BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024923
(260 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2NYL|C Chain C, Crystal Structure Of Protein Phosphatase 2a (Pp2a)
Holoenzyme With The Catalytic Subunit Carboxyl Terminus
Truncated
pdb|2NYL|F Chain F, Crystal Structure Of Protein Phosphatase 2a (Pp2a)
Holoenzyme With The Catalytic Subunit Carboxyl Terminus
Truncated
pdb|2NYM|C Chain C, Crystal Structure Of Protein Phosphatase 2a (Pp2a) With
C-Terminus Truncated Catalytic Subunit
pdb|2NYM|F Chain F, Crystal Structure Of Protein Phosphatase 2a (Pp2a) With
C-Terminus Truncated Catalytic Subunit
Length = 293
Score = 387 bits (993), Expect = e-108, Method: Compositional matrix adjust.
Identities = 183/223 (82%), Positives = 199/223 (89%), Gaps = 2/223 (0%)
Query: 14 LDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELF 73
LD+ I QL +CK LSE +V+ LCEKAKEIL ESNVQ V+ PVT+CGD+HGQFHDL ELF
Sbjct: 9 LDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELF 68
Query: 74 RIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGF 133
RIGGK PDTNYLFMGDYVDRGYYSVETVTLLV+LKVRY +RITILRGNHESRQITQVYGF
Sbjct: 69 RIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGF 128
Query: 134 YDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEV 193
YDECLRKYGNANVWK FTDLFDY PLTALV+ +IFCLHGGLSPSI+TLD+IR DR+QEV
Sbjct: 129 YDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEV 188
Query: 194 PHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQVNTIALSFRH 236
PHEGPMCDLLWSDPDDR GWGISPRGAGYTFGQ I+ +F H
Sbjct: 189 PHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQ--DISETFNH 229
>pdb|3P71|C Chain C, Crystal Structure Of The Complex Of Lcmt-1 And Pp2a
Length = 304
Score = 387 bits (993), Expect = e-108, Method: Compositional matrix adjust.
Identities = 183/223 (82%), Positives = 199/223 (89%), Gaps = 2/223 (0%)
Query: 14 LDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELF 73
LD+ I QL +CK LSE +V+ LCEKAKEIL ESNVQ V+ PVT+CGD+HGQFHDL ELF
Sbjct: 10 LDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELF 69
Query: 74 RIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGF 133
RIGGK PDTNYLFMGDYVDRGYYSVETVTLLV+LKVRY +RITILRGNHESRQITQVYGF
Sbjct: 70 RIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGF 129
Query: 134 YDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEV 193
YDECLRKYGNANVWK FTDLFDY PLTALV+ +IFCLHGGLSPSI+TLD+IR DR+QEV
Sbjct: 130 YDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEV 189
Query: 194 PHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQVNTIALSFRH 236
PHEGPMCDLLWSDPDDR GWGISPRGAGYTFGQ I+ +F H
Sbjct: 190 PHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQ--DISETFNH 230
>pdb|2IE3|C Chain C, Structure Of The Protein Phosphatase 2a Core Enzyme Bound
To Tumor- Inducing Toxins
Length = 309
Score = 386 bits (992), Expect = e-108, Method: Compositional matrix adjust.
Identities = 183/223 (82%), Positives = 199/223 (89%), Gaps = 2/223 (0%)
Query: 14 LDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELF 73
LD+ I QL +CK LSE +V+ LCEKAKEIL ESNVQ V+ PVT+CGD+HGQFHDL ELF
Sbjct: 10 LDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELF 69
Query: 74 RIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGF 133
RIGGK PDTNYLFMGDYVDRGYYSVETVTLLV+LKVRY +RITILRGNHESRQITQVYGF
Sbjct: 70 RIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGF 129
Query: 134 YDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEV 193
YDECLRKYGNANVWK FTDLFDY PLTALV+ +IFCLHGGLSPSI+TLD+IR DR+QEV
Sbjct: 130 YDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEV 189
Query: 194 PHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQVNTIALSFRH 236
PHEGPMCDLLWSDPDDR GWGISPRGAGYTFGQ I+ +F H
Sbjct: 190 PHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQ--DISETFNH 230
>pdb|2IE4|C Chain C, Structure Of The Protein Phosphatase 2a Core Enzyme Bound
To Okadaic Acid
pdb|2NPP|C Chain C, Structure Of The Protein Phosphatase 2a Holoenzyme
pdb|2NPP|F Chain F, Structure Of The Protein Phosphatase 2a Holoenzyme
pdb|3DW8|C Chain C, Structure Of A Protein Phosphatase 2a Holoenzyme With B55
Subunit
pdb|3DW8|F Chain F, Structure Of A Protein Phosphatase 2a Holoenzyme With B55
Subunit
pdb|3K7V|C Chain C, Protein Phosphatase 2a Core Complex Bound To
Dinophysistoxin-1
pdb|3K7W|C Chain C, Protein Phosphatase 2a Core Complex Bound To
Dinophysistoxin-2
Length = 309
Score = 386 bits (991), Expect = e-108, Method: Compositional matrix adjust.
Identities = 183/223 (82%), Positives = 199/223 (89%), Gaps = 2/223 (0%)
Query: 14 LDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELF 73
LD+ I QL +CK LSE +V+ LCEKAKEIL ESNVQ V+ PVT+CGD+HGQFHDL ELF
Sbjct: 10 LDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELF 69
Query: 74 RIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGF 133
RIGGK PDTNYLFMGDYVDRGYYSVETVTLLV+LKVRY +RITILRGNHESRQITQVYGF
Sbjct: 70 RIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGF 129
Query: 134 YDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEV 193
YDECLRKYGNANVWK FTDLFDY PLTALV+ +IFCLHGGLSPSI+TLD+IR DR+QEV
Sbjct: 130 YDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEV 189
Query: 194 PHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQVNTIALSFRH 236
PHEGPMCDLLWSDPDDR GWGISPRGAGYTFGQ I+ +F H
Sbjct: 190 PHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQ--DISETFNH 230
>pdb|3C5W|C Chain C, Complex Between Pp2a-Specific Methylesterase Pme-1 And
Pp2a Core Enzyme
Length = 310
Score = 386 bits (991), Expect = e-108, Method: Compositional matrix adjust.
