogenesis" evidence=ISO] [GO:0042981 "regulation of apoptotic
process" evidence=ISO] [GO:0043065 "positive regulation of apoptotic
process" evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA;ISO] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA;ISO;ISS] [GO:0045599 "negative
regulation of fat cell differentiation" evidence=IEA;ISO] [GO:0045617
"negative regulation of keratinocyte differentiation"
evidence=IEA;ISO] [GO:0045669 "positive regulation of osteoblast
differentiation" evidence=IEA;ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=ISO;ISS] [GO:0048863 "stem
cell differentiation" evidence=IEA;ISO] [GO:0051216 "cartilage
development" evidence=ISO;IMP] [GO:0051795 "positive regulation of
catagen" evidence=IEA;ISO] [GO:0060346 "bone trabecula formation"
evidence=IEA;ISO] [GO:0060349 "bone morphogenesis" evidence=ISO]
[GO:0060364 "frontal suture morphogenesis" evidence=IEA;ISO]
[GO:0060444 "branching involved in mammary gland duct morphogenesis"
evidence=IEA;ISO] [GO:0061180 "mammary gland epithelium development"
evidence=ISO] [GO:0061312 "BMP signaling pathway involved in heart
development" evidence=IEA;ISO] [GO:0070166 "enamel mineralization"
evidence=IEA;ISO] [GO:0071363 "cellular response to growth factor
stimulus" evidence=IEA;ISO] [GO:0071392 "cellular response to
estradiol stimulus" evidence=IEA;ISO] [GO:2000678 "negative
regulation of transcription regulatory region DNA binding"
evidence=IEA;ISO] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:3116 GO:GO:0005737
GO:GO:0045892 GO:GO:0043066 GO:GO:0008285 GO:GO:0071363 GO:GO:0009952
GO:GO:0048863 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000978 GO:GO:0000122
GO:GO:0043065 GO:GO:0000982 GO:GO:0002076 GO:GO:0030513 GO:GO:0035313
GO:GO:0051216 GO:GO:0045669 GO:GO:0045599 GO:GO:0035116 GO:GO:0042640
GO:GO:0035115 GO:GO:0070166 GO:GO:0071392 GO:GO:0000989 GO:GO:0023019
GO:GO:0060444 GO:GO:0002063 GO:GO:0060346 GO:GO:0032792 GO:GO:0003416
GO:GO:0003148 GO:GO:0003198 GO:GO:2000678 GO:GO:0060364
eggNOG:NOG298790 HOGENOM:HOG000231922 OrthoDB:EOG4HQDK0 GO:GO:0045617
GO:GO:0061312 GO:GO:0035880 GO:GO:0051795 EMBL:U12514 IPI:IPI00231048
UniGene:Rn.10414 ProteinModelPortal:P52953 SMR:P52953 STRING:P52953
HOVERGEN:HBG066288 InParanoid:P52953 Genevestigator:P52953
GermOnline:ENSRNOG00000018355 Uniprot:P52953
Length = 139
Score = 115 (45.5 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 30/85 (35%), Positives = 43/85 (50%)
Query: 89 IRDHHEDEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQ 148
+R H + PR T Q LE F++ LS ++ + LNL QV++WFQ
Sbjct: 8 LRKHKTNR--KPRTPF--TTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQ 63
Query: 149 NRRARSKLKQTEVECELLKRCCEKL 173
NRRA++K Q E E E LK + +
Sbjct: 64 NRRAKAKRLQ-EAELEKLKMAAKPM 87
>UNIPROTKB|P52953 [details] [associations]
symbol:Msx2 "Homeobox protein MSX-2" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0000989
"transcription factor binding transcription factor activity"
evidence=IEA] [GO:0002063 "chondrocyte development" evidence=IEA]
[GO:0003148 "outflow tract septum morphogenesis" evidence=IEA]
[GO:0003198 "epithelial to mesenchymal transition involved in
endocardial cushion formation" evidence=IEA] [GO:0003416
"endochondral bone growth" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0023019 "signal transduction
involved in regulation of gene expression" evidence=IEA]
[GO:0030513 "positive regulation of BMP signaling pathway"
evidence=IEA] [GO:0032792 "negative regulation of CREB
transcription factor activity" evidence=IEA] [GO:0035115 "embryonic
forelimb morphogenesis" evidence=IEA] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IEA] [GO:0035313 "wound healing,
spreading of epidermal cells" evidence=IEA] [GO:0035880 "embryonic
nail plate morphogenesis" evidence=IEA] [GO:0042640 "anagen"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0045599 "negative regulation of fat cell
differentiation" evidence=IEA] [GO:0045617 "negative regulation of
keratinocyte differentiation" evidence=IEA] [GO:0045669 "positive
regulation of osteoblast differentiation" evidence=IEA] [GO:0048863
"stem cell differentiation" evidence=IEA] [GO:0051795 "positive
regulation of catagen" evidence=IEA] [GO:0060346 "bone trabecula
formation" evidence=IEA] [GO:0060364 "frontal suture morphogenesis"
evidence=IEA] [GO:0060444 "branching involved in mammary gland duct
morphogenesis" evidence=IEA] [GO:0061312 "BMP signaling pathway
involved in heart development" evidence=IEA] [GO:0070166 "enamel
mineralization" evidence=IEA] [GO:0071363 "cellular response to
growth factor stimulus" evidence=IEA] [GO:0071392 "cellular
response to estradiol stimulus" evidence=IEA] [GO:2000678 "negative
regulation of transcription regulatory region DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:3116
GO:GO:0005737 GO:GO:0045892 GO:GO:0043066 GO:GO:0008285
GO:GO:0071363 GO:GO:0009952 GO:GO:0048863 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0000978 GO:GO:0000122 GO:GO:0043065 GO:GO:0000982
GO:GO:0002076 GO:GO:0030513 GO:GO:0035313 GO:GO:0051216
GO:GO:0045669 GO:GO:0045599 GO:GO:0035116 GO:GO:0042640
GO:GO:0035115 GO:GO:0070166 GO:GO:0071392 GO:GO:0000989
GO:GO:0023019 GO:GO:0060444 GO:GO:0002063 GO:GO:0060346
GO:GO:0032792 GO:GO:0003416 GO:GO:0003148 GO:GO:0003198
GO:GO:2000678 GO:GO:0060364 eggNOG:NOG298790 HOGENOM:HOG000231922
OrthoDB:EOG4HQDK0 GO:GO:0045617 GO:GO:0061312 GO:GO:0035880
GO:GO:0051795 EMBL:U12514 IPI:IPI00231048 UniGene:Rn.10414
ProteinModelPortal:P52953 SMR:P52953 STRING:P52953
HOVERGEN:HBG066288 InParanoid:P52953 Genevestigator:P52953
GermOnline:ENSRNOG00000018355 Uniprot:P52953
Length = 139
Score = 115 (45.5 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 30/85 (35%), Positives = 43/85 (50%)
Query: 89 IRDHHEDEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQ 148
+R H + PR T Q LE F++ LS ++ + LNL QV++WFQ
Sbjct: 8 LRKHKTNR--KPRTPF--TTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQ 63
Query: 149 NRRARSKLKQTEVECELLKRCCEKL 173
NRRA++K Q E E E LK + +
Sbjct: 64 NRRAKAKRLQ-EAELEKLKMAAKPM 87
>TAIR|locus:2175856 [details] [associations]
symbol:REV "AT5G60690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0008289 "lipid binding" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IMP] [GO:0010014
"meristem initiation" evidence=RCA;IMP] [GO:0009956 "radial pattern
formation" evidence=IMP] [GO:0010051 "xylem and phloem pattern
formation" evidence=RCA;IMP] [GO:0009855 "determination of
bilateral symmetry" evidence=RCA;IMP] [GO:0009944 "polarity
specification of adaxial/abaxial axis" evidence=RCA;IMP]
[GO:0007155 "cell adhesion" evidence=RCA] [GO:0009887 "organ
morphogenesis" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0010072 "primary shoot apical meristem
specification" evidence=RCA] [GO:0010073 "meristem maintenance"
evidence=RCA] [GO:0010075 "regulation of meristem growth"
evidence=RCA] [GO:0010090 "trichome morphogenesis" evidence=RCA]
[GO:0016049 "cell growth" evidence=RCA] [GO:0045010 "actin
nucleation" evidence=RCA] [GO:0045595 "regulation of cell
differentiation" evidence=RCA] [GO:0048439 "flower morphogenesis"
evidence=RCA] [GO:0048519 "negative regulation of biological
process" evidence=RCA] [GO:0048589 "developmental growth"
evidence=RCA] [GO:0048765 "root hair cell differentiation"
evidence=RCA] [GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030154 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 EMBL:AB005246 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 GO:GO:0010051 GO:GO:0009855
GO:GO:0009944 KO:K09338 HSSP:P10037 ProtClustDB:CLSN2679470
InterPro:IPR013978 Pfam:PF08670 GO:GO:0009956 GO:GO:0010014
EMBL:AF188994 EMBL:AY170127 EMBL:AF233592 EMBL:AK229564
EMBL:EF598684 EMBL:EF598685 EMBL:EF598686 EMBL:EF598687
EMBL:EF598688 EMBL:EF598689 EMBL:EF598690 EMBL:EF598691
EMBL:EF598692 EMBL:EF598693 EMBL:EF598694 EMBL:EF598695
EMBL:EF598696 EMBL:EF598697 EMBL:EF598698 EMBL:EF598699
EMBL:EF598700 EMBL:EF598701 EMBL:EF598702 EMBL:EF598703
EMBL:EF598704 EMBL:EF598705 EMBL:EF598706 IPI:IPI00531930
RefSeq:NP_200877.1 UniGene:At.49201 UniGene:At.7238
ProteinModelPortal:Q9SE43 SMR:Q9SE43 STRING:Q9SE43 PaxDb:Q9SE43
PRIDE:Q9SE43 EnsemblPlants:AT5G60690.1 GeneID:836190
KEGG:ath:AT5G60690 TAIR:At5g60690 eggNOG:NOG323815
InParanoid:Q9M5B6 OMA:TIELVYM PhylomeDB:Q9SE43
Genevestigator:Q9SE43 Uniprot:Q9SE43
Length = 842
Score = 137 (53.3 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 43/131 (32%), Positives = 64/131 (48%)
Query: 91 DHHEDEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKL----NLRPRQVEVW 146
+ H D G K +R T Q LE + E S ++Q L + N+ P+Q++VW
Sbjct: 17 NRHLDSSG---KYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECSILANIEPKQIKVW 73
Query: 147 FQNRRARSKLKQTEVECELLKR---CCEKL-KDENKRLQREVQELKSMKLSGAPLYMKLP 202
FQNRR R K ++ + + R KL +EN RLQ++V +L +G YMK
Sbjct: 74 FQNRRCRDKQRKEASRLQSVNRKLSAMNKLLMEENDRLQKQVSQLVCE--NG---YMKQQ 128
Query: 203 APTLTVCPSCD 213
T+ PSC+
Sbjct: 129 LTTVVNDPSCE 139
>ZFIN|ZDB-GENE-030131-4340 [details] [associations]
symbol:nkx2.9 "NK2 transcription factor related,
locus 9 (Drosophila)" species:7955 "Danio rerio" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0021514 "ventral spinal cord interneuron
differentiation" evidence=IGI;IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-030131-4340
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0021514
HOGENOM:HOG000231923 HOVERGEN:HBG006689 eggNOG:NOG243784
OrthoDB:EOG466VN6 EMBL:DQ924560 IPI:IPI00617799 UniGene:Dr.79439
STRING:Q06AD2 InParanoid:Q06AD2 Uniprot:Q06AD2
Length = 164
Score = 118 (46.6 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 27/65 (41%), Positives = 39/65 (60%)
Query: 101 RKKLRL--TKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLKQ 158
RKK R+ +K Q LE F++ LS +++ LA L L P QV++WFQN R K+K+
Sbjct: 78 RKKRRVLFSKAQTYELERRFRQQRYLSAPEREQLAHLLRLTPTQVKIWFQNHRY--KMKR 135
Query: 159 TEVEC 163
+EC
Sbjct: 136 ARIEC 140
>TAIR|locus:2127008 [details] [associations]
symbol:ANL2 "ANTHOCYANINLESS 2" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043481 "anthocyanin accumulation in tissues in
response to UV light" evidence=IMP] [GO:0048364 "root development"
evidence=IMP] [GO:0048765 "root hair cell differentiation"
evidence=IMP] [GO:0006473 "protein acetylation" evidence=RCA]
[GO:0042335 "cuticle development" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0043481 GO:GO:0042335 Gene3D:1.10.10.60
SUPFAM:SSF46689 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
EMBL:AF058919 EMBL:AL161472 EMBL:U85254 EMBL:AF077335 EMBL:AK226968
IPI:IPI00538459 PIR:T01237 RefSeq:NP_567183.2 UniGene:At.24442
ProteinModelPortal:Q0WV12 SMR:Q0WV12 STRING:Q0WV12 PaxDb:Q0WV12
PRIDE:Q0WV12 EnsemblPlants:AT4G00730.1 GeneID:828022
KEGG:ath:AT4G00730 TAIR:At4g00730 eggNOG:euNOG18333
HOGENOM:HOG000243256 InParanoid:Q0WV12 OMA:MAGTING PhylomeDB:Q0WV12
ProtClustDB:CLSN2685237 Genevestigator:Q0WV12 GO:GO:0048765
Uniprot:Q0WV12
Length = 802
Score = 136 (52.9 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 37/102 (36%), Positives = 54/102 (52%)
Query: 87 KGIRDHHEDEGGSP-RKKL--RLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQV 143
+GI +D P RKK R T Q LE FKE KQ+ L+++L L RQV
Sbjct: 119 EGISGEDQDAADKPPRKKRYHRHTPQQIQELESMFKECPHPDEKQRLELSKRLCLETRQV 178
Query: 144 EVWFQNRRARSKLKQTEVECELLKRCCEKLKDENKRLQREVQ 185
+ WFQNRR + K + E LL++ +KL+ EN ++ ++
Sbjct: 179 KFWFQNRRTQMKTQLERHENALLRQENDKLRAENMSIREAMR 220
>UNIPROTKB|Q03014 [details] [associations]
symbol:HHEX "Hematopoietically-expressed homeobox protein
HHEX" species:9606 "Homo sapiens" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0002573 "myeloid leukocyte
differentiation" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0007492 "endoderm development" evidence=IEA]
[GO:0009611 "response to wounding" evidence=IEA] [GO:0022027
"interkinetic nuclear migration" evidence=IEA] [GO:0030878 "thyroid
gland development" evidence=IEA] [GO:0031016 "pancreas development"
evidence=IEA] [GO:0035050 "embryonic heart tube development"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0043434 "response to peptide hormone stimulus"
evidence=IEA] [GO:0048568 "embryonic organ development"
evidence=IEA] [GO:0048853 "forebrain morphogenesis" evidence=IEA]
[GO:0060431 "primary lung bud formation" evidence=IEA] [GO:0061009
"common bile duct development" evidence=IEA] [GO:0061010 "gall
bladder development" evidence=IEA] [GO:0061011 "hepatic duct
development" evidence=IEA] [GO:0061017 "hepatoblast
differentiation" evidence=IEA] [GO:0070365 "hepatocyte
differentiation" evidence=IEA] [GO:0071837 "HMG box domain binding"
evidence=IEA] [GO:0090009 "primitive streak formation"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] [GO:0030177 "positive regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0006406 "mRNA export from nucleus"
evidence=IDA] [GO:0007049 "cell cycle" evidence=IDA] [GO:0008190
"eukaryotic initiation factor 4E binding" evidence=IDA] [GO:0008283
"cell proliferation" evidence=IDA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0030154 "cell differentiation" evidence=IC]
[GO:0030183 "B cell differentiation" evidence=ISS] [GO:0016973
"poly(A)+ mRNA export from nucleus" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0070491
"repressing transcription factor binding" evidence=IDA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA;TAS]
[GO:0010944 "negative regulation of transcription by competitive
promoter binding" evidence=TAS] [GO:0017025 "TBP-class protein
binding" evidence=TAS] [GO:0034504 "protein localization to
nucleus" evidence=IDA] [GO:0010621 "negative regulation of
transcription by transcription factor localization" evidence=IC]
[GO:0032993 "protein-DNA complex" evidence=IDA] [GO:0008301 "DNA
binding, bending" evidence=IDA] [GO:0071103 "DNA conformation
change" evidence=IDA] [GO:0016525 "negative regulation of
angiogenesis" evidence=ISS] [GO:0030948 "negative regulation of
vascular endothelial growth factor receptor signaling pathway"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0009611
GO:GO:0016055 GO:GO:0009952 GO:GO:0008283 EMBL:CH471066
GO:GO:0043565 GO:GO:0001701 GO:GO:0043434 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042127
GO:GO:0000122 GO:GO:0008301 GO:GO:0044212 GO:GO:0007049
GO:GO:0030183 GO:GO:0035264 GO:GO:0001570 GO:GO:0016525
GO:GO:0031016 GO:GO:0007492 GO:GO:0070365 GO:GO:0010944
GO:GO:0030177 eggNOG:NOG252905 GO:GO:0034504 GO:GO:0032993
GO:GO:0048568 GO:GO:0090009 GO:GO:0017025 GO:GO:0070491
GO:GO:0030948 GO:GO:0022027 GO:GO:0035050 GO:GO:0008190
GO:GO:0016973 GO:GO:0030878 EMBL:AL590080 GO:GO:0048853
GO:GO:0010621 GO:GO:0061009 CTD:3087 HOGENOM:HOG000049110
HOVERGEN:HBG055460 KO:K08024 OrthoDB:EOG4XKV7W EMBL:X67235
EMBL:L16499 EMBL:AK314891 EMBL:BC014336 EMBL:BC015110 EMBL:BC050638
EMBL:Z21533 IPI:IPI00008771 PIR:JN0767 RefSeq:NP_002720.1
UniGene:Hs.118651 PDB:2E1O PDBsum:2E1O ProteinModelPortal:Q03014
SMR:Q03014 IntAct:Q03014 MINT:MINT-1439118 STRING:Q03014
PhosphoSite:Q03014 DMDM:547658 PRIDE:Q03014 DNASU:3087
Ensembl:ENST00000282728 GeneID:3087 KEGG:hsa:3087 UCSC:uc001kid.3
GeneCards:GC10P094439 HGNC:HGNC:4901 MIM:604420 neXtProt:NX_Q03014
PharmGKB:PA29274 InParanoid:Q03014 OMA:DNSCDQR PhylomeDB:Q03014
EvolutionaryTrace:Q03014 GenomeRNAi:3087 NextBio:12253
ArrayExpress:Q03014 Bgee:Q03014 CleanEx:HS_HHEX
Genevestigator:Q03014 GermOnline:ENSG00000152804 GO:GO:0071103
GO:GO:0061010 GO:GO:0061011 GO:GO:0061017 GO:GO:0002573
GO:GO:0060431 Uniprot:Q03014
Length = 270
Score = 129 (50.5 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 39/114 (34%), Positives = 59/114 (51%)
Query: 90 RDHHEDEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQN 149
R H+ +GG ++R + Q LE F+ LSP +++ LA+ L L RQV+ WFQN
Sbjct: 132 RPLHKRKGG----QVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQN 187
Query: 150 RRAR-SKLKQT------EVECELLKRCCEKLKDENKRLQREVQELKSMKLSGAP 196
RRA+ +LKQ + E E L C++ +D Q + L S + S +P
Sbjct: 188 RRAKWRRLKQENPQSNKKEELESLDSSCDQRQDLPSE-QNKGASLDSSQCSPSP 240
>TAIR|locus:2030913 [details] [associations]
symbol:HDG12 "homeodomain GLABROUS 12" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0010091 "trichome
branching" evidence=IGI] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=RCA] [GO:0031507
"heterochromatin assembly" evidence=RCA] [GO:0045787 "positive
regulation of cell cycle" evidence=RCA] [GO:0048451 "petal
formation" evidence=RCA] [GO:0048453 "sepal formation"
evidence=RCA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 INTERPRO:IPR002913 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 EMBL:AC034106 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 HOGENOM:HOG000243256 GO:GO:0010091 HSSP:P02836
KO:K09338 eggNOG:NOG70408 ProtClustDB:CLSN2679864 EMBL:AF424554
EMBL:BT001050 IPI:IPI00531481 PIR:D86314 RefSeq:NP_564041.2
UniGene:At.15827 ProteinModelPortal:Q9LMT8 SMR:Q9LMT8 PaxDb:Q9LMT8
PRIDE:Q9LMT8 EnsemblPlants:AT1G17920.1 GeneID:838371
KEGG:ath:AT1G17920 TAIR:At1g17920 InParanoid:Q9LMT8 OMA:CENIAMQ
PhylomeDB:Q9LMT8 Genevestigator:Q9LMT8 Uniprot:Q9LMT8
Length = 687
Score = 134 (52.2 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 33/97 (34%), Positives = 50/97 (51%)
Query: 91 DHHEDEGGSPRKKL--RLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQ 148
D E E + +KK R T Q LE TF E KQ+ L+ +L L PRQ++ WFQ
Sbjct: 11 DSSETEKKNKKKKRFHRHTPHQIQRLESTFNECQHPDEKQRNQLSRELGLAPRQIKFWFQ 70
Query: 149 NRRARSKLKQTEVECELLKRCCEKLKDENKRLQREVQ 185
NRR + K + + LK +K++ EN ++ ++
Sbjct: 71 NRRTQKKAQHERADNCALKEENDKIRCENIAIREAIK 107
>UNIPROTKB|A7YWK1 [details] [associations]
symbol:HHEX "HHEX protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0090009 "primitive streak
formation" evidence=IEA] [GO:0071837 "HMG box domain binding"
evidence=IEA] [GO:0071103 "DNA conformation change" evidence=IEA]
[GO:0070491 "repressing transcription factor binding" evidence=IEA]
[GO:0070365 "hepatocyte differentiation" evidence=IEA] [GO:0061017
"hepatoblast differentiation" evidence=IEA] [GO:0061011 "hepatic
duct development" evidence=IEA] [GO:0061010 "gall bladder
development" evidence=IEA] [GO:0061009 "common bile duct
development" evidence=IEA] [GO:0060431 "primary lung bud formation"
evidence=IEA] [GO:0048853 "forebrain morphogenesis" evidence=IEA]
[GO:0048568 "embryonic organ development" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042127 "regulation of
cell proliferation" evidence=IEA] [GO:0035264 "multicellular
organism growth" evidence=IEA] [GO:0035050 "embryonic heart tube
development" evidence=IEA] [GO:0034504 "protein localization to
nucleus" evidence=IEA] [GO:0032993 "protein-DNA complex"
evidence=IEA] [GO:0031016 "pancreas development" evidence=IEA]
[GO:0030878 "thyroid gland development" evidence=IEA] [GO:0030183
"B cell differentiation" evidence=IEA] [GO:0030177 "positive
regulation of Wnt receptor signaling pathway" evidence=IEA]
[GO:0022027 "interkinetic nuclear migration" evidence=IEA]
[GO:0016973 "poly(A)+ mRNA export from nucleus" evidence=IEA]
[GO:0008301 "DNA binding, bending" evidence=IEA] [GO:0008190
"eukaryotic initiation factor 4E binding" evidence=IEA] [GO:0007492
"endoderm development" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0002573 "myeloid leukocyte
differentiation" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001570 "vasculogenesis"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0007165
GO:GO:0043565 GO:GO:0001701 GO:GO:0045944 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122 GO:GO:0008301
GO:GO:0044212 GO:GO:0007049 GO:GO:0030183 GO:GO:0035264
GO:GO:0001570 GO:GO:0031016 GO:GO:0007492 GO:GO:0070365
GO:GO:0030177 eggNOG:NOG252905 GO:GO:0034504 GO:GO:0032993
GO:GO:0048568 GO:GO:0090009 GO:GO:0022027 GO:GO:0035050
GO:GO:0016973 GO:GO:0030878 GeneTree:ENSGT00680000099625
GO:GO:0048853 GO:GO:0061009 CTD:3087 HOGENOM:HOG000049110
HOVERGEN:HBG055460 KO:K08024 OrthoDB:EOG4XKV7W OMA:DNSCDQR
GO:GO:0071103 GO:GO:0061010 GO:GO:0061011 GO:GO:0061017
GO:GO:0002573 GO:GO:0060431 EMBL:DAAA02058821 EMBL:BC134632
IPI:IPI00712870 RefSeq:NP_001098894.1 UniGene:Bt.27920 SMR:A7YWK1
Ensembl:ENSBTAT00000018899 GeneID:539542 KEGG:bta:539542
InParanoid:A7YWK1 NextBio:20878060 Uniprot:A7YWK1
Length = 271
Score = 127 (49.8 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 38/115 (33%), Positives = 60/115 (52%)
Query: 90 RDHHEDEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQN 149
R H+ +GG ++R + Q LE F+ LSP +++ LA+ L L RQV+ WFQN
Sbjct: 134 RPLHKRKGG----QVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQN 189
Query: 150 RRAR-SKLKQT------EVECELLKRCCEKLKDENKRLQREVQELKSMKLSGAPL 197
RRA+ +LKQ + E E L C++ +D + L+S + S +P+
Sbjct: 190 RRAKWRRLKQENPQNNKKEELESLDNSCDQRQDLPS--DQNTGALESSQCSPSPV 242
>UNIPROTKB|O13023 [details] [associations]
symbol:hhex "Hematopoietically-expressed homeobox protein
hhex" species:8355 "Xenopus laevis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0001570 "vasculogenesis" evidence=IMP]
[GO:0001889 "liver development" evidence=IEP] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007507 "heart development" evidence=IMP]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEP;IMP] [GO:0030177 "positive regulation of Wnt receptor
signaling pathway" evidence=IMP] [GO:0035162 "embryonic
hemopoiesis" evidence=ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007507
GO:GO:0016055 GO:GO:0009952 GO:GO:0043565 GO:GO:0001889
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0001570
GO:GO:0030177 GO:GO:0035162 CTD:3087 HOVERGEN:HBG055460 KO:K08024
HSSP:P22808 EMBL:U94837 EMBL:BC059320 RefSeq:NP_001079059.1
UniGene:Xl.225 ProteinModelPortal:O13023 SMR:O13023 GeneID:373590
KEGG:xla:373590 Xenbase:XB-GENE-865680 Uniprot:O13023
Length = 272
Score = 127 (49.8 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 35/104 (33%), Positives = 56/104 (53%)
Query: 90 RDHHEDEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQN 149
R H+ +GG ++R + Q LE F+ LSP +++ LA+ L L RQV+ WFQN
Sbjct: 132 RPLHKRKGG----QVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQN 187
Query: 150 RRAR-SKLKQTEV------ECELLKRCCEKLKDENKRLQREVQE 186
RRA+ +LKQ E E L+ CE+ ++ +++ +E
Sbjct: 188 RRAKWRRLKQENPQGNKKDETESLENICEESQERCLSAEQKSRE 231
>UNIPROTKB|Q8AWG6 [details] [associations]
symbol:hhex "Hematopoietically-expressed homeobox protein
hhex" species:8364 "Xenopus (Silurana) tropicalis" [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0001570 "vasculogenesis" evidence=ISS]
[GO:0001889 "liver development" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007507 "heart development" evidence=ISS]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] [GO:0030177 "positive regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0035162 "embryonic
hemopoiesis" evidence=ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007507
GO:GO:0016055 GO:GO:0009952 GO:GO:0043565 GO:GO:0001889
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0001570
GO:GO:0030177 GO:GO:0035162 eggNOG:NOG252905 CTD:3087
HOGENOM:HOG000049110 HOVERGEN:HBG055460 KO:K08024 OrthoDB:EOG4XKV7W
HSSP:P22808 EMBL:AY160969 EMBL:CR761571 RefSeq:NP_989420.1
UniGene:Str.111 ProteinModelPortal:Q8AWG6 SMR:Q8AWG6 STRING:Q8AWG6
GeneID:395060 KEGG:xtr:395060 Xenbase:XB-GENE-487159
InParanoid:Q8AWG6 Uniprot:Q8AWG6
Length = 274
Score = 127 (49.8 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 35/104 (33%), Positives = 56/104 (53%)
Query: 90 RDHHEDEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQN 149
R H+ +GG ++R + Q LE F+ LSP +++ LA+ L L RQV+ WFQN
Sbjct: 134 RPLHKRKGG----QVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQN 189
Query: 150 RRAR-SKLKQTEV------ECELLKRCCEKLKDENKRLQREVQE 186
RRA+ +LKQ E E L+ CE+ ++ +++ +E
Sbjct: 190 RRAKWRRLKQENPQGNKKDETESLENICEESQERCLSAEQKSRE 233
>ZFIN|ZDB-GENE-050217-3 [details] [associations]
symbol:nkx2.2b "NK2 transcription factor related 2b"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0021514 "ventral spinal cord interneuron
differentiation" evidence=IGI] [GO:0021508 "floor plate formation"
evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-050217-3 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0021508 GO:GO:0021514 HOVERGEN:HBG006689
EMBL:AY729018 IPI:IPI00481458 UniGene:Dr.78851
ProteinModelPortal:Q5XX14 SMR:Q5XX14 STRING:Q5XX14
InParanoid:Q5XX14 ArrayExpress:Q5XX14 Uniprot:Q5XX14
Length = 237
Score = 125 (49.1 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 25/71 (35%), Positives = 42/71 (59%)
Query: 90 RDHHEDEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQN 149
R+ ED G ++++ +K Q LE F++ LS +++ LA+ L+L P QV++WFQN
Sbjct: 86 RESSEDSGKKRKRRILFSKTQTFELERRFRQQRYLSAPEREHLAKLLHLTPTQVKIWFQN 145
Query: 150 RRARSKLKQTE 160
R + K + E
Sbjct: 146 HRYKVKRARAE 156
>UNIPROTKB|F6USR4 [details] [associations]
symbol:MEOX2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0001757 "somite
specification" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 EMBL:AADN02000860 EMBL:AADN02000861
EMBL:AADN02000862 EMBL:AADN02000863 EMBL:AADN02000864
IPI:IPI00821029 ProteinModelPortal:F6USR4
Ensembl:ENSGALT00000037944 ArrayExpress:F6USR4 Uniprot:F6USR4
Length = 154
Score = 112 (44.5 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 25/66 (37%), Positives = 37/66 (56%)
Query: 91 DHHEDEGGSPRK-KLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQN 149
++ + PRK + TK Q LE F H+ L+ ++ +A L+L RQV+VWFQN
Sbjct: 28 NYKSEVNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQN 87
Query: 150 RRARSK 155
RR + K
Sbjct: 88 RRMKWK 93
>UNIPROTKB|J9P7F8 [details] [associations]
symbol:NOTO "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00680000099625 EMBL:AAEX03010974
Ensembl:ENSCAFT00000046319 OMA:WAPAEEL Uniprot:J9P7F8
Length = 123
Score = 109 (43.4 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 100 PRKKLR--LTKPQFATLEDTF-KEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKL 156
P+K++R Q LE+ F K+H+ + K+ Q LA +LNL QV +WFQNRR + +
Sbjct: 28 PQKRVRTIFNLKQLEELENVFTKQHNLVGKKRAQ-LAARLNLTENQVRIWFQNRRVKYQK 86
Query: 157 KQ 158
+Q
Sbjct: 87 QQ 88
>UNIPROTKB|F1SC87 [details] [associations]
symbol:HHEX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0090009 "primitive
streak formation" evidence=IEA] [GO:0071837 "HMG box domain
binding" evidence=IEA] [GO:0071103 "DNA conformation change"
evidence=IEA] [GO:0070491 "repressing transcription factor binding"
evidence=IEA] [GO:0070365 "hepatocyte differentiation"
evidence=IEA] [GO:0061017 "hepatoblast differentiation"
evidence=IEA] [GO:0061011 "hepatic duct development" evidence=IEA]
[GO:0061010 "gall bladder development" evidence=IEA] [GO:0061009
"common bile duct development" evidence=IEA] [GO:0060431 "primary
lung bud formation" evidence=IEA] [GO:0048853 "forebrain
morphogenesis" evidence=IEA] [GO:0048568 "embryonic organ
development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0035050 "embryonic heart tube development"
evidence=IEA] [GO:0034504 "protein localization to nucleus"
evidence=IEA] [GO:0032993 "protein-DNA complex" evidence=IEA]
[GO:0031016 "pancreas development" evidence=IEA] [GO:0030878
"thyroid gland development" evidence=IEA] [GO:0030183 "B cell
differentiation" evidence=IEA] [GO:0030177 "positive regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0022027
"interkinetic nuclear migration" evidence=IEA] [GO:0016973
"poly(A)+ mRNA export from nucleus" evidence=IEA] [GO:0008301 "DNA
binding, bending" evidence=IEA] [GO:0008190 "eukaryotic initiation
factor 4E binding" evidence=IEA] [GO:0007492 "endoderm development"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0002573 "myeloid leukocyte differentiation" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0007165 GO:GO:0043565 GO:GO:0001701 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122
GO:GO:0008301 GO:GO:0044212 GO:GO:0007049 GO:GO:0030183
GO:GO:0035264 GO:GO:0001570 GO:GO:0031016 GO:GO:0007492
GO:GO:0070365 GO:GO:0030177 GO:GO:0034504 GO:GO:0032993
GO:GO:0048568 GO:GO:0090009 GO:GO:0022027 GO:GO:0035050
GO:GO:0016973 GO:GO:0030878 GeneTree:ENSGT00680000099625
GO:GO:0048853 GO:GO:0061009 CTD:3087 KO:K08024 OMA:DNSCDQR
GO:GO:0071103 GO:GO:0061010 GO:GO:0061011 GO:GO:0061017
GO:GO:0002573 GO:GO:0060431 EMBL:CU467586 RefSeq:NP_001231508.1
UniGene:Ssc.15862 Ensembl:ENSSSCT00000011460 GeneID:397232
KEGG:ssc:397232 Uniprot:F1SC87
Length = 269
Score = 126 (49.4 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 34/93 (36%), Positives = 51/93 (54%)
Query: 90 RDHHEDEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQN 149
R H+ +GG ++R + Q LE F+ LSP +++ LA+ L L RQV+ WFQN
Sbjct: 132 RPLHKRKGG----QVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQN 187
Query: 150 RRAR-SKLKQT------EVECELLKRCCEKLKD 175
RRA+ +LKQ + E E L C++ +D
Sbjct: 188 RRAKWRRLKQENPQNNKKEELESLDNSCDQRQD 220
>UNIPROTKB|E2QXS9 [details] [associations]
symbol:HHEX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0090009
"primitive streak formation" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] [GO:0071103 "DNA conformation change"
evidence=IEA] [GO:0070491 "repressing transcription factor binding"
evidence=IEA] [GO:0070365 "hepatocyte differentiation"
evidence=IEA] [GO:0061017 "hepatoblast differentiation"
evidence=IEA] [GO:0061011 "hepatic duct development" evidence=IEA]
[GO:0061010 "gall bladder development" evidence=IEA] [GO:0061009
"common bile duct development" evidence=IEA] [GO:0060431 "primary
lung bud formation" evidence=IEA] [GO:0048853 "forebrain
morphogenesis" evidence=IEA] [GO:0048568 "embryonic organ
development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0035050 "embryonic heart tube development"
evidence=IEA] [GO:0034504 "protein localization to nucleus"
evidence=IEA] [GO:0032993 "protein-DNA complex" evidence=IEA]
[GO:0031016 "pancreas development" evidence=IEA] [GO:0030878
"thyroid gland development" evidence=IEA] [GO:0030183 "B cell
differentiation" evidence=IEA] [GO:0030177 "positive regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0022027
"interkinetic nuclear migration" evidence=IEA] [GO:0016973
"poly(A)+ mRNA export from nucleus" evidence=IEA] [GO:0008301 "DNA
binding, bending" evidence=IEA] [GO:0008190 "eukaryotic initiation
factor 4E binding" evidence=IEA] [GO:0007492 "endoderm development"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0002573 "myeloid leukocyte differentiation" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0007165 GO:GO:0043565 GO:GO:0001701 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122
GO:GO:0008301 GO:GO:0044212 GO:GO:0007049 GO:GO:0030183
GO:GO:0035264 GO:GO:0001570 GO:GO:0031016 GO:GO:0007492
GO:GO:0070365 GO:GO:0030177 GO:GO:0034504 GO:GO:0032993
GO:GO:0048568 GO:GO:0090009 GO:GO:0022027 GO:GO:0035050
GO:GO:0016973 GO:GO:0030878 GeneTree:ENSGT00680000099625
GO:GO:0048853 GO:GO:0061009 CTD:3087 KO:K08024 OMA:DNSCDQR
GO:GO:0071103 GO:GO:0061010 GO:GO:0061011 GO:GO:0061017
GO:GO:0002573 GO:GO:0060431 EMBL:AAEX03015414 RefSeq:XP_850204.1
Ensembl:ENSCAFT00000012018 GeneID:608175 KEGG:cfa:608175
NextBio:20893846 Uniprot:E2QXS9
Length = 270
Score = 126 (49.4 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 40/107 (37%), Positives = 57/107 (53%)
Query: 90 RDHHEDEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQN 149
R H+ +GG ++R + Q LE F+ LSP +++ LA+ L L RQV+ WFQN
Sbjct: 133 RPLHKRKGG----QVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQN 188
Query: 150 RRAR-SKLKQTEVECELLKRCCEKLKDENKRLQREVQELKSMKLSGA 195
RRA+ +LKQ + K E L +N QR Q+L S + GA
Sbjct: 189 RRAKWRRLKQENPQSNK-KEELESL--DNPCDQR--QDLSSEQNKGA 230
>UNIPROTKB|Q9YH70 [details] [associations]
symbol:Xvent-2B "Xvent-2B protein" species:8355 "Xenopus
laevis" [GO:0005515 "protein binding" evidence=IPI] [GO:0005667
"transcription factor complex" evidence=IPI] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0005667 HSSP:P06602 EMBL:AJ131095 RefSeq:NP_001177334.1
UniGene:Xl.82907 ProteinModelPortal:Q9YH70 SMR:Q9YH70
GeneID:100337598 KEGG:xla:100337598 CTD:100337598
HOVERGEN:HBG067091 Uniprot:Q9YH70
Length = 334
Score = 127 (49.8 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 27/63 (42%), Positives = 38/63 (60%)
Query: 95 DEGGSPRKKLR--LTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRA 152
DE G ++LR T Q +TLE TF++H L +++ LA KL L Q++ WFQNRR
Sbjct: 184 DEEGKMGRRLRTAFTSDQISTLEKTFQKHRYLGASERRKLAAKLQLSEVQIKTWFQNRRM 243
Query: 153 RSK 155
+ K
Sbjct: 244 KHK 246
>TAIR|locus:2028140 [details] [associations]
symbol:PHV "AT1G30490" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009943 "adaxial/abaxial axis specification"
evidence=IMP] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA;IMP] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA;IMP] [GO:0010014 "meristem
initiation" evidence=RCA;IMP] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009880 "embryonic pattern
specification" evidence=IGI] [GO:0080060 "integument development"
evidence=IGI] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010051
"xylem and phloem pattern formation" evidence=RCA] [GO:0010073
"meristem maintenance" evidence=RCA] [GO:0010075 "regulation of
meristem growth" evidence=RCA] [GO:0010090 "trichome morphogenesis"
evidence=RCA] [GO:0045010 "actin nucleation" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0030154 GO:GO:0003677
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 EMBL:AC009917
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010072 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
GO:GO:0009855 GO:GO:0009880 GO:GO:0009944 KO:K09338 HSSP:P10037
HOGENOM:HOG000272677 ProtClustDB:CLSN2679470 GO:GO:0080060
InterPro:IPR013978 Pfam:PF08670 EMBL:Y10922 EMBL:AJ440967
EMBL:AK221046 EMBL:AK226570 IPI:IPI00523245 PIR:H86429
RefSeq:NP_174337.1 UniGene:At.27961 UniGene:At.33151
ProteinModelPortal:O04292 SMR:O04292 IntAct:O04292 STRING:O04292
PRIDE:O04292 EnsemblPlants:AT1G30490.1 GeneID:839928
KEGG:ath:AT1G30490 TAIR:At1g30490 eggNOG:NOG326783
InParanoid:O04292 OMA:ICRSYRI PhylomeDB:O04292
Genevestigator:O04292 Uniprot:O04292
Length = 841
Score = 132 (51.5 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 35/101 (34%), Positives = 51/101 (50%)
Query: 95 DEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKL----NLRPRQVEVWFQNR 150
D+G K +R T Q LE + E S ++Q L + N+ PRQ++VWFQNR
Sbjct: 14 DKGFDSGKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILCNIEPRQIKVWFQNR 73
Query: 151 RARSKLKQTEVECELLKR---CCEKL-KDENKRLQREVQEL 187
R R K ++ + + R KL +EN RLQ++V L
Sbjct: 74 RCREKQRKESARLQTVNRKLSAMNKLLMEENDRLQKQVSNL 114
>TAIR|locus:2129396 [details] [associations]
symbol:HDG4 "AT4G17710" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006944 "cellular membrane fusion" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
EMBL:AL161547 Gene3D:1.10.10.60 SUPFAM:SSF46689 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 HOGENOM:HOG000243256 KO:K09338
HSSP:Q6B2C0 EMBL:Z97344 eggNOG:NOG264325 EMBL:AY133700
IPI:IPI00546205 PIR:B71447 RefSeq:NP_193506.2 UniGene:At.32974
ProteinModelPortal:Q8L7H4 SMR:Q8L7H4 IntAct:Q8L7H4 PaxDb:Q8L7H4
PRIDE:Q8L7H4 EnsemblPlants:AT4G17710.1 GeneID:827492
KEGG:ath:AT4G17710 TAIR:At4g17710 InParanoid:Q8L7H4
PhylomeDB:Q8L7H4 Genevestigator:Q8L7H4 Uniprot:Q8L7H4
Length = 709
Score = 131 (51.2 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 34/94 (36%), Positives = 51/94 (54%)
Query: 94 EDEGGSPRKKL--RLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRR 151
E E + +KK R T Q +E FKE++ K + L++KL L P QV+ WFQN+R
Sbjct: 81 EQEPPAAKKKRYHRHTASQIQQMEALFKENAHPDTKTRLRLSKKLGLSPIQVKFWFQNKR 140
Query: 152 ARSKLKQTEVECELLKRCCEKLKDENKRLQREVQ 185
+ K +Q+ + LK E LK E++ +Q Q
Sbjct: 141 TQIKAQQSRSDNAKLKAENETLKTESQNIQSNFQ 174
>TAIR|locus:2062540 [details] [associations]
symbol:HDG3 "AT2G32370" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048825 "cotyledon development" evidence=IGI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 KO:K09338 eggNOG:NOG261733 GO:GO:0048825
EMBL:AC005700 EMBL:EF988635 IPI:IPI00527257 PIR:C84732
RefSeq:NP_180796.2 UniGene:At.38083 ProteinModelPortal:Q9ZV65
SMR:Q9ZV65 PaxDb:Q9ZV65 PRIDE:Q9ZV65 EnsemblPlants:AT2G32370.1
GeneID:817798 KEGG:ath:AT2G32370 TAIR:At2g32370 InParanoid:A7LBA8
PhylomeDB:Q9ZV65 Genevestigator:Q9ZV65 Uniprot:Q9ZV65
Length = 725
Score = 131 (51.2 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 35/110 (31%), Positives = 56/110 (50%)
Query: 91 DHHEDEGGS--PRKKL----RLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVE 144
+H E G + PR K R T+ Q + +E F+E KQ+ L+ +L L P Q++
Sbjct: 54 NHGEGLGNNQAPRHKKKKYNRHTQLQISEMEAFFRECPHPDDKQRYDLSAQLGLDPVQIK 113
Query: 145 VWFQNRRARSKLKQTEVECELLKRCCEKLKDENKRLQREVQELKSMKLSG 194
WFQN+R ++K +Q E L+ L+ EN+RL+ + + K G
Sbjct: 114 FWFQNKRTQNKNQQERFENSELRNLNNHLRSENQRLREAIHQALCPKCGG 163
>UNIPROTKB|E2RFP2 [details] [associations]
symbol:MEOX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071837 "HMG box domain binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001757 "somite
specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001757
GeneTree:ENSGT00660000095141 CTD:4222 KO:K09322 OMA:QPPAPVW
EMBL:AAEX03006431 RefSeq:XP_848980.1 ProteinModelPortal:E2RFP2
Ensembl:ENSCAFT00000022993 GeneID:607271 KEGG:cfa:607271
NextBio:20893009 Uniprot:E2RFP2
Length = 254
Score = 119 (46.9 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 28/62 (45%), Positives = 37/62 (59%)
Query: 96 EGGSPRKKLR--LTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRAR 153
EGGS +K R TK Q LE F H+ L+ ++ +A L+L RQV+VWFQNRR +
Sbjct: 166 EGGSKARKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQVKVWFQNRRMK 225
Query: 154 SK 155
K
Sbjct: 226 WK 227
Score = 37 (18.1 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 50 SENTLKSATKEKESTD 65
SE KS+ ++KES+D
Sbjct: 142 SEMEKKSSRRKKESSD 157
>ZFIN|ZDB-GENE-980526-299 [details] [associations]
symbol:hhex "hematopoietically expressed homeobox"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IMP] [GO:0060217 "hemangioblast cell differentiation"
evidence=IMP] [GO:0045603 "positive regulation of endothelial cell
differentiation" evidence=IMP] [GO:0035162 "embryonic hemopoiesis"
evidence=IMP] [GO:0007507 "heart development" evidence=IMP]
[GO:0030878 "thyroid gland development" evidence=IMP] [GO:0046620
"regulation of organ growth" evidence=IMP] [GO:0009952
"anterior/posterior pattern specification" evidence=ISS]
[GO:0001889 "liver development" evidence=IMP] [GO:0048565
"digestive tract development" evidence=IMP] [GO:0007368
"determination of left/right symmetry" evidence=IMP] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980526-299 GO:GO:0005634 GO:GO:0007507 GO:GO:0009952
GO:GO:0043565 GO:GO:0001889 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0045603 GO:GO:0007368 GO:GO:0009953
GO:GO:0048565 GO:GO:0035162 eggNOG:NOG252905 GO:GO:0046620
GO:GO:0030878 CTD:3087 HOVERGEN:HBG055460 KO:K08024
OrthoDB:EOG4XKV7W EMBL:AF131070 IPI:IPI00485854 RefSeq:NP_571009.1
UniGene:Dr.79053 HSSP:P22808 ProteinModelPortal:Q9IAV3 SMR:Q9IAV3
STRING:Q9IAV3 GeneID:30098 KEGG:dre:30098 NextBio:20806580
Uniprot:Q9IAV3
Length = 228
Score = 122 (48.0 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 38/107 (35%), Positives = 56/107 (52%)
Query: 90 RDHHEDEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQN 149
