Query 024917
Match_columns 260
No_of_seqs 213 out of 2089
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 16:42:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024917.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024917hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2dy0_A APRT, adenine phosphori 100.0 6.1E-31 2.1E-35 225.7 20.8 166 77-242 14-188 (190)
2 1g2q_A Adenine phosphoribosylt 100.0 9E-31 3.1E-35 224.1 19.5 156 75-230 4-163 (187)
3 1qb7_A APRT, adenine phosphori 100.0 6.1E-31 2.1E-35 233.9 18.8 171 74-244 15-208 (236)
4 1zn8_A APRT, adenine phosphori 100.0 3.8E-30 1.3E-34 218.3 19.9 156 75-230 3-161 (180)
5 1l1q_A Adenine phosphoribosylt 100.0 1.1E-29 3.9E-34 217.3 18.4 155 76-230 3-160 (186)
6 1vch_A Phosphoribosyltransfera 99.9 1.9E-25 6.4E-30 188.1 13.7 160 81-242 8-173 (175)
7 1o57_A PUR operon repressor; p 99.9 5.3E-24 1.8E-28 194.9 19.5 165 74-244 84-255 (291)
8 1y0b_A Xanthine phosphoribosyl 99.9 2.4E-23 8.1E-28 178.7 20.5 175 75-253 5-193 (197)
9 3m3h_A OPRT, oprtase, orotate 99.9 2.1E-22 7.3E-27 179.3 14.3 139 90-242 46-199 (234)
10 3dez_A OPRT, oprtase, orotate 99.9 6E-22 2.1E-26 177.4 15.1 139 90-242 58-211 (243)
11 2yzk_A OPRT, oprtase, orotate 99.9 1.5E-21 5E-26 166.0 14.9 132 97-243 27-168 (178)
12 2wns_A Orotate phosphoribosylt 99.9 1.8E-21 6.1E-26 169.2 15.6 133 97-243 31-173 (205)
13 3qw4_B UMP synthase; N-termina 99.9 3.1E-21 1E-25 186.3 17.3 143 87-243 273-427 (453)
14 3mjd_A Orotate phosphoribosylt 99.9 2.6E-21 9E-26 172.2 15.5 118 97-230 51-177 (232)
15 2p1z_A Phosphoribosyltransfera 99.9 4.7E-21 1.6E-25 163.2 13.8 134 97-244 34-177 (180)
16 3n2l_A OPRT, oprtase, orotate 99.8 9.6E-21 3.3E-25 169.2 14.1 118 97-230 58-183 (238)
17 2ps1_A Orotate phosphoribosylt 99.8 1.1E-20 3.9E-25 166.3 14.2 119 97-230 37-166 (226)
18 1lh0_A OMP synthase; loop clos 99.8 3.1E-20 1.1E-24 162.3 13.7 118 97-230 33-158 (213)
19 3hvu_A Hypoxanthine phosphorib 99.8 4.4E-20 1.5E-24 161.3 14.2 142 87-238 16-170 (204)
20 2aee_A OPRT, oprtase, orotate 99.8 5.8E-20 2E-24 159.8 14.7 119 97-229 37-157 (211)
21 1fsg_A HGPRTASE, hypoxanthine- 99.8 2.9E-20 1E-24 164.7 9.8 152 88-239 32-197 (233)
22 3ozf_A Hypoxanthine-guanine-xa 99.8 1.9E-19 6.5E-24 161.8 10.0 148 91-238 49-210 (250)
23 1z7g_A HGPRT, HGPRTASE, hypoxa 99.8 7E-19 2.4E-23 154.2 11.4 144 87-240 17-182 (217)
24 1vdm_A Purine phosphoribosyltr 99.8 6E-18 2E-22 139.1 13.6 127 104-238 4-134 (153)
25 1hgx_A HGXPRTASE, hypoxanthine 99.8 4.8E-18 1.6E-22 144.3 12.0 130 99-238 8-150 (183)
26 2jbh_A Phosphoribosyltransfera 99.7 9.2E-18 3.2E-22 147.7 12.5 141 89-239 27-189 (225)
27 3o7m_A Hypoxanthine phosphorib 99.7 7.8E-17 2.7E-21 138.6 14.3 130 99-238 6-148 (186)
28 2geb_A Hypoxanthine-guanine ph 99.7 9.3E-17 3.2E-21 136.9 13.1 128 101-238 12-152 (185)
29 1a3c_A PYRR, pyrimidine operon 99.7 1.8E-16 6.1E-21 133.9 12.8 135 100-238 2-152 (181)
30 1pzm_A HGPRT, hypoxanthine-gua 99.7 2.3E-16 8E-21 137.6 13.7 132 99-239 21-173 (211)
31 1yfz_A Hypoxanthine-guanine ph 99.7 2.3E-16 7.9E-21 136.5 13.3 129 101-238 32-172 (205)
32 1nul_A XPRT, xanthine-guanine 99.7 2.4E-16 8.3E-21 130.7 11.4 119 104-238 5-127 (152)
33 1tc1_A Protein (hypoxanthine p 99.7 1.1E-15 3.7E-20 134.6 14.9 130 100-239 6-158 (220)
34 2ywu_A Hypoxanthine-guanine ph 99.6 2.9E-15 1E-19 128.1 14.2 126 104-238 12-149 (181)
35 3ohp_A Hypoxanthine phosphorib 99.6 4E-15 1.4E-19 126.8 14.7 127 103-238 6-145 (177)
36 1ufr_A TT1027, PYR mRNA-bindin 99.6 6.4E-15 2.2E-19 124.6 13.5 130 104-238 6-150 (181)
37 1wd5_A Hypothetical protein TT 99.6 5.2E-15 1.8E-19 128.1 12.5 128 110-240 9-177 (208)
38 2xbu_A Hypoxanthine-guanine ph 99.6 4.1E-14 1.4E-18 124.5 15.9 126 103-230 6-161 (221)
39 3lrt_A Ribose-phosphate pyroph 99.6 1.5E-14 5.2E-19 132.1 13.3 100 116-229 143-243 (286)
40 1w30_A PYRR bifunctional prote 99.6 2.3E-14 7.9E-19 124.1 13.6 131 102-238 13-166 (201)
41 1u9y_A RPPK;, ribose-phosphate 99.5 1.5E-13 5.2E-18 125.1 10.3 101 115-228 143-244 (284)
42 3s5j_B Ribose-phosphate pyroph 99.5 3E-13 1E-17 125.7 12.2 102 114-228 151-252 (326)
43 2ji4_A Phosphoribosyl pyrophos 99.5 1.8E-13 6.2E-18 129.4 10.7 115 114-228 179-311 (379)
44 1ecf_A Glutamine phosphoribosy 99.4 6E-13 2.1E-17 129.6 10.9 113 112-226 280-396 (504)
45 3acd_A Hypoxanthine-guanine ph 99.4 2.5E-12 8.7E-17 110.0 13.5 126 102-238 10-149 (181)
46 1dku_A Protein (phosphoribosyl 99.4 1.8E-12 6.1E-17 119.8 13.1 108 126-246 167-281 (317)
47 3dah_A Ribose-phosphate pyroph 99.4 9E-13 3.1E-17 122.1 10.3 90 126-228 166-255 (319)
48 1ao0_A Glutamine phosphoribosy 99.3 3.7E-12 1.3E-16 122.5 10.0 114 110-226 258-375 (459)
49 1dqn_A Guanine phosphoribosylt 99.3 6.6E-12 2.3E-16 111.3 8.4 113 102-230 32-154 (230)
50 1i5e_A Uracil phosphoribosyltr 98.8 7.5E-09 2.6E-13 90.1 8.2 93 127-230 71-165 (209)
51 1o5o_A Uracil phosphoribosyltr 98.7 3.3E-08 1.1E-12 87.2 9.5 91 129-230 85-177 (221)
52 2ehj_A Uracil phosphoribosyltr 98.7 1.7E-07 5.7E-12 81.9 11.2 89 129-230 72-164 (208)
53 2e55_A Uracil phosphoribosyltr 98.6 1.5E-07 5.3E-12 82.1 10.8 88 129-230 71-162 (208)
54 1v9s_A Uracil phosphoribosyltr 98.5 1.7E-07 5.7E-12 81.9 6.6 91 129-230 72-164 (208)
55 1bd3_D Uprtase, uracil phospho 98.5 4.3E-07 1.5E-11 81.1 8.7 89 129-230 105-199 (243)
56 3dmp_A Uracil phosphoribosyltr 98.3 9.5E-07 3.2E-11 77.6 7.5 88 129-230 80-172 (217)
57 1xtt_A Probable uracil phospho 98.2 5.5E-06 1.9E-10 72.6 8.8 94 129-230 74-174 (216)
58 3to5_A CHEY homolog; alpha(5)b 61.1 10 0.00035 29.6 4.6 33 187-222 10-42 (134)
59 3lkv_A Uncharacterized conserv 56.4 36 0.0012 29.4 7.8 141 74-222 22-175 (302)
60 4hwg_A UDP-N-acetylglucosamine 45.1 38 0.0013 30.9 6.3 48 108-155 76-123 (385)
61 3f6p_A Transcriptional regulat 44.8 31 0.0011 24.7 4.7 29 189-220 2-30 (120)
62 3ia7_A CALG4; glycosysltransfe 44.3 54 0.0019 28.5 7.0 42 114-156 90-131 (402)
63 3eod_A Protein HNR; response r 43.7 34 0.0012 24.6 4.8 31 188-221 6-36 (130)
64 3gl9_A Response regulator; bet 43.2 34 0.0012 24.6 4.7 28 190-220 3-30 (122)
65 3rsc_A CALG2; TDP, enediyne, s 42.7 53 0.0018 28.9 6.8 42 114-156 106-147 (415)
66 1r6j_A Syntenin 1; PDZ, membra 41.8 24 0.00082 25.4 3.6 37 185-221 40-76 (82)
67 3h5i_A Response regulator/sens 39.4 38 0.0013 24.8 4.5 30 188-220 4-33 (140)
68 1tmy_A CHEY protein, TMY; chem 37.8 52 0.0018 23.1 4.9 30 189-221 2-31 (120)
69 3s2u_A UDP-N-acetylglucosamine 37.3 66 0.0022 28.6 6.5 36 120-155 86-121 (365)
70 3lte_A Response regulator; str 36.7 46 0.0016 23.8 4.5 30 188-220 5-34 (132)
71 1u9y_A RPPK;, ribose-phosphate 36.6 1.2E+02 0.0043 26.5 8.1 72 137-222 9-83 (284)
72 3mm4_A Histidine kinase homolo 35.3 52 0.0018 26.4 5.1 29 187-218 59-87 (206)
73 2iya_A OLEI, oleandomycin glyc 33.9 79 0.0027 28.1 6.5 41 114-156 97-137 (424)
74 1dcf_A ETR1 protein; beta-alph 33.5 61 0.0021 23.4 4.8 30 188-220 6-35 (136)
75 3otg_A CALG1; calicheamicin, T 33.4 64 0.0022 28.2 5.7 38 116-155 120-157 (412)
76 2j48_A Two-component sensor ki 33.3 65 0.0022 22.0 4.7 29 189-220 1-29 (119)
77 1i16_A Interleukin 16, LCF; cy 32.9 50 0.0017 25.1 4.4 39 185-223 75-113 (130)
78 2iyf_A OLED, oleandomycin glyc 32.5 1E+02 0.0034 27.3 6.9 41 114-156 92-132 (430)
79 3gt7_A Sensor protein; structu 32.1 60 0.0021 24.3 4.7 29 188-219 6-34 (154)
80 2le3_A Carnitine O-palmitoyltr 32.1 14 0.00049 23.9 0.8 12 247-258 10-21 (42)
81 3lrt_A Ribose-phosphate pyroph 32.0 1E+02 0.0035 27.3 6.8 71 137-223 9-83 (286)
82 3hdv_A Response regulator; PSI 31.9 66 0.0022 23.1 4.7 31 188-221 6-36 (136)
83 3hix_A ALR3790 protein; rhodan 31.7 49 0.0017 24.0 4.0 33 186-221 49-81 (106)
84 3hzh_A Chemotaxis response reg 31.0 63 0.0021 24.3 4.6 29 189-220 36-64 (157)
85 4fzr_A SSFS6; structural genom 31.0 76 0.0026 27.8 5.8 38 116-155 113-150 (398)
86 3gge_A PDZ domain-containing p 30.7 65 0.0022 24.0 4.5 44 184-227 45-88 (95)
87 2p6p_A Glycosyl transferase; X 30.4 81 0.0028 27.4 5.9 38 116-155 97-134 (384)
88 3m6m_D Sensory/regulatory prot 30.2 56 0.0019 24.2 4.2 30 188-220 13-42 (143)
89 3dah_A Ribose-phosphate pyroph 30.1 2.8E+02 0.0095 24.9 9.5 75 135-223 14-92 (319)
90 2yjn_A ERYCIII, glycosyltransf 30.1 58 0.002 29.3 4.9 34 120-155 138-171 (441)
91 3t6k_A Response regulator rece 30.0 75 0.0026 23.1 4.8 29 189-220 4-32 (136)
92 1wi4_A Synip, syntaxin binding 29.6 49 0.0017 24.4 3.6 39 185-223 59-100 (109)
93 3h1g_A Chemotaxis protein CHEY 29.5 60 0.0021 23.3 4.2 29 188-219 4-32 (129)
94 4dad_A Putative pilus assembly 29.4 48 0.0016 24.3 3.6 32 187-221 18-50 (146)
95 3grc_A Sensor protein, kinase; 29.3 78 0.0027 22.8 4.8 29 188-219 5-33 (140)
96 3dzc_A UDP-N-acetylglucosamine 27.9 92 0.0032 28.0 5.9 44 112-155 97-141 (396)
97 2ayx_A Sensor kinase protein R 27.9 37 0.0013 28.5 3.0 32 187-221 9-40 (254)
98 3foj_A Uncharacterized protein 27.3 1.1E+02 0.0038 21.6 5.2 30 185-217 52-81 (100)
99 3kyj_B CHEY6 protein, putative 26.9 57 0.002 23.9 3.7 30 188-220 12-42 (145)
100 3kto_A Response regulator rece 26.8 71 0.0024 23.1 4.2 29 189-220 6-34 (136)
101 3ot5_A UDP-N-acetylglucosamine 26.8 99 0.0034 28.0 5.9 45 111-155 99-144 (403)
102 3i42_A Response regulator rece 26.7 64 0.0022 22.9 3.8 27 190-219 4-30 (127)
103 3ilm_A ALR3790 protein; rhodan 26.3 61 0.0021 25.0 3.8 33 186-221 53-85 (141)
104 2jtq_A Phage shock protein E; 25.8 97 0.0033 21.2 4.5 32 187-221 39-70 (85)
105 1k68_A Phytochrome response re 25.7 1E+02 0.0035 21.8 4.8 26 189-217 2-27 (140)
106 3eul_A Possible nitrate/nitrit 25.4 57 0.002 24.1 3.4 28 187-217 13-40 (152)
107 2b4a_A BH3024; flavodoxin-like 25.2 1E+02 0.0036 22.1 4.8 30 187-219 13-42 (138)
108 1o97_C Electron transferring f 25.1 81 0.0028 27.5 4.8 45 106-153 95-143 (264)
109 3gk5_A Uncharacterized rhodane 23.6 1.1E+02 0.0036 22.2 4.6 30 185-217 51-80 (108)
110 1mvo_A PHOP response regulator 23.2 1.1E+02 0.0039 21.7 4.7 28 189-219 3-30 (136)
111 1efv_B Electron transfer flavo 23.2 93 0.0032 27.0 4.8 45 106-153 99-147 (255)
112 3fet_A Electron transfer flavo 23.2 1.4E+02 0.0047 24.1 5.5 40 112-153 57-97 (166)
113 3tsa_A SPNG, NDP-rhamnosyltran 23.1 1.3E+02 0.0045 26.1 5.8 39 115-155 103-141 (391)
114 3snk_A Response regulator CHEY 22.9 81 0.0028 22.7 3.8 30 188-220 13-43 (135)
115 3o46_A Maguk P55 subfamily mem 22.8 92 0.0031 21.8 3.9 32 186-217 47-78 (93)
116 2rjn_A Response regulator rece 22.5 1.2E+02 0.0041 22.3 4.8 30 188-220 6-35 (154)
117 2a9o_A Response regulator; ess 22.5 1.2E+02 0.0041 20.9 4.5 28 190-220 2-29 (120)
118 3hv2_A Response regulator/HD d 22.5 1.1E+02 0.0036 22.7 4.5 31 187-220 12-42 (153)
119 3cg4_A Response regulator rece 22.3 1.3E+02 0.0044 21.6 4.8 29 188-219 6-34 (142)
120 3s5j_B Ribose-phosphate pyroph 22.3 3.1E+02 0.011 24.7 8.3 75 135-223 10-88 (326)
121 1jbe_A Chemotaxis protein CHEY 22.2 1.1E+02 0.0038 21.5 4.4 26 189-217 4-29 (128)
122 2r44_A Uncharacterized protein 22.1 3.7E+02 0.013 22.9 10.7 104 105-215 30-136 (331)
123 3e17_A Tight junction protein 21.9 83 0.0028 22.0 3.5 33 186-218 40-72 (88)
124 3rqi_A Response regulator prot 21.9 1.1E+02 0.0039 23.6 4.7 29 188-219 6-34 (184)
125 1f0k_A MURG, UDP-N-acetylgluco 21.6 1.9E+02 0.0064 24.6 6.4 40 116-155 86-125 (364)
126 3lua_A Response regulator rece 21.6 1.4E+02 0.0047 21.5 4.9 30 188-220 3-33 (140)
127 2d92_A INAD-like protein; PDZ 21.4 1.2E+02 0.0042 21.9 4.5 36 186-221 63-98 (108)
128 3ih5_A Electron transfer flavo 21.3 90 0.0031 26.3 4.2 45 106-153 74-119 (217)
129 1efp_B ETF, protein (electron 21.3 90 0.0031 27.0 4.2 45 106-153 96-144 (252)
130 3f6c_A Positive transcription 21.2 1.1E+02 0.0037 21.8 4.2 27 191-220 3-29 (134)
131 3oti_A CALG3; calicheamicin, T 21.2 85 0.0029 27.6 4.2 39 115-155 119-157 (398)
132 1gmx_A GLPE protein; transfera 21.2 68 0.0023 23.1 3.0 33 186-221 55-87 (108)
133 1srr_A SPO0F, sporulation resp 21.1 1.4E+02 0.0047 20.9 4.7 27 190-219 4-30 (124)
134 3r68_A Na(+)/H(+) exchange reg 20.9 91 0.0031 21.7 3.6 36 186-221 47-82 (95)
135 3iwh_A Rhodanese-like domain p 20.9 1.2E+02 0.004 22.1 4.3 33 185-220 52-84 (103)
136 3jte_A Response regulator rece 20.8 1.2E+02 0.0041 21.9 4.4 28 190-220 4-31 (143)
137 3n0r_A Response regulator; sig 20.8 1.2E+02 0.0041 26.1 5.0 31 188-221 159-189 (286)
138 3td9_A Branched chain amino ac 20.7 2.6E+02 0.0088 23.8 7.2 111 106-223 64-185 (366)
139 3a10_A Response regulator; pho 20.1 1.4E+02 0.0049 20.4 4.5 26 191-219 3-28 (116)
No 1
>2dy0_A APRT, adenine phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.25A {Escherichia coli K12}
Probab=99.98 E-value=6.1e-31 Score=225.66 Aligned_cols=166 Identities=46% Similarity=0.813 Sum_probs=148.7
Q ss_pred HHHHHhccccccCCCCCCCceEEechhhccCHHHHHHHHHHHHHHHhcCCccEEEeecCchhhhHHHHHHHhCCCEEEEe
Q 024917 77 RIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMR 156 (260)
Q Consensus 77 ~~~~l~~~iR~~p~fp~~Gi~f~Di~~ll~dp~~~~~l~~~La~~i~~~~iDvVVgve~rG~~lA~~LA~~Lgvp~v~iR 156 (260)
..+.|++.+|.+|+||++|+.|+|+..++.+++.++.+++.+++.+.+.++|+|++++.|||++|..+|+.+|+|++++|
T Consensus 14 ~~~~l~~~i~~~p~~~~~g~~~~d~~~~~~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~rG~~~a~~la~~l~~p~~~~r 93 (190)
T 2dy0_A 14 QLEYLKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVR 93 (190)
T ss_dssp HHHHHHHHSEEETTCSSTTCCEEETHHHHHCHHHHHHHHHHHHHHHTTTTCCEEEEETTHHHHHHHHHHHHHTCEEEEEB
T ss_pred HHHHHHHHHhhCCCCCCCCeEEEeChhhhcCHHHHHHHHHHHHHHhccCCCCEEEEECcccHHHHHHHHHHHCCCEEEEE
Confidence 35679999999999999999999999999999999999999999998778999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeecccceeEEEEecccCCCCeEEEEeeeccchHHHHHHHHHHHhCCCcEEEEEEEEecCcc-----
Q 024917 157 KPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNAC----- 231 (260)
Q Consensus 157 K~~kl~~~~~s~~y~~e~g~~~lel~~~~i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~~avlve~~~~----- 231 (260)
|.++.++.+++..|+.+|+.+.+++..+.+.+|++|||||||+|||+|+.+++++|+++|++++++++++++++.
T Consensus 94 k~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~gk~VLlVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~~~~~~ 173 (190)
T 2dy0_A 94 KPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQR 173 (190)
T ss_dssp STTCCCSCEEEEEEEETTEEEEEEEEGGGCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEEEGGGCHHHH
T ss_pred ecCCCCcccccceehhhcCceEEEEeccccCCcCEEEEEEccccchHHHHHHHHHHHHcCCEEEEEEEEEEccCcchHHH
Confidence 988888888888888888877788776666699999999999999999999999999999999999999999741
Q ss_pred ----CcceEEeeeee
Q 024917 232 ----FSSYILLFSYA 242 (260)
Q Consensus 232 ----~~e~~~L~~~~ 242 (260)
..++++|+.++
T Consensus 174 l~~~g~~v~sl~~~~ 188 (190)
T 2dy0_A 174 LEKQGITSYSLVPFP 188 (190)
T ss_dssp HHTTTCEEEEEEEEC
T ss_pred HhhCCCcEEEEEEec
Confidence 33666666653
No 2
>1g2q_A Adenine phosphoribosyltransferase 1; dimer, single domain, catalytic loop; 1.50A {Saccharomyces cerevisiae} SCOP: c.61.1.1 PDB: 1g2p_A
Probab=99.97 E-value=9e-31 Score=224.09 Aligned_cols=156 Identities=36% Similarity=0.689 Sum_probs=143.9
Q ss_pred chHHHHHhccccccCCCCCCCceEEechhhccCHHHHHHHHHHHHHHHhc----CCccEEEeecCchhhhHHHHHHHhCC
Q 024917 75 DPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKD----KNISVVAGIEARGFIFGPPIALAIGA 150 (260)
Q Consensus 75 ~~~~~~l~~~iR~~p~fp~~Gi~f~Di~~ll~dp~~~~~l~~~La~~i~~----~~iDvVVgve~rG~~lA~~LA~~Lgv 150 (260)
+++.+.|++.+|.+|+||++|+.|+|+..++.+++.++.+++.|++++.+ .++|+|+|++.|||++|..+|+.+|+
T Consensus 4 ~~~~~~l~~~~~~~~~~p~~g~~~~d~~~~l~~~~~~~~~~~~La~~i~~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~~ 83 (187)
T 1g2q_A 4 ASYAQELKLALHQYPNFPSEGILFEDFLPIFRNPGLFQKLIDAFKLHLEEAFPEVKIDYIVGLESRGFLFGPTLALALGV 83 (187)
T ss_dssp HHHHHHHHHHCEEETTCSSTTCCEEECHHHHHSHHHHHHHHHHHHHHHHHHCTTSCCCEEEEETTTHHHHHHHHHHHHTC
T ss_pred hHHHHHHHHhcccCCCCCCCCEEEEehHhhhcCHHHHHHHHHHHHHHHhhhcccCCCCEEEEEccCcHHHHHHHHHHHCC
Confidence 56778899999999999999999999999999999999999999998875 57999999999999999999999999
Q ss_pred CEEEEecCCCCCCceeeeeeeecccceeEEEEecccCCCCeEEEEeeeccchHHHHHHHHHHHhCCCcEEEEEEEEecCc
Q 024917 151 KFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNA 230 (260)
Q Consensus 151 p~v~iRK~~kl~~~~~s~~y~~e~g~~~lel~~~~i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~~avlve~~~ 230 (260)
|+.++||.++.++.+.+.+|+.+++.+.+++..+...+|++|||||||+|||+|+.+++++|+++|++++++++++++++
T Consensus 84 p~~~~rk~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~~ 163 (187)
T 1g2q_A 84 GFVPVRKAGKLPGECFKATYEKEYGSDLFEIQKNAIPAGSNVIIVDDIIATGGSAAAAGELVEQLEANLLEYNFVMELDF 163 (187)
T ss_dssp EEEEEEETTCSCSSEEEEEEECSSCEEEEEEETTSSCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEECCC
T ss_pred CEEEEEEeCCCCcceecHHHHHHhCCCcEEEecccCCCcCEEEEECCCcccHHHHHHHHHHHHHcCCeEEEEEEEEEccC
Confidence 99888998877887888888888887788887666668999999999999999999999999999999999999999986
No 3
>1qb7_A APRT, adenine phosphoribosyltransferase; dinucleotide binding fold; HET: ADE CIT; 1.50A {Leishmania donovani} SCOP: c.61.1.1 PDB: 1qb8_A* 1qcc_A* 1qcd_A 1mzv_A*
Probab=99.97 E-value=6.1e-31 Score=233.91 Aligned_cols=171 Identities=29% Similarity=0.505 Sum_probs=154.3
Q ss_pred cchHHHHHhcccccc-CCCCCCCc-eEEechhhccCHHHHHHHHHHHHHHHhcC--CccEEEeecCchhhhHHHHHHHhC
Q 024917 74 QDPRIAGISSAIRVI-PDFPKPGI-MFQDITTLLLDTKAFRDTIDLFVERYKDK--NISVVAGIEARGFIFGPPIALAIG 149 (260)
Q Consensus 74 ~~~~~~~l~~~iR~~-p~fp~~Gi-~f~Di~~ll~dp~~~~~l~~~La~~i~~~--~iDvVVgve~rG~~lA~~LA~~Lg 149 (260)
-+++.+.|++.||++ |+||++|+ .|+|++.++.+|+.++.+++.|++.+.+. ++|+|+|++.|||++|..+|+.+|
T Consensus 15 ~~~~~~~l~~~i~~~~~dfp~~gip~~~D~~~ll~~~~~~~~~~~~la~~i~~~~~~~d~Ivgv~~gG~~~a~~lA~~L~ 94 (236)
T 1qb7_A 15 SHALSQLLKKSYRWYSPVFSPRNVPRFADVSSITESPETLKAIRDFLVQRYRAMSPAPTHILGFDARGFLFGPMIAVELE 94 (236)
T ss_dssp TSHHHHHHHHHCCEECGGGSSSCSSSEECTHHHHTCHHHHHHHHHHHHHHHHHCSSCCSEEEEETTGGGGTHHHHHHHHT
T ss_pred ChHHHHHHHHHhcccCCCCCCCCCEeEEEhHhhcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEECcCcHHHHHHHHHHhC
Confidence 467788999999999 99999999 99999999999999999999999999876 799999999999999999999999
Q ss_pred CCEEEEecCCCCCCcee-eeeeeecc---cceeEEEEecccCCCCeEEEEeeeccchHHHHHHHHHHHhCCCcEEEEEEE
Q 024917 150 AKFVPMRKPKKLPGEVI-SEEYSLEY---GKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICI 225 (260)
Q Consensus 150 vp~v~iRK~~kl~~~~~-s~~y~~e~---g~~~lel~~~~i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~~avl 225 (260)
+|++++||.++.++.+. +.+|..+| +.+.++++.+.+.+|++||||||++|||+|+.+++++|+++|+++++++++
T Consensus 95 ~p~~~~rk~~k~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~~v~v~~l 174 (236)
T 1qb7_A 95 IPFVLMRKADKNAGLLIRSEPYEKEYKEAAPEVMTIRYGSIGKGSRVVLIDDVLATGGTALSGLQLVEASDAVVVEMVSI 174 (236)
T ss_dssp CCEEEEBCGGGCCSSEEECCCCCCCTTSCCCCCCEEETTSSCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCEEEEEEecCCCCcceeceeccchhhhcCcceEEEecCCCCCcCEEEEEecccccHHHHHHHHHHHHHcCCeEEEEEEE
Confidence 99999999888888777 77777777 566788877776799999999999999999999999999999999999999
Q ss_pred EecCcc---------------CcceEEeeeeecc
Q 024917 226 QMLNAC---------------FSSYILLFSYATN 244 (260)
Q Consensus 226 ve~~~~---------------~~e~~~L~~~~~~ 244 (260)
+++... ..++.+|+.+++.
T Consensus 175 ~~~~~~~g~~~l~~~~~~~~~g~~v~sl~~~~~~ 208 (236)
T 1qb7_A 175 LSIPFLKAAEKIHSTANSRYKDIKFISLLSDDAL 208 (236)
T ss_dssp EECGGGCHHHHHHHHHHHTTTTCCEEEEEEGGGC
T ss_pred EEcccccHHHHHhhhcccccCCCcEEEEEEcccc
Confidence 999751 3578888888764
No 4
>1zn8_A APRT, adenine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: AMP; 1.76A {Homo sapiens} SCOP: c.61.1.1 PDB: 1ore_A* 1zn7_A* 1zn9_A*
Probab=99.97 E-value=3.8e-30 Score=218.29 Aligned_cols=156 Identities=41% Similarity=0.772 Sum_probs=141.5
Q ss_pred chHHHHHhccccccCCCCCCCceEEechhhccCHHHHHHHHHHHHHHHhcC---CccEEEeecCchhhhHHHHHHHhCCC
Q 024917 75 DPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDK---NISVVAGIEARGFIFGPPIALAIGAK 151 (260)
Q Consensus 75 ~~~~~~l~~~iR~~p~fp~~Gi~f~Di~~ll~dp~~~~~l~~~La~~i~~~---~iDvVVgve~rG~~lA~~LA~~Lgvp 151 (260)
++..+.|.+.||.+|+||++|+.|+|+..++.+|+..+.+++.|++.+.+. ++|+|++++.||+++|..+|+.+|+|
T Consensus 3 ~~~~~~l~~~i~~~~~~p~~g~~~~d~~~~l~~~~~~~~la~~l~~~~~~~~~~~~d~vv~v~~~G~~~a~~la~~l~~p 82 (180)
T 1zn8_A 3 DSELQLVEQRIRSFPDFPTPGVVFRDISPVLKDPASFRAAIGLLARHLKATHGGRIDYIAGLDSRGFLFGPSLAQELGLG 82 (180)
T ss_dssp CHHHHHHHTTCEEEETCSSTTCEEEECHHHHHSHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTTHHHHHHHHHHHHTCE
T ss_pred hHHHHHHHHHHhcCCCCCcCCeEEEecHHHhcCHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHhCCC
Confidence 456677999999999999999999999999999999999999999988653 38999999999999999999999999
Q ss_pred EEEEecCCCCCCceeeeeeeecccceeEEEEecccCCCCeEEEEeeeccchHHHHHHHHHHHhCCCcEEEEEEEEecCc
Q 024917 152 FVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNA 230 (260)
Q Consensus 152 ~v~iRK~~kl~~~~~s~~y~~e~g~~~lel~~~~i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~~avlve~~~ 230 (260)
++++||.++.++...+..++.+++.+.+++..+...+|++||||||++|||+|+.+++++|+++|++++.+++++++..
T Consensus 83 ~~~~r~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~~ 161 (180)
T 1zn8_A 83 CVLIRKRGKLPGPTLWASYSLEYGKAELEIQKDALEPGQRVVVVDDLLATGGTMNAACELLGRLQAEVLECVSLVELTS 161 (180)
T ss_dssp EEEEEETTCCCSSEEEEEEEETTEEEEEEEETTSSCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEEEGG
T ss_pred EEEEEecCCCCcccccHHHHHhcCccEEEEeccccCCCCEEEEEcCCcccHHHHHHHHHHHHHcCCEEEEEEEEEEccC
Confidence 9888988777777778888877777778877665568999999999999999999999999999999999999999975
No 5
>1l1q_A Adenine phosphoribosyltransferase; aprtase, giardia lamblia, purine metabolism, cataly transferase; HET: 9DA; 1.85A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1l1r_A*
Probab=99.97 E-value=1.1e-29 Score=217.28 Aligned_cols=155 Identities=35% Similarity=0.577 Sum_probs=140.0
Q ss_pred hHHHHHhccccccCCCCCCCceEEechhhccCHHHHHHHHHHHHHHHhcCCccEEEeecCchhhhHHHHHHHhCCCEEEE
Q 024917 76 PRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPM 155 (260)
Q Consensus 76 ~~~~~l~~~iR~~p~fp~~Gi~f~Di~~ll~dp~~~~~l~~~La~~i~~~~iDvVVgve~rG~~lA~~LA~~Lgvp~v~i 155 (260)
+..+.|++.+|.+|+||++|+.|.|+..++.+++.++.+++.+++.+.+.++|+|++++.|||++|..+|+.+|+|+++.
T Consensus 3 ~~~~~l~~~~~~~p~~p~~g~~~~d~~~~l~~~~~~~~l~~~la~~~~~~~~d~Iv~vp~rG~~~A~~la~~l~~p~~~~ 82 (186)
T 1l1q_A 3 MSVADAHALIKTIPDFPTKGIAFKDLSDILSTPAALDAVRKEVTAHYKDVPITKVVGIESRGFILGGIVANSLGVGFVAL 82 (186)
T ss_dssp CCHHHHHHTCEEETTCSSTTCCEEECHHHHTCHHHHHHHHHHHHHHTTTSCCCEEEEESGGGHHHHHHHHHHHTCEEEEE
T ss_pred hhHHHHHhhhccCCCCCCCCeEEEEhHHHhCCHHHHHHHHHHHHHHhhccCCCEEEEcCcccHHHHHHHHHHhCCCEEEE
Confidence 45667999999999999999999999999999999999999999988766789999999999999999999999999999
Q ss_pred ecCCCCCCceeeeeeeecccce-eEEEEecccCCCCeEEEEeeeccchHHHHHHHHHHHhCCCc--EEEEEEEEecCc
Q 024917 156 RKPKKLPGEVISEEYSLEYGKD-VMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNH--IFILICIQMLNA 230 (260)
Q Consensus 156 RK~~kl~~~~~s~~y~~e~g~~-~lel~~~~i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~--vV~~avlve~~~ 230 (260)
||.++.++.+.+.+|+.+++.. .+++..+.+.+|++|||||||+|||+|+.+++++|+++|++ +++++++++++.
