Query 024923
Match_columns 260
No_of_seqs 236 out of 2071
Neff 7.9
Searched_HMMs 46136
Date Fri Mar 29 08:31:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024923.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024923hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0372 Serine/threonine speci 100.0 1.1E-63 2.4E-68 419.4 18.2 241 13-257 2-242 (303)
2 KOG0373 Serine/threonine speci 100.0 2.3E-59 4.9E-64 388.1 16.3 242 11-256 3-244 (306)
3 PTZ00239 serine/threonine prot 100.0 5.1E-55 1.1E-59 389.5 22.9 241 13-257 2-242 (303)
4 cd07415 MPP_PP2A_PP4_PP6 PP2A, 100.0 4.8E-55 1E-59 387.4 22.3 240 13-256 1-240 (285)
5 cd07420 MPP_RdgC Drosophila me 100.0 5.5E-55 1.2E-59 391.2 22.2 243 10-257 3-280 (321)
6 PTZ00480 serine/threonine-prot 100.0 8.3E-54 1.8E-58 383.1 22.2 243 9-256 6-257 (320)
7 cd07416 MPP_PP2B PP2B, metallo 100.0 4.1E-53 9E-58 378.6 23.6 240 12-256 1-248 (305)
8 PTZ00244 serine/threonine-prot 100.0 1.1E-52 2.3E-57 373.4 21.2 238 14-256 4-250 (294)
9 cd07414 MPP_PP1_PPKL PP1, PPKL 100.0 9.5E-53 2.1E-57 374.1 20.8 238 14-256 2-248 (293)
10 cd07417 MPP_PP5_C PP5, C-termi 100.0 2.6E-52 5.6E-57 374.4 22.2 242 10-256 12-259 (316)
11 KOG0374 Serine/threonine speci 100.0 4.2E-52 9E-57 373.3 17.3 226 26-255 31-258 (331)
12 smart00156 PP2Ac Protein phosp 100.0 2.9E-51 6.2E-56 361.6 20.8 225 27-256 1-226 (271)
13 KOG0371 Serine/threonine prote 100.0 5.1E-52 1.1E-56 351.1 14.8 246 6-255 12-257 (319)
14 KOG0375 Serine-threonine phosp 100.0 2.1E-51 4.7E-56 360.9 15.5 242 9-255 43-292 (517)
15 cd07418 MPP_PP7 PP7, metalloph 100.0 2.1E-50 4.6E-55 366.8 22.5 229 10-240 8-285 (377)
16 cd07419 MPP_Bsu1_C Arabidopsis 100.0 1.6E-48 3.4E-53 350.3 21.2 229 25-257 19-269 (311)
17 KOG0377 Protein serine/threoni 100.0 1.5E-39 3.3E-44 292.2 10.2 228 10-240 117-374 (631)
18 KOG0376 Serine-threonine phosp 100.0 1.5E-32 3.2E-37 251.4 10.2 235 12-251 168-408 (476)
19 cd00144 MPP_PPP_family phospho 100.0 1.3E-29 2.8E-34 217.4 16.7 148 57-211 1-157 (225)
20 PRK13625 bis(5'-nucleosyl)-tet 100.0 1.6E-29 3.4E-34 220.6 13.2 177 54-240 1-204 (245)
21 PHA02239 putative protein phos 99.9 1.4E-27 3.1E-32 206.7 12.7 156 54-232 1-202 (235)
22 cd07423 MPP_PrpE Bacillus subt 99.9 1.4E-27 3.1E-32 206.9 12.3 123 54-178 1-143 (234)
23 cd07413 MPP_PA3087 Pseudomonas 99.9 1.8E-27 3.9E-32 204.7 12.3 116 57-175 2-143 (222)
24 TIGR00668 apaH bis(5'-nucleosy 99.9 3.4E-28 7.4E-33 213.4 7.6 187 54-244 1-195 (279)
25 cd07422 MPP_ApaH Escherichia c 99.9 7E-28 1.5E-32 210.8 9.2 181 56-243 1-192 (257)
26 PRK11439 pphA serine/threonine 99.9 4.3E-27 9.3E-32 201.9 11.7 168 53-240 16-199 (218)
27 PRK00166 apaH diadenosine tetr 99.9 4E-27 8.7E-32 208.0 11.2 183 54-243 1-194 (275)
28 cd07421 MPP_Rhilphs Rhilph pho 99.9 4.3E-26 9.3E-31 200.6 14.3 168 55-227 3-263 (304)
29 cd07424 MPP_PrpA_PrpB PrpA and 99.9 2E-25 4.4E-30 190.0 15.3 165 54-230 1-180 (207)
30 PRK09968 serine/threonine-spec 99.9 9.2E-24 2E-28 181.2 13.4 160 53-230 14-191 (218)
31 cd07425 MPP_Shelphs Shewanella 99.9 1.6E-23 3.5E-28 178.5 8.7 121 57-178 1-141 (208)
32 PRK09453 phosphodiesterase; Pr 99.5 3.4E-13 7.4E-18 112.4 9.3 69 54-126 1-77 (182)
33 TIGR00040 yfcE phosphoesterase 99.3 3E-12 6.5E-17 104.2 8.3 63 54-125 1-64 (158)
34 cd00841 MPP_YfcE Escherichia c 99.3 1.1E-11 2.4E-16 100.2 9.5 84 55-176 1-87 (155)
35 PF00149 Metallophos: Calcineu 99.2 5.7E-11 1.2E-15 94.2 8.0 76 54-129 1-82 (200)
36 PF12850 Metallophos_2: Calcin 99.2 5.1E-11 1.1E-15 95.7 6.2 61 54-126 1-61 (156)
37 cd07379 MPP_239FB Homo sapiens 99.0 1.7E-10 3.7E-15 91.4 3.0 61 55-125 1-63 (135)
38 cd07394 MPP_Vps29 Homo sapiens 99.0 2E-09 4.2E-14 89.7 8.7 59 55-125 1-65 (178)
39 cd07397 MPP_DevT Myxococcus xa 99.0 1.9E-09 4E-14 93.4 8.4 113 55-177 2-160 (238)
40 cd07388 MPP_Tt1561 Thermus the 98.9 2.9E-09 6.2E-14 91.7 6.5 71 54-125 5-75 (224)
41 COG0622 Predicted phosphoester 98.7 3.9E-08 8.4E-13 81.3 8.0 64 54-125 2-65 (172)