R H+ +GG ++R + Q LE F+ LSP +++ LA+ L L RQV+ WFQN
Sbjct: 112 RPLHKRKGG----QVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQN 167
Query: 150 RRAR-SKLKQTEVECELLKRCCEKLKDENKRLQREVQELKSMKLSGA 195
RRA+ +LKQ E KR E + +RL + ++ SGA
Sbjct: 168 RRAKWRRLKQ-ENPPSTGKREAED--SDTRRLSDAAARARELE-SGA 210
>TAIR|locus:2145116 [details] [associations]
symbol:HDG7 "AT5G52170" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 eggNOG:euNOG18333
HOGENOM:HOG000243256 HSSP:Q6B2C0 EMBL:AB025603 IPI:IPI00525258
RefSeq:NP_200030.1 UniGene:At.55500 ProteinModelPortal:Q9LTK3
SMR:Q9LTK3 EnsemblPlants:AT5G52170.1 GeneID:835293
KEGG:ath:AT5G52170 TAIR:At5g52170 InParanoid:Q9LTK3
PhylomeDB:Q9LTK3 Genevestigator:Q9LTK3 Uniprot:Q9LTK3
Length = 682
Score = 131 (51.2 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 37/102 (36%), Positives = 53/102 (51%)
Query: 100 PRKKLRLTKP------QFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRAR 153
P+KK R TK Q LE FKE + KQ+ L +KL L +Q++ WFQNRR +
Sbjct: 52 PKKKKRKTKYHRHTSYQIQELESFFKECPHPNEKQRLELGKKLTLESKQIKFWFQNRRTQ 111
Query: 154 SKLKQTEVECELLKRCCEKLKDENKRLQREVQELKSMKLSGA 195
K + E +LK+ EKL+ EN L+ ++ + GA
Sbjct: 112 MKTQLERHENVILKQENEKLRLENSFLKESMRGSLCIDCGGA 153
Score = 35 (17.4 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 42 PSLTLGRRSENTLKSATKEKESTDVL 67
PS LG+ ++ +S + +S D +
Sbjct: 16 PSFFLGKLKDDEFESRSLSDDSFDAM 41
>RGD|619932 [details] [associations]
symbol:Hhex "hematopoietically expressed homeobox" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0001570 "vasculogenesis" evidence=IEA;ISO] [GO:0001701 "in
utero embryonic development" evidence=IEA;ISO] [GO:0001889 "liver
development" evidence=ISO] [GO:0002009 "morphogenesis of an
epithelium" evidence=ISO] [GO:0002573 "myeloid leukocyte
differentiation" evidence=IEA;ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=ISO;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006406 "mRNA export from
nucleus" evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA;ISO]
[GO:0007165 "signal transduction" evidence=IEA;ISO] [GO:0007492
"endoderm development" evidence=IEA;ISO] [GO:0008134 "transcription
factor binding" evidence=ISO] [GO:0008190 "eukaryotic initiation
factor 4E binding" evidence=IEA;ISO] [GO:0008283 "cell
proliferation" evidence=ISO] [GO:0008301 "DNA binding, bending"
evidence=IEA;ISO] [GO:0009611 "response to wounding" evidence=IEP]
[GO:0009887 "organ morphogenesis" evidence=ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=ISO]
[GO:0016525 "negative regulation of angiogenesis" evidence=ISO;IDA]
[GO:0016973 "poly(A)+ mRNA export from nucleus" evidence=IEA;ISO]
[GO:0022027 "interkinetic nuclear migration" evidence=IEA;ISO]
[GO:0030097 "hemopoiesis" evidence=ISO;TAS] [GO:0030154 "cell
differentiation" evidence=IDA] [GO:0030177 "positive regulation of
Wnt receptor signaling pathway" evidence=IEA;ISO] [GO:0030183 "B
cell differentiation" evidence=IEA;ISO] [GO:0030878 "thyroid gland
development" evidence=IEA;ISO] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0030948 "negative regulation of vascular
endothelial growth factor receptor signaling pathway"
evidence=ISO;IDA] [GO:0031016 "pancreas development"
evidence=IEA;ISO] [GO:0032993 "protein-DNA complex"
evidence=IEA;ISO] [GO:0034504 "protein localization to nucleus"
evidence=IEA;ISO] [GO:0035050 "embryonic heart tube development"
evidence=IEA;ISO] [GO:0035264 "multicellular organism growth"
evidence=IEA;ISO] [GO:0042127 "regulation of cell proliferation"
evidence=IEA;ISO] [GO:0042803 "protein homodimerization activity"
evidence=IEA;ISO] [GO:0043434 "response to peptide hormone
stimulus" evidence=IEP] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO;IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO;IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA;ISO] [GO:0048568 "embryonic organ
development" evidence=IEA;ISO] [GO:0048729 "tissue morphogenesis"
evidence=ISO] [GO:0048853 "forebrain morphogenesis"
evidence=IEA;ISO] [GO:0060431 "primary lung bud formation"
evidence=IEA;ISO] [GO:0061009 "common bile duct development"
evidence=IEA;ISO] [GO:0061010 "gall bladder development"
evidence=IEA;ISO] [GO:0061011 "hepatic duct development"
evidence=IEA;ISO] [GO:0061017 "hepatoblast differentiation"
evidence=IEA;ISO] [GO:0070365 "hepatocyte differentiation"
evidence=IEA;ISO] [GO:0070491 "repressing transcription factor
binding" evidence=IEA;ISO] [GO:0071103 "DNA conformation change"
evidence=IEA;ISO] [GO:0071837 "HMG box domain binding"
evidence=IEA;ISO] [GO:0090009 "primitive streak formation"
evidence=IEA;ISO] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:619932 GO:GO:0005634 GO:GO:0005737 GO:GO:0007165
GO:GO:0030154 GO:GO:0009611 GO:GO:0043565 GO:GO:0001701
GO:GO:0043434 GO:GO:0045944 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0042127 GO:GO:0000122 GO:GO:0008301 GO:GO:0044212
GO:GO:0007049 GO:GO:0030183 GO:GO:0035264 GO:GO:0030097
GO:GO:0001570 GO:GO:0016525 GO:GO:0031016 GO:GO:0007492
GO:GO:0070365 GO:GO:0030177 eggNOG:NOG252905 GO:GO:0034504
GO:GO:0032993 GO:GO:0048568 GO:GO:0090009 GO:GO:0030948
GO:GO:0022027 GO:GO:0035050 GO:GO:0016973 GO:GO:0030878
EMBL:CH473953 GeneTree:ENSGT00680000099625 GO:GO:0048853
GO:GO:0061009 CTD:3087 HOGENOM:HOG000049110 HOVERGEN:HBG055460
KO:K08024 OrthoDB:EOG4XKV7W HSSP:P22808 OMA:DNSCDQR GO:GO:0071103
GO:GO:0061010 GO:GO:0061011 GO:GO:0061017 GO:GO:0002573
GO:GO:0060431 EMBL:BC088135 EMBL:D86383 IPI:IPI00211318
RefSeq:NP_077361.1 UniGene:Rn.12188 SMR:Q9WV22 STRING:Q9WV22
Ensembl:ENSRNOT00000022384 GeneID:79237 KEGG:rno:79237
UCSC:RGD:619932 InParanoid:Q9WV22 NextBio:614664
Genevestigator:Q9WV22 Uniprot:Q9WV22
Length = 271
Score = 123 (48.4 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 38/114 (33%), Positives = 58/114 (50%)
Query: 90 RDHHEDEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQN 149
R H+ +GG ++R + Q LE F+ LSP +++ LA+ L L RQV+ WFQN
Sbjct: 133 RPLHKRKGG----QVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQN 188
Query: 150 RRAR-SKLKQTEV------ECELLKRCCEKLKDENKRLQREVQELKSMKLSGAP 196
RRA+ +LKQ E + L C++ +D Q + L S + S +P
Sbjct: 189 RRAKWRRLKQENPQSNKKDELDSLDTSCDQGQDLPSE-QNKGASLDSSQCSPSP 241
>UNIPROTKB|E9PLE6 [details] [associations]
symbol:NANOGP1 "Putative homeobox protein NANOG2"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 HGNC:HGNC:23099 EMBL:AC007536
EMBL:AC124891 IPI:IPI00978033 ProteinModelPortal:E9PLE6 SMR:E9PLE6
Ensembl:ENST00000525030 ArrayExpress:E9PLE6 Bgee:E9PLE6
Uniprot:E9PLE6
Length = 132
Score = 105 (42.0 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 94 EDEGGSPRKKLR--LTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRR 151
ED+ ++K R + Q L D F+ LS +Q Q L+ LNL +QV+ WFQN+R
Sbjct: 49 EDKVPVKKQKTRTVFSSTQLCVLNDRFQRQKYLSLQQMQELSNILNLSYKQVKTWFQNQR 108
Query: 152 ARSK 155
+SK
Sbjct: 109 MKSK 112
>UNIPROTKB|F6VMK5 [details] [associations]
symbol:NKX3-1 "Uncharacterized protein" species:9796 "Equus
caballus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=ISS] [GO:0000988 "protein
binding transcription factor activity" evidence=ISS] [GO:0001047
"core promoter binding" evidence=ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0004882 "androgen receptor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISS] [GO:0007431 "salivary gland
development" evidence=ISS] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISS] [GO:0008285 "negative regulation of
cell proliferation" evidence=ISS] [GO:0010628 "positive regulation
of gene expression" evidence=ISS] [GO:0010942 "positive regulation
of cell death" evidence=ISS] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISS] [GO:0030284
"estrogen receptor activity" evidence=ISS] [GO:0030295 "protein
kinase activator activity" evidence=ISS] [GO:0030331 "estrogen
receptor binding" evidence=ISS] [GO:0030521 "androgen receptor
signaling pathway" evidence=ISS] [GO:0033574 "response to
testosterone stimulus" evidence=ISS] [GO:0043280 "positive
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISS] [GO:0043491 "protein kinase B
signaling cascade" evidence=ISS] [GO:0043569 "negative regulation
of insulin-like growth factor receptor signaling pathway"
evidence=ISS] [GO:0043621 "protein self-association" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045931 "positive regulation of
mitotic cell cycle" evidence=ISS] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0048754 "branching morphogenesis of an epithelial tube"
evidence=ISS] [GO:0050680 "negative regulation of epithelial cell
proliferation" evidence=ISS] [GO:0051781 "positive regulation of
cell division" evidence=ISS] [GO:0060442 "branching involved in
prostate gland morphogenesis" evidence=ISS] [GO:0060664 "epithelial
cell proliferation involved in salivary gland morphogenesis"
evidence=ISS] [GO:0060770 "negative regulation of epithelial cell
proliferation involved in prostate gland development" evidence=ISS]
[GO:0071383 "cellular response to steroid hormone stimulus"
evidence=ISS] [GO:0071899 "negative regulation of estrogen receptor
binding" evidence=ISS] [GO:2000836 "positive regulation of androgen
secretion" evidence=ISS] [GO:2001022 "positive regulation of
response to DNA damage stimulus" evidence=ISS] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045892 GO:GO:0007507
GO:GO:0045931 GO:GO:0008284 GO:GO:0051781 GO:GO:0045944
GO:GO:0071456 GO:GO:0014068 GO:GO:0030295 GO:GO:0043621
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0008584 GO:GO:0001756 GO:GO:0006919 GO:GO:0035690
GO:GO:0010942 GO:GO:0060037 GO:GO:0033574 GO:GO:0001047
GO:GO:0008656 GO:GO:0043491 GO:GO:0000976 GO:GO:0004882
GO:GO:0071347 GO:GO:0071356 GO:GO:0030331 GO:GO:0000983
GO:GO:0060770 GO:GO:0001656 GO:GO:2001244 GO:GO:0043569
GO:GO:0048754 GeneTree:ENSGT00700000104206 GO:GO:0045930
GO:GO:2001022 GO:GO:0060442 GO:GO:0071850 GO:GO:0000988
GO:GO:0030284 GO:GO:0060664 GO:GO:0071899 GO:GO:0035907
GO:GO:2000836 OMA:YCLGGWN Ensembl:ENSECAT00000001320 Uniprot:F6VMK5
Length = 142
Score = 105 (42.0 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 28/81 (34%), Positives = 42/81 (51%)
Query: 100 PRKKLR--LTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLK 157
P+K+ R + Q LE F LS ++ LA+ L L QV++WFQNRR ++K K
Sbjct: 31 PQKRSRAAFSHTQVIELERKFSRQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKRK 90
Query: 158 QTEVECELLKR--CCEKLKDE 176
Q + L++ LK+E
Sbjct: 91 QLSSDLGNLEKPSSLPALKEE 111
>UNIPROTKB|Q0P5C3 [details] [associations]
symbol:MSX2 "Homeobox protein MSX-2" species:9913 "Bos
taurus" [GO:0044212 "transcription regulatory region DNA binding"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0001649 "osteoblast
differentiation" evidence=ISS] [GO:2000678 "negative regulation of
transcription regulatory region DNA binding" evidence=IEA]
[GO:0071392 "cellular response to estradiol stimulus" evidence=IEA]
[GO:0071363 "cellular response to growth factor stimulus"
evidence=IEA] [GO:0070166 "enamel mineralization" evidence=IEA]
[GO:0061312 "BMP signaling pathway involved in heart development"
evidence=IEA] [GO:0060444 "branching involved in mammary gland duct
morphogenesis" evidence=IEA] [GO:0060364 "frontal suture
morphogenesis" evidence=IEA] [GO:0060346 "bone trabecula formation"
evidence=IEA] [GO:0051795 "positive regulation of catagen"
evidence=IEA] [GO:0048863 "stem cell differentiation" evidence=IEA]
[GO:0045669 "positive regulation of osteoblast differentiation"
evidence=IEA] [GO:0045617 "negative regulation of keratinocyte
differentiation" evidence=IEA] [GO:0045599 "negative regulation of
fat cell differentiation" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0042640 "anagen"
evidence=IEA] [GO:0035880 "embryonic nail plate morphogenesis"
evidence=IEA] [GO:0035313 "wound healing, spreading of epidermal
cells" evidence=IEA] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IEA] [GO:0035115 "embryonic forelimb morphogenesis"
evidence=IEA] [GO:0032792 "negative regulation of CREB
transcription factor activity" evidence=IEA] [GO:0030513 "positive
regulation of BMP signaling pathway" evidence=IEA] [GO:0023019
"signal transduction involved in regulation of gene expression"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0008285 "negative regulation of
cell proliferation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0003416 "endochondral bone growth" evidence=IEA]
[GO:0003198 "epithelial to mesenchymal transition involved in
endocardial cushion formation" evidence=IEA] [GO:0003148 "outflow
tract septum morphogenesis" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0002063 "chondrocyte development"
evidence=IEA] [GO:0000989 "transcription factor binding
transcription factor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005737 GO:GO:0045892
GO:GO:0043066 GO:GO:0008285 GO:GO:0071363 GO:GO:0009952
GO:GO:0043565 GO:GO:0048863 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0000122 GO:GO:0044212 GO:GO:0002076
GO:GO:0030513 GO:GO:0035313 GO:GO:0045669 GO:GO:0045599
GO:GO:0035116 GO:GO:0042640 GO:GO:0001649 GO:GO:0035115
GO:GO:0070166 GO:GO:0071392 GO:GO:0000989 GO:GO:0023019
GO:GO:0060444 GO:GO:0002063 GO:GO:0060346 GO:GO:0032792
GO:GO:0003416 GeneTree:ENSGT00700000104129 GO:GO:0003148
GO:GO:0003198 GO:GO:2000678 GO:GO:0060364 eggNOG:NOG298790
HOGENOM:HOG000231922 HOVERGEN:HBG005205 KO:K09341 OrthoDB:EOG4HQDK0
GO:GO:0045617 GO:GO:0061312 GO:GO:0035880 EMBL:BC120248
IPI:IPI00712037 RefSeq:NP_001073082.1 UniGene:Bt.102117
ProteinModelPortal:Q0P5C3 SMR:Q0P5C3 STRING:Q0P5C3
Ensembl:ENSBTAT00000018417 GeneID:540230 KEGG:bta:540230 CTD:4488
InParanoid:Q0P5C3 OMA:PKEASPR NextBio:20878504 GO:GO:0051795
Uniprot:Q0P5C3
Length = 267
Score = 122 (48.0 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 39/120 (32%), Positives = 56/120 (46%)
Query: 89 IRDHHEDEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQ 148
+R H + PR T Q LE F++ LS ++ + LNL QV++WFQ
Sbjct: 136 LRKHKTNR--KPRTPF--TTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQ 191
Query: 149 NRRARSKLKQTEVECELLKRCCEKLKDENKRLQREVQE-LKSMKLSGA--PLYMK-LPAP 204
NRRA++K Q E E E LK + + L + L++ L GA P + LP P
Sbjct: 192 NRRAKAKRLQ-EAELEKLKMAAKPMLPSGFSLPFPINSPLQAASLYGASYPFHRPVLPIP 250
>ZFIN|ZDB-GENE-050417-212 [details] [associations]
symbol:barhl1a "BarH-like 1a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-050417-212
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104206 HOVERGEN:HBG050663 EMBL:BX276128
EMBL:AY596187 IPI:IPI00627489 UniGene:Dr.110809 SMR:Q53B63
Ensembl:ENSDART00000051474 OMA:PERIPKK Uniprot:Q53B63
Length = 299
Score = 123 (48.4 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 32/78 (41%), Positives = 41/78 (52%)
Query: 90 RDHHEDEGGSPRK-KLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQ 148
RD PRK + T Q A LE +F+ LS + + LA LNL QV+ W+Q
Sbjct: 145 RDSPNSRLKKPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQ 204
Query: 149 NRRARSKLKQTEVECELL 166
NRR + K +QT V ELL
Sbjct: 205 NRRTKWK-RQTAVGLELL 221
>WB|WBGene00000445 [details] [associations]
symbol:ceh-22 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0043282 "pharyngeal muscle
development" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0006898 GO:GO:0040010 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:Z73974 GO:GO:0043282
EMBL:U10080 EMBL:U10081 PIR:T21552 RefSeq:NP_001076742.1
UniGene:Cel.19760 ProteinModelPortal:P41936 SMR:P41936
STRING:P41936 PaxDb:P41936 GeneID:179485 KEGG:cel:CELE_F29F11.5
UCSC:F29F11.5a CTD:179485 WormBase:F29F11.5a eggNOG:NOG310976
HOGENOM:HOG000217930 InParanoid:P41936 NextBio:905598
ArrayExpress:P41936 Uniprot:P41936
Length = 346
Score = 124 (48.7 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 27/71 (38%), Positives = 40/71 (56%)
Query: 94 EDEGGSPRKKLR----LTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQN 149
ED+G RKK + TK Q LE F+ LS +++ LA ++ L P QV++WFQN
Sbjct: 180 EDDGTGKRKKRKRRVLFTKAQTYELERRFRSQKYLSAPEREALAMQIRLTPTQVKIWFQN 239
Query: 150 RRARSKLKQTE 160
R ++K T+
Sbjct: 240 HRYKTKKSHTD 250
>MGI|MGI:96086 [details] [associations]
symbol:Hhex "hematopoietically expressed homeobox"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0001570 "vasculogenesis" evidence=IMP] [GO:0001701 "in utero
embryonic development" evidence=IMP] [GO:0001889 "liver
development" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0002573 "myeloid leukocyte
differentiation" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0006406 "mRNA export from nucleus"
evidence=ISO] [GO:0007049 "cell cycle" evidence=ISO] [GO:0007165
"signal transduction" evidence=IMP] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007492 "endoderm
development" evidence=IMP] [GO:0008134 "transcription factor
binding" evidence=ISO] [GO:0008190 "eukaryotic initiation factor 4E
binding" evidence=ISO] [GO:0008283 "cell proliferation"
evidence=ISO] [GO:0008301 "DNA binding, bending" evidence=ISO]
[GO:0009887 "organ morphogenesis" evidence=IMP] [GO:0009952
"anterior/posterior pattern specification" evidence=IMP]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0016525 "negative regulation of angiogenesis" evidence=ISO;IDA]
[GO:0016973 "poly(A)+ mRNA export from nucleus" evidence=ISO]
[GO:0022027 "interkinetic nuclear migration" evidence=IMP]
[GO:0030097 "hemopoiesis" evidence=IMP] [GO:0030154 "cell
differentiation" evidence=ISO] [GO:0030177 "positive regulation of
Wnt receptor signaling pathway" evidence=IMP] [GO:0030183 "B cell
differentiation" evidence=IMP] [GO:0030878 "thyroid gland
development" evidence=IMP] [GO:0030900 "forebrain development"
evidence=IMP] [GO:0030948 "negative regulation of vascular
endothelial growth factor receptor signaling pathway"
evidence=ISO;IDA] [GO:0031016 "pancreas development" evidence=IMP]
[GO:0032993 "protein-DNA complex" evidence=ISO] [GO:0034504
"protein localization to nucleus" evidence=ISO] [GO:0035050
"embryonic heart tube development" evidence=IMP] [GO:0035264
"multicellular organism growth" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=ISO] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0048568
"embryonic organ development" evidence=IMP] [GO:0048729 "tissue
morphogenesis" evidence=IMP] [GO:0048853 "forebrain morphogenesis"
evidence=IMP] [GO:0060431 "primary lung bud formation"
evidence=IMP] [GO:0061009 "common bile duct development"
evidence=IMP] [GO:0061010 "gall bladder development" evidence=IMP]
[GO:0061011 "hepatic duct development" evidence=IMP] [GO:0061017
"hepatoblast differentiation" evidence=IMP] [GO:0070365 "hepatocyte
differentiation" evidence=IMP] [GO:0070491 "repressing
transcription factor binding" evidence=ISO] [GO:0071103 "DNA
conformation change" evidence=ISO] [GO:0071837 "HMG box domain
binding" evidence=IPI] [GO:0090009 "primitive streak formation"
evidence=IGI;IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:96086 GO:GO:0005634 GO:GO:0005737
GO:GO:0007165 GO:GO:0009611 GO:GO:0016055 GO:GO:0043565
GO:GO:0001701 GO:GO:0043434 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122
GO:GO:0008301 GO:GO:0044212 GO:GO:0007049 GO:GO:0030183
GO:GO:0035264 GO:GO:0001570 GO:GO:0016525 GO:GO:0031016
GO:GO:0007492 GO:GO:0070365 GO:GO:0030177 eggNOG:NOG252905
GO:GO:0034504 GO:GO:0032993 GO:GO:0048568 GO:GO:0090009
GO:GO:0030948 GO:GO:0022027 GO:GO:0035050 GO:GO:0016973
GO:GO:0030878 GeneTree:ENSGT00680000099625 GO:GO:0048853
GO:GO:0061009 CTD:3087 HOGENOM:HOG000049110 HOVERGEN:HBG055460
KO:K08024 OrthoDB:EOG4XKV7W OMA:DNSCDQR GO:GO:0071103 GO:GO:0061010
GO:GO:0061011 GO:GO:0061017 GO:GO:0002573 GO:GO:0060431 EMBL:Z21524
EMBL:AB017132 EMBL:AF132550 EMBL:AK014111 EMBL:AK033664
EMBL:BC057986 IPI:IPI00474062 PIR:S30230 RefSeq:NP_032271.1
UniGene:Mm.33896 ProteinModelPortal:P43120 SMR:P43120 STRING:P43120
PhosphoSite:P43120 PRIDE:P43120 Ensembl:ENSMUST00000025944
GeneID:15242 KEGG:mmu:15242 UCSC:uc008hio.1 InParanoid:P43120
NextBio:287843 Bgee:P43120 CleanEx:MM_HHEX Genevestigator:P43120
GermOnline:ENSMUSG00000024986 Uniprot:P43120
Length = 271
Score = 122 (48.0 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 29/70 (41%), Positives = 42/70 (60%)
Query: 90 RDHHEDEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQN 149
R H+ +GG ++R + Q LE F+ LSP +++ LA+ L L RQV+ WFQN
Sbjct: 133 RPLHKRKGG----QVRFSNDQTVELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQN 188
Query: 150 RRAR-SKLKQ 158
RRA+ +LKQ
Sbjct: 189 RRAKWRRLKQ 198
>WB|WBGene00000446 [details] [associations]
symbol:ceh-23 species:6239 "Caenorhabditis elegans"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 EMBL:FO080278
eggNOG:NOG257690 GeneTree:ENSGT00680000099625 EMBL:L19249
PIR:S44907 RefSeq:NP_498700.1 ProteinModelPortal:P34663 SMR:P34663
STRING:P34663 EnsemblMetazoa:ZK652.5 GeneID:176096
KEGG:cel:CELE_ZK652.5 UCSC:ZK652.5 CTD:176096 WormBase:ZK652.5
HOGENOM:HOG000076961 InParanoid:P34663 OMA:KARTIYG NextBio:891100
Uniprot:P34663
Length = 305
Score = 123 (48.4 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 28/81 (34%), Positives = 47/81 (58%)
Query: 110 QFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLKQTEVE-CELLKR 168
Q LED FK + +++ LA++L L P QV +WFQNRR++ + KQ E + L+
Sbjct: 222 QTQQLEDMFKGQMYVVGAERENLAQRLGLSPSQVRIWFQNRRSKHRRKQQEEQQSTTLEE 281
Query: 169 CCEKL-KDENKRLQREVQELK 188
E++ KDE + + + ++K
Sbjct: 282 KSEEIGKDEEEDDEEDEDDVK 302
>UNIPROTKB|O43364 [details] [associations]
symbol:HOXA2 "Homeobox protein Hox-A2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0001709 "cell fate determination" evidence=IEA] [GO:0002076
"osteoblast development" evidence=IEA] [GO:0007379 "segment
specification" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0021568 "rhombomere 2 development"
evidence=IEA] [GO:0021658 "rhombomere 3 morphogenesis"
evidence=IEA] [GO:0035284 "brain segmentation" evidence=IEA]
[GO:0042474 "middle ear morphogenesis" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048703 "embryonic viscerocranium
morphogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 EMBL:CH471073
GO:GO:0043565 GO:GO:0045944 GO:GO:0045665 GO:GO:0003700
GO:GO:0006351 EMBL:CH236948 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0008045
GO:GO:0002076 GO:GO:0007379 GO:GO:0009953 GO:GO:0001709
eggNOG:NOG321520 GO:GO:0035284 GO:GO:0048703 GO:GO:0042474
GO:GO:0021568 KO:K09302 EMBL:AC004079 HOGENOM:HOG000063664
HOVERGEN:HBG006088 OrthoDB:EOG43TZVT CTD:3199 EMBL:BC130571
EMBL:BC136500 IPI:IPI00012049 RefSeq:NP_006726.1 UniGene:Hs.445239
UniGene:Hs.592177 ProteinModelPortal:O43364 SMR:O43364
STRING:O43364 PhosphoSite:O43364 PRIDE:O43364
Ensembl:ENST00000222718 GeneID:3199 KEGG:hsa:3199 UCSC:uc003syh.3
GeneCards:GC07M027106 HGNC:HGNC:5103 HPA:HPA029774 MIM:604685
MIM:612290 neXtProt:NX_O43364 Orphanet:93976 Orphanet:140963
PharmGKB:PA29380 InParanoid:O43364 OMA:NCGSGLN PhylomeDB:O43364
GenomeRNAi:3199 NextBio:12724 Bgee:O43364 CleanEx:HS_HOXA2
Genevestigator:O43364 GermOnline:ENSG00000105996 GO:GO:0021658
Uniprot:O43364
Length = 376
Score = 124 (48.7 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 36/105 (34%), Positives = 57/105 (54%)
Query: 97 GGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKL 156
GGS R + T Q LE F + L ++ +A L+L RQV+VWFQNRR + K
Sbjct: 141 GGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHK- 199
Query: 157 KQTEV-ECELLKRCCEKLKDENKRLQREVQEL---KSMKLSGAPL 197
+QT+ E + + C+ L+D K + E ++ +++ +SGA L
Sbjct: 200 RQTQCKENQNSEGKCKSLEDSEKVEEDEEEKTLFEQALSVSGALL 244
>WB|WBGene00003102 [details] [associations]
symbol:mab-5 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0042659 "regulation of cell fate specification" evidence=IMP]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0051179 "localization" evidence=IMP]
[GO:0050679 "positive regulation of epithelial cell proliferation"
evidence=IMP] [GO:0045138 "tail tip morphogenesis"
evidence=IGI;IMP] [GO:0030334 "regulation of cell migration"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 KO:K09311 GO:GO:0000122
GO:GO:0030334 GO:GO:0045138 eggNOG:NOG238660 GO:GO:0050679
GO:GO:0042659 GO:GO:0051179 EMBL:FO080429
GeneTree:ENSGT00700000104189 EMBL:M22751 EMBL:AF277990 PIR:S44615
RefSeq:NP_498695.1 UniGene:Cel.18387 ProteinModelPortal:P10038
SMR:P10038 IntAct:P10038 MINT:MINT-1123728 STRING:P10038
EnsemblMetazoa:C08C3.3 GeneID:176091 KEGG:cel:CELE_C08C3.3
UCSC:C08C3.3 CTD:176091 WormBase:C08C3.3 InParanoid:P10038
OMA:TSANFGE NextBio:891072 Uniprot:P10038
Length = 200
Score = 118 (46.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 26/66 (39%), Positives = 40/66 (60%)
Query: 97 GGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKL 156
G S R + ++ Q LE F H L+ K++Q ++E L+L RQV++WFQNRR + K
Sbjct: 115 GESKRTRQTYSRSQTLELEKEFHYHKYLTRKRRQEISETLHLTERQVKIWFQNRRMKHK- 173
Query: 157 KQTEVE 162
K+ + E
Sbjct: 174 KEAKGE 179
>UNIPROTKB|O95231 [details] [associations]
symbol:VENTX "Homeobox protein VENTX" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:Q6B2C0 EMBL:AL445199
eggNOG:NOG150160 OrthoDB:EOG44TP97 EMBL:AF068006 EMBL:AF288039
EMBL:BC108915 EMBL:BC108916 IPI:IPI00004447 RefSeq:NP_055283.1
UniGene:Hs.125231 ProteinModelPortal:O95231 SMR:O95231
STRING:O95231 PaxDb:O95231 PRIDE:O95231 DNASU:27287
Ensembl:ENST00000325980 GeneID:27287 KEGG:hsa:27287 UCSC:uc010quy.1
CTD:27287 GeneCards:GC10P135051 H-InvDB:HIX0036778 HGNC:HGNC:13639
MIM:607158 neXtProt:NX_O95231 PharmGKB:PA37803 HOGENOM:HOG000154815
InParanoid:O95231 OMA:DWLSQSS PhylomeDB:O95231 GenomeRNAi:27287
NextBio:50228 Bgee:O95231 CleanEx:HS_VENTX Genevestigator:O95231
Uniprot:O95231
Length = 258
Score = 121 (47.7 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 99 SPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSK 155
+PR + T Q TLE F+ H LSP +++ LA ++ L Q++ WFQNRR + K
Sbjct: 91 APRVRTAFTMEQVRTLEGVFQHHQYLSPLERKRLAREMQLSEVQIKTWFQNRRMKHK 147
>UNIPROTKB|F1PRX2 [details] [associations]
symbol:NKX3-1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0010942 "positive
regulation of cell death" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0043491 "protein kinase B signaling cascade"
evidence=ISS] [GO:0004882 "androgen receptor activity"
evidence=ISS] [GO:0071383 "cellular response to steroid hormone
stimulus" evidence=ISS] [GO:2000836 "positive regulation of
androgen secretion" evidence=ISS] [GO:2001022 "positive regulation
of response to DNA damage stimulus" evidence=ISS] [GO:0030521
"androgen receptor signaling pathway" evidence=ISS] [GO:0014068
"positive regulation of phosphatidylinositol 3-kinase cascade"
evidence=ISS] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISS] [GO:0043621 "protein self-association"
evidence=ISS] [GO:0030331 "estrogen receptor binding" evidence=ISS]
[GO:0030284 "estrogen receptor activity" evidence=ISS] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=ISS] [GO:0071899 "negative regulation of estrogen receptor
binding" evidence=ISS] [GO:0051781 "positive regulation of cell
division" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=ISS] [GO:0008285
"negative regulation of cell proliferation" evidence=ISS]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISS] [GO:0007431 "salivary
gland development" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0060770 "negative regulation of epithelial cell
proliferation involved in prostate gland development" evidence=ISS]
[GO:0060664 "epithelial cell proliferation involved in salivary
gland morphogenesis" evidence=ISS] [GO:0060442 "branching involved
in prostate gland morphogenesis" evidence=ISS] [GO:0050680
"negative regulation of epithelial cell proliferation"
evidence=ISS] [GO:0048754 "branching morphogenesis of an epithelial
tube" evidence=ISS] [GO:0043569 "negative regulation of
insulin-like growth factor receptor signaling pathway"
evidence=ISS] [GO:0033574 "response to testosterone stimulus"
evidence=ISS] [GO:0043280 "positive regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0030295 "protein kinase activator activity" evidence=ISS]
[GO:0001047 "core promoter binding" evidence=ISS] [GO:0000988
"protein binding transcription factor activity" evidence=ISS]
[GO:0010628 "positive regulation of gene expression" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:0097162 "MADS box domain binding" evidence=IEA]
[GO:0071850 "mitotic cell cycle arrest" evidence=IEA] [GO:0071456
"cellular response to hypoxia" evidence=IEA] [GO:0071356 "cellular
response to tumor necrosis factor" evidence=IEA] [GO:0071347
"cellular response to interleukin-1" evidence=IEA] [GO:0060037
"pharyngeal system development" evidence=IEA] [GO:0045930 "negative
regulation of mitotic cell cycle" evidence=IEA] [GO:0042826
"histone deacetylase binding" evidence=IEA] [GO:0035907 "dorsal
aorta development" evidence=IEA] [GO:0035690 "cellular response to
drug" evidence=IEA] [GO:0008656 "cysteine-type endopeptidase
activator activity involved in apoptotic process" evidence=IEA]
[GO:0008584 "male gonad development" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007507 "heart
development" evidence=IEA] [GO:0001756 "somitogenesis"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0000983 "RNA polymerase II core promoter sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0045892 GO:GO:0007507 GO:GO:0045931
GO:GO:0008284 GO:GO:0051781 GO:GO:0045944 GO:GO:0071456
GO:GO:0014068 GO:GO:0030295 GO:GO:0043621 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0008584
GO:GO:0001756 GO:GO:0006919 GO:GO:0035690 GO:GO:0010942
GO:GO:0060037 GO:GO:0033574 GO:GO:0001047 GO:GO:0008656
GO:GO:0043491 GO:GO:0000976 GO:GO:0004882 GO:GO:0071347
GO:GO:0071356 GO:GO:0030331 GO:GO:0000983 GO:GO:0060770
GO:GO:0001656 GO:GO:2001244 GO:GO:0043569 GO:GO:0048754
GeneTree:ENSGT00700000104206 GO:GO:0045930 GO:GO:2001022
GO:GO:0060442 GO:GO:0071850 GO:GO:0000988 GO:GO:0030284
GO:GO:0060664 GO:GO:0071899 GO:GO:0035907 GO:GO:2000836
EMBL:AAEX03014362 Ensembl:ENSCAFT00000014483 OMA:YCLGGWN
Uniprot:F1PRX2
Length = 140
Score = 104 (41.7 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 24/61 (39%), Positives = 34/61 (55%)
Query: 100 PRKKLR--LTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLK 157
P+K+ R + Q LE F LS ++ LA+ L L QV++WFQNRR ++K K
Sbjct: 29 PQKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKRK 88
Query: 158 Q 158
Q
Sbjct: 89 Q 89
>UNIPROTKB|D2H028 [details] [associations]
symbol:PANDA_002743 "Putative uncharacterized protein"
species:9646 "Ailuropoda melanoleuca" [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=ISS]
[GO:0000988 "protein binding transcription factor activity"
evidence=ISS] [GO:0001047 "core promoter binding" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0004882 "androgen
receptor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0007431 "salivary gland development" evidence=ISS] [GO:0008284
"positive regulation of cell proliferation" evidence=ISS]
[GO:0008285 "negative regulation of cell proliferation"
evidence=ISS] [GO:0010628 "positive regulation of gene expression"
evidence=ISS] [GO:0010942 "positive regulation of cell death"
evidence=ISS] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISS] [GO:0030284
"estrogen receptor activity" evidence=ISS] [GO:0030295 "protein
kinase activator activity" evidence=ISS] [GO:0030331 "estrogen
receptor binding" evidence=ISS] [GO:0030521 "androgen receptor
signaling pathway" evidence=ISS] [GO:0033574 "response to
testosterone stimulus" evidence=ISS] [GO:0043280 "positive
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISS] [GO:0043491 "protein kinase B
signaling cascade" evidence=ISS] [GO:0043569 "negative regulation
of insulin-like growth factor receptor signaling pathway"
evidence=ISS] [GO:0043621 "protein self-association" evidence=ISS]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0048754 "branching morphogenesis of an
epithelial tube" evidence=ISS] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=ISS] [GO:0051781 "positive
regulation of cell division" evidence=ISS] [GO:0060442 "branching
involved in prostate gland morphogenesis" evidence=ISS] [GO:0060664
"epithelial cell proliferation involved in salivary gland
morphogenesis" evidence=ISS] [GO:0060770 "negative regulation of
epithelial cell proliferation involved in prostate gland
development" evidence=ISS] [GO:0071383 "cellular response to
steroid hormone stimulus" evidence=ISS] [GO:0071899 "negative
regulation of estrogen receptor binding" evidence=ISS] [GO:2000836
"positive regulation of androgen secretion" evidence=ISS]
[GO:2001022 "positive regulation of response to DNA damage
stimulus" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=ISS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0045892 GO:GO:0045931 GO:GO:0008284
GO:GO:0051781 GO:GO:0045944 GO:GO:0014068 GO:GO:0030295
GO:GO:0043621 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0006919 GO:GO:0010942 GO:GO:0033574
GO:GO:0001047 GO:GO:0043491 GO:GO:0000976 GO:GO:0004882
GO:GO:0030331 GO:GO:0060770 GO:GO:2001244 GO:GO:0043569
GO:GO:0048754 GO:GO:2001022 GO:GO:0060442 GO:GO:0000988
GO:GO:0030284 GO:GO:0060664 HOGENOM:HOG000231923 GO:GO:0071899
GO:GO:2000836 EMBL:GL192401 Uniprot:D2H028
Length = 140
Score = 104 (41.7 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 24/61 (39%), Positives = 34/61 (55%)
Query: 100 PRKKLR--LTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLK 157
P+K+ R + Q LE F LS ++ LA+ L L QV++WFQNRR ++K K
Sbjct: 29 PQKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKRK 88
Query: 158 Q 158
Q
Sbjct: 89 Q 89
>WB|WBGene00000430 [details] [associations]
symbol:ceh-5 species:6239 "Caenorhabditis elegans"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 EMBL:Z81036 PIR:S05706 PIR:T19335 RefSeq:NP_492586.2
ProteinModelPortal:P20269 SMR:P20269 EnsemblMetazoa:C16C2.1
GeneID:191616 KEGG:cel:CELE_C16C2.1 UCSC:C16C2.1 CTD:191616
WormBase:C16C2.1 eggNOG:NOG309408 GeneTree:ENSGT00680000099870
HOGENOM:HOG000017392 InParanoid:P20269 OMA:QNYWTAA NextBio:949690
Uniprot:P20269
Length = 134
Score = 104 (41.7 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 23/55 (41%), Positives = 29/55 (52%)
Query: 101 RKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSK 155
R + T Q LE++F LS + LAE L L QV+VWFQNRR + K
Sbjct: 37 RPRTVFTDEQLEKLEESFNTSGYLSGSTRAKLAESLGLSDNQVKVWFQNRRTKQK 91
>UNIPROTKB|P35548 [details] [associations]
symbol:MSX2 "Homeobox protein MSX-2" species:9606 "Homo
sapiens" [GO:0045599 "negative regulation of fat cell
differentiation" evidence=IEA] [GO:0045617 "negative regulation of
keratinocyte differentiation" evidence=IEA] [GO:0045669 "positive
regulation of osteoblast differentiation" evidence=IEA] [GO:0048863
"stem cell differentiation" evidence=IEA] [GO:0051795 "positive
regulation of catagen" evidence=IEA] [GO:0060346 "bone trabecula
formation" evidence=IEA] [GO:0060364 "frontal suture morphogenesis"
evidence=IEA] [GO:0060444 "branching involved in mammary gland duct
morphogenesis" evidence=IEA] [GO:0061312 "BMP signaling pathway
involved in heart development" evidence=IEA] [GO:0070166 "enamel
mineralization" evidence=IEA] [GO:0071363 "cellular response to
growth factor stimulus" evidence=IEA] [GO:0071392 "cellular
response to estradiol stimulus" evidence=IEA] [GO:0000978 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding" evidence=IEA] [GO:0000982 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0002063 "chondrocyte development"
evidence=IEA] [GO:0002076 "osteoblast development" evidence=IEA]
[GO:0003148 "outflow tract septum morphogenesis" evidence=IEA]
[GO:0003198 "epithelial to mesenchymal transition involved in
endocardial cushion formation" evidence=IEA] [GO:0003416
"endochondral bone growth" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0008285 "negative regulation of
cell proliferation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0023019 "signal
transduction involved in regulation of gene expression"
evidence=IEA] [GO:0030513 "positive regulation of BMP signaling
pathway" evidence=IEA] [GO:0032792 "negative regulation of CREB
transcription factor activity" evidence=IEA] [GO:0035115 "embryonic
forelimb morphogenesis" evidence=IEA] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IEA] [GO:0035313 "wound healing,
spreading of epidermal cells" evidence=IEA] [GO:0035880 "embryonic
nail plate morphogenesis" evidence=IEA] [GO:0042640 "anagen"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS] [GO:0001649 "osteoblast differentiation"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:2000678 "negative regulation of transcription regulatory region
DNA binding" evidence=ISS] [GO:0003712 "transcription cofactor
activity" evidence=ISS] [GO:0060363 "cranial suture morphogenesis"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0043066
GO:GO:0008285 GO:GO:0071363 EMBL:CH471062 GO:GO:0009952
GO:GO:0043565 GO:GO:0048863 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0000122 GO:GO:0044212 GO:GO:0043065
GO:GO:0002076 GO:GO:0030513 GO:GO:0035313 GO:GO:0045669
GO:GO:0045599 GO:GO:0003712 GO:GO:0035116 GO:GO:0042640
GO:GO:0001649 GO:GO:0035115 Orphanet:60015 GO:GO:0070166
GO:GO:0071392 GO:GO:0060363 GO:GO:0023019 GO:GO:0060444
GO:GO:0002063 GO:GO:0060346 GO:GO:0032792 GO:GO:0003416
GO:GO:0003148 GO:GO:0003198 GO:GO:2000678 GO:GO:0060364
eggNOG:NOG298790 HOGENOM:HOG000231922 HOVERGEN:HBG005205 KO:K09341
OrthoDB:EOG4HQDK0 GO:GO:0045617 GO:GO:0061312 GO:GO:0035880
CTD:4488 OMA:PKEASPR GO:GO:0051795 EMBL:X69295 EMBL:L22499
EMBL:L22498 EMBL:S75308 EMBL:S75361 EMBL:D31771 EMBL:D89377
EMBL:BT009814 EMBL:AC117531 EMBL:BC015509 EMBL:D14970
IPI:IPI00292686 PIR:A49068 RefSeq:NP_002440.2 UniGene:Hs.89404
ProteinModelPortal:P35548 SMR:P35548 IntAct:P35548 STRING:P35548
PhosphoSite:P35548 DMDM:311033429 PRIDE:P35548 DNASU:4488
Ensembl:ENST00000239243 GeneID:4488 KEGG:hsa:4488 UCSC:uc003mcy.3
GeneCards:GC05P174084 H-InvDB:HIX0005431 HGNC:HGNC:7392
HPA:HPA005652 MIM:123101 MIM:168500 MIM:168550 MIM:604757
neXtProt:NX_P35548 Orphanet:1541 Orphanet:251290 PharmGKB:PA31197
InParanoid:P35548 PhylomeDB:P35548 GenomeRNAi:4488 NextBio:17363
ArrayExpress:P35548 Bgee:P35548 CleanEx:HS_MSX2
Genevestigator:P35548 GermOnline:ENSG00000120149 Uniprot:P35548
Length = 267
Score = 121 (47.7 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 38/120 (31%), Positives = 57/120 (47%)
Query: 89 IRDHHEDEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQ 148
+R H + PR T Q LE F++ LS ++ + LNL QV++WFQ
Sbjct: 136 LRKHKTNR--KPRTPF--TTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQ 191
Query: 149 NRRARSKLKQTEVECELLKRCCEKLKDENKRLQREVQE-LKSMKLSGA--PLYMK-LPAP 204
NRRA++K Q E E E LK + + + L + L++ + GA P + LP P
Sbjct: 192 NRRAKAKRLQ-EAELEKLKMAAKPMLPSSFSLPFPISSPLQAASIYGASYPFHRPVLPIP 250
>UNIPROTKB|A1YF16 [details] [associations]
symbol:MSX2 "Homeobox protein MSX-2" species:9595 "Gorilla
gorilla gorilla" [GO:0001649 "osteoblast differentiation"
evidence=ISS] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0045892 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0044212 GO:GO:0001649 HOVERGEN:HBG005205 OrthoDB:EOG4HQDK0
OMA:PKEASPR EMBL:DQ976505 RefSeq:XP_004043080.1
ProteinModelPortal:A1YF16 SMR:A1YF16 GeneID:101131683
Uniprot:A1YF16
Length = 267
Score = 121 (47.7 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 38/120 (31%), Positives = 57/120 (47%)