Identities = 183/223 (82%), Positives = 199/223 (89%), Gaps = 2/223 (0%)
Query: 14 LDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELF 73
LD+ I QL +CK LSE +V+ LCEKAKEIL ESNVQ V+ PVT+CGD+HGQFHDL ELF
Sbjct: 11 LDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELF 70
Query: 74 RIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGF 133
RIGGK PDTNYLFMGDYVDRGYYSVETVTLLV+LKVRY +RITILRGNHESRQITQVYGF
Sbjct: 71 RIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGF 130
Query: 134 YDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEV 193
YDECLRKYGNANVWK FTDLFDY PLTALV+ +IFCLHGGLSPSI+TLD+IR DR+QEV
Sbjct: 131 YDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEV 190
Query: 194 PHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQVNTIALSFRH 236
PHEGPMCDLLWSDPDDR GWGISPRGAGYTFGQ I+ +F H
Sbjct: 191 PHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQ--DISETFNH 231
>pdb|2IAE|C Chain C, Crystal Structure Of A Protein Phosphatase 2a (Pp2a)
Holoenzyme.
pdb|2IAE|F Chain F, Crystal Structure Of A Protein Phosphatase 2a (Pp2a)
Holoenzyme
Length = 309
Score = 384 bits (987), Expect = e-107, Method: Compositional matrix adjust.
Identities = 182/223 (81%), Positives = 199/223 (89%), Gaps = 2/223 (0%)
Query: 14 LDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELF 73
LD+ I QL +CK LSE +V+ LCEKAKEIL ESNVQ V+ PVT+CGD+HGQFHDL ELF
Sbjct: 10 LDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELF 69
Query: 74 RIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGF 133
RIGGK PDTNYLFMGDYV+RGYYSVETVTLLV+LKVRY +RITILRGNHESRQITQVYGF
Sbjct: 70 RIGGKSPDTNYLFMGDYVNRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGF 129
Query: 134 YDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEV 193
YDECLRKYGNANVWK FTDLFDY PLTALV+ +IFCLHGGLSPSI+TLD+IR DR+QEV
Sbjct: 130 YDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEV 189
Query: 194 PHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQVNTIALSFRH 236
PHEGPMCDLLWSDPDDR GWGISPRGAGYTFGQ I+ +F H
Sbjct: 190 PHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQ--DISETFNH 230
>pdb|3FGA|C Chain C, Structural Basis Of Pp2a And Sgo Interaction
Length = 309
Score = 384 bits (987), Expect = e-107, Method: Compositional matrix adjust.
Identities = 182/223 (81%), Positives = 199/223 (89%), Gaps = 2/223 (0%)
Query: 14 LDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELF 73
LD+ I QL +CK LSE +V+ LCEKAKEIL ESNVQ V+ PVT+CGD+HGQFHDL ELF
Sbjct: 10 LDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELF 69
Query: 74 RIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGF 133
RIGGK PDTNYLFMGDYV+RGYYSVETVTLLV+LKVRY +RITILRGNHESRQITQVYGF
Sbjct: 70 RIGGKSPDTNYLFMGDYVNRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGF 129
Query: 134 YDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEV 193
YDECLRKYGNANVWK FTDLFDY PLTALV+ +IFCLHGGLSPSI+TLD+IR DR+QEV
Sbjct: 130 YDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEV 189
Query: 194 PHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQVNTIALSFRH 236
PHEGPMCDLLWSDPDDR GWGISPRGAGYTFGQ I+ +F H
Sbjct: 190 PHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQ--DISETFNH 230
>pdb|3N5U|A Chain A, Crystal Structure Of An Rb C-Terminal Peptide Bound To The
Catalytic Subunit Of Pp1
pdb|3N5U|B Chain B, Crystal Structure Of An Rb C-Terminal Peptide Bound To The
Catalytic Subunit Of Pp1
Length = 300
Score = 232 bits (592), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 109/233 (46%), Positives = 157/233 (67%), Gaps = 10/233 (4%)
Query: 13 NLDEQIAQLMQCK--------PLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHG 64
NLD I +L++ + L+E E+R LC K++EI + + + +++P+ ICGDIHG
Sbjct: 8 NLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHG 67
Query: 65 QFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHES 124
Q++DL LF GG P++NYLF+GDYVDRG S+ET+ LL++ K++YP+ +LRGNHE
Sbjct: 68 QYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHEC 127
Query: 125 RQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNI 184
I ++YGFYDEC R+Y N +WK FTD F+ P+ A+V+ +IFC HGGLSP +++++ I
Sbjct: 128 ASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQI 186
Query: 185 RNFDRVQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQVNTIALSFRH 236
R R +VP +G +CDLLWSDPD D GWG + RG +TFG +H
Sbjct: 187 RRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKH 239
>pdb|1FJM|A Chain A, Protein SerineTHREONINE PHOSPHATASE-1 (Alpha Isoform, Type
1) Complexed With Microcystin-Lr Toxin
pdb|1FJM|B Chain B, Protein SerineTHREONINE PHOSPHATASE-1 (Alpha Isoform, Type
1) Complexed With Microcystin-Lr Toxin
Length = 330
Score = 232 bits (592), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 109/233 (46%), Positives = 157/233 (67%), Gaps = 10/233 (4%)
Query: 13 NLDEQIAQLMQCK--------PLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHG 64
NLD I +L++ + L+E E+R LC K++EI + + + +++P+ ICGDIHG
Sbjct: 8 NLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHG 67
Query: 65 QFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHES 124
Q++DL LF GG P++NYLF+GDYVDRG S+ET+ LL++ K++YP+ +LRGNHE
Sbjct: 68 QYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHEC 127
Query: 125 RQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNI 184
I ++YGFYDEC R+Y N +WK FTD F+ P+ A+V+ +IFC HGGLSP +++++ I
Sbjct: 128 ASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQI 186
Query: 185 RNFDRVQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQVNTIALSFRH 236
R R +VP +G +CDLLWSDPD D GWG + RG +TFG +H
Sbjct: 187 RRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKH 239
>pdb|4G9J|A Chain A, Protein SerTHR PHOSPHATASE-1 In Complex With
Cell-Permeable Peptide
pdb|4G9J|B Chain B, Protein SerTHR PHOSPHATASE-1 In Complex With
Cell-Permeable Peptide
Length = 331
Score = 232 bits (591), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 109/233 (46%), Positives = 157/233 (67%), Gaps = 10/233 (4%)
Query: 13 NLDEQIAQLMQCK--------PLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHG 64
NLD I +L++ + L+E E+R LC K++EI + + + +++P+ ICGDIHG