42 cd07392 MPP_PAE1087 Pyrobaculu 98.7 4.1E-08 8.9E-13 81.1 6.0 66 56-127 1-67 (188)
43 cd07385 MPP_YkuE_C Bacillus su 98.5 1.3E-07 2.7E-12 80.7 5.8 71 54-126 2-77 (223)
44 PRK05340 UDP-2,3-diacylglucosa 98.5 1.8E-07 3.9E-12 81.3 6.5 71 54-126 1-84 (241)
45 PRK11340 phosphodiesterase Yae 98.5 1.8E-07 4E-12 82.8 6.4 71 53-125 49-125 (271)
46 cd00838 MPP_superfamily metall 98.5 4.2E-07 9E-12 69.5 7.4 67 57-123 1-69 (131)
47 cd07390 MPP_AQ1575 Aquifex aeo 98.5 5.1E-07 1.1E-11 74.3 8.0 67 56-127 1-84 (168)
48 cd07404 MPP_MS158 Microscilla 98.4 1.3E-07 2.9E-12 77.2 3.1 67 56-125 1-68 (166)
49 TIGR03729 acc_ester putative p 98.3 1.5E-06 3.2E-11 75.4 5.7 68 55-125 1-74 (239)
50 TIGR01854 lipid_A_lpxH UDP-2,3 98.2 2.3E-06 5E-11 74.0 6.4 68 56-125 1-81 (231)
51 PRK04036 DNA polymerase II sma 98.2 6.2E-06 1.3E-10 79.2 8.5 114 52-173 242-387 (504)
52 TIGR00619 sbcd exonuclease Sbc 98.1 4.5E-06 9.8E-11 73.3 6.5 72 54-125 1-88 (253)
53 cd07396 MPP_Nbla03831 Homo sap 98.1 5.4E-06 1.2E-10 73.2 6.9 72 55-126 2-87 (267)
54 cd07403 MPP_TTHA0053 Thermus t 98.0 7.9E-06 1.7E-10 64.3 5.1 56 57-123 1-56 (129)
55 cd07402 MPP_GpdQ Enterobacter 98.0 8.8E-06 1.9E-10 70.1 5.7 67 55-125 1-83 (240)
56 PHA02546 47 endonuclease subun 98.0 1.1E-05 2.4E-10 73.8 6.1 71 54-125 1-89 (340)
57 cd00844 MPP_Dbr1_N Dbr1 RNA la 98.0 3E-05 6.4E-10 68.4 8.5 69 56-125 1-86 (262)
58 cd07391 MPP_PF1019 Pyrococcus 97.9 3.1E-05 6.7E-10 63.8 6.8 57 69-126 30-89 (172)
59 cd07400 MPP_YydB Bacillus subt 97.9 2.2E-05 4.8E-10 62.3 5.4 68 56-124 1-80 (144)
60 cd00840 MPP_Mre11_N Mre11 nucl 97.8 2.8E-05 6E-10 65.9 5.5 72 55-127 1-91 (223)
61 PRK11148 cyclic 3',5'-adenosin 97.8 3.4E-05 7.3E-10 68.4 6.2 71 53-125 14-98 (275)
62 TIGR00024 SbcD_rel_arch putati 97.8 4.9E-05 1.1E-09 65.6 6.6 69 54-126 15-103 (225)
63 cd07398 MPP_YbbF-LpxH Escheric 97.8 6.3E-05 1.4E-09 63.7 7.0 69 57-126 1-83 (217)
64 cd07399 MPP_YvnB Bacillus subt 97.8 4.2E-05 9.2E-10 65.3 5.7 69 55-125 2-82 (214)
65 COG0639 ApaH Diadenosine tetra 97.7 3.1E-05 6.7E-10 60.6 4.0 110 128-240 4-122 (155)
66 cd08165 MPP_MPPE1 human MPPE1 97.7 4E-05 8.7E-10 62.3 4.7 49 78-126 36-90 (156)
67 cd07383 MPP_Dcr2 Saccharomyces 97.7 9.5E-05 2E-09 62.2 6.5 70 54-123 3-87 (199)
68 cd07393 MPP_DR1119 Deinococcus 97.7 7.6E-05 1.6E-09 64.5 5.5 65 56-124 1-83 (232)
69 TIGR00583 mre11 DNA repair pro 97.7 0.00011 2.5E-09 68.6 6.9 54 53-106 3-68 (405)
70 COG1409 Icc Predicted phosphoh 97.6 0.00015 3.2E-09 63.7 7.3 73 54-128 1-81 (301)
71 COG2129 Predicted phosphoester 97.5 0.00021 4.5E-09 61.0 6.3 71 53-127 3-79 (226)
72 COG1408 Predicted phosphohydro 97.5 0.00018 4E-09 64.1 6.2 73 53-127 44-120 (284)
73 cd07395 MPP_CSTP1 Homo sapiens 97.5 0.00022 4.7E-09 62.5 6.4 69 55-125 6-99 (262)
74 PRK10966 exonuclease subunit S 97.5 0.00015 3.3E-09 67.9 5.7 71 54-125 1-87 (407)
75 cd07401 MPP_TMEM62_N Homo sapi 97.5 0.00023 4.9E-09 62.6 6.4 70 56-125 2-89 (256)
76 cd07386 MPP_DNA_pol_II_small_a 97.5 0.00016 3.4E-09 62.9 5.2 68 57-126 2-95 (243)
77 cd00839 MPP_PAPs purple acid p 97.5 9.3E-05 2E-09 65.8 3.6 69 54-126 5-82 (294)
78 cd08166 MPP_Cdc1_like_1 unchar 97.1 0.00074 1.6E-08 56.9 4.9 49 77-125 39-93 (195)
79 cd07380 MPP_CWF19_N Schizosacc 97.1 0.0013 2.7E-08 53.3 5.9 66 57-123 1-68 (150)
80 COG4186 Predicted phosphoester 97.1 0.0017 3.8E-08 52.4 6.3 67 55-125 5-86 (186)
81 cd00845 MPP_UshA_N_like Escher 97.0 0.00095 2.1E-08 58.0 5.1 66 55-125 2-82 (252)
82 COG2908 Uncharacterized protei 97.0 0.0035 7.6E-08 54.0 8.4 67 57-125 1-80 (237)
83 PF14582 Metallophos_3: Metall 97.0 0.00051 1.1E-08 58.8 2.9 73 53-126 5-103 (255)
84 cd07384 MPP_Cdc1_like Saccharo 97.0 0.0013 2.9E-08 54.2 5.3 51 76-126 41-101 (171)
85 COG0420 SbcD DNA repair exonuc 96.9 0.0021 4.5E-08 59.8 6.6 71 54-126 1-89 (390)
86 PLN02533 probable purple acid 96.8 0.0014 3E-08 61.8 4.3 71 53-126 139-212 (427)
87 COG1407 Predicted ICC-like pho 96.8 0.0064 1.4E-07 52.6 7.8 72 52-126 18-111 (235)
88 cd07410 MPP_CpdB_N Escherichia 96.5 0.0031 6.8E-08 55.8 4.4 66 55-125 2-95 (277)