Query: 89 IRDHHEDEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQ 148
+R H + PR T Q LE F++ LS ++ + LNL QV++WFQ
Sbjct: 136 LRKHKTNR--KPRTPF--TTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQ 191
Query: 149 NRRARSKLKQTEVECELLKRCCEKLKDENKRLQREVQE-LKSMKLSGA--PLYMK-LPAP 204
NRRA++K Q E E E LK + + + L + L++ + GA P + LP P
Sbjct: 192 NRRAKAKRLQ-EAELEKLKMAAKPMLPSSFSLPFPISSPLQAASIYGASYPFHRPVLPIP 250
>UNIPROTKB|A1YG93 [details] [associations]
symbol:MSX2 "Homeobox protein MSX-2" species:9597 "Pan
paniscus" [GO:0001649 "osteoblast differentiation" evidence=ISS]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0045892
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0044212
GO:GO:0001649 HOVERGEN:HBG005205 KO:K09341 CTD:4488 EMBL:DQ977240
RefSeq:XP_003814060.1 ProteinModelPortal:A1YG93 SMR:A1YG93
GeneID:100987321 KEGG:pps:100987321 Uniprot:A1YG93
Length = 267
Score = 121 (47.7 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 38/120 (31%), Positives = 57/120 (47%)
Query: 89 IRDHHEDEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQ 148
+R H + PR T Q LE F++ LS ++ + LNL QV++WFQ
Sbjct: 136 LRKHKTNR--KPRTPF--TTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQ 191
Query: 149 NRRARSKLKQTEVECELLKRCCEKLKDENKRLQREVQE-LKSMKLSGA--PLYMK-LPAP 204
NRRA++K Q E E E LK + + + L + L++ + GA P + LP P
Sbjct: 192 NRRAKAKRLQ-EAELEKLKMAAKPMLPSSFSLPFPISSPLQAASIYGASYPFHRPVLPIP 250
>UNIPROTKB|A2T764 [details] [associations]
symbol:MSX2 "Homeobox protein MSX-2" species:9598 "Pan
troglodytes" [GO:0001649 "osteoblast differentiation" evidence=ISS]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0045892
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0044212
GO:GO:0001649 eggNOG:NOG298790 HOGENOM:HOG000231922
HOVERGEN:HBG005205 OrthoDB:EOG4HQDK0 EMBL:DQ977381
InParanoid:A2T764 NextBio:20911153 Uniprot:A2T764
Length = 267
Score = 121 (47.7 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 34/108 (31%), Positives = 53/108 (49%)
Query: 101 RKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLKQTE 160
+ + T Q LE F++ LS ++ + LNL QV++WFQNRRA++K Q E
Sbjct: 144 KPRXXFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQNRRAKAKRLQ-E 202
Query: 161 VECELLKRCCEKLKDENKRLQREVQE-LKSMKLSGA--PLYMK-LPAP 204
E E LK + + + L + L++ + GA P + LP P
Sbjct: 203 AELEKLKMAAKPMLPSSFSLPFPISSPLQAASIYGASYPFHRPVLPIP 250
>TAIR|locus:2207235 [details] [associations]
symbol:HDG2 "AT1G05230" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0010090 "trichome morphogenesis" evidence=IMP]
[GO:0010103 "stomatal complex morphogenesis" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0010090 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 eggNOG:NOG261733 ProtClustDB:CLSN2681990
EMBL:AC000098 EMBL:AY037177 EMBL:AY091690 IPI:IPI00530516
PIR:G86186 RefSeq:NP_001184911.1 RefSeq:NP_172015.1
RefSeq:NP_849596.1 UniGene:At.19179 UniGene:At.50922
ProteinModelPortal:Q94C37 SMR:Q94C37 STRING:Q94C37 PaxDb:Q94C37
PRIDE:Q94C37 EnsemblPlants:AT1G05230.1 EnsemblPlants:AT1G05230.2
EnsemblPlants:AT1G05230.4 GeneID:839256 KEGG:ath:AT1G05230
TAIR:At1g05230 InParanoid:Q94C37 OMA:VGVITNQ PhylomeDB:Q94C37
Genevestigator:Q94C37 Uniprot:Q94C37
Length = 721
Score = 127 (49.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 37/100 (37%), Positives = 50/100 (50%)
Query: 100 PRKKLRL---TKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKL 156
P KK R T+ Q +E FKE KQ++ L+ +LNL P QV+ WFQN+R + K
Sbjct: 62 PNKKKRYHRHTQLQIQEMEAFFKECPHPDDKQRKQLSRELNLEPLQVKFWFQNKRTQMKN 121
Query: 157 KQTEVECELLKRCCEKLKDENKRLQREVQELKSMKLSGAP 196
E L+ EKL+++N R RE S G P
Sbjct: 122 HHERHENSHLRAENEKLRNDNLRY-REALANASCPNCGGP 160
>UNIPROTKB|F1NR49 [details] [associations]
symbol:NKX2-6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104098 EMBL:AADN02055465 IPI:IPI01017154
Ensembl:ENSGALT00000040979 Uniprot:F1NR49
Length = 156
Score = 110 (43.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 23/74 (31%), Positives = 40/74 (54%)
Query: 92 HHEDEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRR 151
HH + + ++ ++ Q LE FK+ LS +++ LA L L QV++WFQNRR
Sbjct: 20 HHPKQPQRRKPRVLFSQTQVLELERRFKQQKYLSALEREHLANVLQLTSTQVKIWFQNRR 79
Query: 152 ARSKLKQTEVECEL 165
+ K ++ + E+
Sbjct: 80 YKCKRQRQDRSLEM 93
>UNIPROTKB|F1NZK4 [details] [associations]
symbol:F1NZK4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007420 "brain development" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0042472 "inner ear morphogenesis" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0008284 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104333 EMBL:AADN02078917 EMBL:AADN02078918
IPI:IPI00814051 Ensembl:ENSGALT00000038675 OMA:AKTIPSC
Uniprot:F1NZK4
Length = 179
Score = 115 (45.5 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 30/80 (37%), Positives = 41/80 (51%)
Query: 90 RDHHEDEGGSPRKKLR--LTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWF 147
RD + + G+ +KK R ++ Q LE TF LS ++ LA L L QV+ WF
Sbjct: 57 RDGGDRQAGAAKKKTRTVFSRSQVYQLESTFDMKRYLSSSERACLASSLQLTETQVKTWF 116
Query: 148 QNRRARSKLKQTEVECELLK 167
QNRR + K +Q E E K
Sbjct: 117 QNRRNKWK-RQLSAELEAAK 135
>ZFIN|ZDB-GENE-060118-2 [details] [associations]
symbol:barhl1b "BarH-like 1b" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-060118-2 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
KO:K09360 HOVERGEN:HBG050663 EMBL:AY596176 IPI:IPI00511307
RefSeq:NP_001018142.1 UniGene:Dr.88513 ProteinModelPortal:Q53B64
SMR:Q53B64 GeneID:553186 KEGG:dre:553186 CTD:553186
InParanoid:Q53B64 NextBio:20879985 Uniprot:Q53B64
Length = 323
Score = 122 (48.0 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 32/78 (41%), Positives = 42/78 (53%)
Query: 90 RDHHEDEGGSPRK-KLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQ 148
RD + PRK + T Q A LE +F+ LS + + LA LNL QV+ W+Q
Sbjct: 164 RDSPQVRLKKPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQ 223
Query: 149 NRRARSKLKQTEVECELL 166
NRR + K +QT V ELL
Sbjct: 224 NRRTKWK-RQTAVGLELL 240
>UNIPROTKB|F1NF72 [details] [associations]
symbol:F1NF72 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0009954
"proximal/distal pattern formation" evidence=IEA] [GO:0030901
"midbrain development" evidence=IEA] [GO:0030902 "hindbrain
development" evidence=IEA] [GO:0030917 "midbrain-hindbrain boundary
development" evidence=IEA] [GO:0035115 "embryonic forelimb
morphogenesis" evidence=IEA] [GO:0043473 "pigmentation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048666 "neuron
development" evidence=IEA] InterPro:IPR000047 InterPro:IPR000747
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00026 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 GeneTree:ENSGT00680000099870
PROSITE:PS00033 InterPro:IPR019549 InterPro:IPR019737 Pfam:PF10525
EMBL:AADN02016916 IPI:IPI00812139 Ensembl:ENSGALT00000019794
OMA:ASNDEKR Uniprot:F1NF72
Length = 100
Score = 103 (41.3 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 20/62 (32%), Positives = 39/62 (62%)
Query: 101 RKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLKQTE 160
R + T Q L+ F+ + ++ +++Q LA++L+L Q+++WFQN+RA+ K K T
Sbjct: 5 RPRTAFTAEQLQRLKAEFQANRYITEQRRQSLAQELSLNESQIKIWFQNKRAKIK-KATG 63
Query: 161 VE 162
++
Sbjct: 64 IK 65
>TAIR|locus:2061544 [details] [associations]
symbol:PHB "AT2G34710" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA;IMP] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA;IMP] [GO:0010014 "meristem
initiation" evidence=RCA;IMP] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA;IMP] [GO:0080060 "integument
development" evidence=IGI] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0007131 "reciprocal meiotic recombination"
evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=RCA] [GO:0010073 "meristem maintenance" evidence=RCA]
[GO:0010075 "regulation of meristem growth" evidence=RCA]
[GO:0010090 "trichome morphogenesis" evidence=RCA] [GO:0010162
"seed dormancy process" evidence=RCA] [GO:0010182 "sugar mediated
signaling pathway" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0010431 "seed maturation" evidence=RCA] [GO:0010564 "regulation
of cell cycle process" evidence=RCA] [GO:0016049 "cell growth"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0019915 "lipid storage" evidence=RCA] [GO:0033044 "regulation
of chromosome organization" evidence=RCA] [GO:0042138 "meiotic DNA
double-strand break formation" evidence=RCA] [GO:0045010 "actin
nucleation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] [GO:0045595 "regulation of cell
differentiation" evidence=RCA] [GO:0048366 "leaf development"
evidence=RCA] [GO:0048589 "developmental growth" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0048825 "cotyledon development" evidence=RCA] [GO:0050826
"response to freezing" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] [GO:0071555 "cell wall organization" evidence=RCA]
[GO:0009955 "adaxial/abaxial pattern specification" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
GO:GO:0030154 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 EMBL:AC003096
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010072 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
GO:GO:0009855 GO:GO:0009944 KO:K09338 EMBL:Y11122 EMBL:AJ441291
EMBL:AY099791 EMBL:BT000335 IPI:IPI00538463 PIR:T01364
RefSeq:NP_181018.1 UniGene:At.37771 HSSP:P10037
ProteinModelPortal:O04291 SMR:O04291 IntAct:O04291 STRING:O04291
PaxDb:O04291 PRIDE:O04291 EnsemblPlants:AT2G34710.1 GeneID:818036
KEGG:ath:AT2G34710 TAIR:At2g34710 eggNOG:NOG264261
HOGENOM:HOG000272677 InParanoid:O04291 OMA:NRKLNAM PhylomeDB:O04291
ProtClustDB:CLSN2679470 Genevestigator:O04291 GO:GO:0080060
InterPro:IPR013978 Pfam:PF08670 Uniprot:O04291
Length = 852
Score = 127 (49.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 34/101 (33%), Positives = 51/101 (50%)
Query: 95 DEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKL----NLRPRQVEVWFQNR 150
D+G K +R T Q LE + E S ++Q L + N+ P+Q++VWFQNR
Sbjct: 18 DKGLDSGKYVRYTPEQVEALERVYTECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR 77
Query: 151 RARSKLKQTEVECELLKR---CCEKL-KDENKRLQREVQEL 187
R R K ++ + + R KL +EN RLQ++V L
Sbjct: 78 RCREKQRKEAARLQTVNRKLNAMNKLLMEENDRLQKQVSNL 118
>UNIPROTKB|Q9GK08 [details] [associations]
symbol:MSX2 "Homeobox protein MSX-2" species:9615 "Canis
lupus familiaris" [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0001649 "osteoblast
differentiation" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0045892
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0044212
GO:GO:0001649 GeneTree:ENSGT00700000104129 eggNOG:NOG298790
HOGENOM:HOG000231922 HOVERGEN:HBG005205 KO:K09341 OrthoDB:EOG4HQDK0
CTD:4488 OMA:PKEASPR EMBL:AJ277753 EMBL:AJ303104 EMBL:AJ303105
RefSeq:NP_001003098.1 UniGene:Cfa.3529 ProteinModelPortal:Q9GK08
SMR:Q9GK08 STRING:Q9GK08 Ensembl:ENSCAFT00000026491
Ensembl:ENSCAFT00000046226 GeneID:403663 KEGG:cfa:403663
InParanoid:Q9GK08 NextBio:20817168 Uniprot:Q9GK08
Length = 267
Score = 120 (47.3 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 38/120 (31%), Positives = 56/120 (46%)
Query: 89 IRDHHEDEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQ 148
+R H + PR T Q LE F++ LS ++ + LNL QV++WFQ
Sbjct: 136 LRKHKTNR--KPRTPF--TTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQ 191
Query: 149 NRRARSKLKQTEVECELLKRCCEKLKDENKRLQREVQE-LKSMKLSGA--PLYMK-LPAP 204
NRRA++K Q E E E LK + + L + L++ + GA P + LP P
Sbjct: 192 NRRAKAKRLQ-EAELEKLKMAAKPMLPSGFSLPFPINSPLQAASIYGASYPFHRPVLPIP 250
>MGI|MGI:97169 [details] [associations]
symbol:Msx2 "homeobox, msh-like 2" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IGI;IDA] [GO:0000978 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding" evidence=ISO] [GO:0000982 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity" evidence=ISO] [GO:0000989 "transcription factor binding
transcription factor activity" evidence=IDA] [GO:0001503
"ossification" evidence=IMP] [GO:0001649 "osteoblast
differentiation" evidence=IDA] [GO:0002063 "chondrocyte
development" evidence=IMP] [GO:0002076 "osteoblast development"
evidence=IMP] [GO:0003148 "outflow tract septum morphogenesis"
evidence=IGI] [GO:0003151 "outflow tract morphogenesis"
evidence=IGI] [GO:0003198 "epithelial to mesenchymal transition
involved in endocardial cushion formation" evidence=IGI]
[GO:0003416 "endochondral bone growth" evidence=IMP] [GO:0003677
"DNA binding" evidence=IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IPI]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0008285 "negative
regulation of cell proliferation" evidence=IGI] [GO:0009952
"anterior/posterior pattern specification" evidence=IGI]
[GO:0023019 "signal transduction involved in regulation of gene
expression" evidence=IGI] [GO:0030326 "embryonic limb
morphogenesis" evidence=IGI] [GO:0030509 "BMP signaling pathway"
evidence=IGI;IDA] [GO:0030513 "positive regulation of BMP signaling
pathway" evidence=IGI] [GO:0032792 "negative regulation of CREB
transcription factor activity" evidence=IDA] [GO:0035115 "embryonic
forelimb morphogenesis" evidence=IGI] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IGI] [GO:0035313 "wound healing,
spreading of epidermal cells" evidence=IMP] [GO:0035880 "embryonic
nail plate morphogenesis" evidence=IGI] [GO:0042060 "wound healing"
evidence=IMP] [GO:0042476 "odontogenesis" evidence=IMP] [GO:0042640
"anagen" evidence=IMP] [GO:0042733 "embryonic digit morphogenesis"
evidence=IGI] [GO:0042981 "regulation of apoptotic process"
evidence=IGI;IDA] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISO] [GO:0043066 "negative regulation of
apoptotic process" evidence=IGI] [GO:0043565 "sequence-specific DNA
binding" evidence=ISO] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IDA] [GO:0045599 "negative regulation of fat
cell differentiation" evidence=IDA] [GO:0045617 "negative
regulation of keratinocyte differentiation" evidence=IMP]
[GO:0045669 "positive regulation of osteoblast differentiation"
evidence=IDA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0048863 "stem cell
differentiation" evidence=IGI] [GO:0051216 "cartilage development"
evidence=ISO;IMP] [GO:0051795 "positive regulation of catagen"
evidence=IMP] [GO:0060346 "bone trabecula formation" evidence=IMP]
[GO:0060349 "bone morphogenesis" evidence=IGI] [GO:0060364 "frontal
suture morphogenesis" evidence=IMP] [GO:0060444 "branching involved
in mammary gland duct morphogenesis" evidence=IMP] [GO:0061180
"mammary gland epithelium development" evidence=IGI] [GO:0061312
"BMP signaling pathway involved in heart development" evidence=IGI]
[GO:0070166 "enamel mineralization" evidence=IMP] [GO:0071363
"cellular response to growth factor stimulus" evidence=IDA]
[GO:0071392 "cellular response to estradiol stimulus" evidence=IDA]
[GO:2000678 "negative regulation of transcription regulatory region
DNA binding" evidence=IDA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:97169 GO:GO:0005737 GO:GO:0043066
GO:GO:0008285 GO:GO:0071363 GO:GO:0009952 GO:GO:0043565
GO:GO:0048863 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0000122 GO:GO:0044212 GO:GO:0043065 GO:GO:0002076
GO:GO:0030513 GO:GO:0035313 GO:GO:0045669 GO:GO:0045599
GO:GO:0003712 GO:GO:0035116 GO:GO:0042640 GO:GO:0035115
GO:GO:0070166 GO:GO:0071392 GO:GO:0023019 GO:GO:0060444
GO:GO:0002063 GO:GO:0060346 GO:GO:0032792 GO:GO:0003416
GO:GO:0003148 GO:GO:0003198 GO:GO:2000678 GO:GO:0060364
eggNOG:NOG298790 HOGENOM:HOG000231922 HOVERGEN:HBG005205 KO:K09341
OrthoDB:EOG4HQDK0 GO:GO:0045617 GO:GO:0061312 GO:GO:0035880
CTD:4488 OMA:PKEASPR GO:GO:0051795 EMBL:L11739 EMBL:L11738
EMBL:S60460 EMBL:S60698 EMBL:X59252 EMBL:M38576 IPI:IPI00131225
PIR:A46122 PIR:PS0410 PIR:S18814 RefSeq:NP_038629.2 UniGene:Mm.1763
ProteinModelPortal:Q03358 SMR:Q03358 IntAct:Q03358 STRING:Q03358
PhosphoSite:Q03358 PRIDE:Q03358 Ensembl:ENSMUST00000021922
GeneID:17702 KEGG:mmu:17702 InParanoid:Q03358 NextBio:292298
Bgee:Q03358 CleanEx:MM_MSX2 Genevestigator:Q03358
GermOnline:ENSMUSG00000021469 Uniprot:Q03358
Length = 267
Score = 120 (47.3 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 38/120 (31%), Positives = 56/120 (46%)
Query: 89 IRDHHEDEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQ 148
+R H + PR T Q LE F++ LS ++ + LNL QV++WFQ
Sbjct: 136 LRKHKTNR--KPRTPF--TTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQ 191
Query: 149 NRRARSKLKQTEVECELLKRCCEKLKDENKRLQREVQE-LKSMKLSGA--PLYMK-LPAP 204
NRRA++K Q E E E LK + + L + L++ + GA P + LP P
Sbjct: 192 NRRAKAKRLQ-EAELEKLKMAAKPMLPSGFSLPFPINSPLQAASIYGASYPFHRPVLPIP 250
>UNIPROTKB|F1NXB2 [details] [associations]
symbol:HHEX "Hematopoietically-expressed homeobox protein
HHEX" species:9031 "Gallus gallus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00680000099625 IPI:IPI00584628
EMBL:AADN02046631 Ensembl:ENSGALT00000010965 Uniprot:F1NXB2
Length = 277
Score = 120 (47.3 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 29/70 (41%), Positives = 42/70 (60%)
Query: 90 RDHHEDEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQN 149
R H+ +GG ++R + Q LE F+ LSP +++ LA+ L L RQV+ WFQN
Sbjct: 139 RPLHKRKGG----QVRFSNEQTIELEKKFETQKYLSPPERKRLAKLLQLSERQVKTWFQN 194
Query: 150 RRAR-SKLKQ 158
RRA+ +LKQ
Sbjct: 195 RRAKWRRLKQ 204
>UNIPROTKB|Q05502 [details] [associations]
symbol:HHEX "Hematopoietically-expressed homeobox protein
HHEX" species:9031 "Gallus gallus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IC;ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0045892 GO:GO:0030154 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG252905 EMBL:X64711 IPI:IPI00584628
PIR:S78063 RefSeq:NP_990583.1 UniGene:Gga.3316
ProteinModelPortal:Q05502 SMR:Q05502 STRING:Q05502 GeneID:396182
KEGG:gga:396182 CTD:3087 HOGENOM:HOG000049110 HOVERGEN:HBG055460
KO:K08024 OrthoDB:EOG4XKV7W NextBio:20816236 Uniprot:Q05502
Length = 277
Score = 120 (47.3 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 29/70 (41%), Positives = 42/70 (60%)
Query: 90 RDHHEDEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQN 149
R H+ +GG ++R + Q LE F+ LSP +++ LA+ L L RQV+ WFQN
Sbjct: 139 RPLHKRKGG----QVRFSNEQTIELEKKFETQKYLSPPERKRLAKLLQLSERQVKTWFQN 194
Query: 150 RRAR-SKLKQ 158
RRA+ +LKQ
Sbjct: 195 RRAKWRRLKQ 204
>UNIPROTKB|J9P485 [details] [associations]
symbol:EMX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00680000099625 EMBL:AAEX03015567 EMBL:AAEX03015568
EMBL:AAEX03015569 Ensembl:ENSCAFT00000043720 Uniprot:J9P485
Length = 134
Score = 102 (41.0 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 27/64 (42%), Positives = 37/64 (57%)
Query: 102 KKLRLT-KP-QFATLEDTF-KEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLKQ 158
K++R P Q LE F K H + ++KQ LA L+L QV+VWFQNRR + K ++
Sbjct: 37 KRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQ-LAHSLSLTETQVKVWFQNRRTKFKRQK 95
Query: 159 TEVE 162
E E
Sbjct: 96 LEEE 99
>UNIPROTKB|F1S1H4 [details] [associations]
symbol:MEOX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071837 "HMG box domain binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0001757 "somite specification"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001757
GeneTree:ENSGT00660000095141 KO:K09322 OMA:QPPAPVW EMBL:CU928405
RefSeq:XP_003131424.2 Ensembl:ENSSSCT00000018915 GeneID:100516574
KEGG:ssc:100516574 Uniprot:F1S1H4
Length = 254
Score = 119 (46.9 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 34/115 (29%), Positives = 50/115 (43%)
Query: 43 SLTLGRRSENTLKSATKEKESTDVLQQAXXXXXXXXXXXXXXXXKGIRDHHEDEGGSPRK 102
S +G RS + + E +VL + + + E GS +
Sbjct: 113 SKEMGARSPGLVDTTGGPGEDYEVLGSSANETEKKSTRRKKESSDNQENRGKPEAGSKAR 172
Query: 103 KLR--LTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSK 155
K R TK Q LE F H+ L+ ++ +A L+L RQV+VWFQNRR + K
Sbjct: 173 KERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQVKVWFQNRRMKWK 227
>UNIPROTKB|E2QSL9 [details] [associations]
symbol:BARHL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043524
"negative regulation of neuron apoptotic process" evidence=IEA]
[GO:0030901 "midbrain development" evidence=IEA] [GO:0007605
"sensory perception of sound" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0001764 GO:GO:0043565
GO:GO:0043524 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0001077 GO:GO:0007605 GO:GO:0030901
GeneTree:ENSGT00700000104206 KO:K09360 CTD:56751 OMA:DCLETGA
EMBL:AAEX03006814 RefSeq:XP_548404.3 Ensembl:ENSCAFT00000031649
GeneID:491283 KEGG:cfa:491283 NextBio:20864157 Uniprot:E2QSL9
Length = 327
Score = 121 (47.7 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 30/68 (44%), Positives = 39/68 (57%)
Query: 100 PRK-KLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLKQ 158
PRK + T Q A LE +F+ LS + + LA LNL QV+ W+QNRR + K +Q
Sbjct: 178 PRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTKWK-RQ 236
Query: 159 TEVECELL 166
T V ELL
Sbjct: 237 TAVGLELL 244
>UNIPROTKB|Q9BZE3 [details] [associations]
symbol:BARHL1 "BarH-like 1 homeobox protein" species:9606
"Homo sapiens" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0007605 "sensory
perception of sound" evidence=IEA] [GO:0030901 "midbrain
development" evidence=IEA] [GO:0043524 "negative regulation of
neuron apoptotic process" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0001764 GO:GO:0043565
EMBL:CH471090 GO:GO:0043524 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001077 GO:GO:0007605
GO:GO:0030901 eggNOG:NOG263484 KO:K09360 EMBL:AF325688
EMBL:AF321618 EMBL:AK054797 EMBL:AL354735 EMBL:BC136956
EMBL:BC136969 EMBL:AJ237816 IPI:IPI00024060 RefSeq:NP_064448.1
UniGene:Hs.283809 ProteinModelPortal:Q9BZE3 SMR:Q9BZE3
STRING:Q9BZE3 PhosphoSite:Q9BZE3 DMDM:29336920 PaxDb:Q9BZE3
PRIDE:Q9BZE3 Ensembl:ENST00000263610 Ensembl:ENST00000542090
GeneID:56751 KEGG:hsa:56751 UCSC:uc004cbp.1 CTD:56751
GeneCards:GC09P135457 HGNC:HGNC:953 HPA:HPA004809 MIM:605211
neXtProt:NX_Q9BZE3 PharmGKB:PA25257 HOGENOM:HOG000231533
HOVERGEN:HBG050663 InParanoid:Q9BZE3 OMA:DCLETGA OrthoDB:EOG4F4SBJ
PhylomeDB:Q9BZE3 GenomeRNAi:56751 NextBio:62212 ArrayExpress:Q9BZE3
Bgee:Q9BZE3 CleanEx:HS_BARHL1 Genevestigator:Q9BZE3
GermOnline:ENSG00000125492 Uniprot:Q9BZE3
Length = 327
Score = 121 (47.7 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 30/68 (44%), Positives = 39/68 (57%)
Query: 100 PRK-KLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLKQ 158
PRK + T Q A LE +F+ LS + + LA LNL QV+ W+QNRR + K +Q
Sbjct: 178 PRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTKWK-RQ 236
Query: 159 TEVECELL 166
T V ELL
Sbjct: 237 TAVGLELL 244
>UNIPROTKB|F1S0T9 [details] [associations]
symbol:BARHL1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043524 "negative
regulation of neuron apoptotic process" evidence=IEA] [GO:0030901
"midbrain development" evidence=IEA] [GO:0007605 "sensory
perception of sound" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0001764 GO:GO:0043565 GO:GO:0043524
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0001077 GO:GO:0007605 GO:GO:0030901
GeneTree:ENSGT00700000104206 KO:K09360 CTD:56751 OMA:DCLETGA
EMBL:CU326339 RefSeq:XP_001929470.1 Ensembl:ENSSSCT00000006301
GeneID:100152288 KEGG:ssc:100152288 Uniprot:F1S0T9
Length = 327
Score = 121 (47.7 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 30/68 (44%), Positives = 39/68 (57%)
Query: 100 PRK-KLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLKQ 158
PRK + T Q A LE +F+ LS + + LA LNL QV+ W+QNRR + K +Q
Sbjct: 178 PRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTKWK-RQ 236
Query: 159 TEVECELL 166
T V ELL
Sbjct: 237 TAVGLELL 244
>MGI|MGI:1859288 [details] [associations]
symbol:Barhl1 "BarH-like 1 (Drosophila)" species:10090 "Mus
musculus" [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IDA]
[GO:0001764 "neuron migration" evidence=IMP] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007605 "sensory perception of
sound" evidence=IMP] [GO:0030901 "midbrain development"
evidence=IMP] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:1859288 GO:GO:0005634
GO:GO:0001764 GO:GO:0043565 GO:GO:0043524 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001077
GO:GO:0007605 GO:GO:0030901 GeneTree:ENSGT00700000104206
eggNOG:NOG263484 KO:K09360 CTD:56751 HOGENOM:HOG000231533
HOVERGEN:HBG050663 OMA:DCLETGA OrthoDB:EOG4F4SBJ EMBL:AJ237590
EMBL:AB043980 EMBL:AF264026 EMBL:BC055731 IPI:IPI00122197
RefSeq:NP_001157658.1 RefSeq:NP_062319.1 UniGene:Mm.21390
ProteinModelPortal:P63157 SMR:P63157 STRING:P63157
PhosphoSite:P63157 PRIDE:P63157 Ensembl:ENSMUST00000050776
Ensembl:ENSMUST00000113847 Ensembl:ENSMUST00000113849 GeneID:54422
KEGG:mmu:54422 InParanoid:P63157 NextBio:311296 Bgee:P63157
CleanEx:MM_BARHL1 Genevestigator:P63157
GermOnline:ENSMUSG00000026805 Uniprot:P63157
Length = 327
Score = 121 (47.7 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 30/68 (44%), Positives = 39/68 (57%)
Query: 100 PRK-KLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLKQ 158
PRK + T Q A LE +F+ LS + + LA LNL QV+ W+QNRR + K +Q
Sbjct: 178 PRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTKWK-RQ 236
Query: 159 TEVECELL 166
T V ELL
Sbjct: 237 TAVGLELL 244
>RGD|620648 [details] [associations]
symbol:Barhl1 "BarH-like homeobox 1" species:10116 "Rattus
norvegicus" [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA;ISO]
[GO:0001764 "neuron migration" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0007605 "sensory perception of
sound" evidence=IEA;ISO] [GO:0030901 "midbrain development"
evidence=IEA;ISO] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IEA;ISO] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
RGD:620648 GO:GO:0005634 GO:GO:0001764 GO:GO:0043565 GO:GO:0043524
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0001077 GO:GO:0007605 GO:GO:0030901
GeneTree:ENSGT00700000104206 eggNOG:NOG263484 KO:K09360 CTD:56751
HOGENOM:HOG000231533 HOVERGEN:HBG050663 OMA:DCLETGA
OrthoDB:EOG4F4SBJ EMBL:AB043981 IPI:IPI00201978 RefSeq:NP_476450.1
UniGene:Rn.162655 ProteinModelPortal:P63156 SMR:P63156
Ensembl:ENSRNOT00000017725 GeneID:117232 KEGG:rno:117232
UCSC:RGD:620648 InParanoid:P63156 NextBio:620058
Genevestigator:P63156 GermOnline:ENSRNOG00000013209 Uniprot:P63156
Length = 327
Score = 121 (47.7 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 30/68 (44%), Positives = 39/68 (57%)
Query: 100 PRK-KLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLKQ 158
PRK + T Q A LE +F+ LS + + LA LNL QV+ W+QNRR + K +Q
Sbjct: 178 PRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTKWK-RQ 236
Query: 159 TEVECELL 166
T V ELL
Sbjct: 237 TAVGLELL 244
>UNIPROTKB|F1NES3 [details] [associations]
symbol:HHEX "Hematopoietically-expressed homeobox protein
HHEX" species:9031 "Gallus gallus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0002573 "myeloid leukocyte differentiation" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007492
"endoderm development" evidence=IEA] [GO:0008190 "eukaryotic
initiation factor 4E binding" evidence=IEA] [GO:0008301 "DNA
binding, bending" evidence=IEA] [GO:0016973 "poly(A)+ mRNA export
from nucleus" evidence=IEA] [GO:0022027 "interkinetic nuclear
migration" evidence=IEA] [GO:0030177 "positive regulation of Wnt
receptor signaling pathway" evidence=IEA] [GO:0030183 "B cell
differentiation" evidence=IEA] [GO:0030878 "thyroid gland
development" evidence=IEA] [GO:0031016 "pancreas development"
evidence=IEA] [GO:0032993 "protein-DNA complex" evidence=IEA]
[GO:0034504 "protein localization to nucleus" evidence=IEA]
[GO:0035050 "embryonic heart tube development" evidence=IEA]
[GO:0035264 "multicellular organism growth" evidence=IEA]
[GO:0042127 "regulation of cell proliferation" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048568
"embryonic organ development" evidence=IEA] [GO:0048853 "forebrain
morphogenesis" evidence=IEA] [GO:0060431 "primary lung bud
formation" evidence=IEA] [GO:0061009 "common bile duct development"
evidence=IEA] [GO:0061010 "gall bladder development" evidence=IEA]
[GO:0061011 "hepatic duct development" evidence=IEA] [GO:0061017
"hepatoblast differentiation" evidence=IEA] [GO:0070365 "hepatocyte
differentiation" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0071103 "DNA
conformation change" evidence=IEA] [GO:0071837 "HMG box domain
binding" evidence=IEA] [GO:0090009 "primitive streak formation"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0007165
GO:GO:0008283 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122 GO:GO:0008301
GO:GO:0044212 GO:GO:0007049 GO:GO:0030177 GO:GO:0034504
GO:GO:0032993 GO:GO:0016973 GeneTree:ENSGT00680000099625
OMA:DNSCDQR GO:GO:0071103 EMBL:AADN02046631 IPI:IPI00820051
Ensembl:ENSGALT00000039741 Uniprot:F1NES3
Length = 285
Score = 120 (47.3 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 29/70 (41%), Positives = 42/70 (60%)
Query: 90 RDHHEDEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQN 149
R H+ +GG ++R + Q LE F+ LSP +++ LA+ L L RQV+ WFQN
Sbjct: 148 RPLHKRKGG----QVRFSNEQTIELEKKFETQKYLSPPERKRLAKLLQLSERQVKTWFQN 203
Query: 150 RRAR-SKLKQ 158
RRA+ +LKQ
Sbjct: 204 RRAKWRRLKQ 213
>UNIPROTKB|E1B9T6 [details] [associations]
symbol:BARHL1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043524 "negative
regulation of neuron apoptotic process" evidence=IEA] [GO:0030901
"midbrain development" evidence=IEA] [GO:0007605 "sensory
perception of sound" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0001764 GO:GO:0043565 GO:GO:0043524
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0001077 GO:GO:0007605 GO:GO:0030901
GeneTree:ENSGT00700000104206 OMA:DCLETGA EMBL:DAAA02032283
IPI:IPI00687480 Ensembl:ENSBTAT00000032657 Uniprot:E1B9T6
Length = 337
Score = 121 (47.7 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 30/68 (44%), Positives = 39/68 (57%)
Query: 100 PRK-KLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLKQ 158
PRK + T Q A LE +F+ LS + + LA LNL QV+ W+QNRR + K +Q
Sbjct: 188 PRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTKWK-RQ 246
Query: 159 TEVECELL 166
T V ELL
Sbjct: 247 TAVGLELL 254
>UNIPROTKB|F1NU45 [details] [associations]
symbol:NKX2-6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104098 EMBL:AADN02055465 IPI:IPI00582020
Ensembl:ENSGALT00000000497 OMA:SYGVGYT Uniprot:F1NU45
Length = 159
Score = 110 (43.8 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 23/74 (31%), Positives = 40/74 (54%)
Query: 92 HHEDEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRR 151
HH + + ++ ++ Q LE FK+ LS +++ LA L L QV++WFQNRR
Sbjct: 23 HHPKQPQRRKPRVLFSQTQVLELERRFKQQKYLSALEREHLANVLQLTSTQVKIWFQNRR 82
Query: 152 ARSKLKQTEVECEL 165
+ K ++ + E+
Sbjct: 83 YKCKRQRQDRSLEM 96
>UNIPROTKB|P24343 [details] [associations]
symbol:HOXD12 "Homeobox protein Hox-D12" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0001501 "skeletal
system development" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0007389 "pattern specification process"
evidence=IEA] [GO:0042733 "embryonic digit morphogenesis"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0005667 GeneTree:ENSGT00700000104263 HOGENOM:HOG000231177
HOVERGEN:HBG052050 KO:K09297 EMBL:X62019 EMBL:D10289
IPI:IPI00598647 PIR:A45186 PIR:C37914 PIR:S14800 RefSeq:NP_990580.1
UniGene:Gga.695 ProteinModelPortal:P24343 IntAct:P24343
STRING:P24343 Ensembl:ENSGALT00000015086 GeneID:396178
KEGG:gga:396178 CTD:3238 eggNOG:NOG241833 InParanoid:P24343
OMA:PDGLPWG OrthoDB:EOG43N7DG NextBio:20816232 Uniprot:P24343
Length = 266
Score = 119 (46.9 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 23/60 (38%), Positives = 40/60 (66%)
Query: 96 EGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSK 155
+G S +K+ TK Q A LE+ F + ++ ++++ L+ +LNL +QV++WFQNRR + K
Sbjct: 195 QGRSRKKRKPYTKQQIAELENEFLLNEFINRQKRKELSNRLNLSDQQVKIWFQNRRMKKK 254
>UNIPROTKB|E1B707 [details] [associations]
symbol:LBX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104206 KO:K09353 CTD:85474 OMA:MVPRAPS
EMBL:DAAA02030322 IPI:IPI00705587 RefSeq:NP_001179057.1
UniGene:Bt.106435 Ensembl:ENSBTAT00000022088 GeneID:538906
KEGG:bta:538906 NextBio:20877656 Uniprot:E1B707
Length = 196
Score = 115 (45.5 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 28/72 (38%), Positives = 37/72 (51%)
Query: 96 EGGSPRKKLR--LTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRAR 153
+ G R+K R T Q LE F L+P ++ GLA +L L QV WFQNRRA+
Sbjct: 80 QAGRRRRKSRTAFTAQQVLELERRFVFQKYLAPSERDGLASRLGLANAQVVTWFQNRRAK 139
Query: 154 SKLKQTEVECEL 165
K E+ +L
Sbjct: 140 LKRDVEEMRADL 151
>RGD|1561172 [details] [associations]
symbol:Lbx2 "ladybird homeobox 2" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS50071 SMART:SM00389
RGD:1561172 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 EMBL:CH473957
GeneTree:ENSGT00700000104206 KO:K09353 CTD:85474 OMA:MVPRAPS
OrthoDB:EOG4NKBWK IPI:IPI00196022 RefSeq:NP_001102714.1
UniGene:Rn.218501 Ensembl:ENSRNOT00000011189 GeneID:500224
KEGG:rno:500224 UCSC:RGD:1561172 NextBio:705462 Uniprot:D4A7L0
Length = 196
Score = 115 (45.5 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 28/71 (39%), Positives = 36/71 (50%)
Query: 101 RKKLR--LTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLKQ 158
R+K R T Q LE F L+P ++ GLA +L L QV WFQNRRA+ K
Sbjct: 83 RRKSRTAFTPQQVLELERRFVFQKYLAPSERDGLAARLGLANAQVVTWFQNRRAKLKRDV 142
Query: 159 TEVECELLKRC 169
E+ +L C
Sbjct: 143 EEMRADLASLC 153
>UNIPROTKB|H9L184 [details] [associations]
symbol:Gga.48067 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0002011
"morphogenesis of an epithelial sheet" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048103 "somatic stem cell division"
evidence=IEA] [GO:0048536 "spleen development" evidence=IEA]
[GO:0048539 "bone marrow development" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0060216
"definitive hemopoiesis" evidence=IEA] [GO:0060218 "hematopoietic
stem cell differentiation" evidence=IEA] [GO:2000738 "positive
regulation of stem cell differentiation" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 EMBL:AADN02014570
Ensembl:ENSGALT00000029853 OMA:MANTIPP Uniprot:H9L184
Length = 102
Score = 101 (40.6 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 97 GGSP-RKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSK 155
GG P R + T+ Q LE F + L+ +++ +A L L RQ+++WFQNRR + K
Sbjct: 7 GGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWK 66
>UNIPROTKB|P97273 [details] [associations]
symbol:TITF1 "Thyroid transcription factor 1" species:10141
"Cavia porcellus" [GO:0005654 "nucleoplasm" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007411 GO:GO:0021766 GO:GO:0001764
GO:GO:0045893 GO:GO:0005654 GO:GO:0033327 GO:GO:0043565
GO:GO:0006644 GO:GO:0045944 GO:GO:0007626 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0003705 GO:GO:0000122 GO:GO:0030336 GO:GO:0044212
GO:GO:0009725 GO:GO:0060510 GO:GO:0021983 GO:GO:0007492
GO:GO:0021877 GO:GO:0048709 GO:GO:0021759 GO:GO:0021892
GO:GO:0030512 GO:GO:0060441 GO:GO:0010719 GO:GO:0021795
GO:GO:0030878 GO:GO:0060430 GO:GO:0021798 GO:GO:0060486
eggNOG:NOG328614 HOGENOM:HOG000231923 HOVERGEN:HBG006689
GO:GO:0031128 GO:GO:0042696 EMBL:U82718 ProteinModelPortal:P97273
SMR:P97273 STRING:P97273 InParanoid:P97273 Uniprot:P97273
Length = 112
Score = 101 (40.6 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 19/54 (35%), Positives = 33/54 (61%)
Query: 102 KKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSK 155
+++ ++ Q LE FK+ LS +++ LA ++L P QV++WFQN R + K
Sbjct: 4 RRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMK 57
>UNIPROTKB|Q6F2E2 [details] [associations]
symbol:vex1 "Homeobox protein vex1" species:8364 "Xenopus
(Silurana) tropicalis" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0030509 "BMP signaling pathway" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0048264 "determination of ventral identity" evidence=ISS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0030509
GO:GO:0048264 HSSP:P06602 EMBL:AC149072 HOVERGEN:HBG094147
UniGene:Str.30175 ProteinModelPortal:Q6F2E2 Xenbase:XB-GENE-483077
Uniprot:Q6F2E2
Length = 282
Score = 119 (46.9 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 24/66 (36%), Positives = 39/66 (59%)
Query: 95 DEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARS 154
DE + R + + T Q LE +FKE+ + +K+ L++ L L Q++ WFQNRR +
Sbjct: 125 DEDAASRARTKFTAEQLEELEKSFKENRYIGSSEKRRLSKVLKLSENQIKTWFQNRRMKF 184
Query: 155 KLKQTE 160
K +QT+
Sbjct: 185 K-RQTQ 189
>UNIPROTKB|Q5TM84 [details] [associations]
symbol:NANOG "Homeobox protein NANOG" species:9541 "Macaca
fascicularis" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0003714
"transcription corepressor activity" evidence=ISS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003714 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
HSSP:P13297 HOVERGEN:HBG058783 OrthoDB:EOG40VVQM EMBL:AB126938
ProteinModelPortal:Q5TM84 SMR:Q5TM84 Uniprot:Q5TM84
Length = 305
Score = 119 (46.9 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 36/142 (25%), Positives = 61/142 (42%)
Query: 16 ALPQSDDHDHQKKNGKKLILKDDQLLPSLTLGRRSENTLKSATKEKESTDVLQQAXXXXX 75
+LP + D ++ + +I ++ PSL + ++ + S D+L Q
Sbjct: 10 SLPCLEASDSKESSPMPVICGPEENYPSLQMSSAEMPHTETVSPLPSSMDLLIQDSPDSS 69
Query: 76 XXXXXXXXXXXKGIRDHHEDEGGSPRKKLR--LTKPQFATLEDTFKEHSTLSPKQKQGLA 133
+ ED+ ++K R + Q L D F+ LS +Q Q L+
Sbjct: 70 TSPKGKQPTAAENSATKKEDKVPVKKQKARTVFSSAQLCVLNDRFQRQKYLSLQQMQELS 129
Query: 134 EKLNLRPRQVEVWFQNRRARSK 155
LNL +QV+ WFQN+R +SK
Sbjct: 130 NILNLSYKQVKTWFQNQRMKSK 151
>POMBASE|SPAC32A11.03c [details] [associations]
symbol:phx1 "homeobox transcription factor Phx1"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=NAS] [GO:0000978 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding"
evidence=NAS] [GO:0000982 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=NAS] InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS50071 SMART:SM00389 PomBase:SPAC32A11.03c
EMBL:CU329670 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000978
GO:GO:0000790 GO:GO:0000982 eggNOG:COG5576 PIR:T38649
RefSeq:NP_593776.1 ProteinModelPortal:Q10328
EnsemblFungi:SPAC32A11.03c.1 GeneID:2542405 KEGG:spo:SPAC32A11.03c
OrthoDB:EOG4W9NCB NextBio:20803464 Uniprot:Q10328
Length = 942
Score = 125 (49.1 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 39/107 (36%), Positives = 59/107 (55%)
Query: 95 DEGGS---PR-KKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNR 150
+ GGS P+ KK RLT Q A L F + + P ++ + +LN+ R V +WFQNR
Sbjct: 158 ESGGSTSAPKSKKQRLTADQLAYLLREFSKDTNPPPAIREKIGRELNIPERSVTIWFQNR 217
Query: 151 RARSKLKQTEVECELLKRCCEKLKDENKRLQREVQELKSM--KLSGA 195
RA+SKL + R + ++E +R+ RE +EL S+ K+S A
Sbjct: 218 RAKSKL---------ISR---RQEEERQRILREQRELDSLNQKVSQA 252
>UNIPROTKB|F1N765 [details] [associations]
symbol:LOC785113 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104333 EMBL:DAAA02018441 IPI:IPI00840399
Ensembl:ENSBTAT00000044175 Uniprot:F1N765
Length = 316
Score = 119 (46.9 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 39/118 (33%), Positives = 53/118 (44%)
Query: 97 GGSPRKKLR--LTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARS 154
GG +KK R ++ Q LE TF LS ++ GLA L L QV++WFQNRR +
Sbjct: 168 GGGRKKKTRTVFSRSQVIPLESTFDLKRYLSSAERAGLAASLQLTETQVKIWFQNRRNKW 227
Query: 155 KLKQTEVECELLKRCCEKLKDENKRLQR-EVQELKSMKLSGAPLYMKLPAPTLTVCPS 211
K +Q E E +R+ R V +S +GA LP P P+
Sbjct: 228 K-RQLAAELE----AASLSPPGTQRMVRVPVLYHESSPAAGAAAAAALPFPLAPAAPA 280