T Consensus 83 rk~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~gk~VLLVDDVitTG~Tl~aa~~~L~~~Ga~~~~V~~~~l~~k~~ 160 (186)
T 1l1q_A 83 RKAGKLPGDVCKCTFDMEYQKGVTIEVQKRQLGPHDVVLLHDDVLATGGTLLAAIELCETAGVKPENIYINVLYEIEA 160 (186)
T ss_dssp EETTSSCSSEEEEEEEETTEEEEEEEEEGGGCCTTCCEEEEEEEESSSHHHHHHHHHHHHTTCCGGGEEEEEEEECGG
T ss_pred EecCCCCCceechhhhhhcCcceEEEEecccCCCcCEEEEEecccccHHHHHHHHHHHHHcCCCcceEEEEEEEEccC
Confidence 9888777777777776666654 57776665568999999999999999999999999999999 999999999975
No 6
>1vch_A Phosphoribosyltransferase-related protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.94A {Thermus thermophilus} SCOP: c.61.1.1
Probab=99.93 E-value=1.9e-25 Score=188.11 Aligned_cols=160 Identities=16% Similarity=0.195 Sum_probs=131.7
Q ss_pred HhccccccCCCCCC-CceEEechhhccCHHHHHHHHHHHHHHHhcCCccEEEeecCchhhhHHHHHHHhCCCEEEEecCC
Q 024917 81 ISSAIRVIPDFPKP-GIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPK 159 (260)
Q Consensus 81 l~~~iR~~p~fp~~-Gi~f~Di~~ll~dp~~~~~l~~~La~~i~~~~iDvVVgve~rG~~lA~~LA~~Lgvp~v~iRK~~ 159 (260)
|++.+|.+|+||.+ |+ |++...+..+++..+.+++.+++.+.+ ++|+|+|++.||+++|..+|+.+|+|+++.||.+
T Consensus 8 ~~~~~~~~~~~~~~~g~-~i~~~k~~~~~~~~~~~~~~la~~~~~-~~d~Iv~v~~gg~~~a~~la~~l~~p~~~~rk~~ 85 (175)
T 1vch_A 8 VGGVTRHVPLIEPLPGR-RIPLVEFLGDPEFTRAAAEALRPLVPK-EAEILFTTETSPIPLTHVLAEALGLPYVVARRRR 85 (175)
T ss_dssp ETTEEEEECEEEEETTE-EEECCCCTTCHHHHHHHHHHHGGGSCT-TCCEEEEESSTHHHHHHHHHHHHTCCEEEEBSSC
T ss_pred ecceeeEcCceEcCCCc-EEEeeeccCCHHHHHHHHHHHHHHhcc-CCCEEEEeCCcChHHHHHHHHHhCCCEEEEEecC
Confidence 78899999999977 65 699999999999999999999988876 7899999999999999999999999998888876
Q ss_pred CC--CCceeeeeeeeccc-ceeEEEEeccc--CCCCeEEEEeeeccchHHHHHHHHHHHhCCCcEEEEEEEEecCccCcc
Q 024917 160 KL--PGEVISEEYSLEYG-KDVMEMHVGAV--QAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNACFSS 234 (260)
Q Consensus 160 kl--~~~~~s~~y~~e~g-~~~lel~~~~i--~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~~avlve~~~~~~e 234 (260)
+. +.......+...++ .+.+++..+.+ .+|++|||||||+|||+|+.+++++|+++|+++++++++++++....+
T Consensus 86 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~v~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~V~~~~l~~~~~~~~~ 165 (175)
T 1vch_A 86 RPYMEDPIIQEVQTLTLGVGEVLWLDRRFAEKLLNQRVVLVSDVVASGETMRAMEKMVLRAGGHVVARLAVFRQGTPGLA 165 (175)
T ss_dssp CTTCCSCEEEECCC------CEEEECHHHHHHHTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECSCCSSC
T ss_pred CCCCCcceeeeeeccccCCceEEEEecccccccCCCEEEEEeccccchHHHHHHHHHHHHcCCeEEEEEEEEecCCCCcc
Confidence 53 23222222221122 23455544333 389999999999999999999999999999999999999999988889
Q ss_pred eEEeeeee
Q 024917 235 YILLFSYA 242 (260)
Q Consensus 235 ~~~L~~~~ 242 (260)
+.+|..+.
T Consensus 166 ~~sl~~~~ 173 (175)
T 1vch_A 166 VDTVAELP 173 (175)
T ss_dssp CEEEEECC
T ss_pred eEEEEeec
Confidence 99998764
No 7
>1o57_A PUR operon repressor; purine operon repressor, helix-turn-helix domain, phosphoribosyltranseferases, domain recombination, DNA binding; HET: EPE P6G 2PE PG4 1PE; 2.20A {Bacillus subtilis} SCOP: a.4.5.40 c.61.1.1 PDB: 1p4a_A*
Probab=99.92 E-value=5.3e-24 Score=194.95 Aligned_cols=165 Identities=21% Similarity=0.377 Sum_probs=136.4
Q ss_pred cchHHHHHhccccccCCCCCCCceEEechhhccCHHHHHHHHHHHHHHHhcCCccEEEeecCchhhhHHHHHHHhCCCEE
Q 024917 74 QDPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFV 153 (260)
Q Consensus 74 ~~~~~~~l~~~iR~~p~fp~~Gi~f~Di~~ll~dp~~~~~l~~~La~~i~~~~iDvVVgve~rG~~lA~~LA~~Lgvp~v 153 (260)
.+...+.|.+..+..|+ + |.++..++.+|+.++.+++.+++.+.+.++|+|+|++.|||++|..+|+.+|+|++
T Consensus 84 ~~~l~~~l~~~~~v~~G----~--f~~~~~ll~~p~l~~~la~~la~~~~~~~~d~Iv~V~~rG~~~A~~lA~~L~vp~v 157 (291)
T 1o57_A 84 VQTLGQSLANPERILPG----G--YVYLTDILGKPSVLSKVGKLFASVFAEREIDVVMTVATKGIPLAYAAASYLNVPVV 157 (291)
T ss_dssp HHHHHHHHTCGGGEETT----T--EECCTTTTTCHHHHHHHHHHHHHHTTTSCCSEEEEETTTTHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHCCCcccC----C--eEEehhhhCCHHHHHHHHHHHHHHhhccCCCEEEEECCCCHHHHHHHHHHhCCCEE
Confidence 45567788888888887 5 67899999999999999999999998778999999999999999999999999999
Q ss_pred EEecCCCC-CCceeeeeeeecc--cceeEEEEecccCCCCeEEEEeeeccchHHHHHHHHHHHhCCCcEEEEEEEEecCc
Q 024917 154 PMRKPKKL-PGEVISEEYSLEY--GKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNA 230 (260)
Q Consensus 154 ~iRK~~kl-~~~~~s~~y~~e~--g~~~lel~~~~i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~~avlve~~~ 230 (260)
++||.++. ++.+++.+|.... ..+.+++....+.+|++|||||||+|||+|+.+++++|+++||+++++++++++++
T Consensus 158 ~~rk~~~~t~~~~~~~~~~~g~~~~~~~~~l~~~~l~~Gk~VLIVDDViTTG~Tl~~a~~~L~~aGA~vV~v~vlvdr~~ 237 (291)
T 1o57_A 158 IVRKDNKVTEGSTVSINYVSGSSNRIQTMSLAKRSMKTGSNVLIIDDFMKAGGTINGMINLLDEFNANVAGIGVLVEAEG 237 (291)
T ss_dssp EEBCC-----CCEEEEEEECSSCCSEEEEEEEGGGSCTTCEEEEEEEEESSSHHHHHHHHHTGGGTCEEEEEEEEEEESS
T ss_pred EEEEeccCCCCceeeeeeecccccceeeEEEecccCCCcCEEEEEEEEcCcHHHHHHHHHHHHHCCCEEEEEEEEEEcCc
Confidence 99987765 5666665553321 12356676656679999999999999999999999999999999999999999986
Q ss_pred c----CcceEEeeeeecc
Q 024917 231 C----FSSYILLFSYATN 244 (260)
Q Consensus 231 ~----~~e~~~L~~~~~~ 244 (260)
. ..++.+|+.++..
T Consensus 238 ~~~~l~~~~~SL~~~~~~ 255 (291)
T 1o57_A 238 VDERLVDEYMSLLTLSTI 255 (291)
T ss_dssp CTTSCCSCCEEEEEEECC
T ss_pred cccccCCceEEEEEEccc
Confidence 4 3478888888765
No 8
>1y0b_A Xanthine phosphoribosyltransferase; purine metabolism, STRU genomics, PSI, protein structure initative, midwest center structural genomics; HET: G4P; 1.80A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 2fxv_A*
Probab=99.92 E-value=2.4e-23 Score=178.73 Aligned_cols=175 Identities=17% Similarity=0.177 Sum_probs=137.2
Q ss_pred chHHHHHhccccccCCCCCCCceEEe-chhhccCHHHHHHHHHHHHHHHhcCCccEEEeecCchhhhHHHHHHHhCCCEE
Q 024917 75 DPRIAGISSAIRVIPDFPKPGIMFQD-ITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFV 153 (260)
Q Consensus 75 ~~~~~~l~~~iR~~p~fp~~Gi~f~D-i~~ll~dp~~~~~l~~~La~~i~~~~iDvVVgve~rG~~lA~~LA~~Lgvp~v 153 (260)
+.+.+.|.+.-++.++ +++|.| +.+...+|+.++.+++.+++.+...++|+|++++.|||++|..+|+.+|+|++
T Consensus 5 ~~l~~~l~~~~~~~~g----~~l~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~rG~~~a~~la~~l~~p~~ 80 (197)
T 1y0b_A 5 EALKRKIEEEGVVLSD----QVLKVDSFLNHQIDPLLMQRIGDEFASRFAKDGITKIVTIESSGIAPAVMTGLKLGVPVV 80 (197)
T ss_dssp HHHHHHHHHHCEEETT----TEEECTTTTSSEECHHHHHHHHHHHHHHTTTTTCCEEEEETTTTHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHhhCCEecCC----CEEEehhhhcccCCHHHHHHHHHHHHHHhhcCCCCEEEEEcccCHHHHHHHHHHhCCCEE
Confidence 3456777777777777 656544 34455899999999999999998767899999999999999999999999998
Q ss_pred EEecCCCCC--Cceeee-eeeecccc-eeEEEEecccCCCCeEEEEeeeccchHHHHHHHHHHHhCCCcEEEEEEEEecC
Q 024917 154 PMRKPKKLP--GEVISE-EYSLEYGK-DVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLN 229 (260)
Q Consensus 154 ~iRK~~kl~--~~~~s~-~y~~e~g~-~~lel~~~~i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~~avlve~~ 229 (260)
++||.++.+ +.+++. .+..+++. ..+++..+.+.+|++|||||||+|||+|+.+++++|+++|+++++++++++++
T Consensus 81 ~~rk~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~ 160 (197)
T 1y0b_A 81 FARKHKSLTLTDNLLTASVYSFTKQTESQIAVSGTHLSDQDHVLIIDDFLANGQAAHGLVSIVKQAGASIAGIGIVIEKS 160 (197)
T ss_dssp EEBSSCCSSCCSSEEEEEEEETTTTEEEEEEEEGGGCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEEET
T ss_pred EEEecCCCCCCCceEEEeeeccccCceEEEEEeccccCCcCEEEEEEcccccCHHHHHHHHHHHHCCCEEEEEEEEEEec
Confidence 888877655 454432 23333332 34666655556899999999999999999999999999999999999999996
Q ss_pred c---------cCcceEEeeeeeccCceeeeeec
Q 024917 230 A---------CFSSYILLFSYATNGFTQFTITS 253 (260)
Q Consensus 230 ~---------~~~e~~~L~~~~~~~~~~~~~~~ 253 (260)
. ...++.+|+.+++......++.+
T Consensus 161 ~~~~~~~l~~~~~~~~sl~~~~~i~~~~~~~~~ 193 (197)
T 1y0b_A 161 FQPGRDELVKLGYRVESLARIQSLEEGKVSFVQ 193 (197)
T ss_dssp TSTHHHHHHHTTCCEEEEEEEEECTTTCCEECC
T ss_pred ccchhhhHHhcCCcEEEEEEEEEecCCcEEEee
Confidence 3 13477899999887644444443
No 9
>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A*
Probab=99.88 E-value=2.1e-22 Score=179.34 Aligned_cols=139 Identities=19% Similarity=0.278 Sum_probs=109.7
Q ss_pred CCC-CCCc---eEEechhhccCHHHHHHHHHHHHHHHhcC--CccEEEeecCchhhhHHHHHHHhCCCEEEEecCCCCCC
Q 024917 90 DFP-KPGI---MFQDITTLLLDTKAFRDTIDLFVERYKDK--NISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPG 163 (260)
Q Consensus 90 ~fp-~~Gi---~f~Di~~ll~dp~~~~~l~~~La~~i~~~--~iDvVVgve~rG~~lA~~LA~~Lgvp~v~iRK~~kl~~ 163 (260)
.|- .+|. .|+|+..++.+|+.++.+++.|++.+.+. ++|+|+|++.+|+++|..+|+.+|+|++++||+.|.++
T Consensus 46 ~F~l~SG~~Sp~Y~d~~~~~~~p~~~~~l~~~la~~i~~~~~~~D~Ivg~~~gGi~~a~~lA~~L~~p~~~vrk~~k~~G 125 (234)
T 3m3h_A 46 PFTWSSGMKSPIYCDNRLTLSYPKVRQTIAAGLEELIKEHFPTVEVIAGTATAGIAHAAWVSDRMDLPMCYVRSKAKGHG 125 (234)
T ss_dssp CEECTTSCEESEEECGGGGGGCHHHHHHHHHHHHHHHHHHCTTCCEEEEC---CHHHHHHHHHHHTCCEEEEC-------
T ss_pred CEEcCcCCcCCEEEeCHHhccCHHHHHHHHHHHHHHHHHhCCCCCEEEEeccchHHHHHHHHHHcCCCEEEEEEeeccCC
Confidence 344 5566 68999999999999999999999999864 79999999999999999999999999999999876333
Q ss_pred ceeeeeeeecccceeEEEEecccCCCCeEEEEeeeccchHHHHHHHHHHHhCCCcEEEEEEEEecCc---------cCcc
Q 024917 164 EVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNA---------CFSS 234 (260)
Q Consensus 164 ~~~s~~y~~e~g~~~lel~~~~i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~~avlve~~~---------~~~e 234 (260)
. ... ..+.+.+|++||||||++|||+|+.+++++|+++|++++++++++++.. ..-+
T Consensus 126 ~------------~~~--i~g~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~vv~v~~l~~~~~~~~~e~l~~~gi~ 191 (234)
T 3m3h_A 126 K------------GNQ--IEGKAEKGQKVVVVEDLISTGGSAITCVEALREAGCEVLGIVSIFTYELEAGKEKLEAANVA 191 (234)
T ss_dssp --------------CC--EESCCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHTTCC
T ss_pred c------------ceE--EecccCCCCEEEEEecccchhHHHHHHHHHHHHCCCEEEEEEEEEECcCchHHHHHHhcCCC
Confidence 2 110 1245679999999999999999999999999999999999999999853 2346
Q ss_pred eEEeeeee
Q 024917 235 YILLFSYA 242 (260)
Q Consensus 235 ~~~L~~~~ 242 (260)
+.+|+.++
T Consensus 192 v~sL~~~~ 199 (234)
T 3m3h_A 192 SYSLSDYS 199 (234)
T ss_dssp EEESSCHH
T ss_pred EEEEeeHH
Confidence 77777665
No 10
>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, MAGN pyrimidine biosynthesis; 2.40A {Streptococcus mutans}
Probab=99.88 E-value=6e-22 Score=177.39 Aligned_cols=139 Identities=23% Similarity=0.333 Sum_probs=113.9
Q ss_pred CCC-CCCc---eEEechhhccCHHHHHHHHHHHHHHHhcC--CccEEEeecCchhhhHHHHHHHhCCCEEEEecCCCCCC
Q 024917 90 DFP-KPGI---MFQDITTLLLDTKAFRDTIDLFVERYKDK--NISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPG 163 (260)
Q Consensus 90 ~fp-~~Gi---~f~Di~~ll~dp~~~~~l~~~La~~i~~~--~iDvVVgve~rG~~lA~~LA~~Lgvp~v~iRK~~kl~~ 163 (260)
.|- ..|. .|+|+..++.+|+.++.+++.+++.+.+. ++|+|+|++.+|+++|..+|+.+++|++++||++|.++
T Consensus 58 ~F~L~SG~~Sp~Y~d~~~~l~~p~~~~~l~~~la~~i~~~~~~~DvIvg~~~gGi~~A~~lA~~L~~p~~~vrk~~k~~G 137 (243)
T 3dez_A 58 PFTWASGIKSPIYTDNRITLSYPETRTLIENGFVETIKEAFPEVEVIAGTATAGIPHGAIIADKMNLPLAYIRSKPKDHG 137 (243)
T ss_dssp CEEC---CEESEEECTTGGGGCHHHHHHHHHHHHHHHHHHCTTCCEEEEETTTTHHHHHHHHHHTTCCEEEECSSCC---
T ss_pred cEEeCCCCCCCEEEeCHHhccCHHHHHHHHHHHHHHHHhhCCCCCEEEEecCchHHHHHHHHHHcCCCEEEEEEeeccCC
Confidence 344 4565 68999999999999999999999999864 79999999999999999999999999999999877433
Q ss_pred ceeeeeeeecccceeEEEEecccCCCCeEEEEeeeccchHHHHHHHHHHHhCCCcEEEEEEEEecCc---------cCcc
Q 024917 164 EVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNA---------CFSS 234 (260)
Q Consensus 164 ~~~s~~y~~e~g~~~lel~~~~i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~~avlve~~~---------~~~e 234 (260)
... .+ .+.+.+|++||||||++|||+|+.+++++|+++|++++++++++++.. ..-+
T Consensus 138 ~~~-----------~i---eg~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~vv~v~~l~d~~~~~a~e~l~~~gi~ 203 (243)
T 3dez_A 138 AGN-----------QI---EGRVTKGQKMVIIEDLISTGGSVLDAVAAAQREGADVLGVVAIFTYELPKATANFEKASVK 203 (243)
T ss_dssp --C-----------CE---ESCCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHHTCC
T ss_pred cee-----------EE---EeccCCCCEEEEEEeeccccHHHHHHHHHHHHCCCEEEEEEEEEECCCchHHHHHHhcCCC
Confidence 210 11 245579999999999999999999999999999999999999999853 2236
Q ss_pred eEEeeeee
Q 024917 235 YILLFSYA 242 (260)
Q Consensus 235 ~~~L~~~~ 242 (260)
+++|+.++
T Consensus 204 ~~sL~~~~ 211 (243)
T 3dez_A 204 LVTLSNYS 211 (243)
T ss_dssp EEESSCHH
T ss_pred EEEEeeHH
Confidence 77777665
No 11
>2yzk_A OPRT, oprtase, orotate phosphoribosyltransferase; rossmann fold, glycosyltransferase, magnesium, pyrimidine biosynthesis, structural genomics; 1.80A {Aeropyrum pernix}
Probab=99.87 E-value=1.5e-21 Score=165.95 Aligned_cols=132 Identities=21% Similarity=0.292 Sum_probs=110.2
Q ss_pred eEEechhhccCHHHHHHHHHHHHHHH-hcC-CccEEEeecCchhhhHHHHHHHhCCCEEEEecCCCCCCceeeeeeeecc
Q 024917 97 MFQDITTLLLDTKAFRDTIDLFVERY-KDK-NISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEY 174 (260)
Q Consensus 97 ~f~Di~~ll~dp~~~~~l~~~La~~i-~~~-~iDvVVgve~rG~~lA~~LA~~Lgvp~v~iRK~~kl~~~~~s~~y~~e~ 174 (260)
.|+|+..++.+|+..+.+++.+++.+ .+. ++|+|+|++.||+++|..+|+.+|+|+.+.||..+ +|
T Consensus 27 ~f~d~~~l~~~~~~~~~l~~~l~~~~~~~~~~~~~iv~v~~~G~~~a~~la~~l~~p~~~~r~~~~------------~~ 94 (178)
T 2yzk_A 27 VYIDMRRLLGDESSYSVALDLLLEVGGQDLARSSAVIGVATGGLPWAAMLALRLSKPLGYVRPERK------------GH 94 (178)
T ss_dssp EEECGGGGTTCHHHHHHHHHHHHHHHHHHHHHCSEEEEETTTTHHHHHHHHHHHTCCEEEECCCCT------------TS
T ss_pred eEEEChHhccCHHHHHHHHHHHHHHHhcccCCCCEEEEecccchHHHHHHHHHHCCCEEEEEcccc------------cc
Confidence 48999999999999999999999988 654 68999999999999999999999999998888654 12
Q ss_pred cceeEEEEecccCCCCeEEEEeeeccchHHHHHHHHHHHhCCCcEEEEEEEEecCcc--------CcceEEeeeeec
Q 024917 175 GKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNAC--------FSSYILLFSYAT 243 (260)
Q Consensus 175 g~~~lel~~~~i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~~avlve~~~~--------~~e~~~L~~~~~ 243 (260)
+.... + .+.+ +|++|||||||+|||+|+.+++++|+++|++++++++++++++. ..++.+|+.++.
T Consensus 95 g~~~~-i-~~~~-~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~r~~~~~~~l~~~g~~~~sl~~~~~ 168 (178)
T 2yzk_A 95 GTLSQ-V-EGDP-PKGRVVVVDDVATTGTSIAKSIEVLRSNGYTVGTALVLVDRGEGAGELLARMGVRLVSVATLKT 168 (178)
T ss_dssp CCCCC-C-BTCC-CSSEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCSSHHHHHHTTTCEEEEEEEHHH
T ss_pred Cccce-e-cccC-CCCEEEEEEeccCCcHHHHHHHHHHHHcCCeEEEEEEEEEcCcCHHHHHHHcCCcEEEEeeHHH
Confidence 22211 1 1445 89999999999999999999999999999999999999998652 236677776653
No 12
>2wns_A Orotate phosphoribosyltransferase; alternative splicing, multifunctional enzyme, lyase, polymorphism, decarboxylase, phosphoprotein; HET: OMP; 1.90A {Homo sapiens}
Probab=99.87 E-value=1.8e-21 Score=169.17 Aligned_cols=133 Identities=15% Similarity=0.273 Sum_probs=112.8
Q ss_pred eEEechhhccCHHHHHHHHHHHHHHHhc--CCccEEEeecCchhhhHHHHHHHhCCCEEEEecCCCCCCceeeeeeeecc
Q 024917 97 MFQDITTLLLDTKAFRDTIDLFVERYKD--KNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEY 174 (260)
Q Consensus 97 ~f~Di~~ll~dp~~~~~l~~~La~~i~~--~~iDvVVgve~rG~~lA~~LA~~Lgvp~v~iRK~~kl~~~~~s~~y~~e~ 174 (260)
.|+|+..++.+|+..+.+++.+++.+.+ .++|+|+|++.+|+++|..+|+.+|+|+++.||..+ ++
T Consensus 31 ~y~d~~~l~~~~~~~~~l~~~la~~i~~~~~~~d~Iv~v~~~g~~~a~~la~~l~~p~~~~rk~~k------------~~ 98 (205)
T 2wns_A 31 IYIDLRGIVSRPRLLSQVADILFQTAQNAGISFDTVCGVPYTALPLATVICSTNQIPMLIRRKETK------------DY 98 (205)
T ss_dssp EEECGGGGGGSHHHHHHHHHHHHHHHHHTTCCCSEEEECTTTTHHHHHHHHHHHTCCEEEECCTTT------------TS
T ss_pred EEEeChHhcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEcCCchHHHHHHHHHHHCcCEEEEecCcC------------cc
Confidence 6889999999999999999999999875 578999999999999999999999999998888654 12
Q ss_pred cceeEEEEecccCCCCeEEEEeeeccchHHHHHHHHHHHhCCCcEEEEEEEEecCcc--------CcceEEeeeeec
Q 024917 175 GKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNAC--------FSSYILLFSYAT 243 (260)
Q Consensus 175 g~~~lel~~~~i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~~avlve~~~~--------~~e~~~L~~~~~ 243 (260)
+.... ..+.+.+|++||||||++|||+|+.+++++|+++|++++++++++++... ..++.+|+.++.
T Consensus 99 g~~~~--~~g~~~~gk~VliVDDvitTG~Tl~~a~~~L~~~Ga~~v~~~~l~~~~~~~~~~l~~~g~~v~sl~~~~~ 173 (205)
T 2wns_A 99 GTKRL--VEGTINPGETCLIIEDVVTSGSSVLETVEVLQKEGLKVTDAIVLLDREQGGKDKLQAHGIRLHSVCTLSK 173 (205)
T ss_dssp SSCCS--EESCCCTTCBEEEEEEEESSSHHHHHHHHHHHHTTCBCCEEEEEEECCSSHHHHHHTTTCEEEEEEEHHH
T ss_pred Ccccc--ccCCCCCCCEEEEEEEeccccHHHHHHHHHHHHCCCEEEEEEEEEEcCcchHHHHHHcCCeEEEEEEHHH
Confidence 32221 12556689999999999999999999999999999999999999999632 347778877653
No 13
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=99.86 E-value=3.1e-21 Score=186.32 Aligned_cols=143 Identities=20% Similarity=0.294 Sum_probs=120.8
Q ss_pred ccCCCC-CCCc---eEEechhhccCHHHHHHHHHHHHHHHhcCCccEEEeecCchhhhHHHHHHHhCCCEEEEecCCCCC
Q 024917 87 VIPDFP-KPGI---MFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLP 162 (260)
Q Consensus 87 ~~p~fp-~~Gi---~f~Di~~ll~dp~~~~~l~~~La~~i~~~~iDvVVgve~rG~~lA~~LA~~Lgvp~v~iRK~~kl~ 162 (260)
.+.+|+ ++|. .|+|++.++.+|+.++.+++.+++.+.+.++|+|+|++.+|+++|..+|+.+|+|++++||.+|
T Consensus 273 ~~g~F~L~SG~~S~~y~D~~~l~~~p~~~~~l~~~la~~~~~~~~D~Ivg~~~gGi~~A~~lA~~L~~p~~~~rk~~k-- 350 (453)
T 3qw4_B 273 RFGNFTLKSGKSSPIYIDLRRLVTYPAIMRLVAREYAKVLRHYKFDRIAGLPYAALPIASAISNEMNVPLIYPRREAK-- 350 (453)
T ss_dssp EESCCBCTTSSBCSEEECCGGGGGCHHHHHHHHHHHHHHHTTSCCSEEEECTTTTHHHHHHHHHHHCCCEEEESSCC---
T ss_pred EECCEeccCCCcCCEEEechHhccCHHHHHHHHHHHHHHhccCCCCEEEeccCCcHHHHHHHHHHhCCCEEEEEeecc--
Confidence 467899 7888 5999999999999999999999999988889999999999999999999999999999999776
Q ss_pred CceeeeeeeecccceeEEEEecccCCCCeEEEEeeeccchHHHHHHHHHHHhCCCcEEEEEEEEecCcc--------Ccc
Q 024917 163 GEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNAC--------FSS 234 (260)
Q Consensus 163 ~~~~s~~y~~e~g~~~lel~~~~i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~~avlve~~~~--------~~e 234 (260)
+||.... ..+.+.+|++||||||++|||+|+.+++++|+++|++++++++++++... .-+
T Consensus 351 ----------~~g~~~~--i~g~~~~G~~VliVDDvitTG~T~~~~~~~l~~~g~~vv~v~~lvdr~~~g~~~l~~~g~~ 418 (453)
T 3qw4_B 351 ----------IYGTKAA--IEGEYKKGDRVVIIDDLVSTGETKVEAIEKLRSAGLEVVSIVVLVDRDMGAKAFLNKLGYD 418 (453)
T ss_dssp ----------------C--EESCCCTTCEEEEEEEEECC-CCHHHHHHHHHTTTCEEEEEEEEEECSSSHHHHHHHTTCC
T ss_pred ----------ccCcCce--EecccCCCCEEEEEeeeechhHHHHHHHHHHHHcCCEEEEEEEEEECCcchHHHHHhcCCC
Confidence 2343321 12456799999999999999999999999999999999999999999752 236
Q ss_pred eEEeeeeec
Q 024917 235 YILLFSYAT 243 (260)
Q Consensus 235 ~~~L~~~~~ 243 (260)
+.+|+.+++
T Consensus 419 v~sL~~~~d 427 (453)
T 3qw4_B 419 FEAVVGLHQ 427 (453)
T ss_dssp EEEEEEHHH
T ss_pred EEEEeEHHH
Confidence 778877753
No 14
>3mjd_A Orotate phosphoribosyltransferase; IDP02311, csgid, structural genomics, center for structural genomics of infectious diseases; 1.90A {Francisella tularensis}
Probab=99.86 E-value=2.6e-21 Score=172.16 Aligned_cols=118 Identities=15% Similarity=0.202 Sum_probs=100.1
Q ss_pred eEEechhhccCHHHHHHHHHHHHHHHhcC--CccEEEeecCchhhhHHHHHHHh------CCCEEEEecCCCCCCceeee
Q 024917 97 MFQDITTLLLDTKAFRDTIDLFVERYKDK--NISVVAGIEARGFIFGPPIALAI------GAKFVPMRKPKKLPGEVISE 168 (260)
Q Consensus 97 ~f~Di~~ll~dp~~~~~l~~~La~~i~~~--~iDvVVgve~rG~~lA~~LA~~L------gvp~v~iRK~~kl~~~~~s~ 168 (260)
.|+|+. ++.+|+.++.+++.+++.+.+. ++|+|+|++.+|+++|..+|+.| ++|++++||..|.
T Consensus 51 ~y~d~~-~~~~p~~~~~l~~~la~~i~~~~~~~D~Ivg~~~gGi~~A~~lA~~L~~~~g~~~p~~~~RK~~k~------- 122 (232)
T 3mjd_A 51 YFFNAG-LFNTGAQLATLADYYAQLIIKSDVKYDILFGPAYKGIPLVAAISTVLALKYNIDMPYAFDRKEAKD------- 122 (232)
T ss_dssp EEECGG-GCCBHHHHHHHHHHHHHHHHHCCCCCSEEEECTTTHHHHHHHHHHHHHHHHCCCCBEEEECCC----------
T ss_pred eEeccc-ccCCHHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcHHHHHHHHHHHhhhcCCCCcEEEEEeeccc-------
Confidence 688984 6789999999999999999864 69999999999999999999997 8999999997763
Q ss_pred eeeeccccee-EEEEecccCCCCeEEEEeeeccchHHHHHHHHHHHhCCCcEEEEEEEEecCc
Q 024917 169 EYSLEYGKDV-MEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNA 230 (260)
Q Consensus 169 ~y~~e~g~~~-lel~~~~i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~~avlve~~~ 230 (260)
+|... ++ +...+|++|||||||+|||+|+.+++++|+++|++++++++++++++
T Consensus 123 -----~g~~~~i~---g~~~~Gk~VLIVDDVitTG~Tl~~a~~~L~~~Ga~vv~v~vlvdr~e 177 (232)
T 3mjd_A 123 -----HGEGGVFV---GADMTNKKVLLIDDVMTAGTAFYESYNKLKIINAKIAGVVLSIDRQE 177 (232)
T ss_dssp ---------CCEE---ESCCTTCEEEEECSCCSSSHHHHHHHHHHHTTTCEEEEEEEEEECCB
T ss_pred -----CCCCceEe---ccCCCCCEEEEEEeeccccHHHHHHHHHHHHCCCEEEEEEEEEECCc
Confidence 22221 21 33458999999999999999999999999999999999999999875
No 15
>2p1z_A Phosphoribosyltransferase; STRU genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.44A {Corynebacterium diphtheriae}
Probab=99.85 E-value=4.7e-21 Score=163.22 Aligned_cols=134 Identities=19% Similarity=0.196 Sum_probs=108.3
Q ss_pred eEEechhhccCHHHHHHHHHHHHHHHhcCCccEEEeecCchhhhHHHHHHHhCCC--EEEEecCCCCCCceeeeeeeecc
Q 024917 97 MFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAK--FVPMRKPKKLPGEVISEEYSLEY 174 (260)
Q Consensus 97 ~f~Di~~ll~dp~~~~~l~~~La~~i~~~~iDvVVgve~rG~~lA~~LA~~Lgvp--~v~iRK~~kl~~~~~s~~y~~e~ 174 (260)
.|+|+..++.+|+..+.+++.+++.+.+.++|+|+|++.+|+++|..+|+.+|+| ++++||..+. |
T Consensus 34 ~y~d~~~~~~~~~~~~~l~~~la~~i~~~~~d~vv~v~~gG~~~a~~la~~l~~~~~~~~~rk~~~~------------~ 101 (180)
T 2p1z_A 34 YYVDLRRATLHARASRLIGELLRELTADWDYVAVGGLTLGADPVATSVMHADGREIHAFVVRKEAKK------------H 101 (180)
T ss_dssp -CCCTHHHHTSHHHHHHHHHHHHHTTTTSCCSEEEEETTTHHHHHHHHHHSSSSCCEEEEECSCCC-------------C
T ss_pred EEEEChhhcCCHHHHHHHHHHHHHHHhhcCCCEEEEecCCCHHHHHHHHHHHCCCCCeEEEEecccc------------c
Confidence 5889999999999999999999999887789999999999999999999999876 4677765431 1
Q ss_pred cceeEEEEecccCCCCeEEEEeeeccchHHHHHHHHHHHhCCCcEEEEEEEEecCcc--------CcceEEeeeeecc
Q 024917 175 GKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNAC--------FSSYILLFSYATN 244 (260)
Q Consensus 175 g~~~lel~~~~i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~~avlve~~~~--------~~e~~~L~~~~~~ 244 (260)
+... .+ .+...+|++|||||||+|||+|+.+++++|+++|++++++++++++++. .-++.+|+.++..
T Consensus 102 g~~~-~~-~g~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~~~g~~~l~~~g~~~~sl~~~~~l 177 (180)
T 2p1z_A 102 GMQR-RI-EGPDVVGKKVLVVEDTTTTGNSPLTAVKALREAGAEVVGVATVVDRATGAADVIAAEGLEYRYILGLEDL 177 (180)
T ss_dssp C-CC-SE-ESSCCTTCEEEEEEEECSSSHHHHHHHHHHHHHTCEEEEEEEEEC-CCCHHHHHHTTTCCEEEEECSTTT
T ss_pred cchh-hc-cCCCCCcCEEEEEEeccCCcHHHHHHHHHHHHcCCeEEEEEEEEEcCcchHHHHHhcCCeEEEEEEHHHh
Confidence 2111 01 1344689999999999999999999999999999999999999999753 2356677766543
No 16
>3n2l_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, infectious diseases; 2.10A {Vibrio cholerae}
Probab=99.85 E-value=9.6e-21 Score=169.17 Aligned_cols=118 Identities=18% Similarity=0.282 Sum_probs=99.0
Q ss_pred eEEechhhccCHHHHHHHHHHHHHHHhc--CCccEEEeecCchhhhHHHHHHHh------CCCEEEEecCCCCCCceeee
Q 024917 97 MFQDITTLLLDTKAFRDTIDLFVERYKD--KNISVVAGIEARGFIFGPPIALAI------GAKFVPMRKPKKLPGEVISE 168 (260)
Q Consensus 97 ~f~Di~~ll~dp~~~~~l~~~La~~i~~--~~iDvVVgve~rG~~lA~~LA~~L------gvp~v~iRK~~kl~~~~~s~ 168 (260)
.|+|+ .++.+|+.++.+++.+++.+.+ .++|+|+|++++|+++|..+|..| ++|++++||+.|.++..