89 cd08163 MPP_Cdc1 Saccharomyces 96.3 0.01 2.2E-07 52.3 6.5 46 80-125 45-97 (257)
90 cd07378 MPP_ACP5 Homo sapiens 96.1 0.013 2.8E-07 51.6 5.9 69 55-125 2-83 (277)
91 cd08164 MPP_Ted1 Saccharomyces 96.0 0.013 2.9E-07 49.2 5.5 65 61-125 24-111 (193)
92 PF08321 PPP5: PPP5 TPR repeat 95.9 0.01 2.2E-07 44.2 3.7 41 12-52 55-95 (95)
93 cd07408 MPP_SA0022_N Staphyloc 95.8 0.013 2.8E-07 51.3 4.8 66 55-125 2-82 (257)
94 KOG2863 RNA lariat debranching 95.3 0.037 8E-07 50.5 5.6 72 54-125 1-88 (456)
95 KOG0376 Serine-threonine phosp 95.3 0.0065 1.4E-07 57.1 0.8 115 26-141 14-132 (476)
96 cd07412 MPP_YhcR_N Bacillus su 95.3 0.031 6.6E-07 49.9 5.1 66 55-125 2-88 (288)
97 COG1768 Predicted phosphohydro 95.1 0.038 8.3E-07 45.8 4.7 43 80-126 43-87 (230)
98 cd07411 MPP_SoxB_N Thermus the 94.8 0.039 8.4E-07 48.5 4.5 65 55-125 2-95 (264)
99 cd07409 MPP_CD73_N CD73 ecto-5 94.7 0.068 1.5E-06 47.5 5.8 66 55-125 2-94 (281)
100 cd00842 MPP_ASMase acid sphing 94.2 0.071 1.5E-06 47.5 4.7 71 56-127 40-124 (296)
101 PRK09419 bifunctional 2',3'-cy 93.9 0.07 1.5E-06 56.6 4.8 67 54-125 661-736 (1163)
102 KOG1432 Predicted DNA repair e 93.8 0.13 2.8E-06 46.7 5.6 70 55-125 55-147 (379)
103 TIGR00282 metallophosphoestera 93.8 0.12 2.5E-06 45.8 5.1 67 54-125 1-71 (266)
104 cd07406 MPP_CG11883_N Drosophi 93.6 0.13 2.7E-06 45.2 5.1 65 55-124 2-82 (257)
105 PF06874 FBPase_2: Firmicute f 93.3 0.076 1.6E-06 51.7 3.4 60 64-128 167-227 (640)
106 KOG3662 Cell division control 92.9 0.14 3E-06 47.8 4.3 45 80-124 93-143 (410)
107 cd07405 MPP_UshA_N Escherichia 92.3 0.15 3.3E-06 45.4 3.8 66 55-125 2-87 (285)
108 COG1311 HYS2 Archaeal DNA poly 92.0 1.4 3.1E-05 41.9 9.8 74 55-128 227-324 (481)
109 cd08162 MPP_PhoA_N Synechococc 90.9 0.37 7.9E-06 43.7 4.8 65 55-124 2-90 (313)
110 cd07407 MPP_YHR202W_N Saccharo 90.1 0.36 7.7E-06 43.1 3.9 67 54-125 6-97 (282)
111 cd07387 MPP_PolD2_C PolD2 (DNA 90.1 5.8 0.00013 34.9 11.4 45 82-128 44-110 (257)
112 COG0737 UshA 5'-nucleotidase/2 89.9 0.38 8.2E-06 46.5 4.2 68 53-125 26-115 (517)
113 PF04042 DNA_pol_E_B: DNA poly 89.8 0.41 8.9E-06 40.3 3.8 72 56-127 1-93 (209)
114 cd07382 MPP_DR1281 Deinococcus 89.1 0.88 1.9E-05 40.0 5.5 66 55-125 1-70 (255)
115 PRK09420 cpdB bifunctional 2', 88.5 0.58 1.3E-05 46.6 4.4 68 52-124 24-121 (649)
116 TIGR01390 CycNucDiestase 2',3' 88.2 0.6 1.3E-05 46.4 4.3 66 54-124 3-98 (626)
117 PRK09419 bifunctional 2',3'-cy 87.5 0.66 1.4E-05 49.4 4.3 67 53-124 41-138 (1163)
118 KOG2476 Uncharacterized conser 87.4 1.5 3.3E-05 41.4 6.1 69 53-122 5-75 (528)
119 KOG3325 Membrane coat complex 87.0 1 2.2E-05 36.3 4.1 60 56-124 3-65 (183)
120 KOG3947 Phosphoesterases [Gene 86.2 1.1 2.4E-05 39.7 4.3 66 53-126 61-127 (305)
121 PTZ00422 glideosome-associated 85.7 1.2 2.5E-05 41.7 4.4 72 52-125 25-109 (394)
122 KOG1378 Purple acid phosphatas 85.1 0.9 2E-05 42.9 3.4 74 52-128 146-224 (452)
123 TIGR01530 nadN NAD pyrophospha 84.4 1.9 4.1E-05 42.1 5.5 66 55-125 2-94 (550)
124 PRK11907 bifunctional 2',3'-cy 83.5 1.6 3.4E-05 44.7 4.6 67 53-124 115-212 (814)
125 PTZ00235 DNA polymerase epsilo 83.0 3 6.5E-05 37.3 5.7 73 53-125 27-122 (291)
126 COG3855 Fbp Uncharacterized pr 82.6 0.92 2E-05 42.9 2.3 42 81-127 191-232 (648)
127 PRK09558 ushA bifunctional UDP 82.5 1.5 3.2E-05 42.8 3.9 68 53-125 34-121 (551)
128 KOG2310 DNA repair exonuclease 82.1 3.1 6.7E-05 40.2 5.7 53 53-105 13-77 (646)
129 KOG3339 Predicted glycosyltran 81.4 17 0.00036 30.5 9.0 85 82-172 40-140 (211)
130 PRK09418 bifunctional 2',3'-cy 77.7 3 6.5E-05 42.5 4.4 67 53-124 39-141 (780)
131 KOG2679 Purple (tartrate-resis 66.7 3.9 8.5E-05 36.4 2.0 69 53-125 43-126 (336)
132 PF06874 FBPase_2: Firmicute f 58.7 8.4 0.00018 38.0 2.8 25 52-76 31-55 (640)
133 PF02875 Mur_ligase_C: Mur lig 50.9 31 0.00066 24.6 4.2 68 54-121 12-81 (91)
134 COG4030 Uncharacterized protei 50.0 65 0.0014 28.1 6.5 59 55-124 183-241 (315)
135 PF12641 Flavodoxin_3: Flavodo 47.8 95 0.0021 25.2 7.0 52 57-108 2-66 (160)