Sbjct: 9 NLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHG 68
Query: 65 QFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHES 124
Q++DL LF GG P++NYLF+GDYVDRG S+ET+ LL++ K++YP+ +LRGNHE
Sbjct: 69 QYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHEC 128
Query: 125 RQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNI 184
I ++YGFYDEC R+Y N +WK FTD F+ P+ A+V+ +IFC HGGLSP +++++ I
Sbjct: 129 ASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQI 187
Query: 185 RNFDRVQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQVNTIALSFRH 236
R R +VP +G +CDLLWSDPD D GWG + RG +TFG +H
Sbjct: 188 RRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKH 240
>pdb|3V4Y|A Chain A, Crystal Structure Of The First Nuclear Pp1 Holoenzyme
pdb|3V4Y|C Chain C, Crystal Structure Of The First Nuclear Pp1 Holoenzyme
pdb|3V4Y|E Chain E, Crystal Structure Of The First Nuclear Pp1 Holoenzyme
pdb|3V4Y|G Chain G, Crystal Structure Of The First Nuclear Pp1 Holoenzyme
Length = 306
Score = 232 bits (591), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 109/233 (46%), Positives = 157/233 (67%), Gaps = 10/233 (4%)
Query: 13 NLDEQIAQLMQCK--------PLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHG 64
NLD I +L++ + L+E E+R LC K++EI + + + +++P+ ICGDIHG
Sbjct: 7 NLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHG 66
Query: 65 QFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHES 124
Q++DL LF GG P++NYLF+GDYVDRG S+ET+ LL++ K++YP+ +LRGNHE
Sbjct: 67 QYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHEC 126
Query: 125 RQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNI 184
I ++YGFYDEC R+Y N +WK FTD F+ P+ A+V+ +IFC HGGLSP +++++ I
Sbjct: 127 ASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQI 185
Query: 185 RNFDRVQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQVNTIALSFRH 236
R R +VP +G +CDLLWSDPD D GWG + RG +TFG +H
Sbjct: 186 RRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKH 238
>pdb|3E7A|A Chain A, Crystal Structure Of Protein Phosphatase-1 Bound To The
Natural Toxin Nodularin-R
pdb|3E7A|B Chain B, Crystal Structure Of Protein Phosphatase-1 Bound To The
Natural Toxin Nodularin-R
pdb|3E7B|A Chain A, Crystal Structure Of Protein Phosphatase-1 Bound To The
Natural Toxin Inhibitor Tautomycin
pdb|3E7B|B Chain B, Crystal Structure Of Protein Phosphatase-1 Bound To The
Natural Toxin Inhibitor Tautomycin
Length = 299
Score = 232 bits (591), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 109/233 (46%), Positives = 157/233 (67%), Gaps = 10/233 (4%)
Query: 13 NLDEQIAQLMQCK--------PLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHG 64
NLD I +L++ + L+E E+R LC K++EI + + + +++P+ ICGDIHG
Sbjct: 7 NLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHG 66
Query: 65 QFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHES 124
Q++DL LF GG P++NYLF+GDYVDRG S+ET+ LL++ K++YP+ +LRGNHE
Sbjct: 67 QYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHEC 126
Query: 125 RQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNI 184
I ++YGFYDEC R+Y N +WK FTD F+ P+ A+V+ +IFC HGGLSP +++++ I
Sbjct: 127 ASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQI 185
Query: 185 RNFDRVQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQVNTIALSFRH 236
R R +VP +G +CDLLWSDPD D GWG + RG +TFG +H
Sbjct: 186 RRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKH 238
>pdb|3EGG|A Chain A, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1) And The Pp1 Binding And Pdz Domains Of
Spinophilin
pdb|3EGG|B Chain B, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1) And The Pp1 Binding And Pdz Domains Of
Spinophilin
pdb|3EGH|A Chain A, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1), The Pp1 Binding And Pdz Domains Of
Spinophilin And The Small Natural Molecular Toxin
Nodularin-R
pdb|3EGH|B Chain B, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1), The Pp1 Binding And Pdz Domains Of
Spinophilin And The Small Natural Molecular Toxin
Nodularin-R
pdb|3HVQ|A Chain A, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1) And The Pp1 Binding And Pdz Domains Of
Neurabin
pdb|3HVQ|B Chain B, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1) And The Pp1 Binding And Pdz Domains Of
Neurabin
Length = 329
Score = 232 bits (591), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 109/233 (46%), Positives = 157/233 (67%), Gaps = 10/233 (4%)
Query: 13 NLDEQIAQLMQCK--------PLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHG 64
NLD I +L++ + L+E E+R LC K++EI + + + +++P+ ICGDIHG
Sbjct: 7 NLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHG 66
Query: 65 QFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHES 124
Q++DL LF GG P++NYLF+GDYVDRG S+ET+ LL++ K++YP+ +LRGNHE
Sbjct: 67 QYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHEC 126
Query: 125 RQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNI 184
I ++YGFYDEC R+Y N +WK FTD F+ P+ A+V+ +IFC HGGLSP +++++ I
Sbjct: 127 ASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQI 185
Query: 185 RNFDRVQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQVNTIALSFRH 236
R R +VP +G +CDLLWSDPD D GWG + RG +TFG +H
Sbjct: 186 RRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKH 238
>pdb|2O8A|A Chain A, Rat Pp1cgamma Complexed With Mouse Inhibitor-2
pdb|2O8A|B Chain B, Rat Pp1cgamma Complexed With Mouse Inhibitor-2
pdb|2O8G|A Chain A, Rat Pp1c Gamma Complexed With Mouse Inhibitor-2
pdb|2O8G|B Chain B, Rat Pp1c Gamma Complexed With Mouse Inhibitor-2
Length = 329
Score = 232 bits (591), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 110/233 (47%), Positives = 157/233 (67%), Gaps = 10/233 (4%)
Query: 13 NLDEQIAQLMQC---KP-----LSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHG 64
N+D I +L++ KP L E E+R LC K++EI + + + +++P+ ICGDIHG
Sbjct: 14 NIDSIIQRLLEVRGSKPGKNVQLQENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHG 73
Query: 65 QFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHES 124
Q++DL LF GG P++NYLF+GDYVDRG S+ET+ LL++ K++YP+ +LRGNHE