>UNIPROTKB|F1P4U7 [details] [associations]
symbol:HOXD11 "Homeobox protein Hox-D11" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0001759 "organ induction" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0009954 "proximal/distal pattern formation"
evidence=IEA] [GO:0010720 "positive regulation of cell development"
evidence=IEA] [GO:0032332 "positive regulation of chondrocyte
differentiation" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0048589 "developmental growth"
evidence=IEA] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IEA] [GO:0060351 "cartilage development involved in
endochondral bone morphogenesis" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0032332 GO:GO:0048589 GO:GO:0001759
GO:GO:0010720 GeneTree:ENSGT00700000104263 IPI:IPI00583692
EMBL:AADN02020032 Ensembl:ENSGALT00000015085 Uniprot:F1P4U7
Length = 109
Score = 100 (40.3 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 22/57 (38%), Positives = 34/57 (59%)
Query: 99 SPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSK 155
S +K+ TK Q LE F + ++ +++ L+ LNL RQV++WFQNRR + K
Sbjct: 37 SRKKRCPYTKYQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEK 93
>UNIPROTKB|G4N2B2 [details] [associations]
symbol:MGG_04853 "Homeoprotein" species:242507 "Magnaporthe
oryzae 70-15" [GO:0043581 "mycelium development" evidence=IEP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 EMBL:CM001233 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0043581
RefSeq:XP_003712331.1 ProteinModelPortal:G4N2B2
EnsemblFungi:MGG_04853T0 GeneID:2675295 KEGG:mgr:MGG_04853
Uniprot:G4N2B2
Length = 625
Score = 123 (48.4 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 23/56 (41%), Positives = 37/56 (66%)
Query: 101 RKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKL 156
+K+ R T+ Q TLE F ++ T + + +AE++N+ R V++WFQNRRA+ KL
Sbjct: 75 QKRQRATQDQLTTLEQEFAKNPTPTATVRDRIAEEINMTERSVQIWFQNRRAKIKL 130
>RGD|620520 [details] [associations]
symbol:Nkx2-5 "NK2 homeobox 5" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO;IDA] [GO:0001104 "RNA
polymerase II transcription cofactor activity" evidence=IEA;ISO]
[GO:0001190 "RNA polymerase II transcription factor binding
transcription factor activity involved in positive regulation of
transcription" evidence=IEA;ISO] [GO:0001570 "vasculogenesis"
evidence=IEA;ISO] [GO:0001947 "heart looping" evidence=IEA;ISO]
[GO:0003007 "heart morphogenesis" evidence=ISO] [GO:0003148
"outflow tract septum morphogenesis" evidence=IEA;ISO] [GO:0003151
"outflow tract morphogenesis" evidence=ISO] [GO:0003161 "cardiac
conduction system development" evidence=ISO] [GO:0003162
"atrioventricular node development" evidence=ISO] [GO:0003166
"bundle of His development" evidence=IEA;ISO] [GO:0003168 "Purkinje
myocyte differentiation" evidence=IEA;ISO] [GO:0003208 "cardiac
ventricle morphogenesis" evidence=ISO] [GO:0003211 "cardiac
ventricle formation" evidence=IEA;ISO] [GO:0003221 "right
ventricular cardiac muscle tissue morphogenesis" evidence=IEA;ISO]
[GO:0003222 "ventricular trabecula myocardium morphogenesis"
evidence=IEA;ISO] [GO:0003278 "apoptotic process involved in heart
morphogenesis" evidence=IEA;ISO] [GO:0003285 "septum secundum
development" evidence=IEA;ISO] [GO:0003342 "proepicardium
development" evidence=IEA;ISO] [GO:0003350 "pulmonary myocardium
development" evidence=IEA;ISO] [GO:0003677 "DNA binding"
evidence=ISO] [GO:0003682 "chromatin binding" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISO;IDA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667
"transcription factor complex" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0007507 "heart development" evidence=ISO] [GO:0007512 "adult
heart development" evidence=IEA;ISO] [GO:0008134 "transcription
factor binding" evidence=IEA;ISO] [GO:0008284 "positive regulation
of cell proliferation" evidence=IEA;ISO] [GO:0010628 "positive
regulation of gene expression" evidence=ISO] [GO:0010667 "negative
regulation of cardiac muscle cell apoptotic process"
evidence=IEA;ISO] [GO:0010735 "positive regulation of transcription
via serum response element binding" evidence=IEA;ISO] [GO:0010736
"serum response element binding" evidence=IEA;ISO] [GO:0010765
"positive regulation of sodium ion transport" evidence=IEA;ISO]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=IEA;ISO] [GO:0030097 "hemopoiesis" evidence=IEA;ISO]
[GO:0030154 "cell differentiation" evidence=ISO] [GO:0030509 "BMP
signaling pathway" evidence=IEA;ISO] [GO:0030878 "thyroid gland
development" evidence=IEA;ISO] [GO:0032355 "response to estradiol
stimulus" evidence=IEP] [GO:0035050 "embryonic heart tube
development" evidence=ISO] [GO:0042803 "protein homodimerization
activity" evidence=IEA;ISO;IDA] [GO:0043066 "negative regulation of
apoptotic process" evidence=ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA;ISO;IDA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISO] [GO:0045214 "sarcomere
organization" evidence=IEA;ISO] [GO:0045666 "positive regulation of
neuron differentiation" evidence=IEA;ISO] [GO:0045823 "positive
regulation of heart contraction" evidence=IEA;ISO] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0048738 "cardiac
muscle tissue development" evidence=ISO] [GO:0051891 "positive
regulation of cardioblast differentiation" evidence=IEA;ISO]
[GO:0055005 "ventricular cardiac myofibril development"
evidence=IEA;ISO] [GO:0055007 "cardiac muscle cell differentiation"
evidence=IEP;ISO] [GO:0055008 "cardiac muscle tissue morphogenesis"
evidence=ISO] [GO:0055117 "regulation of cardiac muscle
contraction" evidence=IEA;ISO] [GO:0060037 "pharyngeal system
development" evidence=IEA;ISO] [GO:0060038 "cardiac muscle cell
proliferation" evidence=IEA;ISO] [GO:0060043 "regulation of cardiac
muscle cell proliferation" evidence=IEA;ISO] [GO:0060047 "heart
contraction" evidence=ISO] [GO:0060048 "cardiac muscle contraction"
evidence=IEA;ISO] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IEA;ISO] [GO:0060261 "positive regulation of
transcription initiation from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0060347 "heart trabecula formation"
evidence=IEA;ISO] [GO:0060412 "ventricular septum morphogenesis"
evidence=IEA;ISO] [GO:0060413 "atrial septum morphogenesis"
evidence=IEA;ISO] [GO:0060928 "atrioventricular node cell
development" evidence=IEA;ISO] [GO:0060929 "atrioventricular node
cell fate commitment" evidence=IEA;ISO] [GO:0060971 "embryonic
heart tube left/right pattern formation" evidence=IEA;ISO]
[GO:0071363 "cellular response to growth factor stimulus"
evidence=IEP] [GO:0072358 "cardiovascular system development"
evidence=ISO] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA;ISO] [GO:1901387 "positive
regulation of voltage-gated calcium channel activity"
evidence=IEA;ISO] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:620520 GO:GO:0005634 GO:GO:0005737 GO:GO:0042803
GO:GO:0071363 GO:GO:0032355 GO:GO:0008284 GO:GO:0043565
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0003705
GO:GO:0000122 GO:GO:0055007 GO:GO:0060048 GO:GO:0045214
GO:GO:0030509 GO:GO:0060037 GO:GO:0007512 GO:GO:0045666
GO:GO:0030097 GO:GO:0001570 GO:GO:0001190 GO:GO:0010765
GO:GO:0090090 GO:GO:0001947 GO:GO:0060070 GO:GO:0045823
GO:GO:0060347 GO:GO:0010832 GO:GO:0055117 GO:GO:0001104
GO:GO:0060413 GO:GO:0060971 GO:GO:0060412 GO:GO:0003278
GO:GO:0003222 GO:GO:0030878 GO:GO:0003148 GO:GO:0060043
GO:GO:0003221 GO:GO:0051891 GO:GO:0060261 GO:GO:0010667
eggNOG:NOG310976 HOGENOM:HOG000231923 GO:GO:0003166
HOVERGEN:HBG006689 GO:GO:0060928 GO:GO:0055005 GO:GO:0003211
CTD:1482 KO:K09345 OrthoDB:EOG4K0QP6 GO:GO:0010736 GO:GO:0060929
GO:GO:0010735 GO:GO:0003342 GO:GO:0003350 GO:GO:0003168
GO:GO:0003285 EMBL:AF006664 IPI:IPI00212325 RefSeq:NP_446103.1
UniGene:Rn.6179 ProteinModelPortal:O35767 SMR:O35767 STRING:O35767
PRIDE:O35767 GeneID:114109 KEGG:rno:114109 UCSC:RGD:620520
InParanoid:O35767 NextBio:618293 Genevestigator:O35767
GermOnline:ENSRNOG00000020747 Uniprot:O35767
Length = 318
Score = 119 (46.9 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 31/83 (37%), Positives = 42/83 (50%)
Query: 91 DHHEDEGGSPRKKLRLTKP-------QFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQV 143
D E +G R+ R KP Q LE FK+ LSP ++ LA L L QV
Sbjct: 122 DKAETDGAERRRPRRRRKPRVLFSQAQVYELERRFKQQRYLSPAERDQLASVLKLTSTQV 181
Query: 144 EVWFQNRRARSKLKQTEVECELL 166
++WFQNRR + K ++ + ELL
Sbjct: 182 KIWFQNRRYKCKRQRQDQTLELL 204
>FB|FBgn0011758 [details] [associations]
symbol:B-H1 "BarH1" species:7227 "Drosophila melanogaster"
[GO:0008052 "sensory organ boundary specification" evidence=IMP]
[GO:0008057 "eye pigment granule organization" evidence=IMP]
[GO:0001751 "compound eye photoreceptor cell differentiation"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:0008407 "chaeta morphogenesis" evidence=IMP]
[GO:0007455 "eye-antennal disc morphogenesis" evidence=IMP]
[GO:0007479 "leg disc proximal/distal pattern formation"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0003677 "DNA binding"
evidence=NAS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IGI;IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003677 EMBL:AE014298
GO:GO:0007601 GO:GO:0043565 GO:GO:0050896 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0003705
GO:GO:0000122 GO:GO:0001751 GO:GO:0008057 GO:GO:0007479
GO:GO:0008407 GO:GO:0007455 GeneTree:ENSGT00700000104206
EMBL:M73079 EMBL:M73259 EMBL:M73078 EMBL:AY058309 PIR:B39369
RefSeq:NP_523387.1 UniGene:Dm.2610 ProteinModelPortal:Q24255
SMR:Q24255 DIP:DIP-19778N MINT:MINT-881308 STRING:Q24255
EnsemblMetazoa:FBtr0074430 GeneID:32724 KEGG:dme:Dmel_CG5529
CTD:32724 FlyBase:FBgn0011758 eggNOG:NOG263484 InParanoid:Q24255
KO:K09360 OMA:RFMINDI PhylomeDB:Q24255 GenomeRNAi:32724
NextBio:780048 Bgee:Q24255 GermOnline:CG5529 GO:GO:0008052
Uniprot:Q24255
Length = 544
Score = 122 (48.0 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 28/66 (42%), Positives = 40/66 (60%)
Query: 101 RKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLKQTE 160
+ + T Q TLE +F+ LS +++Q LA KL+L QV+ W+QNRR + K +QT
Sbjct: 301 KARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKWK-RQTA 359
Query: 161 VECELL 166
V ELL
Sbjct: 360 VGLELL 365
>UNIPROTKB|F1N4F7 [details] [associations]
symbol:LMX1B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0035265 "organ growth" evidence=IEA]
[GO:0035108 "limb morphogenesis" evidence=IEA] [GO:0030901
"midbrain development" evidence=IEA] [GO:0030199 "collagen fibril
organization" evidence=IEA] [GO:0021954 "central nervous system
neuron development" evidence=IEA] [GO:0021587 "cerebellum
morphogenesis" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0008219 "cell death" evidence=IEA] [GO:0002930
"trabecular meshwork development" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0001764 GO:GO:0046872 GO:GO:0008283 GO:GO:0008219
GO:GO:0071542 GO:GO:0043565 GO:GO:0008270 GO:GO:0030199
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0043010 Gene3D:2.10.110.10 GO:GO:0030901 GO:GO:0035265
GO:GO:0009953 GO:GO:0021954 GO:GO:0035108
GeneTree:ENSGT00700000104050 GO:GO:0021587 OMA:NRMEGMM
EMBL:DAAA02032139 IPI:IPI00694069 Ensembl:ENSBTAT00000038767
Uniprot:F1N4F7
Length = 294
Score = 118 (46.6 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 48/177 (27%), Positives = 78/177 (44%)
Query: 24 DHQKKNGKKLILKDDQLLPSLTLGRRSENTLKSATKEKESTDVLQQAXXXXXXXXXXXXX 83
+ Q + G + +LK+ QLL + E L S+ ES D ++
Sbjct: 39 ERQLRKGDEFVLKEGQLLCKGDYEK--EKDLLSSVSPDES-DSVKSEDEDGDMKPAKGQG 95
Query: 84 XXXKGIRDHHEDEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQV 143
KG D +D R + LT Q + +F+ S K ++ LA + L R V
Sbjct: 96 SQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVV 155
Query: 144 EVWFQNRRARSKLKQTEVECELLKRCCEKLKDEN-KRLQREV--QELKSMKLSGAPL 197
+VWFQN+RA+ K +L +R ++ + +N +RL +EV ++ M S PL
Sbjct: 156 QVWFQNQRAKMK--------KLARRHQQQQEQQNSQRLGQEVLSSRMEGMMASYTPL 204
>UNIPROTKB|F1RS26 [details] [associations]
symbol:LMX1B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0035265 "organ growth" evidence=IEA]
[GO:0035108 "limb morphogenesis" evidence=IEA] [GO:0030901
"midbrain development" evidence=IEA] [GO:0030199 "collagen fibril
organization" evidence=IEA] [GO:0021954 "central nervous system
neuron development" evidence=IEA] [GO:0021587 "cerebellum
morphogenesis" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0008219 "cell death" evidence=IEA] [GO:0002930
"trabecular meshwork development" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0001764 GO:GO:0046872 GO:GO:0008283 GO:GO:0008219
GO:GO:0071542 GO:GO:0043565 GO:GO:0008270 GO:GO:0030199
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0043010 Gene3D:2.10.110.10 GO:GO:0030901 GO:GO:0035265
GO:GO:0009953 GO:GO:0021954 GO:GO:0035108
GeneTree:ENSGT00700000104050 GO:GO:0021587 OMA:NRMEGMM
EMBL:CU062602 Ensembl:ENSSSCT00000006164 Uniprot:F1RS26
Length = 294
Score = 118 (46.6 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 48/177 (27%), Positives = 78/177 (44%)
Query: 24 DHQKKNGKKLILKDDQLLPSLTLGRRSENTLKSATKEKESTDVLQQAXXXXXXXXXXXXX 83
+ Q + G + +LK+ QLL + E L S+ ES D ++
Sbjct: 39 ERQLRKGDEFVLKEGQLLCKGDYEK--EKDLLSSVSPDES-DSVKSEDEDGDMKPAKGQG 95
Query: 84 XXXKGIRDHHEDEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQV 143
KG D +D R + LT Q + +F+ S K ++ LA + L R V
Sbjct: 96 SQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVV 155
Query: 144 EVWFQNRRARSKLKQTEVECELLKRCCEKLKDEN-KRLQREV--QELKSMKLSGAPL 197
+VWFQN+RA+ K +L +R ++ + +N +RL +EV ++ M S PL
Sbjct: 156 QVWFQNQRAKMK--------KLARRHQQQQEQQNSQRLGQEVLSSRMEGMMASYTPL 204
>FB|FBgn0038833 [details] [associations]
symbol:CG15696 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 EMBL:AE014297 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00680000099870 HSSP:P13297 FlyBase:FBgn0038833
EMBL:BT029150 RefSeq:NP_650921.1 UniGene:Dm.27353 SMR:Q9VDH9
EnsemblMetazoa:FBtr0083968 GeneID:42469 KEGG:dme:Dmel_CG15696
UCSC:CG15696-RA InParanoid:Q9VDH9 OMA:YVGTNAS GenomeRNAi:42469
NextBio:828951 Uniprot:Q9VDH9
Length = 179
Score = 112 (44.5 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 25/64 (39%), Positives = 37/64 (57%)
Query: 97 GGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKL 156
G PR + T Q LE+ +KE + LS + LA+ L L +V++WFQNRRAR +
Sbjct: 94 GRLPR--IPFTPQQLQALENAYKESNYLSAEDANKLADSLELTNTRVKIWFQNRRARERR 151
Query: 157 KQTE 160
++ E
Sbjct: 152 EKRE 155
>UNIPROTKB|E1BG70 [details] [associations]
symbol:LOC785113 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045892 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 KO:K09349 OMA:GRAESAW GeneTree:ENSGT00700000104333
EMBL:DAAA02018441 IPI:IPI00905904 RefSeq:XP_003586276.1
Ensembl:ENSBTAT00000056515 GeneID:785113 KEGG:bta:785113
Uniprot:E1BG70
Length = 347
Score = 119 (46.9 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 39/118 (33%), Positives = 53/118 (44%)
Query: 97 GGSPRKKLR--LTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARS 154
GG +KK R ++ Q LE TF LS ++ GLA L L QV++WFQNRR +
Sbjct: 199 GGGRKKKTRTVFSRSQVIPLESTFDLKRYLSSAERAGLAASLQLTETQVKIWFQNRRNKW 258
Query: 155 KLKQTEVECELLKRCCEKLKDENKRLQR-EVQELKSMKLSGAPLYMKLPAPTLTVCPS 211
K +Q E E +R+ R V +S +GA LP P P+
Sbjct: 259 K-RQLAAELE----AASLSPPGTQRMVRVPVLYHESSPAAGAAAAAALPFPLAPAAPA 311
>MGI|MGI:96204 [details] [associations]
symbol:Hoxd12 "homeobox D12" species:10090 "Mus musculus"
[GO:0001501 "skeletal system development" evidence=IMP] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007389 "pattern specification process"
evidence=IGI] [GO:0042733 "embryonic digit morphogenesis"
evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:96204 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 EMBL:CH466519 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0001501
GO:GO:0007389 GO:GO:0042733 GeneTree:ENSGT00700000104263
HOGENOM:HOG000231177 HOVERGEN:HBG052050 KO:K09297 CTD:3238
eggNOG:NOG241833 OMA:PDGLPWG OrthoDB:EOG43N7DG EMBL:X58849
EMBL:AK031206 EMBL:AL928644 EMBL:BC145656 IPI:IPI00136959
PIR:S16317 RefSeq:NP_032300.2 UniGene:Mm.57124
ProteinModelPortal:P23812 SMR:P23812 IntAct:P23812 STRING:P23812
PhosphoSite:P23812 PRIDE:P23812 Ensembl:ENSMUST00000001878
GeneID:15432 KEGG:mmu:15432 UCSC:uc008kdv.1 InParanoid:Q8BSN0
NextBio:288198 Bgee:P23812 CleanEx:MM_HOXD12 Genevestigator:P23812
GermOnline:ENSMUSG00000001823 Uniprot:P23812
Length = 268
Score = 117 (46.2 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 24/59 (40%), Positives = 39/59 (66%)
Query: 98 GSPRKKLR-LTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSK 155
G RKK + TK Q A LE+ F + ++ ++++ L+ +LNL +QV++WFQNRR + K
Sbjct: 198 GRARKKRKPYTKQQIAELENEFLVNEFINRQKRKELSNRLNLSDQQVKIWFQNRRMKKK 256
>UNIPROTKB|P35452 [details] [associations]
symbol:HOXD12 "Homeobox protein Hox-D12" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0007389 "pattern
specification process" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0000228 "nuclear chromosome"
evidence=NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0007275 "multicellular organismal development" evidence=NAS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0001501 EMBL:CH471058 GO:GO:0007389
GO:GO:0042733 GO:GO:0000228 EMBL:AC009336 HOGENOM:HOG000231177
HOVERGEN:HBG052050 KO:K09297 EMBL:AF154915 CTD:3238
eggNOG:NOG241833 OMA:PDGLPWG OrthoDB:EOG43N7DG IPI:IPI00784701
PIR:C39065 RefSeq:NP_067016.3 UniGene:Hs.450028
ProteinModelPortal:P35452 SMR:P35452 STRING:P35452
PhosphoSite:P35452 DMDM:259016345 PRIDE:P35452
Ensembl:ENST00000406506 GeneID:3238 KEGG:hsa:3238 UCSC:uc010zev.1
GeneCards:GC02P176930 H-InvDB:HIX0029976 HGNC:HGNC:5135 MIM:142988
neXtProt:NX_P35452 PharmGKB:PA29409 InParanoid:P35452
GenomeRNAi:3238 NextBio:12887 ArrayExpress:P35452 CleanEx:HS_HOXD12
Genevestigator:P35452 GermOnline:ENSG00000170178 Uniprot:P35452
Length = 270
Score = 117 (46.2 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 24/59 (40%), Positives = 39/59 (66%)
Query: 98 GSPRKKLR-LTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSK 155
G RKK + TK Q A LE+ F + ++ ++++ L+ +LNL +QV++WFQNRR + K
Sbjct: 200 GRARKKRKPYTKQQIAELENEFLVNEFINRQKRKELSNRLNLSDQQVKIWFQNRRMKKK 258
>RGD|1309797 [details] [associations]
symbol:Hoxd12 "homeo box D12" species:10116 "Rattus norvegicus"
[GO:0001501 "skeletal system development" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA;ISO] [GO:0007389 "pattern specification process"
evidence=IEA;ISO] [GO:0042733 "embryonic digit morphogenesis"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1309797 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0001501 GO:GO:0007389 GO:GO:0042733 OMA:PDGLPWG
OrthoDB:EOG43N7DG IPI:IPI00368581 Ensembl:ENSRNOT00000002154
Uniprot:D4ACD1
Length = 278
Score = 117 (46.2 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 24/59 (40%), Positives = 39/59 (66%)
Query: 98 GSPRKKLR-LTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSK 155
G RKK + TK Q A LE+ F + ++ ++++ L+ +LNL +QV++WFQNRR + K
Sbjct: 208 GRARKKRKPYTKQQIAELENEFLVNEFINRQKRKELSNRLNLSDQQVKIWFQNRRMKKK 266
>UNIPROTKB|F6ZYW8 [details] [associations]
symbol:LOC100412294 "Uncharacterized protein" species:9483
"Callithrix jacchus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=ISS] [GO:0000988 "protein
binding transcription factor activity" evidence=ISS] [GO:0001047
"core promoter binding" evidence=ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0004882 "androgen receptor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISS] [GO:0007431 "salivary gland
development" evidence=ISS] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISS] [GO:0008285 "negative regulation of
cell proliferation" evidence=ISS] [GO:0010628 "positive regulation
of gene expression" evidence=ISS] [GO:0010942 "positive regulation
of cell death" evidence=ISS] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISS] [GO:0030284
"estrogen receptor activity" evidence=ISS] [GO:0030295 "protein
kinase activator activity" evidence=ISS] [GO:0030331 "estrogen
receptor binding" evidence=ISS] [GO:0030521 "androgen receptor
signaling pathway" evidence=ISS] [GO:0033574 "response to
testosterone stimulus" evidence=ISS] [GO:0043280 "positive
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISS] [GO:0043491 "protein kinase B
signaling cascade" evidence=ISS] [GO:0043569 "negative regulation
of insulin-like growth factor receptor signaling pathway"
evidence=ISS] [GO:0043621 "protein self-association" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045931 "positive regulation of
mitotic cell cycle" evidence=ISS] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0048754 "branching morphogenesis of an epithelial tube"
evidence=ISS] [GO:0050680 "negative regulation of epithelial cell
proliferation" evidence=ISS] [GO:0051781 "positive regulation of
cell division" evidence=ISS] [GO:0060442 "branching involved in
prostate gland morphogenesis" evidence=ISS] [GO:0060664 "epithelial
cell proliferation involved in salivary gland morphogenesis"
evidence=ISS] [GO:0060770 "negative regulation of epithelial cell
proliferation involved in prostate gland development" evidence=ISS]
[GO:0071383 "cellular response to steroid hormone stimulus"
evidence=ISS] [GO:0071899 "negative regulation of estrogen receptor
binding" evidence=ISS] [GO:2000836 "positive regulation of androgen
secretion" evidence=ISS] [GO:2001022 "positive regulation of
response to DNA damage stimulus" evidence=ISS] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045892 GO:GO:0045931
GO:GO:0008284 GO:GO:0051781 GO:GO:0045944 GO:GO:0014068
GO:GO:0030295 GO:GO:0043621 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0006919 GO:GO:0010942
GO:GO:0033574 GO:GO:0001047 GO:GO:0043491 GO:GO:0000976
GO:GO:0004882 GO:GO:0030331 GO:GO:0060770 GO:GO:2001244
GO:GO:0043569 GO:GO:0048754 GeneTree:ENSGT00700000104206
GO:GO:2001022 GO:GO:0060442 GO:GO:0000988 GO:GO:0030284
GO:GO:0060664 GO:GO:0071899 GO:GO:2000836 EMBL:ACFV01082154
Ensembl:ENSCJAT00000039452 Uniprot:F6ZYW8
Length = 230
Score = 115 (45.5 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 31/81 (38%), Positives = 43/81 (53%)
Query: 100 PRKKLR--LTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLK 157
P+K+ R + Q LE F LS ++ LA+ L L QV++WFQNRR ++K K
Sbjct: 119 PQKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKRK 178
Query: 158 QTEVEC-ELLKRCCEK-LKDE 176
Q E +L KR LK+E
Sbjct: 179 QLSSELGDLEKRASSSALKEE 199
>UNIPROTKB|J9NU69 [details] [associations]
symbol:LMX1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 OMA:NRMEGMM EMBL:AAEX03006872
EMBL:AAEX03006873 Ensembl:ENSCAFT00000044276 Uniprot:J9NU69
Length = 327
Score = 118 (46.6 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 48/177 (27%), Positives = 78/177 (44%)
Query: 24 DHQKKNGKKLILKDDQLLPSLTLGRRSENTLKSATKEKESTDVLQQAXXXXXXXXXXXXX 83
+ Q + G + +LK+ QLL + E L S+ ES D ++
Sbjct: 79 ERQLRKGDEFVLKEGQLLCKGDYEK--EKDLLSSVSPDES-DSVKSEDEDGDMKPAKGQG 135
Query: 84 XXXKGIRDHHEDEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQV 143
KG D +D R + LT Q + +F+ S K ++ LA + L R V
Sbjct: 136 SQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVV 195
Query: 144 EVWFQNRRARSKLKQTEVECELLKRCCEKLKDEN-KRLQREV--QELKSMKLSGAPL 197
+VWFQN+RA+ K +L +R ++ + +N +RL +EV ++ M S PL
Sbjct: 196 QVWFQNQRAKMK--------KLARRHQQQQEQQNSQRLGQEVLSSRMEGMMASYTPL 244
>UNIPROTKB|P28362 [details] [associations]
symbol:MSX2 "Homeobox protein MSX-2" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000989 "transcription factor binding transcription factor
activity" evidence=IEA] [GO:0002063 "chondrocyte development"
evidence=IEA] [GO:0002076 "osteoblast development" evidence=IEA]
[GO:0003148 "outflow tract septum morphogenesis" evidence=IEA]
[GO:0003198 "epithelial to mesenchymal transition involved in
endocardial cushion formation" evidence=IEA] [GO:0003416
"endochondral bone growth" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0023019 "signal transduction
involved in regulation of gene expression" evidence=IEA]
[GO:0030513 "positive regulation of BMP signaling pathway"
evidence=IEA] [GO:0032792 "negative regulation of CREB
transcription factor activity" evidence=IEA] [GO:0035115 "embryonic
forelimb morphogenesis" evidence=IEA] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IEA] [GO:0035313 "wound healing,
spreading of epidermal cells" evidence=IEA] [GO:0035880 "embryonic
nail plate morphogenesis" evidence=IEA] [GO:0042640 "anagen"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045599 "negative regulation of fat cell
differentiation" evidence=IEA] [GO:0045617 "negative regulation of
keratinocyte differentiation" evidence=IEA] [GO:0045669 "positive
regulation of osteoblast differentiation" evidence=IEA] [GO:0048863
"stem cell differentiation" evidence=IEA] [GO:0051795 "positive
regulation of catagen" evidence=IEA] [GO:0060346 "bone trabecula
formation" evidence=IEA] [GO:0060364 "frontal suture morphogenesis"
evidence=IEA] [GO:0060444 "branching involved in mammary gland duct
morphogenesis" evidence=IEA] [GO:0061312 "BMP signaling pathway
involved in heart development" evidence=IEA] [GO:0070166 "enamel
mineralization" evidence=IEA] [GO:0071363 "cellular response to
growth factor stimulus" evidence=IEA] [GO:0071392 "cellular
response to estradiol stimulus" evidence=IEA] [GO:2000678 "negative
regulation of transcription regulatory region DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005737 GO:GO:0043066
GO:GO:0008285 GO:GO:0071363 GO:GO:0043565 GO:GO:0048863
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122
GO:GO:0044212 GO:GO:0030509 GO:GO:0030513 GO:GO:0035313
GO:GO:0045669 GO:GO:0045599 GO:GO:0001503 GO:GO:0071392
GO:GO:0000989 GO:GO:0023019 GO:GO:0032792
GeneTree:ENSGT00700000104129 GO:GO:2000678 eggNOG:NOG298790
HOGENOM:HOG000231922 HOVERGEN:HBG005205 KO:K09341 OrthoDB:EOG4HQDK0
GO:GO:0045617 CTD:4488 OMA:PKEASPR GO:GO:0051795 EMBL:S64478
EMBL:X62097 EMBL:X62541 IPI:IPI00597522 PIR:JS0660
RefSeq:NP_989890.1 UniGene:Gga.4977 ProteinModelPortal:P28362
SMR:P28362 STRING:P28362 PRIDE:P28362 Ensembl:ENSGALT00000004659
GeneID:395245 KEGG:gga:395245 InParanoid:P28362 NextBio:20815334
ArrayExpress:P28362 Uniprot:P28362
Length = 259
Score = 116 (45.9 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 37/120 (30%), Positives = 55/120 (45%)
Query: 89 IRDHHEDEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQ 148
+R H + PR T Q LE F++ LS ++ + LNL QV++WFQ
Sbjct: 128 LRKHKTNR--KPRTPF--TTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQ 183
Query: 149 NRRARSKLKQTEVECELLKRCCEKLKDENKRLQREVQE-LKSMKLSGA--PLYMK-LPAP 204
NRRA++K Q E E E LK + + L + +++ L G P + LP P
Sbjct: 184 NRRAKAKRLQ-EAELEKLKMAAKPMLPSGFSLPFPINSPIQAASLYGTSYPFHRPVLPIP 242
>UNIPROTKB|E2RMZ2 [details] [associations]
symbol:NKX2-6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104098 EMBL:AAEX03014361
Ensembl:ENSCAFT00000038105 NextBio:20859952 Uniprot:E2RMZ2
Length = 292
Score = 117 (46.2 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 87 KGIRDHHEDEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVW 146
+G++ E + PR + ++ Q LE FK+ LS +++ LA L L P QV++W
Sbjct: 115 EGLQQPKERQRRRPR--VLFSQAQVLALERRFKQQRYLSAPEREHLAGALQLTPTQVKIW 172
Query: 147 FQNRRARSKLKQTEVECEL 165
FQNRR + K ++ + EL
Sbjct: 173 FQNRRYKCKRQRQDKSLEL 191
>UNIPROTKB|P50221 [details] [associations]
symbol:MEOX1 "Homeobox protein MOX-1" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0001757 "somite specification" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0071837 "HMG box domain
binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0007275 "multicellular organismal development" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005730
GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:CH471178 GO:GO:0001757 EMBL:AC068675 EMBL:U10492 EMBL:U10493
EMBL:AC004149 EMBL:BC069474 EMBL:BC069506 IPI:IPI00030728
PIR:I38034 RefSeq:NP_001035091.1 RefSeq:NP_004518.1
RefSeq:NP_054705.1 UniGene:Hs.438 ProteinModelPortal:P50221
SMR:P50221 IntAct:P50221 MINT:MINT-202809 STRING:P50221
DMDM:1709078 PRIDE:P50221 DNASU:4222 Ensembl:ENST00000318579
Ensembl:ENST00000329168 GeneID:4222 KEGG:hsa:4222 UCSC:uc002idz.3
CTD:4222 GeneCards:GC17M041728 HGNC:HGNC:7013 HPA:HPA045214
MIM:600147 neXtProt:NX_P50221 PharmGKB:PA30747 eggNOG:NOG282563
HOGENOM:HOG000230987 HOVERGEN:HBG052456 InParanoid:P50221 KO:K09322
OMA:QPPAPVW OrthoDB:EOG46DM3J PhylomeDB:P50221 GenomeRNAi:4222
NextBio:16659 ArrayExpress:P50221 Bgee:P50221 CleanEx:HS_MEOX1
Genevestigator:P50221 GermOnline:ENSG00000005102 Uniprot:P50221
Length = 254
Score = 113 (44.8 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 27/62 (43%), Positives = 36/62 (58%)
Query: 96 EGGSPRKKLR--LTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRAR 153
EG S +K R TK Q LE F H+ L+ ++ +A L+L RQV+VWFQNRR +
Sbjct: 166 EGSSKARKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQVKVWFQNRRMK 225
Query: 154 SK 155
K
Sbjct: 226 WK 227
Score = 35 (17.4 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 50 SENTLKSATKEKESTD 65
+E KS+ + KES+D
Sbjct: 142 NETEKKSSRRRKESSD 157
>FB|FBgn0001269 [details] [associations]
symbol:inv "invected" species:7227 "Drosophila melanogaster"
[GO:0007386 "compartment pattern specification"
evidence=ISS;IMP;TAS] [GO:0007400 "neuroblast fate determination"
evidence=IGI] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS;NAS] [GO:0048100 "wing disc anterior/posterior pattern
formation" evidence=TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] InterPro:IPR000047 InterPro:IPR000747
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00026 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 EMBL:AE013599 GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0007400 GO:GO:0000976
GO:GO:0007476 GO:GO:0048100 GO:GO:0007386
GeneTree:ENSGT00680000099870 PROSITE:PS00033 eggNOG:NOG238866
InterPro:IPR019549 InterPro:IPR019737 Pfam:PF10525
OrthoDB:EOG4866W0 EMBL:X05273 EMBL:AY089423 EMBL:BT016097
PIR:A26628 RefSeq:NP_523699.3 RefSeq:NP_725055.2 RefSeq:NP_725056.2
RefSeq:NP_725057.2 UniGene:Dm.2797 ProteinModelPortal:P05527
SMR:P05527 IntAct:P05527 MINT:MINT-314454 STRING:P05527
EnsemblMetazoa:FBtr0088067 EnsemblMetazoa:FBtr0088068
EnsemblMetazoa:FBtr0088069 EnsemblMetazoa:FBtr0088070 GeneID:36239
KEGG:dme:Dmel_CG17835 CTD:36239 FlyBase:FBgn0001269
InParanoid:P05527 OMA:KQQMQLM PhylomeDB:P05527 GenomeRNAi:36239
NextBio:797489 Bgee:P05527 GermOnline:CG17835 Uniprot:P05527
Length = 576
Score = 121 (47.7 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 35/113 (30%), Positives = 61/113 (53%)
Query: 95 DEGGSP---RKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRR 151
D GG P R + + Q A L+ F E+ L+ K++Q L+ +L L Q+++WFQN+R
Sbjct: 464 DGGGVPEDKRPRTAFSGTQLARLKHEFNENRYLTEKRRQQLSGELGLNEAQIKIWFQNKR 523
Query: 152 ARSKLKQTEVECEL-LKRCCEKLKDENK-RLQREVQELKSMKLSGAPLYMKLP 202
A+ K K + + L L+ + L + + L RE +EL+ ++ + + K P
Sbjct: 524 AKLK-KSSGTKNPLALQLMAQGLYNHSTIPLTREEEELQELQEAASAAAAKEP 575
>UNIPROTKB|F6XRF4 [details] [associations]
symbol:HOXD12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104263 KO:K09297 CTD:3238 OMA:PDGLPWG
Ensembl:ENSCAFT00000021306 EMBL:AAEX03017786 RefSeq:XP_545535.1
GeneID:488413 KEGG:cfa:488413 Uniprot:F6XRF4
Length = 270
Score = 116 (45.9 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 24/59 (40%), Positives = 39/59 (66%)
Query: 98 GSPRKKLR-LTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSK 155
G RKK + TK Q A LE+ F + ++ ++++ L+ +LNL +QV++WFQNRR + K
Sbjct: 200 GRTRKKRKPYTKQQIAELENEFLLNEFINRQKRKELSNRLNLSDQQVKIWFQNRRMKKK 258
>UNIPROTKB|F1RZG4 [details] [associations]
symbol:HOXD12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042733 "embryonic digit morphogenesis" evidence=IEA]
[GO:0007389 "pattern specification process" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0001501 GO:GO:0007389 GO:GO:0042733
GeneTree:ENSGT00700000104263 KO:K09297 CTD:3238 OMA:PDGLPWG
EMBL:CU570829 RefSeq:XP_003483729.1 UniGene:Ssc.74532
Ensembl:ENSSSCT00000017401 GeneID:100158034 KEGG:ssc:100158034
Uniprot:F1RZG4
Length = 270
Score = 116 (45.9 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 24/59 (40%), Positives = 39/59 (66%)
Query: 98 GSPRKKLR-LTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSK 155
G RKK + TK Q A LE+ F + ++ ++++ L+ +LNL +QV++WFQNRR + K
Sbjct: 200 GRARKKRKPYTKQQIAELENEFLLNEFINRQKRKELSNRLNLSDQQVKIWFQNRRMKKK 258
>UNIPROTKB|E1BE99 [details] [associations]
symbol:HOXD12 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042733 "embryonic digit morphogenesis" evidence=IEA]
[GO:0007389 "pattern specification process" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0001501 GO:GO:0007389 GO:GO:0042733
GeneTree:ENSGT00700000104263 OMA:PDGLPWG EMBL:DAAA02004174
IPI:IPI00692097 Ensembl:ENSBTAT00000005652 Uniprot:E1BE99
Length = 271
Score = 116 (45.9 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 24/59 (40%), Positives = 39/59 (66%)
Query: 98 GSPRKKLR-LTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSK 155
G RKK + TK Q A LE+ F + ++ ++++ L+ +LNL +QV++WFQNRR + K
Sbjct: 201 GRARKKRKPYTKQQIAELENEFLLNEFINRQKRKELSNRLNLSDQQVKIWFQNRRMKKK 259
>UNIPROTKB|E1C2Y9 [details] [associations]
symbol:NKX2-6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001776 "leukocyte homeostasis" evidence=IEA]
[GO:0002317 "plasma cell differentiation" evidence=IEA] [GO:0006641
"triglyceride metabolic process" evidence=IEA] [GO:0022612 "gland
morphogenesis" evidence=IEA] [GO:0030225 "macrophage
differentiation" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0043367 "CD4-positive,
alpha-beta T cell differentiation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048535 "lymph node development"
evidence=IEA] [GO:0048536 "spleen development" evidence=IEA]
[GO:0048541 "Peyer's patch development" evidence=IEA] [GO:0048621
"post-embryonic digestive tract morphogenesis" evidence=IEA]
[GO:0050900 "leukocyte migration" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104098 EMBL:AADN02055465
IPI:IPI00818829 Ensembl:ENSGALT00000040980 Uniprot:E1C2Y9
Length = 173
Score = 110 (43.8 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 23/74 (31%), Positives = 40/74 (54%)
Query: 92 HHEDEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRR 151
HH + + ++ ++ Q LE FK+ LS +++ LA L L QV++WFQNRR
Sbjct: 59 HHPKQPQRRKPRVLFSQTQVLELERRFKQQKYLSALEREHLANVLQLTSTQVKIWFQNRR 118
Query: 152 ARSKLKQTEVECEL 165
+ K ++ + E+
Sbjct: 119 YKCKRQRQDRSLEM 132
>ZFIN|ZDB-GENE-980526-306 [details] [associations]
symbol:msxc "muscle segment homeobox C"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0043049 "otic placode formation" evidence=IGI]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980526-306 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0043049 HOGENOM:HOG000231922 HOVERGEN:HBG005205 HSSP:P14653
EMBL:BC071302 IPI:IPI00490987 UniGene:Dr.32741
ProteinModelPortal:Q6IQV1 SMR:Q6IQV1 STRING:Q6IQV1
InParanoid:Q6IQV1 ArrayExpress:Q6IQV1 Uniprot:Q6IQV1
Length = 274
Score = 116 (45.9 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 31/85 (36%), Positives = 43/85 (50%)
Query: 89 IRDHHEDEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQ 148
+R H + PR T Q LE F++ LS ++ + LNL QV++WFQ
Sbjct: 146 LRKHKNNR--KPRTPF--TTSQLLALERKFRQKQYLSIAERAEFSNSLNLTETQVKIWFQ 201
Query: 149 NRRARSKLKQTEVECELLKRCCEKL 173
NRRA++K Q E E E LK + L
Sbjct: 202 NRRAKAKRLQ-EAELEKLKLATKPL 225
>UNIPROTKB|F1NE15 [details] [associations]
symbol:LOC100858551 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009954 "proximal/distal pattern
formation" evidence=IEA] [GO:0030879 "mammary gland development"
evidence=IEA] [GO:0035115 "embryonic forelimb morphogenesis"
evidence=IEA] [GO:0048706 "embryonic skeletal system development"
evidence=IEA] [GO:0060216 "definitive hemopoiesis" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005737 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GeneTree:ENSGT00700000104054 EMBL:AADN02000988 IPI:IPI00821899
Ensembl:ENSGALT00000018034 Uniprot:F1NE15
Length = 60
Score = 98 (39.6 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 22/55 (40%), Positives = 32/55 (58%)
Query: 101 RKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSK 155
+K+ TK Q LE F + L+ ++ +A LNL RQV++WFQNRR + K
Sbjct: 3 KKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMK 57
>UNIPROTKB|F1NHF8 [details] [associations]
symbol:CDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000976 EMBL:AADN02013531
IPI:IPI00819450 Ensembl:ENSGALT00000039481 Uniprot:F1NHF8
Length = 60
Score = 98 (39.6 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 101 RKKLRL--TKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSK 155
R+K R+ T Q LE F + ++ ++K LA L L RQV++WFQNRRA+ +
Sbjct: 1 REKYRVVYTDHQRLELEKEFHYNRYITIRRKSELAANLRLSERQVKIWFQNRRAKER 57
>UNIPROTKB|H9L2H7 [details] [associations]
symbol:Gga.20677 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:AADN02023992
Ensembl:ENSGALT00000035897 Uniprot:H9L2H7
Length = 95
Score = 98 (39.6 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 101 RKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLKQTE 160
+K+ TK Q LE F + L+ +++ +++ +NL RQV++WFQNRR + K E
Sbjct: 23 KKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRRMKLKKMNRE 82
>UNIPROTKB|H9L2H8 [details] [associations]
symbol:Gga.20677 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:AADN02023992
Ensembl:ENSGALT00000035898 Uniprot:H9L2H8
Length = 99
Score = 98 (39.6 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 101 RKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLKQTE 160
+K+ TK Q LE F + L+ +++ +++ +NL RQV++WFQNRR + K E
Sbjct: 27 KKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRRMKLKKMNRE 86
>UNIPROTKB|P15142 [details] [associations]
symbol:CHOX-7 "Homeobox protein CHOX-7" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 EMBL:X16159 IPI:IPI00683482 PIR:S05005
UniGene:Gga.190 ProteinModelPortal:P15142 SMR:P15142
HOVERGEN:HBG100178 Uniprot:P15142
Length = 124
Score = 98 (39.6 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 23/59 (38%), Positives = 31/59 (52%)
Query: 97 GGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSK 155
G S R++ T Q LE F LS ++ +A L L QV++WFQNRRA+ K
Sbjct: 22 GKSRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWK 80
>UNIPROTKB|D6RAR5 [details] [associations]
symbol:D6RAR5 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AC004080
HOGENOM:HOG000294138 IPI:IPI00382764 ProteinModelPortal:D6RAR5
SMR:D6RAR5 Ensembl:ENST00000470747 Uniprot:D6RAR5
Length = 112
Score = 98 (39.6 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 22/55 (40%), Positives = 32/55 (58%)
Query: 101 RKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSK 155
+K+ TK Q LE F + L+ ++ +A LNL RQV++WFQNRR + K
Sbjct: 48 KKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMK 102
>RGD|1564874 [details] [associations]
symbol:Nkx1-1 "NK1 transcription factor related, locus 1
(Drosophila)" species:10116 "Rattus norvegicus" [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043467 "regulation of generation of precursor
metabolites and energy" evidence=IEA;ISO] [GO:0050877 "neurological
system process" evidence=IEA;ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1564874 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GO:GO:0050877 GeneTree:ENSGT00660000095141