136 cd01533 4RHOD_Repeat_2 Member 39.7 1.2E+02 0.0026 22.1 6.1 88 23-120 8-100 (109)
137 TIGR00282 metallophosphoestera 37.2 22 0.00047 31.5 1.8 39 83-125 2-41 (266)
138 PRK10773 murF UDP-N-acetylmura 36.7 1.1E+02 0.0024 28.9 6.7 66 54-120 325-392 (453)
139 PF13258 DUF4049: Domain of un 36.1 49 0.0011 28.9 3.7 87 82-176 86-186 (318)
140 PRK04531 acetylglutamate kinas 35.9 39 0.00084 31.8 3.3 36 65-118 6-41 (398)
141 cd07382 MPP_DR1281 Deinococcus 35.1 30 0.00065 30.4 2.3 39 83-125 1-40 (255)
142 PF09949 DUF2183: Uncharacteri 27.5 2.5E+02 0.0054 20.8 5.9 43 67-118 53-95 (100)
143 COG0634 Hpt Hypoxanthine-guani 26.6 3.8E+02 0.0082 22.3 7.6 76 26-105 11-117 (178)
144 PF09860 DUF2087: Uncharacteri 26.0 83 0.0018 21.9 2.9 37 3-39 3-42 (71)
145 COG4320 Uncharacterized protei 25.8 47 0.001 30.4 1.9 57 44-108 47-107 (410)
146 PF02885 Glycos_trans_3N: Glyc 25.1 1.1E+02 0.0024 20.6 3.4 27 13-39 1-27 (66)
147 COG3855 Fbp Uncharacterized pr 25.0 33 0.00071 32.9 0.9 24 53-76 37-60 (648)
148 COG3207 DIT1 Pyoverdine/dityro 24.2 1.3E+02 0.0028 26.8 4.3 42 49-90 101-156 (330)
149 TIGR01143 murF UDP-N-acetylmur 23.8 2.4E+02 0.0051 26.3 6.4 69 53-121 295-364 (417)
150 TIGR00024 SbcD_rel_arch putati 23.8 2.3E+02 0.005 24.2 5.9 60 23-90 34-99 (225)
151 KOG3770 Acid sphingomyelinase 23.6 1.4E+02 0.0031 29.4 4.9 61 68-128 196-266 (577)
152 TIGR01428 HAD_type_II 2-haloal 22.2 2.7E+02 0.0059 22.4 5.9 65 54-121 109-173 (198)
153 KOG3425 Uncharacterized conser 22.0 2.4E+02 0.0051 22.1 4.9 60 66-125 12-79 (128)
154 COG1692 Calcineurin-like phosp 21.8 1.1E+02 0.0023 27.0 3.3 66 54-124 1-70 (266)
No 1
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-63 Score=419.35 Aligned_cols=241 Identities=65% Similarity=1.173 Sum_probs=233.8
Q ss_pred cHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhcCCCcccccCceeEecCCCCCHHHHHHHHHHcCCCCCCceeeeeceec
Q 024923 13 NLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVD 92 (260)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vflGD~vd 92 (260)
++++.++.+.+++.+++.++..||.++.++|.+|+|+..++.|+.|+|||||++.+|..+|+..|..|...|+|||||||
T Consensus 2 dldr~ie~L~~~~li~E~eV~~LC~~~~eiL~~E~NV~~i~tPvtvcGDIHGQf~Dllelf~igG~~~~t~YLFLGDyVD 81 (303)
T KOG0372|consen 2 DLDRQIEQLRRCELIAESEVKALCAKVREILVEESNVQRIDTPVTVCGDIHGQFYDLLELFRIGGDVPETNYLFLGDYVD 81 (303)
T ss_pred cHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhcCCCceecCCCcEEeecccchHHHHHHHHHhCCCCCCCceEeecchhc
Confidence 58899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHhcchhCCCcEEEECCCcchhhhhhhhcchHHHHHHhCChhhHHHHHHHhhcCCeEEEEcCcEEEEcC
Q 024923 93 RGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHG 172 (260)
Q Consensus 93 rG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHg 172 (260)
||.+|+|++.+|+.||.+||+++.+||||||.+.+++.|||++||+++||+..+|+.+.+.|+.||++++++++++||||
T Consensus 82 RG~~SvEt~lLLl~lK~rYP~ritLiRGNHEsRqitqvYGFY~EclrKYG~~~vWr~c~eiFdyL~l~aiid~kifCVHG 161 (303)
T KOG0372|consen 82 RGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSANVWRYCTEIFDYLSLAAIIDGKIFCVHG 161 (303)
T ss_pred cccchHHHHHHHHHHhhcCcceeEEeeccchhhhhhhhhhHHHHHHHHcCChHHHHHHHHHHHhhhHhheecCcEEEEcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcHHHHhcccccccCCCCCCccccccCCCCCCCCCCcCCCCCcEEEcCCchHHHHHHhhCCCcchhhhhheeee
Q 024923 173 GLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQVNTIALSFRHCMSPIQKTVFVAYFLV 252 (260)
Q Consensus 173 Gi~~~~~~~~~~~~~~r~~~~~~~~~~~~llWsdp~~~~~~~~~~rg~~~~fGh~h~~~~~f~~~n~~i~~~i~~~~~~~ 252 (260)
|++|++.+++||+.+.|.+++|.++.++|+|||||++..+|..++||+|+.||.+ +++.|++.|++.- |+++|+++
T Consensus 162 GlSP~i~~lDqIr~lDR~~Eiph~g~m~DllWSDPee~~g~~~SPRGaGylFG~d--vv~~F~~~N~~~~--I~RaHQLv 237 (303)
T KOG0372|consen 162 GLSPSIQTLDQIRVLDRKQEVPHDGAMCDLLWSDPEEGPGWGLSPRGAGYLFGED--VVESFLEANGLSL--ICRAHQLV 237 (303)
T ss_pred CCCcchhhHHHHHHhhccccCCCCCcchheeccCcccCCCcccCCCCccccccHH--HHHHHHHhCChHH--HHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999 9999999999643 68999988