T Consensus 58 ~y~d~-~ll~~p~~l~~l~~~la~~i~~~~~~~D~Vvg~~~gGi~~A~~lA~~L~~~~g~~vp~~~~RK~~k~~g~~--- 133 (238)
T 3n2l_A 58 YFFNA-GLFNTGRDLARLGRFYAAALVDSGIEFDVLFGPAYKGIPIATTTAVALADHHDVDTPYCFNRKEAKNHGEG--- 133 (238)
T ss_dssp EEECG-GGCCBHHHHHHHHHHHHHHHHHHTCCCSEEEECTTTHHHHHHHHHHHHHHHSCCCCBEEEECCC----------
T ss_pred EEEEC-CCCCCHHHHHHHHHHHHHHHHhhCCCCCEEEecccChHHHHHHHHHHHhHhhCCCccEEEEeeccCCCCCC---
Confidence 68897 5789999999999999999875 379999999999999999999997 89999999987743221
Q ss_pred eeeecccceeEEEEecccCCCCeEEEEeeeccchHHHHHHHHHHHhCCCcEEEEEEEEecCc
Q 024917 169 EYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNA 230 (260)
Q Consensus 169 ~y~~e~g~~~lel~~~~i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~~avlve~~~ 230 (260)
..++ +...+| +||||||++|||+|+.+++++|+++|++++++++++++++
T Consensus 134 --------~~i~---G~~~~G-~VliVDDvitTG~T~~~a~~~l~~~Ga~vv~v~vlvdr~e 183 (238)
T 3n2l_A 134 --------GNLV---GSKLEG-RVMLVDDVITAGTAIRESMELIQANKADLAGVLVAIDRQE 183 (238)
T ss_dssp ---------CEE---ESCCCS-EEEEECSCCSSSHHHHHHHHHHHHTTCEEEEEEEEEECCC
T ss_pred --------ceEe---ccccCC-cEEEEeeeecccHHHHHHHHHHHHcCCEEEEEEEEEEccc
Confidence 1121 334589 9999999999999999999999999999999999999875
No 17
>2ps1_A Orotate phosphoribosyltransferase 1; alpha beta, oprtase-OA-PRPP complex; HET: ORO PRP; 1.75A {Saccharomyces cerevisiae} PDB: 2pry_A* 2prz_A*
Probab=99.85 E-value=1.1e-20 Score=166.33 Aligned_cols=119 Identities=16% Similarity=0.277 Sum_probs=102.8
Q ss_pred eEEechhhccCHHHHHHHHHHHHHHHhc--CCccEEEeecCchhhhHHHHHHHh---------CCCEEEEecCCCCCCce
Q 024917 97 MFQDITTLLLDTKAFRDTIDLFVERYKD--KNISVVAGIEARGFIFGPPIALAI---------GAKFVPMRKPKKLPGEV 165 (260)
Q Consensus 97 ~f~Di~~ll~dp~~~~~l~~~La~~i~~--~~iDvVVgve~rG~~lA~~LA~~L---------gvp~v~iRK~~kl~~~~ 165 (260)
.|+| ..++.+|+.++.+++.|++.+.+ .++|+|+|++.+||++|..+|+.+ ++|+++.||.++
T Consensus 37 ~y~d-~~ll~~~~~~~~l~~~la~~i~~~~~~~d~Vvg~~~~G~~~a~~lA~~L~~~~~~~~~~~p~~~~rk~~k----- 110 (226)
T 2ps1_A 37 YFFN-LGLFNTGKLLSNLATAYAIAIIQSDLKFDVIFGPAYKGIPLAAIVCVKLAEIGGSKFQNIQYAFNRKEAK----- 110 (226)
T ss_dssp EEEC-GGGCCBHHHHHHHHHHHHHHHHHHTCCCSEEEECTTTHHHHHHHHHHHHHHHSTTTTTTCEEEEEEEEEE-----
T ss_pred EEEe-cCccCCHHHHHHHHHHHHHHHHHhCCCCCEEEEeccCCHHHHHHHHHHHHhhhccccCCCCEEEEechhh-----
Confidence 5788 56999999999999999999875 368999999999999999999999 999999888655
Q ss_pred eeeeeeecccceeEEEEecccCCCCeEEEEeeeccchHHHHHHHHHHHhCCCcEEEEEEEEecCc
Q 024917 166 ISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNA 230 (260)
Q Consensus 166 ~s~~y~~e~g~~~lel~~~~i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~~avlve~~~ 230 (260)
.++.+.+.. +...+|++|||||||+|||+|+.+++++|+++|++++++++++++++
T Consensus 111 -------~~g~~~~~~--~~~i~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~~v~v~~l~dr~~ 166 (226)
T 2ps1_A 111 -------DHGEGGIIV--GSALENKRILIIDDVMTAGTAINEAFEIISNAKGQVVGSIIALDRQE 166 (226)
T ss_dssp -------SSTTCEEEE--ESCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCB
T ss_pred -------hcCCCceEe--cCCCCcCEEEEEEecccChHHHHHHHHHHHHcCCeEEEEEEEEEccC
Confidence 233333332 22348999999999999999999999999999999999999999985
No 18
>1lh0_A OMP synthase; loop closure, monomer closure, orotate phosphoribosyltransferase; HET: ORO PRP; 2.00A {Salmonella typhimurium} SCOP: c.61.1.1 PDB: 1opr_A* 1sto_A* 1oro_A
Probab=99.83 E-value=3.1e-20 Score=162.30 Aligned_cols=118 Identities=17% Similarity=0.273 Sum_probs=101.5
Q ss_pred eEEechhhccCHHHHHHHHHHHHHHHhc--CCccEEEeecCchhhhHHHHHHHh------CCCEEEEecCCCCCCceeee
Q 024917 97 MFQDITTLLLDTKAFRDTIDLFVERYKD--KNISVVAGIEARGFIFGPPIALAI------GAKFVPMRKPKKLPGEVISE 168 (260)
Q Consensus 97 ~f~Di~~ll~dp~~~~~l~~~La~~i~~--~~iDvVVgve~rG~~lA~~LA~~L------gvp~v~iRK~~kl~~~~~s~ 168 (260)
.|+| ..++.+|+.++.+++.+++.+.+ .++|+|+|++.+|+++|..+|+.+ ++|+++.||..+.++..
T Consensus 33 ~y~d-~~ll~~~~~~~~~~~~la~~i~~~~~~~d~Ivgv~~~G~~~a~~lA~~L~~~~~~~~~~~~~rk~~~~~~~~--- 108 (213)
T 1lh0_A 33 YFFN-AGLFNTGRDLALLGRFYAEALVDSGIEFDLLFGPAYKGIPIATTTAVALAEHHDKDLPYCFNRKEAKDHGEG--- 108 (213)
T ss_dssp EEEC-GGGCCBHHHHHHHHHHHHHHHHHHCCCCSEEECCTTTHHHHHHHHHHHHHHHHCCCCBEEEECSSCCSSTTC---
T ss_pred EEEe-cCccCCHHHHHHHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHHHHHhhCCCCCEEEEEeccCccCCC---
Confidence 6888 67999999999999999998875 369999999999999999999999 99999999876632210
Q ss_pred eeeecccceeEEEEecccCCCCeEEEEeeeccchHHHHHHHHHHHhCCCcEEEEEEEEecCc
Q 024917 169 EYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNA 230 (260)
Q Consensus 169 ~y~~e~g~~~lel~~~~i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~~avlve~~~ 230 (260)
..++ +...+| +|||||||+|||+|+.+++++|+++|++++++++++++++
T Consensus 109 --------~~~~---g~~~~g-~VliVDDvitTG~Tl~~a~~~l~~~Ga~~v~v~~l~dr~~ 158 (213)
T 1lh0_A 109 --------GSLV---GSALQG-RVMLVDDVITAGTAIRESMEIIQAHGATLAGVLISLDRQE 158 (213)
T ss_dssp --------SSEE---ESCCCS-EEEEECSCCSSSCHHHHHHHHHHHTTCEEEEEEEEEECCB
T ss_pred --------Ccee---CCCCCC-CEEEEEecccchHHHHHHHHHHHHCCCeEEEEEEEEEccc
Confidence 0111 234589 9999999999999999999999999999999999999985
No 19
>3hvu_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, 2-(N-morphol ethanesulfonic acid (MES), IDP01892; HET: MES; 1.95A {Bacillus anthracis str} PDB: 3h83_A* 3kb8_A*
Probab=99.83 E-value=4.4e-20 Score=161.32 Aligned_cols=142 Identities=15% Similarity=0.183 Sum_probs=110.2
Q ss_pred ccCCCCCCCceEEechhhccCHHHHHHHHHHHHHHHhc-C--CccEEEeecCchhhhHHHHHHHhCCCE--EEEecCCCC
Q 024917 87 VIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKD-K--NISVVAGIEARGFIFGPPIALAIGAKF--VPMRKPKKL 161 (260)
Q Consensus 87 ~~p~fp~~Gi~f~Di~~ll~dp~~~~~l~~~La~~i~~-~--~iDvVVgve~rG~~lA~~LA~~Lgvp~--v~iRK~~kl 161 (260)
.-|+||++|++..|++.++.+++.++...+.|++++.+ . +.++|||++.+|+++|..+|+.+++|+ .++++..
T Consensus 16 ~~~~f~~~~~~~~di~~~l~s~~~i~~~i~~LA~~I~~~~~~~~~vVVgi~~GG~~~a~~La~~L~~p~~~~~i~~~~-- 93 (204)
T 3hvu_A 16 ENLYFQSNAMMNQDIEKVLISEEQIQEKVLELGAIIAEDYKNTVPLAIGVLKGAMPFMADLLKRTDTYLEMDFMAVSS-- 93 (204)
T ss_dssp ---CCCCCCCGGGGEEEEEECHHHHHHHHHHHHHHHHHHTSSSCCEEEEETTTTHHHHHHHHHTCCSCCEEEEEEEEE--
T ss_pred CCCCCCCchhhhhcCCcEeCCHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcchHHHHHHHHHHhCCCcceEEEEEEE--
Confidence 36899999999889999999999999988888887653 1 579999999999999999999999984 3444321
Q ss_pred CCceeeeeeee-cccceeEEEEec--ccCCCCeEEEEeeeccchHHHHHHHHHHHhCCCcEEEEEEEEecCc-----cCc
Q 024917 162 PGEVISEEYSL-EYGKDVMEMHVG--AVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNA-----CFS 233 (260)
Q Consensus 162 ~~~~~s~~y~~-e~g~~~lel~~~--~i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~~avlve~~~-----~~~ 233 (260)
|.. +++.+.+++..+ ...+|++||||||+++||+|+.+++++|++.|++.+.++++++++. ..+
T Consensus 94 --------Y~~~~~~~~~v~i~~~l~~~~~gk~VliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~k~~~~~~~~~~ 165 (204)
T 3hvu_A 94 --------YGHSTVSTGEVKILKDLDTSVEGRDILIVEDIIDSGLTLSYLVDLFKYRKAKSVKIVTLLDKPTGRKVDLKA 165 (204)
T ss_dssp --------CSGGGTTSCCEEEEECCSSCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCSEEEEEEEEECGGGCSSCCCC
T ss_pred --------ecCCCccCCcEEEEcCCCccCCCCEEEEEeceeCchHHHHHHHHHHHHcCCCEEEEEEEEECCCCCcCCCCC
Confidence 110 011222333322 2348999999999999999999999999999999999999999974 345
Q ss_pred ceEEe
Q 024917 234 SYILL 238 (260)
Q Consensus 234 e~~~L 238 (260)
||+.+
T Consensus 166 Dy~g~ 170 (204)
T 3hvu_A 166 DYVGF 170 (204)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 77654
No 20
>2aee_A OPRT, oprtase, orotate phosphoribosyltransferase; structural genomics, PSI, structure initiative; 1.95A {Streptococcus pyogenes} SCOP: c.61.1.1
Probab=99.83 E-value=5.8e-20 Score=159.82 Aligned_cols=119 Identities=25% Similarity=0.343 Sum_probs=102.3
Q ss_pred eEEechhhccCHHHHHHHHHHHHHHHhc--CCccEEEeecCchhhhHHHHHHHhCCCEEEEecCCCCCCceeeeeeeecc
Q 024917 97 MFQDITTLLLDTKAFRDTIDLFVERYKD--KNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEY 174 (260)
Q Consensus 97 ~f~Di~~ll~dp~~~~~l~~~La~~i~~--~~iDvVVgve~rG~~lA~~LA~~Lgvp~v~iRK~~kl~~~~~s~~y~~e~ 174 (260)
.|+|+..++.+|+..+.+++.+++.+.+ .++|+|+|++.||+++|..+|+.+|+|+.++||.++.++..
T Consensus 37 ~~~D~~~l~~~~~~~~~~~~~la~~i~~~~~~~d~vv~v~~~g~~~a~~la~~l~~p~~~~rk~~~~~g~~--------- 107 (211)
T 2aee_A 37 IYTDNRVTLSYPKTRDLIENGFVETIKAHFPEVEVIAGTATAGIPHGAIIADKMTLPFAYIRSKPKDHGAG--------- 107 (211)
T ss_dssp EEECGGGGGGCHHHHHHHHHHHHHHHHHHCTTCCEEEEETTTTHHHHHHHHHHHTCCEEEECSSCC----C---------
T ss_pred eEEeChhhcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEeccCcHHHHHHHHHHhCCCEEEEEeecCCcCCc---------
Confidence 4889999999999999999999998864 26899999999999999999999999999999877532210
Q ss_pred cceeEEEEecccCCCCeEEEEeeeccchHHHHHHHHHHHhCCCcEEEEEEEEecC
Q 024917 175 GKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLN 229 (260)
Q Consensus 175 g~~~lel~~~~i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~~avlve~~ 229 (260)
..++ +...+|++||||||++|||+|+.+++++|++.|+++++++++++++
T Consensus 108 --~~i~---g~~~~gk~VliVDDvitTG~Tl~~a~~~L~~~Ga~~v~v~~l~~~~ 157 (211)
T 2aee_A 108 --NQIE---GRVLKGQKMVIIEDLISTGGSVLDAAAAASREGADVLGVVAIFTYE 157 (211)
T ss_dssp --CSEE---SCCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEECC
T ss_pred --ceec---CCCCCcCEEEEEeecccchHHHHHHHHHHHHCCCcEEEEEEEEecc
Confidence 1121 3446899999999999999999999999999999999999999986
No 21
>1fsg_A HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: PRP 9DG; 1.05A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1qk3_A* 1qk4_A* 1qk5_A* 1dbr_A
Probab=99.82 E-value=2.9e-20 Score=164.74 Aligned_cols=152 Identities=14% Similarity=0.077 Sum_probs=117.1
Q ss_pred cCCCCCCCceEEechhhccCHHHHHHHHHHHHHHHhc---CCccEEEeecCchhhhHHHHHHHhCCCEEEEe-cCCCCCC
Q 024917 88 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKFVPMR-KPKKLPG 163 (260)
Q Consensus 88 ~p~fp~~Gi~f~Di~~ll~dp~~~~~l~~~La~~i~~---~~iDvVVgve~rG~~lA~~LA~~Lgvp~v~iR-K~~kl~~ 163 (260)
..+||.||+.|.|+..++.+++.++..++.|++++.+ .+.|+|+|++.||+++|..+|+.|+.++.+.+ |+.++|.
T Consensus 32 ~~~F~~~~~~~~di~~~l~~~~~i~~~~~~La~~i~~~~~~~~~vVvgi~~gG~~~a~~la~~L~~~~~~~~~k~~~~P~ 111 (233)
T 1fsg_A 32 ADDFLVPPHCKPYIDKILLPGGLVKDRVEKLAYDIHRTYFGEELHIICILKGSRGFFNLLIDYLATIQKYSGRESSVPPF 111 (233)
T ss_dssp GGGSCCCTTTTTTCCEEEECHHHHHHHHHHHHHHHHHHHTTSCEEEEEEETTTHHHHHHHHHHHHHHHHHCSSCCSSCSC
T ss_pred cccCccCCcchhhCcEEeeCHHHHHHHHHHHHHHHHHHcCCCCCEEEEEccCCHHHHHHHHHHhCCcccccccccCCCCc
Confidence 5689999998999999999999999999999887754 36899999999999999999999998654444 3334442
Q ss_pred --ceee-eeeeecccceeEEEEec--ccCCCCeEEEEeeeccchHHHHHHHHHHHhCCCcEEEEEEEEecCcc-----Cc
Q 024917 164 --EVIS-EEYSLEYGKDVMEMHVG--AVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNAC-----FS 233 (260)
Q Consensus 164 --~~~s-~~y~~e~g~~~lel~~~--~i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~~avlve~~~~-----~~ 233 (260)
..+. ..|..++..+.+++..+ ...+|++||||||+++||+|+.+++++|++.|++.+.++++++++.. ..
T Consensus 112 ~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~Gk~VLIVDDii~TG~Tl~~a~~~L~~~ga~~V~vavl~~k~~~~~~~~~~ 191 (233)
T 1fsg_A 112 FEHYVRLKSYQNDNSTGQLTVLSDDLSIFRDKHVLIVEDIVDTGFTLTEFGERLKAVGPKSMRIATLVEKRTDRSNSLKG 191 (233)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSCGGGGTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECCTTCCSCBC
T ss_pred EEEEEEEEeccCccccccEEEecCCccccCCCEEEEEccccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCccccCCCCc
Confidence 1222 23433223333444432 22589999999999999999999999999999999999999998753 34
Q ss_pred ceEEee
Q 024917 234 SYILLF 239 (260)
Q Consensus 234 e~~~L~ 239 (260)
+|+.+-
T Consensus 192 dy~g~~ 197 (233)
T 1fsg_A 192 DFVGFS 197 (233)
T ss_dssp SEEEEE
T ss_pred cEEEEE
Confidence 666643
No 22
>3ozf_A Hypoxanthine-guanine-xanthine phosphoribosyltrans; transferase-transferase inhibitor complex; HET: HPA; 1.94A {Plasmodium falciparum fcr-3} PDB: 3ozg_A* 1cjb_A*
Probab=99.79 E-value=1.9e-19 Score=161.84 Aligned_cols=148 Identities=15% Similarity=0.183 Sum_probs=119.3
Q ss_pred CCCCCceEEechhhccCHHHHHHHHHHHHHHHhc---CCccEEEeecCchhhhHHHHHHHhCCCEEE-EecCCCCCCce-
Q 024917 91 FPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKFVP-MRKPKKLPGEV- 165 (260)
Q Consensus 91 fp~~Gi~f~Di~~ll~dp~~~~~l~~~La~~i~~---~~iDvVVgve~rG~~lA~~LA~~Lgvp~v~-iRK~~kl~~~~- 165 (260)
|..|..++.|+..++.+++.++...+.|++++.+ .+.++|+|++.||++||..+|+.|+.++++ +||++++|.++
T Consensus 49 f~~p~~~~~di~~vli~~~~I~~~i~~LA~~I~~~~~~~~~vVVgIl~gG~~fa~~La~~L~~~~v~~~rk~gklP~~v~ 128 (250)
T 3ozf_A 49 FMIPAHYKKYLTKVLVPNGVIKNRIEKLAYDIKKVYNNEEFHILCLLKGSRGFFTALLKHLSRIHNYSAVETSKPLFGEH 128 (250)
T ss_dssp SCCCGGGGGGEEEEEECHHHHHHHHHHHHHHHHHHHTTCCEEEEEEETTTHHHHHHHHHHHHHHHHHHCCTTCCCCEEEE
T ss_pred ccCchhhhccCeEEEECHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcchHHHHHHHHHHhccccccccccccCCCceEE
Confidence 5555666778999999999999888888876643 257899999999999999999999977665 47888887554
Q ss_pred -e-eeeeeecccceeEEEEeccc--CCCCeEEEEeeeccchHHHHHHHHHHHhCCCcEEEEEEEEecCcc-----CcceE
Q 024917 166 -I-SEEYSLEYGKDVMEMHVGAV--QAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNAC-----FSSYI 236 (260)
Q Consensus 166 -~-s~~y~~e~g~~~lel~~~~i--~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~~avlve~~~~-----~~e~~ 236 (260)
+ ..+|..+++.+.+++..+.. .+|++||||||+++||+|+.+++++|++.|++.+.++++++++.. ..||+
T Consensus 129 fI~~ssY~~~~s~g~v~i~~~~~~~~~gk~VlIVDDii~TG~Tl~~~~~~L~~~g~~~v~va~l~~k~~~r~~~i~~Dyv 208 (250)
T 3ozf_A 129 YVRVKSYCNDQSTGTLEIVSEDLSCLKGKHVLIVEDIIDTGKTLVKFCEYLKKFEIKTVAIACLFIKRTPLWNGFKADFV 208 (250)
T ss_dssp EEEEEEEETTEEEEEEEEECCCGGGGTTCEEEEEEEEESSSHHHHHHHHHHGGGCCSEEEEEEEEEECCTTCCCCBCSEE
T ss_pred EEEEEEecCCcccCcEEEEcCCccccCCCEEEEEeceeCchHHHHHHHHHHHhcCCCEEEEEEEEECCccccCCCCCcEE
Confidence 2 24676666666677765432 489999999999999999999999999999999999999999863 35666
Q ss_pred Ee
Q 024917 237 LL 238 (260)
Q Consensus 237 ~L 238 (260)
.+
T Consensus 209 G~ 210 (250)
T 3ozf_A 209 GF 210 (250)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 23
>1z7g_A HGPRT, HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; flexibility, trans CIS peptide bond isomerization, nucleotide binding; 1.90A {Homo sapiens} SCOP: c.61.1.1 PDB: 1hmp_A* 1bzy_A 3gep_A* 3ggc_A* 3ggj_A* 1d6n_A* 2vfa_A*
Probab=99.78 E-value=7e-19 Score=154.25 Aligned_cols=144 Identities=13% Similarity=0.191 Sum_probs=109.6
Q ss_pred ccCCCCCCCceEEechhhccCHHHHHHHHHHHHHHHhc---CCccEEEeecCchhhhHHHHHHHhC---------CCE--
Q 024917 87 VIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIG---------AKF-- 152 (260)
Q Consensus 87 ~~p~fp~~Gi~f~Di~~ll~dp~~~~~l~~~La~~i~~---~~iDvVVgve~rG~~lA~~LA~~Lg---------vp~-- 152 (260)
..++||.||+.|.|++.++.+++.++...+.|++++.+ .+.++|+|++.+|+++|..+|++|+ +|+
T Consensus 17 ~~~~f~~~~~~~~di~~il~~~~~~~~~~~~La~~i~~~~~~~~~vVvgi~~GG~~~a~~la~~L~~~~~i~~g~~~~~~ 96 (217)
T 1z7g_A 17 DLDLFCIPNHYAEDLERVFIPHGLIMDRTERLARDVMKEMGGHHIVALCVLKGGYKFFADLLDYIKALNRNSDRSIPMTV 96 (217)
T ss_dssp CGGGSCCCGGGTTTEEEEEECHHHHHHHHHHHHHHHHHHHTTSCEEEEEECSSCCHHHHHHHHHHHHHHTTCSSCCCEEE
T ss_pred cccccccCcccccccceEEECHHHHHHHHHHHHHHHHHHcCCCCCEEEEECCCCHHHHHHHHHHhCCccccCCCceEeee
Confidence 36789999999999999999999999988888887753 4688999999999999999999999 453
Q ss_pred EEEecCCCCCCceeeeeeeecccceeEEEEe--c-ccCCCCeEEEEeeeccchHHHHHHHHHHHhCCCcEEEEEEEEecC
Q 024917 153 VPMRKPKKLPGEVISEEYSLEYGKDVMEMHV--G-AVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLN 229 (260)
Q Consensus 153 v~iRK~~kl~~~~~s~~y~~e~g~~~lel~~--~-~i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~~avlve~~ 229 (260)
.+++.. +|..++..+.+.+.. . ...+|++||||||+++||+|+.+++++|++.|++.+.++++++++
T Consensus 97 ~~i~~~----------~y~~~~~~~~~~~~~~~~~~~~~gk~VliVDDii~TG~Tl~~~~~~L~~~g~~~v~~~~l~~k~ 166 (217)
T 1z7g_A 97 DFIRLK----------SYCNDQSTGDIKVIGGDDLSTLTGKNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVKVASLLVKR 166 (217)
T ss_dssp EEECBC--------------------CCBCCSSCGGGGTTSEEEEEEEECCCHHHHHHHHHHHHTTCCSEEEEEEEEEEC
T ss_pred eeEEEE----------EecccccccceEEecCCCccccCCCEEEEEeceeCcHHHHHHHHHHHHhcCCCEEEEEEEEECc
Confidence 223311 121111111122221 1 225899999999999999999999999999999999999999987
Q ss_pred c-----cCcceEEeee
Q 024917 230 A-----CFSSYILLFS 240 (260)
Q Consensus 230 ~-----~~~e~~~L~~ 240 (260)
+ ..++|+++-.
T Consensus 167 ~~~~~~~~~dyvg~~~ 182 (217)
T 1z7g_A 167 TPRSVGYKPDFVGFEI 182 (217)
T ss_dssp C-----CCCSEEEEEE
T ss_pred ccccCCCCCcEEEEEc
Confidence 4 4567877643
No 24
>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1
Probab=99.76 E-value=6e-18 Score=139.05 Aligned_cols=127 Identities=20% Similarity=0.258 Sum_probs=96.0
Q ss_pred hccCHHHHHHHHHHHHHHHhcCCccEEEeecCchhhhHHHHHHHhCCCEE-EEecC-CCCCCceeeeeeeecccceeEEE
Q 024917 104 LLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFV-PMRKP-KKLPGEVISEEYSLEYGKDVMEM 181 (260)
Q Consensus 104 ll~dp~~~~~l~~~La~~i~~~~iDvVVgve~rG~~lA~~LA~~Lgvp~v-~iRK~-~kl~~~~~s~~y~~e~g~~~lel 181 (260)
++.+.+.++.+++.|++++.+.++|+|++++.||+++|..+|+.+|+|++ .+++. .+-.+. ......+..
T Consensus 4 ~~~s~~~~~~~~~~la~~i~~~~~d~iv~v~~gg~~~a~~la~~l~~~~~~~~~~~~~~~~~~--------~~~~~~~~~ 75 (153)
T 1vdm_A 4 VYLTWWQVDRAIFALAEKLREYKPDVIIGVARGGLIPAVRLSHILGDIPLKVIDVKFYKGIDE--------RGEKPVITI 75 (153)
T ss_dssp EECCHHHHHHHHHHHHHHHHHHCCSEEEEETTTTHHHHHHHHHHTTSCCEEEEEEECCCC--C--------CCSSCEEEE
T ss_pred eECCHHHHHHHHHHHHHHHHccCCCEEEEECCcCHHHHHHHHHHhCCCceEEEEEEEecCCcc--------cccceeEec
Confidence 45677788888999998886667899999999999999999999999964 33332 110000 000012333
Q ss_pred EecccCCCCeEEEEeeeccchHHHHHHHHHHHhCCCcEEEEEEEEecCcc--CcceEEe
Q 024917 182 HVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNAC--FSSYILL 238 (260)
Q Consensus 182 ~~~~i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~~avlve~~~~--~~e~~~L 238 (260)
......+|++||||||++|||+|+.+++++|+++|++.+.++++++++.. ..||+.+
T Consensus 76 ~~~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~ga~~v~~~~l~~~~~~~~~~dy~g~ 134 (153)
T 1vdm_A 76 PIHGDLKDKRVVIVDDVSDTGKTLEVVIEEVKKLGAKEIKIACLAMKPWTSVVPDYYVF 134 (153)
T ss_dssp CCCSCCBTCEEEEEEEEESSCHHHHHHHHHHHTTTBSEEEEEEEEECTTCSSCCSBBCE
T ss_pred cCCcCCCCCEEEEEecccCChHHHHHHHHHHHHcCCCEEEEEEEEeCCCCCCCceEEEE
Confidence 32334589999999999999999999999999999999999999998763 3666654
No 25
>1hgx_A HGXPRTASE, hypoxanthine-guanine-xanthine phosphoribosyltransferase; glycosyltransferase, purine salvage, transferase (glycosyltransferase); HET: 5GP; 1.90A {Tritrichomonas foetus} SCOP: c.61.1.1
Probab=99.75 E-value=4.8e-18 Score=144.35 Aligned_cols=130 Identities=13% Similarity=0.175 Sum_probs=98.0
Q ss_pred EechhhccCHHHHHHHHHHHHHHHhc---CCccEEEeecCchhhhHHHHHHHhCCCEEE--EecCCCCCCceeeeeeeec
Q 024917 99 QDITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKFVP--MRKPKKLPGEVISEEYSLE 173 (260)
Q Consensus 99 ~Di~~ll~dp~~~~~l~~~La~~i~~---~~iDvVVgve~rG~~lA~~LA~~Lgvp~v~--iRK~~kl~~~~~s~~y~~e 173 (260)
.|++.++.+++.++..++.|++++.+ .+.++|+|++.+|+++|..+|+.+|+|+.. ++... |..+
T Consensus 8 ~di~~~l~~~~~i~~~~~~la~~i~~~~~~~~~vvv~i~~gg~~~a~~la~~l~~p~~~~~~~~~~----------y~~~ 77 (183)
T 1hgx_A 8 DDLERVLYNQDDIQKRIRELAAELTEFYEDKNPVMICVLTGAVFFYTDLLKHLDFQLEPDYIICSS----------YSGT 77 (183)
T ss_dssp TTEEEEEECHHHHHHHHHHHHHHHHHHHTTTCCEEEEETTTTHHHHHHHHTTCCSCCEEEEEEEEC--------------
T ss_pred cCcceEEcCHHHHHHHHHHHHHHHHHHcCCCCcEEEEeCcChHHHHHHHHHHcCCCcceeEEEEEe----------cCCc
Confidence 47888999999999999999988764 268999999999999999999999999643 22110 0000
Q ss_pred ccceeEEEEe--cccCCCCeEEEEeeeccchHHHHHHHHHHHhCCCcEEEEEEEEecCc------cCcceEEe
Q 024917 174 YGKDVMEMHV--GAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNA------CFSSYILL 238 (260)
Q Consensus 174 ~g~~~lel~~--~~i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~~avlve~~~------~~~e~~~L 238 (260)
+..+.+++.. ....+|++||||||+++||+|+.+++++|++.|++.+.++++++++. ...||+.+
T Consensus 78 ~~~~~~~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga~~v~~~~l~~~~~g~~~~~~~~d~~g~ 150 (183)
T 1hgx_A 78 KSTGNLTISKDLKTNIEGRHVLVVEDIIDTGLTMYQLLNNLQMRKPASLKVCTLCDKDIGKKAYDVPIDYCGF 150 (183)
T ss_dssp -----CEEEECCSSCCTTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECCSSCSSCCCCSEEEE
T ss_pred ccccceEEeecCCCCCCCCEEEEECCccCCHHHHHHHHHHHHhcCCCEEEEEEEEecCcccccCCCCCCEEEE
Confidence 1111122221 22358999999999999999999999999999999999999998865 22466664
No 26
>2jbh_A Phosphoribosyltransferase domain-containing prote; glycosyltransferase, purine salvage; HET: 5GP; 1.7A {Homo sapiens}
Probab=99.74 E-value=9.2e-18 Score=147.74 Aligned_cols=141 Identities=17% Similarity=0.249 Sum_probs=105.4
Q ss_pred CCCCCCCceEEechhhccCHHHHHHHHHHHHHHHhc---CCccEEEeecCchhhhHHHHHHHhC---------CCE--EE
Q 024917 89 PDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIG---------AKF--VP 154 (260)
Q Consensus 89 p~fp~~Gi~f~Di~~ll~dp~~~~~l~~~La~~i~~---~~iDvVVgve~rG~~lA~~LA~~Lg---------vp~--v~ 154 (260)
..||.||+.|.|+..++.+++.+...+..|++++.+ .+.++|+|++.+|+++|..+|+.|+ +|+ -+
T Consensus 27 ~~F~~~~~~~~di~~~l~~~~~i~~~~~~La~~i~~~~~~~~~vvv~i~~gG~~~a~~la~~L~~~~~~~~~~~p~~~~~ 106 (225)
T 2jbh_A 27 NLFTYPQHYYGDLEYVLIPHGIIVDRIERLAKDIMKDIGYSDIMVLCVLKGGYKFXADLVEHLKNISRNSDRFVSMKVDF 106 (225)
T ss_dssp GGSCCCGGGTTSEEEEEECHHHHHHHHHHHHHHHHHHHTTSCEEEEEEETTTHHHHHHHHHHHHHHHHHSSCCCCEEEEE
T ss_pred HHCccCccccccCceEEECHHHHHHHHHHHHHHHHHHcCCCCCEEEEEcCCCEehhHHHHHHhhhhccccccCCCceEEE
Confidence 358889988889999999999999888888877763 3689999999999999999999998 553 23
Q ss_pred EecCCCCCCceeeeeeeecccceeEEEEe--c-ccCCCCeEEEEeeeccchHHHHHHHHHHHhCCCcEEEEEEEEecCc-
Q 024917 155 MRKPKKLPGEVISEEYSLEYGKDVMEMHV--G-AVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNA- 230 (260)
Q Consensus 155 iRK~~kl~~~~~s~~y~~e~g~~~lel~~--~-~i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~~avlve~~~- 230 (260)
+++. .|..++..+.+.+.. . ...+|++||||||+++||+|+.+++++|++.|++.+.++++++++.
T Consensus 107 i~~~----------~y~~~~~~~~~~~~~~~~~~~v~Gk~VllVDDii~TG~Tl~~a~~~L~~~ga~~V~va~l~~k~~~ 176 (225)
T 2jbh_A 107 IRLK----------SYRNDQSMGEMQIIGGDDLSTLAGKNVLIVEDVVGTGRTMKALLSNIEKYKPNMIKVASLLVKRTS 176 (225)
T ss_dssp EEEC--------------------CCEESSSCGGGGTTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECC-
T ss_pred EEEE----------eccCccccccEEEecCCCccccCCCEEEEEccccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCcc
Confidence 3321 111111111222222 1 2248999999999999999999999999999999999999999775
Q ss_pred ----cCcceEEee
Q 024917 231 ----CFSSYILLF 239 (260)
Q Consensus 231 ----~~~e~~~L~ 239 (260)
...||+.+-
T Consensus 177 ~~~~~~~dy~g~~ 189 (225)
T 2jbh_A 177 RSDGFRPDYAGFE 189 (225)
T ss_dssp CCSCCCCSEEEEE
T ss_pred ccCCCCccEEEEE
Confidence 234666653
No 27
>3o7m_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, salvage of nucleosides and nucleotides; HET: GOL; 1.98A {Bacillus anthracis} SCOP: c.61.1.0
Probab=99.72 E-value=7.8e-17 Score=138.60 Aligned_cols=130 Identities=12% Similarity=0.169 Sum_probs=99.3
Q ss_pred EechhhccCHHHHHHHHHHHHHHHhc-C--CccEEEeecCchhhhHHHHHHHhCCCEE--EEecCCCCCCceeeeeeee-
Q 024917 99 QDITTLLLDTKAFRDTIDLFVERYKD-K--NISVVAGIEARGFIFGPPIALAIGAKFV--PMRKPKKLPGEVISEEYSL- 172 (260)
Q Consensus 99 ~Di~~ll~dp~~~~~l~~~La~~i~~-~--~iDvVVgve~rG~~lA~~LA~~Lgvp~v--~iRK~~kl~~~~~s~~y~~- 172 (260)
-|++.++.+++.++...+.|++++.+ . +.++|+|++.+|+++|..+|+.+++|+. ++++.. |..