Sbjct: 74 QYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHEC 133
Query: 125 RQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNI 184
I ++YGFYDEC R+Y N +WK FTD F+ P+ A+V+ +IFC HGGLSP +++++ I
Sbjct: 134 ASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQI 192
Query: 185 RNFDRVQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQVNTIALSFRH 236
R R +VP +G +CDLLWSDPD D GWG + RG +TFG +H
Sbjct: 193 RRIMRPTDVPDQGLLCDLLWSDPDKDVLGWGENDRGVSFTFGAEVVAKFLHKH 245
>pdb|1JK7|A Chain A, Crystal Structure Of The Tumor-Promoter Okadaic Acid Bound
To Protein Phosphatase-1
pdb|1IT6|A Chain A, Crystal Structure Of The Complex Between Calyculin A And
The Catalytic Subunit Of Protein Phosphatase 1
pdb|1IT6|B Chain B, Crystal Structure Of The Complex Between Calyculin A And
The Catalytic Subunit Of Protein Phosphatase 1
pdb|2BCD|A Chain A, X-Ray Crystal Structure Of Protein Phosphatase-1 With The
Marine Toxin Motuporin Bound
pdb|2BDX|A Chain A, X-Ray Crystal Structure Of Dihydromicrocystin-La Bound To
Protein Phosphatase-1
Length = 323
Score = 232 bits (591), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 110/233 (47%), Positives = 157/233 (67%), Gaps = 10/233 (4%)
Query: 13 NLDEQIAQLMQC---KP-----LSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHG 64
N+D I +L++ KP L E E+R LC K++EI + + + +++P+ ICGDIHG
Sbjct: 8 NIDSIIQRLLEVRGSKPGKNVQLQENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHG 67
Query: 65 QFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHES 124
Q++DL LF GG P++NYLF+GDYVDRG S+ET+ LL++ K++YP+ +LRGNHE
Sbjct: 68 QYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHEC 127
Query: 125 RQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNI 184
I ++YGFYDEC R+Y N +WK FTD F+ P+ A+V+ +IFC HGGLSP +++++ I
Sbjct: 128 ASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQI 186
Query: 185 RNFDRVQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQVNTIALSFRH 236
R R +VP +G +CDLLWSDPD D GWG + RG +TFG +H
Sbjct: 187 RRIMRPTDVPDQGLLCDLLWSDPDKDVLGWGENDRGVSFTFGAEVVAKFLHKH 239
>pdb|1U32|A Chain A, Crystal Structure Of A Protein Phosphatase-1: Calcineurin
Hybrid Bound To Okadaic Acid
Length = 293
Score = 231 bits (590), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 110/233 (47%), Positives = 157/233 (67%), Gaps = 10/233 (4%)
Query: 13 NLDEQIAQLMQC---KP-----LSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHG 64
N+D I +L++ KP L E E+R LC K++EI + + + +++P+ ICGDIHG
Sbjct: 3 NIDSIIQRLLEVRGSKPGKNVQLQENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHG 62
Query: 65 QFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHES 124
Q++DL LF GG P++NYLF+GDYVDRG S+ET+ LL++ K++YP+ +LRGNHE
Sbjct: 63 QYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHEC 122
Query: 125 RQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNI 184
I ++YGFYDEC R+Y N +WK FTD F+ P+ A+V+ +IFC HGGLSP +++++ I
Sbjct: 123 ASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQI 181
Query: 185 RNFDRVQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQVNTIALSFRH 236
R R +VP +G +CDLLWSDPD D GWG + RG +TFG +H
Sbjct: 182 RRIMRPTDVPDQGLLCDLLWSDPDKDVLGWGENDRGVSFTFGAEVVAKFLHKH 234
>pdb|1S70|A Chain A, Complex Between Protein Ser/thr Phosphatase-1 (delta) And
The Myosin Phosphatase Targeting Subunit 1 (mypt1)
Length = 330
Score = 229 bits (584), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 110/233 (47%), Positives = 156/233 (66%), Gaps = 10/233 (4%)
Query: 13 NLDEQIAQLMQ---CKP-----LSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHG 64
N+D I +L++ C+P ++E EVR LC K++EI + + + +++P+ ICGDIHG
Sbjct: 10 NVDSLITRLLEVRGCRPGKIVQMTEAEVRGLCIKSREIFLSQPILLELEAPLKICGDIHG 69
Query: 65 QFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHES 124
Q+ DL LF GG P+ NYLF+GDYVDRG S+ET+ LL++ K++YP+ +LRGNHE
Sbjct: 70 QYTDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHEC 129
Query: 125 RQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNI 184
I ++YGFYDEC R++ N +WK FTD F+ P+ A+V+ +IFC HGGLSP +++++ I
Sbjct: 130 ASINRIYGFYDECKRRF-NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQI 188
Query: 185 RNFDRVQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQVNTIALSFRH 236
R R +VP G +CDLLWSDPD D GWG + RG +TFG RH
Sbjct: 189 RRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRH 241
>pdb|1AUI|A Chain A, Human Calcineurin Heterodimer
Length = 521
Score = 199 bits (505), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 97/190 (51%), Positives = 127/190 (66%), Gaps = 3/190 (1%)
Query: 19 AQLMQCKPLSEQ-EVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGG 77
A LM+ L E +R++ E A IL E N+ + +PVT+CGDIHGQF DL +LF +GG
Sbjct: 48 AHLMKEGRLEESVALRIITEGAS-ILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGG 106
Query: 78 KCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDEC 137
+T YLF+GDYVDRGY+S+E V L +LK+ YP+ + +LRGNHE R +T+ + F EC
Sbjct: 107 SPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQEC 166
Query: 138 LRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEG 197
KY + V+ D FD PL AL+ + C+HGGLSP I TLD+IR DR +E P G
Sbjct: 167 KIKY-SERVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYG 225
Query: 198 PMCDLLWSDP 207
PMCD+LWSDP
Sbjct: 226 PMCDILWSDP 235
>pdb|1MF8|A Chain A, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 373
Score = 197 bits (500), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 97/190 (51%), Positives = 126/190 (66%), Gaps = 3/190 (1%)
Query: 19 AQLMQCKPLSEQ-EVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGG 77
A LM+ L E +R++ E A IL E N+ + +PVT+CGDIHGQF DL +LF +GG
Sbjct: 29 AHLMKEGRLEESVALRIITEGAS-ILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGG 87
Query: 78 KCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDEC 137
+T YLF+GDYVDRGY+S+E V L +LK+ YP+ + +LRGNHE R +T+ + F EC
Sbjct: 88 SPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQEC 147
Query: 138 LRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEG 197
KY V+ D FD PL AL+ + C+HGGLSP I TLD+IR DR +E P G
Sbjct: 148 KIKYSE-RVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYG 206