Q ss_pred eeccc
Q 024923 253 VAGHI 257 (260)
Q Consensus 253 ~~gh~ 257 (260)
..|-+
T Consensus 238 ~eGyk 242 (303)
T KOG0372|consen 238 MEGYK 242 (303)
T ss_pred HhhHH
Confidence 77643
No 2
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-59 Score=388.09 Aligned_cols=242 Identities=60% Similarity=1.106 Sum_probs=234.2
Q ss_pred cccHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhcCCCcccccCceeEecCCCCCHHHHHHHHHHcCCCCCCceeeeece
Q 024923 11 HGNLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDY 90 (260)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vflGD~ 90 (260)
+-+++++|+.+++++.+|+++++.||+-++++|..|+++.+++.|+.|+|||||++.+|..+|+..|.-|...|||+|||
T Consensus 3 ~~d~d~wi~~vk~ckyLpE~elk~LCe~v~d~L~eEsNvqPV~tPVTvCGDIHGQFyDL~eLFrtgG~vP~tnYiFmGDf 82 (306)
T KOG0373|consen 3 KMDLDQWIETVKKCKYLPENELKRLCEMVKDILMEESNVQPVSTPVTVCGDIHGQFYDLLELFRTGGQVPDTNYIFMGDF 82 (306)
T ss_pred cCCHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhhhcCccccCCCeeEeeccchhHHHHHHHHHhcCCCCCcceEEeccc
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHHHHhcchhCCCcEEEECCCcchhhhhhhhcchHHHHHHhCChhhHHHHHHHhhcCCeEEEEcCcEEEE
Q 024923 91 VDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCL 170 (260)
Q Consensus 91 vdrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~v 170 (260)
||||.+|+|+..+++.||.+||.++.+||||||.+.+...|||++||..+||....|+.+++.|+.|+++++|+++++||
T Consensus 83 VDRGyySLEtfT~l~~LkaryP~~ITLlRGNHEsRqitqVYGFydECq~KYGnan~wkycckVFD~LtlaAiID~~vLCV 162 (306)
T KOG0373|consen 83 VDRGYYSLETFTLLLLLKARYPAKITLLRGNHESRQITQVYGFYDECQNKYGNANVWKYCCKVFDFLTLAAIIDEKVLCV 162 (306)
T ss_pred cccccccHHHHHHHHHHhhcCCceeEEeeccchhhhhhhhhhhHHHHHhhcCCchHHHHHHHHHhhhhHHHHhcCcEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCcHHHHhcccccccCCCCCCccccccCCCCCCCCCCcCCCCCcEEEcCCchHHHHHHhhCCCcchhhhhhee
Q 024923 171 HGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQVNTIALSFRHCMSPIQKTVFVAYF 250 (260)
Q Consensus 171 HgGi~~~~~~~~~~~~~~r~~~~~~~~~~~~llWsdp~~~~~~~~~~rg~~~~fGh~h~~~~~f~~~n~~i~~~i~~~~~ 250 (260)
|||+||+...++||+-+.|.+++|.++.++|++||||++.+.|..++||+|++||+. ++.+|...|++ ++ |+++|+
T Consensus 163 HGGLSPdirtlDqir~i~R~qEiPh~G~fcDlmWSDPedve~W~vSpRGAGwlFGsk--Vt~eF~~iN~L-~L-icRaHQ 238 (306)
T KOG0373|consen 163 HGGLSPDIRTLDQIRLIERNQEIPHEGPFCDLMWSDPEDVETWAVSPRGAGWLFGSK--VTTEFNHINNL-NL-ICRAHQ 238 (306)
T ss_pred cCCCCccceeHHHHHhHHhhccCCCCCCccceeccChhhhhhheeCCCCcceeechh--hhHHHHhccch-HH-HHhHHH
Confidence 999999999999999999999999999999999999999999999999999999999 99999999985 55 789999
Q ss_pred eeeecc
Q 024923 251 LVVAGH 256 (260)
Q Consensus 251 ~~~~gh 256 (260)
++--|-
T Consensus 239 LV~EG~ 244 (306)
T KOG0373|consen 239 LVQEGF 244 (306)
T ss_pred HHHhhH
Confidence 876654
No 3
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=100.00 E-value=5.1e-55 Score=389.50 Aligned_cols=241 Identities=55% Similarity=1.049 Sum_probs=226.4
Q ss_pred cHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhcCCCcccccCceeEecCCCCCHHHHHHHHHHcCCCCCCceeeeeceec
Q 024923 13 NLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVD 92 (260)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vflGD~vd 92 (260)
+++++++.++++..++++++.+||++|++++++||++++++.+++|+||||||+.+|.++++..+..+.+++||||||||
T Consensus 2 ~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVD 81 (303)
T PTZ00239 2 DIDRHIATLLNGGCLPERDLKLICERAKEIFLEESNVQPVRAPVNVCGDIHGQFYDLQALFKEGGDIPNANYIFIGDFVD 81 (303)
T ss_pred CHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEeeeEcC
Confidence 47899999999999999999999999999999999999999999999999999999999999999888899999999999
Q ss_pred CCCCcHHHHHHHHhcchhCCCcEEEECCCcchhhhhhhhcchHHHHHHhCChhhHHHHHHHhhcCCeEEEEcCcEEEEcC
Q 024923 93 RGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHG 172 (260)
Q Consensus 93 rG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHg 172 (260)
||++|.|++.+++++|..+|.+++++|||||.+.++..+||..|+..+|+....|..+.++|+.||++++++++++||||