T Consensus 6 ~di~~~l~~~~~i~~~i~~La~~I~~~~~~~~~vvVgi~~gG~~~a~~la~~L~~p~~i~~i~~~~----------Y~~~ 75 (186)
T 3o7m_A 6 IEIKDTLISEEQLQEKVKELALQIERDFEGEEIVVIAVLKGSFVFAADLIRHIKNDVTIDFISASS----------YGNQ 75 (186)
T ss_dssp CEEEEEEECHHHHHHHHHHHHHHHHHHTTTSCEEEEEETTTTHHHHHHHHTTCCSCEEEEEEEEEE----------CC--
T ss_pred ccccEEecCHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcchHHHHHHHHHHhCCCCceEEEEEEE----------ecCC
Confidence 37889999999999888888877653 1 5789999999999999999999999862 343311 110
Q ss_pred cccceeEEEEec--ccCCCCeEEEEeeeccchHHHHHHHHHHHhCCCcEEEEEEEEecCc-----cCcceEEe
Q 024917 173 EYGKDVMEMHVG--AVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNA-----CFSSYILL 238 (260)
Q Consensus 173 e~g~~~lel~~~--~i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~~avlve~~~-----~~~e~~~L 238 (260)
....+.+++..+ ...+|++||||||+++||+|+.+++++|++.|++.+.++++++++. ...||+.+
T Consensus 76 ~~~~~~v~i~~~~~~~~~gk~VliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~k~~~~~~~i~~dy~G~ 148 (186)
T 3o7m_A 76 TETTGKVKLLKDIDVNITGKNVIVVEDIIDSGLTLHFLKDHFFMHKPKALKFCTLLDKPERRKVDLTAEYVGF 148 (186)
T ss_dssp -----CEEEEECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGGCSSCCCCSEEEE
T ss_pred CcccCcEEEEecCCCCCCcCEEEEEcCeeCCcHHHHHHHHHHHhcCCcEEEEEEEEECCCCCcCCCCCCEEEE
Confidence 011122333333 2358999999999999999999999999999999999999999984 34577654
No 28
>2geb_A Hypoxanthine-guanine phosphoribosyltransferase; HGPRT, mutant, inhibitor design, selectivity; 1.70A {Thermoanaerobacter tengcongensis}
Probab=99.71 E-value=9.3e-17 Score=136.89 Aligned_cols=128 Identities=15% Similarity=0.147 Sum_probs=95.8
Q ss_pred chhhccCHHHHHHHHHHHHHHHhc---CCccEEEeecCchhhhHHHHHHHhCCCE--EEEec-CCCCCCceeeeeeeecc
Q 024917 101 ITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKF--VPMRK-PKKLPGEVISEEYSLEY 174 (260)
Q Consensus 101 i~~ll~dp~~~~~l~~~La~~i~~---~~iDvVVgve~rG~~lA~~LA~~Lgvp~--v~iRK-~~kl~~~~~s~~y~~e~ 174 (260)
+..++.+++.+...+..|++++.+ .++|+|+|++.||+++|..+|+.+++|+ .++++ ..+ .+ + .
T Consensus 12 ~~~~l~~~~~i~~~~~~La~~i~~~~~~~~~vvv~i~~gG~~~a~~la~~l~~p~~~~~i~~~~y~-~~-~--------~ 81 (185)
T 2geb_A 12 IEEILITEEQLKAKVKELGEMITRDYEGKDLVLIGVLKGAIMFMSGLSRAIDLPLSIDFLAVSSYG-SS-T--------K 81 (185)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHTTTSCEEEEEETTTTHHHHHHHHHTCCSCCEEEEEEEEECS-TT-H--------H
T ss_pred cceEEeCHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcCcHHHHHHHHHHcCCCceeEEEEEEecC-CC-C--------c
Confidence 556788888888888888887753 2689999999999999999999999986 33432 111 00 0 0
Q ss_pred cceeEEEEec--ccCCCCeEEEEeeeccchHHHHHHHHHHHhCCCcEEEEEEEEecCcc-----CcceEEe
Q 024917 175 GKDVMEMHVG--AVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNAC-----FSSYILL 238 (260)
Q Consensus 175 g~~~lel~~~--~i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~~avlve~~~~-----~~e~~~L 238 (260)
..+.+++... ...+|++||||||+++||+|+.+++++|++.|++.+.++++++++.. ..||+.+
T Consensus 82 ~~~~~~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~~~~~~~~d~~g~ 152 (185)
T 2geb_A 82 SSGIVKIIKDHDIDIEGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKICTILDKPERREADVKVDYCGF 152 (185)
T ss_dssp HHCCEEEEECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGGCCSCCCCSEEEE
T ss_pred cCccEEEeccCCCCCCCCEEEEECCccCCHHHHHHHHHHHHhcCCCEEEEEEEEECCCcccCCCCCCEEEE
Confidence 0111222221 23589999999999999999999999999999999999999998853 2466654
No 29
>1a3c_A PYRR, pyrimidine operon regulatory protein PYRR; transcription regulation, attenuation protein, RNA-binding P pyrimidine biosynthesis; 1.60A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 1a4x_A 2igb_A* 1xz8_A* 1non_A 1xzn_A*
Probab=99.69 E-value=1.8e-16 Score=133.91 Aligned_cols=135 Identities=17% Similarity=0.184 Sum_probs=91.6
Q ss_pred echhhccCHHHHHHHHHHHHHHHhc----CCccEEEeecCchhhhHHHHHHHhC----CC--EEEEecCC-CCCCceeee
Q 024917 100 DITTLLLDTKAFRDTIDLFVERYKD----KNISVVAGIEARGFIFGPPIALAIG----AK--FVPMRKPK-KLPGEVISE 168 (260)
Q Consensus 100 Di~~ll~dp~~~~~l~~~La~~i~~----~~iDvVVgve~rG~~lA~~LA~~Lg----vp--~v~iRK~~-kl~~~~~s~ 168 (260)
|...++.+++.+......|++.+.. .++|+|+|++.|||++|..+|+.++ +| +..+++.. +-.......
T Consensus 2 ~~~~~l~~~~~i~~~~~~la~~i~~~~~~~~~~~iv~i~~~G~~~a~~la~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~ 81 (181)
T 1a3c_A 2 NQKAVILDEQAIRRALTRIAHEMIERNKGMNNCILVGIKTRGIYLAKRLAERIEQIEGNPVTVGEIDITLYRDDLSKKTS 81 (181)
T ss_dssp -CEEEEECHHHHHHHHHHHHHHHHHHCC----CEEEEESHHHHHHHHHHHHHHHHHHSSCCEEEEEEEECCC--------
T ss_pred CcccCccCHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcCCCHHHHHHHHHHHhHHhCCCcccCeEEEEEecCcccccCc
Confidence 3455778898888888888877754 2689999999999999999999998 44 33333311 101100000
Q ss_pred eeeecccceeEEEEecccCCCCeEEEEeeeccchHHHHHHHHHHHhCC-CcEEEEEEEEecCc----cCcceEEe
Q 024917 169 EYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQ-NHIFILICIQMLNA----CFSSYILL 238 (260)
Q Consensus 169 ~y~~e~g~~~lel~~~~i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~G-a~vV~~avlve~~~----~~~e~~~L 238 (260)
.. ..-...+.+ ....+|++||||||++|||+|+.+++++|+++| ++.+.++++++++. ..+||++.
T Consensus 82 ~~--~~~~~~~~~--~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~G~a~~V~~~~l~~k~~~~~~~~~dy~g~ 152 (181)
T 1a3c_A 82 ND--EPLVKGADI--PVDITDQKVILVDDVLYTGRTVRAGMDALVDVGRPSSIQLAVLVDRGHRELPIRADYIGK 152 (181)
T ss_dssp CC--CCEEEEEEC--SSCCTTSEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECCCCSSSCCCSEEEE
T ss_pred cc--eeeeccccc--CcCCCCCEEEEEeCccCcHHHHHHHHHHHHhcCCCcEEEEEEEEccCCCcCCCCccEEEE
Confidence 00 000011111 122589999999999999999999999999997 99999999998873 34577765
No 30
>1pzm_A HGPRT, hypoxanthine-guanine phosphoribosyltransferase; HET: 5GP; 2.10A {Leishmania tarentolae} SCOP: c.61.1.1
Probab=99.69 E-value=2.3e-16 Score=137.60 Aligned_cols=132 Identities=13% Similarity=0.129 Sum_probs=95.6
Q ss_pred EechhhccCHHHHHHHHHHHHHHHhc---------CCccEEEeecCchhhhHHHHHHHh---CCCE--EEEecCCCCCCc
Q 024917 99 QDITTLLLDTKAFRDTIDLFVERYKD---------KNISVVAGIEARGFIFGPPIALAI---GAKF--VPMRKPKKLPGE 164 (260)
Q Consensus 99 ~Di~~ll~dp~~~~~l~~~La~~i~~---------~~iDvVVgve~rG~~lA~~LA~~L---gvp~--v~iRK~~kl~~~ 164 (260)
.|+..++.+++.+....+.|++.+.+ .+.++|+|++.||+++|..+|+.+ ++|+ ..+++...- ..
T Consensus 21 ~di~~~l~~~~~i~~~~~~La~~i~~~~~~~~~~~~~~~vvvgi~~gG~~~a~~la~~L~~~~~p~~~~~i~~~~y~-~~ 99 (211)
T 1pzm_A 21 PMSARTLVTQEQVWAATAKCAKKIAADYKDFHLTADNPLYLLCVLKGSFIFTADLARFLADEGVPVKVEFICASSYG-SG 99 (211)
T ss_dssp TTEEEEEECHHHHHHHHHHHHHHHHHHHGGGTCBTTBCEEEEEETTTTHHHHHHHHHHHHHTTCCEEEEEEBCC------
T ss_pred cccceEEeCHHHHHHHHHHHHHHHHHhcccccccCCCCCEEEEEccchHHHHHHHHHHHhhcCCCceeeeEEeeecc-Cc
Confidence 36778889998888777777766542 357899999999999999999999 9994 344432110 00
Q ss_pred eeeeeeeecccceeEEEEec--ccCCCCeEEEEeeeccchHHHHHHHHHHHhCCCcEEEEEEEEecCc-----cCcceEE
Q 024917 165 VISEEYSLEYGKDVMEMHVG--AVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNA-----CFSSYIL 237 (260)
Q Consensus 165 ~~s~~y~~e~g~~~lel~~~--~i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~~avlve~~~-----~~~e~~~ 237 (260)
+ .+ .+.+++..+ ...+|++||||||+++||+|+.+++++|+++|++.+.++++++++. ...||+.
T Consensus 100 ~-------~~-~~~~~~~~~~~~~v~gk~VllVDDvi~TG~Tl~aa~~~L~~~Ga~~V~v~~l~~k~~~~~~~~~~d~~g 171 (211)
T 1pzm_A 100 V-------ET-SGQVRMLLDVRDSVENRHIMLVEDIVDSAITLQYLMRFMLAKKPASLKTVVLLDKPSGRKVDVLVDYPV 171 (211)
T ss_dssp ----------------CCBCCSSCCTTCEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGGCSSCCCCSEEE
T ss_pred c-------cc-CCceEEeccCCCCCCCCEEEEECCccccHHHHHHHHHHHHhcCCCEEEEEEEEecCccCcCCCCCCEEE
Confidence 0 00 011111111 2248999999999999999999999999999999999999999885 2357766
Q ss_pred ee
Q 024917 238 LF 239 (260)
Q Consensus 238 L~ 239 (260)
+-
T Consensus 172 ~~ 173 (211)
T 1pzm_A 172 IT 173 (211)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 31
>1yfz_A Hypoxanthine-guanine phosphoribosyltransferase; protein-nucleotide complex; HET: IMP; 2.20A {Thermoanaerobacter tengcongensis} SCOP: c.61.1.1 PDB: 1r3u_A*
Probab=99.69 E-value=2.3e-16 Score=136.48 Aligned_cols=129 Identities=15% Similarity=0.137 Sum_probs=94.7
Q ss_pred chhhccCHHHHHHHHHHHHHHHhc---CCccEEEeecCchhhhHHHHHHHhCCCE--EEEecCCCCCCceeeeeeeeccc
Q 024917 101 ITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKF--VPMRKPKKLPGEVISEEYSLEYG 175 (260)
Q Consensus 101 i~~ll~dp~~~~~l~~~La~~i~~---~~iDvVVgve~rG~~lA~~LA~~Lgvp~--v~iRK~~kl~~~~~s~~y~~e~g 175 (260)
+..++.+++.+...+..|++.+.+ .++|+|+|++.||+++|..+|+.+|+|+ ..+++...- ... ..
T Consensus 32 ~~~~l~~~~~i~~~~~~La~~i~~~~~~~~~viv~v~~gG~~~a~~la~~l~~p~~~~~~~~~~y~-~~~--------~~ 102 (205)
T 1yfz_A 32 IEEILITEEQLKAKVKELGEMITRDYEGKDLVLIGVLKGAIMFMSGLSRAIDLPLSIDFLAVSSYG-SST--------KS 102 (205)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHTTTSCEEEEEETTTHHHHHHHHHHTCCSCCEEEEEEEEECS-HHH--------HH
T ss_pred cceEEcCHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcCCHHHHHHHHHHhCCCceeEEEEEEecc-CCc--------cc
Confidence 445678888888888888877753 2589999999999999999999999995 233321100 000 00
Q ss_pred ceeEEEEec--ccCCCCeEEEEeeeccchHHHHHHHHHHHhCCCcEEEEEEEEecCcc-----CcceEEe
Q 024917 176 KDVMEMHVG--AVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNAC-----FSSYILL 238 (260)
Q Consensus 176 ~~~lel~~~--~i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~~avlve~~~~-----~~e~~~L 238 (260)
.+..++... ...+|++||||||+++||+|+.+++++|++.|++.|.++++++++.. ..||+.+
T Consensus 103 ~~~~~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~~~~~~~~d~~g~ 172 (205)
T 1yfz_A 103 SGIVKIIKDHDIDIEGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKICTILDKPERREADVKVDYCGF 172 (205)
T ss_dssp HCCEEEEECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGGCCSCCCCSEEEE
T ss_pred cceEEEeccCCCCCCcCEEEEECCccCcHHHHHHHHHHHHhcCCCEEEEEEEEecCccccCCCCCCEEEE
Confidence 111222221 23589999999999999999999999999999999999999998853 2466654
No 32
>1nul_A XPRT, xanthine-guanine phosphoribosyltransferase; purine salvage enzym; 1.80A {Escherichia coli} SCOP: c.61.1.1 PDB: 1a96_A* 1a95_A 1a98_A 1a97_A*
Probab=99.68 E-value=2.4e-16 Score=130.65 Aligned_cols=119 Identities=16% Similarity=0.196 Sum_probs=90.8
Q ss_pred hccCHHHHHHHHHHHHHHHhc-CCccEEEeecCchhhhHHHHHHHhCCC-EEEEecCCCCCCceeeeeeeecccceeEEE
Q 024917 104 LLLDTKAFRDTIDLFVERYKD-KNISVVAGIEARGFIFGPPIALAIGAK-FVPMRKPKKLPGEVISEEYSLEYGKDVMEM 181 (260)
Q Consensus 104 ll~dp~~~~~l~~~La~~i~~-~~iDvVVgve~rG~~lA~~LA~~Lgvp-~v~iRK~~kl~~~~~s~~y~~e~g~~~lel 181 (260)
++.+++.++..++.|++++.+ .+.|+|+|++.||+++|..+|+.||+| +.+++.... . .++.+.+++
T Consensus 5 ~l~~~~~i~~~~~~La~~i~~~~~~~~vvgi~~Gg~~~a~~la~~l~~~~~~~i~~~~y----------~-~~~~~~~~~ 73 (152)
T 1nul_A 5 YIVTWDMLQIHARKLASRLMPSEQWKGIIAVSRGGLVPGALLARELGIRHVDTVCISSY----------D-HDNQRELKV 73 (152)
T ss_dssp EECCHHHHHHHHHHHHHHHCSGGGCSEEEEEETTTHHHHHHHHHHHTCCCEEEEEEEC-------------------CEE
T ss_pred EecCHHHHHHHHHHHHHHHHHHcCCCEEEEEcCCCHHHHHHHHHHcCCCcceEEEEEEe----------c-CcccceEEE
Confidence 578899999999999998875 457899999999999999999999999 655542111 0 011112233
Q ss_pred EecccCCCCeEEEEeeeccchHHHHHHHHHHHhCCCcEEEEEEEEecCc--cCcceEEe
Q 024917 182 HVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNA--CFSSYILL 238 (260)
Q Consensus 182 ~~~~i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~~avlve~~~--~~~e~~~L 238 (260)
..+...+|++||||||+++||+|+.++++.|++ ++++++++++. ..+||+..
T Consensus 74 ~~~~~~~gk~VliVDDii~TG~Tl~~a~~~l~~-----v~~a~L~~k~~~~~~pDy~~~ 127 (152)
T 1nul_A 74 LKRAEGDGEGFIVIDDLVDTGGTAVAIREMYPK-----AHFVTIFAKPAGRPLVDDYVV 127 (152)
T ss_dssp EECCSSCCTTEEEEEEEECTTSSHHHHHHHCTT-----SEEEEEEECGGGGGGCSEEEE
T ss_pred ecCCCCCcCEEEEEEeecCchHHHHHHHHHHhh-----CCEEEEEECCCCccCCcEEEE
Confidence 333335899999999999999999999999987 78899999985 34677664
No 33
>1tc1_A Protein (hypoxanthine phosphoribosyltransferase); transferase,phosphoribosyltransferase, purine salvage, nucleotide metabolism; HET: FMB MES; 1.41A {Trypanosoma cruzi} SCOP: c.61.1.1 PDB: 1tc2_A* 1p19_A* 1p18_A* 1p17_A* 1i0l_A* 1i14_A* 1i0i_A* 1i13_A*
Probab=99.66 E-value=1.1e-15 Score=134.56 Aligned_cols=130 Identities=15% Similarity=0.160 Sum_probs=95.1
Q ss_pred echhhccCHHHHHHHHHHHHHHHhc---CCc-------cEEEeecCchhhhHHHHHHHh---CCCE--EEEec-CCCCCC
Q 024917 100 DITTLLLDTKAFRDTIDLFVERYKD---KNI-------SVVAGIEARGFIFGPPIALAI---GAKF--VPMRK-PKKLPG 163 (260)
Q Consensus 100 Di~~ll~dp~~~~~l~~~La~~i~~---~~i-------DvVVgve~rG~~lA~~LA~~L---gvp~--v~iRK-~~kl~~ 163 (260)
|+..++.+++.+...++.|++.+.+ .+. ++|+|++.||+++|..+|+.+ |+|+ .++++ ....
T Consensus 6 di~~~li~~~~i~~~~~~La~~I~~~~~~~~~~~~~p~~vVv~v~~gG~~~a~~La~~L~~~~~p~~~~~l~~~~y~~-- 83 (220)
T 1tc1_A 6 FAEKILFTEEEIRTRIKEVAKRIADDYKGKGLRPYVNPLVLISVLKGSFMFTADLCRALCDFNVPVRMEFICVSSYGE-- 83 (220)
T ss_dssp TSCCEEECHHHHHHHHHHHHHHHHHHHTTSCCBTTTBCEEEEEETTTTHHHHHHHHHHHHHTTCCEEEEEEEEECC----
T ss_pred ccccEeeCHHHHHHHHHHHHHHHHHHccCcccccCCCCeEEEEeccCCHHHHHHHHHHHHhcCCCccccEEEEeecCC--
Confidence 5777889999888888888776642 123 899999999999999999999 9994 33432 1110
Q ss_pred ceeeeeeeecccceeEEEEe--cccCCCCeEEEEeeeccchHHHHHHHHHHHhCCCcEEEEEEEEecCc-----cCcceE
Q 024917 164 EVISEEYSLEYGKDVMEMHV--GAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNA-----CFSSYI 236 (260)
Q Consensus 164 ~~~s~~y~~e~g~~~lel~~--~~i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~~avlve~~~-----~~~e~~ 236 (260)
.+. ..+.+.+.. ....+|++||||||+++||+|+.+++++|++.|++.|.++++++++. ...+|+
T Consensus 84 ~~~--------~~~~v~~~~~~~~~v~Gk~VLLVDDii~TG~Tl~~a~~~L~~~Ga~~V~v~~l~~k~~~~~~~~~~dy~ 155 (220)
T 1tc1_A 84 GLT--------SSGQVRMLLDTRHSIEGHHVLIVEDIVDTALTLNYLYHMYFTRRPASLKTVVLLDKREGRRVPFSADYV 155 (220)
T ss_dssp ---------------CEEEECCSSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECTTCCSSCCCCSEE
T ss_pred Ccc--------cCCcEEEecCCCccCCCCEEEEEeCccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCccCcCCCCCCEE
Confidence 000 011122221 12248999999999999999999999999999999999999999885 235777
Q ss_pred Eee
Q 024917 237 LLF 239 (260)
Q Consensus 237 ~L~ 239 (260)
++-
T Consensus 156 g~~ 158 (220)
T 1tc1_A 156 VAN 158 (220)
T ss_dssp EEE
T ss_pred EEE
Confidence 653
No 34
>2ywu_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 2ywt_A* 2yws_A* 3acb_A 3acc_A* 3acd_A*
Probab=99.64 E-value=2.9e-15 Score=128.07 Aligned_cols=126 Identities=14% Similarity=0.136 Sum_probs=90.6
Q ss_pred hccCHHHHHHHHHHHHHHHhc---CCccEEEeecCchhhhHHHHHHHhCCCEE--EEecCCCCCCceeeeeeeeccccee
Q 024917 104 LLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKFV--PMRKPKKLPGEVISEEYSLEYGKDV 178 (260)
Q Consensus 104 ll~dp~~~~~l~~~La~~i~~---~~iDvVVgve~rG~~lA~~LA~~Lgvp~v--~iRK~~kl~~~~~s~~y~~e~g~~~ 178 (260)
++.+++.++...+.|++++.+ .+.++|+|++.+|+++|..+|+.+++|+. +++....- ... ...+.
T Consensus 12 ~li~~~~i~~~i~~La~~I~~~~~~~~~vvVgi~~gg~~~a~~la~~L~~p~~~~~i~~~~y~-~~~--------~~~~~ 82 (181)
T 2ywu_A 12 VQISAEAIKKRVEELGGEIARDYQGKTPHLICVLNGAFIFMADLVRAIPLPLTMDFIAISSYG-NAF--------KSSGE 82 (181)
T ss_dssp CCBCHHHHHHHHHHHHHHHHHHTTTCCCEEEEEETTTHHHHHHHHTTCCSCCEEEEEEEC--------------------
T ss_pred EEECHHHHHHHHHHHHHHHHHHcCCCCCEEEEECchhHHHHHHHHHHcCCCceEEEEEEEEec-CCc--------cccCc
Confidence 567888888777777776653 15789999999999999999999999952 34321100 000 00111
Q ss_pred EEEEe--cccCCCCeEEEEeeeccchHHHHHHHHHHHhCCCcEEEEEEEEecCcc-----CcceEEe
Q 024917 179 MEMHV--GAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNAC-----FSSYILL 238 (260)
Q Consensus 179 lel~~--~~i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~~avlve~~~~-----~~e~~~L 238 (260)
+++.. ....+|++||||||+++||+|+.++++.|++.|++.+.++++++++.. ..||+.+
T Consensus 83 v~i~~~~~~~~~gk~vliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~k~~~~~~~~~~d~~g~ 149 (181)
T 2ywu_A 83 VELLKDLRLPIHGRDVIVVEDIVDTGLTLSYLLDYLEARKPASVRVAALLSKPSRRQVEVPIHYLGF 149 (181)
T ss_dssp -CEEECCCSCCTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEECGGGCSSCCCCSEEEE
T ss_pred EEEEecCCCCCCCCEEEEECCeeCChHHHHHHHHHHHhcCCcEEEEEEEEECCCCccCCCCCCEEEE
Confidence 22221 123589999999999999999999999999999999999999999752 3466554
No 35
>3ohp_A Hypoxanthine phosphoribosyltransferase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Vibrio cholerae} SCOP: c.61.1.1 PDB: 1g9s_A* 1g9t_A* 1grv_A 1j7j_A
Probab=99.64 E-value=4e-15 Score=126.82 Aligned_cols=127 Identities=13% Similarity=0.173 Sum_probs=91.2
Q ss_pred hhccCHHHHHHHHHHHHHHHhc-C--Cc-cEEEeecCchhhhHHHHHHHhCCCE--EEEecCCCCCCceeeeeeeecccc
Q 024917 103 TLLLDTKAFRDTIDLFVERYKD-K--NI-SVVAGIEARGFIFGPPIALAIGAKF--VPMRKPKKLPGEVISEEYSLEYGK 176 (260)
Q Consensus 103 ~ll~dp~~~~~l~~~La~~i~~-~--~i-DvVVgve~rG~~lA~~LA~~Lgvp~--v~iRK~~kl~~~~~s~~y~~e~g~ 176 (260)
.++.+++.++...+.|++++.+ . +. ++|+|++.+|+++|..+|+.+++|+ .++++...- ..+ +..
T Consensus 6 ~~l~s~~~i~~~i~~La~~I~~~~~~~~~~vvVgi~~gG~~~a~~la~~L~~~~~~~~i~~~~y~-~~~--------~~~ 76 (177)
T 3ohp_A 6 EVMISEQEVAQRIRELGQQITEHYQGSSDLVLVGLLRGSFVFMADLARQIHLTHQVDFMTASSYG-NSM--------QSS 76 (177)
T ss_dssp EEEECHHHHHHHHHHHHHHHHHHTTTCSCEEEEEETTTTHHHHHHHHHTCCSCCEEEEEEECC-----------------
T ss_pred EEeeCHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECcchHHHHHHHHHHcCCCceEEEEEEEEEc-CCC--------ccC
Confidence 3567777777777777766543 1 24 8999999999999999999999985 344432110 000 011
Q ss_pred eeEEEEec--ccCCCCeEEEEeeeccchHHHHHHHHHHHhCCCcEEEEEEEEecCc-----cCcceEEe
Q 024917 177 DVMEMHVG--AVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNA-----CFSSYILL 238 (260)
Q Consensus 177 ~~lel~~~--~i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~~avlve~~~-----~~~e~~~L 238 (260)
+.+++..+ ...+|++||||||+++||+|+.++++.|++.|++.+.++++++++. ...||+.+
T Consensus 77 ~~v~i~~~~~~~~~gk~vliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~~~~~~~~~~~~d~~g~ 145 (177)
T 3ohp_A 77 RDVRILKDLDDDIKGKDVLLVEDIIDTGNTLNKVKEILALREPKSIRICTLLDKPTRREVDVEVNWVGF 145 (177)
T ss_dssp CCCCEEECCSSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGGCSSCCCCSEEEE
T ss_pred CcEEEecCCCcccCCCEEEEEeeEeCcHHHHHHHHHHHHhcCCcEEEEEEEEECCccccCCCCccEEEE
Confidence 11222222 2248999999999999999999999999999999999999999974 34577665
No 36
>1ufr_A TT1027, PYR mRNA-binding attenuation protein; pyrimidine nucleotide biosynthesis, transcriptional attenuation, RNA-binding protein; 2.60A {Thermus thermophilus} SCOP: c.61.1.1
Probab=99.61 E-value=6.4e-15 Score=124.64 Aligned_cols=130 Identities=15% Similarity=0.139 Sum_probs=88.1
Q ss_pred hccCHHHHHHHHHHHHHHHhc----CCccEEEeecCchhhhHHHHHHHhC----CCEE--EEecCCCCCCceeeeeeeec
Q 024917 104 LLLDTKAFRDTIDLFVERYKD----KNISVVAGIEARGFIFGPPIALAIG----AKFV--PMRKPKKLPGEVISEEYSLE 173 (260)
Q Consensus 104 ll~dp~~~~~l~~~La~~i~~----~~iDvVVgve~rG~~lA~~LA~~Lg----vp~v--~iRK~~kl~~~~~s~~y~~e 173 (260)
++.+++.+......++..+.. .+.++|++++.|||++|..+|+.++ +|+. .+++.... ....+.. ..
T Consensus 6 ~l~~~~~i~~~~~~La~~i~~~~~~~~~~~iv~v~~rG~~~a~~la~~l~~~~~~~~~~~~l~~~~~~-~~~~~~~--~~ 82 (181)
T 1ufr_A 6 ELMNAPEMRRALYRIAHEIVEANKGTEGLALVGIHTRGIPLAHRIARFIAEFEGKEVPVGVLDITLYR-DDLTEIG--YR 82 (181)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHHTSSTTEEEEEETTTHHHHHHHHHHHHHHHHCSCCCEEEEEEEC--------------
T ss_pred eecCHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECCCChHHHHHHHHHHhHHhCCCcccCeEEEEEec-Ccccccc--cc
Confidence 566777777777777766542 2467999999999999999999987 7752 33321100 0000000 00
Q ss_pred ccceeEEEEecccCCCCeEEEEeeeccchHHHHHHHHHHHhCC-CcEEEEEEEEecCc----cCcceEEe
Q 024917 174 YGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQ-NHIFILICIQMLNA----CFSSYILL 238 (260)
Q Consensus 174 ~g~~~lel~~~~i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~G-a~vV~~avlve~~~----~~~e~~~L 238 (260)
.....+.+ ....+|++|||||||+|||+|+.+++++|+++| ++.+.++++++++. ...||++.
T Consensus 83 ~~~~~~~~--~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~G~a~~V~~~~l~~~~~~~~~~~~d~~g~ 150 (181)
T 1ufr_A 83 PQVRETRI--PFDLTGKAIVLVDDVLYTGRTARAALDALIDLGRPRRIYLAVLVDRGHRELPIRADFVGK 150 (181)
T ss_dssp CEEEEEEE--CSCCTTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECCCCSSSBCCSEEEE
T ss_pred ceeccccc--CcCCCCCEEEEEecCCCcHHHHHHHHHHHHhcCCCcEEEEEEEEcCCCCcCCccCcEEEE
Confidence 00011222 122489999999999999999999999999999 99999999999873 33566664
No 37
>1wd5_A Hypothetical protein TT1426; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: MES; 2.00A {Thermus thermophilus} SCOP: c.61.1.1
Probab=99.60 E-value=5.2e-15 Score=128.07 Aligned_cols=128 Identities=19% Similarity=0.165 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHHhcCCccEEEeecCchhhhHHHHHHHhCCCEEE--EecCCCCCCceeeeeeeecccc-----------
Q 024917 110 AFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVP--MRKPKKLPGEVISEEYSLEYGK----------- 176 (260)
Q Consensus 110 ~~~~l~~~La~~i~~~~iDvVVgve~rG~~lA~~LA~~Lgvp~v~--iRK~~kl~~~~~s~~y~~e~g~----------- 176 (260)
+.+.+++.+.+ +. .+.|+|++++.+|+++|..+|+.+|+|+.+ +||.++...+-....-..+.+.
T Consensus 9 a~~~La~~i~~-~~-~~~~vVv~v~rGg~~~A~~la~~l~~p~~~~~~rk~~~~~~~e~~~ga~s~~g~~~~~~~~~~~~ 86 (208)
T 1wd5_A 9 AGALLAEALAP-LG-LEAPVVLGLPRGGVVVADEVARRLGGELDVVLVRKVGAPGNPEFALGAVGEGGELVLMPYALRYA 86 (208)
T ss_dssp HHHHHHHHHGG-GC-CCSCEEEECTTHHHHHHHHHHHHHTCEEEECCEEEEEETTEEEEEEEEEETTCCEEECTTHHHHS
T ss_pred HHHHHHHHHHh-cC-CCCCEEEEECCCCHHHHHHHHHHhCCCeEEEEEEEecCCCCchhhcceecCCCcEEechhhhccc
Confidence 44445544422 22 357899999999999999999999999865 5554321100000000000010
Q ss_pred --eeEE-------------------EEecccCCCCeEEEEeeeccchHHHHHHHHHHHhCCCcEEEEEEEEecCc-----
Q 024917 177 --DVME-------------------MHVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNA----- 230 (260)
Q Consensus 177 --~~le-------------------l~~~~i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~~avlve~~~----- 230 (260)
+.++ .......+|++||||||+++||+|+.++++.|++.|++.|.+++++..++
T Consensus 87 ~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga~~V~v~~~v~~~~~~~~l 166 (208)
T 1wd5_A 87 DQSYLEREAARQRDVLRKRAERYRRVRPKAARKGRDVVLVDDGVATGASMEAALSVVFQEGPRRVVVAVPVASPEAVERL 166 (208)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCTTSEEEEECSCBSSCHHHHHHHHHHHTTCCSEEEEEEEEBCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCEEEEECCCccHHHHHHHHHHHHHHcCCCEEEEEEEEcCHHHHHHh
Confidence 0000 00012248999999999999999999999999999999999999998864
Q ss_pred --cCcceEEeee
Q 024917 231 --CFSSYILLFS 240 (260)
Q Consensus 231 --~~~e~~~L~~ 240 (260)
.. +|+++..