Query: 198 PMCDLLWSDP 207
PMCD+LWSDP
Sbjct: 207 PMCDILWSDP 216
>pdb|3LL8|A Chain A, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|C Chain C, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 357
Score = 197 bits (500), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 98/195 (50%), Positives = 128/195 (65%), Gaps = 3/195 (1%)
Query: 19 AQLMQCKPLSEQ-EVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGG 77
A LM+ L E +R++ E A IL E N+ + +PVT+CGDIHGQF DL +LF +GG
Sbjct: 35 AHLMKEGRLEESVALRIITEGAS-ILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGG 93
Query: 78 KCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDEC 137
+T YLF+GDYVDRGY+S+E V L +LK+ YP+ + +LRGNHE R +T+ + F EC
Sbjct: 94 SPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQEC 153
Query: 138 LRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEG 197
KY V+ D FD PL AL+ + C+HGGLSP I TLD+IR DR +E P G
Sbjct: 154 KIKYSE-RVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYG 212
Query: 198 PMCDLLWSDPDDRCG 212
PMCD+LWSDP + G
Sbjct: 213 PMCDILWSDPLEDFG 227
>pdb|2P6B|A Chain A, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|C Chain C, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 383
Score = 197 bits (500), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 97/190 (51%), Positives = 126/190 (66%), Gaps = 3/190 (1%)
Query: 19 AQLMQCKPLSEQ-EVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGG 77
A LM+ L E +R++ E A IL E N+ + +PVT+CGDIHGQF DL +LF +GG
Sbjct: 51 AHLMKEGRLEESVALRIITEGAS-ILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGG 109
Query: 78 KCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDEC 137
+T YLF+GDYVDRGY+S+E V L +LK+ YP+ + +LRGNHE R +T+ + F EC
Sbjct: 110 SPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQEC 169
Query: 138 LRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEG 197
KY V+ D FD PL AL+ + C+HGGLSP I TLD+IR DR +E P G
Sbjct: 170 KIKYSE-RVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYG 228
Query: 198 PMCDLLWSDP 207
PMCD+LWSDP
Sbjct: 229 PMCDILWSDP 238
>pdb|1M63|A Chain A, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|E Chain E, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 372
Score = 197 bits (500), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 98/195 (50%), Positives = 128/195 (65%), Gaps = 3/195 (1%)
Query: 19 AQLMQCKPLSEQ-EVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGG 77
A LM+ L E +R++ E A IL E N+ + +PVT+CGDIHGQF DL +LF +GG
Sbjct: 48 AHLMKEGRLEESVALRIITEGAS-ILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGG 106
Query: 78 KCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDEC 137
+T YLF+GDYVDRGY+S+E V L +LK+ YP+ + +LRGNHE R +T+ + F EC
Sbjct: 107 SPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQEC 166
Query: 138 LRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEG 197
KY V+ D FD PL AL+ + C+HGGLSP I TLD+IR DR +E P G
Sbjct: 167 KIKYSE-RVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYG 225
Query: 198 PMCDLLWSDPDDRCG 212
PMCD+LWSDP + G
Sbjct: 226 PMCDILWSDPLEDFG 240
>pdb|1TCO|A Chain A, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
Length = 375
Score = 197 bits (500), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 97/190 (51%), Positives = 127/190 (66%), Gaps = 3/190 (1%)
Query: 19 AQLMQCKPLSEQ-EVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGG 77
A LM+ L E +R++ E A IL E N+ + +PVT+CGDIHGQF DL +LF +GG
Sbjct: 31 AHLMKEGRLEETVALRIITEGAS-ILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGG 89
Query: 78 KCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDEC 137
+T YLF+GDYVDRGY+S+E V L +LK+ YP+ + +LRGNHE R +T+ + F EC
Sbjct: 90 SPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQEC 149
Query: 138 LRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEG 197
KY + V+ D FD PL AL+ + C+HGGLSP I TLD+IR DR +E P G
Sbjct: 150 KIKY-SERVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYG 208
Query: 198 PMCDLLWSDP 207
PMCD+LWSDP
Sbjct: 209 PMCDILWSDP 218
>pdb|2JOG|A Chain A, Structure Of The Calcineurin-Nfat Complex
Length = 327
Score = 197 bits (500), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 98/195 (50%), Positives = 128/195 (65%), Gaps = 3/195 (1%)
Query: 19 AQLMQCKPLSEQ-EVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGG 77
A LM+ L E +R++ E A IL E N+ + +PVT+CGDIHGQF DL +LF +GG
Sbjct: 28 AHLMKEGRLEESVALRIITEGAS-ILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGG 86
Query: 78 KCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDEC 137
+T YLF+GDYVDRGY+S+E V L +LK+ YP+ + +LRGNHE R +T+ + F EC
Sbjct: 87 SPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQEC 146
Query: 138 LRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEG 197
KY V+ D FD PL AL+ + C+HGGLSP I TLD+IR DR +E P G
Sbjct: 147 KIKYSE-RVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYG 205
Query: 198 PMCDLLWSDPDDRCG 212
PMCD+LWSDP + G
Sbjct: 206 PMCDILWSDPLEDFG 220
>pdb|1WAO|1 Chain 1, Pp5 Structure
pdb|1WAO|2 Chain 2, Pp5 Structure
pdb|1WAO|3 Chain 3, Pp5 Structure
pdb|1WAO|4 Chain 4, Pp5 Structure
Length = 477
Score = 163 bits (413), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 77/172 (44%), Positives = 110/172 (63%), Gaps = 3/172 (1%)
Query: 56 VTICGDIHGQFHDLAELFRIGGKCPDTN-YLFMGDYVDRGYYSVETVTLLVSLKVRYPQR 114
+T+CGD HGQF+DL +F + G +TN Y+F GD+VDRG +SVE + L K+ YP
Sbjct: 215 ITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDH 274
Query: 115 ITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGL 174
+LRGNHE+ + Q+YGF E KY A ++++F+++F++ PL + ++ +HGGL
Sbjct: 275 FHLLRGNHETDNMNQIYGFEGEVKAKY-TAQMYELFSEVFEWLPLAQCINGKVLIMHGGL 333
Query: 175 -SPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFG 225
S TLD+IR +R ++ P GPMCDLLWSDP + G IS RG FG
Sbjct: 334 FSEDGVTLDDIRKIERNRQPPDSGPMCDLLWSDPQPQNGRSISKRGVSCQFG 385
>pdb|1S95|A Chain A, Structure Of SerineTHREONINE PROTEIN PHOSPHATASE 5
pdb|1S95|B Chain B, Structure Of SerineTHREONINE PROTEIN PHOSPHATASE 5
Length = 333