T Consensus 82 RG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~ky~~~~~~~~~~~~f~~LPlaaii~~~i~cvHg 161 (303)
T PTZ00239 82 RGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNSNPWRLFMDVFDCLPLAALIEGQILCVHG 161 (303)
T ss_pred CCCCHHHHHHHHHHhhhcCCCcEEEEecccchHHHhhhcChHHHHHHHhcChhHHHHHHHHHHhCchheEEcCeEEEEcC
Confidence 99999999999999999999999999999999999999999999999998778899999999999999999999999999
Q ss_pred CCCCCCCcHHHHhcccccccCCCCCCccccccCCCCCCCCCCcCCCCCcEEEcCCchHHHHHHhhCCCcchhhhhheeee
Q 024923 173 GLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQVNTIALSFRHCMSPIQKTVFVAYFLV 252 (260)
Q Consensus 173 Gi~~~~~~~~~~~~~~r~~~~~~~~~~~~llWsdp~~~~~~~~~~rg~~~~fGh~h~~~~~f~~~n~~i~~~i~~~~~~~ 252 (260)
|++|...++++++.+.|+.+.|.++.++|++||||....+|.+++||.|++||.+ ++++||++|++ +. |++||+++
T Consensus 162 Gi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~Rg~g~~fg~~--~~~~Fl~~n~l-~~-iiR~He~~ 237 (303)
T PTZ00239 162 GLSPDMRTIDQIRTIDRKIEIPHEGPFCDLMWSDPEEVEYWAVNSRGAGYLFGAK--VTKEFCRLNDL-TL-ICRAHQLV 237 (303)
T ss_pred ccCcccccHhhhccccCCCCCCCCCCceeeEecCccccCCCccCCCCCccccCHH--HHHHHHHHCCC-cE-EEEcChhh
Confidence 9999999999999999999999999999999999998888999999999999999 99999999996 22 46666665
Q ss_pred eeccc
Q 024923 253 VAGHI 257 (260)
Q Consensus 253 ~~gh~ 257 (260)
-.|.+
T Consensus 238 ~~G~~ 242 (303)
T PTZ00239 238 MEGYK 242 (303)
T ss_pred ccceE
Confidence 55543
No 4
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=100.00 E-value=4.8e-55 Score=387.43 Aligned_cols=240 Identities=73% Similarity=1.235 Sum_probs=225.6
Q ss_pred cHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhcCCCcccccCceeEecCCCCCHHHHHHHHHHcCCCCCCceeeeeceec
Q 024923 13 NLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVD 92 (260)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vflGD~vd 92 (260)
+++++++++.++..++++++.+||++|++++++||++++++.+++||||||||+.+|.++|+..++++.+++||||||||
T Consensus 1 ~~~~~~~~~~~~~~l~~~~~~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~dL~~ll~~~~~~~~~~~lfLGDyVD 80 (285)
T cd07415 1 DLDKWIEQLKKCELLPESEVKSLCEKAKEILVKESNVQRVRSPVTVCGDIHGQFYDLLELFRVGGDPPDTNYLFLGDYVD 80 (285)
T ss_pred CHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCEEecCCCEEEEEeCCCCHHHHHHHHHHcCCCCCCeEEEEeEECC
Confidence 37889999999999999999999999999999999999999999999999999999999999999988899999999999
Q ss_pred CCCCcHHHHHHHHhcchhCCCcEEEECCCcchhhhhhhhcchHHHHHHhCChhhHHHHHHHhhcCCeEEEEcCcEEEEcC
Q 024923 93 RGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHG 172 (260)
Q Consensus 93 rG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHg 172 (260)
||++|.|++.++++++..+|.+++++|||||.+.++..+||..|+..+|+...+|..+.++|+.||++++++++++||||
T Consensus 81 RG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~ygf~~e~~~~y~~~~l~~~~~~~f~~lPlaaii~~~i~cvHg 160 (285)
T cd07415 81 RGYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRKYGNANVWKYCTDLFDYLPLAALIDNQIFCVHG 160 (285)
T ss_pred CCcCHHHHHHHHHHHhhcCCCcEEEEecccchHhhhhhcchhHHHHHhcCchHHHHHHHHHHHHhHHHhEeCCeEEEEcC
Confidence 99999999999999999999999999999999999999999999999998778999999999999999999999999999
Q ss_pred CCCCCCCcHHHHhcccccccCCCCCCccccccCCCCCCCCCCcCCCCCcEEEcCCchHHHHHHhhCCCcchhhhhheeee
Q 024923 173 GLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQVNTIALSFRHCMSPIQKTVFVAYFLV 252 (260)
Q Consensus 173 Gi~~~~~~~~~~~~~~r~~~~~~~~~~~~llWsdp~~~~~~~~~~rg~~~~fGh~h~~~~~f~~~n~~i~~~i~~~~~~~ 252 (260)
|++|...++++++.++|+.+.+.++.+.|++||||....+|.+++||.|++||.+ ++++||++|++ +. |++||+++
T Consensus 161 Gi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~Rg~g~~fg~~--~~~~Fl~~n~l-~~-iiR~He~~ 236 (285)
T cd07415 161 GLSPSIDTLDQIRAIDRFQEVPHEGPMCDLLWSDPDDIEGWGISPRGAGYLFGQD--VVEEFNHNNGL-TL-ICRAHQLV 236 (285)
T ss_pred CCCCCcccHHHhhcccCCCCCCCCCCccceEecCCCccCCCCcCCCCCccccCHH--HHHHHHHHCCC-eE-EEEcCccc
Confidence 9999999999999999999999999999999999998889999999999999999 99999999996 33 45666655
Q ss_pred eecc
Q 024923 253 VAGH 256 (260)
Q Consensus 253 ~~gh 256 (260)
-.|.