T Consensus 167 ~~~~-~~v~~~~ 177 (208)
T 1wd5_A 167 KARA-EVVALSV 177 (208)
T ss_dssp HTTS-EEEEEEC
T ss_pred cccC-cEEEEec
Confidence 22 6666544
No 38
>2xbu_A Hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage, FLIP pepti; HET: 5GP; 1.80A {Saccharomyces cerevisiae} PDB: 2jkz_A* 2jky_A*
Probab=99.58 E-value=4.1e-14 Score=124.46 Aligned_cols=126 Identities=17% Similarity=0.169 Sum_probs=87.3
Q ss_pred hhccCHHHHHHHHHHHHHHHhcCCccEEEeecCchhhhHHHHHHHhCC------CEEEEecC-CCCCCceeeeeeeeccc
Q 024917 103 TLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGA------KFVPMRKP-KKLPGEVISEEYSLEYG 175 (260)
Q Consensus 103 ~ll~dp~~~~~l~~~La~~i~~~~iDvVVgve~rG~~lA~~LA~~Lgv------p~v~iRK~-~kl~~~~~s~~y~~e~g 175 (260)
.++.+.+.++..++.|+..+.+.++|+|+|++.||+++|..||+.|++ |+.+++.. ..-.+. .... ....+
T Consensus 6 ~~~is~~~i~~~i~~LA~~I~~~~~~vIVgI~~GG~~~A~~La~~L~~~~~~~lpi~~i~~s~y~~~~~-~~~~-~~~~g 83 (221)
T 2xbu_A 6 KQYISYNNVHQLCQVSAERIKNFKPDLIIAIGGGGFIPARILRTFLKEPGVPTIRIFAIILSLYEDLNS-VGSE-VEEVG 83 (221)
T ss_dssp CEECCHHHHHHHHHHHHHHHTTTCCSEEEEEHHHHHHHHHHHHHHHCCTTSCCCEEEEEEEEEEC---------------
T ss_pred eEecCHHHHHHHHHHHHHHhccCCCCEEEEECCCcHHHHHHHHHHhCCCCCCCccEEEEEEEEecCCcc-cccc-ccccC
Confidence 456778888888999999886667899999999999999999999998 33333311 000000 0000 00001
Q ss_pred ceeEE---EE---ecccCCCCeEEEEeeeccchHHHHHHHHHHHh--------CCC---------cEEEEEEEEecCc
Q 024917 176 KDVME---MH---VGAVQAGERALIVDDLVATGGTLSAAIRLLGS--------FQN---------HIFILICIQMLNA 230 (260)
Q Consensus 176 ~~~le---l~---~~~i~~GkrVLIVDDVltTG~Tl~aa~~LL~~--------~Ga---------~vV~~avlve~~~ 230 (260)
...+. +. .....+|++||||||+++||+||.+++++|++ .|+ +.+.+++|++++.
T Consensus 84 ~~~~~~~~~~~~~~~~~v~Gk~VLIVDDIidTG~Tl~aa~~~L~~~ga~~~~~~g~~~~~~~~~~~~v~iavL~~K~~ 161 (221)
T 2xbu_A 84 VKVSRTQWIDYEQCKLDLVGKNVLIVDEVDDTRTTLHYALSELEKDAAEQAKAKGIDTEKSPEMKTNFGIFVLHDKQK 161 (221)
T ss_dssp CEEEEEECCCHHHHTCCCTTCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHTTCCTTTCGGGSCEEEEEEEEEECS
T ss_pred ceeeeeeeeecccccccCCCCEEEEEeccCCcHHHHHHHHHHHHhhcchhhhhcCccccccccCcceEEEEEEEeccc
Confidence 11111 10 02235899999999999999999999999997 786 5899999999974
No 39
>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A*
Probab=99.58 E-value=1.5e-14 Score=132.12 Aligned_cols=100 Identities=26% Similarity=0.361 Sum_probs=81.2
Q ss_pred HHHHHHHhcCCccEEEeecCchhhhHHHHHHHhCCCEEEEecCCCCCCceeeeeeeecccceeEEEEe-cccCCCCeEEE
Q 024917 116 DLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHV-GAVQAGERALI 194 (260)
Q Consensus 116 ~~La~~i~~~~iDvVVgve~rG~~lA~~LA~~Lgvp~v~iRK~~kl~~~~~s~~y~~e~g~~~lel~~-~~i~~GkrVLI 194 (260)
..|++++++.+.++|++++.||+++|..+|+.||+|+.+++|+++.++ .+++.. ....+|++|||
T Consensus 143 ~~la~~i~~~~~~vVV~pd~Gg~~~A~~lA~~L~~p~~~i~K~r~~~g--------------~v~i~~~~~dv~gk~vli 208 (286)
T 3lrt_A 143 DAIVRYYKNVDVDYVVSPDDGGLARVADISAKLGKKHFFIEKKRIDDR--------------TVEMKVPNVDVNGKKLLI 208 (286)
T ss_dssp HHHHHHHTTSCCSEEEESSSSSHHHHHHHHHHHTCEEEEEEEEEETTE--------------EEEEEESCCCCTTCEEEE
T ss_pred HHHHHHHHhcCCCEEEEECCCccHHHHHHHHHhCCCeEEEeeeecCCC--------------cEEEeeccccCCcCEEEE
Confidence 344555555678999999999999999999999999999988664222 122221 22248999999
Q ss_pred EeeeccchHHHHHHHHHHHhCCCcEEEEEEEEecC
Q 024917 195 VDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLN 229 (260)
Q Consensus 195 VDDVltTG~Tl~aa~~LL~~~Ga~vV~~avlve~~ 229 (260)
|||+++||+|+.+++++|++.|++.+++++....-
T Consensus 209 VDDii~TG~Tl~~a~~~L~~~Ga~~v~~~~th~v~ 243 (286)
T 3lrt_A 209 VDDIISTGGTIAKSSGLLREKGASKIYVSAVHGLF 243 (286)
T ss_dssp EEEEESSCHHHHHHHHHHHHTTCSEEEEEEEEECC
T ss_pred EeccccccHHHHHHHHHHHhCCCCEEEEEEEEeec
Confidence 99999999999999999999999999999988764
No 40
>1w30_A PYRR bifunctional protein; transferase, glycosyltransferase, PSI, protein structure initiative, TB structural genomics consortium, TB; 1.9A {Mycobacterium tuberculosis} SCOP: c.61.1.1
Probab=99.57 E-value=2.3e-14 Score=124.07 Aligned_cols=131 Identities=15% Similarity=0.161 Sum_probs=89.3
Q ss_pred hhhccCHHHHHHHHHHHHHHHhc-----------CCccEEEeecCchhhhHHHHHHHh----CCCE--EEEecC-CCCCC
Q 024917 102 TTLLLDTKAFRDTIDLFVERYKD-----------KNISVVAGIEARGFIFGPPIALAI----GAKF--VPMRKP-KKLPG 163 (260)
Q Consensus 102 ~~ll~dp~~~~~l~~~La~~i~~-----------~~iDvVVgve~rG~~lA~~LA~~L----gvp~--v~iRK~-~kl~~ 163 (260)
..++.+++.++...+.|+..+.+ .+.++|+|++.|||++|..+|+.| |+|+ ..+++. .+- .
T Consensus 13 ~~~l~~~~~i~~~i~~La~~i~~~~~~~~~~~~~~~~~vvvgi~~gG~~~a~~La~~L~~~~g~p~~~~~l~~~~y~~-~ 91 (201)
T 1w30_A 13 SRELMSAANVGRTISRIAHQIIEKTALDDPVGPDAPRVVLLGIPTRGVTLANRLAGNITEYSGIHVGHGALDITLYRD-D 91 (201)
T ss_dssp EEEEECHHHHHHHHHHHHHHHHHHTTTTSCCBTTBCCEEEEECTTHHHHHHHHHHHHHHHHHSCCCEEEECCCGGGCC--
T ss_pred ceEEeCHHHHHHHHHHHHHHHHHHccccccccccCCCcEEEEEcccHHHHHHHHHHHHhHHHCCCcccceEEEEEecC-C
Confidence 34678888888777777765532 256799999999999999999999 5764 222221 110 0
Q ss_pred ceeeeeeeecccceeEEEEecccCCCCeEEEEeeeccchHHHHHHHHHHHhCC-CcEEEEEEEEecCcc----CcceEEe
Q 024917 164 EVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQ-NHIFILICIQMLNAC----FSSYILL 238 (260)
Q Consensus 164 ~~~s~~y~~e~g~~~lel~~~~i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~G-a~vV~~avlve~~~~----~~e~~~L 238 (260)
..... ......+.+. ....+|++|||||||++||+|+.+++++|++.| ++.+.++++++++.. ..||+.+
T Consensus 92 ~~~~~----~~~~~~~~~~-~~~~~gk~VlLVDDVitTG~Tl~aa~~~L~~~G~a~~V~vavlv~k~~~~~pi~~dy~g~ 166 (201)
T 1w30_A 92 LMIKP----PRPLASTSIP-AGGIDDALVILVDDVLYSGRSVRSALDALRDVGRPRAVQLAVLVDRGHRELPLRADYVGK 166 (201)
T ss_dssp -----------CCCCCBCC-TTCSTTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECCCCSSSBCCSEEEE
T ss_pred ccccc----cceeecccCC-CccCCCCEEEEECCccchHHHHHHHHHHHHhCCCCcEEEEEEEEecCCCcCCCCCcEEEE
Confidence 00000 0000001111 122589999999999999999999999999999 999999999999652 3466554
No 41
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*
Probab=99.47 E-value=1.5e-13 Score=125.05 Aligned_cols=101 Identities=22% Similarity=0.342 Sum_probs=74.9
Q ss_pred HHHHHHHHhc-CCccEEEeecCchhhhHHHHHHHhCCCEEEEecCCCCCCceeeeeeeecccceeEEEEecccCCCCeEE
Q 024917 115 IDLFVERYKD-KNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERAL 193 (260)
Q Consensus 115 ~~~La~~i~~-~~iDvVVgve~rG~~lA~~LA~~Lgvp~v~iRK~~kl~~~~~s~~y~~e~g~~~lel~~~~i~~GkrVL 193 (260)
+..|++++.+ .+.++|++++.+|+.+|..+|+.+|+|+.+++|.++.+. ...+.+. +...+|++||
T Consensus 143 ~~~La~~i~~~~~~~vVv~pd~Gg~~~a~~la~~l~~p~~~i~k~r~~~~------------~~~~~l~-g~~v~Gk~Vl 209 (284)
T 1u9y_A 143 VPKLAEYVKDKLNDPIVLAPDKGALEFAKTASKILNAEYDYLEKTRLSPT------------EIQIAPK-TLDAKDRDVF 209 (284)
T ss_dssp HHHHHHHHTTTCSSCEEEESSGGGHHHHHHHHHHHTCCEEEBC----------------------CCBS-SCCCTTCCEE
T ss_pred HHHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHhCCCEEEEEEEEcCCC------------eEEEEec-CccCCCCEEE
Confidence 4445555543 357799999999999999999999999988887664221 0111121 2135899999
Q ss_pred EEeeeccchHHHHHHHHHHHhCCCcEEEEEEEEec
Q 024917 194 IVDDLVATGGTLSAAIRLLGSFQNHIFILICIQML 228 (260)
Q Consensus 194 IVDDVltTG~Tl~aa~~LL~~~Ga~vV~~avlve~ 228 (260)
||||+++||+|+.+++++|++.|++.+.++++...
T Consensus 210 IVDDii~TG~Tl~~aa~~Lk~~Ga~~V~~~~~h~v 244 (284)
T 1u9y_A 210 IVDDIISTGGTMATAVKLLKEQGAKKIIAACVHPV 244 (284)
T ss_dssp EEEEECSSSHHHHHHHHHHHHTTCCSEEEEEEECC
T ss_pred EEecccCchHHHHHHHHHHHHCCCcEEEEEEEeEe
Confidence 99999999999999999999999999999887544
No 42
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=99.46 E-value=3e-13 Score=125.71 Aligned_cols=102 Identities=24% Similarity=0.220 Sum_probs=76.6
Q ss_pred HHHHHHHHHhcCCccEEEeecCchhhhHHHHHHHhCCCEEEEecCCCCCCceeeeeeeecccceeEEEEecccCCCCeEE
Q 024917 114 TIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERAL 193 (260)
Q Consensus 114 l~~~La~~i~~~~iDvVVgve~rG~~lA~~LA~~Lgvp~v~iRK~~kl~~~~~s~~y~~e~g~~~lel~~~~i~~GkrVL 193 (260)
+++++.+.+.+.+.++||+++.||+.+|..+|+.||+|+.+++|.++.++.+. ...+ .+. .+|++|+
T Consensus 151 l~~~i~~~~~~~~~~vVVspd~Ggv~~A~~lA~~L~~~~~~i~K~r~~~~~v~-----------~~~l-~g~-v~gk~vi 217 (326)
T 3s5j_B 151 VLKWIRENISEWRNCTIVSPDAGGAKRVTSIADRLNVDFALIHKERKKANEVD-----------RMVL-VGD-VKDRVAI 217 (326)
T ss_dssp HHHHHHHHCTTGGGCEEEESSGGGHHHHHHHHHHHTCEEEEEEEC-------C-----------CEEE-ESC-CTTSEEE
T ss_pred HHHHHHHhcCcCCCcEEEEECCCchHHHHHHHHHcCCCEEEEEEEecCCCeee-----------EEec-ccc-CCCCEEE
Confidence 34444444433345799999999999999999999999999998775332210 1111 233 4899999
Q ss_pred EEeeeccchHHHHHHHHHHHhCCCcEEEEEEEEec
Q 024917 194 IVDDLVATGGTLSAAIRLLGSFQNHIFILICIQML 228 (260)
Q Consensus 194 IVDDVltTG~Tl~aa~~LL~~~Ga~vV~~avlve~ 228 (260)
||||+++||+|+.++++.|++.|++.+.+++....
T Consensus 218 IVDDii~TG~Tl~~a~~~L~~~Ga~~v~~~~tH~v 252 (326)
T 3s5j_B 218 LVDDMADTCGTICHAADKLLSAGATRVYAILTHGI 252 (326)
T ss_dssp EEEEEESSCHHHHHHHHHHHHTTCSEEEEEEEEEC
T ss_pred EEccccCCcHHHHHHHHHHHHcCCCEEEEEEEecc
Confidence 99999999999999999999999999999886543
No 43
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A*
Probab=99.46 E-value=1.8e-13 Score=129.35 Aligned_cols=115 Identities=13% Similarity=0.097 Sum_probs=74.1
Q ss_pred HHHHHHHHHhcCCccEEEeecCchhhhHHHHHHHhCCCEEEEecCCCC----------CCceeeeeeeecccce------
Q 024917 114 TIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKL----------PGEVISEEYSLEYGKD------ 177 (260)
Q Consensus 114 l~~~La~~i~~~~iDvVVgve~rG~~lA~~LA~~Lgvp~v~iRK~~kl----------~~~~~s~~y~~e~g~~------ 177 (260)
+++.+.+.+.+.+.++|++++.||+++|..+|++||+|+.+++|+++- +.+.+...+..++|..
T Consensus 179 La~~I~~~~~~~~~~vVV~pd~GGv~~A~~lA~~L~~pl~ii~k~r~~~~~e~~~gr~~~~~v~~~~~~~~g~~i~~~~~ 258 (379)
T 2ji4_A 179 LLQYIQEEIPDYRNAVIVAKSPASAKRAQSFAERLRLGIAVIHGEAQDAESDLVDGRHSPPMVRSVAAIHPSLEIPMLIP 258 (379)
T ss_dssp HHHHHHHHSTTGGGEEEEESSGGGHHHHHHHHHHTTCEEEEEC-------------------------------------
T ss_pred HHHHHHHhcccCCCcEEEEEccchHHHHHHHHHHhCCCEEEEEEEeecccccccccccCCcccccccccccccchhhhhh
Confidence 444444444333567999999999999999999999999888765431 1111111122222211
Q ss_pred e--EEEEecccCCCCeEEEEeeeccchHHHHHHHHHHHhCCCcEEEEEEEEec
Q 024917 178 V--MEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQML 228 (260)
Q Consensus 178 ~--lel~~~~i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~~avlve~ 228 (260)
. ..+......+|++|+||||+++||+|+.++++.|++.|++.+.+++....
T Consensus 259 ~~~~~~~l~g~v~Gk~viiVDDii~TG~Tl~~a~~~L~~~Ga~~v~~~~tH~v 311 (379)
T 2ji4_A 259 KEKPPITVVGDVGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFVMATHGL 311 (379)
T ss_dssp ----CCCEESCCTTSEEEEEEEEECSCHHHHHHHHHHHHTTCCEEEEEEEEEC
T ss_pred hcccccccccCCCCCEEEEEecCCCchHHHHHHHHHHHhcCCCEEEEEEEeec
Confidence 0 00011122589999999999999999999999999999999998886553
No 44
>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A*
Probab=99.41 E-value=6e-13 Score=129.56 Aligned_cols=113 Identities=15% Similarity=0.149 Sum_probs=76.8
Q ss_pred HHHHHHHHHHHhcCCccEEEeecCchhhhHHHHHHHhCCCEE--EEecCCCCCCceee--eeeeecccceeEEEEecccC
Q 024917 112 RDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFV--PMRKPKKLPGEVIS--EEYSLEYGKDVMEMHVGAVQ 187 (260)
Q Consensus 112 ~~l~~~La~~i~~~~iDvVVgve~rG~~lA~~LA~~Lgvp~v--~iRK~~kl~~~~~s--~~y~~e~g~~~lel~~~~i~ 187 (260)
+.+++.+.+.+.+.++|+|++++.+|+++|..+|+.+|+|+. +++++.. ....+. ...+...-...+..... ..
T Consensus 280 ~~La~~i~~~~~~~~~dvVv~vP~~g~~~A~~la~~lg~p~~~~~~k~r~~-~~t~i~~~~~~R~~~v~~~~~~~~~-~v 357 (504)
T 1ecf_A 280 TKLGEKIAREWEDLDIDVVIPIPETSCDIALEIARILGKPYRQGFVKNRYV-GRTFIMPGQQLRRKSVRRKLNANRA-EF 357 (504)
T ss_dssp HHHHHHHHHHTTTCCCCEEEECTTTTHHHHHHHHHHHTCCBCCCEEECSCC-CCCCCCSSSCCCCCCSTTTEEECGG-GT
T ss_pred HHHHHHHHHHcCCCCCeEEEEECCcHHHHHHHHHHHhCCCceeeEEEeccc-CCceeCccHHHHHHHHHhhhccccc-cC
Confidence 344444444443346899999999999999999999999985 3443221 111111 00000011112333222 35
Q ss_pred CCCeEEEEeeeccchHHHHHHHHHHHhCCCcEEEEEEEE
Q 024917 188 AGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQ 226 (260)
Q Consensus 188 ~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~~avlv 226 (260)
+||+||||||+++||+|+.+++++|+++|++.|.++++.
T Consensus 358 ~Gk~VllVDDii~TG~Tl~~~~~~L~~~Ga~~V~~~~l~ 396 (504)
T 1ecf_A 358 RDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAA 396 (504)
T ss_dssp TTCCEEEEESCCSSSHHHHHHHHHHHHTTCSSEEEEESS
T ss_pred CCCeEEEEeccccccHHHHHHHHHHHhcCCcEEEEEEEe
Confidence 899999999999999999999999999999999988773
No 45
>3acd_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 3acc_A* 3acb_A*
Probab=99.41 E-value=2.5e-12 Score=110.05 Aligned_cols=126 Identities=16% Similarity=0.201 Sum_probs=86.3
Q ss_pred hhhccCHHHHHHHHHHHH----HHHhcCCccEEEeecCchhhhHHHHHHHhCCCEE--EEecCCCCCCceeeeeeeec-c
Q 024917 102 TTLLLDTKAFRDTIDLFV----ERYKDKNISVVAGIEARGFIFGPPIALAIGAKFV--PMRKPKKLPGEVISEEYSLE-Y 174 (260)
Q Consensus 102 ~~ll~dp~~~~~l~~~La----~~i~~~~iDvVVgve~rG~~lA~~LA~~Lgvp~v--~iRK~~kl~~~~~s~~y~~e-~ 174 (260)
..++.+.+.++...+.|| +.+.+ +..+++|+..||++||..|++.++.|.- +++-. +|... .
T Consensus 10 ~~vlis~~~I~~~i~rlA~eI~e~~~~-~~~vlvgIl~Gg~~fa~~L~~~l~~~~~~~~i~~s----------sy~~~~~ 78 (181)
T 3acd_A 10 GPVQISAEAIKKRVEELGGEIARDYQG-KTPHLICVLNGAFIFMADLVRAIPLPLTMDFIAIS----------SYGNAFK 78 (181)
T ss_dssp SSCCBCHHHHHHHHHHHHHHHHHHTTT-CCCEEEEEETTTHHHHHHHHTTCCSCCEEEEEEEC-----------------
T ss_pred ccEEeCHHHHHHHHHHHHHHHHHHhCC-CCcEEEEEecCcHHHHHHHHHhcCCCccccceEEE----------EecCCcC
Confidence 346677776665555555 44444 3459999999999999999999998852 22211 11100 0
Q ss_pred cceeEEEEe--cccCCCCeEEEEeeeccchHHHHHHHHHHHhCCCcEEEEEEEEecCc-----cCcceEEe
Q 024917 175 GKDVMEMHV--GAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNA-----CFSSYILL 238 (260)
Q Consensus 175 g~~~lel~~--~~i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~~avlve~~~-----~~~e~~~L 238 (260)
..+...+.. ..-.+|++|||||||+.||.|++++.+.|++.|++.+.++++++++. ..+||+..
T Consensus 79 ~~g~~~~~~~~~~~i~gk~VllVDDIldTG~Tl~~~~~~l~~~~p~sv~~avLl~K~~~r~~pi~~DyvG~ 149 (181)
T 3acd_A 79 SSGEVELLKDLRLPIHGRDVIVVEDIVDTGLTLSYLLDYLEARKPASVRVAALLSKPSRRQVEVPIHYLGF 149 (181)
T ss_dssp -----CEEECCCSCCTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEECGGGCSSCCCCSEEEE
T ss_pred CCCceEeccCCCcccCCCeeEEEEEEEcCchhHHHHHHHHhcCCCCEEEEEEEEEcCccccCCCCCCEEEE
Confidence 111111222 22358999999999999999999999999999999999999999765 33577653
No 46
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A*
Probab=99.41 E-value=1.8e-12 Score=119.80 Aligned_cols=108 Identities=20% Similarity=0.229 Sum_probs=79.1
Q ss_pred CccEEEeecCchhhhHHHHHHHhCCCEEEEecCCCCCCceeeeeeeecccceeEEEEecccCCCCeEEEEeeeccchHHH
Q 024917 126 NISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTL 205 (260)
Q Consensus 126 ~iDvVVgve~rG~~lA~~LA~~Lgvp~v~iRK~~kl~~~~~s~~y~~e~g~~~lel~~~~i~~GkrVLIVDDVltTG~Tl 205 (260)
+..+|++++.+|+.+|..+|+.+|+|+.+++|.++.+. ....+.+. +. .+|++||||||+++||+|+
T Consensus 167 ~~~vVv~pd~Gg~~~A~~la~~L~~p~~~l~k~r~~~~-----------~~~~~~l~-~~-v~gk~VlLVDDiitTG~Tl 233 (317)
T 1dku_A 167 EDIVIVSPDHGGVTRARKLADRLKAPIAIIDKRRPRPN-----------VAEVMNIV-GN-IEGKTAILIDDIIDTAGTI 233 (317)
T ss_dssp CSEEEEESSGGGHHHHHHHHHHTTCCEEEEECC--------------------CEEE-SC-CTTCEEEEECSEESSCHHH
T ss_pred CCcEEEEeCcchHHHHHHHHHHhCCCEEEEEEEecccc-----------ceeEEEec-cc-CCCCEEEEEecccCCCHHH
Confidence 56699999999999999999999999988877653111 11123332 33 4899999999999999999
Q ss_pred HHHHHHHHhCCCcEEEEEE---EEecCc----cCcceEEeeeeeccCc
Q 024917 206 SAAIRLLGSFQNHIFILIC---IQMLNA----CFSSYILLFSYATNGF 246 (260)
Q Consensus 206 ~aa~~LL~~~Ga~vV~~av---lve~~~----~~~e~~~L~~~~~~~~ 246 (260)
.++++.|++.|++.|.+++ ++..+. .....-.++..++...
T Consensus 234 ~~aa~~Lk~~Ga~~V~~~~tH~v~~~~a~~~l~~~~i~~vv~t~tip~ 281 (317)
T 1dku_A 234 TLAANALVENGAKEVYACCTHPVLSGPAVERINNSTIKELVVTNSIKL 281 (317)
T ss_dssp HHHHHHHHHTTCSEEEEECSEECCCTTHHHHHHTSSEEEEEEETTSCC
T ss_pred HHHHHHHHHcCCcEEEEEEECcccChHHHHHHhhCCCCEEEEeCCcCc
Confidence 9999999999999999988 666553 1123444555555543
No 47
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=99.39 E-value=9e-13 Score=122.11 Aligned_cols=90 Identities=20% Similarity=0.294 Sum_probs=66.0
Q ss_pred CccEEEeecCchhhhHHHHHHHhCCCEEEEecCCCCCCceeeeeeeecccceeEEEEecccCCCCeEEEEeeeccchHHH
Q 024917 126 NISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTL 205 (260)
Q Consensus 126 ~iDvVVgve~rG~~lA~~LA~~Lgvp~v~iRK~~kl~~~~~s~~y~~e~g~~~lel~~~~i~~GkrVLIVDDVltTG~Tl 205 (260)
+.++|++++.||+.+|..+|+.||+|+.+++|.++.++.. ..+.+. +. .+|++|+||||+++||+|+
T Consensus 166 ~~~vVVspd~Ggv~~A~~lA~~L~~p~~~i~K~r~~~~~v-----------~~~~i~-g~-v~gk~viiVDDii~TG~Tl 232 (319)
T 3dah_A 166 PDLLVVSPDVGGVVRARALAKQLNCDLAIIDKRRPKANVA-----------EVMNII-GE-VEGRTCVIMDDMVDTAGTL 232 (319)
T ss_dssp TTEEEECCSSTTHHHHHHHHHHTTCEEEC---------------------------------CCSEEEEEEEEESSCHHH
T ss_pred CCcEEEEeCCCccHHHHHHHHHhCCCEEEEEEEeccCCce-----------EEEEcc-cc-CCCCEEEEEecccCchHHH
Confidence 4579999999999999999999999999888876532211 011221 23 4899999999999999999
Q ss_pred HHHHHHHHhCCCcEEEEEEEEec
Q 024917 206 SAAIRLLGSFQNHIFILICIQML 228 (260)
Q Consensus 206 ~aa~~LL~~~Ga~vV~~avlve~ 228 (260)
.++++.|++.|++.+.+++....
T Consensus 233 ~~a~~~L~~~Ga~~v~~~~tH~v 255 (319)
T 3dah_A 233 CKAAQVLKERGAKQVFAYATHPV 255 (319)
T ss_dssp HHHHHHHHHTTCSCEEEEEEEEC
T ss_pred HHHHHHHHHcCCCEEEEEEEeec
Confidence 99999999999999999887654
No 48
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1*
Probab=99.32 E-value=3.7e-12 Score=122.51 Aligned_cols=114 Identities=16% Similarity=0.153 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHHhcCCccEEEeecCchhhhHHHHHHHhCCCEE--EEecCCCCCCceee--eeeeecccceeEEEEecc
Q 024917 110 AFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFV--PMRKPKKLPGEVIS--EEYSLEYGKDVMEMHVGA 185 (260)
Q Consensus 110 ~~~~l~~~La~~i~~~~iDvVVgve~rG~~lA~~LA~~Lgvp~v--~iRK~~kl~~~~~s--~~y~~e~g~~~lel~~~~ 185 (260)
....+++.+++.+. .+.|+|++++.+|..+|..+|+.+|+|+. +.|++.. ..+.+. ...+...-...+.+...
T Consensus 258 ~r~~lg~~La~~~~-~~~DvVV~VP~~g~~~A~~la~~lg~p~~~~l~k~r~~-~~~~~~~~~~~R~~~~~~~~~~~~~- 334 (459)
T 1ao0_A 258 ARKNLGKMLAQESA-VEADVVTGVPDSSISAAIGYAEATGIPYELGLIKNRYV-GRTFIQPSQALREQGVRMKLSAVRG- 334 (459)
T ss_dssp HHHHHHHHHHHHHC-CCCSEEECCTTTTHHHHHHHHHHHCCCBCCCEEECTTC-CTTSCCCCHHHHHHTCCSSEEECHH-
T ss_pred HHHHHHHHHHHhcc-cCCcEEEEECCcHHHHHHHHHHHhCCCCceeEEEecCC-CccccCCCHHHHHhhhhhhcccccc-
Confidence 44567888887775 46899999999999999999999999985 3343321 111110 00000011122332222
Q ss_pred cCCCCeEEEEeeeccchHHHHHHHHHHHhCCCcEEEEEEEE
Q 024917 186 VQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQ 226 (260)
Q Consensus 186 i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~~avlv 226 (260)
..+||+||||||++|||+|+.+++++|+++||+.|.++++.
T Consensus 335 ~v~gk~VlLVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~ 375 (459)
T 1ao0_A 335 VVEGKRVVMVDDSIVRGTTSRRIVTMLREAGATEVHVKISS 375 (459)
T ss_dssp HHTTCEEEEEESCCSSSHHHHHHHHHHHHTTCSEEEEEESS
T ss_pred cCCCCeEEEEeeeecCHHHHHHHHHHHHHcCCCEEEEEEec
Confidence 24899999999999999999999999999999999988864
No 49
>1dqn_A Guanine phosphoribosyltransferase; protein-inhibitor complex, Mg IONS, pyrophosphate, transition state analogue; HET: IMU; 1.75A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1dqp_A*
Probab=99.28 E-value=6.6e-12 Score=111.34 Aligned_cols=113 Identities=7% Similarity=0.153 Sum_probs=80.3
Q ss_pred hhhccCHHHHHHHHHHHHHHHhc---C--CccEEEeecCchhhhHHHHHHHhCCCEE--EEecCCCCCCceeeeeeeecc
Q 024917 102 TTLLLDTKAFRDTIDLFVERYKD---K--NISVVAGIEARGFIFGPPIALAIGAKFV--PMRKPKKLPGEVISEEYSLEY 174 (260)
Q Consensus 102 ~~ll~dp~~~~~l~~~La~~i~~---~--~iDvVVgve~rG~~lA~~LA~~Lgvp~v--~iRK~~kl~~~~~s~~y~~e~ 174 (260)
..++.+.+.+...++.|++++.+ . +.++|+|+..+|+++|..+|+.+++|+. +++.. +|..+.
T Consensus 32 ~~vlis~~~I~~~i~~LA~~I~~~~~~~~~~~vvVgi~~Gg~~~a~~La~~L~~p~~v~~i~vs----------~y~~~~ 101 (230)
T 1dqn_A 32 FHLLATFEECKALAADTARRMNEYYKDVAEPVTLVALLTGAYLYASLLTVHLTFPYTLHFVKVS----------SYKGTR 101 (230)
T ss_dssp CEEEECHHHHHHHHHHHHHHHHHHHTTCSSCEEEEEETTTHHHHHHHHHTTCCSCEEEEEECCE----------EEECSS
T ss_pred ccEecCHHHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCCHHHHHHHHHHhCCCceEEEEEEE----------EeCCCc
Confidence 34667777777666666655542 1 4679999999999999999999999963 23221 121111
Q ss_pred cceeEEE-Eec--ccCCCCeEEEEeeeccchHHHHHHHHHHHhCCCcEEEEEEEEecCc
Q 024917 175 GKDVMEM-HVG--AVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNA 230 (260)
Q Consensus 175 g~~~lel-~~~--~i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~~avlve~~~ 230 (260)
..+ ..+ ..+ .-.+||+||||||+++||.|+.++++.|++ +.++++++++.
T Consensus 102 s~~-v~i~~~~l~~~v~Gk~VLIVDDIidTG~Tl~~a~~~L~~-----V~vavLl~k~~ 154 (230)
T 1dqn_A 102 QES-VVFDEEDLKQLKEKREVVLIDEYVDSGHTIFSIQEQIKH-----AKICSCFVKDV 154 (230)
T ss_dssp CEE-EECCHHHHHHHHHCSSEEEEEEEESSSHHHHHHHHHSTT-----CEEEEEEESCH
T ss_pred cCc-eEEEeccCccCCCCCEEEEEeeEcChHHHHHHHHHHhhc-----CEEEEEEECCc
Confidence 111 222 111 124899999999999999999999999988 78888999886
No 50
>1i5e_A Uracil phosphoribosyltransferase; salvage pathway; HET: U5P; 3.00A {Bacillus caldolyticus} SCOP: c.61.1.1
Probab=98.83 E-value=7.5e-09 Score=90.11 Aligned_cols=93 Identities=23% Similarity=0.158 Sum_probs=66.7
Q ss_pred ccEEEeecCchhhhHHHHHHHh-CCCEEEEecCCCCCCceeeeeeeeccccee-EEEEecccCCCCeEEEEeeeccchHH
Q 024917 127 ISVVAGIEARGFIFGPPIALAI-GAKFVPMRKPKKLPGEVISEEYSLEYGKDV-MEMHVGAVQAGERALIVDDLVATGGT 204 (260)
Q Consensus 127 iDvVVgve~rG~~lA~~LA~~L-gvp~v~iRK~~kl~~~~~s~~y~~e~g~~~-lel~~~~i~~GkrVLIVDDVltTG~T 204 (260)
..+++++..+|++++..+.+.+ ..++..+.+.+.. . .++.. +......-.+|++|+||||+++||+|
T Consensus 71 ~~~vV~Ilr~G~~~~~~L~~~l~~~~~~~i~~~r~~--~---------t~~~~~~~~~lp~~i~~~~VllvDd~l~TG~T 139 (209)
T 1i5e_A 71 KLGVIPILRAGIGMVDGILKLIPAAKVGHIGLYRDP--Q---------TLKPVEYYVKLPSDVEERDFIIVDPMLATGGS 139 (209)
T ss_dssp CEEEEEBTTGGGGGHHHHHHHCTTSEECEEEEECCT--T---------CSSCEEEEEECCTTTTTSEEEEECSEESSSHH
T ss_pred ceEEEEEecCChHHHHHHHHhCCCCeEEEEEEEEcC--C---------CCceEEEEEcCCCccCCCEEEEEcCCCcCHHH
Confidence 3488899999999999999998 4444332221110 0 01111 11111222479999999999999999
Q ss_pred HHHHHHHHHhCCCcEEEEEEEEecCc
Q 024917 205 LSAAIRLLGSFQNHIFILICIQMLNA 230 (260)
Q Consensus 205 l~aa~~LL~~~Ga~vV~~avlve~~~ 230 (260)
+.++++.|++.|++.+.+++++..++
T Consensus 140 ~~~a~~~L~~~G~~~I~~~~lv~~~~ 165 (209)
T 1i5e_A 140 AVAAIDALKKRGAKSIKFMCLIAAPE 165 (209)
T ss_dssp HHHHHHHHHHTTCCCEEEECSEECHH
T ss_pred HHHHHHHHHHcCCCEEEEEEEEECHH
Confidence 99999999999999999998888765
No 51
>1o5o_A Uracil phosphoribosyltransferase; TM0721, structural genomic PSI, protein structure initiative, joint center for structu genomics; HET: U5P; 2.30A {Thermotoga maritima} SCOP: c.61.1.1
Probab=98.74 E-value=3.3e-08 Score=87.16 Aligned_cols=91 Identities=18% Similarity=0.183 Sum_probs=66.8
Q ss_pred EEEeecCchhhhHHHHHHHh-CCCEEEEecCCCCCCceeeeeeeecccceeE-EEEecccCCCCeEEEEeeeccchHHHH
Q 024917 129 VVAGIEARGFIFGPPIALAI-GAKFVPMRKPKKLPGEVISEEYSLEYGKDVM-EMHVGAVQAGERALIVDDLVATGGTLS 206 (260)
Q Consensus 129 vVVgve~rG~~lA~~LA~~L-gvp~v~iRK~~kl~~~~~s~~y~~e~g~~~l-el~~~~i~~GkrVLIVDDVltTG~Tl~ 206 (260)
++|++..+|+.++..+++.+ ++++..+.+.+.- . .++... ...-..-.+|+.|+||||+++||+|+.