GO:GO:0043467 IPI:IPI00766731 ProteinModelPortal:F1M5E3 SMR:F1M5E3
Ensembl:ENSRNOT00000057911 Uniprot:F1M5E3
Length = 60
Score = 98 (39.6 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 25/60 (41%), Positives = 34/60 (56%)
Query: 100 PRK-KLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLKQ 158
PR+ + T Q LE+ FK LS ++ LA L+L QV++WFQNRR + K KQ
Sbjct: 1 PRRARTAFTYEQLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWK-KQ 59
>RGD|1588601 [details] [associations]
symbol:Hoxd3 "homeo box D3" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0007160 "cell-matrix adhesion" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA;ISO]
[GO:0010628 "positive regulation of gene expression"
evidence=IEA;ISO] [GO:0021615 "glossopharyngeal nerve
morphogenesis" evidence=IEA;ISO] [GO:0030878 "thyroid gland
development" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045666 "positive regulation of neuron
differentiation" evidence=IEA;ISO] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA;ISO] [GO:0051216 "cartilage
development" evidence=IEA;ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1588601
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG284589 EMBL:M37569 IPI:IPI00195537
PIR:E43559 UniGene:Rn.223085 ProteinModelPortal:P18867 SMR:P18867
STRING:P18867 UCSC:RGD:1588601 HOVERGEN:HBG052632
Genevestigator:P18867 Uniprot:P18867
Length = 114
Score = 98 (39.6 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 22/59 (37%), Positives = 31/59 (52%)
Query: 100 PRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLKQ 158
PR T Q LE F + L +++ +A LNL RQ+++WFQNRR + K Q
Sbjct: 12 PRGCTAYTSAQLVELEKEFHFNRYLCRRRRVEMANLLNLTERQIKIWFQNRRMKYKKDQ 70
>UNIPROTKB|P18867 [details] [associations]
symbol:Hoxd3 "Homeobox protein Hox-D3" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1588601
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG284589 EMBL:M37569 IPI:IPI00195537
PIR:E43559 UniGene:Rn.223085 ProteinModelPortal:P18867 SMR:P18867
STRING:P18867 UCSC:RGD:1588601 HOVERGEN:HBG052632
Genevestigator:P18867 Uniprot:P18867
Length = 114
Score = 98 (39.6 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 22/59 (37%), Positives = 31/59 (52%)
Query: 100 PRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLKQ 158
PR T Q LE F + L +++ +A LNL RQ+++WFQNRR + K Q
Sbjct: 12 PRGCTAYTSAQLVELEKEFHFNRYLCRRRRVEMANLLNLTERQIKIWFQNRRMKYKKDQ 70
>WB|WBGene00000428 [details] [associations]
symbol:ceh-1 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00660000095141 EMBL:FO080880 EMBL:X52810 PIR:S13128
PIR:T16081 PIR:T37298 RefSeq:NP_508796.1 ProteinModelPortal:P53547
SMR:P53547 EnsemblMetazoa:F16H11.4.1 EnsemblMetazoa:F16H11.4.2
GeneID:191614 KEGG:cel:CELE_F16H11.4 UCSC:F16H11.4 CTD:191614
WormBase:F16H11.4 eggNOG:NOG286158 HOGENOM:HOG000020299
InParanoid:P53547 OMA:DANTPQT NextBio:949682 Uniprot:P53547
Length = 132
Score = 98 (39.6 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 101 RKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSK 155
R + T Q LE+ FK LS ++ LA +L L QV++WFQNRR + K
Sbjct: 3 RARTAFTYEQLVALENKFKTSRYLSVVERLNLAIQLQLSETQVKIWFQNRRTKWK 57
>UNIPROTKB|J9NVF8 [details] [associations]
symbol:NKX2-4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104098 EMBL:AAEX03013750 OMA:CQNGAAT
Ensembl:ENSCAFT00000047608 Uniprot:J9NVF8
Length = 207
Score = 113 (44.8 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 24/72 (33%), Positives = 43/72 (59%)
Query: 99 SPRKKLRL--TKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKL 156
+PR+K R+ ++ Q LE FK+ LS +++ LA ++L P QV++WFQN R + K
Sbjct: 37 APRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKR 96
Query: 157 KQTEVECELLKR 168
+ + + L++
Sbjct: 97 QAKDKAAQQLQQ 108
>UNIPROTKB|E2R6Q3 [details] [associations]
symbol:HOXD12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
Ensembl:ENSCAFT00000021306 Uniprot:E2R6Q3
Length = 280
Score = 116 (45.9 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 24/59 (40%), Positives = 39/59 (66%)
Query: 98 GSPRKKLR-LTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSK 155
G RKK + TK Q A LE+ F + ++ ++++ L+ +LNL +QV++WFQNRR + K
Sbjct: 210 GRTRKKRKPYTKQQIAELENEFLLNEFINRQKRKELSNRLNLSDQQVKIWFQNRRMKKK 268
>MGI|MGI:1100513 [details] [associations]
symbol:Lmx1b "LIM homeobox transcription factor 1 beta"
species:10090 "Mus musculus" [GO:0001764 "neuron migration"
evidence=IMP] [GO:0002930 "trabecular meshwork development"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008219 "cell death" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IMP] [GO:0010468 "regulation of gene
expression" evidence=IMP] [GO:0021587 "cerebellum morphogenesis"
evidence=IMP] [GO:0021954 "central nervous system neuron
development" evidence=IMP] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0030199 "collagen fibril organization"
evidence=IMP] [GO:0030326 "embryonic limb morphogenesis"
evidence=NAS] [GO:0030901 "midbrain development" evidence=IMP]
[GO:0035108 "limb morphogenesis" evidence=IMP] [GO:0035265 "organ
growth" evidence=IMP] [GO:0043010 "camera-type eye development"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0071542 "dopaminergic neuron
differentiation" evidence=IMP] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 EMBL:AF078166
MGI:MGI:1100513 GO:GO:0005634 GO:GO:0001764 GO:GO:0046872
GO:GO:0008283 GO:GO:0008219 GO:GO:0071542 GO:GO:0043565
GO:GO:0008270 GO:GO:0030199 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GO:GO:0030326 GO:GO:0030901 GO:GO:0035265 EMBL:CH466542
GO:GO:0009953 GO:GO:0021954 GeneTree:ENSGT00700000104050
GO:GO:0021587 HOGENOM:HOG000231629 eggNOG:NOG243427
HOVERGEN:HBG052335 KO:K09371 OrthoDB:EOG4QFWDN CTD:4010
EMBL:AL929212 EMBL:BC119169 EMBL:BC125469 IPI:IPI00132794
RefSeq:NP_034855.2 UniGene:Mm.39825 ProteinModelPortal:O88609
SMR:O88609 STRING:O88609 PhosphoSite:O88609 PRIDE:O88609
Ensembl:ENSMUST00000041730 GeneID:16917 KEGG:mmu:16917
InParanoid:Q0VEN6 OMA:NRMEGMM NextBio:290964 Bgee:O88609
CleanEx:MM_LMX1B Genevestigator:O88609
GermOnline:ENSMUSG00000038765 GO:GO:0002930 Uniprot:O88609
Length = 372
Score = 118 (46.6 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 48/177 (27%), Positives = 78/177 (44%)
Query: 24 DHQKKNGKKLILKDDQLLPSLTLGRRSENTLKSATKEKESTDVLQQAXXXXXXXXXXXXX 83
+ Q + G + +LK+ QLL + E L S+ ES D ++
Sbjct: 124 ERQLRKGDEFVLKEGQLLCKGDYEK--EKDLLSSVSPDES-DSVKSEDEDGDMKPAKGQG 180
Query: 84 XXXKGIRDHHEDEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQV 143
KG D +D R + LT Q + +F+ S K ++ LA + L R V
Sbjct: 181 SQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVV 240
Query: 144 EVWFQNRRARSKLKQTEVECELLKRCCEKLKDEN-KRLQREV--QELKSMKLSGAPL 197
+VWFQN+RA+ K +L +R ++ + +N +RL +EV ++ M S PL
Sbjct: 241 QVWFQNQRAKMK--------KLARRHQQQQEQQNSQRLGQEVLSSRMEGMMASYTPL 289
>MGI|MGI:1342288 [details] [associations]
symbol:Lbx2 "ladybird homeobox homolog 2 (Drosophila)"
species:10090 "Mus musculus" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:1342288 GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00700000104206 HSSP:P13297
HOGENOM:HOG000007247 HOVERGEN:HBG006244 KO:K09353 CTD:85474
eggNOG:NOG235470 OMA:MVPRAPS EMBL:AF146150 EMBL:AK002897
EMBL:BC109347 IPI:IPI00624409 RefSeq:NP_034822.1 UniGene:Mm.20359
ProteinModelPortal:Q9WUN8 SMR:Q9WUN8 PhosphoSite:Q9WUN8
PRIDE:Q9WUN8 Ensembl:ENSMUST00000041265 GeneID:16815 KEGG:mmu:16815
UCSC:uc009cmi.1 InParanoid:Q9WUN8 OrthoDB:EOG4NKBWK NextBio:290696
Bgee:Q9WUN8 CleanEx:MM_LBX2 Genevestigator:Q9WUN8 Uniprot:Q9WUN8
Length = 195
Score = 112 (44.5 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 27/71 (38%), Positives = 36/71 (50%)
Query: 101 RKKLR--LTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLKQ 158
R+K R T Q LE F L+P ++ GLA +L L QV WFQNRRA+ K
Sbjct: 84 RRKSRTAFTAQQVLELERRFVFQKYLAPSERDGLAARLGLANAQVVTWFQNRRAKLKRDV 143
Query: 159 TEVECELLKRC 169
E+ ++ C
Sbjct: 144 EEMRADVASLC 154
>UNIPROTKB|O60663 [details] [associations]
symbol:LMX1B "LIM homeobox transcription factor 1-beta"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0001701 "in utero embryonic development" evidence=NAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030182 "neuron differentiation" evidence=ISS] [GO:0007275
"multicellular organismal development" evidence=NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009953 "dorsal/ventral pattern formation" evidence=ISS]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0030182 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 EMBL:CH471090 GO:GO:0001701
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0009953 HOGENOM:HOG000231629
eggNOG:NOG243427 HOVERGEN:HBG052335 KO:K09371 OrthoDB:EOG4QFWDN
CTD:4010 EMBL:AF057135 EMBL:AF059575 EMBL:AF059572 EMBL:AF059573
EMBL:AF059574 EMBL:AL161908 EMBL:AL161731 EMBL:BC069601
EMBL:BC112120 EMBL:BC113491 IPI:IPI00030989 IPI:IPI00220363
RefSeq:NP_001167618.1 RefSeq:NP_002307.2 UniGene:Hs.129133
ProteinModelPortal:O60663 SMR:O60663 IntAct:O60663 STRING:O60663
PhosphoSite:O60663 PaxDb:O60663 PRIDE:O60663 DNASU:4010
Ensembl:ENST00000373474 Ensembl:ENST00000425646 GeneID:4010
KEGG:hsa:4010 UCSC:uc004bqj.3 GeneCards:GC09P129376 HGNC:HGNC:6654
MIM:161200 MIM:602575 neXtProt:NX_O60663 Orphanet:2614
PharmGKB:PA30417 InParanoid:O60663 PhylomeDB:O60663 GenomeRNAi:4010
NextBio:15732 ArrayExpress:O60663 Bgee:O60663 CleanEx:HS_LMX1B
Genevestigator:O60663 GermOnline:ENSG00000136944 Uniprot:O60663
Length = 379
Score = 118 (46.6 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 48/177 (27%), Positives = 78/177 (44%)
Query: 24 DHQKKNGKKLILKDDQLLPSLTLGRRSENTLKSATKEKESTDVLQQAXXXXXXXXXXXXX 83
+ Q + G + +LK+ QLL + E L S+ ES D ++
Sbjct: 124 ERQLRKGDEFVLKEGQLLCKGDYEK--EKDLLSSVSPDES-DSVKSEDEDGDMKPAKGQG 180
Query: 84 XXXKGIRDHHEDEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQV 143
KG D +D R + LT Q + +F+ S K ++ LA + L R V
Sbjct: 181 SQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVV 240
Query: 144 EVWFQNRRARSKLKQTEVECELLKRCCEKLKDEN-KRLQREV--QELKSMKLSGAPL 197
+VWFQN+RA+ K +L +R ++ + +N +RL +EV ++ M S PL
Sbjct: 241 QVWFQNQRAKMK--------KLARRHQQQQEQQNSQRLGQEVLSSRMEGMMASYTPL 289
>RGD|1306149 [details] [associations]
symbol:Nkx2-6 "NK2 homeobox 6" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0007507 "heart development" evidence=ISO] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA;ISO] [GO:0021854
"hypothalamus development" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=ISO] [GO:0035050 "embryonic heart tube
development" evidence=IEA;ISO] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA;ISO] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0043586 "tongue development"
evidence=IEA] [GO:0048565 "digestive tract development"
evidence=IEA] [GO:0055014 "atrial cardiac muscle cell development"
evidence=IEA] [GO:0055015 "ventricular cardiac muscle cell
development" evidence=IEA] [GO:0060037 "pharyngeal system
development" evidence=IEA;ISO] [GO:0060039 "pericardium
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1306149 GO:GO:0005634 GO:GO:0043066 GO:GO:0008284
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060037
GO:GO:0048565 GO:GO:0055015 GO:GO:0021854 GO:GO:0060039
GO:GO:0035050 GO:GO:0043586 GO:GO:0055014
GeneTree:ENSGT00700000104098 HOGENOM:HOG000231923
HOVERGEN:HBG006689 OrthoDB:EOG4WM4WF CTD:137814 eggNOG:NOG301183
KO:K09346 EMBL:BC160896 IPI:IPI00359714 RefSeq:NP_001121125.1
UniGene:Rn.137335 SMR:B1H280 Ensembl:ENSRNOT00000032826
GeneID:364418 KEGG:rno:364418 UCSC:RGD:1306149 NextBio:685372
Genevestigator:B1H280 Uniprot:B1H280
Length = 213
Score = 113 (44.8 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 26/68 (38%), Positives = 40/68 (58%)
Query: 100 PRKKLRL--TKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLK 157
PR+K R+ ++ Q LE FK+ LS +++ LA L L QV++WFQNRR + K +
Sbjct: 49 PRRKPRVLFSQAQVLALERRFKQQRYLSAPEREHLASVLQLTSTQVKIWFQNRRYKCKRQ 108
Query: 158 QTEVECEL 165
+ + EL
Sbjct: 109 RQDQTLEL 116
>UNIPROTKB|F8VYP0 [details] [associations]
symbol:LMX1B "LIM homeobox transcription factor 1-beta"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 KO:K09371 CTD:4010 EMBL:AL161908 EMBL:AL161731
IPI:IPI00220363 RefSeq:NP_002307.2 UniGene:Hs.129133 DNASU:4010
GeneID:4010 KEGG:hsa:4010 HGNC:HGNC:6654 GenomeRNAi:4010
NextBio:15732 ProteinModelPortal:F8VYP0 SMR:F8VYP0 PRIDE:F8VYP0
Ensembl:ENST00000526117 UCSC:uc004bqi.3 ArrayExpress:F8VYP0
Bgee:F8VYP0 Uniprot:F8VYP0
Length = 395
Score = 118 (46.6 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 48/177 (27%), Positives = 78/177 (44%)
Query: 24 DHQKKNGKKLILKDDQLLPSLTLGRRSENTLKSATKEKESTDVLQQAXXXXXXXXXXXXX 83
+ Q + G + +LK+ QLL + E L S+ ES D ++
Sbjct: 147 ERQLRKGDEFVLKEGQLLCKGDYEK--EKDLLSSVSPDES-DSVKSEDEDGDMKPAKGQG 203
Query: 84 XXXKGIRDHHEDEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQV 143
KG D +D R + LT Q + +F+ S K ++ LA + L R V
Sbjct: 204 SQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVV 263
Query: 144 EVWFQNRRARSKLKQTEVECELLKRCCEKLKDEN-KRLQREV--QELKSMKLSGAPL 197
+VWFQN+RA+ K +L +R ++ + +N +RL +EV ++ M S PL
Sbjct: 264 QVWFQNQRAKMK--------KLARRHQQQQEQQNSQRLGQEVLSSRMEGMMASYTPL 312
>UNIPROTKB|E1BIE8 [details] [associations]
symbol:LOC527892 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060039
"pericardium development" evidence=IEA] [GO:0060037 "pharyngeal
system development" evidence=IEA] [GO:0055015 "ventricular cardiac
muscle cell development" evidence=IEA] [GO:0055014 "atrial cardiac
muscle cell development" evidence=IEA] [GO:0048565 "digestive tract
development" evidence=IEA] [GO:0043586 "tongue development"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0035050 "embryonic heart tube
development" evidence=IEA] [GO:0021854 "hypothalamus development"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043066
GO:GO:0008284 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0060037 GO:GO:0048565 GO:GO:0055015 GO:GO:0021854
GO:GO:0060039 GO:GO:0035050 GO:GO:0043586 GO:GO:0055014
GeneTree:ENSGT00700000104098 OMA:SEQPKAR EMBL:DAAA02023595
IPI:IPI00903703 Ensembl:ENSBTAT00000018610 Uniprot:E1BIE8
Length = 300
Score = 116 (45.9 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 30/81 (37%), Positives = 44/81 (54%)
Query: 88 GIR-DHHEDEGGSPRKKLRL--TKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVE 144
G R D E PR+K R+ ++ Q LE FK+ LS +++ LA L L QV+
Sbjct: 119 GARGDGAEHPIARPRRKPRVLFSQAQVLALERRFKQQRYLSAPEREHLASALQLTSTQVK 178
Query: 145 VWFQNRRARSKLKQTEVECEL 165
+WFQNRR + K ++ + EL
Sbjct: 179 IWFQNRRYKCKRQRQDKSLEL 199
>UNIPROTKB|P24341 [details] [associations]
symbol:HOXD10 "Homeobox protein Hox-D10" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:D10287 IPI:IPI00593695
PIR:A37914 UniGene:Gga.20677 ProteinModelPortal:P24341 SMR:P24341
eggNOG:KOG0487 Uniprot:P24341
Length = 95
Score = 97 (39.2 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 101 RKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLKQTE 160
+K+ TK Q LE F + L+ +++ +++ +NL RQV++WFQNRR + K E
Sbjct: 23 KKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRRMKLKKMSRE 82
>RGD|1308521 [details] [associations]
symbol:Nkx2-3 "NK2 homeobox 3" species:10116 "Rattus norvegicus"
[GO:0001776 "leukocyte homeostasis" evidence=IEA;ISO] [GO:0002317
"plasma cell differentiation" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006641 "triglyceride metabolic process"
evidence=IEA;ISO] [GO:0006955 "immune response" evidence=ISO]
[GO:0008150 "biological_process" evidence=ND] [GO:0009791
"post-embryonic development" evidence=ISO] [GO:0022612 "gland
morphogenesis" evidence=IEA;ISO] [GO:0030183 "B cell
differentiation" evidence=ISO] [GO:0030225 "macrophage
differentiation" evidence=IEA;ISO] [GO:0042127 "regulation of cell
proliferation" evidence=IEA;ISO] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA;ISO] [GO:0043367
"CD4-positive, alpha-beta T cell differentiation" evidence=IEA;ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0048535 "lymph node
development" evidence=IEA;ISO] [GO:0048536 "spleen development"
evidence=IEA;ISO] [GO:0048537 "mucosal-associated lymphoid tissue
development" evidence=ISO] [GO:0048541 "Peyer's patch development"
evidence=IEA;ISO] [GO:0048565 "digestive tract development"
evidence=ISO] [GO:0048621 "post-embryonic digestive tract
morphogenesis" evidence=IEA;ISO] [GO:0050900 "leukocyte migration"
evidence=IEA;ISO] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1308521 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:CH473986 GeneTree:ENSGT00700000104098 CTD:159296 KO:K09343
OrthoDB:EOG4WM4WF IPI:IPI00781760 RefSeq:NP_001101064.1
UniGene:Rn.91986 Ensembl:ENSRNOT00000054714 GeneID:309389
KEGG:rno:309389 UCSC:RGD:1308521 NextBio:660688 Uniprot:D3ZZC9
Length = 362
Score = 117 (46.2 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 32/111 (28%), Positives = 51/111 (45%)
Query: 56 SATKEKESTDVLQQAXXXXXXXXXXXXXXXXKGIRDHHEDEGGSPRK-KLRLTKPQFATL 114
S KE+E V +++ K D + S RK ++ ++ Q L
Sbjct: 101 SGPKEQEEEVVSERSQKSCQLKKSLEAAGDCKASEDGERPKPRSRRKPRVLFSQAQVFEL 160
Query: 115 EDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLKQTEVECEL 165
E FK+ LS +++ LA L L QV++WFQNRR + K ++ + EL
Sbjct: 161 ERRFKQQRYLSAPEREHLASSLKLTSTQVKIWFQNRRYKCKRQRQDKSLEL 211
>ZFIN|ZDB-GENE-990415-118 [details] [associations]
symbol:hoxd12a "homeo box D12a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-990415-118 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104263 HOGENOM:HOG000231177
HOVERGEN:HBG052050 KO:K09297 EMBL:BX322661 IPI:IPI00499135
RefSeq:NP_001119958.1 UniGene:Dr.151901 UniGene:Dr.75799
Ensembl:ENSDART00000082339 GeneID:100006598 KEGG:dre:100006598
CTD:100006598 NextBio:20787185 Uniprot:B0S5Y9
Length = 277
Score = 115 (45.5 bits), Expect = 0.00010, P = 0.00010
Identities = 21/57 (36%), Positives = 38/57 (66%)
Query: 99 SPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSK 155
S +K+ TKPQ LE+ F + ++ ++++ L+++L L +QV++WFQNRR + K
Sbjct: 209 SRKKRKPYTKPQLTELENEFMMNEFINRQKRKELSDRLELSDQQVKIWFQNRRMKKK 265
>UNIPROTKB|G3V877 [details] [associations]
symbol:Lmx1b "LIM homeobox transcription factor 1 beta"
species:10116 "Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=IEA] [GO:0002930 "trabecular meshwork development"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008219 "cell death" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0021587 "cerebellum morphogenesis" evidence=IEA]
[GO:0021954 "central nervous system neuron development"
evidence=IEA] [GO:0030199 "collagen fibril organization"
evidence=IEA] [GO:0030901 "midbrain development" evidence=IEA]
[GO:0035108 "limb morphogenesis" evidence=IEA] [GO:0035265 "organ
growth" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
RGD:620843 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 EMBL:CH474001 OMA:NRMEGMM
UniGene:Rn.92364 Ensembl:ENSRNOT00000022953 Uniprot:G3V877
Length = 372
Score = 117 (46.2 bits), Expect = 0.00010, P = 0.00010
Identities = 48/177 (27%), Positives = 78/177 (44%)
Query: 24 DHQKKNGKKLILKDDQLLPSLTLGRRSENTLKSATKEKESTDVLQQAXXXXXXXXXXXXX 83
+ Q + G + +LK+ QLL + E L S+ ES D ++
Sbjct: 124 ERQLRKGDEFVLKEGQLLCKGDYEK--EKDLLSSVSPDES-DSVKSEDEDGDMKPAKGQG 180
Query: 84 XXXKGIRDHHEDEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQV 143
KG D +D R + LT Q + +F+ S K ++ LA + L R V
Sbjct: 181 SQNKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVV 240
Query: 144 EVWFQNRRARSKLKQTEVECELLKRCCEKLKDEN-KRLQREV--QELKSMKLSGAPL 197
+VWFQN+RA+ K +L +R ++ + +N +RL +EV ++ M S PL
Sbjct: 241 QVWFQNQRAKMK--------KLARRHQQQQEQQNSQRLGQEVLSSRMEGMMASYTPL 289
>MGI|MGI:103220 [details] [associations]
symbol:Meox1 "mesenchyme homeobox 1" species:10090 "Mus
musculus" [GO:0001757 "somite specification" evidence=IGI]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI;IDA]
[GO:0071837 "HMG box domain binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
MGI:MGI:103220 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001757 CTD:4222
eggNOG:NOG282563 HOGENOM:HOG000230987 HOVERGEN:HBG052456 KO:K09322
OMA:QPPAPVW OrthoDB:EOG46DM3J EMBL:Z15103 EMBL:BC011082
IPI:IPI00108443 PIR:A49122 RefSeq:NP_034921.1 UniGene:Mm.3404
ProteinModelPortal:P32442 SMR:P32442 STRING:P32442 PRIDE:P32442
Ensembl:ENSMUST00000057054 GeneID:17285 KEGG:mmu:17285
NextBio:291792 Bgee:P32442 CleanEx:MM_MEOX1 Genevestigator:P32442
GermOnline:ENSMUSG00000001493 Uniprot:P32442
Length = 253
Score = 114 (45.2 bits), Expect = 0.00011, P = 0.00011
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 91 DHHEDEGGSP------RK-KLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQV 143
D+ E+ GG P RK + TK Q LE F H+ L+ ++ +A L+L RQV
Sbjct: 155 DNQENGGGKPEGSSKARKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQV 214
Query: 144 EVWFQNRRARSK 155
+VWFQNRR + K
Sbjct: 215 KVWFQNRRMKWK 226
>UNIPROTKB|A2VDR0 [details] [associations]
symbol:MEOX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071837 "HMG box domain binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0001757 "somite specification"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001757
GeneTree:ENSGT00660000095141 CTD:4222 eggNOG:NOG282563
HOGENOM:HOG000230987 HOVERGEN:HBG052456 KO:K09322 OMA:QPPAPVW
OrthoDB:EOG46DM3J EMBL:DAAA02049232 EMBL:BC133359 IPI:IPI00702466
RefSeq:NP_001030453.2 UniGene:Bt.65876 SMR:A2VDR0
Ensembl:ENSBTAT00000054676 GeneID:529059 KEGG:bta:529059
InParanoid:A2VDR0 NextBio:20874954 Uniprot:A2VDR0
Length = 254
Score = 114 (45.2 bits), Expect = 0.00011, P = 0.00011
Identities = 38/142 (26%), Positives = 56/142 (39%)
Query: 16 ALPQSDDHDHQKKNGKKLILKDDQLLPSLTLGRRSENTLKSATKEKESTDVLQQAXXXXX 75
A PQ D ++ L + S +G S + + E +VL
Sbjct: 87 AFPQPPDWHFPVSEARRR-LNPGPVGGSKEIGANSPGLVDTTGGPGEDYEVLGSTANETE 145
Query: 76 XXXXXXXXXXXKGIRDHHEDEGGSPRKKLR--LTKPQFATLEDTFKEHSTLSPKQKQGLA 133
+ + EG S +K R TK Q LE F H+ L+ ++ +A
Sbjct: 146 KKSTRRKKENSDNQENRAKPEGASKARKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIA 205
Query: 134 EKLNLRPRQVEVWFQNRRARSK 155
L+L RQV+VWFQNRR + K
Sbjct: 206 VNLDLSERQVKVWFQNRRMKWK 227
>TAIR|locus:2134088 [details] [associations]
symbol:HB-8 "AT4G32880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0010089 "xylem development"
evidence=RCA;IMP] [GO:0045597 "positive regulation of cell
differentiation" evidence=IMP] [GO:0009733 "response to auxin
stimulus" evidence=IEP] [GO:0010014 "meristem initiation"
evidence=RCA;IMP] [GO:0010072 "primary shoot apical meristem
specification" evidence=RCA;IMP] [GO:0010067 "procambium
histogenesis" evidence=IEP] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA]
[GO:0009855 "determination of bilateral symmetry" evidence=RCA]
[GO:0009880 "embryonic pattern specification" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009888 "tissue
development" evidence=RCA] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA] [GO:0010090 "trichome
morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0010431 "seed maturation" evidence=RCA] [GO:0010638 "positive
regulation of organelle organization" evidence=RCA] [GO:0016049
"cell growth" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042546 "cell wall biogenesis"
evidence=RCA] [GO:0044036 "cell wall macromolecule metabolic
process" evidence=RCA] [GO:0045010 "actin nucleation" evidence=RCA]
[GO:0045595 "regulation of cell differentiation" evidence=RCA]
[GO:0048589 "developmental growth" evidence=RCA] [GO:0048765 "root
hair cell differentiation" evidence=RCA] [GO:0051301 "cell
division" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] InterPro:IPR001356 InterPro:IPR004827
InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00338 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
GO:GO:0030154 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009733
GO:GO:0008284 GO:GO:0043565 GO:GO:0045597 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010072
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 GO:GO:0010089 KO:K09338 HSSP:P10037
HOGENOM:HOG000272677 ProtClustDB:CLSN2679470 InterPro:IPR013978
Pfam:PF08670 EMBL:AL161582 EMBL:Z50851 EMBL:AJ441292 EMBL:AY099631
EMBL:BT008798 IPI:IPI00546637 PIR:T10695 RefSeq:NP_195014.1
UniGene:At.31628 ProteinModelPortal:Q39123 SMR:Q39123 IntAct:Q39123
STRING:Q39123 PaxDb:Q39123 PRIDE:Q39123 EnsemblPlants:AT4G32880.1
GeneID:829424 KEGG:ath:AT4G32880 TAIR:At4g32880 eggNOG:NOG325934
InParanoid:Q39123 OMA:DAVMCCS PhylomeDB:Q39123
Genevestigator:Q39123 GO:GO:0010067 Uniprot:Q39123
Length = 833
Score = 121 (47.7 bits), Expect = 0.00011, P = 0.00011
Identities = 34/104 (32%), Positives = 52/104 (50%)
Query: 92 HHEDEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKL----NLRPRQVEVWF 147
H+ D G K +R T Q LE + + S ++Q L + N+ P+Q++VWF
Sbjct: 9 HNMDNG----KYVRYTPEQVEALERLYNDCPKPSSMRRQQLIRECPILSNIEPKQIKVWF 64
Query: 148 QNRRARSKLKQTEVECELLKR---CCEKL-KDENKRLQREVQEL 187
QNRR R K ++ + + R KL +EN RLQ++V L
Sbjct: 65 QNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSHL 108
>RGD|3367 [details] [associations]
symbol:Pou1f1 "POU class 1 homeobox 1" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IGI;IDA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive regulation
of transcription" evidence=IEA;ISO] [GO:0001102 "RNA polymerase II
activating transcription factor binding" evidence=IEA;ISO]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=IEA;ISO] [GO:0001708 "cell fate specification"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003682
"chromatin binding" evidence=IEA;ISO] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISO] [GO:0003714
"transcription corepressor activity" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005667 "transcription factor complex"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA;ISO] [GO:0008340
"determination of adult lifespan" evidence=IEA;ISO] [GO:0021983
"pituitary gland development" evidence=ISO] [GO:0021984
"adenohypophysis development" evidence=IMP] [GO:0030183 "B cell
differentiation" evidence=IEA;ISO] [GO:0032962 "positive regulation
of inositol trisphosphate biosynthetic process" evidence=IEA;ISO]
[GO:0040018 "positive regulation of multicellular organism growth"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0043567 "regulation of insulin-like growth
factor receptor signaling pathway" evidence=IEA;ISO] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IDA] [GO:0051169
"nuclear transport" evidence=IMP] [GO:0060126 "somatotropin secreting
cell differentiation" evidence=ISO] [GO:0060133 "somatotropin
secreting cell development" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR000327 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR010982 InterPro:IPR017970 Pfam:PF00046
Pfam:PF00157 PROSITE:PS00027 PROSITE:PS00035 PROSITE:PS00465
PROSITE:PS50071 PROSITE:PS51179 SMART:SM00352 SMART:SM00389 RGD:3367
GO:GO:0005634 GO:GO:0003714 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122
Gene3D:1.10.260.40 SUPFAM:SSF47413 GO:GO:0021984 InterPro:IPR013847
PRINTS:PR00028 GeneTree:ENSGT00700000104015 HOVERGEN:HBG053120
eggNOG:NOG241031 InterPro:IPR015586 PANTHER:PTHR11636:SF17
OMA:ATNVMST EMBL:X65364 EMBL:X65365 EMBL:X65367 EMBL:X65368
EMBL:L01506 EMBL:L01507 EMBL:S97398 EMBL:M23253 EMBL:X12658
EMBL:X63089 IPI:IPI00214925 IPI:IPI00231575 PIR:S22705
UniGene:Rn.10445 PDB:1AU7 PDBsum:1AU7 ProteinModelPortal:P10037
SMR:P10037 STRING:P10037 PhosphoSite:P10037
Ensembl:ENSRNOT00000000905 UCSC:RGD:3367 EvolutionaryTrace:P10037
Genevestigator:P10037 GermOnline:ENSRNOG00000000715 GO:GO:0051169
Uniprot:P10037
Length = 291
Score = 115 (45.5 bits), Expect = 0.00011, P = 0.00011
Identities = 32/86 (37%), Positives = 43/86 (50%)
Query: 92 HHEDEGGSPRKKLRLTKPQFAT---LEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQ 148
++E G + RK+ R T A LE F EHS S ++ +AE+LNL V VWF
Sbjct: 204 YNEKVGANERKRKRRTTISIAAKDALERHFGEHSKPSSQEIMRMAEELNLEKEVVRVWFC 263
Query: 149 NRRARSKLKQTEVECELLKRCCEKLK 174
NRR R K +T + L E L+
Sbjct: 264 NRRQREKRVKTSLNQSLFSISKEHLE 289
>UNIPROTKB|F1NDR6 [details] [associations]
symbol:SOHO-1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007368 "determination of left/right symmetry"
evidence=IEA] [GO:0031016 "pancreas development" evidence=IEA]
[GO:0032331 "negative regulation of chondrocyte differentiation"
evidence=IEA] [GO:0042474 "middle ear morphogenesis" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0048536 "spleen development" evidence=IEA]
[GO:0048645 "organ formation" evidence=IEA] [GO:0048705 "skeletal
system morphogenesis" evidence=IEA] [GO:0048706 "embryonic skeletal
system development" evidence=IEA] [GO:0060576 "intestinal
epithelial cell development" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104333 EMBL:AADN02014987
EMBL:AADN02014988 IPI:IPI00575662 Ensembl:ENSGALT00000025152
OMA:GRESGRC Uniprot:F1NDR6
Length = 259
Score = 114 (45.2 bits), Expect = 0.00011, P = 0.00011
Identities = 27/68 (39%), Positives = 37/68 (54%)
Query: 97 GGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKL 156
GG + + +K Q LE TF LS ++ GLA L+L QV++WFQNRR + K
Sbjct: 125 GGKKKTRTIFSKSQVFQLESTFDVKRYLSSAERAGLAAALHLTETQVKIWFQNRRNKLK- 183
Query: 157 KQTEVECE 164
+Q E E
Sbjct: 184 RQLSAEPE 191
>WB|WBGene00000452 [details] [associations]
symbol:ceh-31 species:6239 "Caenorhabditis elegans"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 eggNOG:NOG263484 EMBL:FO080757
GeneTree:ENSGT00700000104454 HOGENOM:HOG000020180 PIR:T25611
RefSeq:NP_508525.3 ProteinModelPortal:Q22910 SMR:Q22910
PaxDb:Q22910 EnsemblMetazoa:C33D12.1 GeneID:191621
KEGG:cel:CELE_C33D12.1 UCSC:C33D12.1 CTD:191621 WormBase:C33D12.1
InParanoid:Q22910 OMA:MELAHRM NextBio:949710 Uniprot:Q22910
Length = 260
Score = 114 (45.2 bits), Expect = 0.00011, P = 0.00011
Identities = 35/128 (27%), Positives = 60/128 (46%)
Query: 97 GGSPRKKLR--LTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARS 154
G +K R T Q LE+TF++ LS + + LA ++ L QV+ W+QNRR +
Sbjct: 90 GSKKARKARTIFTDKQLQELENTFEKQKYLSVQDRMELAHRMGLTDTQVKTWYQNRRTKW 149
Query: 155 KLKQTEVECELLK-----RCCEKLKDENKRLQREVQELKSM--KLSGAPLYMKLPAPTLT 207
K +Q V +LL ++L N + + SM + P++ L PT +
Sbjct: 150 K-RQASVGMDLLHDAGNMAAVQQLLRTNPYWANYLSQNTSMFGASNNRPVFNSLVVPTSS 208
Query: 208 VCPSCDEK 215
+ P+ + +
Sbjct: 209 MIPASNSQ 216
>ZFIN|ZDB-GENE-010108-1 [details] [associations]
symbol:vox "ventral homeobox" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IGI] [GO:0042661
"regulation of mesodermal cell fate specification" evidence=IGI]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-010108-1 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009953
GO:GO:0000976 GO:GO:0042661 EMBL:BC092695 IPI:IPI00629975
UniGene:Dr.82511 STRING:Q568V6 HOGENOM:HOG000170671
HOVERGEN:HBG098403 InParanoid:Q568V6 ArrayExpress:Q568V6
Uniprot:Q568V6
Length = 265
Score = 114 (45.2 bits), Expect = 0.00012, P = 0.00012
Identities = 26/80 (32%), Positives = 39/80 (48%)
Query: 89 IRDHH--EDEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVW 146
+ D H E +G + R + + T Q LE F +H L ++ A KL L Q+ W
Sbjct: 128 VEDGHDAEKDGATRRIRTKFTPEQIDKLEKIFNKHKYLDAGERVKTALKLGLSETQIRTW 187
Query: 147 FQNRRARSKLKQTEVECELL 166
FQNRR + K + E+ + L
Sbjct: 188 FQNRRMKLKREVQEMRADFL 207
>ZFIN|ZDB-GENE-050306-27 [details] [associations]
symbol:nkx3.3 "NK3 homeobox 3" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-050306-27 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104333
EMBL:CU929568 IPI:IPI00502006 Ensembl:ENSDART00000128951
Bgee:F1R3M6 Uniprot:F1R3M6
Length = 240
Score = 113 (44.8 bits), Expect = 0.00012, P = 0.00012
Identities = 34/108 (31%), Positives = 48/108 (44%)
Query: 101 RKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLKQTE 160
R + + Q LE F LS ++ LA L L QV++WFQNRR ++K +Q
Sbjct: 113 RSRAAFSHAQVYELERRFNLQRYLSGPERADLAGALKLTETQVKIWFQNRRYKTKRRQMA 172
Query: 161 VECE------LLKRCCEKLKDENKRLQREVQELKSMKLSGAPLYMKLP 202
E L KR K+ N + Q ++L S + PLY P
Sbjct: 173 AELATTPTTTLAKRVAVKVLVRNDQRQYNTEDLPSPSVP--PLYQSFP 218
>UNIPROTKB|F1NZL9 [details] [associations]
symbol:LOC100857765 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00660000095141 OMA:RRIRMRR
EMBL:AADN02056979 EMBL:AADN02056980 IPI:IPI00821562
Ensembl:ENSGALT00000038656 Uniprot:F1NZL9
Length = 78
Score = 96 (38.9 bits), Expect = 0.00012, P = 0.00012
Identities = 27/67 (40%), Positives = 37/67 (55%)
Query: 97 GGS----PRK-KLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRR 151
GGS PR+ + T Q LE+ F+ LS ++ LA L+L QV++WFQNRR
Sbjct: 8 GGSALXKPRRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRR 67
Query: 152 ARSKLKQ 158
+ K KQ
Sbjct: 68 TKWK-KQ 73
>UNIPROTKB|F1P4T4 [details] [associations]
symbol:HOXD13 "Homeobox protein Hox-D13" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00670000097683
IPI:IPI00598090 EMBL:AADN02020034 Ensembl:ENSGALT00000015092
OMA:CANDQTQ Uniprot:F1P4T4
Length = 111
Score = 96 (38.9 bits), Expect = 0.00012, P = 0.00012
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 101 RKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSK 155
+K++ TK Q LE+ + + ++ +++ ++ NL RQV +WFQNRR + K
Sbjct: 46 KKRVPYTKLQLKELENEYAINKFINKDKRRRISAATNLSERQVTIWFQNRRVKDK 100
>UNIPROTKB|P24340 [details] [associations]
symbol:HOXD9 "Homeobox protein Hox-D9" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231180 eggNOG:NOG288226
OrthoDB:EOG4SXNCJ IPI:IPI00814164 PIR:S14797 UniGene:Gga.12699
ProteinModelPortal:P24340 SMR:P24340 STRING:P24340
InParanoid:P24340 Uniprot:P24340
Length = 60
Score = 96 (38.9 bits), Expect = 0.00012, P = 0.00012
Identities = 22/55 (40%), Positives = 32/55 (58%)
Query: 101 RKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSK 155
+K+ TK Q LE F + L+ ++ +A LNL RQV++WFQNRR + K
Sbjct: 3 KKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARILNLTERQVKIWFQNRRMKMK 57
>UNIPROTKB|D6RBG8 [details] [associations]
symbol:PITX2 "Pituitary homeobox 2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231518 EMBL:AC017068 HGNC:HGNC:9005 ChiTaRS:PITX2
IPI:IPI00967695 ProteinModelPortal:D6RBG8 SMR:D6RBG8
Ensembl:ENST00000511990 ArrayExpress:D6RBG8 Bgee:D6RBG8
Uniprot:D6RBG8
Length = 118
Score = 96 (38.9 bits), Expect = 0.00012, P = 0.00012
Identities = 21/67 (31%), Positives = 35/67 (52%)
Query: 101 RKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLKQTE 160
R++ T Q LE TF+ + ++ +A NL +V VWF+NRRA+ + ++
Sbjct: 41 RQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERN 100
Query: 161 VECELLK 167
+ EL K
Sbjct: 101 QQAELCK 107
>UNIPROTKB|I3LF97 [details] [associations]
symbol:I3LF97 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060847
"endothelial cell fate specification" evidence=IEA] [GO:0060442
"branching involved in prostate gland morphogenesis" evidence=IEA]
[GO:0048844 "artery morphogenesis" evidence=IEA] [GO:0048839 "inner
ear development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045840 "positive regulation of mitosis" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0035115 "embryonic forelimb
morphogenesis" evidence=IEA] [GO:0030539 "male genitalia
development" evidence=IEA] [GO:0030510 "regulation of BMP signaling
pathway" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003281
"ventricular septum development" evidence=IEA] [GO:0001894 "tissue
homeostasis" evidence=IEA] [GO:0001886 "endothelial cell
morphogenesis" evidence=IEA] [GO:0001570 "vasculogenesis"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00670000097683 Ensembl:ENSSSCT00000022309
Uniprot:I3LF97
Length = 100
Score = 96 (38.9 bits), Expect = 0.00012, P = 0.00012
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 101 RKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSK 155
+K++ TK Q LE + + ++ +++ ++ NL RQV +WFQNRR + K
Sbjct: 36 KKRVPYTKVQLKELEREYATNKFITKDKRRRISATTNLSERQVTIWFQNRRVKEK 90
>UNIPROTKB|Q3LTE0 [details] [associations]
symbol:NANOG "Homeobox protein NANOG" species:9598 "Pan
troglodytes" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0003714
"transcription corepressor activity" evidence=ISS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0003714 GO:GO:0045893 GO:GO:0005654 GO:GO:0008406
GO:GO:0045931 GO:GO:0008284 GO:GO:0003700 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0032526 GO:GO:0009880 GO:GO:0001158 GO:GO:0019827
GO:GO:0030514 GO:GO:0017145 GO:GO:0001710 eggNOG:NOG297592
HOGENOM:HOG000236291 HOVERGEN:HBG058783 OrthoDB:EOG40VVQM CTD:79923
GeneTree:ENSGT00670000098076 KO:K10164 OMA:TWTNPTW GO:GO:0010454
EMBL:DQ179631 RefSeq:NP_001065295.1 UniGene:Ptr.6337
ProteinModelPortal:Q3LTE0 SMR:Q3LTE0 STRING:Q3LTE0
Ensembl:ENSPTRT00000008541 GeneID:748301 KEGG:ptr:748301
InParanoid:Q3LTE0 NextBio:20915034 Uniprot:Q3LTE0
Length = 305
Score = 115 (45.5 bits), Expect = 0.00012, P = 0.00012
Identities = 36/142 (25%), Positives = 61/142 (42%)
Query: 16 ALPQSDDHDHQKKNGKKLILKDDQLLPSLTLGRRSENTLKSATKEKESTDVLQQAXXXXX 75
+LP + D ++ + +I ++ PSL + ++ + S D+L Q
Sbjct: 10 SLPCFEASDCKESSPMPVICGPEENYPSLQMSSAEMPHTETVSPLPSSMDLLIQDSPDSS 69
Query: 76 XXXXXXXXXXXKGIRDHHEDEGGSPRKKLR--LTKPQFATLEDTFKEHSTLSPKQKQGLA 133
+ ED+ ++K R + Q L D F+ LS +Q Q L+
Sbjct: 70 TSPKGKQPTSAENSVTKKEDKVPVKKQKTRTVFSSTQLCVLNDRFQRQKYLSLQQMQELS 129
Query: 134 EKLNLRPRQVEVWFQNRRARSK 155
LNL +QV+ WFQN+R +SK
Sbjct: 130 NILNLSYKQVKTWFQNQRMKSK 151
>RGD|1305369 [details] [associations]
symbol:Nkx3-1 "NK3 homeobox 1" species:10116 "Rattus norvegicus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=ISO;ISS] [GO:0000983 "RNA polymerase II core
promoter sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO] [GO:0000988 "protein binding
transcription factor activity" evidence=ISO;ISS] [GO:0001047 "core
promoter binding" evidence=ISO;ISS] [GO:0001656 "metanephros
development" evidence=IEA] [GO:0001756 "somitogenesis"
evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISO;ISS] [GO:0003677 "DNA binding"
evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;ISS] [GO:0004882
"androgen receptor activity" evidence=ISO;ISS] [GO:0005622
"intracellular" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process"
evidence=ISO;ISS] [GO:0007431 "salivary gland development"
evidence=ISO;ISS] [GO:0007507 "heart development" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA;ISO]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISO;ISS] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO;ISS] [GO:0008584 "male gonad
development" evidence=IEA] [GO:0008656 "cysteine-type endopeptidase
activator activity involved in apoptotic process" evidence=IEA;ISO]
[GO:0010628 "positive regulation of gene expression"
evidence=ISO;ISS] [GO:0010629 "negative regulation of gene
expression" evidence=ISO] [GO:0010942 "positive regulation of cell
death" evidence=ISO;ISS] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISO;ISS]
[GO:0030284 "estrogen receptor activity" evidence=ISO;ISS]
[GO:0030295 "protein kinase activator activity" evidence=ISO;ISS]
[GO:0030331 "estrogen receptor binding" evidence=ISO;ISS]
[GO:0030521 "androgen receptor signaling pathway" evidence=ISO;ISS]
[GO:0033574 "response to testosterone stimulus" evidence=ISO;ISS]
[GO:0035690 "cellular response to drug" evidence=IEA;ISO]
[GO:0035907 "dorsal aorta development" evidence=IEA] [GO:0042826
"histone deacetylase binding" evidence=IEA;ISO] [GO:0043280
"positive regulation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISO;ISS] [GO:0043491