T Consensus 237 ~~G~ 240 (285)
T cd07415 237 MEGY 240 (285)
T ss_pred cceE
Confidence 5554
No 5
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=100.00 E-value=5.5e-55 Score=391.18 Aligned_cols=243 Identities=29% Similarity=0.538 Sum_probs=213.9
Q ss_pred CcccHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhcCCCcccccC----ceeEecCCCCCHHHHHHHHHHcCCCC-CCce
Q 024923 10 SHGNLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKS----PVTICGDIHGQFHDLAELFRIGGKCP-DTNY 84 (260)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~~~~~~----~i~viGDIHG~~~~L~~ll~~~~~~~-~~~~ 84 (260)
++++++++++.+.+.+.++++++.+||++|+++|++||+++++.. |++||||||||+.+|.++|+..++++ .+++
T Consensus 3 ~~~~~~~~i~~~~~~~~l~~~~i~~L~~~a~~il~~ep~vl~i~~~~~~~~~vvGDiHG~~~dL~~il~~~g~~~~~~~~ 82 (321)
T cd07420 3 TKDHIDALIEAFKEKQLLHAKYVLLILREARKVLKQLPNISRVSTSISKQVTICGDLHGKLDDLFLIFYKNGLPSPENPY 82 (321)
T ss_pred CHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCeEEEEeCCCCHHHHHHHHHHcCCCCccceE
Confidence 456799999999999999999999999999999999999998865 89999999999999999999999875 4679
Q ss_pred eeeeceecCCCCcHHHHHHHHhcchhCCCcEEEECCCcchhhhhhhhcchHHHHHHhCC--hhhHHHHHHHhhcCCeEEE
Q 024923 85 LFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGN--ANVWKIFTDLFDYFPLTAL 162 (260)
Q Consensus 85 vflGD~vdrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~--~~~~~~~~~~~~~lP~~~~ 162 (260)
||||||||||++|+||+.+|+++|..+|+++++||||||.+.++..|||.+|+..+|+. ..+|+.+.++|+.||++++
T Consensus 83 lFLGDyVDRG~~s~Evl~ll~~lk~~~p~~v~llRGNHE~~~~~~~yGf~~e~~~~y~~~~~~l~~~~~~~F~~LPlaai 162 (321)
T cd07420 83 VFNGDFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKYKLHGKKILRLLEDVFSWLPLATI 162 (321)
T ss_pred EEeccccCCCCCcHHHHHHHHHHhhcCCCcEEEecCchhhhhhhhhcChHHHHHHHhCccHHHHHHHHHHHHHhCCceEE
Confidence 99999999999999999999999999999999999999999999999999999999984 6799999999999999999
Q ss_pred EcCcEEEEcCCCCCCCCcHHHHhccccccc-----CCC----------------------CCCccccccCCCCCCCC-CC
Q 024923 163 VESEIFCLHGGLSPSIETLDNIRNFDRVQE-----VPH----------------------EGPMCDLLWSDPDDRCG-WG 214 (260)
Q Consensus 163 i~~~~l~vHgGi~~~~~~~~~~~~~~r~~~-----~~~----------------------~~~~~~llWsdp~~~~~-~~ 214 (260)
++++++|||||++| ..++++++.++|+.. +|. .+.+.|+|||||....+ |.
T Consensus 163 i~~~i~cvHGGi~~-~~~l~~i~~i~r~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlLWSDP~~~~~~~~ 241 (321)
T cd07420 163 IDNKILVVHGGISD-STDLDLLDKIDRHKYVSVLRPPLRKGMEELTGEEEDPSEPLDKTEWRQILDILWSDPKAQKGCKP 241 (321)
T ss_pred EcCCEEEEeCCCCC-ccCHHHHHhhhccccccccCCCccccccccccccccccccccccccchhheeeecCCccCCCCCc
Confidence 99999999999987 457889988877421 111 03568999999997544 66
Q ss_pred cCCCCCcEEEcCCchHHHHHHhhCCCcchhhhhheeeeeeccc
Q 024923 215 ISPRGAGYTFGQVNTIALSFRHCMSPIQKTVFVAYFLVVAGHI 257 (260)
Q Consensus 215 ~~~rg~~~~fGh~h~~~~~f~~~n~~i~~~i~~~~~~~~~gh~ 257 (260)
+++||.|++||.+ ++++||++|++ +. |++||+++-.|.+
T Consensus 242 ~~~RG~g~~FG~~--~~~~Fl~~n~l-~~-IIR~He~v~~G~~ 280 (321)
T cd07420 242 NTFRGGGCYFGPD--VTSKVLQKHGL-SL-LIRSHECKPEGYE 280 (321)
T ss_pred cCCCCCccccCHH--HHHHHHHHCCC-cE-EEEcChhhhcceE
Confidence 7789999999999 99999999996 22 4566666555543
No 6
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=100.00 E-value=8.3e-54 Score=383.06 Aligned_cols=243 Identities=44% Similarity=0.885 Sum_probs=224.4
Q ss_pred CCcccHHHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHhcCCCcccccCceeEecCCCCCHHHHHHHHHHcCCCC
Q 024923 9 NSHGNLDEQIAQLMQCK--------PLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCP 80 (260)
Q Consensus 9 ~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~ 80 (260)
.+..+++++++.+.+.. .++++++.+||++|.++|++||++++++.+++||||||||+.+|.++++..++++
T Consensus 6 ~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~ep~ll~i~~~i~vvGDIHG~~~dL~~l~~~~g~~~ 85 (320)
T PTZ00480 6 KGEIDVDNIIERLLSVRGSKPGKNVNLTEAEVRGLCIKARDIFISQPILLELEAPLKICGDVHGQYFDLLRLFEYGGYPP 85 (320)
T ss_pred ccCcCHHHHHHHHHhccccCccccCCCCHHHHHHHHHHHHHHHHhCCceEecCCCeEEEeecccCHHHHHHHHHhcCCCC
Confidence 34456999999999764 5899999999999999999999999999999999999999999999999999999
Q ss_pred CCceeeeeceecCCCCcHHHHHHHHhcchhCCCcEEEECCCcchhhhhhhhcchHHHHHHhCChhhHHHHHHHhhcCCeE
Q 024923 81 DTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLT 160 (260)
Q Consensus 81 ~~~~vflGD~vdrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~ 160 (260)
.+++||||||||||++++|++.+++.+|..+|.++++||||||.+.++..+||..|+..+|+ ..+|..+.+.|..||++
T Consensus 86 ~~~ylfLGDyVDRG~~s~evl~ll~~lki~~p~~v~llRGNHE~~~~~~~ygF~~e~~~~y~-~~l~~~~~~~F~~LPla 164 (320)
T PTZ00480 86 ESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYT-IKLWKTFTDCFNCLPVA 164 (320)
T ss_pred cceEEEeceecCCCCCcHHHHHHHHHhcccCCCceEEEecccchhhhhhhcchHHHHHhhcC-HHHHHHHHHHHHhccHh
Confidence 99999999999999999999999999999999999999999999999999999999999995 67999999999999999
Q ss_pred EEEcCcEEEEcCCCCCCCCcHHHHhcccccccCCCCCCccccccCCCCC-CCCCCcCCCCCcEEEcCCchHHHHHHhhCC
Q 024923 161 ALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQVNTIALSFRHCMS 239 (260)
Q Consensus 161 ~~i~~~~l~vHgGi~~~~~~~~~~~~~~r~~~~~~~~~~~~llWsdp~~-~~~~~~~~rg~~~~fGh~h~~~~~f~~~n~ 239 (260)
++++++++|||||++|....+++++.+.|+.+.+.++.+.|+|||||.. ..+|.+++||.|++||.+ ++++||++|+
T Consensus 165 AiI~~~i~cvHGGI~p~~~~l~~i~~i~rp~~~~~~~~~~dllWSDP~~~~~~~~~s~RG~g~~FG~~--~~~~Fl~~n~ 242 (320)
T PTZ00480 165 ALIDEKILCMHGGLSPELSNLEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWADNERGVSYVFSQE--IVQVFLKKHE 242 (320)
T ss_pred heecCcEEEEcCCcCcccCCHHHHhcccCCCCCCccchhhheeecCcccccCCCccCCCCCccccCHH--HHHHHHHhCC
Confidence 9999999999999999999999999999999999999999999999986 578999999999999999 9999999999
Q ss_pred Ccchhhhhheeeeeecc
Q 024923 240 PIQKTVFVAYFLVVAGH 256 (260)
Q Consensus 240 ~i~~~i~~~~~~~~~gh 256 (260)
+ +. |++||+++-.|.