T Consensus 85 viV~IlrgG~~~~~~l~~~lp~a~vg~I~~~Rd~--~---------t~~~~~~~~~lp~di~gr~VilvDd~laTG~Tl~ 153 (221)
T 1o5o_A 85 VVVPILRAGLVMADGILELLPNASVGHIGIYRDP--E---------TLQAVEYYAKLPPLNDDKEVFLLDPMLATGVSSI 153 (221)
T ss_dssp EEEEEETTHHHHHHHHHHHSTTCEECEEEEEECT--T---------TCCEEEEEEECCCCCTTCEEEEECSEESSSHHHH
T ss_pred EEEEEecchHHHHHHHHHhCCCCcEEEEEEEEcC--C---------CCceeEEEecCCCccCCCEEEEECCccccHHHHH
Confidence 88999999999999999999 5554332221110 0 011111 111122247999999999999999999
Q ss_pred HHHHHHHhCCCcEEEEEEEEecCc
Q 024917 207 AAIRLLGSFQNHIFILICIQMLNA 230 (260)
Q Consensus 207 aa~~LL~~~Ga~vV~~avlve~~~ 230 (260)
++++.|++.|++.+.+++++..++
T Consensus 154 ~ai~~L~~~G~~~I~~~~lv~~~~ 177 (221)
T 1o5o_A 154 KAIEILKENGAKKITLVALIAAPE 177 (221)
T ss_dssp HHHHHHHHTTCCEEEEECSEECHH
T ss_pred HHHHHHHHcCCCEEEEEEEEeCHH
Confidence 999999999999999999988875
No 52
>2ehj_A Uracil phosphoribosyltransferase; structural genomics; 2.80A {Escherichia coli}
Probab=98.65 E-value=1.7e-07 Score=81.88 Aligned_cols=89 Identities=22% Similarity=0.205 Sum_probs=65.3
Q ss_pred EEEeecCchhhhHHHHHHHhC-CC--EEEEecCCCCCCceeeeeeeecccceeEEE-EecccCCCCeEEEEeeeccchHH
Q 024917 129 VVAGIEARGFIFGPPIALAIG-AK--FVPMRKPKKLPGEVISEEYSLEYGKDVMEM-HVGAVQAGERALIVDDLVATGGT 204 (260)
Q Consensus 129 vVVgve~rG~~lA~~LA~~Lg-vp--~v~iRK~~kl~~~~~s~~y~~e~g~~~lel-~~~~i~~GkrVLIVDDVltTG~T 204 (260)
++|++-.+|+.++..+.+.+. ++ ++-+.+... .++-..+. .-..-.+|++|+||||+++||+|
T Consensus 72 ~~V~ILraG~~~~~~l~~~ip~~~vg~i~~~rd~~-------------t~~~~~~~~~lp~di~~r~VilvDd~laTG~T 138 (208)
T 2ehj_A 72 TVVPILRAGLGMMDGVLENVPSARISVVGMYRNEE-------------TLEPVPYFQKLVSNIDERMALIVDPMLATGGS 138 (208)
T ss_dssp EEEEBTTGGGGGHHHHHHHCTTCEECEEEEEECTT-------------TCCEEEEEEECCSCGGGCEEEEEEEEESSCHH
T ss_pred EEEEeecCHHHHHHHHHHhCCcCceeEEEEEEcCC-------------CCceEEEecCCCCccCCCEEEEECCccccHHH
Confidence 889999999999999999885 11 222222110 01111111 11222478999999999999999
Q ss_pred HHHHHHHHHhCCCcEEEEEEEEecCc
Q 024917 205 LSAAIRLLGSFQNHIFILICIQMLNA 230 (260)
Q Consensus 205 l~aa~~LL~~~Ga~vV~~avlve~~~ 230 (260)
+.++++.|++.|++.+.+++++..++
T Consensus 139 ~~~ai~~L~~~G~~~I~~~~lv~~p~ 164 (208)
T 2ehj_A 139 VIATIDLLKKAGCSSIKVLVLVAAPE 164 (208)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEEECHH
T ss_pred HHHHHHHHHHcCCCEEEEEEEEeCHH
Confidence 99999999999999999999998876
No 53
>2e55_A Uracil phosphoribosyltransferase; structural genomics; 2.15A {Aquifex aeolicus}
Probab=98.65 E-value=1.5e-07 Score=82.09 Aligned_cols=88 Identities=19% Similarity=0.211 Sum_probs=65.1
Q ss_pred EEEeecCchhhhHHHHHHHhCC-C--EEEEecCCCCCCceeeeeeeecccceeE-EEEecccCCCCeEEEEeeeccchHH
Q 024917 129 VVAGIEARGFIFGPPIALAIGA-K--FVPMRKPKKLPGEVISEEYSLEYGKDVM-EMHVGAVQAGERALIVDDLVATGGT 204 (260)
Q Consensus 129 vVVgve~rG~~lA~~LA~~Lgv-p--~v~iRK~~kl~~~~~s~~y~~e~g~~~l-el~~~~i~~GkrVLIVDDVltTG~T 204 (260)
++|++-.+|+.++..+.+.+.- + ++-+.+... .++... ...-. -.+|++|+||||+++||+|
T Consensus 71 ~~V~ILraG~~~~~~l~~~lp~~~vg~i~~~rd~~-------------t~~~~~~~~~lp-di~~r~vilvDd~laTG~T 136 (208)
T 2e55_A 71 VFVPILRAGLSFLEGALQVVPNAKVGFLGIKRNEE-------------TLESHIYYSRLP-ELKGKIVVILDPMLATGGT 136 (208)
T ss_dssp EEEEEETTTHHHHHHHHHHSTTCEECEEEEEECTT-------------TCCEEEEEEECC-CCBTSEEEEECSEESSSHH
T ss_pred EEEEEecchHHHHHHHHHhCCCCcEEEEEEEEecC-------------CCceEEEecCCC-CCCCCEEEEECCccccHHH
Confidence 8899999999999999999861 1 121211110 011111 11112 3479999999999999999
Q ss_pred HHHHHHHHHhCCCcEEEEEEEEecCc
Q 024917 205 LSAAIRLLGSFQNHIFILICIQMLNA 230 (260)
Q Consensus 205 l~aa~~LL~~~Ga~vV~~avlve~~~ 230 (260)
+.++++.|++.|++.+.+++++..++
T Consensus 137 ~~~ai~~L~~~G~~~I~~~~lv~~~~ 162 (208)
T 2e55_A 137 LEVALREILKHSPLKVKSVHAIAAPE 162 (208)
T ss_dssp HHHHHHHHHTTCBSEEEEEEEEECHH
T ss_pred HHHHHHHHHHcCCCEEEEEEEEECHH
Confidence 99999999999999999999998875
No 54
>1v9s_A Uracil phosphoribosyltransferase; pyrimidine salvage, oligomerization, structural genomics, RI structural genomics/proteomics initiative; 2.10A {Thermus thermophilus} SCOP: c.61.1.1
Probab=98.49 E-value=1.7e-07 Score=81.89 Aligned_cols=91 Identities=22% Similarity=0.218 Sum_probs=63.2
Q ss_pred EEEeecCchhhhHHHHHHHhC-CCEEEEecCCCCCCceeeeeeeecccceeE-EEEecccCCCCeEEEEeeeccchHHHH
Q 024917 129 VVAGIEARGFIFGPPIALAIG-AKFVPMRKPKKLPGEVISEEYSLEYGKDVM-EMHVGAVQAGERALIVDDLVATGGTLS 206 (260)
Q Consensus 129 vVVgve~rG~~lA~~LA~~Lg-vp~v~iRK~~kl~~~~~s~~y~~e~g~~~l-el~~~~i~~GkrVLIVDDVltTG~Tl~ 206 (260)
++|++-.+|+.++..+.+.+. +++-.+.-.+. . +.++-.. ...-..-.+|++|+||||+++||+|+.
T Consensus 72 ~~V~ILraG~~~~~~l~~~ip~~~vg~I~~~rd----------~-~t~~~~~~~~~lp~di~~r~vilvDd~laTG~T~~ 140 (208)
T 1v9s_A 72 ALVAILRAGLVMVEGILKLVPHARVGHIGLYRD----------P-ESLNPVQYYIKLPPDIAERRAFLLDPMLATGGSAS 140 (208)
T ss_dssp EEEEETTTHHHHHHHHHTTCTTCEEEEEEEC--------------------CEEEECCSCGGGSCEEEECSEESSSHHHH
T ss_pred EEEEeccchHHHHHHHHHhCCCCeeeEEEEEEc----------C-CCCCceEEeccCCCccCCCEEEEECCccccHHHHH
Confidence 889999999999999998875 12211111110 0 0011111 111122247899999999999999999
Q ss_pred HHHHHHHhCCCcEEEEEEEEecCc
Q 024917 207 AAIRLLGSFQNHIFILICIQMLNA 230 (260)
Q Consensus 207 aa~~LL~~~Ga~vV~~avlve~~~ 230 (260)
++++.|++.|++.+.+++++..++
T Consensus 141 ~ai~~L~~~G~~~I~~~~lv~~~~ 164 (208)
T 1v9s_A 141 LALSLLKERGATGVKLMAILAAPE 164 (208)
T ss_dssp HHHHHHHHTTCCSCEEEEEEECHH
T ss_pred HHHHHHHHcCCCEEEEEEEEeCHH
Confidence 999999999999999999988875
No 55
>1bd3_D Uprtase, uracil phosphoribosyltransferase; glycosyltransferase; 1.93A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1bd4_D 1jlr_A* 1jls_B* 1upf_D 1upu_D*
Probab=98.46 E-value=4.3e-07 Score=81.07 Aligned_cols=89 Identities=13% Similarity=0.162 Sum_probs=64.1
Q ss_pred EEEeecCchhhhHHHHHHHhC-CCE--EEEecCCCCCCceeeeeeeecccceeEE-EEecccCCCCeEEEEeeeccchHH
Q 024917 129 VVAGIEARGFIFGPPIALAIG-AKF--VPMRKPKKLPGEVISEEYSLEYGKDVME-MHVGAVQAGERALIVDDLVATGGT 204 (260)
Q Consensus 129 vVVgve~rG~~lA~~LA~~Lg-vp~--v~iRK~~kl~~~~~s~~y~~e~g~~~le-l~~~~i~~GkrVLIVDDVltTG~T 204 (260)
++|++-.+|+.++..+.+.+. +++ +-+.+... .++-.++ ..-..-.+|+.|+||||+++||+|
T Consensus 105 ~~V~ILRaG~~m~~~l~~~ip~a~vg~I~~~Rd~~-------------t~~~~~~~~~lp~di~~r~VilvDdmlaTG~T 171 (243)
T 1bd3_D 105 CGVSIVRAGESMESGLRAVCRGVRIGKILIQRDET-------------TAEPKLIYEKLPADIRERWVMLLDPMCATAGS 171 (243)
T ss_dssp EEEEEETTTHHHHHHHHHHSTTCCEEEEEEEECSS-------------SCCEEEEEEECCTTGGGSEEEEECSEESSCHH
T ss_pred EEEEEEcchHHHHHHHHHhCCcCeeeeEEEEEcCC-------------CCCeEEEeccCCcccCCCEEEEECCccccHHH
Confidence 678899999999999999885 222 22211110 0111111 111222478999999999999999
Q ss_pred HHHHHHHHHhCCC--cEEEEEEEEecCc
Q 024917 205 LSAAIRLLGSFQN--HIFILICIQMLNA 230 (260)
Q Consensus 205 l~aa~~LL~~~Ga--~vV~~avlve~~~ 230 (260)
+.++++.|++.|+ +.+.+++++..++
T Consensus 172 ~~~ai~~L~~~G~~p~~I~~~~lvaap~ 199 (243)
T 1bd3_D 172 VCKAIEVLLRLGVKEERIIFVNILAAPQ 199 (243)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEEEEECHH
T ss_pred HHHHHHHHHHcCCCcceEEEEEEEeCHH
Confidence 9999999999999 8888888888865
No 56
>3dmp_A Uracil phosphoribosyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.60A {Burkholderia pseudomallei} SCOP: c.61.1.1
Probab=98.33 E-value=9.5e-07 Score=77.61 Aligned_cols=88 Identities=16% Similarity=0.198 Sum_probs=63.4
Q ss_pred EEEeecCchhhhHHHHHHHhC-CCE--EEEecCCCCCCceeeeeeeecccceeEEEEecccCCCCeEEEEeeeccchHHH
Q 024917 129 VVAGIEARGFIFGPPIALAIG-AKF--VPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTL 205 (260)
Q Consensus 129 vVVgve~rG~~lA~~LA~~Lg-vp~--v~iRK~~kl~~~~~s~~y~~e~g~~~lel~~~~i~~GkrVLIVDDVltTG~Tl 205 (260)
++|++-.+|..++..+.+.+. +++ +-+.+...- ++. .|. ..+ .. ..|++|+||||+++||+|+
T Consensus 80 ~~V~IlRaG~~m~~~l~~~ip~a~vg~i~~~Rd~~t-~p~-------~~~---~~l--P~-i~~~~VilvD~~laTG~T~ 145 (217)
T 3dmp_A 80 AIVPVLRAGVGMSDGLLELIPSARVGHIGVYRADDH-RPV-------EYL---VRL--PD-LEDRIFILCDPMVATGYSA 145 (217)
T ss_dssp EEEEEETTTHHHHHHHHHHCTTSEECEEECSCCCSS-SCC-------CSE---EEC--CC-CTTCEEEEECSEESSSHHH
T ss_pred EEEEecccchHHHHHHHHhCcCCceeEEEEEECCCC-CcE-------EEe---ecC--CC-CCCCEEEEEcCcccccHHH
Confidence 778889999999999999984 443 222221110 100 010 112 22 4789999999999999999
Q ss_pred HHHHHHHHhCCC--cEEEEEEEEecCc
Q 024917 206 SAAIRLLGSFQN--HIFILICIQMLNA 230 (260)
Q Consensus 206 ~aa~~LL~~~Ga--~vV~~avlve~~~ 230 (260)
.++++.|++.|+ +.+.++|++..++
T Consensus 146 ~~ai~~L~~~G~pe~~I~~~~~vaa~e 172 (217)
T 3dmp_A 146 AHAIDVLKRRGVPGERLMFLALVAAPE 172 (217)
T ss_dssp HHHHHHHHTTTCCGGGEEEECSEECHH
T ss_pred HHHHHHHHHcCCCcCeEEEEEEEeCHH
Confidence 999999999999 8888888887665
No 57
>1xtt_A Probable uracil phosphoribosyltransferase; tetramer, type 1 phosphoribosyltransferase, UMP complex; HET: U5P; 1.80A {Sulfolobus solfataricus} SCOP: c.61.1.1 PDB: 1vst_A* 1xtu_A* 1xtv_A* 3g6w_A*
Probab=98.17 E-value=5.5e-06 Score=72.64 Aligned_cols=94 Identities=13% Similarity=0.114 Sum_probs=62.0
Q ss_pred EEEeecCchhhhHHHHHHHhC-CCE--EEEecCCCCCCceeeeeeeecccceeE-EEEecccCCCC--eEEEEeeeccch
Q 024917 129 VVAGIEARGFIFGPPIALAIG-AKF--VPMRKPKKLPGEVISEEYSLEYGKDVM-EMHVGAVQAGE--RALIVDDLVATG 202 (260)
Q Consensus 129 vVVgve~rG~~lA~~LA~~Lg-vp~--v~iRK~~kl~~~~~s~~y~~e~g~~~l-el~~~~i~~Gk--rVLIVDDVltTG 202 (260)
++|++..+|.+++..+.+.+. ++. +-+.+... .+. ...+. .+... +..-.. ..++ +|+||||+++||
T Consensus 74 ~iV~IlRaG~~m~~gl~~~lp~a~vg~I~~~Rd~~-t~~--~~~~~---~~p~~~y~klP~-i~~~~~~VilvDp~laTG 146 (216)
T 1xtt_A 74 VIINILRAAVPLVEGLLKAFPKARQGVIGASRVEV-DGK--EVPKD---MDVYIYYKKIPD-IRAKVDNVIIADPMIATA 146 (216)
T ss_dssp EEEEEETTTHHHHHHHHHHCTTCEEEEEEEEECCC-CCS--SCCSC---CCEEEEEEECCC-CCTTTCEEEEECSEESSS
T ss_pred EEEeecCCcHHHHHHHHHHcccCccceEEEEECCC-ccc--ccccc---cCceEeeccCCC-ccCCcceEEEEcCCccch
Confidence 788899999999999999874 232 22222111 000 00000 00011 111122 3677 999999999999
Q ss_pred HHHHHHHHHHHhCCC-cEEEEEEEEecCc
Q 024917 203 GTLSAAIRLLGSFQN-HIFILICIQMLNA 230 (260)
Q Consensus 203 ~Tl~aa~~LL~~~Ga-~vV~~avlve~~~ 230 (260)
+|+.++++.|++ |+ +.+.++|++..++
T Consensus 147 ~T~~~ai~~L~~-G~p~~I~~~~~vaa~~ 174 (216)
T 1xtt_A 147 STMLKVLEEVVK-ANPKRIYIVSIISSEY 174 (216)
T ss_dssp HHHHHHHHHHGG-GCCSEEEEECSEEEHH
T ss_pred HHHHHHHHHHHh-CCCCeEEEEEEecCHH
Confidence 999999999999 99 8888888887654
No 58
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=61.12 E-value=10 Score=29.59 Aligned_cols=33 Identities=21% Similarity=0.152 Sum_probs=22.5
Q ss_pred CCCCeEEEEeeeccchHHHHHHHHHHHhCCCcEEEE
Q 024917 187 QAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFIL 222 (260)
Q Consensus 187 ~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~~ 222 (260)
.++-|||||||=-+.-. ...+.|++.|..++..
T Consensus 10 ~k~~rILiVDD~~~~r~---~l~~~L~~~G~~~v~~ 42 (134)
T 3to5_A 10 NKNMKILIVDDFSTMRR---IVKNLLRDLGFNNTQE 42 (134)
T ss_dssp CTTCCEEEECSCHHHHH---HHHHHHHHTTCCCEEE
T ss_pred CCCCEEEEEeCCHHHHH---HHHHHHHHcCCcEEEE
Confidence 45668999999655443 4456677888775543
No 59
>3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae}
Probab=56.36 E-value=36 Score=29.42 Aligned_cols=141 Identities=11% Similarity=0.025 Sum_probs=69.0
Q ss_pred cchHHHHHhccccccCCCCCCCceEEechhhccCHHHHHHHHHHHHHHHhcCCccEEEeecCchhhhHHHHHH-HhCCCE
Q 024917 74 QDPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIAL-AIGAKF 152 (260)
Q Consensus 74 ~~~~~~~l~~~iR~~p~fp~~Gi~f~Di~~ll~dp~~~~~l~~~La~~i~~~~iDvVVgve~rG~~lA~~LA~-~Lgvp~ 152 (260)
+|.-.+.+.+.++....-....+ -++..+.-.|+.....+++ ++...++|+|+++.+-.. ..++. .-++|+
T Consensus 22 ld~~~~G~~~~L~~~G~~~g~nv-~~~~~~a~gd~~~~~~~~~----~l~~~~~DlIiai~t~aa---~a~~~~~~~iPV 93 (302)
T 3lkv_A 22 LDATRQGLLDGLKAKGYEEGKNL-EFDYKTAQGNPAIAVQIAR----QFVGENPDVLVGIATPTA---QALVSATKTIPI 93 (302)
T ss_dssp HHHHHHHHHHHHHHTTCCBTTTE-EEEEEECTTCHHHHHHHHH----HHHTTCCSEEEEESHHHH---HHHHHHCSSSCE
T ss_pred HHHHHHHHHHHHHhhCcccCCcE-EEEEEeCCCCHHHHHHHHH----HHHhcCCcEEEEcCCHHH---HHHHhhcCCCCe
Confidence 45445555555553321112233 3455666678876666554 445568999998865432 22222 236898
Q ss_pred EEEecCCC----C------CCceeeeeeeecccceeEEEEecccCCCCeEEEEeeeccchH--HHHHHHHHHHhCCCcEE
Q 024917 153 VPMRKPKK----L------PGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGG--TLSAAIRLLGSFQNHIF 220 (260)
Q Consensus 153 v~iRK~~k----l------~~~~~s~~y~~e~g~~~lel~~~~i~~GkrVLIVDDVltTG~--Tl~aa~~LL~~~Ga~vV 220 (260)
++.--... + ++.-+............+++-....+..++|.++-|--.+++ ....+.+.+++.|.+++
T Consensus 94 Vf~~v~dp~~~~l~~~~~~~g~nvtGv~~~~~~~~~l~l~~~l~P~~k~vgvi~~~~~~~s~~~~~~~~~~~~~~g~~~v 173 (302)
T 3lkv_A 94 VFTAVTDPVGAKLVKQLEQPGKNVTGLSDLSPVEQHVELIKEILPNVKSIGVVYNPGEANAVSLMELLKLSAAKHGIKLV 173 (302)
T ss_dssp EEEEESCTTTTTSCSCSSSCCSSEEEEECCCCHHHHHHHHHHHSTTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTCEEE
T ss_pred EEEecCCcchhhhcccccCCCCcEEEEECCcCHHHHHHHHHHhCCCCCEEEEEeCCCcccHHHHHHHHHHHHHHcCCEEE
Confidence 76432111 1 111111100000001112111122345688877766444443 34456677788888876
Q ss_pred EE
Q 024917 221 IL 222 (260)
Q Consensus 221 ~~ 222 (260)
..
T Consensus 174 ~~ 175 (302)
T 3lkv_A 174 EA 175 (302)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 60
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=45.07 E-value=38 Score=30.85 Aligned_cols=48 Identities=13% Similarity=-0.026 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHHhcCCccEEEeecCchhhhHHHHHHHhCCCEEEE
Q 024917 108 TKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPM 155 (260)
Q Consensus 108 p~~~~~l~~~La~~i~~~~iDvVVgve~rG~~lA~~LA~~Lgvp~v~i 155 (260)
.+.+..+...+.+.+++.++|+|+........++...|..+|+|++..
T Consensus 76 ~~~~~~~~~~l~~~l~~~kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~ 123 (385)
T 4hwg_A 76 AKSIGLVIEKVDEVLEKEKPDAVLFYGDTNSCLSAIAAKRRKIPIFHM 123 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHCCSEEEEESCSGGGGGHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHhcCCcEEEEECCchHHHHHHHHHHhCCCEEEE
Confidence 455555666666777777999999998777777767788899998654
No 61
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=44.83 E-value=31 Score=24.68 Aligned_cols=29 Identities=17% Similarity=0.082 Sum_probs=18.0
Q ss_pred CCeEEEEeeeccchHHHHHHHHHHHhCCCcEE
Q 024917 189 GERALIVDDLVATGGTLSAAIRLLGSFQNHIF 220 (260)
Q Consensus 189 GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV 220 (260)
+++||||||=-.. .......|++.|.++.
T Consensus 2 ~~~ilivdd~~~~---~~~l~~~L~~~g~~v~ 30 (120)
T 3f6p_A 2 DKKILVVDDEKPI---ADILEFNLRKEGYEVH 30 (120)
T ss_dssp CCEEEEECSCHHH---HHHHHHHHHHTTCEEE
T ss_pred CCeEEEEECCHHH---HHHHHHHHHhCCEEEE
Confidence 3589999985443 3344456667776544
No 62
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=44.33 E-value=54 Score=28.48 Aligned_cols=42 Identities=19% Similarity=0.126 Sum_probs=29.5
Q ss_pred HHHHHHHHHhcCCccEEEeecCchhhhHHHHHHHhCCCEEEEe
Q 024917 114 TIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMR 156 (260)
Q Consensus 114 l~~~La~~i~~~~iDvVVgve~rG~~lA~~LA~~Lgvp~v~iR 156 (260)
....+.+.+++.++|+|+. ++.....+..+|+.+|+|++...
T Consensus 90 ~~~~l~~~l~~~~pD~Vi~-d~~~~~~~~~aA~~~giP~v~~~ 131 (402)
T 3ia7_A 90 ILRAAEEALGDNPPDLVVY-DVFPFIAGRLLAARWDRPAVRLT 131 (402)
T ss_dssp HHHHHHHHHTTCCCSEEEE-ESTTHHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHhccCCCEEEE-CchHHHHHHHHHHhhCCCEEEEe
Confidence 3455666677789999997 42233457788999999987653
No 63
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=43.70 E-value=34 Score=24.55 Aligned_cols=31 Identities=23% Similarity=0.243 Sum_probs=20.8
Q ss_pred CCCeEEEEeeeccchHHHHHHHHHHHhCCCcEEE
Q 024917 188 AGERALIVDDLVATGGTLSAAIRLLGSFQNHIFI 221 (260)
Q Consensus 188 ~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~ 221 (260)
++++||||||=-... ....++|++.|..+..
T Consensus 6 ~~~~ilivdd~~~~~---~~l~~~L~~~g~~v~~ 36 (130)
T 3eod_A 6 VGKQILIVEDEQVFR---SLLDSWFSSLGATTVL 36 (130)
T ss_dssp TTCEEEEECSCHHHH---HHHHHHHHHTTCEEEE
T ss_pred CCCeEEEEeCCHHHH---HHHHHHHHhCCceEEE
Confidence 577999999865443 4445567777876543
No 64
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=43.15 E-value=34 Score=24.62 Aligned_cols=28 Identities=18% Similarity=0.131 Sum_probs=18.4
Q ss_pred CeEEEEeeeccchHHHHHHHHHHHhCCCcEE
Q 024917 190 ERALIVDDLVATGGTLSAAIRLLGSFQNHIF 220 (260)
Q Consensus 190 krVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV 220 (260)
++||||||=-.. .......|++.|.+++
T Consensus 3 ~~ILivdd~~~~---~~~l~~~l~~~g~~v~ 30 (122)
T 3gl9_A 3 KKVLLVDDSAVL---RKIVSFNLKKEGYEVI 30 (122)
T ss_dssp CEEEEECSCHHH---HHHHHHHHHHTTCEEE
T ss_pred ceEEEEeCCHHH---HHHHHHHHHHCCcEEE
Confidence 589999985443 3344566677777654
No 65
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=42.66 E-value=53 Score=28.93 Aligned_cols=42 Identities=17% Similarity=0.094 Sum_probs=29.0
Q ss_pred HHHHHHHHHhcCCccEEEeecCchhhhHHHHHHHhCCCEEEEe
Q 024917 114 TIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMR 156 (260)
Q Consensus 114 l~~~La~~i~~~~iDvVVgve~rG~~lA~~LA~~Lgvp~v~iR 156 (260)
+...+.+.+++.++|+|+. +.--...+..+|+.+|+|++..-
T Consensus 106 ~~~~l~~~l~~~~PDlVi~-d~~~~~~~~~aA~~~giP~v~~~ 147 (415)
T 3rsc_A 106 VLRATAEALDGDVPDLVLY-DDFPFIAGQLLAARWRRPAVRLS 147 (415)
T ss_dssp HHHHHHHHHSSSCCSEEEE-ESTTHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHhccCCCEEEE-CchhhhHHHHHHHHhCCCEEEEE
Confidence 4455666677788999994 52223346778999999987654
No 66
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=41.82 E-value=24 Score=25.39 Aligned_cols=37 Identities=11% Similarity=0.038 Sum_probs=32.2
Q ss_pred ccCCCCeEEEEeeeccchHHHHHHHHHHHhCCCcEEE
Q 024917 185 AVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFI 221 (260)
Q Consensus 185 ~i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~ 221 (260)
.+..|++|+=|+..-.+|.|...+.++|++.|-++.-
T Consensus 40 Gl~~GD~Il~VNG~~v~~~~~~evv~llr~~g~~V~L 76 (82)
T 1r6j_A 40 GLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTI 76 (82)
T ss_dssp TCCSSEEEEEETTEECTTCCHHHHHHHHHHSCSEEEE
T ss_pred CCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCEEEE
Confidence 3578999999999999999999999999988776543
No 67
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=39.39 E-value=38 Score=24.84 Aligned_cols=30 Identities=17% Similarity=0.272 Sum_probs=17.9
Q ss_pred CCCeEEEEeeeccchHHHHHHHHHHHhCCCcEE
Q 024917 188 AGERALIVDDLVATGGTLSAAIRLLGSFQNHIF 220 (260)
Q Consensus 188 ~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV 220 (260)
++.+||||||=-... ....+.|++.|.++.
T Consensus 4 ~~~~ilivdd~~~~~---~~l~~~L~~~g~~v~ 33 (140)
T 3h5i_A 4 KDKKILIVEDSKFQA---KTIANILNKYGYTVE 33 (140)
T ss_dssp --CEEEEECSCHHHH---HHHHHHHHHTTCEEE
T ss_pred CCcEEEEEeCCHHHH---HHHHHHHHHcCCEEE
Confidence 457899999855443 444555666676544
No 68
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=37.83 E-value=52 Score=23.06 Aligned_cols=30 Identities=27% Similarity=0.252 Sum_probs=18.5
Q ss_pred CCeEEEEeeeccchHHHHHHHHHHHhCCCcEEE
Q 024917 189 GERALIVDDLVATGGTLSAAIRLLGSFQNHIFI 221 (260)
Q Consensus 189 GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~ 221 (260)
+.+||||||=-.....+ .+.|++.|.+++.
T Consensus 2 ~~~ilivdd~~~~~~~l---~~~l~~~g~~vv~ 31 (120)
T 1tmy_A 2 GKRVLIVDDAAFMRMML---KDIITKAGYEVAG 31 (120)
T ss_dssp CCEEEEECSCHHHHHHH---HHHHHHTTCEEEE
T ss_pred CceEEEEcCcHHHHHHH---HHHHhhcCcEEEE
Confidence 35799999865544443 4455567776543
No 69
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=37.29 E-value=66 Score=28.58 Aligned_cols=36 Identities=17% Similarity=-0.022 Sum_probs=24.0
Q ss_pred HHHhcCCccEEEeecCchhhhHHHHHHHhCCCEEEE
Q 024917 120 ERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPM 155 (260)
Q Consensus 120 ~~i~~~~iDvVVgve~rG~~lA~~LA~~Lgvp~v~i 155 (260)
..+++.++|+|++.-.---..+...|+.+|+|++..
T Consensus 86 ~~l~~~~PDvVi~~g~~~s~p~~laA~~~~iP~vih 121 (365)
T 3s2u_A 86 RVIRQLRPVCVLGLGGYVTGPGGLAARLNGVPLVIH 121 (365)
T ss_dssp HHHHHHCCSEEEECSSSTHHHHHHHHHHTTCCEEEE
T ss_pred HHHHhcCCCEEEEcCCcchHHHHHHHHHcCCCEEEE
Confidence 445566899999864322233445588899998764
No 70
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=36.71 E-value=46 Score=23.81 Aligned_cols=30 Identities=30% Similarity=0.269 Sum_probs=17.4
Q ss_pred CCCeEEEEeeeccchHHHHHHHHHHHhCCCcEE
Q 024917 188 AGERALIVDDLVATGGTLSAAIRLLGSFQNHIF 220 (260)
Q Consensus 188 ~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV 220 (260)
++.+||||||=-.... ...++|++.|..+.
T Consensus 5 ~~~~ilivdd~~~~~~---~l~~~L~~~g~~v~ 34 (132)
T 3lte_A 5 QSKRILVVDDDQAMAA---AIERVLKRDHWQVE 34 (132)
T ss_dssp --CEEEEECSCHHHHH---HHHHHHHHTTCEEE
T ss_pred CCccEEEEECCHHHHH---HHHHHHHHCCcEEE
Confidence 4568999998554443 34455566676544
No 71
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*
Probab=36.56 E-value=1.2e+02 Score=26.45 Aligned_cols=72 Identities=8% Similarity=0.017 Sum_probs=44.2
Q ss_pred hhhhHHHHHHHhCCCEEEEecCCCCCCceeeeeeeecccceeEEEEecccCCCCeEEEEeeeccc-hHH--HHHHHHHHH
Q 024917 137 GFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVAT-GGT--LSAAIRLLG 213 (260)
Q Consensus 137 G~~lA~~LA~~Lgvp~v~iRK~~kl~~~~~s~~y~~e~g~~~lel~~~~i~~GkrVLIVDDVltT-G~T--l~aa~~LL~ 213 (260)
--.+|..+|+.||+|+..+...+ +..|+-.+++. .-.+|+.|.||-..... -.- +.-+++.++
T Consensus 9 ~~~la~~ia~~l~~~l~~~~~~~------------F~dGE~~v~i~--~~vrg~dv~iiqs~~~pn~~lmell~~~~a~~ 74 (284)
T 1u9y_A 9 SQNLAFKVAKLLNTKLTRVEYKR------------FPDNEIYVRIV--DEINDDEAVIINTQKNQNDAIVETILLCDALR 74 (284)
T ss_dssp CHHHHHHHHHHTTCCEECEEEEE------------CTTCCEEEEEC--SCCCSSEEEEECCCSSHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCeeeeeEEEE------------CCCCCEEEEeC--CCCCCCEEEEEeCCCCCcHHHHHHHHHHHHHH
Confidence 44789999999999985433211 12233333332 22479999999876542 122 233567788
Q ss_pred hCCCcEEEE
Q 024917 214 SFQNHIFIL 222 (260)
Q Consensus 214 ~~Ga~vV~~ 222 (260)
++||+.+.+
T Consensus 75 ~~~a~~i~~ 83 (284)
T 1u9y_A 75 DEGVKKITL 83 (284)
T ss_dssp TTTCCEEEE
T ss_pred HcCCceEEE
Confidence 999987654
No 72
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=35.25 E-value=52 Score=26.42 Aligned_cols=29 Identities=28% Similarity=0.300 Sum_probs=19.9
Q ss_pred CCCCeEEEEeeeccchHHHHHHHHHHHhCCCc
Q 024917 187 QAGERALIVDDLVATGGTLSAAIRLLGSFQNH 218 (260)
Q Consensus 187 ~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~ 218 (260)
.++.+||||||=-.. ...+.++|++.|..
T Consensus 59 ~~~~~ILiVdDd~~~---~~~l~~~L~~~g~~ 87 (206)
T 3mm4_A 59 LRGKRVLVVDDNFIS---RKVATGKLKKMGVS 87 (206)
T ss_dssp TTTCEEEEECSCHHH---HHHHHHHHHHTTCS
T ss_pred cCCCEEEEEeCCHHH---HHHHHHHHHHcCCC
Confidence 467899999996544 34455667777763
No 73
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=33.92 E-value=79 Score=28.06 Aligned_cols=41 Identities=15% Similarity=0.154 Sum_probs=28.9
Q ss_pred HHHHHHHHHhcCCccEEEeecCchhhhHHHHHHHhCCCEEEEe
Q 024917 114 TIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMR 156 (260)
Q Consensus 114 l~~~La~~i~~~~iDvVVgve~rG~~lA~~LA~~Lgvp~v~iR 156 (260)
..+.+.+.+++.++|+|++-.. +..+..+|+.+|+|.+...