Score = 162 bits (411), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 77/172 (44%), Positives = 110/172 (63%), Gaps = 3/172 (1%)
Query: 56 VTICGDIHGQFHDLAELFRIGGKCPDTN-YLFMGDYVDRGYYSVETVTLLVSLKVRYPQR 114
+T+CGD HGQF+DL +F + G +TN Y+F GD+VDRG +SVE + L K+ YP
Sbjct: 71 ITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDH 130
Query: 115 ITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGL 174
+LRGNHE+ + Q+YGF E KY A ++++F+++F++ PL + ++ +HGGL
Sbjct: 131 FHLLRGNHETDNMNQIYGFEGEVKAKY-TAQMYELFSEVFEWLPLAQCINGKVLIMHGGL 189
Query: 175 -SPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFG 225
S TLD+IR +R ++ P GPMCDLLWSDP + G IS RG FG
Sbjct: 190 FSEDGVTLDDIRKIERNRQPPDSGPMCDLLWSDPQPQNGRSISKRGVSCQFG 241
>pdb|3H60|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Mn2+ Atoms
pdb|3H60|B Chain B, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Mn2+ Atoms
pdb|3H61|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Originally Soaked With
Norcantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H61|D Chain D, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Originally Soaked With
Norcantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H62|C Chain C, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Complexed With Cantharidic
Acid
pdb|3H62|B Chain B, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Complexed With Cantharidic
Acid
pdb|3H63|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Originally Soaked With
Cantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H63|C Chain C, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Originally Soaked With
Cantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H64|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Complexed With Endothall
pdb|3H64|D Chain D, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Complexed With Endothall
pdb|3H66|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Zn2+ Atoms
pdb|3H66|B Chain B, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Zn2+ Atoms
pdb|3H67|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Zn2+ Atoms Complexed With Cantharidic
Acid
pdb|3H67|D Chain D, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Zn2+ Atoms Complexed With Cantharidic
Acid
pdb|3H68|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Zn2+ Atoms Originally Soaked With
Cantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H68|D Chain D, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Zn2+ Atoms Originally Soaked With
Cantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H69|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Zn2+ Atoms Complexed With Endothall
pdb|3H69|D Chain D, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Zn2+ Atoms Complexed With Endothall
Length = 315
Score = 162 bits (409), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 79/179 (44%), Positives = 112/179 (62%), Gaps = 3/179 (1%)
Query: 56 VTICGDIHGQFHDLAELFRIGGKCPDTN-YLFMGDYVDRGYYSVETVTLLVSLKVRYPQR 114
+T+CGD HGQF+DL +F + G +TN Y+F GD+VDRG +SVE + L K+ YP
Sbjct: 62 ITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDH 121
Query: 115 ITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGL 174
+LRGNHE+ + Q+YGF E KY A ++++F+++F++ PL + ++ +HGGL
Sbjct: 122 FHLLRGNHETDNMNQIYGFEGEVKAKY-TAQMYELFSEVFEWLPLAQCINGKVLIMHGGL 180
Query: 175 -SPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQVNTIAL 232
S TLD+IR +R ++ P GPMCDLLWSDP + G IS RG FG T A
Sbjct: 181 FSEDGVTLDDIRKIERNRQPPDSGPMCDLLWSDPQPQNGRSISKRGVSCQFGPDVTKAF 239
>pdb|3ICF|A Chain A, Structure Of Protein SerineTHREONINE PHOSPHATASE FROM
SACCHAROMYCES Cerevisiae With Similarity To Human
Phosphatase Pp5
pdb|3ICF|B Chain B, Structure Of Protein SerineTHREONINE PHOSPHATASE FROM
SACCHAROMYCES Cerevisiae With Similarity To Human
Phosphatase Pp5
Length = 335
Score = 147 bits (372), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 104/182 (57%), Gaps = 4/182 (2%)
Query: 46 ESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKC-PDTNYLFMGDYVDRGYYSVETVTLL 104
E+N P +++CGD HGQF+D+ LFR GK P YLF GD+VDRG +S E L
Sbjct: 57 ENNSTP-DVKISVCGDTHGQFYDVLNLFRKFGKVGPKHTYLFNGDFVDRGSWSCEVALLF 115
Query: 105 VSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVE 164
LK+ +P + RGNHES ++YGF DEC KY + ++ F F+ PL L+
Sbjct: 116 YCLKILHPNNFFLNRGNHESDNXNKIYGFEDECKYKY-SQRIFNXFAQSFESLPLATLIN 174
Query: 165 SEIFCLHGGL-SPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYT 223
++ HGGL S TL + +N DR + P +G +LLW+DP + G G S RG G+
Sbjct: 175 NDYLVXHGGLPSDPSATLSDFKNIDRFAQPPRDGAFXELLWADPQEANGXGPSQRGLGHA 234
Query: 224 FG 225
FG
Sbjct: 235 FG 236
>pdb|1G5B|A Chain A, Bacteriophage Lambda SerTHR PROTEIN PHOSPHATASE
pdb|1G5B|B Chain B, Bacteriophage Lambda SerTHR PROTEIN PHOSPHATASE
pdb|1G5B|C Chain C, Bacteriophage Lambda SerTHR PROTEIN PHOSPHATASE
Length = 221
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 15/93 (16%)
Query: 56 VTICGDIHGQFHDLA-ELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQR 114
+ + GD+HG + +L +L IG + +GD VDRG +VE + L + +P
Sbjct: 15 IWVVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVDRGAENVECLEL-----ITFPW- 68
Query: 115 ITILRGNHESRQITQVYGFYDECLRKYGNANVW 147
+RGNHE I + L + GN N W
Sbjct: 69 FRAVRGNHEQMMI--------DGLSERGNVNHW 93
>pdb|3O82|A Chain A, Structure Of Base N-Terminal Domain From Acinetobacter
Baumannii Bound To
5'-O-[n-(2,3-Dihydroxybenzoyl)sulfamoyl] Adenosine
pdb|3O82|B Chain B, Structure Of Base N-Terminal Domain From Acinetobacter
Baumannii Bound To
5'-O-[n-(2,3-Dihydroxybenzoyl)sulfamoyl] Adenosine
pdb|3O83|A Chain A, Structure Of Base N-Terminal Domain From Acinetobacter
Baumannii Bound To
2-(4-N-Dodecyl-1,2,
3-Triazol-1-Yl)-5'-O-[n-(2-Hydroxybenzoyl)
Sulfamoyl]adenosine
pdb|3O83|B Chain B, Structure Of Base N-Terminal Domain From Acinetobacter
Baumannii Bound To
2-(4-N-Dodecyl-1,2,
3-Triazol-1-Yl)-5'-O-[n-(2-Hydroxybenzoyl)
Sulfamoyl]adenosine
pdb|3O84|A Chain A, Structure Of Base N-Terminal Domain From Acinetobacter
Baumannii Bound To
6-Phenyl-1-(Pyridin-4-Ylmethyl)-1h-Pyrazolo[3,
4-B]pyridine-4- Carboxylic Acid.