"protein kinase B signaling cascade" evidence=ISO;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=ISO] [GO:0043569 "negative
regulation of insulin-like growth factor receptor signaling
pathway" evidence=ISO;ISS] [GO:0043621 "protein self-association"
evidence=ISO;ISS] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0045860 "positive regulation of protein
kinase activity" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO;ISS] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=ISO;ISS] [GO:0045930 "negative regulation of mitotic cell
cycle" evidence=IEA;ISO] [GO:0045931 "positive regulation of
mitotic cell cycle" evidence=ISO;ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;ISS] [GO:0048754 "branching morphogenesis of an
epithelial tube" evidence=ISO;ISS] [GO:0050680 "negative regulation
of epithelial cell proliferation" evidence=ISO;ISS] [GO:0051781
"positive regulation of cell division" evidence=ISO;ISS]
[GO:0060037 "pharyngeal system development" evidence=IEA]
[GO:0060442 "branching involved in prostate gland morphogenesis"
evidence=ISO;ISS] [GO:0060664 "epithelial cell proliferation
involved in salivary gland morphogenesis" evidence=ISO;ISS]
[GO:0060770 "negative regulation of epithelial cell proliferation
involved in prostate gland development" evidence=ISO;ISS]
[GO:0071347 "cellular response to interleukin-1" evidence=IEA;ISO]
[GO:0071356 "cellular response to tumor necrosis factor"
evidence=IEA;ISO] [GO:0071383 "cellular response to steroid hormone
stimulus" evidence=ISO;ISS] [GO:0071456 "cellular response to
hypoxia" evidence=IEA;ISO] [GO:0071850 "mitotic cell cycle arrest"
evidence=IEA;ISO] [GO:0071899 "negative regulation of estrogen
receptor binding" evidence=ISO;ISS] [GO:0097162 "MADS box domain
binding" evidence=IEA;ISO] [GO:2000836 "positive regulation of
androgen secretion" evidence=ISO;ISS] [GO:2001022 "positive
regulation of response to DNA damage stimulus" evidence=ISO;ISS]
[GO:2001235 "positive regulation of apoptotic signaling pathway"
evidence=ISO] [GO:2001244 "positive regulation of intrinsic
apoptotic signaling pathway" evidence=ISO;ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:1305369 GO:GO:0005634
GO:GO:0045892 GO:GO:0007507 GO:GO:0045931 GO:GO:0008284
GO:GO:0051781 GO:GO:0045944 GO:GO:0071456 GO:GO:0014068
GO:GO:0030295 GO:GO:0043621 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0008584 GO:GO:0001756
GO:GO:0006919 GO:GO:0035690 GO:GO:0010942 GO:GO:0060037
GO:GO:0033574 GO:GO:0001047 GO:GO:0008656 GO:GO:0043491
GO:GO:0000976 GO:GO:0004882 GO:GO:0071347 GO:GO:0071356
GO:GO:0030331 GO:GO:0000983 GO:GO:0060770 GO:GO:0001656
GO:GO:2001244 GO:GO:0043569 GO:GO:0048754
GeneTree:ENSGT00700000104206 GO:GO:0045930 GO:GO:2001022
GO:GO:0060442 GO:GO:0071850 GO:GO:0000988 GO:GO:0030284
GO:GO:0060664 EMBL:CH473951 HOGENOM:HOG000231923 HOVERGEN:HBG006689
KO:K09348 GO:GO:0071899 CTD:4824 eggNOG:NOG238786 OMA:TEPERHL
OrthoDB:EOG46Q6TS GO:GO:0035907 GO:GO:2000836 EMBL:BC100628
IPI:IPI00373298 RefSeq:NP_001029316.1 UniGene:Rn.43468 SMR:Q497B7
STRING:Q497B7 Ensembl:ENSRNOT00000020753 GeneID:305999
KEGG:rno:305999 UCSC:RGD:1305369 InParanoid:Q497B7 NextBio:655374
Genevestigator:Q497B7 Uniprot:Q497B7
Length = 238
Score = 105 (42.0 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 24/71 (33%), Positives = 39/71 (54%)
Query: 100 PRKKLR--LTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLK 157
P+K+ R + Q LE F LS ++ LA+ L L QV++WFQNRR ++K +
Sbjct: 125 PQKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKRR 184
Query: 158 QTEVECELLKR 168
Q + +L++
Sbjct: 185 QLSEDLGVLEK 195
Score = 41 (19.5 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 89 IRDHHEDEGGSP 100
+RDH E GG P
Sbjct: 39 LRDHAERRGGQP 50
>UNIPROTKB|F1NNC8 [details] [associations]
symbol:TLX1 "T-cell leukemia homeobox protein 1"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007417 "central nervous system development"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0045165 "cell fate commitment" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0048536 "spleen
development" evidence=IEA] [GO:0048645 "organ formation"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0008284 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0045165
GeneTree:ENSGT00700000104454 IPI:IPI00573767 EMBL:AADN02030793
Ensembl:ENSGALT00000012707 OMA:XLISELE ArrayExpress:F1NNC8
Uniprot:F1NNC8
Length = 141
Score = 101 (40.6 bits), Expect = 0.00014, P = 0.00014
Identities = 29/102 (28%), Positives = 47/102 (46%)
Query: 93 HEDEGGSPRKKLR----LTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQ 148
H + +P KK + T+ Q LE F L+ ++ LA+ L + QV+ WFQ
Sbjct: 2 HPYQNRTPPKKKKPRTSFTRLQICELEKRFHRQKYLASAERAALAKALKMTDAQVKTWFQ 61
Query: 149 NRRA---RSKLKQTEVECELLKRCCEKLKDE--NKRLQREVQ 185
NRR R ++ E E + R +L+ E K + + +Q
Sbjct: 62 NRRTKWRRQTAEEREAERQQANRILMQLQQEAFQKTINQPIQ 103
>RGD|1308911 [details] [associations]
symbol:Meox1 "mesenchyme homeobox 1" species:10116 "Rattus
norvegicus" [GO:0001757 "somite specification" evidence=IEA;ISO]
[GO:0003682 "chromatin binding" evidence=IEA;ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0071837 "HMG box
domain binding" evidence=IEA;ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:1308911 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:CH473948
GeneTree:ENSGT00660000095141 CTD:4222 KO:K09322 OMA:QPPAPVW
OrthoDB:EOG46DM3J IPI:IPI00203787 RefSeq:NP_001102307.1
UniGene:Rn.149759 Ensembl:ENSRNOT00000028220 GeneID:363684
KEGG:rno:363684 UCSC:RGD:1308911 NextBio:683991 Uniprot:D4A532
Length = 253
Score = 113 (44.8 bits), Expect = 0.00014, P = 0.00014
Identities = 27/62 (43%), Positives = 36/62 (58%)
Query: 96 EGGSPRKKLR--LTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRAR 153
EG S +K R TK Q LE F H+ L+ ++ +A L+L RQV+VWFQNRR +
Sbjct: 165 EGSSKARKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQVKVWFQNRRMK 224
Query: 154 SK 155
K
Sbjct: 225 WK 226
>WB|WBGene00003024 [details] [associations]
symbol:lin-39 species:6239 "Caenorhabditis elegans"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0018991 "oviposition" evidence=IMP] [GO:0040026
"positive regulation of vulval development" evidence=IGI;IMP]
[GO:0040027 "negative regulation of vulval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0016477
"cell migration" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IMP] [GO:0040025 "vulval development" evidence=IEP]
[GO:0042659 "regulation of cell fate specification" evidence=IMP]
[GO:0051302 "regulation of cell division" evidence=IMP] [GO:0045026
"plasma membrane fusion" evidence=IMP] [GO:0007265 "Ras protein
signal transduction" evidence=IEP] [GO:0009952 "anterior/posterior
pattern specification" evidence=IMP] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0018991 GO:GO:0007411 GO:GO:0007265 GO:GO:0016477
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09311
GO:GO:0040025 GO:GO:0040027 GO:GO:0040026 GO:GO:0042659
GO:GO:0051302 EMBL:FO080423 GeneTree:ENSGT00700000104189
GO:GO:0045026 eggNOG:NOG236516 EMBL:L19639 EMBL:L19248 PIR:B40722
RefSeq:NP_001021164.1 UniGene:Cel.19645 ProteinModelPortal:P34684
SMR:P34684 IntAct:P34684 MINT:MINT-114843 STRING:P34684
EnsemblMetazoa:C07H6.7.1 EnsemblMetazoa:C07H6.7.2 GeneID:176068
KEGG:cel:CELE_C07H6.7 UCSC:C07H6.7.2 CTD:176068 WormBase:C07H6.7
HOGENOM:HOG000113332 InParanoid:P34684 OMA:KEFHTHK NextBio:890972
Uniprot:P34684
Length = 253
Score = 113 (44.8 bits), Expect = 0.00014, P = 0.00014
Identities = 26/66 (39%), Positives = 36/66 (54%)
Query: 93 HEDEGGS---PRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQN 149
H GGS R++ T+ Q LE F H L+ K++ +A L L RQV++WFQN
Sbjct: 156 HSTTGGSRGEKRQRTAYTRNQVLELEKEFHTHKYLTRKRRIEVAHSLMLTERQVKIWFQN 215
Query: 150 RRARSK 155
RR + K
Sbjct: 216 RRMKHK 221
>UNIPROTKB|J9P235 [details] [associations]
symbol:J9P235 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AAEX03000742
GeneTree:ENSGT00640000091698 Ensembl:ENSCAFT00000044561
Uniprot:J9P235
Length = 167
Score = 107 (42.7 bits), Expect = 0.00014, P = 0.00014
Identities = 23/61 (37%), Positives = 36/61 (59%)
Query: 99 SPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRAR-SKLK 157
S RK+ T+ Q A LE F ++ +P ++ +A KL + P ++VWF+N RA+ K K
Sbjct: 7 SQRKRTMFTEKQLADLECLFSKNPYPNPSLQREMASKLEIHPTVLQVWFKNHRAKLKKAK 66
Query: 158 Q 158
Q
Sbjct: 67 Q 67
>MGI|MGI:97588 [details] [associations]
symbol:Pou1f1 "POU domain, class 1, transcription factor 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IDA]
[GO:0001102 "RNA polymerase II activating transcription factor
binding" evidence=ISO] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=ISO] [GO:0001708 "cell fate
specification" evidence=IDA] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISO;IDA] [GO:0003714 "transcription corepressor
activity" evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667 "transcription
factor complex" evidence=IC;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0008284 "positive
regulation of cell proliferation" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0021983
"pituitary gland development" evidence=IMP] [GO:0021984
"adenohypophysis development" evidence=ISO] [GO:0030183 "B cell
differentiation" evidence=IMP] [GO:0032962 "positive regulation of
inositol trisphosphate biosynthetic process" evidence=IMP]
[GO:0040018 "positive regulation of multicellular organism growth"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0043567 "regulation of insulin-like growth factor
receptor signaling pathway" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO;IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IGI;IDA] [GO:0051169 "nuclear
transport" evidence=ISO] [GO:0060126 "somatotropin secreting cell
differentiation" evidence=IMP] [GO:0060133 "somatotropin secreting
cell development" evidence=IMP] InterPro:IPR000327
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR010982
InterPro:IPR017970 Pfam:PF00046 Pfam:PF00157 PROSITE:PS00027
PROSITE:PS00035 PROSITE:PS00465 PROSITE:PS50071 PROSITE:PS51179
SMART:SM00352 SMART:SM00389 MGI:MGI:97588 GO:GO:0001708
GO:GO:0008340 GO:GO:0008284 GO:GO:0043565 GO:GO:0040018
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0001077 GO:GO:0030183 Gene3D:1.10.260.40 SUPFAM:SSF47413
InterPro:IPR013847 PRINTS:PR00028 GO:GO:0060133 GO:GO:0043567
GO:GO:0032962 GeneTree:ENSGT00700000104015 HOVERGEN:HBG053120
CTD:5449 eggNOG:NOG241031 HOGENOM:HOG000116302 KO:K09363
OrthoDB:EOG4JQ3Z4 InterPro:IPR015586 PANTHER:PTHR11636:SF17
EMBL:D12885 EMBL:X57512 EMBL:BC061213 IPI:IPI00117165
IPI:IPI00515322 IPI:IPI00515372 PIR:S11663 RefSeq:NP_032875.1
UniGene:Mm.355440 ProteinModelPortal:Q00286 SMR:Q00286
STRING:Q00286 PhosphoSite:Q00286 PRIDE:Q00286
Ensembl:ENSMUST00000176330 GeneID:18736 KEGG:mmu:18736
UCSC:uc007zqi.1 NextBio:294867 Bgee:Q00286 Genevestigator:Q00286
GermOnline:ENSMUSG00000004842 Uniprot:Q00286
Length = 291
Score = 114 (45.2 bits), Expect = 0.00015, P = 0.00015
Identities = 32/86 (37%), Positives = 43/86 (50%)
Query: 92 HHEDEGGSPRKKLRLTKPQFAT---LEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQ 148
++E G + RK+ R T A LE F EHS S ++ +AE+LNL V VWF
Sbjct: 204 YNEKVGANERKRKRRTTISVAAKDALERHFGEHSKPSSQEIMRMAEELNLEKEVVRVWFC 263
Query: 149 NRRARSKLKQTEVECELLKRCCEKLK 174
NRR R K +T + L E L+
Sbjct: 264 NRRQREKRVKTSLNQSLFSISKEHLE 289
>UNIPROTKB|Q6XYB7 [details] [associations]
symbol:LBX2 "Transcription factor LBX2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 EMBL:CH471053
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 HSSP:P13297 HOGENOM:HOG000007247 HOVERGEN:HBG006244
KO:K09353 EMBL:AY305861 EMBL:AY203953 EMBL:BC150517 IPI:IPI00376237
IPI:IPI00550811 RefSeq:NP_001009812.1 UniGene:Hs.722114
ProteinModelPortal:Q6XYB7 SMR:Q6XYB7 IntAct:Q6XYB7
PhosphoSite:Q6XYB7 DMDM:74749508 PaxDb:Q6XYB7 PRIDE:Q6XYB7
DNASU:85474 Ensembl:ENST00000377566 Ensembl:ENST00000460508
GeneID:85474 KEGG:hsa:85474 UCSC:uc002slv.4 UCSC:uc002slw.3
CTD:85474 GeneCards:GC02M074724 HGNC:HGNC:15525 HPA:HPA044257
MIM:607164 neXtProt:NX_Q6XYB7 PharmGKB:PA30305 eggNOG:NOG235470
InParanoid:Q6XYB7 OMA:MVPRAPS GenomeRNAi:85474 NextBio:76128
ArrayExpress:Q6XYB7 Bgee:Q6XYB7 CleanEx:HS_LBX2
Genevestigator:Q6XYB7 Uniprot:Q6XYB7
Length = 198
Score = 110 (43.8 bits), Expect = 0.00015, P = 0.00015
Identities = 27/70 (38%), Positives = 36/70 (51%)
Query: 98 GSPRKKLR--LTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSK 155
G R+K R T Q LE F L+P ++ GLA +L L QV WFQNRRA+ K
Sbjct: 82 GRKRRKSRTAFTAQQVLELERRFVFQKYLAPSERDGLATRLGLANAQVVTWFQNRRAKLK 141
Query: 156 LKQTEVECEL 165
E+ ++
Sbjct: 142 RDVEEMRADV 151
>FB|FBgn0030408 [details] [associations]
symbol:CG11085 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:AE014298 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104206 EMBL:BT022201
RefSeq:NP_572815.3 UniGene:Dm.22767 SMR:Q9VYL0
EnsemblMetazoa:FBtr0073656 GeneID:32213 KEGG:dme:Dmel_CG11085
UCSC:CG11085-RA FlyBase:FBgn0030408 eggNOG:NOG276476
InParanoid:Q9VYL0 OMA:ESSVESC GenomeRNAi:32213 NextBio:777424
Uniprot:Q9VYL0
Length = 295
Score = 114 (45.2 bits), Expect = 0.00015, P = 0.00015
Identities = 29/80 (36%), Positives = 41/80 (51%)
Query: 97 GGSPRKK-LRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSK 155
G PR++ T Q A LE F+ LS + +AE LNL QV+ W+QNRR + K
Sbjct: 157 GRKPRRRRTAFTHAQLAYLERKFRCQKYLSVADRSDVAETLNLSETQVKTWYQNRRTKWK 216
Query: 156 LKQTEVECELLKRCCEKLKD 175
+Q ++ E L+ KD
Sbjct: 217 -RQNQLRLEQLRHQATMEKD 235
>ZFIN|ZDB-GENE-001020-1 [details] [associations]
symbol:hmx3 "homeo box (H6 family) 3" species:7955
"Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0042472 "inner ear morphogenesis" evidence=IGI] [GO:0048916
"posterior lateral line development" evidence=IGI] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-001020-1 GO:GO:0005634 GO:GO:0007399
GO:GO:0030154 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0042472 GO:GO:0048916 HSSP:P13297 HOGENOM:HOG000231923
KO:K09349 CTD:340784 eggNOG:NOG312519 HOVERGEN:HBG098273
OrthoDB:EOG4T1HN9 EMBL:AF288211 EMBL:EU050651 EMBL:BC095015
IPI:IPI00859820 RefSeq:NP_571709.1 UniGene:Dr.82517
ProteinModelPortal:Q504H8 STRING:Q504H8 GeneID:60310 KEGG:dre:60310
InParanoid:Q9DFB1 NextBio:20892417 ArrayExpress:Q504H8
Uniprot:Q504H8
Length = 297
Score = 114 (45.2 bits), Expect = 0.00015, P = 0.00015
Identities = 43/150 (28%), Positives = 63/150 (42%)
Query: 23 HDHQKKNGKKLILKDDQLLPSLTLGRRS-ENTLKSATKEKESTDVLQQAXXXXXXXXXXX 81
H H+ + +K +D P+ R S E LKS K+ D +
Sbjct: 90 HLHRTEAAQKA--RDSS--PTTGTDRDSPELVLKSDPDAKDDEDDNKSGDEIVLEEGDTE 145
Query: 82 XXXXXKGIRDHHEDEGGSPRKKLR-------LTKPQFATLEDTFKEHSTLSPKQKQGLAE 134
GI D + + G+ +K R ++ Q LE TF LS ++ GLA
Sbjct: 146 DGKKEGGIDDWKKSDDGADKKPCRKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAA 205
Query: 135 KLNLRPRQVEVWFQNRRARSKLKQTEVECE 164
L+L QV++WFQNRR + K +Q E E
Sbjct: 206 SLHLTETQVKIWFQNRRNKWK-RQLAAELE 234
>UNIPROTKB|Q9H2C1 [details] [associations]
symbol:LHX5 "LIM/homeobox protein Lhx5" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0021527 "spinal cord association neuron
differentiation" evidence=IEA] [GO:0021702 "cerebellar Purkinje
cell differentiation" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021846 "cell proliferation in
forebrain" evidence=IEA] [GO:0021879 "forebrain neuron
differentiation" evidence=IEA] [GO:0021937 "cerebellar Purkinje
cell-granule cell precursor cell signaling involved in regulation
of granule cell precursor cell proliferation" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0021766 GO:GO:0045893 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0021846
GO:GO:0021879 GO:GO:0021527 GO:GO:0021702 eggNOG:NOG257130
HOGENOM:HOG000231630 HOVERGEN:HBG006263 KO:K09372 OrthoDB:EOG405S1F
GO:GO:0021937 CTD:64211 OMA:SHQGQEM EMBL:AF291181 EMBL:BC109230
IPI:IPI00022760 RefSeq:NP_071758.1 UniGene:Hs.302029
ProteinModelPortal:Q9H2C1 SMR:Q9H2C1 STRING:Q9H2C1
PhosphoSite:Q9H2C1 DMDM:18202938 PRIDE:Q9H2C1
Ensembl:ENST00000261731 GeneID:64211 KEGG:hsa:64211 UCSC:uc001tvj.1
GeneCards:GC12M113900 HGNC:HGNC:14216 MIM:605992 neXtProt:NX_Q9H2C1
PharmGKB:PA30367 InParanoid:Q9H2C1 PhylomeDB:Q9H2C1
GenomeRNAi:64211 NextBio:66119 Bgee:Q9H2C1 CleanEx:HS_LHX5
Genevestigator:Q9H2C1 GermOnline:ENSG00000089116 Uniprot:Q9H2C1
Length = 402
Score = 116 (45.9 bits), Expect = 0.00015, P = 0.00015
Identities = 40/133 (30%), Positives = 64/133 (48%)
Query: 32 KLILKDDQLLPSLTLGRRSENTLKSATKEKESTDVLQQAXXXXXXXXXXXXXXXXKGIRD 91
K + KDD L S +L S N++ S T S D LQ A + +
Sbjct: 112 KFVCKDDYLSSS-SLKEGSLNSVSSCTDRSLSPD-LQDALQDDPKETDNSTSSDKETANN 169
Query: 92 HHEDEG-GSPRKKLRLT--KPQFATLEDTFKEHSTLSPKQ--KQGLAEKLNLRPRQVEVW 146
+E++ G+ R+ R T Q TL+ F +T P + ++ LA++ L R ++VW
Sbjct: 170 ENEEQNSGTKRRGPRTTIKAKQLETLKAAFA--ATPKPTRHIREQLAQETGLNMRVIQVW 227
Query: 147 FQNRRARSK-LKQ 158
FQNRR++ + +KQ
Sbjct: 228 FQNRRSKERRMKQ 240
>UNIPROTKB|B0W1V2 [details] [associations]
symbol:abd-A "Homeobox protein abdominal-A homolog"
species:7176 "Culex quinquefasciatus" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0009952 "anterior/posterior
pattern specification" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 eggNOG:NOG328968
OrthoDB:EOG4F7M1W Gene3D:1.10.10.60 InterPro:IPR022132
InterPro:IPR020479 Pfam:PF12407 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:DS231824 RefSeq:XP_001842686.1 ProteinModelPortal:B0W1V2
SMR:B0W1V2 EnsemblMetazoa:CPIJ001016-RA GeneID:6032019
KEGG:cqu:CpipJ_CPIJ001016 VectorBase:CPIJ001016 OMA:CHGIASP
PhylomeDB:B0W1V2 Uniprot:B0W1V2
Length = 216
Score = 111 (44.1 bits), Expect = 0.00016, P = 0.00016
Identities = 33/100 (33%), Positives = 56/100 (56%)
Query: 98 GSPRKKLRLTKPQFATLE--DTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSK 155
G PR++ R T +F TLE F + L+ +++ +A L L RQ+++WFQNRR K
Sbjct: 40 GCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRM--K 97
Query: 156 LKQTEVECELLKRCCEKLKDENKRLQREVQELKSMKLSGA 195
LK+ EL R +++ ++ +R + E ++K+ L A
Sbjct: 98 LKK-----EL--RAVKEINEQARREREEQDKMKNDSLKSA 130
>UNIPROTKB|E2RL78 [details] [associations]
symbol:HMX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
OMA:GRAESAW GeneTree:ENSGT00700000104333 EMBL:AAEX03002426
Ensembl:ENSCAFT00000023183 Uniprot:E2RL78
Length = 345
Score = 115 (45.5 bits), Expect = 0.00016, P = 0.00016
Identities = 29/70 (41%), Positives = 38/70 (54%)
Query: 97 GGSPRKKLR--LTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARS 154
GG +KK R ++ Q LE TF LS ++ GLA L L QV++WFQNRR +
Sbjct: 195 GGGRKKKTRTVFSRSQVFQLESTFDLKRYLSSAERAGLAASLQLTETQVKIWFQNRRNKW 254
Query: 155 KLKQTEVECE 164
K +Q E E
Sbjct: 255 K-RQLAAELE 263
>UNIPROTKB|Q9NP08 [details] [associations]
symbol:HMX1 "Homeobox protein HMX1" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IMP] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0045892 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HSSP:P13297 CTD:3166 eggNOG:NOG241326
HOVERGEN:HBG031610 KO:K09349 EMBL:M99587 EMBL:AC116612
IPI:IPI00004379 PIR:A47234 RefSeq:NP_061815.2 UniGene:Hs.104134
ProteinModelPortal:Q9NP08 SMR:Q9NP08 STRING:Q9NP08
PhosphoSite:Q9NP08 DMDM:259016250 PaxDb:Q9NP08 PRIDE:Q9NP08
DNASU:3166 Ensembl:ENST00000400677 GeneID:3166 KEGG:hsa:3166
UCSC:uc003izz.1 GeneCards:GC04M008847 H-InvDB:HIX0031931
HGNC:HGNC:5017 MIM:142992 MIM:612109 neXtProt:NX_Q9NP08
Orphanet:157962 PharmGKB:PA29344 HOGENOM:HOG000171379
InParanoid:Q9NP08 OMA:GRAESAW GenomeRNAi:3166 NextBio:12554
ArrayExpress:Q9NP08 Bgee:Q9NP08 CleanEx:HS_HMX1
Genevestigator:Q9NP08 Uniprot:Q9NP08
Length = 348
Score = 115 (45.5 bits), Expect = 0.00016, P = 0.00016
Identities = 29/70 (41%), Positives = 38/70 (54%)
Query: 97 GGSPRKKLR--LTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARS 154
GG +KK R ++ Q LE TF LS ++ GLA L L QV++WFQNRR +
Sbjct: 199 GGGRKKKTRTVFSRSQVFQLESTFDLKRYLSSAERAGLAASLQLTETQVKIWFQNRRNKW 258
Query: 155 KLKQTEVECE 164
K +Q E E
Sbjct: 259 K-RQLAAELE 267
>RGD|1595784 [details] [associations]
symbol:Hoxc9 "homeobox C9" species:10116 "Rattus norvegicus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA;ISO] [GO:0048706 "embryonic skeletal
system development" evidence=ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1595784 GO:GO:0007275
GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
eggNOG:NOG314669 EMBL:S76301 EMBL:M37568 IPI:IPI01016344 PIR:D43559
UniGene:Rn.91646 ProteinModelPortal:P18866 SMR:P18866 STRING:P18866
UCSC:RGD:1595784 HOVERGEN:HBG107057 Genevestigator:P18866
Uniprot:P18866
Length = 108
Score = 95 (38.5 bits), Expect = 0.00016, P = 0.00016
Identities = 30/94 (31%), Positives = 52/94 (55%)
Query: 101 RKKLRLTKPQFATLE--DTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLKQ 158
R+ R T ++ TLE F + L+ K++ ++ L L RQV++WFQNRR + K K+
Sbjct: 15 RRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KE 73
Query: 159 TEVECELLKRCCEKLKDE-NKRLQREVQELKSMK 191
+ R EK+++E N+ ++E +E + K
Sbjct: 74 NNKDKLPGARDEEKVEEEGNEEEEKEEEEKEENK 107
>UNIPROTKB|P18866 [details] [associations]
symbol:Hoxc8 "Homeobox protein Hox-C8" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
RGD:1595784 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 eggNOG:NOG314669 EMBL:S76301 EMBL:M37568
IPI:IPI01016344 PIR:D43559 UniGene:Rn.91646
ProteinModelPortal:P18866 SMR:P18866 STRING:P18866 UCSC:RGD:1595784
HOVERGEN:HBG107057 Genevestigator:P18866 Uniprot:P18866
Length = 108
Score = 95 (38.5 bits), Expect = 0.00016, P = 0.00016
Identities = 30/94 (31%), Positives = 52/94 (55%)
Query: 101 RKKLRLTKPQFATLE--DTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLKQ 158
R+ R T ++ TLE F + L+ K++ ++ L L RQV++WFQNRR + K K+
Sbjct: 15 RRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KE 73
Query: 159 TEVECELLKRCCEKLKDE-NKRLQREVQELKSMK 191
+ R EK+++E N+ ++E +E + K
Sbjct: 74 NNKDKLPGARDEEKVEEEGNEEEEKEEEEKEENK 107
>UNIPROTKB|Q6NSW7 [details] [associations]
symbol:NANOGP8 "Putative homeobox protein NANOGP8"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 HOVERGEN:HBG058783
HPA:CAB019380 EMBL:BC069807 EMBL:BC098275 EMBL:BC099704
IPI:IPI00552676 ProteinModelPortal:Q6NSW7 SMR:Q6NSW7 STRING:Q6NSW7
DMDM:74762336 PRIDE:Q6NSW7 GeneCards:GC15M035375 HGNC:HGNC:23106
neXtProt:NX_Q6NSW7 InParanoid:Q6NSW7 ArrayExpress:Q6NSW7
Genevestigator:Q6NSW7 GermOnline:ENSG00000179437 Uniprot:Q6NSW7
Length = 305
Score = 114 (45.2 bits), Expect = 0.00016, P = 0.00016
Identities = 36/142 (25%), Positives = 61/142 (42%)
Query: 16 ALPQSDDHDHQKKNGKKLILKDDQLLPSLTLGRRSENTLKSATKEKESTDVLQQAXXXXX 75
+LP + D ++ + +I ++ PSL + ++ + S D+L Q
Sbjct: 10 SLPCFEASDCKESSPMPVICGPEENYPSLQMSSAEMPHTETVSPLPSSMDLLIQDSPDSS 69
Query: 76 XXXXXXXXXXXKGIRDHHEDEGGSPRKKLR--LTKPQFATLEDTFKEHSTLSPKQKQGLA 133
+ ED+ ++K R + Q L D F+ LS +Q Q L+
Sbjct: 70 TSPKGKQPTSAENSVAKKEDKVPVKKQKTRTVFSSTQLCVLNDRFQRQKYLSLQQMQELS 129
Query: 134 EKLNLRPRQVEVWFQNRRARSK 155
LNL +QV+ WFQN+R +SK
Sbjct: 130 NILNLSYKQVKTWFQNQRMKSK 151
>UNIPROTKB|Q9H9S0 [details] [associations]
symbol:NANOG "Homeobox protein NANOG" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0010468 "regulation of gene expression" evidence=IMP]
[GO:0035019 "somatic stem cell maintenance" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISS] [GO:0001714 "endodermal cell
fate specification" evidence=IDA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IC;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0009790 "embryo development" evidence=IEP] [GO:0030154 "cell
differentiation" evidence=IEP] [GO:0045595 "regulation of cell
differentiation" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0003714 GO:GO:0005730 GO:GO:0003677
GO:GO:0008283 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:CH471116
GO:GO:0035019 GO:GO:0001714 UniGene:Hs.635882 eggNOG:NOG297592
HOGENOM:HOG000236291 HOVERGEN:HBG058783 OrthoDB:EOG40VVQM CTD:79923
KO:K10164 OMA:TWTNPTW EMBL:AB093576 EMBL:AY230262 EMBL:AY578089
EMBL:AK022643 IPI:IPI00434539 IPI:IPI00807368 RefSeq:NP_079141.2
PDB:2KT0 PDBsum:2KT0 ProteinModelPortal:Q9H9S0 SMR:Q9H9S0
STRING:Q9H9S0 PhosphoSite:Q9H9S0 DMDM:118573073 PRIDE:Q9H9S0
DNASU:79923 Ensembl:ENST00000229307 Ensembl:ENST00000526286
GeneID:79923 KEGG:hsa:79923 UCSC:uc009zfy.1 GeneCards:GC12P007940
H-InvDB:HIX0010400 H-InvDB:HIX0038147 HGNC:HGNC:20857 HPA:CAB019380
MIM:607937 neXtProt:NX_Q9H9S0 PharmGKB:PA134864904
InParanoid:Q9H9S0 PhylomeDB:Q9H9S0 EvolutionaryTrace:Q9H9S0
GenomeRNAi:79923 NextBio:69830 ArrayExpress:Q9H9S0 Bgee:Q9H9S0
CleanEx:HS_NANOG Genevestigator:Q9H9S0 GermOnline:ENSG00000111704
Uniprot:Q9H9S0
Length = 305
Score = 114 (45.2 bits), Expect = 0.00016, P = 0.00016
Identities = 37/143 (25%), Positives = 63/143 (44%)
Query: 16 ALPQSDDHDHQKKNGKKLILKDDQLLPSLTLGRRSENTLKSATKEKESTDVL-QQAXXXX 74
+LP + D ++ + +I ++ PSL + ++ + S D+L Q +
Sbjct: 10 SLPCFEASDCKESSPMPVICGPEENYPSLQMSSAEMPHTETVSPLPSSMDLLIQDSPDSS 69
Query: 75 XXXXXXXXXXXXKGIRDHHEDEGGSPRKKLR--LTKPQFATLEDTFKEHSTLSPKQKQGL 132
K + ED+ ++K R + Q L D F+ LS +Q Q L
Sbjct: 70 TSPKGKQPTSAEKSVAKK-EDKVPVKKQKTRTVFSSTQLCVLNDRFQRQKYLSLQQMQEL 128
Query: 133 AEKLNLRPRQVEVWFQNRRARSK 155
+ LNL +QV+ WFQN+R +SK
Sbjct: 129 SNILNLSYKQVKTWFQNQRMKSK 151
>UNIPROTKB|H0YN05 [details] [associations]
symbol:CERS3 "Ceramide synthase 3" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0030148 "sphingolipid biosynthetic
process" evidence=IEA] [GO:0050291 "sphingosine N-acyltransferase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0030148 EMBL:AC015723
GO:GO:0050291 EMBL:AC027020 HGNC:HGNC:23752 Ensembl:ENST00000558884
Bgee:H0YN05 Uniprot:H0YN05
Length = 162
Score = 106 (42.4 bits), Expect = 0.00016, P = 0.00016
Identities = 29/68 (42%), Positives = 40/68 (58%)
Query: 101 RKKLRLTKPQFATLEDTFKEHSTLSPKQKQ--GLAEKLNLRPRQVEVWFQNRRAR---SK 155
++ +R P LE+ FK HST P Q GLA+K NL RQVE WF++RR + S+
Sbjct: 71 KETVRKVTPN-TVLENFFK-HSTRQPLQTDIYGLAKKCNLTERQVERWFRSRRNQERPSR 128
Query: 156 LKQTEVEC 163
LK+ + C
Sbjct: 129 LKKFQEAC 136
>UNIPROTKB|Q9YI38 [details] [associations]
symbol:GGMOXr1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0001757 "somite specification" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0071837 "HMG box domain binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HSSP:P02833
GeneTree:ENSGT00660000095141 CTD:4222 eggNOG:NOG282563
HOGENOM:HOG000230987 HOVERGEN:HBG052456 KO:K09322 OMA:QPPAPVW
OrthoDB:EOG46DM3J EMBL:AADN02070145 EMBL:AF043432 IPI:IPI00581083
RefSeq:NP_990096.1 UniGene:Gga.288 SMR:Q9YI38
Ensembl:ENSGALT00000001806 GeneID:395533 KEGG:gga:395533
InParanoid:Q9YI38 NextBio:20815610 Uniprot:Q9YI38
Length = 240
Score = 112 (44.5 bits), Expect = 0.00016, P = 0.00016
Identities = 27/62 (43%), Positives = 36/62 (58%)
Query: 96 EGGSPRKKLR--LTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRAR 153
EG S +K R TK Q LE F H+ L+ ++ +A L+L RQV+VWFQNRR +
Sbjct: 152 EGSSRSRKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMK 211
Query: 154 SK 155
K
Sbjct: 212 WK 213
>UNIPROTKB|Q9H2Z4 [details] [associations]
symbol:NKX2-4 "Homeobox protein Nkx-2.4" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 EMBL:CH471133 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 eggNOG:NOG328614
HOGENOM:HOG000231923 HOVERGEN:HBG006689 EMBL:AL158013 EMBL:AF202037
IPI:IPI00830084 RefSeq:NP_149416.1 UniGene:Hs.456662
ProteinModelPortal:Q9H2Z4 SMR:Q9H2Z4 STRING:Q9H2Z4 DMDM:206729913
PRIDE:Q9H2Z4 Ensembl:ENST00000351817 GeneID:644524 KEGG:hsa:644524
UCSC:uc010gcz.3 CTD:644524 GeneCards:GC20M021371 HGNC:HGNC:7837
MIM:607808 neXtProt:NX_Q9H2Z4 PharmGKB:PA31644 InParanoid:Q9H2Z4
KO:K09344 OMA:FSHSAMG PhylomeDB:Q9H2Z4 GenomeRNAi:644524
NextBio:116331 Bgee:Q9H2Z4 CleanEx:HS_NKX2-4 Genevestigator:Q9H2Z4
Uniprot:Q9H2Z4
Length = 354
Score = 115 (45.5 bits), Expect = 0.00017, P = 0.00017
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 92 HHEDEGGSPRKKLRL--TKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQN 149
H +PR+K R+ ++ Q LE FK+ LS +++ LA ++L P QV++WFQN
Sbjct: 180 HAAAAAAAPRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQN 239
Query: 150 RRARSKLKQTEVECELLKR 168
R + K + + + L++
Sbjct: 240 HRYKMKRQAKDKAAQQLQQ 258
>UNIPROTKB|E9PT14 [details] [associations]
symbol:Nanog "Protein Nanog" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1303178 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 IPI:IPI00882426
Ensembl:ENSRNOT00000011051 Uniprot:E9PT14
Length = 310
Score = 114 (45.2 bits), Expect = 0.00017, P = 0.00017
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 99 SPRKKLR--LTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSK 155
SPR+K+R ++ Q L+D F+ LS +Q Q L+ LNL +QV+ WFQN+R + K
Sbjct: 95 SPRQKMRTVFSQAQLCALKDRFQRQRYLSLQQMQDLSTILNLSYKQVKTWFQNQRMKCK 153
>MGI|MGI:97348 [details] [associations]
symbol:Nkx2-3 "NK2 transcription factor related, locus 3
(Drosophila)" species:10090 "Mus musculus" [GO:0001776 "leukocyte
homeostasis" evidence=IMP] [GO:0002317 "plasma cell
differentiation" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006641 "triglyceride metabolic
process" evidence=IMP] [GO:0006955 "immune response" evidence=IMP]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009791 "post-embryonic development" evidence=IMP] [GO:0022612
"gland morphogenesis" evidence=IMP] [GO:0030183 "B cell
differentiation" evidence=IMP] [GO:0030225 "macrophage
differentiation" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IMP] [GO:0043367 "CD4-positive,
alpha-beta T cell differentiation" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP;IDA] [GO:0048535 "lymph node development"
evidence=IMP] [GO:0048536 "spleen development" evidence=IMP]
[GO:0048537 "mucosal-associated lymphoid tissue development"
evidence=IMP] [GO:0048541 "Peyer's patch development" evidence=IMP]
[GO:0048565 "digestive tract development" evidence=IMP] [GO:0048621
"post-embryonic digestive tract morphogenesis" evidence=IMP]
[GO:0050900 "leukocyte migration" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:97348 GO:GO:0005634
GO:GO:0050900 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0006641 GO:GO:0048536
GO:GO:0048541 GO:GO:0042475 GO:GO:0001776 GO:GO:0022612
GO:GO:0030225 GO:GO:0048535 eggNOG:NOG310976
GeneTree:ENSGT00700000104098 HOGENOM:HOG000231923
HOVERGEN:HBG006689 GO:GO:0002317 CTD:159296 KO:K09343 OMA:YGCAYPA
OrthoDB:EOG4WM4WF GO:GO:0043367 GO:GO:0048621 EMBL:Y11117
EMBL:AF202036 EMBL:AF155583 EMBL:BC072614 IPI:IPI00124004
RefSeq:NP_032725.1 UniGene:Mm.56994 ProteinModelPortal:P97334
SMR:P97334 STRING:P97334 PhosphoSite:P97334 PRIDE:P97334
Ensembl:ENSMUST00000057178 GeneID:18089 KEGG:mmu:18089
UCSC:uc008hok.1 InParanoid:P97334 ChiTaRS:NKX2-3 NextBio:293231
Bgee:P97334 Genevestigator:P97334 GermOnline:ENSMUSG00000044220
Uniprot:P97334
Length = 362
Score = 115 (45.5 bits), Expect = 0.00017, P = 0.00017
Identities = 32/111 (28%), Positives = 51/111 (45%)
Query: 56 SATKEKESTDVLQQAXXXXXXXXXXXXXXXXKGIRDHHEDEGGSPRK-KLRLTKPQFATL 114
S KE+E V +++ K D + S RK ++ ++ Q L
Sbjct: 101 SGPKEQEEEVVSERSQKSCQLKKSLEAAGDCKTSEDGERPKPRSRRKPRVLFSQAQVFEL 160
Query: 115 EDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLKQTEVECEL 165
E FK+ LS +++ LA L L QV++WFQNRR + K ++ + EL
Sbjct: 161 ERRFKQQRYLSAPEREHLASSLKLTSTQVKIWFQNRRYKCKRQRQDKSLEL 211
>UNIPROTKB|Q58CR9 [details] [associations]
symbol:MEOX1 "Mesenchyme homeo box 1 isoform 1"
species:9913 "Bos taurus" [GO:0071837 "HMG box domain binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001757 "somite
specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS50071 SMART:SM00389 GO:GO:0005730
GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0001757 GeneTree:ENSGT00660000095141 HOGENOM:HOG000230987
HOVERGEN:HBG052456 EMBL:DAAA02049232 UniGene:Bt.65876 EMBL:BT021878
IPI:IPI00904405 SMR:Q58CR9 Ensembl:ENSBTAT00000020913
InParanoid:Q58CR9 Uniprot:Q58CR9
Length = 223
Score = 111 (44.1 bits), Expect = 0.00017, P = 0.00017
Identities = 37/138 (26%), Positives = 54/138 (39%)
Query: 16 ALPQSDDHDHQKKNGKKLILKDDQLLPSLTLGRRSENTLKSATKEKESTDVLQQAXXXXX 75
A PQ D ++ L + S +G S + + E +VL
Sbjct: 87 AFPQPPDWHFPVSEARRR-LNPGPVGGSKEIGANSPGLVDTTGGPGEDYEVLGSTANETE 145
Query: 76 XXXXXXXXXXXKGIRDHHEDEGGSPRKKLR--LTKPQFATLEDTFKEHSTLSPKQKQGLA 133
+ + EG S +K R TK Q LE F H+ L+ ++ +A
Sbjct: 146 KKSTRRKKENSDNQENRAKPEGASKARKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIA 205
Query: 134 EKLNLRPRQVEVWFQNRR 151
L+L RQV+VWFQNRR
Sbjct: 206 VNLDLSERQVKVWFQNRR 223
>UNIPROTKB|F1MKX5 [details] [associations]
symbol:NKX2-4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104098 EMBL:DAAA02035816 EMBL:DAAA02035817
IPI:IPI00696816 Ensembl:ENSBTAT00000015024 OMA:CQNGAAT
Uniprot:F1MKX5
Length = 278
Score = 113 (44.8 bits), Expect = 0.00017, P = 0.00017
Identities = 24/72 (33%), Positives = 43/72 (59%)
Query: 99 SPRKKLRL--TKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKL 156
+PR+K R+ ++ Q LE FK+ LS +++ LA ++L P QV++WFQN R + K
Sbjct: 115 APRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKR 174
Query: 157 KQTEVECELLKR 168
+ + + L++
Sbjct: 175 QAKDKAAQQLQQ 186
>RGD|1308443 [details] [associations]
symbol:Nkx2-2 "NK2 homeobox 2" species:10116 "Rattus norvegicus"
[GO:0001159 "core promoter proximal region DNA binding"
evidence=ISO] [GO:0003323 "type B pancreatic cell development"
evidence=ISO] [GO:0003326 "pancreatic A cell fate commitment"
evidence=ISO] [GO:0003327 "type B pancreatic cell fate commitment"
evidence=ISO] [GO:0003329 "pancreatic PP cell fate commitment"
evidence=ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISO] [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005622 "intracellular" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0007224 "smoothened
signaling pathway" evidence=ISO] [GO:0007399 "nervous system
development" evidence=ISO] [GO:0008134 "transcription factor
binding" evidence=ISO] [GO:0009749 "response to glucose stimulus"
evidence=IEP] [GO:0014003 "oligodendrocyte development"
evidence=ISO] [GO:0014070 "response to organic cyclic compound"
evidence=IEP] [GO:0021522 "spinal cord motor neuron
differentiation" evidence=ISO] [GO:0021529 "spinal cord
oligodendrocyte cell differentiation" evidence=ISO] [GO:0021530
"spinal cord oligodendrocyte cell fate specification" evidence=ISO]
[GO:0021554 "optic nerve development" evidence=IEP] [GO:0030154
"cell differentiation" evidence=ISO] [GO:0031018 "endocrine
pancreas development" evidence=ISO] [GO:0032570 "response to
progesterone stimulus" evidence=IEP] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA;ISO] [GO:0045595 "regulation of cell
differentiation" evidence=ISO] [GO:0045597 "positive regulation of
cell differentiation" evidence=ISO] [GO:0045665 "negative
regulation of neuron differentiation" evidence=ISO] [GO:0045666
"positive regulation of neuron differentiation" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0048468 "cell
development" evidence=ISO] [GO:0048565 "digestive tract
development" evidence=ISO] [GO:0048665 "neuron fate specification"
evidence=ISO] [GO:0048708 "astrocyte differentiation" evidence=ISO]
[GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=ISO] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0060580 "ventral spinal cord interneuron fate
determination" evidence=ISO] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1308443 GO:GO:0005634 GO:GO:0009749 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0032570 GO:GO:0021554 OrthoDB:EOG4Z36FJ
IPI:IPI00952221 Ensembl:ENSRNOT00000066457 UCSC:RGD:1308443
ArrayExpress:D3ZR25 Uniprot:D3ZR25
Length = 248
Score = 112 (44.5 bits), Expect = 0.00018, P = 0.00018
Identities = 24/73 (32%), Positives = 40/73 (54%)
Query: 95 DEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARS 154
D G ++++ +K Q LE F++ LS +++ LA + L P QV++WFQN R +
Sbjct: 124 DAGKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKM 183
Query: 155 KLKQTEVECELLK 167
K + E E L+
Sbjct: 184 KRARAEKGMEDLR 196
>ZFIN|ZDB-GENE-080204-54 [details] [associations]
symbol:hmx1 "H6 homeo box 1" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0043010 "camera-type
eye development" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-080204-54 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0043010
GeneTree:ENSGT00700000104333 EMBL:AL929576 EMBL:EU203551
IPI:IPI00884721 UniGene:Dr.45660 Ensembl:ENSDART00000113087
HOVERGEN:HBG101086 Uniprot:B2KTE5
Length = 282
Score = 113 (44.8 bits), Expect = 0.00018, P = 0.00018
Identities = 30/72 (41%), Positives = 39/72 (54%)
Query: 96 EGGSPRKKLRLT---KPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRA 152
E GS RKK T + Q LE TF LS ++ GLA L+L QV++WFQNRR
Sbjct: 144 EPGSARKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQVKIWFQNRRN 203
Query: 153 RSKLKQTEVECE 164
+ K +Q + E
Sbjct: 204 KWK-RQLAADLE 214
>UNIPROTKB|J9P1P5 [details] [associations]
symbol:LBX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104206 OMA:MVPRAPS EMBL:AAEX03010965
Ensembl:ENSCAFT00000042884 Uniprot:J9P1P5
Length = 192
Score = 109 (43.4 bits), Expect = 0.00018, P = 0.00018
Identities = 27/70 (38%), Positives = 36/70 (51%)
Query: 98 GSPRKKLR--LTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSK 155
G R+K R T Q LE F L+P ++ GLA +L L QV WFQNRRA+ K
Sbjct: 82 GRRRRKSRTAFTAQQVLELERRFLFQKYLAPSERDGLAARLGLANAQVVTWFQNRRAKLK 141
Query: 156 LKQTEVECEL 165
E+ ++
Sbjct: 142 RDVEEMRADV 151
>FB|FBgn0038852 [details] [associations]
symbol:CG7056 species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=ISS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 EMBL:AE014297 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048813
GeneTree:ENSGT00680000099625 RefSeq:NP_650938.2 UniGene:Dm.27358
ProteinModelPortal:Q9VDF0 SMR:Q9VDF0 DIP:DIP-18460N IntAct:Q9VDF0
MINT:MINT-281000 EnsemblMetazoa:FBtr0084037 GeneID:42495
KEGG:dme:Dmel_CG7056 UCSC:CG7056-RA FlyBase:FBgn0038852
InParanoid:Q9VDF0 OMA:QIRFTSQ OrthoDB:EOG4RBP28 PhylomeDB:Q9VDF0
GenomeRNAi:42495 NextBio:829091 ArrayExpress:Q9VDF0 Bgee:Q9VDF0
Uniprot:Q9VDF0
Length = 323
Score = 114 (45.2 bits), Expect = 0.00018, P = 0.00018
Identities = 26/58 (44%), Positives = 35/58 (60%)
Query: 98 GSPRK--KLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRAR 153
G RK ++R T Q LE F LSP++++ LA +L L RQV+ WFQNRRA+
Sbjct: 191 GVKRKGGQIRFTSQQTKNLEARFASSKYLSPEERRHLALQLKLTDRQVKTWFQNRRAK 248
>UNIPROTKB|Q9W769 [details] [associations]
symbol:vex1 "Homeobox protein vex1" species:8355 "Xenopus
laevis" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0030509 "BMP signaling
pathway" evidence=IGI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0048264
"determination of ventral identity" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0030509 GO:GO:0048264 HSSP:P02836 EMBL:AF149307
RefSeq:NP_001081954.1 UniGene:Xl.558 ProteinModelPortal:Q9W769
GeneID:398140 KEGG:xla:398140 CTD:398140 Xenbase:XB-GENE-864941
HOVERGEN:HBG094147 Uniprot:Q9W769
Length = 285
Score = 113 (44.8 bits), Expect = 0.00018, P = 0.00018
Identities = 23/66 (34%), Positives = 39/66 (59%)
Query: 95 DEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARS 154
DE + R + + + Q LE +FKE+ + +K+ L++ L L Q++ WFQNRR +
Sbjct: 127 DEDAAARARTKFSPEQLEELERSFKENRYIGSSEKRRLSKVLKLSETQIKTWFQNRRMKF 186
Query: 155 KLKQTE 160
K +QT+
Sbjct: 187 K-RQTQ 191
>UNIPROTKB|F1N8D2 [details] [associations]
symbol:HESX1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 IPI:IPI00575485 GeneTree:ENSGT00700000104128
EMBL:AADN02014018 Ensembl:ENSGALT00000008836