T Consensus 97 ~~~~l~~~l~~~~pD~VI~d~~--~~~~~~~A~~lgIP~v~~~ 137 (424)
T 2iya_A 97 VLPQLEDAYADDRPDLIVYDIA--SWPAPVLGRKWDIPFVQLS 137 (424)
T ss_dssp HHHHHHHHTTTSCCSEEEEETT--CTHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHhccCCCEEEEcCc--ccHHHHHHHhcCCCEEEEe
Confidence 3444555566678999998542 3467889999999987543
No 74
>1dcf_A ETR1 protein; beta-alpha five sandwich, transferase; 2.50A {Arabidopsis thaliana} SCOP: c.23.1.2
Probab=33.47 E-value=61 Score=23.40 Aligned_cols=30 Identities=17% Similarity=0.165 Sum_probs=19.7
Q ss_pred CCCeEEEEeeeccchHHHHHHHHHHHhCCCcEE
Q 024917 188 AGERALIVDDLVATGGTLSAAIRLLGSFQNHIF 220 (260)
Q Consensus 188 ~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV 220 (260)
++.+||||||=-.....+ .++|++.|.++.
T Consensus 6 ~~~~ILivdd~~~~~~~l---~~~L~~~g~~v~ 35 (136)
T 1dcf_A 6 TGLKVLVMDENGVSRMVT---KGLLVHLGCEVT 35 (136)
T ss_dssp TTCEEEEECSCHHHHHHH---HHHHHHTTCEEE
T ss_pred CCCeEEEEeCCHHHHHHH---HHHHHHcCCeEE
Confidence 567899999976554444 445556676543
No 75
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=33.36 E-value=64 Score=28.24 Aligned_cols=38 Identities=13% Similarity=-0.092 Sum_probs=26.7
Q ss_pred HHHHHHHhcCCccEEEeecCchhhhHHHHHHHhCCCEEEE
Q 024917 116 DLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPM 155 (260)
Q Consensus 116 ~~La~~i~~~~iDvVVgve~rG~~lA~~LA~~Lgvp~v~i 155 (260)
..+.+.+++.++|+|++-. ...-+...|+.+|+|++..
T Consensus 120 ~~l~~~l~~~~pDvVv~~~--~~~~~~~aa~~~giP~v~~ 157 (412)
T 3otg_A 120 DELQPVIERLRPDLVVQEI--SNYGAGLAALKAGIPTICH 157 (412)
T ss_dssp HHHHHHHHHHCCSEEEEET--TCHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHhcCCCEEEECc--hhhHHHHHHHHcCCCEEEe
Confidence 4455556666899998862 3344677889999998764
No 76
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=33.31 E-value=65 Score=21.96 Aligned_cols=29 Identities=7% Similarity=0.174 Sum_probs=16.5
Q ss_pred CCeEEEEeeeccchHHHHHHHHHHHhCCCcEE
Q 024917 189 GERALIVDDLVATGGTLSAAIRLLGSFQNHIF 220 (260)
Q Consensus 189 GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV 220 (260)
+++||||||=-... ....+.|++.|.++.
T Consensus 1 ~~~iliv~~~~~~~---~~l~~~l~~~g~~v~ 29 (119)
T 2j48_A 1 AGHILLLEEEDEAA---TVVCEMLTAAGFKVI 29 (119)
T ss_dssp CCEEEEECCCHHHH---HHHHHHHHHTTCEEE
T ss_pred CCEEEEEeCCHHHH---HHHHHHHHhCCcEEE
Confidence 35788888754433 334445556666544
No 77
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=32.94 E-value=50 Score=25.11 Aligned_cols=39 Identities=18% Similarity=0.256 Sum_probs=34.0
Q ss_pred ccCCCCeEEEEeeeccchHHHHHHHHHHHhCCCcEEEEE
Q 024917 185 AVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILI 223 (260)
Q Consensus 185 ~i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~~a 223 (260)
.+..|++|+=|++.-..+-|...+.++|+..+...+...
T Consensus 75 gL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~v~l~ 113 (130)
T 1i16_A 75 TVQPGDEILQLGGTAMQGLTRFEAWNIIKALPDGPVTIV 113 (130)
T ss_dssp CCCTTCCEEECSSCBGGGSCHHHHHHHHHTSCSSEEEEE
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCceEEEE
Confidence 577999999999999999999999999999987766543
No 78
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=32.52 E-value=1e+02 Score=27.31 Aligned_cols=41 Identities=15% Similarity=0.111 Sum_probs=28.9
Q ss_pred HHHHHHHHHhcCCccEEEeecCchhhhHHHHHHHhCCCEEEEe
Q 024917 114 TIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMR 156 (260)
Q Consensus 114 l~~~La~~i~~~~iDvVVgve~rG~~lA~~LA~~Lgvp~v~iR 156 (260)
....+.+.+++.++|+|++-. .+ ..+..+|+.+|+|.+..-
T Consensus 92 ~~~~l~~~l~~~~pD~Vi~d~-~~-~~~~~~A~~~giP~v~~~ 132 (430)
T 2iyf_A 92 ALPQLADAYADDIPDLVLHDI-TS-YPARVLARRWGVPAVSLS 132 (430)
T ss_dssp HHHHHHHHHTTSCCSEEEEET-TC-HHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHhhccCCCEEEECC-cc-HHHHHHHHHcCCCEEEEe
Confidence 344455666667899999743 23 367788999999987554
No 79
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=32.09 E-value=60 Score=24.27 Aligned_cols=29 Identities=17% Similarity=0.139 Sum_probs=18.2
Q ss_pred CCCeEEEEeeeccchHHHHHHHHHHHhCCCcE
Q 024917 188 AGERALIVDDLVATGGTLSAAIRLLGSFQNHI 219 (260)
Q Consensus 188 ~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~v 219 (260)
++.+||||||=-.. .....+.|++.|.++
T Consensus 6 ~~~~ILivdd~~~~---~~~l~~~L~~~g~~v 34 (154)
T 3gt7_A 6 RAGEILIVEDSPTQ---AEHLKHILEETGYQT 34 (154)
T ss_dssp -CCEEEEECSCHHH---HHHHHHHHHTTTCEE
T ss_pred CCCcEEEEeCCHHH---HHHHHHHHHHCCCEE
Confidence 45689999985544 344455666777654
No 80
>2le3_A Carnitine O-palmitoyltransferase 1, liver isoform; membrane protein, amphiphilic structure, membrane-protein interaction, structural switch; NMR {Homo sapiens}
Probab=32.07 E-value=14 Score=23.95 Aligned_cols=12 Identities=50% Similarity=0.886 Sum_probs=9.9
Q ss_pred eeeeeecccccC
Q 024917 247 TQFTITSEGVDA 258 (260)
Q Consensus 247 ~~~~~~~~~~~~ 258 (260)
-+|++|+||+|.
T Consensus 10 f~ftvt~eG~~~ 21 (42)
T 2le3_A 10 FQFTVTPDGIDL 21 (42)
T ss_dssp EEEEEETTEEEE
T ss_pred eeeeecCCCccc
Confidence 479999999874
No 81
>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A*
Probab=31.97 E-value=1e+02 Score=27.30 Aligned_cols=71 Identities=8% Similarity=0.014 Sum_probs=41.9
Q ss_pred hhhhHHHHHHHhCCCEEEEecCCCCCCceeeeeeeecccceeEEEEecccCCCCeEEEEeeeccc-hHH---HHHHHHHH
Q 024917 137 GFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVAT-GGT---LSAAIRLL 212 (260)
Q Consensus 137 G~~lA~~LA~~Lgvp~v~iRK~~kl~~~~~s~~y~~e~g~~~lel~~~~i~~GkrVLIVDDVltT-G~T---l~aa~~LL 212 (260)
.-.+|..+|+.||+|+..+.-. ++..|+-.+++... |+.|.||--.... -.. +.-+++.+
T Consensus 9 ~~~la~~ia~~lg~~l~~~~~~------------~F~dGE~~v~i~e~----g~dV~iiqs~~~p~nd~lmeLl~~ida~ 72 (286)
T 3lrt_A 9 SLKLAARIAEELKTEPVMPDER------------RFPDGELYLRYDED----LTGHNIFIIGNTHSDAEVMEMILTLSAI 72 (286)
T ss_dssp GHHHHHHHHHHTTSCEECCEEE------------ECTTSCEEEECCSC----CTTSEEEEECCCCSHHHHHHHHHHHHHG
T ss_pred CHHHHHHHHHHhCCCeeeeEEE------------ECCCCCEEEEEcCC----CCcEEEEEeCCCCCcHHHHHHHHHHHHH
Confidence 3478999999999998532211 11234333333222 8888888654321 122 23356777
Q ss_pred HhCCCcEEEEE
Q 024917 213 GSFQNHIFILI 223 (260)
Q Consensus 213 ~~~Ga~vV~~a 223 (260)
+++||+.+...
T Consensus 73 k~~~A~~it~V 83 (286)
T 3lrt_A 73 QDYRTKSVNII 83 (286)
T ss_dssp GGSCCSEEEEE
T ss_pred HHcCCCEEEEE
Confidence 89999877543
No 82
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=31.87 E-value=66 Score=23.13 Aligned_cols=31 Identities=29% Similarity=0.119 Sum_probs=19.9
Q ss_pred CCCeEEEEeeeccchHHHHHHHHHHHhCCCcEEE
Q 024917 188 AGERALIVDDLVATGGTLSAAIRLLGSFQNHIFI 221 (260)
Q Consensus 188 ~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~ 221 (260)
+..+||||||=-.... ...+.|++.|.+++.
T Consensus 6 ~~~~ilivdd~~~~~~---~l~~~L~~~g~~v~~ 36 (136)
T 3hdv_A 6 ARPLVLVVDDNAVNRE---ALILYLKSRGIDAVG 36 (136)
T ss_dssp -CCEEEEECSCHHHHH---HHHHHHHHTTCCEEE
T ss_pred CCCeEEEECCCHHHHH---HHHHHHHHcCceEEE
Confidence 3568999999655444 445556667776654
No 83
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=31.71 E-value=49 Score=24.01 Aligned_cols=33 Identities=15% Similarity=0.089 Sum_probs=26.6
Q ss_pred cCCCCeEEEEeeeccchHHHHHHHHHHHhCCCcEEE
Q 024917 186 VQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFI 221 (260)
Q Consensus 186 i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~ 221 (260)
+.+++.|+++++ +|.....+...|++.|-+.|.
T Consensus 49 l~~~~~ivvyc~---~g~rs~~a~~~L~~~G~~~v~ 81 (106)
T 3hix_A 49 LEKSRDIYVYGA---GDEQTSQAVNLLRSAGFEHVS 81 (106)
T ss_dssp SCTTSCEEEECS---SHHHHHHHHHHHHHTTCSCEE
T ss_pred CCCCCeEEEEEC---CCChHHHHHHHHHHcCCcCEE
Confidence 456788999975 788888899999999987543
No 84
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=31.00 E-value=63 Score=24.26 Aligned_cols=29 Identities=31% Similarity=0.263 Sum_probs=20.3
Q ss_pred CCeEEEEeeeccchHHHHHHHHHHHhCCCcEE
Q 024917 189 GERALIVDDLVATGGTLSAAIRLLGSFQNHIF 220 (260)
Q Consensus 189 GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV 220 (260)
..+||||||=-. ......++|++.|.+++
T Consensus 36 ~~~Ilivdd~~~---~~~~l~~~L~~~g~~v~ 64 (157)
T 3hzh_A 36 PFNVLIVDDSVF---TVKQLTQIFTSEGFNII 64 (157)
T ss_dssp ECEEEEECSCHH---HHHHHHHHHHHTTCEEE
T ss_pred ceEEEEEeCCHH---HHHHHHHHHHhCCCeEE
Confidence 358999999553 44555666777887775
No 85
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=30.97 E-value=76 Score=27.84 Aligned_cols=38 Identities=16% Similarity=0.151 Sum_probs=25.9
Q ss_pred HHHHHHHhcCCccEEEeecCchhhhHHHHHHHhCCCEEEE
Q 024917 116 DLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPM 155 (260)
Q Consensus 116 ~~La~~i~~~~iDvVVgve~rG~~lA~~LA~~Lgvp~v~i 155 (260)
..+.+.+++.++|+|++-. ....+..+|+.+|+|++..
T Consensus 113 ~~l~~~~~~~~pDlVv~d~--~~~~~~~~a~~~giP~v~~ 150 (398)
T 4fzr_A 113 DEALALAERWKPDLVLTET--YSLTGPLVAATLGIPWIEQ 150 (398)
T ss_dssp HHHHHHHHHHCCSEEEEET--TCTHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHhCCCCEEEECc--cccHHHHHHHhhCCCEEEe
Confidence 3444555566899998643 2344677889999998753
No 86
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=30.70 E-value=65 Score=24.02 Aligned_cols=44 Identities=7% Similarity=0.063 Sum_probs=35.6
Q ss_pred cccCCCCeEEEEeeeccchHHHHHHHHHHHhCCCcEEEEEEEEe
Q 024917 184 GAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQM 227 (260)
Q Consensus 184 ~~i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~~avlve 227 (260)
+.+..|+.|+=|++.-..|-|-..+.++|++......-...+++
T Consensus 45 g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~~g~~~~L~lv~ 88 (95)
T 3gge_A 45 KTICVGDHIESINGENIVGWRHYDVAKKLKELKKEELFTMKLIE 88 (95)
T ss_dssp TTCCTTCEEEEETTEECTTCCHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred CCCCCCCEEEEECCEEccCCCHHHHHHHHHhCCCCCEEEEEEEC
Confidence 35789999999999999999999999999997554444444544
No 87
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=30.44 E-value=81 Score=27.44 Aligned_cols=38 Identities=13% Similarity=0.171 Sum_probs=26.0
Q ss_pred HHHHHHHhcCCccEEEeecCchhhhHHHHHHHhCCCEEEE
Q 024917 116 DLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPM 155 (260)
Q Consensus 116 ~~La~~i~~~~iDvVVgve~rG~~lA~~LA~~Lgvp~v~i 155 (260)
..+.+.+++.++|+|++-.. ...+..+|+.+|+|++..
T Consensus 97 ~~l~~~l~~~~pD~Vi~~~~--~~~~~~~a~~~giP~v~~ 134 (384)
T 2p6p_A 97 PRMLDFSRAWRPDLIVGGTM--SYVAPLLALHLGVPHARQ 134 (384)
T ss_dssp HHHHHHHHHHCCSEEEEETT--CTHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHhccCCcEEEECcc--hhhHHHHHHhcCCCEEEe
Confidence 33444455568999998543 345677899999998754
No 88
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=30.25 E-value=56 Score=24.18 Aligned_cols=30 Identities=27% Similarity=0.296 Sum_probs=15.9
Q ss_pred CCCeEEEEeeeccchHHHHHHHHHHHhCCCcEE
Q 024917 188 AGERALIVDDLVATGGTLSAAIRLLGSFQNHIF 220 (260)
Q Consensus 188 ~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV 220 (260)
++.+||||||=-.. .....++|++.|..+.
T Consensus 13 ~~~~iLivdd~~~~---~~~l~~~L~~~g~~v~ 42 (143)
T 3m6m_D 13 RSMRMLVADDHEAN---RMVLQRLLEKAGHKVL 42 (143)
T ss_dssp --CEEEEECSSHHH---HHHHHHHHHC--CEEE
T ss_pred ccceEEEEeCCHHH---HHHHHHHHHHcCCeEE
Confidence 45689999985443 3344455666666543
No 89
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=30.15 E-value=2.8e+02 Score=24.87 Aligned_cols=75 Identities=9% Similarity=0.091 Sum_probs=45.4
Q ss_pred CchhhhHHHHHHHhCCCEEEEecCCCCCCceeeeeeeecccceeEEEEecccCCCCeEEEEeeeccch-HH---HHHHHH
Q 024917 135 ARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATG-GT---LSAAIR 210 (260)
Q Consensus 135 ~rG~~lA~~LA~~Lgvp~v~iRK~~kl~~~~~s~~y~~e~g~~~lel~~~~i~~GkrVLIVDDVltTG-~T---l~aa~~ 210 (260)
...-.+|..+|..||+|+..+.-. ++..|+-.+++. .-.+|+.|.||-.....- .. +.-+++
T Consensus 14 ~~~~~La~~ia~~lg~~l~~~~~~------------~F~dGE~~v~i~--esvrg~dV~iiqs~~~p~nd~lmeLl~~id 79 (319)
T 3dah_A 14 NANPALAQEVVKILGIPLGKAMVS------------RFSDGEIQVEIQ--ENVRGKDVFVLQSTCAPTNDNLMELMIMVD 79 (319)
T ss_dssp SSCHHHHHHHHHHHTSCCCCEEEE------------ECTTSCEEEEEC--SCCBTCEEEEECCCCSSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhCCceeeeEEE------------ECCCCCEEEEEC--CCcCCCeEEEEccCCCCCcHHHHHHHHHHH
Confidence 444589999999999986432211 112343333332 224799999996654321 11 334667
Q ss_pred HHHhCCCcEEEEE
Q 024917 211 LLGSFQNHIFILI 223 (260)
Q Consensus 211 LL~~~Ga~vV~~a 223 (260)
.++++||+.+.++
T Consensus 80 A~k~asA~rIt~V 92 (319)
T 3dah_A 80 ALKRASAGRITAA 92 (319)
T ss_dssp HHHHTTBSEEEEE
T ss_pred HHHHcCCcEEEEE
Confidence 7889999887643
No 90
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=30.12 E-value=58 Score=29.34 Aligned_cols=34 Identities=12% Similarity=-0.021 Sum_probs=25.4
Q ss_pred HHHhcCCccEEEeecCchhhhHHHHHHHhCCCEEEE
Q 024917 120 ERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPM 155 (260)
Q Consensus 120 ~~i~~~~iDvVVgve~rG~~lA~~LA~~Lgvp~v~i 155 (260)
+.+++.++|+|++-. ++..+..+|+.+|+|++..
T Consensus 138 ~~~~~~~pDlVv~d~--~~~~~~~aA~~lgiP~v~~ 171 (441)
T 2yjn_A 138 SFCRKWRPDLVIWEP--LTFAAPIAAAVTGTPHARL 171 (441)
T ss_dssp HHHHHHCCSEEEECT--TCTHHHHHHHHHTCCEEEE
T ss_pred HHHHhcCCCEEEecC--cchhHHHHHHHcCCCEEEE
Confidence 334445899999764 3467788999999998765
No 91
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=30.05 E-value=75 Score=23.13 Aligned_cols=29 Identities=21% Similarity=0.067 Sum_probs=18.3
Q ss_pred CCeEEEEeeeccchHHHHHHHHHHHhCCCcEE
Q 024917 189 GERALIVDDLVATGGTLSAAIRLLGSFQNHIF 220 (260)
Q Consensus 189 GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV 220 (260)
..+||||||=-.... ...++|++.|.++.
T Consensus 4 ~~~iLivdd~~~~~~---~l~~~L~~~g~~v~ 32 (136)
T 3t6k_A 4 PHTLLIVDDDDTVAE---MLELVLRGAGYEVR 32 (136)
T ss_dssp CCEEEEECSCHHHHH---HHHHHHHHTTCEEE
T ss_pred CCEEEEEeCCHHHHH---HHHHHHHHCCCEEE
Confidence 458999998655444 34455666776544
No 92
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=29.55 E-value=49 Score=24.42 Aligned_cols=39 Identities=8% Similarity=0.215 Sum_probs=33.1
Q ss_pred ccCCCCeEEEEeeeccchHHHHHHHHHHHhCC---CcEEEEE
Q 024917 185 AVQAGERALIVDDLVATGGTLSAAIRLLGSFQ---NHIFILI 223 (260)
Q Consensus 185 ~i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~G---a~vV~~a 223 (260)
.+..|++|+=||+.-.++.|...+.++|++.+ .+.+.+.
T Consensus 59 ~l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~~~r~~~~~~l~ 100 (109)
T 1wi4_A 59 RLKPGDQLVSINKESMIGVSFEEAKSIITRAKLRSESPWEIA 100 (109)
T ss_dssp SCCTTCBEEEETTSCCTTCCHHHHHHHHHHSCCSSSSCEEEE
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHccccCCCceEEEE
Confidence 37899999999999999999999999999987 5555543
No 93
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=29.51 E-value=60 Score=23.30 Aligned_cols=29 Identities=17% Similarity=0.127 Sum_probs=17.8
Q ss_pred CCCeEEEEeeeccchHHHHHHHHHHHhCCCcE
Q 024917 188 AGERALIVDDLVATGGTLSAAIRLLGSFQNHI 219 (260)
Q Consensus 188 ~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~v 219 (260)
.+.+||||||=-.... ...+.|++.|...
T Consensus 4 ~~~~iLivdd~~~~~~---~l~~~L~~~g~~~ 32 (129)
T 3h1g_A 4 GSMKLLVVDDSSTMRR---IIKNTLSRLGYED 32 (129)
T ss_dssp --CCEEEECSCHHHHH---HHHHHHHHTTCCC
T ss_pred CCcEEEEEeCCHHHHH---HHHHHHHHcCCcE
Confidence 3458999999654443 4455667777753
No 94
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=29.42 E-value=48 Score=24.34 Aligned_cols=32 Identities=16% Similarity=0.098 Sum_probs=21.3
Q ss_pred CCCCeEEEEeeeccchHHHHHHHHHHHhCC-CcEEE
Q 024917 187 QAGERALIVDDLVATGGTLSAAIRLLGSFQ-NHIFI 221 (260)
Q Consensus 187 ~~GkrVLIVDDVltTG~Tl~aa~~LL~~~G-a~vV~ 221 (260)
.++.+||||||=-.... ...++|++.| .+++.
T Consensus 18 ~~~~~ilivdd~~~~~~---~l~~~L~~~g~~~v~~ 50 (146)
T 4dad_A 18 QGMINILVASEDASRLA---HLARLVGDAGRYRVTR 50 (146)
T ss_dssp GGGCEEEEECSCHHHHH---HHHHHHHHHCSCEEEE
T ss_pred CCCCeEEEEeCCHHHHH---HHHHHHhhCCCeEEEE
Confidence 35679999999665444 4455666677 55554
No 95
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=29.28 E-value=78 Score=22.84 Aligned_cols=29 Identities=17% Similarity=-0.001 Sum_probs=18.3
Q ss_pred CCCeEEEEeeeccchHHHHHHHHHHHhCCCcE
Q 024917 188 AGERALIVDDLVATGGTLSAAIRLLGSFQNHI 219 (260)
Q Consensus 188 ~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~v 219 (260)
+..+||||||=-... ....+.|++.|.++
T Consensus 5 ~~~~iLivdd~~~~~---~~l~~~l~~~g~~v 33 (140)
T 3grc_A 5 PRPRILICEDDPDIA---RLLNLMLEKGGFDS 33 (140)
T ss_dssp CCSEEEEECSCHHHH---HHHHHHHHHTTCEE
T ss_pred CCCCEEEEcCCHHHH---HHHHHHHHHCCCeE
Confidence 346899999865443 34445566677654
No 96
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=27.92 E-value=92 Score=28.03 Aligned_cols=44 Identities=9% Similarity=-0.082 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHhcCCccEEEeecCchhhhH-HHHHHHhCCCEEEE
Q 024917 112 RDTIDLFVERYKDKNISVVAGIEARGFIFG-PPIALAIGAKFVPM 155 (260)
Q Consensus 112 ~~l~~~La~~i~~~~iDvVVgve~rG~~lA-~~LA~~Lgvp~v~i 155 (260)
..+...+.+.+++.++|+|++.......++ ...|+.+|+|++..
T Consensus 97 ~~~~~~l~~~l~~~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~ 141 (396)
T 3dzc_A 97 SKILLGMQQVLSSEQPDVVLVHGDTATTFAASLAAYYQQIPVGHV 141 (396)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHTTTCCEEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCchhHHHHHHHHHHhCCCEEEE
Confidence 344455556666678999999876666444 56678889998654
No 97
>2ayx_A Sensor kinase protein RCSC; two independent structural domains, transferase; NMR {Escherichia coli} SCOP: c.23.1.1 c.23.1.6 PDB: 2ayz_A 2ayy_A
Probab=27.90 E-value=37 Score=28.47 Aligned_cols=32 Identities=9% Similarity=-0.069 Sum_probs=23.7
Q ss_pred CCCCeEEEEeeeccchHHHHHHHHHHHhCCCcEEE
Q 024917 187 QAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFI 221 (260)
Q Consensus 187 ~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~ 221 (260)
..|++||||||=-+. .....+.|+..|.++..
T Consensus 9 l~~~~vlvv~d~~~~---~~~l~~~L~~~g~~v~~ 40 (254)
T 2ayx_A 9 LSGKRCWLAVRNASL---CQFLETSLQRSGIVVTT 40 (254)
T ss_dssp TTTEEEEEECCCHHH---HHHHHHHHTTTTEEEEE
T ss_pred cCCCEEEEEcCCHHH---HHHHHHHHHHCCCEEEE
Confidence 589999999996543 44456678888987754
No 98
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=27.29 E-value=1.1e+02 Score=21.62 Aligned_cols=30 Identities=17% Similarity=0.197 Sum_probs=25.4
Q ss_pred ccCCCCeEEEEeeeccchHHHHHHHHHHHhCCC
Q 024917 185 AVQAGERALIVDDLVATGGTLSAAIRLLGSFQN 217 (260)
Q Consensus 185 ~i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga 217 (260)
.+.+++.|+++. .+|.....+...|++.|.
T Consensus 52 ~l~~~~~ivvyC---~~g~rs~~a~~~L~~~G~ 81 (100)
T 3foj_A 52 YFNDNETYYIIC---KAGGRSAQVVQYLEQNGV 81 (100)
T ss_dssp GSCTTSEEEEEC---SSSHHHHHHHHHHHTTTC
T ss_pred hCCCCCcEEEEc---CCCchHHHHHHHHHHCCC
Confidence 345788999987 688888899999999998
No 99
>3kyj_B CHEY6 protein, putative histidine protein kinase; protein-protein interaction, histidine kinase, response regulator, phosphorylation; 1.40A {Rhodobacter sphaeroides} PDB: 3kyi_B*
Probab=26.92 E-value=57 Score=23.90 Aligned_cols=30 Identities=13% Similarity=0.168 Sum_probs=17.0
Q ss_pred CCCeEEEEeeeccchHHHHHHHHHHHhC-CCcEE
Q 024917 188 AGERALIVDDLVATGGTLSAAIRLLGSF-QNHIF 220 (260)
Q Consensus 188 ~GkrVLIVDDVltTG~Tl~aa~~LL~~~-Ga~vV 220 (260)
++.+||||||=-. ......++|++. |..++
T Consensus 12 ~~~~vlivdd~~~---~~~~l~~~L~~~~~~~~v 42 (145)
T 3kyj_B 12 SPYNVMIVDDAAM---MRLYIASFIKTLPDFKVV 42 (145)
T ss_dssp CSEEEEEECSCHH---HHHHHHHHHTTCTTEEEE
T ss_pred CCCeEEEEcCCHH---HHHHHHHHHHhCCCceEE
Confidence 4567888888543 333444555555 44444
No 100
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=26.83 E-value=71 Score=23.14 Aligned_cols=29 Identities=21% Similarity=0.186 Sum_probs=19.1
Q ss_pred CCeEEEEeeeccchHHHHHHHHHHHhCCCcEE
Q 024917 189 GERALIVDDLVATGGTLSAAIRLLGSFQNHIF 220 (260)
Q Consensus 189 GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV 220 (260)
..+||||||=-... ....++|++.|.++.
T Consensus 6 ~~~ilivdd~~~~~---~~l~~~L~~~g~~v~ 34 (136)
T 3kto_A 6 HPIIYLVDHQKDAR---AALSKLLSPLDVTIQ 34 (136)
T ss_dssp -CEEEEECSCHHHH---HHHHHHHTTSSSEEE
T ss_pred CCeEEEEcCCHHHH---HHHHHHHHHCCcEEE
Confidence 46899999965444 445566777787655
No 101
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=26.75 E-value=99 Score=28.00 Aligned_cols=45 Identities=9% Similarity=-0.067 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHhcCCccEEEeecCchhhhH-HHHHHHhCCCEEEE
Q 024917 111 FRDTIDLFVERYKDKNISVVAGIEARGFIFG-PPIALAIGAKFVPM 155 (260)
Q Consensus 111 ~~~l~~~La~~i~~~~iDvVVgve~rG~~lA-~~LA~~Lgvp~v~i 155 (260)
+..+...+.+.+++.++|+|++.......++ ...|+.+|+|++..
T Consensus 99 ~~~~~~~l~~~l~~~kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~ 144 (403)
T 3ot5_A 99 TSRVMNGINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQKMLGHV 144 (403)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCEEEEECCchhHHHHHHHHHHhCCCEEEE
Confidence 3344455556666678999999987666664 56778899998654
No 102
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=26.68 E-value=64 Score=22.88 Aligned_cols=27 Identities=30% Similarity=0.326 Sum_probs=15.5
Q ss_pred CeEEEEeeeccchHHHHHHHHHHHhCCCcE
Q 024917 190 ERALIVDDLVATGGTLSAAIRLLGSFQNHI 219 (260)
Q Consensus 190 krVLIVDDVltTG~Tl~aa~~LL~~~Ga~v 219 (260)
.+||||||=-.... ...+.|++.|.++
T Consensus 4 ~~ilivdd~~~~~~---~l~~~L~~~g~~v 30 (127)
T 3i42_A 4 QQALIVEDYQAAAE---TFKELLEMLGFQA 30 (127)
T ss_dssp EEEEEECSCHHHHH---HHHHHHHHTTEEE
T ss_pred ceEEEEcCCHHHHH---HHHHHHHHcCCCE
Confidence 47888888544333 3444555666543
No 103
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=26.31 E-value=61 Score=25.05 Aligned_cols=33 Identities=15% Similarity=0.089 Sum_probs=26.8
Q ss_pred cCCCCeEEEEeeeccchHHHHHHHHHHHhCCCcEEE
Q 024917 186 VQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFI 221 (260)
Q Consensus 186 i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~ 221 (260)
+.+++.|+++++ +|.....+...|++.|-+.|.
T Consensus 53 l~~~~~ivvyC~---~g~rs~~aa~~L~~~G~~~v~ 85 (141)
T 3ilm_A 53 LEKSRDIYVYGA---GDEQTSQAVNLLRSAGFEHVS 85 (141)
T ss_dssp SCTTSEEEEECS---SHHHHHHHHHHHHHTTCCSEE
T ss_pred CCCCCeEEEEEC---CChHHHHHHHHHHHcCCCCEE
Confidence 457788999876 788888899999999987543
No 104
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=25.84 E-value=97 Score=21.16 Aligned_cols=32 Identities=9% Similarity=0.095 Sum_probs=25.9
Q ss_pred CCCCeEEEEeeeccchHHHHHHHHHHHhCCCcEEE
Q 024917 187 QAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFI 221 (260)
Q Consensus 187 ~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~ 221 (260)
.+++.|+++.+ +|.....+...|++.|-+.+.
T Consensus 39 ~~~~~ivv~C~---~g~rs~~aa~~L~~~G~~~v~ 70 (85)
T 2jtq_A 39 DKNDTVKVYCN---AGRQSGQAKEILSEMGYTHVE 70 (85)
T ss_dssp CTTSEEEEEES---SSHHHHHHHHHHHHTTCSSEE
T ss_pred CCCCcEEEEcC---CCchHHHHHHHHHHcCCCCEE
Confidence 57788999985 688888889999999987554
No 105
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=25.67 E-value=1e+02 Score=21.83 Aligned_cols=26 Identities=15% Similarity=0.069 Sum_probs=16.2
Q ss_pred CCeEEEEeeeccchHHHHHHHHHHHhCCC
Q 024917 189 GERALIVDDLVATGGTLSAAIRLLGSFQN 217 (260)
Q Consensus 189 GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga 217 (260)
+.+||||||=-.... ...+.|++.|.
T Consensus 2 ~~~ilivdd~~~~~~---~l~~~L~~~~~ 27 (140)
T 1k68_A 2 HKKIFLVEDNKADIR---LIQEALANSTV 27 (140)
T ss_dssp CCEEEEECCCHHHHH---HHHHHHHTCSS
T ss_pred CCeEEEEeCCHHHHH---HHHHHHHhcCC
Confidence 568899988654443 34445566665
No 106
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=25.36 E-value=57 Score=24.12 Aligned_cols=28 Identities=18% Similarity=0.137 Sum_probs=17.2
Q ss_pred CCCCeEEEEeeeccchHHHHHHHHHHHhCCC
Q 024917 187 QAGERALIVDDLVATGGTLSAAIRLLGSFQN 217 (260)
Q Consensus 187 ~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga 217 (260)
.++.+||||||=-... ....++|++.|.
T Consensus 13 ~~~~~iLivdd~~~~~---~~l~~~L~~~~~ 40 (152)
T 3eul_A 13 PEKVRVVVGDDHPLFR---EGVVRALSLSGS 40 (152)
T ss_dssp -CCEEEEEECSSHHHH---HHHHHHHHHHSS
T ss_pred CceEEEEEEcCCHHHH---HHHHHHHhhCCC
Confidence 3667899999854443 334455566663
No 107
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=25.22 E-value=1e+02 Score=22.11 Aligned_cols=30 Identities=13% Similarity=0.081 Sum_probs=19.1
Q ss_pred CCCCeEEEEeeeccchHHHHHHHHHHHhCCCcE
Q 024917 187 QAGERALIVDDLVATGGTLSAAIRLLGSFQNHI 219 (260)
Q Consensus 187 ~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~v 219 (260)
.++.+||||||=-..... ..+.|++.|.++
T Consensus 13 ~~~~~ilivdd~~~~~~~---l~~~L~~~g~~v 42 (138)
T 2b4a_A 13 MQPFRVTLVEDEPSHATL---IQYHLNQLGAEV 42 (138)
T ss_dssp -CCCEEEEECSCHHHHHH---HHHHHHHTTCEE
T ss_pred CCCCeEEEECCCHHHHHH---HHHHHHHcCCEE
Confidence 467789999987655444 445556667643
No 108
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=25.06 E-value=81 Score=27.49 Aligned_cols=45 Identities=13% Similarity=-0.025 Sum_probs=30.1
Q ss_pred cCHHHHHHHHHHHHHHHhcCCccEEEeecCc----hhhhHHHHHHHhCCCEE
Q 024917 106 LDTKAFRDTIDLFVERYKDKNISVVAGIEAR----GFIFGPPIALAIGAKFV 153 (260)
Q Consensus 106 ~dp~~~~~l~~~La~~i~~~~iDvVVgve~r----G~~lA~~LA~~Lgvp~v 153 (260)
.++..+..+. ++.++..++|+|++-.+. |-.++..+|..||+|++
T Consensus 95 ~~~~~~a~~L---a~~i~~~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~v 143 (264)
T 1o97_C 95 SDAIVVGRIL---TEVIKKEAPDMVFAGVQSSDQAYASTGISVASYLNWPHA 143 (264)
T ss_dssp CCHHHHHHHH---HHHHHHHCCSEEEEESCCTTTCCCCHHHHHHHHHTCCEE
T ss_pred CCHHHHHHHH---HHHHHhcCCCEEEEcCCccCCchhhHHHHHHHHhCCCcc
Confidence 3555544444 333433368988886533 46799999999999985
No 109
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=23.63 E-value=1.1e+02 Score=22.25 Aligned_cols=30 Identities=17% Similarity=0.296 Sum_probs=25.3
Q ss_pred ccCCCCeEEEEeeeccchHHHHHHHHHHHhCCC
Q 024917 185 AVQAGERALIVDDLVATGGTLSAAIRLLGSFQN 217 (260)
Q Consensus 185 ~i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga 217 (260)
.+.+++.|++++ .+|.....+...|++.|.