pdb|3O84|B Chain B, Structure Of Base N-Terminal Domain From Acinetobacter
Baumannii Bound To
6-Phenyl-1-(Pyridin-4-Ylmethyl)-1h-Pyrazolo[3,
4-B]pyridine-4- Carboxylic Acid.
pdb|3U16|A Chain A, Structure Of Base N-Terminal Domain From Acinetobacter
Baumannii Bound To
6-(P-Benzyloxy)phenyl-1-(Pyridin-4-Ylmethyl)-1h-
Pyrazolo[3,4- B]pyridine-4-Carboxylic Acid.
pdb|3U16|B Chain B, Structure Of Base N-Terminal Domain From Acinetobacter
Baumannii Bound To
6-(P-Benzyloxy)phenyl-1-(Pyridin-4-Ylmethyl)-1h-
Pyrazolo[3,4- B]pyridine-4-Carboxylic Acid.
pdb|3U17|A Chain A, Structure Of Base N-Terminal Domain From Acinetobacter
Baumannii Bound To
6-(P-Benzoyl)phenyl-1-(Pyridin-4-Ylmethyl)-1h-
Pyrazolo[3,4- B]pyridine-4-Carboxylic Acid
pdb|3U17|B Chain B, Structure Of Base N-Terminal Domain From Acinetobacter
Baumannii Bound To
6-(P-Benzoyl)phenyl-1-(Pyridin-4-Ylmethyl)-1h-
Pyrazolo[3,4- B]pyridine-4-Carboxylic Acid
Length = 544
Score = 31.6 bits (70), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 15 DEQIAQLMQCKPLS-EQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELF 73
DEQI Q +P+S + E++++ E+ +E+ E + + P T CG H+ +++F
Sbjct: 355 DEQIFT-TQGRPISSDDEIKIVDEQYREVPEGEIGMLATRGPYTFCGYYQSPEHN-SQVF 412
Query: 74 RIGGKCPDTNYLFMGDYVDR 93
+ NY + GD V R
Sbjct: 413 D------EDNYYYSGDLVQR 426
>pdb|2IYF|A Chain A, The Crystal Structure Of Macrolide Glycosyltransferases: A
Blueprint For Antibiotic Engineering
pdb|2IYF|B Chain B, The Crystal Structure Of Macrolide Glycosyltransferases: A
Blueprint For Antibiotic Engineering
Length = 430
Score = 30.8 bits (68), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 19/73 (26%)
Query: 128 TQVYGFYDECLRKYGNANVWKIF------------------TDLFDYFP-LTALVESEIF 168
T+ FY EC+R +GN W + ++ D+ P L L ++++F
Sbjct: 244 TKQPAFYRECVRAFGNLPGWHLVLQIGRKVTPAELGELPDNVEVHDWVPQLAILRQADLF 303
Query: 169 CLHGGLSPSIETL 181
H G S E L
Sbjct: 304 VTHAGAGGSQEGL 316
>pdb|1AKJ|D Chain D, Complex Of The Human Mhc Class I Glycoprotein Hla-A2 And
The T Cell Coreceptor Cd8
pdb|1AKJ|E Chain E, Complex Of The Human Mhc Class I Glycoprotein Hla-A2 And
The T Cell Coreceptor Cd8
Length = 120
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 18/44 (40%), Gaps = 5/44 (11%)
Query: 178 IETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAG 221
+ LD N E+ C +L S+P C W PRGA
Sbjct: 5 VSPLDRTWNLGETVEL-----KCQVLLSNPTSGCSWLFQPRGAA 43
>pdb|1CD8|A Chain A, Crystal Structure Of A Soluble Form Of The Human T Cell
Co- Receptor Cd8 At 2.6 Angstroms Resolution
pdb|3QZW|G Chain G, Plasticity Of Human Cd8 Binding To Peptide-Hla-A2402
pdb|3QZW|H Chain H, Plasticity Of Human Cd8 Binding To Peptide-Hla-A2402
pdb|3QZW|I Chain I, Plasticity Of Human Cd8 Binding To Peptide-Hla-A2402
pdb|3QZW|J Chain J, Plasticity Of Human Cd8 Binding To Peptide-Hla-A2402
Length = 114
Score = 28.9 bits (63), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 18/44 (40%), Gaps = 5/44 (11%)
Query: 178 IETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAG 221
+ LD N E+ C +L S+P C W PRGA
Sbjct: 5 VSPLDRTWNLGETVEL-----KCQVLLSNPTSGCSWLFQPRGAA 43
>pdb|2QJC|A Chain A, Crystal Structure Of A Putative Diadenosine
Tetraphosphatase
Length = 262
Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 7/74 (9%)
Query: 52 VKSPVTICGDIHGQFHDLAELFR-IGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVR 110
V V I GDIHG L +L R + K + +GD V++G S V LL L
Sbjct: 17 VTGRVIIVGDIHGCRAQLEDLLRAVSFKQGSDTLVAVGDLVNKGPDSFGVVRLLKRLGA- 75
Query: 111 YPQRITILRGNHES 124
++L GNH++
Sbjct: 76 ----YSVL-GNHDA 84
>pdb|3R25|A Chain A, Crystal Structure Of Enolase Superfamily Member From
Vibrionales Bacterium Complexed With Mg And Glycerol In
The Active Site
pdb|3R25|B Chain B, Crystal Structure Of Enolase Superfamily Member From
Vibrionales Bacterium Complexed With Mg And Glycerol In
The Active Site
pdb|3R25|C Chain C, Crystal Structure Of Enolase Superfamily Member From
Vibrionales Bacterium Complexed With Mg And Glycerol In
The Active Site
pdb|3R25|D Chain D, Crystal Structure Of Enolase Superfamily Member From
Vibrionales Bacterium Complexed With Mg And Glycerol In
The Active Site
pdb|3R25|E Chain E, Crystal Structure Of Enolase Superfamily Member From
Vibrionales Bacterium Complexed With Mg And Glycerol In
The Active Site
pdb|3R25|F Chain F, Crystal Structure Of Enolase Superfamily Member From
Vibrionales Bacterium Complexed With Mg And Glycerol In
The Active Site
pdb|3R25|G Chain G, Crystal Structure Of Enolase Superfamily Member From