Ensembl:ENSGALT00000036259 Uniprot:F1N8D2
Length = 193
Score = 109 (43.4 bits), Expect = 0.00018, P = 0.00018
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 101 RKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLKQTE 160
R + T+ Q LE+ FK +S ++ LA KL+L ++++WFQNRRA KLK++
Sbjct: 118 RPRTAFTRNQIEVLENVFKMNSYPGIDIREELARKLDLEEDRIQIWFQNRRA--KLKRSH 175
Query: 161 VECELL 166
E + L
Sbjct: 176 RESQFL 181
>MGI|MGI:97351 [details] [associations]
symbol:Nkx2-6 "NK2 transcription factor related, locus 6
(Drosophila)" species:10090 "Mus musculus" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=ISO] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007507 "heart development"
evidence=IGI] [GO:0008284 "positive regulation of cell
proliferation" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IGI] [GO:0035050 "embryonic heart tube development"
evidence=ISO] [GO:0043066 "negative regulation of apoptotic
process" evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0060037 "pharyngeal system development"
evidence=IGI] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:97351 GO:GO:0005634 GO:GO:0043066
GO:GO:0008284 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0060037 GO:GO:0048565 GO:GO:0055015 GO:GO:0021854
GO:GO:0060039 GO:GO:0035050 GO:GO:0043586 GO:GO:0055014
GeneTree:ENSGT00700000104098 HOGENOM:HOG000231923
HOVERGEN:HBG006689 OrthoDB:EOG4WM4WF CTD:137814 eggNOG:NOG301183
KO:K09346 EMBL:AF045150 IPI:IPI00122998 RefSeq:NP_035050.2
UniGene:Mm.390691 ProteinModelPortal:P43688 SMR:P43688
STRING:P43688 PhosphoSite:P43688 PRIDE:P43688
Ensembl:ENSMUST00000062437 GeneID:18092 KEGG:mmu:18092
InParanoid:P43688 OMA:WETVLEM NextBio:293239 Bgee:P43688
Genevestigator:P43688 Uniprot:P43688
Length = 289
Score = 113 (44.8 bits), Expect = 0.00019, P = 0.00019
Identities = 25/68 (36%), Positives = 41/68 (60%)
Query: 100 PRKKLRL--TKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLK 157
P++K R+ ++ Q LE FK+ L+ +++ LA L L QV++WFQNRR +SK +
Sbjct: 122 PQRKSRVLFSQAQVLALERRFKQQRYLTAPEREHLASALQLTSTQVKIWFQNRRYKSKSQ 181
Query: 158 QTEVECEL 165
+ + EL
Sbjct: 182 RQDQTLEL 189
>ZFIN|ZDB-GENE-980526-26 [details] [associations]
symbol:msxb "muscle segment homeobox B" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0031101 "fin regeneration" evidence=IMP]
[GO:0043049 "otic placode formation" evidence=IGI] [GO:0009953
"dorsal/ventral pattern formation" evidence=IDA] [GO:0048703
"embryonic viscerocranium morphogenesis" evidence=IGI] [GO:0043523
"regulation of neuron apoptotic process" evidence=IGI] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980526-26 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0009953 GO:GO:0043523 GO:GO:0031101 GO:GO:0043049
GO:GO:0048703 GeneTree:ENSGT00700000104129 eggNOG:NOG298790
HOGENOM:HOG000231922 HOVERGEN:HBG005205 EMBL:BC095311 EMBL:AY472118
EMBL:U16311 EMBL:M38579 IPI:IPI00495289 PIR:PS0407
RefSeq:NP_571335.1 UniGene:Dr.75069 ProteinModelPortal:Q03356
SMR:Q03356 STRING:Q03356 Ensembl:ENSDART00000008468 GeneID:30511
KEGG:dre:30511 CTD:30511 InParanoid:Q03356 NextBio:20806899
ArrayExpress:Q03356 Bgee:Q03356 Uniprot:Q03356
Length = 257
Score = 112 (44.5 bits), Expect = 0.00020, P = 0.00019
Identities = 26/63 (41%), Positives = 36/63 (57%)
Query: 110 QFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLKQTEVECELLKRC 169
Q +LE F++ LS ++ + LNL QV++WFQNRRA++K Q E E E K C
Sbjct: 150 QLLSLERKFRQKQYLSIAERAEFSNSLNLTETQVKIWFQNRRAKAKRLQ-EAELEKFK-C 207
Query: 170 CEK 172
K
Sbjct: 208 ASK 210
>UNIPROTKB|P79775 [details] [associations]
symbol:P79775 "Homeobox protein ANF-1" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:U65436 IPI:IPI00575485
RefSeq:NP_990343.1 UniGene:Gga.32344 ProteinModelPortal:P79775
STRING:P79775 GeneID:395864 KEGG:gga:395864 CTD:8820
eggNOG:NOG326168 HOGENOM:HOG000112889 HOVERGEN:HBG004226 KO:K09354
NextBio:20815931 Uniprot:P79775
Length = 196
Score = 109 (43.4 bits), Expect = 0.00020, P = 0.00020
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 101 RKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLKQTE 160
R + T+ Q LE+ FK +S ++ LA KL+L ++++WFQNRRA KLK++
Sbjct: 121 RPRTAFTRNQIEVLENVFKMNSYPGIDIREELARKLDLEEDRIQIWFQNRRA--KLKRSH 178
Query: 161 VECELL 166
E + L
Sbjct: 179 RESQFL 184
>UNIPROTKB|F1SNT2 [details] [associations]
symbol:LBX2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104206 KO:K09353 OMA:MVPRAPS EMBL:CU468647
RefSeq:XP_003125045.1 Ensembl:ENSSSCT00000009066 GeneID:100514830
KEGG:ssc:100514830 Uniprot:F1SNT2
Length = 196
Score = 109 (43.4 bits), Expect = 0.00020, P = 0.00020
Identities = 27/70 (38%), Positives = 36/70 (51%)
Query: 98 GSPRKKLR--LTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSK 155
G R+K R T Q LE F L+P ++ GLA +L L QV WFQNRRA+ K
Sbjct: 82 GRRRRKSRTAFTAQQVLELERRFVFQKYLAPSERDGLAARLGLANAQVVTWFQNRRAKLK 141
Query: 156 LKQTEVECEL 165
E+ ++
Sbjct: 142 RDVEEMRADV 151
>ZFIN|ZDB-GENE-081104-238 [details] [associations]
symbol:nkx3-1 "NK3 homeobox 1" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-081104-238 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104206 EMBL:BX004845 IPI:IPI00890379
Ensembl:ENSDART00000146056 Bgee:F6NGH9 Uniprot:F6NGH9
Length = 214
Score = 110 (43.8 bits), Expect = 0.00020, P = 0.00020
Identities = 26/68 (38%), Positives = 36/68 (52%)
Query: 97 GGSPRKKLR--LTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARS 154
GG +K+ R T Q LE F LS ++ LA L+L QV++WFQNRR ++
Sbjct: 94 GGGKKKRSRAAFTHLQVLELEKKFSRQRYLSAPERTHLASALHLTETQVKIWFQNRRYKT 153
Query: 155 KLKQTEVE 162
K +Q E
Sbjct: 154 KRRQLTTE 161
>UNIPROTKB|F1MPM0 [details] [associations]
symbol:HESX1 "Homeobox 1" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0048853 "forebrain
morphogenesis" evidence=IEA] [GO:0047485 "protein N-terminus
binding" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043584 "nose
development" evidence=IEA] [GO:0030916 "otic vesicle formation"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045892 GO:GO:0043565
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
CTD:8820 KO:K09354 GO:GO:0030916 GO:GO:0043584
GeneTree:ENSGT00700000104128 GO:GO:0048853 OMA:PWADTCS
EMBL:DAAA02054314 EMBL:JQ711178 IPI:IPI00710649
RefSeq:NP_001178069.1 UniGene:Bt.32880 Ensembl:ENSBTAT00000001886
GeneID:781811 KEGG:bta:781811 NextBio:20925056 Uniprot:F1MPM0
Length = 185
Score = 108 (43.1 bits), Expect = 0.00020, P = 0.00020
Identities = 24/66 (36%), Positives = 39/66 (59%)
Query: 101 RKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLKQTE 160
R + T+ Q LE+ F+ + ++ LA+KLNL ++++WFQNRRA KLK++
Sbjct: 110 RPRTAFTQNQIEVLENVFRVNCYPGIDIREDLAQKLNLEEDRIQIWFQNRRA--KLKRSH 167
Query: 161 VECELL 166
E + L
Sbjct: 168 RESQFL 173
>UNIPROTKB|Q9UBX0 [details] [associations]
symbol:HESX1 "Homeobox expressed in ES cells 1"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0030916 "otic vesicle formation" evidence=IEA]
[GO:0043584 "nose development" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0048853
"forebrain morphogenesis" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003677 "DNA binding" evidence=TAS] [GO:0007420
"brain development" evidence=TAS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0045892
GO:GO:0007420 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
CTD:8820 eggNOG:NOG326168 HOGENOM:HOG000112889 HOVERGEN:HBG004226
KO:K09354 GO:GO:0030916 GO:GO:0043584 GO:GO:0048853 Orphanet:95494
EMBL:AF059734 EMBL:U82811 EMBL:U65437 EMBL:BC069515 EMBL:BC093979
EMBL:BC112089 IPI:IPI00002815 RefSeq:NP_003856.1 UniGene:Hs.171980
PDB:2K40 PDBsum:2K40 ProteinModelPortal:Q9UBX0 SMR:Q9UBX0
STRING:Q9UBX0 DMDM:12230168 PRIDE:Q9UBX0 DNASU:8820
Ensembl:ENST00000295934 GeneID:8820 KEGG:hsa:8820 UCSC:uc003din.4
GeneCards:GC03M057207 HGNC:HGNC:4877 HPA:HPA024187 MIM:182230
MIM:262600 MIM:601802 neXtProt:NX_Q9UBX0 Orphanet:226307
Orphanet:95496 Orphanet:3157 PharmGKB:PA29255 InParanoid:Q9UBX0
OMA:PWADTCS OrthoDB:EOG46T32J PhylomeDB:Q9UBX0 ChiTaRS:HESX1
EvolutionaryTrace:Q9UBX0 GenomeRNAi:8820 NextBio:33086
ArrayExpress:Q9UBX0 Bgee:Q9UBX0 CleanEx:HS_HESX1
Genevestigator:Q9UBX0 GermOnline:ENSG00000163666 Uniprot:Q9UBX0
Length = 185
Score = 108 (43.1 bits), Expect = 0.00020, P = 0.00020
Identities = 24/66 (36%), Positives = 39/66 (59%)
Query: 101 RKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLKQTE 160
R + T+ Q LE+ F+ + ++ LA+KLNL ++++WFQNRRA KLK++
Sbjct: 110 RPRTAFTQNQIEVLENVFRVNCYPGIDIREDLAQKLNLEEDRIQIWFQNRRA--KLKRSH 167
Query: 161 VECELL 166
E + L
Sbjct: 168 RESQFL 173
>WB|WBGene00000434 [details] [associations]
symbol:ceh-9 species:6239 "Caenorhabditis elegans"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00700000104206 EMBL:FO081483
EMBL:X52811 PIR:S13129 RefSeq:NP_001021797.1 UniGene:Cel.30778
ProteinModelPortal:P56407 SMR:P56407 EnsemblMetazoa:Y65B4BR.9
GeneID:267057 KEGG:cel:CELE_Y65B4BR.9 UCSC:Y65B4BR.9 CTD:267057
WormBase:Y65B4BR.9 eggNOG:NOG237842 InParanoid:P56407 OMA:FSGKQVF
NextBio:953494 Uniprot:P56407
Length = 147
Score = 102 (41.0 bits), Expect = 0.00021, P = 0.00021
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 101 RKKLRLT--KPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLKQ 158
RKK R T Q LE F+ LS + LA++L++ QV++WFQNRR + K +
Sbjct: 70 RKKARTTFSGKQVFELEKQFEAKKYLSSSDRSELAKRLDVTETQVKIWFQNRRTKWKKIE 129
Query: 159 TEVE 162
+E E
Sbjct: 130 SEKE 133
>FB|FBgn0004863 [details] [associations]
symbol:C15 "C15" species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0007501 "mesodermal cell fate specification"
evidence=NAS] [GO:0035015 "elongation of arista core" evidence=IMP]
[GO:0045747 "positive regulation of Notch signaling pathway"
evidence=IEP] [GO:0035218 "leg disc development" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0007480 "imaginal disc-derived leg morphogenesis"
evidence=IMP] [GO:0048800 "antennal morphogenesis" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IPI]
[GO:0022416 "chaeta development" evidence=IMP] [GO:0043234 "protein
complex" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 EMBL:AE014297 GO:GO:0005634
GO:GO:0045892 GO:GO:0045893 GO:GO:0043234 GO:GO:0043565
GO:GO:0003700 GO:GO:0045747 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0007501 GO:GO:0022416
GO:GO:0035015 GO:GO:0007480 GeneTree:ENSGT00700000104454
HSSP:P14653 KO:K15607 FlyBase:FBgn0004863 EMBL:BT025203
RefSeq:NP_476873.2 UniGene:Dm.2657 SMR:Q7KS72 STRING:Q7KS72
EnsemblMetazoa:FBtr0084111 GeneID:42544 KEGG:dme:Dmel_CG7937
UCSC:CG7937-RA CTD:42544 InParanoid:Q7KS72 OMA:SHEEDEH
GenomeRNAi:42544 NextBio:829343 Uniprot:Q7KS72
Length = 339
Score = 105 (42.0 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 29/85 (34%), Positives = 44/85 (51%)
Query: 93 HEDEGGSP--RKKLR--LTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQ 148
H + +P RKK R T+ Q A LE F + L+ ++ LA L + QV+ WFQ
Sbjct: 207 HPYQNRTPPKRKKPRTSFTRIQVAELEKRFHKQKYLASAERAALARGLKMTDAQVKTWFQ 266
Query: 149 NRRARSKLKQTEVECELLKRCCEKL 173
NRR + + +QT E E ++ +L
Sbjct: 267 NRRTKWR-RQTAEEREAERQAANRL 290
Score = 45 (20.9 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 5/15 (33%), Positives = 13/15 (86%)
Query: 19 QSDDHDHQKKNGKKL 33
+ DDH+H+ ++G+++
Sbjct: 5 EEDDHEHENEHGEEV 19
>UNIPROTKB|F1N8D1 [details] [associations]
symbol:HESX1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0008022 "protein
C-terminus binding" evidence=IEA] [GO:0030916 "otic vesicle
formation" evidence=IEA] [GO:0043584 "nose development"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0047485 "protein N-terminus
binding" evidence=IEA] [GO:0048853 "forebrain morphogenesis"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045892 GO:GO:0043565
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00700000104128 OMA:PWADTCS EMBL:AADN02014018
IPI:IPI00820422 Ensembl:ENSGALT00000036260 ArrayExpress:F1N8D1
Uniprot:F1N8D1
Length = 199
Score = 109 (43.4 bits), Expect = 0.00021, P = 0.00021
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 101 RKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLKQTE 160
R + T+ Q LE+ FK +S ++ LA KL+L ++++WFQNRRA KLK++
Sbjct: 124 RPRTAFTRNQIEVLENVFKMNSYPGIDIREELARKLDLEEDRIQIWFQNRRA--KLKRSH 181
Query: 161 VECELL 166
E + L
Sbjct: 182 RESQFL 187
>UNIPROTKB|P29552 [details] [associations]
symbol:abd-A "Homeobox protein abdominal-A homolog"
species:7159 "Aedes aegypti" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 EMBL:CH477608 EMBL:X67132
RefSeq:XP_001660313.1 ProteinModelPortal:P29552 SMR:P29552
EnsemblMetazoa:AAEL009742-RA GeneID:5572355
KEGG:aag:AaeL_AAEL009742 VectorBase:AAEL009742 eggNOG:NOG328968
InParanoid:P29552 OrthoDB:EOG4F7M1W PhylomeDB:P29552
Gene3D:1.10.10.60 InterPro:IPR022132 InterPro:IPR020479
Pfam:PF12407 PRINTS:PR00024 SUPFAM:SSF46689 Uniprot:P29552
Length = 239
Score = 111 (44.1 bits), Expect = 0.00021, P = 0.00021
Identities = 33/100 (33%), Positives = 56/100 (56%)
Query: 98 GSPRKKLRLTKPQFATLE--DTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSK 155
G PR++ R T +F TLE F + L+ +++ +A L L RQ+++WFQNRR K
Sbjct: 18 GCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRM--K 75
Query: 156 LKQTEVECELLKRCCEKLKDENKRLQREVQELKSMKLSGA 195
LK+ EL R +++ ++ +R + E ++K+ L A
Sbjct: 76 LKK-----EL--RAVKEINEQARREREEQDKMKNDSLKSA 108
>WB|WBGene00000439 [details] [associations]
symbol:ceh-16 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0009957 "epidermal cell fate specification" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0045026 "plasma membrane fusion" evidence=IGI;IMP] [GO:0048859
"formation of anatomical boundary" evidence=IMP] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009792
GO:GO:0043565 GO:GO:0045944 GO:GO:0040011 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0040015 GO:GO:0000976 GO:GO:0010172
GO:GO:0009957 GO:GO:0048859 GeneTree:ENSGT00680000099870
EMBL:AY647457 EMBL:FO080380 PIR:S44752 PIR:T15488
RefSeq:NP_498898.2 UniGene:Cel.25260 ProteinModelPortal:P34326
SMR:P34326 STRING:P34326 EnsemblMetazoa:C13G5.1.1
EnsemblMetazoa:C13G5.1.2 GeneID:191618 KEGG:cel:CELE_C13G5.1
UCSC:C13G5.1 CTD:191618 WormBase:C13G5.1 eggNOG:NOG306728
HOGENOM:HOG000022417 InParanoid:P34326 OMA:PTFASPN NextBio:949698
GO:GO:0045026 PROSITE:PS00033 Uniprot:P34326
Length = 187
Score = 108 (43.1 bits), Expect = 0.00021, P = 0.00021
Identities = 22/61 (36%), Positives = 35/61 (57%)
Query: 101 RKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLKQTE 160
R + T Q L+ F+E L+ K++Q LA +L L Q+++WFQN+RA+ K +
Sbjct: 89 RPRTAFTGDQLDRLKTEFRESRYLTEKRRQELAHELGLNESQIKIWFQNKRAKLKKSTSS 148
Query: 161 V 161
V
Sbjct: 149 V 149
>UNIPROTKB|F1NVB2 [details] [associations]
symbol:TLX3 "T-cell leukemia homeobox protein 3"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0002087 "regulation of respiratory gaseous
exchange by neurological system process" evidence=IEA] [GO:0007417
"central nervous system development" evidence=IEA] [GO:0007585
"respiratory gaseous exchange" evidence=IEA] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IEA] [GO:0048665
"neuron fate specification" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104454 EMBL:AADN02035942 IPI:IPI00814284
Ensembl:ENSGALT00000003427 OMA:LAFPIAR ArrayExpress:F1NVB2
Uniprot:F1NVB2
Length = 136
Score = 98 (39.6 bits), Expect = 0.00022, P = 0.00022
Identities = 27/85 (31%), Positives = 43/85 (50%)
Query: 93 HEDEGGSP--RKKLR--LTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQ 148
H + +P RKK R ++ Q LE F L+ ++ LA+ L + QV+ WFQ
Sbjct: 1 HPYQNRTPPKRKKPRTSFSRVQICELEKRFHRQKYLASAERAALAKSLKMTDAQVKTWFQ 60
Query: 149 NRRARSKLKQTEVECELLKRCCEKL 173
NRR + + +QT E E ++ +L
Sbjct: 61 NRRTKWR-RQTAEEREAERQQASRL 84
>ZFIN|ZDB-GENE-980526-403 [details] [associations]
symbol:nkx2.2a "NK2 transcription factor related
2a" species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0014044 "Schwann cell development" evidence=IMP]
[GO:0008347 "glial cell migration" evidence=IMP] [GO:0033504 "floor
plate development" evidence=IMP] [GO:0008045 "motor neuron axon
guidance" evidence=IMP] [GO:0031018 "endocrine pancreas
development" evidence=IMP] [GO:0021514 "ventral spinal cord
interneuron differentiation" evidence=IGI] [GO:0021530 "spinal cord
oligodendrocyte cell fate specification" evidence=IMP] [GO:0021529
"spinal cord oligodendrocyte cell differentiation" evidence=IMP]
[GO:0021508 "floor plate formation" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980526-403 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0008045 GO:GO:0031018 GO:GO:0014044 GO:GO:0008347
GO:GO:0021530 GO:GO:0021508 GO:GO:0021514
GeneTree:ENSGT00700000104098 EMBL:BX927409 IPI:IPI00817820
Ensembl:ENSDART00000140549 ArrayExpress:F1QNE4 Bgee:F1QNE4
Uniprot:F1QNE4
Length = 273
Score = 112 (44.5 bits), Expect = 0.00022, P = 0.00022
Identities = 23/71 (32%), Positives = 39/71 (54%)
Query: 95 DEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARS 154
D G ++++ +K Q LE F++ LS +++ LA + L P QV++WFQN R +
Sbjct: 125 DSGKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKM 184
Query: 155 KLKQTEVECEL 165
K + E E+
Sbjct: 185 KRARAEKGMEV 195
>UNIPROTKB|F1N8W4 [details] [associations]
symbol:NKX2-1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104098 EMBL:AADN02003404 EMBL:AADN02003405
IPI:IPI00603869 Ensembl:ENSGALT00000037808 Uniprot:F1N8W4
Length = 319
Score = 113 (44.8 bits), Expect = 0.00023, P = 0.00023
Identities = 27/87 (31%), Positives = 49/87 (56%)
Query: 99 SPRKKLRL--TKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKL 156
+PR+K R+ ++ Q LE FK+ LS +++ LA ++L P QV++WFQN R + K
Sbjct: 131 TPRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKR 190
Query: 157 KQTEVECELLKRCCEKLKDENKRLQRE 183
+ + K ++++ EN Q++
Sbjct: 191 QAKD------KAAQQQMQQENGSCQQQ 211
>ZFIN|ZDB-GENE-030813-1 [details] [associations]
symbol:ved "ventrally expressed dharma/bozozok
antagonist" species:7955 "Danio rerio" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0036342 "post-anal tail morphogenesis"
evidence=IGI] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IGI;IDA] [GO:0042661 "regulation of mesodermal cell fate
specification" evidence=IGI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0060061 "Spemann organizer formation" evidence=IDA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-030813-1 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009953
HSSP:P02836 GO:GO:0036342 GO:GO:0042661 GO:GO:0060061
eggNOG:NOG246006 GeneTree:ENSGT00610000086217 EMBL:CU633882
EMBL:BC162293 EMBL:BC162308 EMBL:AB082517 IPI:IPI00997883
RefSeq:NP_898897.1 UniGene:Dr.88295 STRING:Q8AV71
Ensembl:ENSDART00000151832 GeneID:368201 KEGG:dre:368201 CTD:368201
HOGENOM:HOG000205900 HOVERGEN:HBG094227 InParanoid:Q8AV71
OMA:SIEWMAQ OrthoDB:EOG4VQ9QK NextBio:20812804 Uniprot:Q8AV71
Length = 278
Score = 112 (44.5 bits), Expect = 0.00023, P = 0.00023
Identities = 37/124 (29%), Positives = 57/124 (45%)
Query: 98 GSP----RKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRAR 153
GSP R + + Q ++LE FK ++ L + K L L L +Q+ WFQNRR
Sbjct: 135 GSPSSGRRPRTAFSSEQISSLERVFKRNAYLGAQDKAELCRTLKLTDKQIRNWFQNRRM- 193
Query: 154 SKLKQTEVECELLKRCCEKLKDENKRLQREVQELKSMKLSGAP-LYMKLPA---PTLTVC 209
KLK+T V+ L + C K+ +L S + + P Y + PA P +
Sbjct: 194 -KLKRT-VQDSLAQACQVKVASH----MMHYSDLHSFRAAPYPSFYPETPAAFAPPYPIS 247
Query: 210 PSCD 213
P+ +
Sbjct: 248 PAAE 251
>UNIPROTKB|E2R5Y1 [details] [associations]
symbol:HOXA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0048703
"embryonic viscerocranium morphogenesis" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0042474 "middle ear morphogenesis"
evidence=IEA] [GO:0035284 "brain segmentation" evidence=IEA]
[GO:0021658 "rhombomere 3 morphogenesis" evidence=IEA] [GO:0021568
"rhombomere 2 development" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0007379
"segment specification" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0001709 "cell fate determination"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0045665
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0008045 GO:GO:0002076
GO:GO:0007379 GO:GO:0009953 GO:GO:0001709 GO:GO:0035284
GO:GO:0048703 GO:GO:0042474 GO:GO:0021568
GeneTree:ENSGT00700000104446 KO:K09302 CTD:3199 OMA:NCGSGLN
GO:GO:0021658 EMBL:AAEX03009390 RefSeq:XP_851905.1
Ensembl:ENSCAFT00000004713 GeneID:609592 KEGG:cfa:609592
NextBio:20895182 Uniprot:E2R5Y1
Length = 374
Score = 114 (45.2 bits), Expect = 0.00024, P = 0.00024
Identities = 34/95 (35%), Positives = 49/95 (51%)
Query: 97 GGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKL 156
GGS R + T Q LE F + L ++ +A L+L RQV+VWFQNRR + K
Sbjct: 139 GGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHK- 197
Query: 157 KQTEVECELLKRCCEKLKD-ENKRLQREVQELKSM 190
+QT+ C+ + K K E+ E +E KS+
Sbjct: 198 RQTQ--CKENQNSEGKFKSLEDSEKVEEDEEEKSL 230
>ZFIN|ZDB-GENE-050114-2 [details] [associations]
symbol:lmx1bb "LIM homeobox transcription factor 1,
beta b" species:7955 "Danio rerio" [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0030917
"midbrain-hindbrain boundary development" evidence=IGI] [GO:0042472
"inner ear morphogenesis" evidence=IMP] [GO:0021592 "fourth
ventricle development" evidence=IGI] [GO:0060117 "auditory receptor
cell development" evidence=IMP] [GO:0032474 "otolith morphogenesis"
evidence=IMP] [GO:0048752 "semicircular canal morphogenesis"
evidence=IMP] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0002072 "optic cup morphogenesis involved in camera-type eye
development" evidence=IGI] [GO:0061386 "closure of optic fissure"
evidence=IGI] [GO:0060041 "retina development in camera-type eye"
evidence=IGI] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 ZFIN:ZDB-GENE-050114-2 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0060041 GO:GO:0032474
GO:GO:0048752 GO:GO:0030917 GO:GO:0060117 GO:GO:0061386
GO:GO:0021592 HOVERGEN:HBG052335 KO:K09371 EMBL:AY894989
IPI:IPI00631669 RefSeq:NP_001020338.2 UniGene:Dr.108678
ProteinModelPortal:Q4VJ29 STRING:Q4VJ29 GeneID:554360
KEGG:dre:554360 CTD:554360 InParanoid:Q4VJ29 NextBio:20880753
Uniprot:Q4VJ29
Length = 375
Score = 114 (45.2 bits), Expect = 0.00024, P = 0.00024
Identities = 47/175 (26%), Positives = 77/175 (44%)
Query: 24 DHQKKNGKKLILKDDQLLPSLTLGRRSENTLKSATKEKESTDVLQQAXXXXXXXXXXXXX 83
D Q + G + +LKD QLL R ++ L S + + ++ +
Sbjct: 124 DRQLRKGDEFVLKDGQLLCKSDY-EREKDLLGSVSPDDSDSE--KSEDEELDIKPEKGSG 180
Query: 84 XXXKGIRDHHEDEGGSPRKKLR----LTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLR 139
KG D+G PR+ R LT Q + +F+ S K ++ LA + L
Sbjct: 181 GTGKG------DDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLS 234
Query: 140 PRQVEVWFQNRRARSKLKQTEVECELLKRCCEKLKDENKRLQREVQELKSMKLSG 194
R V+VWFQN+RA+ K +L +R ++ + E + QR QE+ S ++ G
Sbjct: 235 VRVVQVWFQNQRAKMK--------KLARR--QQQQQEQQNSQRLGQEVMSNRMEG 279
>UNIPROTKB|F1MXD3 [details] [associations]
symbol:LOC522046 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060135
"maternal process involved in female pregnancy" evidence=IEA]
[GO:0050885 "neuromuscular process controlling balance"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0042472 "inner ear morphogenesis" evidence=IEA]
[GO:0007566 "embryo implantation" evidence=IEA] [GO:0007420 "brain
development" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0007420 GO:GO:0060135 GO:GO:0043565
GO:GO:0050885 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042472 GO:GO:0007566
GeneTree:ENSGT00700000104333 OMA:PGAEDWK EMBL:DAAA02059466
IPI:IPI00843366 Ensembl:ENSBTAT00000045429 Uniprot:F1MXD3
Length = 327
Score = 113 (44.8 bits), Expect = 0.00024, P = 0.00024
Identities = 45/156 (28%), Positives = 68/156 (43%)
Query: 17 LPQSDDHDHQKKNGKKLILKDDQLLPSLTLGRRS-ENTLKSATKEKE----STD-VLQQA 70
L + H + + +K +L+D P+ R S E LK+ KE S D ++ +
Sbjct: 110 LTPAGSHLPRPEASEKALLRDSS--PASGTDRDSPEPLLKADPDHKELDSKSPDEIILEE 167
Query: 71 XXXXXXXXXXXXXXXXKGIRDHHEDEGGSPRKKLR--LTKPQFATLEDTFKEHSTLSPKQ 128
KG + E + +KK R ++ Q LE TF LS +
Sbjct: 168 SDSEEGKKEAGTEDWKKGA-ESPEKKPACRKKKTRTVFSRSQVFQLESTFDMKRYLSSSE 226
Query: 129 KQGLAEKLNLRPRQVEVWFQNRRARSKLKQTEVECE 164
+ GLA L+L QV++WFQNRR + K +Q E E
Sbjct: 227 RAGLAASLHLTETQVKIWFQNRRNKWK-RQLAAELE 261
>UNIPROTKB|F1SHT0 [details] [associations]
symbol:HOXA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048703 "embryonic
viscerocranium morphogenesis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0042474 "middle ear morphogenesis"
evidence=IEA] [GO:0035284 "brain segmentation" evidence=IEA]
[GO:0021658 "rhombomere 3 morphogenesis" evidence=IEA] [GO:0021568
"rhombomere 2 development" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0007379
"segment specification" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0001709 "cell fate determination"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0045665
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0008045 GO:GO:0002076
GO:GO:0007379 GO:GO:0009953 GO:GO:0001709 GO:GO:0035284
GO:GO:0048703 GO:GO:0042474 GO:GO:0021568
GeneTree:ENSGT00700000104446 KO:K09302 OMA:NCGSGLN GO:GO:0021658
EMBL:CU570959 RefSeq:XP_003134891.1 Ensembl:ENSSSCT00000018187
GeneID:100519993 KEGG:ssc:100519993 Uniprot:F1SHT0
Length = 380
Score = 114 (45.2 bits), Expect = 0.00024, P = 0.00024
Identities = 34/95 (35%), Positives = 49/95 (51%)
Query: 97 GGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKL 156
GGS R + T Q LE F + L ++ +A L+L RQV+VWFQNRR + K
Sbjct: 145 GGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHK- 203
Query: 157 KQTEVECELLKRCCEKLKD-ENKRLQREVQELKSM 190
+QT+ C+ + K K E+ E +E KS+
Sbjct: 204 RQTQ--CKENQNSEGKFKSLEDSEKVEEDEEEKSL 236
>UNIPROTKB|I3L885 [details] [associations]
symbol:NKX2-6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060039
"pericardium development" evidence=IEA] [GO:0060037 "pharyngeal
system development" evidence=IEA] [GO:0055015 "ventricular cardiac
muscle cell development" evidence=IEA] [GO:0055014 "atrial cardiac
muscle cell development" evidence=IEA] [GO:0048565 "digestive tract
development" evidence=IEA] [GO:0043586 "tongue development"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0035050 "embryonic heart tube
development" evidence=IEA] [GO:0021854 "hypothalamus development"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043066
GO:GO:0008284 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0060037 GO:GO:0048565 GO:GO:0055015 GO:GO:0021854
GO:GO:0060039 GO:GO:0035050 GO:GO:0043586 GO:GO:0055014
GeneTree:ENSGT00700000104098 EMBL:CU607064
Ensembl:ENSSSCT00000023530 OMA:GRRDEND Uniprot:I3L885
Length = 329
Score = 113 (44.8 bits), Expect = 0.00025, P = 0.00025
Identities = 25/68 (36%), Positives = 40/68 (58%)
Query: 100 PRKKLRL--TKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLK 157
PR+K R+ ++ Q LE FK+ LS +++ LA L L QV++WFQNRR + K +
Sbjct: 161 PRRKPRVLFSQAQVLALERRFKQQRYLSAPEREHLASALQLTSTQVKIWFQNRRYKCKRQ 220
Query: 158 QTEVECEL 165
+ + E+
Sbjct: 221 RQDKSLEM 228
>MGI|MGI:107178 [details] [associations]
symbol:Hmx1 "H6 homeobox 1" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0003677 "DNA binding"
evidence=ISO;IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IC] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO;IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:107178 GO:GO:0007275
GO:GO:0005634 GO:GO:0045892 GO:GO:0003677 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HSSP:P13297 CTD:3166
eggNOG:NOG241326 HOGENOM:HOG000231923 HOVERGEN:HBG031610 KO:K09349
OMA:GRAESAW EMBL:AF009614 EMBL:AF009367 IPI:IPI00116368
RefSeq:NP_034575.1 UniGene:Mm.358606 ProteinModelPortal:O70218
SMR:O70218 STRING:O70218 PhosphoSite:O70218 PRIDE:O70218
DNASU:15371 Ensembl:ENSMUST00000087674 GeneID:15371 KEGG:mmu:15371
UCSC:uc008xds.1 GeneTree:ENSGT00700000104333 InParanoid:O70218
NextBio:288010 Bgee:O70218 CleanEx:MM_HMX1 Genevestigator:O70218
Uniprot:O70218
Length = 332
Score = 113 (44.8 bits), Expect = 0.00025, P = 0.00025
Identities = 31/73 (42%), Positives = 39/73 (53%)
Query: 94 EDEGGSPRKKLR--LTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRR 151
E GG RKK R ++ Q LE TF LS ++ GLA L L QV++WFQNRR
Sbjct: 185 EARGGR-RKKTRTVFSRSQVFQLESTFDLKRYLSSAERAGLAASLQLTETQVKIWFQNRR 243
Query: 152 ARSKLKQTEVECE 164
+ K +Q E E
Sbjct: 244 NKWK-RQLAAELE 255
>RGD|1304928 [details] [associations]
symbol:Hmx1 "H6 family homeobox 1" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
RGD:1304928 GO:GO:0005634 GO:GO:0045892 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
OMA:GRAESAW GeneTree:ENSGT00700000104333 EMBL:CH473963
IPI:IPI00201526 UniGene:Rn.24574 Ensembl:ENSRNOT00000012304
Uniprot:D3ZBP8
Length = 333
Score = 113 (44.8 bits), Expect = 0.00025, P = 0.00025
Identities = 31/73 (42%), Positives = 39/73 (53%)
Query: 94 EDEGGSPRKKLR--LTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRR 151
E GG RKK R ++ Q LE TF LS ++ GLA L L QV++WFQNRR
Sbjct: 186 EARGGR-RKKTRTVFSRSQVFQLESTFDLKRYLSSAERAGLAASLQLTETQVKIWFQNRR 244
Query: 152 ARSKLKQTEVECE 164
+ K +Q E E
Sbjct: 245 NKWK-RQLAAELE 256
>UNIPROTKB|J9NTV2 [details] [associations]
symbol:J9NTV2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 OMA:IVHFGCC EMBL:AAEX03000743
GeneTree:ENSGT00640000091698 Ensembl:ENSCAFT00000043913
Uniprot:J9NTV2
Length = 184
Score = 107 (42.7 bits), Expect = 0.00026, P = 0.00026
Identities = 23/61 (37%), Positives = 36/61 (59%)
Query: 99 SPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRAR-SKLK 157
S RK+ T+ Q A LE F ++ +P ++ +A KL + P ++VWF+N RA+ K K
Sbjct: 23 SQRKRTMFTEKQLADLECLFSKNPYPNPSLQREMASKLEIHPTVLQVWFKNHRAKLKKAK 82
Query: 158 Q 158
Q
Sbjct: 83 Q 83
>UNIPROTKB|F1NHM4 [details] [associations]
symbol:CDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000976 EMBL:AADN02013531
EMBL:AADN02013532 IPI:IPI00820756 Ensembl:ENSGALT00000039471
Uniprot:F1NHM4
Length = 60
Score = 93 (37.8 bits), Expect = 0.00027, P = 0.00027
Identities = 22/57 (38%), Positives = 34/57 (59%)
Query: 101 RKKLRL--TKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSK 155
++K R+ T Q LE F + ++ ++K LA L L RQV++WFQNRRA+ +
Sbjct: 1 KEKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAANLGLSERQVKIWFQNRRAKER 57
>UNIPROTKB|F1P4V0 [details] [associations]
symbol:F1P4V0 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0048706 "embryonic skeletal system development"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104161 EMBL:AADN02020016 IPI:IPI00596552
Ensembl:ENSGALT00000015078 OMA:VKENQIS Uniprot:F1P4V0
Length = 67
Score = 93 (37.8 bits), Expect = 0.00027, P = 0.00027
Identities = 21/51 (41%), Positives = 28/51 (54%)
Query: 110 QFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLKQTE 160
Q LE F LS ++ +A L LR QV+VWFQNRR + K ++ E
Sbjct: 12 QLTELEKEFHFSRYLSRARRLEVARSLRLRDAQVKVWFQNRRMKQKKRERE 62
>UNIPROTKB|P13544 [details] [associations]
symbol:HOXD1 "Homeobox protein Hox-D1" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG314488 EMBL:M23611 IPI:IPI01017276
PIR:JU0068 ProteinModelPortal:P13544 SMR:P13544 InParanoid:P13544
Uniprot:P13544
Length = 67
Score = 93 (37.8 bits), Expect = 0.00027, P = 0.00027
Identities = 21/51 (41%), Positives = 28/51 (54%)
Query: 110 QFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLKQTE 160
Q LE F LS ++ +A L LR QV+VWFQNRR + K ++ E
Sbjct: 12 QLTELEKEFHFSRYLSRARRLEVARSLRLRDAQVKVWFQNRRMKQKKRERE 62
>RGD|1586211 [details] [associations]
symbol:Hoxb8 "homeo box B8" species:10116 "Rattus norvegicus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007625 "grooming behavior" evidence=ISO]
[GO:0008344 "adult locomotory behavior" evidence=ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=ISO]
[GO:0019233 "sensory perception of pain" evidence=ISO] [GO:0021516
"dorsal spinal cord development" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation"
evidence=ISO;ISS] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=ISO] [GO:0048705 "skeletal system
morphogenesis" evidence=ISO] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
RGD:1586211 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GO:GO:0045638 eggNOG:NOG314669 EMBL:M37565
IPI:IPI00476117 PIR:A43559 UniGene:Rn.231433
ProteinModelPortal:P18863 SMR:P18863 STRING:P18863 UCSC:RGD:1586211
Genevestigator:P18863 Uniprot:P18863
Length = 92
Score = 93 (37.8 bits), Expect = 0.00027, P = 0.00027
Identities = 26/80 (32%), Positives = 45/80 (56%)
Query: 105 RLTKPQFATLE--DTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLKQTEVE 162
R T ++ TLE F + L+ K++ ++ L L RQV++WFQNRR + K + + +
Sbjct: 15 RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDK 74
Query: 163 CELLKRCCEKLKDENKRLQR 182
K CE+ + E ++L+R
Sbjct: 75 FPSSK--CEQEELEKEKLER 92
>UNIPROTKB|F1NJ78 [details] [associations]
symbol:NKX2-1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104098 OMA:MRNSASA EMBL:AADN02003404
EMBL:AADN02003405 IPI:IPI00820181 Ensembl:ENSGALT00000032575
Uniprot:F1NJ78
Length = 345
Score = 113 (44.8 bits), Expect = 0.00027, P = 0.00027
Identities = 27/87 (31%), Positives = 49/87 (56%)
Query: 99 SPRKKLRL--TKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKL 156
+PR+K R+ ++ Q LE FK+ LS +++ LA ++L P QV++WFQN R + K
Sbjct: 157 TPRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKR 216
Query: 157 KQTEVECELLKRCCEKLKDENKRLQRE 183
+ + K ++++ EN Q++
Sbjct: 217 QAKD------KAAQQQMQQENGSCQQQ 237
>ZFIN|ZDB-GENE-030131-6336 [details] [associations]
symbol:zgc:171531 "zgc:171531" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-030131-6336 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104098 HOVERGEN:HBG006689 OMA:FSHSAMG
EMBL:BX322615 EMBL:BC162156 EMBL:BC162157 IPI:IPI00508292
UniGene:Dr.107185 Ensembl:ENSDART00000110871 Uniprot:B3DFT3
Length = 345
Score = 113 (44.8 bits), Expect = 0.00027, P = 0.00027
Identities = 24/72 (33%), Positives = 43/72 (59%)
Query: 99 SPRKKLRL--TKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKL 156
+PR+K R+ ++ Q LE FK+ LS +++ LA ++L P QV++WFQN R + K
Sbjct: 158 APRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKR 217
Query: 157 KQTEVECELLKR 168
+ + + L++
Sbjct: 218 QAKDKAAQQLQQ 229
>MGI|MGI:96071 [details] [associations]
symbol:Hesx1 "homeobox gene expressed in ES cells"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007420
"brain development" evidence=IMP] [GO:0008022 "protein C-terminus
binding" evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=NAS] [GO:0030916 "otic vesicle formation" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043584 "nose development" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0048853
"forebrain morphogenesis" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96071 GO:GO:0005634
GO:GO:0045892 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0008134
CTD:8820 eggNOG:NOG326168 HOGENOM:HOG000112889 HOVERGEN:HBG004226
KO:K09354 EMBL:AC124603 GO:GO:0030916 GO:GO:0043584
GeneTree:ENSGT00700000104128 GO:GO:0048853 OMA:PWADTCS
OrthoDB:EOG46T32J EMBL:X80040 EMBL:U40720 EMBL:AK082831
EMBL:BC132051 EMBL:BC132053 EMBL:BC145262 IPI:IPI00123659
IPI:IPI00310700 PIR:A55882 RefSeq:NP_034550.2 UniGene:Mm.4802
ProteinModelPortal:Q61658 STRING:Q61658 PRIDE:Q61658
Ensembl:ENSMUST00000035433 GeneID:15209 KEGG:mmu:15209
InParanoid:Q61658 NextBio:287773 CleanEx:MM_HESX1
Genevestigator:Q61658 GermOnline:ENSMUSG00000040726 Uniprot:Q61658
Length = 185
Score = 107 (42.7 bits), Expect = 0.00027, P = 0.00027
Identities = 22/68 (32%), Positives = 39/68 (57%)
Query: 101 RKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLKQTE 160
R + T+ Q LE+ F+ + ++ LA+KLNL ++++WFQNRRA+ K + E
Sbjct: 110 RPRTAFTQNQVEVLENVFRVNCYPGIDIREDLAQKLNLEEDRIQIWFQNRRAKMKRSRRE 169
Query: 161 VECELLKR 168
+ + K+
Sbjct: 170 SQFLMAKK 177
>RGD|1563858 [details] [associations]
symbol:Hesx1 "HESX homeobox 1" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003682
"chromatin binding" evidence=IEA;ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0030916 "otic vesicle formation" evidence=IEA;ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0043584 "nose
development" evidence=IEA;ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0047485
"protein N-terminus binding" evidence=IEA;ISO] [GO:0048853
"forebrain morphogenesis" evidence=IEA;ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:1563858 GO:GO:0005634
GO:GO:0045892 GO:GO:0043565 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 CTD:8820 KO:K09354 GO:GO:0030916
GO:GO:0043584 GeneTree:ENSGT00700000104128 GO:GO:0048853
OMA:PWADTCS OrthoDB:EOG46T32J EMBL:CH474067 IPI:IPI00197102
RefSeq:NP_001102576.1 UniGene:Rn.218632 Ensembl:ENSRNOT00000019113
GeneID:498575 KEGG:rno:498575 UCSC:RGD:1563858 NextBio:700198
Uniprot:D4AEG9
Length = 185
Score = 107 (42.7 bits), Expect = 0.00027, P = 0.00027
Identities = 24/66 (36%), Positives = 39/66 (59%)
Query: 101 RKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLKQTE 160
R + T+ Q LE+ F+ + ++ LA+KLNL ++++WFQNRRA KLK++
Sbjct: 110 RPRTAFTQNQVEVLENVFRMNCYPGIDIREDLAQKLNLEEDRIQIWFQNRRA--KLKRSR 167
Query: 161 VECELL 166
E + L
Sbjct: 168 RESQFL 173
>TAIR|locus:2167230 [details] [associations]
symbol:HDG9 "AT5G17320" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 EMBL:AB005238 ProtClustDB:CLSN2679643
IPI:IPI00529269 RefSeq:NP_197234.1 UniGene:At.54882
ProteinModelPortal:Q9FFI0 SMR:Q9FFI0 EnsemblPlants:AT5G17320.1
GeneID:831598 KEGG:ath:AT5G17320 TAIR:At5g17320 eggNOG:KOG0493
InParanoid:Q9FFI0 PhylomeDB:Q9FFI0 Genevestigator:Q9FFI0
Uniprot:Q9FFI0
Length = 718
Score = 117 (46.2 bits), Expect = 0.00027, P = 0.00027
Identities = 26/77 (33%), Positives = 44/77 (57%)
Query: 105 RLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLKQTEVECE 164
R T Q LE FKE Q++ L E+LNL+P+Q++ WFQN+R ++K + +
Sbjct: 32 RHTNEQIHRLETYFKECPHPDEFQRRLLGEELNLKPKQIKFWFQNKRTQAKSHNEKADNA 91
Query: 165 LLKRCCEKLKDENKRLQ 181
L+ K++ EN+ ++
Sbjct: 92 ALRAENIKIRRENESME 108
>UNIPROTKB|F1NM26 [details] [associations]
symbol:MEOX2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0001757 "somite
specification" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00660000095141 OMA:DHTLFGC
EMBL:AADN02000860 EMBL:AADN02000861 EMBL:AADN02000862
EMBL:AADN02000863 EMBL:AADN02000864 IPI:IPI00604288
Ensembl:ENSGALT00000017555 ArrayExpress:F1NM26 Uniprot:F1NM26
Length = 302
Score = 112 (44.5 bits), Expect = 0.00028, P = 0.00028
Identities = 25/66 (37%), Positives = 37/66 (56%)
Query: 91 DHHEDEGGSPRK-KLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQN 149
++ + PRK + TK Q LE F H+ L+ ++ +A L+L RQV+VWFQN
Sbjct: 176 NYKSEVNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQN 235
Query: 150 RRARSK 155
RR + K
Sbjct: 236 RRMKWK 241
>RGD|1304985 [details] [associations]
symbol:Nkx2-4 "NK2 homeobox 4" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1304985 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104098 CTD:644524 KO:K09344 OMA:FSHSAMG
IPI:IPI00193898 RefSeq:XP_001055558.3 RefSeq:XP_345446.3
Ensembl:ENSRNOT00000016915 GeneID:366213 KEGG:rno:366213
UCSC:RGD:1304985 Uniprot:D3ZTX2
Length = 353
Score = 113 (44.8 bits), Expect = 0.00028, P = 0.00028
Identities = 24/72 (33%), Positives = 43/72 (59%)
Query: 99 SPRKKLRL--TKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKL 156
+PR+K R+ ++ Q LE FK+ LS +++ LA ++L P QV++WFQN R + K
Sbjct: 185 APRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKR 244
Query: 157 KQTEVECELLKR 168
+ + + L++
Sbjct: 245 QAKDKAAQQLQQ 256
>UNIPROTKB|A5D7C5 [details] [associations]