T Consensus 51 ~l~~~~~ivvyC---~~G~rs~~aa~~L~~~G~ 80 (108)
T 3gk5_A 51 ILERDKKYAVIC---AHGNRSAAAVEFLSQLGL 80 (108)
T ss_dssp GSCTTSCEEEEC---SSSHHHHHHHHHHHTTTC
T ss_pred hCCCCCeEEEEc---CCCcHHHHHHHHHHHcCC
Confidence 345778899998 688888889999999998
No 110
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=23.22 E-value=1.1e+02 Score=21.68 Aligned_cols=28 Identities=18% Similarity=0.084 Sum_probs=16.7
Q ss_pred CCeEEEEeeeccchHHHHHHHHHHHhCCCcE
Q 024917 189 GERALIVDDLVATGGTLSAAIRLLGSFQNHI 219 (260)
Q Consensus 189 GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~v 219 (260)
+++||||||=-..... ....|++.|.++
T Consensus 3 ~~~ilivdd~~~~~~~---l~~~L~~~g~~v 30 (136)
T 1mvo_A 3 NKKILVVDDEESIVTL---LQYNLERSGYDV 30 (136)
T ss_dssp CCEEEEECSCHHHHHH---HHHHHHHTTCEE
T ss_pred CCEEEEEECCHHHHHH---HHHHHHHCCcEE
Confidence 4678888886544433 344555666653
No 111
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=23.19 E-value=93 Score=27.04 Aligned_cols=45 Identities=9% Similarity=-0.095 Sum_probs=30.3
Q ss_pred cCHHHHHHHHHHHHHHHhcCCccEEEeecCc----hhhhHHHHHHHhCCCEE
Q 024917 106 LDTKAFRDTIDLFVERYKDKNISVVAGIEAR----GFIFGPPIALAIGAKFV 153 (260)
Q Consensus 106 ~dp~~~~~l~~~La~~i~~~~iDvVVgve~r----G~~lA~~LA~~Lgvp~v 153 (260)
.++..+..+...+ +++.++|+|++..+. |--++..+|..||.|++
T Consensus 99 ~~~~~~A~~La~~---i~~~~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~v 147 (255)
T 1efv_B 99 LGPLQVARVLAKL---AEKEKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQG 147 (255)
T ss_dssp CCHHHHHHHHHHH---HHHHTCSEEEEESCCTTTCCCCHHHHHHHHHTCCEE
T ss_pred CCHHHHHHHHHHH---HHhcCCCEEEEeCcccCCchhhHHHHHHHHhCCCcc
Confidence 4555544444333 333468888886533 46899999999999985
No 112
>3fet_A Electron transfer flavoprotein subunit alpha RELA protein; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: MSE; 2.05A {Thermoplasma acidophilum}
Probab=23.18 E-value=1.4e+02 Score=24.10 Aligned_cols=40 Identities=10% Similarity=-0.051 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHhcCCccEEEee-cCchhhhHHHHHHHhCCCEE
Q 024917 112 RDTIDLFVERYKDKNISVVAGI-EARGFIFGPPIALAIGAKFV 153 (260)
Q Consensus 112 ~~l~~~La~~i~~~~iDvVVgv-e~rG~~lA~~LA~~Lgvp~v 153 (260)
+..++.+++.++ ++|+|+.. ...|--++..+|.+|+.|++
T Consensus 57 e~~a~~l~~~~~--~p~~Vl~g~t~~g~~vaprlAa~L~~~~~ 97 (166)
T 3fet_A 57 DAVSEGILKIAG--NYDYIAIGSTEVGREIAGYLSFKTGFYTA 97 (166)
T ss_dssp HHHHHHHHHHHT--TCSEEEEECSHHHHHHHHHHHHHHCCCEE
T ss_pred HHHHHHHHHHHc--CCCEEEEcCCCccccHHHHHHHHhCCCce
Confidence 355666666665 78877765 45777999999999999985
No 113
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=23.11 E-value=1.3e+02 Score=26.05 Aligned_cols=39 Identities=10% Similarity=-0.026 Sum_probs=26.4
Q ss_pred HHHHHHHHhcCCccEEEeecCchhhhHHHHHHHhCCCEEEE
Q 024917 115 IDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPM 155 (260)
Q Consensus 115 ~~~La~~i~~~~iDvVVgve~rG~~lA~~LA~~Lgvp~v~i 155 (260)
...+.+.+++.++|+|++-. ....+...|+.+|+|++..
T Consensus 103 ~~~l~~~l~~~~PD~Vv~~~--~~~~~~~aa~~~giP~v~~ 141 (391)
T 3tsa_A 103 LPEYLRLAEAWRPSVLLVDV--CALIGRVLGGLLDLPVVLH 141 (391)
T ss_dssp HHHHHHHHHHHCCSEEEEET--TCHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHhcCCCEEEeCc--chhHHHHHHHHhCCCEEEE
Confidence 34445555666899998853 2234566788999998765
No 114
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=22.87 E-value=81 Score=22.71 Aligned_cols=30 Identities=3% Similarity=-0.040 Sum_probs=19.6
Q ss_pred CCCeEEEEeeeccchHHHHHHHHHHHhCC-CcEE
Q 024917 188 AGERALIVDDLVATGGTLSAAIRLLGSFQ-NHIF 220 (260)
Q Consensus 188 ~GkrVLIVDDVltTG~Tl~aa~~LL~~~G-a~vV 220 (260)
...+||||||=-.... ...+.|++.| .++.
T Consensus 13 ~~~~ilivdd~~~~~~---~l~~~L~~~g~~~v~ 43 (135)
T 3snk_A 13 KRKQVALFSSDPNFKR---DVATRLDALAIYDVR 43 (135)
T ss_dssp CCEEEEEECSCHHHHH---HHHHHHHHTSSEEEE
T ss_pred CCcEEEEEcCCHHHHH---HHHHHHhhcCCeEEE
Confidence 4468999999654444 4556667777 5444
No 115
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=22.76 E-value=92 Score=21.76 Aligned_cols=32 Identities=16% Similarity=0.251 Sum_probs=29.9
Q ss_pred cCCCCeEEEEeeeccchHHHHHHHHHHHhCCC
Q 024917 186 VQAGERALIVDDLVATGGTLSAAIRLLGSFQN 217 (260)
Q Consensus 186 i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga 217 (260)
+..|++|+=|++.-.+|.|...+.+++++.+.
T Consensus 47 L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 78 (93)
T 3o46_A 47 IHVGDELREVNGIPVEDKRPEEIIQILAQSQG 78 (93)
T ss_dssp CCTTCEEEEETTEESTTSCHHHHHHHHHHCCE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 78999999999999999999999999999875
No 116
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=22.54 E-value=1.2e+02 Score=22.33 Aligned_cols=30 Identities=20% Similarity=0.228 Sum_probs=18.5
Q ss_pred CCCeEEEEeeeccchHHHHHHHHHHHhCCCcEE
Q 024917 188 AGERALIVDDLVATGGTLSAAIRLLGSFQNHIF 220 (260)
Q Consensus 188 ~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV 220 (260)
++.+||||||=-.... ...+.|++.|.++.
T Consensus 6 ~~~~iLivdd~~~~~~---~l~~~L~~~g~~v~ 35 (154)
T 2rjn_A 6 KNYTVMLVDDEQPILN---SLKRLIKRLGCNII 35 (154)
T ss_dssp SCCEEEEECSCHHHHH---HHHHHHHTTTCEEE
T ss_pred CCCeEEEEcCCHHHHH---HHHHHHHHcCCeEE
Confidence 4668999988654433 34455566676544
No 117
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=22.47 E-value=1.2e+02 Score=20.90 Aligned_cols=28 Identities=18% Similarity=0.152 Sum_probs=16.3
Q ss_pred CeEEEEeeeccchHHHHHHHHHHHhCCCcEE
Q 024917 190 ERALIVDDLVATGGTLSAAIRLLGSFQNHIF 220 (260)
Q Consensus 190 krVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV 220 (260)
.+||||||=-.....+ ...|++.|.++.
T Consensus 2 ~~ilivdd~~~~~~~l---~~~l~~~~~~v~ 29 (120)
T 2a9o_A 2 KKILIVDDEKPISDII---KFNMTKEGYEVV 29 (120)
T ss_dssp CEEEEECSCHHHHHHH---HHHHHHTTCEEE
T ss_pred ceEEEEcCCHHHHHHH---HHHHHhcCcEEE
Confidence 3688888865444333 345556666543
No 118
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=22.46 E-value=1.1e+02 Score=22.68 Aligned_cols=31 Identities=19% Similarity=0.244 Sum_probs=19.9
Q ss_pred CCCCeEEEEeeeccchHHHHHHHHHHHhCCCcEE
Q 024917 187 QAGERALIVDDLVATGGTLSAAIRLLGSFQNHIF 220 (260)
Q Consensus 187 ~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV 220 (260)
.+..+||||||=-.. .....+.|++.|.++.
T Consensus 12 ~~~~~ILivdd~~~~---~~~l~~~L~~~g~~v~ 42 (153)
T 3hv2_A 12 TRRPEILLVDSQEVI---LQRLQQLLSPLPYTLH 42 (153)
T ss_dssp CSCCEEEEECSCHHH---HHHHHHHHTTSSCEEE
T ss_pred cCCceEEEECCCHHH---HHHHHHHhcccCcEEE
Confidence 356789999986543 3445566667776544
No 119
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=22.27 E-value=1.3e+02 Score=21.58 Aligned_cols=29 Identities=28% Similarity=0.209 Sum_probs=16.3
Q ss_pred CCCeEEEEeeeccchHHHHHHHHHHHhCCCcE
Q 024917 188 AGERALIVDDLVATGGTLSAAIRLLGSFQNHI 219 (260)
Q Consensus 188 ~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~v 219 (260)
+..+||||||=-.... ...+.|++.|.++
T Consensus 6 ~~~~iLivdd~~~~~~---~l~~~L~~~g~~v 34 (142)
T 3cg4_A 6 HKGDVMIVDDDAHVRI---AVKTILSDAGFHI 34 (142)
T ss_dssp CCCEEEEECSCHHHHH---HHHHHHHHTTCEE
T ss_pred CCCeEEEEcCCHHHHH---HHHHHHHHCCeEE
Confidence 4567888887644333 3344455556543
No 120
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=22.26 E-value=3.1e+02 Score=24.65 Aligned_cols=75 Identities=15% Similarity=0.121 Sum_probs=43.7
Q ss_pred CchhhhHHHHHHHhCCCEEEEecCCCCCCceeeeeeeecccceeEEEEecccCCCCeEEEEeeeccc-hHH---HHHHHH
Q 024917 135 ARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVAT-GGT---LSAAIR 210 (260)
Q Consensus 135 ~rG~~lA~~LA~~Lgvp~v~iRK~~kl~~~~~s~~y~~e~g~~~lel~~~~i~~GkrVLIVDDVltT-G~T---l~aa~~ 210 (260)
...-.+|..+|+.||+|+..+... ++..|+-.+++ ..-.+|+.|.||-..... -.. +.-+++
T Consensus 10 ~~~~~La~~ia~~lg~~l~~~~~~------------~F~dGE~~v~i--~esvrg~dV~iiqs~~~p~nd~lmeLl~~id 75 (326)
T 3s5j_B 10 SSHQDLSQKIADRLGLELGKVVTK------------KFSNQETCVEI--GESVRGEDVYIVQSGCGEINDNLMELLIMIN 75 (326)
T ss_dssp SSCCHHHHHHHHHTTCCCCCEEEE------------ECTTSCEEEEE--CSCCTTCEEEEECCCCSCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhCCceeeeEEe------------ECCCCCEEEEE--CCCcCCCcEEEEecCCCCccHHHHHHHHHHH
Confidence 334479999999999987432211 11224333333 233479999998754321 112 223556
Q ss_pred HHHhCCCcEEEEE
Q 024917 211 LLGSFQNHIFILI 223 (260)
Q Consensus 211 LL~~~Ga~vV~~a 223 (260)
.++++||+.+.+.
T Consensus 76 A~k~asA~rIt~V 88 (326)
T 3s5j_B 76 ACKIASASRVTAV 88 (326)
T ss_dssp HHHHTTCSEEEEE
T ss_pred HHHhcCCcEEEEe
Confidence 7788999887653
No 121
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=22.22 E-value=1.1e+02 Score=21.47 Aligned_cols=26 Identities=23% Similarity=0.256 Sum_probs=15.9
Q ss_pred CCeEEEEeeeccchHHHHHHHHHHHhCCC
Q 024917 189 GERALIVDDLVATGGTLSAAIRLLGSFQN 217 (260)
Q Consensus 189 GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga 217 (260)
.-+||||||=-.....+ .++|++.|.
T Consensus 4 ~~~ilivdd~~~~~~~l---~~~l~~~~~ 29 (128)
T 1jbe_A 4 ELKFLVVDDFSTMRRIV---RNLLKELGF 29 (128)
T ss_dssp TCCEEEECSCHHHHHHH---HHHHHHTTC
T ss_pred ccEEEEECCCHHHHHHH---HHHHHHcCC
Confidence 45799999865544444 444555665
No 122
>2r44_A Uncharacterized protein; putative ATPase, structural genomics, joint center for struc genomics, JCSG; HET: MSE PG4; 2.00A {Cytophaga hutchinsonii atcc 33406}
Probab=22.12 E-value=3.7e+02 Score=22.88 Aligned_cols=104 Identities=13% Similarity=0.146 Sum_probs=56.5
Q ss_pred ccCHHHHHHHHHHHHHHHhcCCccEEEeecCchh-hhHHHHHHHhCCCEEEEecC-CCCCCceeeeeeeecccceeEEEE
Q 024917 105 LLDTKAFRDTIDLFVERYKDKNISVVAGIEARGF-IFGPPIALAIGAKFVPMRKP-KKLPGEVISEEYSLEYGKDVMEMH 182 (260)
Q Consensus 105 l~dp~~~~~l~~~La~~i~~~~iDvVVgve~rG~-~lA~~LA~~Lgvp~v~iRK~-~kl~~~~~s~~y~~e~g~~~lel~ 182 (260)
.+..+..+.+...+.. . +.=++.|++--|= .+|..+|..++.++..+.-. ...+...... .......+.+...
T Consensus 30 ~g~~~~~~~l~~~l~~---~-~~vll~G~pGtGKT~la~~la~~~~~~~~~i~~~~~~~~~~l~g~-~~~~~~~~~~~~~ 104 (331)
T 2r44_A 30 VGQKYMINRLLIGICT---G-GHILLEGVPGLAKTLSVNTLAKTMDLDFHRIQFTPDLLPSDLIGT-MIYNQHKGNFEVK 104 (331)
T ss_dssp CSCHHHHHHHHHHHHH---T-CCEEEESCCCHHHHHHHHHHHHHTTCCEEEEECCTTCCHHHHHEE-EEEETTTTEEEEE
T ss_pred eCcHHHHHHHHHHHHc---C-CeEEEECCCCCcHHHHHHHHHHHhCCCeEEEecCCCCChhhcCCc-eeecCCCCceEec
Confidence 3455566555544432 2 3347777776666 78999999999998655421 1111111111 1111122223333
Q ss_pred ecccCCCCeEEEEeeeccc-hHHHHHHHHHHHhC
Q 024917 183 VGAVQAGERALIVDDLVAT-GGTLSAAIRLLGSF 215 (260)
Q Consensus 183 ~~~i~~GkrVLIVDDVltT-G~Tl~aa~~LL~~~ 215 (260)
.+.+. ..||++||+=.. ..+..+..+.+++.
T Consensus 105 ~g~l~--~~vl~iDEi~~~~~~~~~~Ll~~l~~~ 136 (331)
T 2r44_A 105 KGPVF--SNFILADEVNRSPAKVQSALLECMQEK 136 (331)
T ss_dssp ECTTC--SSEEEEETGGGSCHHHHHHHHHHHHHS
T ss_pred cCccc--ccEEEEEccccCCHHHHHHHHHHHhcC
Confidence 34332 369999998554 45556666777654
No 123
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=21.95 E-value=83 Score=22.03 Aligned_cols=33 Identities=18% Similarity=0.316 Sum_probs=30.5
Q ss_pred cCCCCeEEEEeeeccchHHHHHHHHHHHhCCCc
Q 024917 186 VQAGERALIVDDLVATGGTLSAAIRLLGSFQNH 218 (260)
Q Consensus 186 i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~ 218 (260)
+..|++|+=|++.-.+|.|...+.+++++.+.+
T Consensus 40 L~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~ 72 (88)
T 3e17_A 40 LHEGDIILKINGTVTENMSLTDARKLIEKSRGK 72 (88)
T ss_dssp CCTTCEEEEETTEECTTCCHHHHHHHHHHTTTE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 789999999999999999999999999998764
No 124
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=21.88 E-value=1.1e+02 Score=23.62 Aligned_cols=29 Identities=24% Similarity=0.239 Sum_probs=18.5
Q ss_pred CCCeEEEEeeeccchHHHHHHHHHHHhCCCcE
Q 024917 188 AGERALIVDDLVATGGTLSAAIRLLGSFQNHI 219 (260)
Q Consensus 188 ~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~v 219 (260)
.+.+||||||=-..... ..++|++.|.++
T Consensus 6 ~~~~iLivdd~~~~~~~---l~~~L~~~g~~v 34 (184)
T 3rqi_A 6 SDKNFLVIDDNEVFAGT---LARGLERRGYAV 34 (184)
T ss_dssp -CCEEEEECSCHHHHHH---HHHHHHHTTCEE
T ss_pred CCCeEEEEcCCHHHHHH---HHHHHHHCCCEE
Confidence 45689999996654444 445566677654
No 125
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=21.58 E-value=1.9e+02 Score=24.55 Aligned_cols=40 Identities=20% Similarity=0.015 Sum_probs=27.1
Q ss_pred HHHHHHHhcCCccEEEeecCchhhhHHHHHHHhCCCEEEE
Q 024917 116 DLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPM 155 (260)
Q Consensus 116 ~~La~~i~~~~iDvVVgve~rG~~lA~~LA~~Lgvp~v~i 155 (260)
..+.+.+++.++|+|++-.......+...++.+++|++..
T Consensus 86 ~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~ 125 (364)
T 1f0k_A 86 RQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIPVVLH 125 (364)
T ss_dssp HHHHHHHHHHCCSEEEECSSTTHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHhcCCCEEEEeCCcCchHHHHHHHHcCCCEEEE
Confidence 3444555556899999975443344667788899998754
No 126
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=21.57 E-value=1.4e+02 Score=21.50 Aligned_cols=30 Identities=7% Similarity=0.061 Sum_probs=19.7
Q ss_pred CCCeEEEEeeeccchHHHHHHHHHHHh-CCCcEE
Q 024917 188 AGERALIVDDLVATGGTLSAAIRLLGS-FQNHIF 220 (260)
Q Consensus 188 ~GkrVLIVDDVltTG~Tl~aa~~LL~~-~Ga~vV 220 (260)
...+||||||=-..-.. ..++|++ .|.+++
T Consensus 3 ~~~~ilivdd~~~~~~~---l~~~L~~~~~~~v~ 33 (140)
T 3lua_A 3 LDGTVLLIDYFEYEREK---TKIIFDNIGEYDFI 33 (140)
T ss_dssp CCCEEEEECSCHHHHHH---HHHHHHHHCCCEEE
T ss_pred CCCeEEEEeCCHHHHHH---HHHHHHhccCccEE
Confidence 35689999996654444 4455666 677655
No 127
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=21.41 E-value=1.2e+02 Score=21.87 Aligned_cols=36 Identities=17% Similarity=0.347 Sum_probs=31.3
Q ss_pred cCCCCeEEEEeeeccchHHHHHHHHHHHhCCCcEEE
Q 024917 186 VQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFI 221 (260)
Q Consensus 186 i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~ 221 (260)
+..|++|+=||+.-.++.|...+.++++..+...+.
T Consensus 63 L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~v~ 98 (108)
T 2d92_A 63 LLPGDRLVSVNEYCLDNTSLAEAVEILKAVPPGLVH 98 (108)
T ss_dssp CCTTCEEEEESSCBCTTCCHHHHHHHHHHSCSEEEE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEE
Confidence 789999999999999999999999999997655444
No 128
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=21.30 E-value=90 Score=26.30 Aligned_cols=45 Identities=9% Similarity=0.107 Sum_probs=31.0
Q ss_pred cCHHHHHHHHHHHHHHHhcCCccEEEeec-CchhhhHHHHHHHhCCCEE
Q 024917 106 LDTKAFRDTIDLFVERYKDKNISVVAGIE-ARGFIFGPPIALAIGAKFV 153 (260)
Q Consensus 106 ~dp~~~~~l~~~La~~i~~~~iDvVVgve-~rG~~lA~~LA~~Lgvp~v 153 (260)
.+++.+..+...+++. .++|+|+... ..|--++..+|.+|+.|++
T Consensus 74 ~~~~~~a~~l~~~i~~---~~p~~Vl~g~t~~G~~laprlAa~L~~~~~ 119 (217)
T 3ih5_A 74 YTSLPHTSILVNLFKE---EQPQICLMGATVIGRDLGPRVSSALTSGLT 119 (217)
T ss_dssp CCHHHHHHHHHHHHHH---HCCSEEEEECSHHHHHHHHHHHHHTTCCCB
T ss_pred CCHHHHHHHHHHHHHh---cCCCEEEEeCCcchhhHHHHHHHHhCCCcc
Confidence 3566555544444444 4678777664 5778999999999999874
No 129
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=21.26 E-value=90 Score=27.01 Aligned_cols=45 Identities=9% Similarity=0.068 Sum_probs=31.0
Q ss_pred cCHHHHHHHHHHHHHHHhcCCccEEEeecCc----hhhhHHHHHHHhCCCEE
Q 024917 106 LDTKAFRDTIDLFVERYKDKNISVVAGIEAR----GFIFGPPIALAIGAKFV 153 (260)
Q Consensus 106 ~dp~~~~~l~~~La~~i~~~~iDvVVgve~r----G~~lA~~LA~~Lgvp~v 153 (260)
.++..+..+...+++. .++|+|++..+. |--++..+|..||+|.+
T Consensus 96 ~~~~~~a~~La~~i~~---~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~v 144 (252)
T 1efp_B 96 IEPLAVAKILAAVARA---EGTELIIAGKQAIDNDMNATGQMLAAILGWAQA 144 (252)
T ss_dssp CCHHHHHHHHHHHHHH---HTCSEEEEESCCTTTCCCCHHHHHHHHHTCEEE
T ss_pred CCHHHHHHHHHHHHHh---cCCCEEEEcCCccCCchhhHHHHHHHHhCCCcc
Confidence 4566655544444433 368888886543 46899999999999985
No 130
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=21.23 E-value=1.1e+02 Score=21.77 Aligned_cols=27 Identities=30% Similarity=0.226 Sum_probs=17.3
Q ss_pred eEEEEeeeccchHHHHHHHHHHHhCCCcEE
Q 024917 191 RALIVDDLVATGGTLSAAIRLLGSFQNHIF 220 (260)
Q Consensus 191 rVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV 220 (260)
+||||||=-..-. ...+.|++.|..++
T Consensus 3 ~ilivdd~~~~~~---~l~~~L~~~g~~v~ 29 (134)
T 3f6c_A 3 NAIIIDDHPLAIA---AIRNLLIKNDIEIL 29 (134)
T ss_dssp EEEEECCCHHHHH---HHHHHHHHTTEEEE
T ss_pred EEEEEcCCHHHHH---HHHHHHhhCCcEEE
Confidence 6899998655443 44555667775554
No 131
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=21.23 E-value=85 Score=27.57 Aligned_cols=39 Identities=21% Similarity=0.058 Sum_probs=26.0
Q ss_pred HHHHHHHHhcCCccEEEeecCchhhhHHHHHHHhCCCEEEE
Q 024917 115 IDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPM 155 (260)
Q Consensus 115 ~~~La~~i~~~~iDvVVgve~rG~~lA~~LA~~Lgvp~v~i 155 (260)
...+.+.+++.++|+|++- . ...-|..+|+.+|+|++..
T Consensus 119 ~~~l~~~l~~~~pDlVv~d-~-~~~~~~~aA~~~giP~v~~ 157 (398)
T 3oti_A 119 VDGTMALVDDYRPDLVVYE-Q-GATVGLLAADRAGVPAVQR 157 (398)
T ss_dssp HHHHHHHHHHHCCSEEEEE-T-TCHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHcCCCEEEEC-c-hhhHHHHHHHHcCCCEEEE
Confidence 3444555566689999873 2 2233677889999998754
No 132
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=21.15 E-value=68 Score=23.13 Aligned_cols=33 Identities=9% Similarity=0.049 Sum_probs=25.6
Q ss_pred cCCCCeEEEEeeeccchHHHHHHHHHHHhCCCcEEE
Q 024917 186 VQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFI 221 (260)
Q Consensus 186 i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~ 221 (260)
+.+++.|+++++ +|.....+...|++.|.+.|.
T Consensus 55 l~~~~~ivvyc~---~g~rs~~a~~~L~~~G~~~v~ 87 (108)
T 1gmx_A 55 NDFDTPVMVMCY---HGNSSKGAAQYLLQQGYDVVY 87 (108)
T ss_dssp SCTTSCEEEECS---SSSHHHHHHHHHHHHTCSSEE
T ss_pred cCCCCCEEEEcC---CCchHHHHHHHHHHcCCceEE
Confidence 457788999975 677788888899999986443
No 133
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=21.11 E-value=1.4e+02 Score=20.90 Aligned_cols=27 Identities=22% Similarity=0.148 Sum_probs=15.3
Q ss_pred CeEEEEeeeccchHHHHHHHHHHHhCCCcE
Q 024917 190 ERALIVDDLVATGGTLSAAIRLLGSFQNHI 219 (260)
Q Consensus 190 krVLIVDDVltTG~Tl~aa~~LL~~~Ga~v 219 (260)
.+||||||=-..... ..+.|++.|.++
T Consensus 4 ~~ilivdd~~~~~~~---l~~~l~~~~~~v 30 (124)
T 1srr_A 4 EKILIVDDQSGIRIL---LNEVFNKEGYQT 30 (124)
T ss_dssp CEEEEECSCHHHHHH---HHHHHHTTTCEE
T ss_pred ceEEEEeCCHHHHHH---HHHHHHHCCcEE
Confidence 478888885544333 334455566544
No 134
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=20.91 E-value=91 Score=21.70 Aligned_cols=36 Identities=3% Similarity=0.079 Sum_probs=31.4
Q ss_pred cCCCCeEEEEeeeccchHHHHHHHHHHHhCCCcEEE
Q 024917 186 VQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFI 221 (260)
Q Consensus 186 i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~ 221 (260)
+..|+.|+=||+.-.++.+...+.+++++.|.+++-
T Consensus 47 l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~ 82 (95)
T 3r68_A 47 LKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQTTL 82 (95)
T ss_dssp CCTTEEEEEETTEECTTCCHHHHHHHHHTTTTEEEE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEE
Confidence 789999999999999998989999999997776544
No 135
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=20.85 E-value=1.2e+02 Score=22.14 Aligned_cols=33 Identities=18% Similarity=0.091 Sum_probs=26.3
Q ss_pred ccCCCCeEEEEeeeccchHHHHHHHHHHHhCCCcEE
Q 024917 185 AVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIF 220 (260)
Q Consensus 185 ~i~~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV 220 (260)
.+.+++.|+++- .+|.....+++.|++.|-+++
T Consensus 52 ~l~~~~~ivv~C---~~G~rS~~aa~~L~~~G~~~~ 84 (103)
T 3iwh_A 52 SFNKNEIYYIVC---AGGVRSAKVVEYLEANGIDAV 84 (103)
T ss_dssp GCCTTSEEEEEC---SSSSHHHHHHHHHHTTTCEEE
T ss_pred hhcCCCeEEEEC---CCCHHHHHHHHHHHHcCCCEE
Confidence 456788888875 578888888999999998765
No 136
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=20.80 E-value=1.2e+02 Score=21.86 Aligned_cols=28 Identities=25% Similarity=0.295 Sum_probs=16.0
Q ss_pred CeEEEEeeeccchHHHHHHHHHHHhCCCcEE
Q 024917 190 ERALIVDDLVATGGTLSAAIRLLGSFQNHIF 220 (260)
Q Consensus 190 krVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV 220 (260)
.+||||||=-. ......+.|++.|..+.
T Consensus 4 ~~ilivdd~~~---~~~~l~~~l~~~g~~v~ 31 (143)
T 3jte_A 4 AKILVIDDEST---ILQNIKFLLEIDGNEVL 31 (143)
T ss_dssp CEEEEECSCHH---HHHHHHHHHHHTTCEEE
T ss_pred CEEEEEcCCHH---HHHHHHHHHHhCCceEE
Confidence 47888887543 33344455566665443
No 137
>3n0r_A Response regulator; sigma factor, receiver, two-component SI transduction, signaling protein; HET: MSE GOL; 1.25A {Caulobacter vibrioides} PDB: 3t0y_A
Probab=20.77 E-value=1.2e+02 Score=26.13 Aligned_cols=31 Identities=13% Similarity=0.145 Sum_probs=21.5
Q ss_pred CCCeEEEEeeeccchHHHHHHHHHHHhCCCcEEE
Q 024917 188 AGERALIVDDLVATGGTLSAAIRLLGSFQNHIFI 221 (260)
Q Consensus 188 ~GkrVLIVDDVltTG~Tl~aa~~LL~~~Ga~vV~ 221 (260)
.+.+||||||=-.. ...+.++|++.|.++++
T Consensus 159 l~~rILvVdD~~~~---~~~l~~~L~~~g~~v~~ 189 (286)
T 3n0r_A 159 LATEVLIIEDEPVI---AADIEALVRELGHDVTD 189 (286)
T ss_dssp CCCEEEEECCSHHH---HHHHHHHHHHTTCEEEE
T ss_pred CCCcEEEEcCCHHH---HHHHHHHhhccCceEEE
Confidence 35689999995443 33455677788888873
No 138
>3td9_A Branched chain amino acid ABC transporter, peripl amino acid-binding protein; leucine binding, structural genomics; HET: MSE PHE; 1.90A {Thermotoga maritima}
Probab=20.66 E-value=2.6e+02 Score=23.79 Aligned_cols=111 Identities=10% Similarity=0.083 Sum_probs=58.4
Q ss_pred cCHHHHHHHHHHHHHHHhcCCccEEEeecCchh-hhHHHHHHHhCCCEEEEec-CCCCC--Cc-eeeeeeeecccceeEE
Q 024917 106 LDTKAFRDTIDLFVERYKDKNISVVAGIEARGF-IFGPPIALAIGAKFVPMRK-PKKLP--GE-VISEEYSLEYGKDVME 180 (260)
Q Consensus 106 ~dp~~~~~l~~~La~~i~~~~iDvVVgve~rG~-~lA~~LA~~Lgvp~v~iRK-~~kl~--~~-~~s~~y~~e~g~~~le 180 (260)
.+|+.....++.+.. +.+++.|+|+...+. .-+..++...++|++..-. ...+. .+ ++............+
T Consensus 64 ~~~~~~~~~~~~l~~---~~~v~~iiG~~~s~~~~~~~~~~~~~~iP~i~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~- 139 (366)
T 3td9_A 64 SEKTEAANAAARAID---KEKVLAIIGEVASAHSLAIAPIAEENKVPMVTPASTNPLVTQGRKFVSRVCFIDPFQGAAM- 139 (366)
T ss_dssp TCHHHHHHHHHHHHH---TSCCSEEEECSSHHHHHHHHHHHHHTTCCEEESSCCCGGGTTTCSSEEESSCCHHHHHHHH-
T ss_pred CCHHHHHHHHHHHhc---cCCeEEEEccCCchhHHHHHHHHHhCCCeEEecCCCCccccCCCCCEEEEeCCcHHHHHHH-
Confidence 577665555544433 336999999866554 3345677788999876422 11111 11 111000000000000
Q ss_pred EEeccc---CCCCeEEEE---eeeccchHHHHHHHHHHHhCCCcEEEEE
Q 024917 181 MHVGAV---QAGERALIV---DDLVATGGTLSAAIRLLGSFQNHIFILI 223 (260)
Q Consensus 181 l~~~~i---~~GkrVLIV---DDVltTG~Tl~aa~~LL~~~Ga~vV~~a 223 (260)
. ..+ ...++|.+| ||-...+ ......+.+++.|.+++...
T Consensus 140 -~-~~l~~~~g~~~iaii~~~~~~~~~~-~~~~~~~~~~~~G~~v~~~~ 185 (366)
T 3td9_A 140 -A-VFAYKNLGAKRVVVFTDVEQDYSVG-LSNFFINKFTELGGQVKRVF 185 (366)
T ss_dssp -H-HHHHHTSCCCEEEEEEETTCHHHHH-HHHHHHHHHHHTTCEEEEEE
T ss_pred -H-HHHHHhcCCcEEEEEEeCCCcHHHH-HHHHHHHHHHHCCCEEEEEE
Confidence 0 111 145889888 4433322 35667888999999887765
No 139
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=20.07 E-value=1.4e+02 Score=20.43 Aligned_cols=26 Identities=31% Similarity=0.235 Sum_probs=14.5
Q ss_pred eEEEEeeeccchHHHHHHHHHHHhCCCcE
Q 024917 191 RALIVDDLVATGGTLSAAIRLLGSFQNHI 219 (260)
Q Consensus 191 rVLIVDDVltTG~Tl~aa~~LL~~~Ga~v 219 (260)
+||||||=-.....+. +.|++.|.++
T Consensus 3 ~ilivdd~~~~~~~l~---~~l~~~~~~v 28 (116)
T 3a10_A 3 RILVVDDEPNIRELLK---EELQEEGYEI 28 (116)
T ss_dssp EEEEECSCHHHHHHHH---HHHHHTTCEE
T ss_pred EEEEEeCCHHHHHHHH---HHHHHCCCEE
Confidence 6788887655444443 3444455543
Done!