Vibrionales Bacterium Complexed With Mg And Glycerol In
The Active Site
pdb|3R25|H Chain H, Crystal Structure Of Enolase Superfamily Member From
Vibrionales Bacterium Complexed With Mg And Glycerol In
The Active Site
Length = 401
Score = 28.5 bits (62), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 22/50 (44%)
Query: 88 GDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDEC 137
G Y D+ Y T+T+ SL+ +Y + IL HE Q F E
Sbjct: 175 GSYYDQDQYMDNTLTMFKSLREKYGNQFHILHDVHERLFPNQAIQFAKEV 224
>pdb|3SBF|A Chain A, Crystal Structure Of The Mutant P311a Of Enolase
Superfamily Member From Vibrionales Bacterium Complexed
With Mg And D-Arabinonate
pdb|3SBF|B Chain B, Crystal Structure Of The Mutant P311a Of Enolase
Superfamily Member From Vibrionales Bacterium Complexed
With Mg And D-Arabinonate
pdb|3SBF|C Chain C, Crystal Structure Of The Mutant P311a Of Enolase
Superfamily Member From Vibrionales Bacterium Complexed
With Mg And D-Arabinonate
pdb|3SBF|D Chain D, Crystal Structure Of The Mutant P311a Of Enolase
Superfamily Member From Vibrionales Bacterium Complexed
With Mg And D-Arabinonate
Length = 401
Score = 28.5 bits (62), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 22/50 (44%)
Query: 88 GDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDEC 137
G Y D+ Y T+T+ SL+ +Y + IL HE Q F E
Sbjct: 175 GSYYDQDQYMDNTLTMFKSLREKYGNQFHILHDVHERLFPNQAIQFAKEV 224
>pdb|3DFH|A Chain A, Crystal Structure Of Putative Mandelate Racemase MUCONATE
Lactonizing Enzyme From Vibrionales Bacterium Swat-3
pdb|3DFH|B Chain B, Crystal Structure Of Putative Mandelate Racemase MUCONATE
Lactonizing Enzyme From Vibrionales Bacterium Swat-3
pdb|3DFH|C Chain C, Crystal Structure Of Putative Mandelate Racemase MUCONATE
Lactonizing Enzyme From Vibrionales Bacterium Swat-3
Length = 394
Score = 28.5 bits (62), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 22/50 (44%)
Query: 88 GDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDEC 137
G Y D+ Y T+T+ SL+ +Y + IL HE Q F E
Sbjct: 175 GSYYDQDQYMDNTLTMFKSLREKYGNQFHILHDVHERLFPNQAIQFAKEV 224
>pdb|1V8J|A Chain A, The Crystal Structure Of The Minimal Functional Domain Of
The Microtubule Destabilizer Kif2c Complexed With Mg-adp
pdb|1V8K|A Chain A, The Crystal Structure Of The Minimal Functional Domain Of
The Microtubule Destabilizer Kif2c Complexed With
Mg-Amppnp
Length = 410
Score = 27.7 bits (60), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 73/186 (39%), Gaps = 35/186 (18%)
Query: 34 VLCEKAKEILMDESNVQ----PVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGD 89
+L +KAK ++++S Q ++ + C D D+ ++ +G C + F
Sbjct: 226 LLNKKAKLRVLEDSRQQVQVVGLQEYLVTCAD------DVIKMINMGSACRTSGQTFANS 279
Query: 90 YVDRGYYSVETVTLLVSLKVRYPQRITI--LRGNH--------------ESRQITQVYGF 133
R + + +L+ K R + ++ L GN E +I +
Sbjct: 280 NSSRSHACFQ---ILLRTKGRLHGKFSLVDLAGNERGADTSSADRQTRMEGAEINKSLLA 336
Query: 134 YDECLRKYGNANVWKIF--TDLFDYFPLTALVESEIFCLHGGLSPSIE----TLDNIRNF 187
EC+R G F + L + + E+ C+ +SP I TL+ +R
Sbjct: 337 LKECIRALGQNKAHTPFRESKLTQVLRDSFIGENSRTCMIAMISPGISSCEYTLNTLRYA 396
Query: 188 DRVQEV 193
DRV+E+
Sbjct: 397 DRVKEL 402
>pdb|2F8S|A Chain A, Crystal Structure Of Aa-Ago With Externally-Bound Sirna
pdb|2F8S|B Chain B, Crystal Structure Of Aa-Ago With Externally-Bound Sirna
pdb|2F8T|A Chain A, Crystal Structure Of Aa-Ago With Externally-Bound Sirna
pdb|2F8T|B Chain B, Crystal Structure Of Aa-Ago With Externally-Bound Sirna
pdb|2NUB|A Chain A, Structure Of Aquifex Aeolicus Argonuate
Length = 706
Score = 27.3 bits (59), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 1 MSLDSVPSNSHGNLDEQIAQLMQCKPL-SEQEVRVLCEKAKEI-LMDESNVQPVKSPVTI 58
+S DSV ++ + E Q ++ + + E V VLC + + LM+ S+ QP+K P T+
Sbjct: 620 LSEDSVILATYNQVYEGTHQPIKVRKVYGELPVEVLCSQILSLTLMNYSSFQPIKLPATV 679
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.141 0.441
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,149,791
Number of Sequences: 62578
Number of extensions: 340710
Number of successful extensions: 750
Number of sequences better than 100.0: 45
Number of HSP's better than 100.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 675
Number of HSP's gapped (non-prelim): 45
length of query: 260
length of database: 14,973,337
effective HSP length: 97
effective length of query: 163
effective length of database: 8,903,271
effective search space: 1451233173
effective search space used: 1451233173
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 50 (23.9 bits)