symbol:MEOX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] [GO:0060021 "palate development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0001757
"somite specification" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
GO:GO:0060173 eggNOG:NOG250192 GO:GO:0007519 GO:GO:0001757
GeneTree:ENSGT00660000095141 HOGENOM:HOG000230987
HOVERGEN:HBG052456 KO:K09322 CTD:4223 OMA:DHTLFGC OrthoDB:EOG4PZJ7H
EMBL:DAAA02009993 EMBL:DAAA02009994 EMBL:DAAA02009995 EMBL:BC140506
IPI:IPI00711174 RefSeq:NP_001091514.1 UniGene:Bt.63482 SMR:A5D7C5
Ensembl:ENSBTAT00000004198 GeneID:518540 KEGG:bta:518540
InParanoid:A5D7C5 NextBio:20872676 Uniprot:A5D7C5
Length = 303
Score = 112 (44.5 bits), Expect = 0.00028, P = 0.00028
Identities = 25/66 (37%), Positives = 37/66 (56%)
Query: 91 DHHEDEGGSPRK-KLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQN 149
++ + PRK + TK Q LE F H+ L+ ++ +A L+L RQV+VWFQN
Sbjct: 177 NYKSEVNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQN 236
Query: 150 RRARSK 155
RR + K
Sbjct: 237 RRMKWK 242
>UNIPROTKB|E2RDU9 [details] [associations]
symbol:MEOX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060173
"limb development" evidence=IEA] [GO:0060021 "palate development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0001757
"somite specification" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
GO:GO:0060173 GO:GO:0007519 GO:GO:0001757
GeneTree:ENSGT00660000095141 KO:K09322 CTD:4223 OMA:DHTLFGC
EMBL:AAEX03009347 RefSeq:XP_539446.2 Ensembl:ENSCAFT00000003805
GeneID:482329 KEGG:cfa:482329 NextBio:20856948 Uniprot:E2RDU9
Length = 303
Score = 112 (44.5 bits), Expect = 0.00028, P = 0.00028
Identities = 25/66 (37%), Positives = 37/66 (56%)
Query: 91 DHHEDEGGSPRK-KLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQN 149
++ + PRK + TK Q LE F H+ L+ ++ +A L+L RQV+VWFQN
Sbjct: 177 NYKSEVNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQN 236
Query: 150 RRARSK 155
RR + K
Sbjct: 237 RRMKWK 242
>UNIPROTKB|F1SEJ3 [details] [associations]
symbol:MEOX2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] [GO:0060021 "palate development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0001757
"somite specification" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
GO:GO:0060173 GO:GO:0007519 GO:GO:0001757
GeneTree:ENSGT00660000095141 KO:K09322 OMA:DHTLFGC EMBL:FP565218
RefSeq:XP_003482725.1 Ensembl:ENSSSCT00000016732 GeneID:100736898
KEGG:ssc:100736898 Uniprot:F1SEJ3
Length = 303
Score = 112 (44.5 bits), Expect = 0.00028, P = 0.00028
Identities = 25/66 (37%), Positives = 37/66 (56%)
Query: 91 DHHEDEGGSPRK-KLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQN 149
++ + PRK + TK Q LE F H+ L+ ++ +A L+L RQV+VWFQN
Sbjct: 177 NYKSEVNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQN 236
Query: 150 RRARSK 155
RR + K
Sbjct: 237 RRMKWK 242
>MGI|MGI:103219 [details] [associations]
symbol:Meox2 "mesenchyme homeobox 2" species:10090 "Mus
musculus" [GO:0001525 "angiogenesis" evidence=IMP] [GO:0001757
"somite specification" evidence=IGI] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=ISO]
[GO:0060021 "palate development" evidence=IMP] [GO:0060173 "limb
development" evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:103219 GO:GO:0005737 GO:GO:0016607
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
GO:GO:0060173 eggNOG:NOG250192 GO:GO:0007519 GO:GO:0001757
GeneTree:ENSGT00660000095141 HOGENOM:HOG000230987
HOVERGEN:HBG052456 KO:K09322 CTD:4223 OMA:DHTLFGC OrthoDB:EOG4PZJ7H
EMBL:Z16406 EMBL:AK028352 EMBL:AK031152 EMBL:AK142690 EMBL:S79168
IPI:IPI00108444 PIR:B49122 RefSeq:NP_032610.1 UniGene:Mm.341398
ProteinModelPortal:P32443 SMR:P32443 STRING:P32443
PhosphoSite:P32443 PRIDE:P32443 Ensembl:ENSMUST00000041183
GeneID:17286 KEGG:mmu:17286 UCSC:uc007nkf.1 InParanoid:P32443
NextBio:291796 Bgee:P32443 CleanEx:MM_MEOX2 Genevestigator:P32443
GermOnline:ENSMUSG00000036144 Uniprot:P32443
Length = 303
Score = 112 (44.5 bits), Expect = 0.00028, P = 0.00028
Identities = 25/66 (37%), Positives = 37/66 (56%)
Query: 91 DHHEDEGGSPRK-KLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQN 149
++ + PRK + TK Q LE F H+ L+ ++ +A L+L RQV+VWFQN
Sbjct: 177 NYKSEVNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQN 236
Query: 150 RRARSK 155
RR + K
Sbjct: 237 RRMKWK 242
>RGD|3079 [details] [associations]
symbol:Meox2 "mesenchyme homeobox 2" species:10116 "Rattus
norvegicus" [GO:0001525 "angiogenesis" evidence=IEA;ISO] [GO:0001757
"somite specification" evidence=IEA;ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007519 "skeletal muscle tissue
development" evidence=IEA;ISO] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0060021 "palate development" evidence=IEA;ISO]
[GO:0060173 "limb development" evidence=IEA;ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:3079 GO:GO:0005737 GO:GO:0016607
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
GO:GO:0060173 eggNOG:NOG250192 GO:GO:0007519 GO:GO:0001757
HOGENOM:HOG000230987 HOVERGEN:HBG052456 KO:K09322 CTD:4223
OrthoDB:EOG4PZJ7H EMBL:Z17223 IPI:IPI00210232 PIR:A48130
RefSeq:NP_058845.1 UniGene:Rn.34890 ProteinModelPortal:P39020
SMR:P39020 STRING:P39020 GeneID:29279 KEGG:rno:29279 UCSC:RGD:3079
InParanoid:P39020 NextBio:608651 Genevestigator:P39020
GermOnline:ENSRNOG00000006588 Uniprot:P39020
Length = 303
Score = 112 (44.5 bits), Expect = 0.00028, P = 0.00028
Identities = 25/66 (37%), Positives = 37/66 (56%)
Query: 91 DHHEDEGGSPRK-KLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQN 149
++ + PRK + TK Q LE F H+ L+ ++ +A L+L RQV+VWFQN
Sbjct: 177 NYKSEVNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQN 236
Query: 150 RRARSK 155
RR + K
Sbjct: 237 RRMKWK 242
>UNIPROTKB|P39020 [details] [associations]
symbol:Meox2 "Homeobox protein MOX-2" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:3079 GO:GO:0005737 GO:GO:0016607
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
GO:GO:0060173 eggNOG:NOG250192 GO:GO:0007519 GO:GO:0001757
HOGENOM:HOG000230987 HOVERGEN:HBG052456 KO:K09322 CTD:4223
OrthoDB:EOG4PZJ7H EMBL:Z17223 IPI:IPI00210232 PIR:A48130
RefSeq:NP_058845.1 UniGene:Rn.34890 ProteinModelPortal:P39020
SMR:P39020 STRING:P39020 GeneID:29279 KEGG:rno:29279 UCSC:RGD:3079
InParanoid:P39020 NextBio:608651 Genevestigator:P39020
GermOnline:ENSRNOG00000006588 Uniprot:P39020
Length = 303
Score = 112 (44.5 bits), Expect = 0.00028, P = 0.00028
Identities = 25/66 (37%), Positives = 37/66 (56%)
Query: 91 DHHEDEGGSPRK-KLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQN 149
++ + PRK + TK Q LE F H+ L+ ++ +A L+L RQV+VWFQN
Sbjct: 177 NYKSEVNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQN 236
Query: 150 RRARSK 155
RR + K
Sbjct: 237 RRMKWK 242
>MGI|MGI:97349 [details] [associations]
symbol:Nkx2-4 "NK2 transcription factor related, locus 4
(Drosophila)" species:10090 "Mus musculus" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:97349 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 eggNOG:NOG328614
GeneTree:ENSGT00700000104098 HOGENOM:HOG000231923
HOVERGEN:HBG006689 CTD:644524 KO:K09344 OMA:FSHSAMG EMBL:AF202038
EMBL:AF202039 EMBL:AL928876 IPI:IPI00111298 RefSeq:NP_075993.1
UniGene:Mm.315498 ProteinModelPortal:Q9EQM3 SMR:Q9EQM3
STRING:Q9EQM3 PaxDb:Q9EQM3 PRIDE:Q9EQM3 DNASU:228731
Ensembl:ENSMUST00000067020 GeneID:228731 KEGG:mmu:228731
UCSC:uc008mss.1 InParanoid:A2ATK2 NextBio:379096 Bgee:Q9EQM3
Genevestigator:Q9EQM3 GermOnline:ENSMUSG00000054160 Uniprot:Q9EQM3
Length = 354
Score = 113 (44.8 bits), Expect = 0.00028, P = 0.00028
Identities = 24/72 (33%), Positives = 43/72 (59%)
Query: 99 SPRKKLRL--TKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKL 156
+PR+K R+ ++ Q LE FK+ LS +++ LA ++L P QV++WFQN R + K
Sbjct: 186 APRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKR 245
Query: 157 KQTEVECELLKR 168
+ + + L++
Sbjct: 246 QAKDKAAQQLQQ 257
>UNIPROTKB|H0YHX3 [details] [associations]
symbol:HOXA4 "Homeobox protein Hox-A4" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:AC004080 HGNC:HGNC:5105 Ensembl:ENST00000511914 Uniprot:H0YHX3
Length = 140
Score = 99 (39.9 bits), Expect = 0.00028, P = 0.00028
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 97 GGSP-RKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSK 155
GG P R + T+ Q LE F + L+ +++ +A L L RQV++WFQNRR + K
Sbjct: 32 GGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWK 91
>UNIPROTKB|P50222 [details] [associations]
symbol:MEOX2 "Homeobox protein MOX-2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0001757 "somite specification" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0008015 "blood
circulation" evidence=TAS] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005737 GO:GO:0008015
GO:GO:0016607 GO:GO:0043565 GO:GO:0003700 GO:GO:0001525
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0060021 GO:GO:0060173 eggNOG:NOG250192 GO:GO:0007519
GO:GO:0001757 HOGENOM:HOG000230987 HOVERGEN:HBG052456 KO:K09322
EMBL:X82629 EMBL:L36328 EMBL:AC005550 EMBL:AC004452 EMBL:BC017021
IPI:IPI00030729 PIR:A55641 PIR:A56837 RefSeq:NP_005915.2
UniGene:Hs.170355 ProteinModelPortal:P50222 SMR:P50222
IntAct:P50222 MINT:MINT-202865 STRING:P50222 PhosphoSite:P50222
DMDM:93141286 PRIDE:P50222 DNASU:4223 Ensembl:ENST00000262041
GeneID:4223 KEGG:hsa:4223 UCSC:uc003stc.3 CTD:4223
GeneCards:GC07M015617 H-InvDB:HIX0006493 HGNC:HGNC:7014 MIM:600535
neXtProt:NX_P50222 PharmGKB:PA30748 InParanoid:P50222 OMA:DHTLFGC
OrthoDB:EOG4PZJ7H PhylomeDB:P50222 GenomeRNAi:4223 NextBio:16667
ArrayExpress:P50222 Bgee:P50222 CleanEx:HS_MEOX2
Genevestigator:P50222 GermOnline:ENSG00000106511 Uniprot:P50222
Length = 304
Score = 112 (44.5 bits), Expect = 0.00028, P = 0.00028
Identities = 25/66 (37%), Positives = 37/66 (56%)
Query: 91 DHHEDEGGSPRK-KLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQN 149
++ + PRK + TK Q LE F H+ L+ ++ +A L+L RQV+VWFQN
Sbjct: 178 NYKSEVNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQN 237
Query: 150 RRARSK 155
RR + K
Sbjct: 238 RRMKWK 243
>FB|FBgn0004110 [details] [associations]
symbol:tin "tinman" species:7227 "Drosophila melanogaster"
[GO:0008354 "germ cell migration" evidence=IMP;TAS] [GO:0007506
"gonadal mesoderm development" evidence=IMP] [GO:0008406 "gonad
development" evidence=TAS] [GO:0007280 "pole cell migration"
evidence=TAS] [GO:0000980 "RNA polymerase II distal enhancer
sequence-specific DNA binding" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEP;IDA;IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS;IDA;NAS] [GO:0007525 "somatic muscle development"
evidence=NAS] [GO:0007522 "visceral muscle development"
evidence=NAS] [GO:0007498 "mesoderm development"
evidence=IEP;NAS;TAS] [GO:0007510 "cardioblast cell fate
determination" evidence=TAS] [GO:0007507 "heart development"
evidence=TAS] [GO:0007501 "mesodermal cell fate specification"
evidence=TAS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0001708 "cell fate specification"
evidence=NAS] [GO:0007552 "metamorphosis" evidence=TAS] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0035051 "cardiocyte differentiation" evidence=IMP;TAS]
[GO:0010002 "cardioblast differentiation" evidence=IMP] [GO:0061320
"pericardial nephrocyte differentiation" evidence=IMP] [GO:0048542
"lymph gland development" evidence=IMP] [GO:0035050 "embryonic
heart tube development" evidence=IMP] [GO:0007435 "salivary gland
morphogenesis" evidence=IMP] [GO:0055007 "cardiac muscle cell
differentiation" evidence=IMP] [GO:0071907 "determination of
digestive tract left/right asymmetry" evidence=IMP] [GO:0048615
"embryonic anterior midgut (ectodermal) morphogenesis"
evidence=IMP] [GO:0061101 "neuroendocrine cell differentiation"
evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 EMBL:AE014297 GO:GO:0005634 GO:GO:0045892
GO:GO:0007280 GO:GO:0007435 GO:GO:0007510 GO:GO:0045944
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003705 GO:GO:0007506
GO:GO:0007501 GO:GO:0000980 GO:GO:0055007 GO:GO:0007552
GO:GO:0048542 GO:GO:0061101 GO:GO:0035050 GO:GO:0061320
eggNOG:NOG310976 GeneTree:ENSGT00700000104098 EMBL:X55192
EMBL:BT015242 EMBL:AY368079 EMBL:AY368080 EMBL:AY368081
EMBL:AY368082 EMBL:AY368083 EMBL:AY368084 EMBL:AY368085
EMBL:AY368086 EMBL:AY368087 EMBL:AY368088 EMBL:AY368089
EMBL:AY368090 EMBL:AY368091 EMBL:AY368092 EMBL:AY368093
EMBL:AY368094 EMBL:AY368095 EMBL:AY368096 EMBL:AY368097
EMBL:AY368098 EMBL:AY368099 EMBL:AY368100 EMBL:AY368101
EMBL:AY368102 EMBL:AY368103 EMBL:AY368104 EMBL:AY368105
EMBL:AY368106 EMBL:AY368107 EMBL:M27292 PIR:A43561
RefSeq:NP_524433.1 UniGene:Dm.21675 ProteinModelPortal:P22711
SMR:P22711 IntAct:P22711 STRING:P22711 EnsemblMetazoa:FBtr0084086
GeneID:42536 KEGG:dme:Dmel_CG7895 UCSC:CG7895-RA CTD:42536
FlyBase:FBgn0004110 InParanoid:P22711 KO:K09352 OMA:SEYIPTP
OrthoDB:EOG4BK3KV PhylomeDB:P22711 GenomeRNAi:42536 NextBio:829303
Bgee:P22711 GermOnline:CG7895 Uniprot:P22711
Length = 416
Score = 114 (45.2 bits), Expect = 0.00028, P = 0.00028
Identities = 26/76 (34%), Positives = 47/76 (61%)
Query: 101 RKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKLKQTE 160
+ ++ ++ Q LE F+ L+ +++ +A+KLNL QV++WFQNRR +SK + +
Sbjct: 303 KPRVLFSQAQVLELECRFRLKKYLTGAEREIIAQKLNLSATQVKIWFQNRRYKSK--RGD 360
Query: 161 VECELLKRCCEKLKDE 176
++CE + + KLK E
Sbjct: 361 IDCEGIAKHL-KLKSE 375
>UNIPROTKB|O76762 [details] [associations]
symbol:abd-A "Homeobox protein abdominal-A homolog"
species:7165 "Anopheles gambiae" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 eggNOG:NOG328968 OrthoDB:EOG4F7M1W
Gene3D:1.10.10.60 InterPro:IPR022132 InterPro:IPR020479
Pfam:PF12407 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AF080566
EMBL:AAAB01008850 RefSeq:XP_311627.4 HSSP:P02833
ProteinModelPortal:O76762 SMR:O76762 EnsemblMetazoa:AGAP004662-RA
GeneID:1272718 KEGG:aga:AgaP_AGAP004662 VectorBase:AGAP004662
CTD:1272718 HOGENOM:HOG000231181 InParanoid:O76762 Uniprot:O76762
Length = 308
Score = 112 (44.5 bits), Expect = 0.00029, P = 0.00029
Identities = 33/100 (33%), Positives = 56/100 (56%)
Query: 98 GSPRKKLRLTKPQFATLE--DTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSK 155
G PR++ R T +F TLE F + L+ +++ +A L L RQ+++WFQNRR K
Sbjct: 135 GCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRM--K 192
Query: 156 LKQTEVECELLKRCCEKLKDENKRLQREVQELKSMKLSGA 195
LK+ EL R +++ ++ +R + E ++K+ L A
Sbjct: 193 LKK-----EL--RAVKEINEQARREREEQDKMKNESLKSA 225
>UNIPROTKB|E1BBE1 [details] [associations]
symbol:NKX2-2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060580 "ventral
spinal cord interneuron fate determination" evidence=IEA]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0048714 "positive
regulation of oligodendrocyte differentiation" evidence=IEA]
[GO:0048708 "astrocyte differentiation" evidence=IEA] [GO:0048665
"neuron fate specification" evidence=IEA] [GO:0048565 "digestive
tract development" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045666 "positive regulation of neuron differentiation"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0021530 "spinal cord oligodendrocyte
cell fate specification" evidence=IEA] [GO:0021522 "spinal cord
motor neuron differentiation" evidence=IEA] [GO:0014003
"oligodendrocyte development" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007224
"smoothened signaling pathway" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003329 "pancreatic PP cell fate commitment" evidence=IEA]
[GO:0003327 "type B pancreatic cell fate commitment" evidence=IEA]
[GO:0003326 "pancreatic A cell fate commitment" evidence=IEA]
[GO:0003323 "type B pancreatic cell development" evidence=IEA]
[GO:0001159 "core promoter proximal region DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0051091 GO:GO:0043565
GO:GO:0045944 GO:GO:0045665 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0003713 GO:GO:0021522 GO:GO:0048714 GO:GO:0045666
GO:GO:0048565 GO:GO:0007224 GO:GO:0048665 GO:GO:0014003
GO:GO:0021530 GO:GO:0003323 GO:GO:0048708
GeneTree:ENSGT00700000104098 GO:GO:0001159 GO:GO:0003326
GO:GO:0003329 CTD:4821 KO:K08029 OMA:GKPCHTL GO:GO:0003327
GO:GO:0060580 EMBL:DAAA02035818 IPI:IPI00694388
RefSeq:NP_001179638.1 UniGene:Bt.48094 Ensembl:ENSBTAT00000013574
GeneID:531695 KEGG:bta:531695 NextBio:20875510 Uniprot:E1BBE1
Length = 273
Score = 111 (44.1 bits), Expect = 0.00029, P = 0.00029
Identities = 23/71 (32%), Positives = 39/71 (54%)
Query: 95 DEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARS 154
D G ++++ +K Q LE F++ LS +++ LA + L P QV++WFQN R +
Sbjct: 124 DAGKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKM 183
Query: 155 KLKQTEVECEL 165
K + E E+
Sbjct: 184 KRARAEKGMEV 194
>UNIPROTKB|E2RNP4 [details] [associations]
symbol:NKX2-2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060580
"ventral spinal cord interneuron fate determination" evidence=IEA]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0048714 "positive
regulation of oligodendrocyte differentiation" evidence=IEA]
[GO:0048708 "astrocyte differentiation" evidence=IEA] [GO:0048665
"neuron fate specification" evidence=IEA] [GO:0048565 "digestive
tract development" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045666 "positive regulation of neuron differentiation"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0021530 "spinal cord oligodendrocyte
cell fate specification" evidence=IEA] [GO:0021522 "spinal cord
motor neuron differentiation" evidence=IEA] [GO:0014003
"oligodendrocyte development" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007224
"smoothened signaling pathway" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003329 "pancreatic PP cell fate commitment" evidence=IEA]
[GO:0003327 "type B pancreatic cell fate commitment" evidence=IEA]
[GO:0003326 "pancreatic A cell fate commitment" evidence=IEA]
[GO:0003323 "type B pancreatic cell development" evidence=IEA]
[GO:0001159 "core promoter proximal region DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0051091 GO:GO:0043565
GO:GO:0045944 GO:GO:0045665 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0003713 GO:GO:0021522 GO:GO:0048714 GO:GO:0045666
GO:GO:0048565 GO:GO:0007224 GO:GO:0048665 GO:GO:0014003
GO:GO:0021530 GO:GO:0003323 GO:GO:0048708
GeneTree:ENSGT00700000104098 GO:GO:0001159 GO:GO:0003326
GO:GO:0003329 CTD:4821 KO:K08029 OMA:GKPCHTL GO:GO:0003327
GO:GO:0060580 EMBL:AAEX03013746 RefSeq:XP_542867.2
ProteinModelPortal:E2RNP4 Ensembl:ENSCAFT00000008335 GeneID:485744
KEGG:cfa:485744 NextBio:20859672 Uniprot:E2RNP4
Length = 273
Score = 111 (44.1 bits), Expect = 0.00029, P = 0.00029
Identities = 23/71 (32%), Positives = 39/71 (54%)
Query: 95 DEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARS 154
D G ++++ +K Q LE F++ LS +++ LA + L P QV++WFQN R +
Sbjct: 124 DAGKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKM 183
Query: 155 KLKQTEVECEL 165
K + E E+
Sbjct: 184 KRARAEKGMEV 194
>UNIPROTKB|O95096 [details] [associations]
symbol:NKX2-2 "Homeobox protein Nkx-2.2" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003323 "type B pancreatic cell development" evidence=IEA]
[GO:0003326 "pancreatic A cell fate commitment" evidence=IEA]
[GO:0003327 "type B pancreatic cell fate commitment" evidence=IEA]
[GO:0003329 "pancreatic PP cell fate commitment" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0014003 "oligodendrocyte development"
evidence=IEA] [GO:0021522 "spinal cord motor neuron
differentiation" evidence=IEA] [GO:0021530 "spinal cord
oligodendrocyte cell fate specification" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IEA] [GO:0045666
"positive regulation of neuron differentiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048565 "digestive tract
development" evidence=IEA] [GO:0048665 "neuron fate specification"
evidence=IEA] [GO:0048708 "astrocyte differentiation" evidence=IEA]
[GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0060580 "ventral spinal cord
interneuron fate determination" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0001159 "core promoter proximal region
DNA binding" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0003713 "transcription coactivator activity"
evidence=ISS] [GO:0007420 "brain development" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0031018 "endocrine
pancreas development" evidence=TAS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 Reactome:REACT_111045 GO:GO:0005654
GO:GO:0007420 GO:GO:0051091 GO:GO:0043565 GO:GO:0045944
GO:GO:0045665 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0003713 GO:GO:0021522 GO:GO:0048714 GO:GO:0045666
GO:GO:0031018 GO:GO:0048565 GO:GO:0007224 GO:GO:0048665
GO:GO:0014003 GO:GO:0021530 GO:GO:0003323 GO:GO:0048708
eggNOG:NOG310976 HOGENOM:HOG000231923 GO:GO:0001159
HOVERGEN:HBG006689 GO:GO:0003326 GO:GO:0003329 EMBL:AF019415
EMBL:AF019414 EMBL:AL133325 EMBL:BC075092 EMBL:BC075093
IPI:IPI00028339 RefSeq:NP_002500.1 UniGene:Hs.516922
ProteinModelPortal:O95096 SMR:O95096 STRING:O95096 PRIDE:O95096
DNASU:4821 Ensembl:ENST00000377142 GeneID:4821 KEGG:hsa:4821
UCSC:uc002wsi.3 CTD:4821 GeneCards:GC20M021491 HGNC:HGNC:7835
HPA:HPA003468 MIM:604612 neXtProt:NX_O95096 PharmGKB:PA31642
InParanoid:O95096 KO:K08029 OMA:GKPCHTL OrthoDB:EOG4Z36FJ
PhylomeDB:O95096 ChiTaRS:NKX2-2 GenomeRNAi:4821 NextBio:18576
Bgee:O95096 CleanEx:HS_NKX2-2 Genevestigator:O95096
GermOnline:ENSG00000125820 GO:GO:0003327 GO:GO:0060580
Uniprot:O95096
Length = 273
Score = 111 (44.1 bits), Expect = 0.00029, P = 0.00029
Identities = 23/71 (32%), Positives = 39/71 (54%)
Query: 95 DEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARS 154
D G ++++ +K Q LE F++ LS +++ LA + L P QV++WFQN R +
Sbjct: 124 DAGKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKM 183
Query: 155 KLKQTEVECEL 165
K + E E+
Sbjct: 184 KRARAEKGMEV 194
>UNIPROTKB|I3LQZ1 [details] [associations]
symbol:NKX2-2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060580 "ventral
spinal cord interneuron fate determination" evidence=IEA]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0048714 "positive
regulation of oligodendrocyte differentiation" evidence=IEA]
[GO:0048708 "astrocyte differentiation" evidence=IEA] [GO:0048665
"neuron fate specification" evidence=IEA] [GO:0048565 "digestive
tract development" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045666 "positive regulation of neuron differentiation"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0021530 "spinal cord oligodendrocyte
cell fate specification" evidence=IEA] [GO:0021522 "spinal cord
motor neuron differentiation" evidence=IEA] [GO:0014003
"oligodendrocyte development" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007224
"smoothened signaling pathway" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003329 "pancreatic PP cell fate commitment" evidence=IEA]
[GO:0003327 "type B pancreatic cell fate commitment" evidence=IEA]
[GO:0003326 "pancreatic A cell fate commitment" evidence=IEA]
[GO:0003323 "type B pancreatic cell development" evidence=IEA]
[GO:0001159 "core promoter proximal region DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0051091 GO:GO:0043565
GO:GO:0045944 GO:GO:0045665 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0003713 GO:GO:0021522 GO:GO:0048714 GO:GO:0045666
GO:GO:0048565 GO:GO:0007224 GO:GO:0048665 GO:GO:0014003
GO:GO:0021530 GO:GO:0003323 GO:GO:0048708
GeneTree:ENSGT00700000104098 GO:GO:0001159 GO:GO:0003326
GO:GO:0003329 KO:K08029 OMA:GKPCHTL GO:GO:0003327 GO:GO:0060580
EMBL:FP565164 RefSeq:XP_003359963.1 Ensembl:ENSSSCT00000025131
GeneID:100626520 KEGG:ssc:100626520 Uniprot:I3LQZ1
Length = 273
Score = 111 (44.1 bits), Expect = 0.00029, P = 0.00029
Identities = 23/71 (32%), Positives = 39/71 (54%)
Query: 95 DEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARS 154
D G ++++ +K Q LE F++ LS +++ LA + L P QV++WFQN R +
Sbjct: 124 DAGKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKM 183
Query: 155 KLKQTEVECEL 165
K + E E+
Sbjct: 184 KRARAEKGMEV 194
>UNIPROTKB|P43697 [details] [associations]
symbol:NKX2-2 "Homeobox protein Nkx-2.2" species:10036
"Mesocricetus auratus" [GO:0001159 "core promoter proximal region
DNA binding" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0003713 "transcription coactivator activity"
evidence=ISS] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0051091 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0003713
GO:GO:0001159 HOVERGEN:HBG006689 EMBL:X81408 PIR:I48187
ProteinModelPortal:P43697 SMR:P43697 Uniprot:P43697
Length = 273
Score = 111 (44.1 bits), Expect = 0.00029, P = 0.00029
Identities = 23/71 (32%), Positives = 39/71 (54%)
Query: 95 DEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARS 154
D G ++++ +K Q LE F++ LS +++ LA + L P QV++WFQN R +
Sbjct: 124 DAGKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKM 183
Query: 155 KLKQTEVECEL 165
K + E E+
Sbjct: 184 KRARAEKGMEV 194
>MGI|MGI:97347 [details] [associations]
symbol:Nkx2-2 "NK2 transcription factor related, locus 2
(Drosophila)" species:10090 "Mus musculus" [GO:0001159 "core
promoter proximal region DNA binding" evidence=IDA] [GO:0003323
"type B pancreatic cell development" evidence=IDA;IMP] [GO:0003326
"pancreatic A cell fate commitment" evidence=IGI;IMP] [GO:0003327
"type B pancreatic cell fate commitment" evidence=IMP] [GO:0003329
"pancreatic PP cell fate commitment" evidence=IGI] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0003713
"transcription coactivator activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005622 "intracellular"
evidence=IDA] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0007224 "smoothened signaling pathway" evidence=IDA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IDA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0014003
"oligodendrocyte development" evidence=IMP] [GO:0021522 "spinal
cord motor neuron differentiation" evidence=IMP] [GO:0021529
"spinal cord oligodendrocyte cell differentiation"
evidence=IGI;IMP] [GO:0021530 "spinal cord oligodendrocyte cell
fate specification" evidence=IDA] [GO:0030154 "cell
differentiation" evidence=IMP] [GO:0031018 "endocrine pancreas
development" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0045595 "regulation of cell
differentiation" evidence=IMP] [GO:0045597 "positive regulation of
cell differentiation" evidence=IMP] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IMP;IDA] [GO:0045666
"positive regulation of neuron differentiation" evidence=IMP;IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0048468 "cell
development" evidence=IMP] [GO:0048565 "digestive tract
development" evidence=IMP] [GO:0048665 "neuron fate specification"
evidence=IGI] [GO:0048708 "astrocyte differentiation" evidence=IMP]
[GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0060580 "ventral spinal cord interneuron fate
determination" evidence=IMP] Reactome:REACT_13641
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
MGI:MGI:97347 GO:GO:0005654 GO:GO:0051091 GO:GO:0043565
GO:GO:0045944 GO:GO:0045665 GO:GO:0003700 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0003713 GO:GO:0021522 GO:GO:0048714
GO:GO:0045666 GO:GO:0048565 GO:GO:0007224 GO:GO:0048665
GO:GO:0014003 GO:GO:0021530 GO:GO:0003323 GO:GO:0048708
eggNOG:NOG310976 HOGENOM:HOG000231923 GO:GO:0001159
HOVERGEN:HBG006689 GO:GO:0003326 GO:GO:0003329 CTD:4821 KO:K08029
GO:GO:0003327 GO:GO:0060580 EMBL:U31566 EMBL:S83259 IPI:IPI00117502
PIR:JC4634 RefSeq:NP_035049.1 UniGene:Mm.330639
ProteinModelPortal:P42586 SMR:P42586 STRING:P42586 PRIDE:P42586
Ensembl:ENSMUST00000067075 GeneID:18088 KEGG:mmu:18088
InParanoid:P42586 NextBio:293225 Bgee:P42586 Genevestigator:P42586
GermOnline:ENSMUSG00000027434 Uniprot:P42586
Length = 273
Score = 111 (44.1 bits), Expect = 0.00029, P = 0.00029
Identities = 23/71 (32%), Positives = 39/71 (54%)
Query: 95 DEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARS 154
D G ++++ +K Q LE F++ LS +++ LA + L P QV++WFQN R +
Sbjct: 124 DAGKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKM 183
Query: 155 KLKQTEVECEL 165
K + E E+
Sbjct: 184 KRARAEKGMEV 194
>ZFIN|ZDB-GENE-050913-153 [details] [associations]
symbol:barhl2 "BarH-like 2" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-050913-153
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 HSSP:P10037
GeneTree:ENSGT00700000104206 KO:K09360 HOVERGEN:HBG050663
CTD:343472 OMA:ISVTMEH EMBL:BX004768 EMBL:AY145141 IPI:IPI00487796
RefSeq:NP_991303.1 UniGene:Dr.79590 SMR:Q6YI96 STRING:Q6YI96
Ensembl:ENSDART00000102661 GeneID:100001699 KEGG:dre:100001699
InParanoid:Q6YI96 NextBio:20785141 Uniprot:Q6YI96
Length = 364
Score = 113 (44.8 bits), Expect = 0.00030, P = 0.00030
Identities = 30/78 (38%), Positives = 40/78 (51%)
Query: 90 RDHHEDEGGSPRK-KLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQ 148
RD PRK + + Q LE +F+ LS + + LA LNL QV+ W+Q
Sbjct: 199 RDSPPVRSKKPRKARTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQ 258
Query: 149 NRRARSKLKQTEVECELL 166
NRR + K +QT V ELL
Sbjct: 259 NRRTKWK-RQTAVGLELL 275
>FB|FBgn0000492 [details] [associations]
symbol:Dr "Drop" species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0007450 "dorsal/ventral
pattern formation, imaginal disc" evidence=IMP] [GO:0007476
"imaginal disc-derived wing morphogenesis" evidence=IMP]
[GO:0042659 "regulation of cell fate specification" evidence=IMP]
[GO:0007419 "ventral cord development" evidence=NAS;TAS]
[GO:0007517 "muscle organ development" evidence=TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;NAS]
[GO:0009953 "dorsal/ventral pattern formation" evidence=TAS]
[GO:0007400 "neuroblast fate determination" evidence=TAS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0007420 "brain development" evidence=IMP;TAS] [GO:0007398
"ectoderm development" evidence=TAS] [GO:0007417 "central nervous
system development" evidence=NAS] [GO:0007389 "pattern
specification process" evidence=NAS] [GO:0035309 "wing and notum
subfield formation" evidence=IMP] [GO:0035222 "wing disc pattern
formation" evidence=IMP] [GO:0021782 "glial cell development"
evidence=IMP] [GO:0010629 "negative regulation of gene expression"
evidence=IMP] [GO:0007485 "imaginal disc-derived male genitalia
development" evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 EMBL:AE014297 GO:GO:0005634 GO:GO:0007420
GO:GO:0006355 GO:GO:0035222 GO:GO:0043565 GO:GO:0007419
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0007400 GO:GO:0007517 GO:GO:0010629
GO:GO:0007398 GO:GO:0007476 GO:GO:0042659 GO:GO:0007485
GO:GO:0007450 GO:GO:0035309 GeneTree:ENSGT00700000104129
GO:GO:0021782 eggNOG:NOG298790 KO:K09341 EMBL:X85331 EMBL:U33319
EMBL:AF009038 EMBL:AY069324 EMBL:M38582 PIR:PS0404 PIR:S55392
RefSeq:NP_477324.1 UniGene:Dm.1455 ProteinModelPortal:Q03372
SMR:Q03372 MINT:MINT-766314 STRING:Q03372 PRIDE:Q03372
EnsemblMetazoa:FBtr0085441 GeneID:45285 KEGG:dme:Dmel_CG1897
CTD:45285 FlyBase:FBgn0000492 InParanoid:Q03372 OMA:ANEPPRI
OrthoDB:EOG447D9Q PhylomeDB:Q03372 GenomeRNAi:45285 NextBio:837989
Bgee:Q03372 GermOnline:CG1897 Uniprot:Q03372
Length = 515
Score = 115 (45.5 bits), Expect = 0.00030, P = 0.00030
Identities = 26/66 (39%), Positives = 39/66 (59%)
Query: 100 PRKKLR--LTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSK-L 156
P +K R T Q +LE F+E LS ++ + L L QV++WFQNRRA++K L
Sbjct: 420 PNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLRLTETQVKIWFQNRRAKAKRL 479
Query: 157 KQTEVE 162
++ E+E
Sbjct: 480 QEAEIE 485
>MGI|MGI:106587 [details] [associations]
symbol:Msx3 "homeobox, msh-like 3" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IGI;IDA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0035067 "negative regulation of histone acetylation"
evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 MGI:MGI:106587
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0000976 GO:GO:0035067
GeneTree:ENSGT00700000104129 HOGENOM:HOG000231922
HOVERGEN:HBG005205 KO:K09341 EMBL:U62523 EMBL:AF060229
EMBL:BC051983 EMBL:X96518 EMBL:M38577 IPI:IPI00108205 PIR:PS0409
RefSeq:NP_034966.1 UniGene:Mm.4816 ProteinModelPortal:P70354
SMR:P70354 STRING:P70354 PRIDE:P70354 Ensembl:ENSMUST00000172775
GeneID:17703 KEGG:mmu:17703 CTD:17703 eggNOG:NOG237104
InParanoid:P70354 OMA:AAYGMYY OrthoDB:EOG4MPHRH NextBio:292302
Bgee:P70354 CleanEx:MM_MSX3 Genevestigator:P70354
GermOnline:ENSMUSG00000025469 Uniprot:P70354
Length = 204
Score = 108 (43.1 bits), Expect = 0.00030, P = 0.00030
Identities = 30/85 (35%), Positives = 42/85 (49%)
Query: 89 IRDHHEDEGGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQ 148
+R H + PR T Q LE F + LS ++ + L+L QV++WFQ
Sbjct: 81 LRKHKTNR--KPRTPF--TTAQLLALERKFHQKQYLSIAERAEFSSSLSLTETQVKIWFQ 136
Query: 149 NRRARSKLKQTEVECELLKRCCEKL 173
NRRA++K Q E E E LK + L
Sbjct: 137 NRRAKAKRLQ-EAELEKLKLAAKPL 160
>MGI|MGI:96174 [details] [associations]
symbol:Hoxa2 "homeobox A2" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0002076 "osteoblast development"
evidence=IGI] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007379 "segment specification" evidence=IMP] [GO:0007389
"pattern specification process" evidence=IMP] [GO:0008045 "motor
neuron axon guidance" evidence=IMP] [GO:0009952 "anterior/posterior
pattern specification" evidence=IMP] [GO:0009953 "dorsal/ventral
pattern formation" evidence=IGI;IMP] [GO:0021568 "rhombomere 2
development" evidence=IMP] [GO:0021569 "rhombomere 3 development"
evidence=IGI] [GO:0021658 "rhombomere 3 morphogenesis"
evidence=IMP] [GO:0035284 "brain segmentation" evidence=IMP]
[GO:0042474 "middle ear morphogenesis" evidence=IGI;IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0045165 "cell fate commitment" evidence=IMP] [GO:0045665
"negative regulation of neuron differentiation" evidence=IGI;IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0048703 "embryonic
viscerocranium morphogenesis" evidence=IMP] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IGI] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 MGI:MGI:96174 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0045944 GO:GO:0045665 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0008045 GO:GO:0002076
GO:GO:0007379 GO:GO:0009953 GO:GO:0001709 eggNOG:NOG321520
GO:GO:0035284 GO:GO:0048703 GO:GO:0042474 GO:GO:0021568
GeneTree:ENSGT00700000104446 KO:K09302 HOGENOM:HOG000063664
HOVERGEN:HBG006088 OrthoDB:EOG43TZVT CTD:3199 OMA:NCGSGLN
GO:GO:0021658 EMBL:M95599 EMBL:M93148 EMBL:M93292 EMBL:BC117105
EMBL:BC117107 EMBL:M87801 EMBL:AB039191 IPI:IPI00132242 PIR:A42694
PIR:A46037 RefSeq:NP_034581.1 UniGene:Mm.131
ProteinModelPortal:P31245 SMR:P31245 IntAct:P31245 STRING:P31245
PhosphoSite:P31245 PRIDE:P31245 Ensembl:ENSMUST00000014848
GeneID:15399 KEGG:mmu:15399 UCSC:uc009bxz.1 InParanoid:P31245
NextBio:288090 Bgee:P31245 CleanEx:MM_HOXA2 Genevestigator:P31245
GermOnline:ENSMUSG00000014704 Uniprot:P31245
Length = 372
Score = 113 (44.8 bits), Expect = 0.00031, P = 0.00031
Identities = 34/95 (35%), Positives = 50/95 (52%)
Query: 97 GGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKL 156
GGS R + T Q LE F + L ++ +A L+L RQV+VWFQNRR + K
Sbjct: 137 GGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHK- 195
Query: 157 KQTEVECELLKRCCEKLKD-ENKRLQREVQELKSM 190
+QT+ C+ + K K+ E+ E +E KS+
Sbjct: 196 RQTQ--CKENQNSEGKFKNLEDSDKVEEDEEEKSL 228
>RGD|2813 [details] [associations]
symbol:Hoxa2 "homeo box A2" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA polymerase
II promoter" evidence=ISO] [GO:0001709 "cell fate determination"
evidence=ISO] [GO:0002076 "osteoblast development" evidence=ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;TAS] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007379
"segment specification" evidence=ISO] [GO:0007389 "pattern
specification process" evidence=ISO] [GO:0008045 "motor neuron axon
guidance" evidence=ISO] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISO] [GO:0009953 "dorsal/ventral pattern
formation" evidence=ISO] [GO:0021568 "rhombomere 2 development"
evidence=ISO] [GO:0021569 "rhombomere 3 development" evidence=ISO]
[GO:0021658 "rhombomere 3 morphogenesis" evidence=ISO] [GO:0035284
"brain segmentation" evidence=ISO] [GO:0042474 "middle ear
morphogenesis" evidence=ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA;ISO] [GO:0045165 "cell fate commitment"
evidence=ISO] [GO:0045665 "negative regulation of neuron
differentiation" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0048703 "embryonic viscerocranium morphogenesis" evidence=ISO]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
RGD:2813 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
GO:GO:0045665 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0008045 GO:GO:0002076 GO:GO:0007379 GO:GO:0009953 GO:GO:0001709
eggNOG:NOG321520 GO:GO:0035284 GO:GO:0048703 GO:GO:0042474
GO:GO:0021568 KO:K09302 HOGENOM:HOG000063664 HOVERGEN:HBG006088
OrthoDB:EOG43TZVT CTD:3199 GO:GO:0021658 EMBL:M91802 IPI:IPI00210902
PIR:I52196 RefSeq:NP_036713.2 UniGene:Rn.91077
ProteinModelPortal:P31246 SMR:P31246 STRING:P31246 GeneID:24452
KEGG:rno:24452 UCSC:RGD:2813 InParanoid:P31246 NextBio:603363
Genevestigator:P31246 GermOnline:ENSRNOG00000005968 Uniprot:P31246
Length = 372
Score = 113 (44.8 bits), Expect = 0.00031, P = 0.00031
Identities = 34/95 (35%), Positives = 50/95 (52%)
Query: 97 GGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKL 156
GGS R + T Q LE F + L ++ +A L+L RQV+VWFQNRR + K
Sbjct: 137 GGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHK- 195
Query: 157 KQTEVECELLKRCCEKLKD-ENKRLQREVQELKSM 190
+QT+ C+ + K K+ E+ E +E KS+
Sbjct: 196 RQTQ--CKENQNSEGKFKNLEDSDKVEEDEEEKSL 228
>UNIPROTKB|P31246 [details] [associations]
symbol:Hoxa2 "Homeobox protein Hox-A2" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 RGD:2813 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0045944 GO:GO:0045665 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0008045 GO:GO:0002076 GO:GO:0007379
GO:GO:0009953 GO:GO:0001709 eggNOG:NOG321520 GO:GO:0035284
GO:GO:0048703 GO:GO:0042474 GO:GO:0021568 KO:K09302
HOGENOM:HOG000063664 HOVERGEN:HBG006088 OrthoDB:EOG43TZVT CTD:3199
GO:GO:0021658 EMBL:M91802 IPI:IPI00210902 PIR:I52196
RefSeq:NP_036713.2 UniGene:Rn.91077 ProteinModelPortal:P31246
SMR:P31246 STRING:P31246 GeneID:24452 KEGG:rno:24452 UCSC:RGD:2813
InParanoid:P31246 NextBio:603363 Genevestigator:P31246
GermOnline:ENSRNOG00000005968 Uniprot:P31246
Length = 372
Score = 113 (44.8 bits), Expect = 0.00031, P = 0.00031
Identities = 34/95 (35%), Positives = 50/95 (52%)
Query: 97 GGSPRKKLRLTKPQFATLEDTFKEHSTLSPKQKQGLAEKLNLRPRQVEVWFQNRRARSKL 156
GGS R + T Q LE F + L ++ +A L+L RQV+VWFQNRR + K
Sbjct: 137 GGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHK- 195
Query: 157 KQTEVECELLKRCCEKLKD-ENKRLQREVQELKSM 190
+QT+ C+ + K K+ E+ E +E KS+
Sbjct: 196 RQTQ--CKENQNSEGKFKNLEDSDKVEEDEEEKSL 228
WARNING: HSPs involving 119 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.131 0.379 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 260 214 0.00085 112 3 11 23 0.42 33
31 0.49 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 369
No. of states in DFA: 604 (64 KB)
Total size of DFA: 176 KB (2102 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.00u 0.10s 25.10t Elapsed: 00:00:02
Total cpu time: 25.02u 0.11s 25.13t Elapsed: 00:00:02
Start: Sat May 11 07:05:45 2013 End: Sat May 11 07:05:47 2013
WARNINGS ISSUED: 2