T Consensus 243 l-~~-IiR~Hq~v~~G~ 257 (320)
T PTZ00480 243 L-DL-ICRAHQVVEDGY 257 (320)
T ss_pred C-cE-EEEcCccccCce
Confidence 6 33 455555554443
No 7
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=100.00 E-value=4.1e-53 Score=378.56 Aligned_cols=240 Identities=43% Similarity=0.765 Sum_probs=220.4
Q ss_pred ccHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhcCCCcccccCceeEecCCCCCHHHHHHHHHHcCCCCCCceeeeecee
Q 024923 12 GNLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYV 91 (260)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vflGD~v 91 (260)
++++-++++++++..++++++.+||++|+++|++||++++++.+++||||||||+.+|.++|+..+.++.+++|||||||
T Consensus 1 ~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~e~~l~~i~~~i~ViGDIHG~~~dL~~l~~~~g~~~~~~ylFLGDyV 80 (305)
T cd07416 1 PRIDVLKAHFMREGRLSEEDALRIITEGAEILRQEPNLLRIEAPVTVCGDIHGQFYDLLKLFEVGGSPANTRYLFLGDYV 80 (305)
T ss_pred CCHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCeEccCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEECCcc
Confidence 36889999999999999999999999999999999999999999999999999999999999999998899999999999
Q ss_pred cCCCCcHHHHHHHHhcchhCCCcEEEECCCcchhhhhhhhcchHHHHHHhCChhhHHHHHHHhhcCCeEEEEcCcEEEEc
Q 024923 92 DRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLH 171 (260)
Q Consensus 92 drG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vH 171 (260)
|||++|.|++.+++++|..+|.++++||||||.+.++..++|..++..+| ....|..+.++|++||++++++++++|||
T Consensus 81 DRG~~s~Evi~lL~~lki~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~y-~~~l~~~~~~~f~~LPlaaii~~~i~~vH 159 (305)
T cd07416 81 DRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYDACMEAFDCLPLAALMNQQFLCVH 159 (305)
T ss_pred CCCCChHHHHHHHHHHHhhcCCCEEEEeCCCcHHHHHHhhCchhHHHHhc-cHHHHHHHHHHHhhccceeEEcCCEEEEc
Confidence 99999999999999999999999999999999999999999999999998 46788999999999999999999999999
Q ss_pred CCCCCCCCcHHHHhcccccccCCCCCCccccccCCCCCCC-------CCCcC-CCCCcEEEcCCchHHHHHHhhCCCcch
Q 024923 172 GGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRC-------GWGIS-PRGAGYTFGQVNTIALSFRHCMSPIQK 243 (260)
Q Consensus 172 gGi~~~~~~~~~~~~~~r~~~~~~~~~~~~llWsdp~~~~-------~~~~~-~rg~~~~fGh~h~~~~~f~~~n~~i~~ 243 (260)
||++|...++++++.++|+.+.+..+.++|++||||.... +|.++ +||.++.||.+ ++++||++|++ +.
T Consensus 160 GGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~~~Rg~g~~fG~~--~~~~Fl~~n~l-~~ 236 (305)
T cd07416 160 GGLSPELKTLDDIRKLDRFREPPAFGPMCDLLWSDPLEDFGNEKTQEHFVHNTVRGCSYFYSYR--AVCEFLQKNNL-LS 236 (305)
T ss_pred CCCCcccccHHHhcccCCCCCCCCCCcceeeeecCcccccccccccccccccCCCCCceecCHH--HHHHHHHHcCC-eE
Confidence 9999999999999999999999989999999999997521 36554 89999999999 99999999996 33
Q ss_pred hhhhheeeeeecc
Q 024923 244 TVFVAYFLVVAGH 256 (260)
Q Consensus 244 ~i~~~~~~~~~gh 256 (260)
|++||+++-.|.
T Consensus 237 -iiR~He~~~~G~ 248 (305)
T cd07416 237 -IIRAHEAQDAGY 248 (305)
T ss_pred -EEEeccccccce
Confidence 456666555554
No 8
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=100.00 E-value=1.1e-52 Score=373.43 Aligned_cols=238 Identities=38% Similarity=0.778 Sum_probs=218.0
Q ss_pred HHHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHhcCCCcccccCceeEecCCCCCHHHHHHHHHHcCCCCCCcee
Q 024923 14 LDEQIAQLMQCK--------PLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYL 85 (260)
Q Consensus 14 ~~~~~~~~~~~~--------~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~v 85 (260)
++++++++.+.. .++.+++.+||+++++++++||++++++.+++||||||||+.+|.++|+.+++++.++++
T Consensus 4 ~~~~i~~~~~~~~~~~~~~~~i~~~~i~~l~~~~~~il~~e~~ll~i~~p~~ViGDIHG~~~~L~~l~~~~~~~~~~~~l 83 (294)
T PTZ00244 4 VQTLIEKMLTVKGNRTQRQILIREEDIRAVLTEVREIFMSQPMLLEIRPPVRVCGDTHGQYYDLLRIFEKCGFPPYSNYL 83 (294)
T ss_pred HHHHHHHHHhcccCCCccccCCCHHHHHHHHHHHHHHHHhCCCeEeccCCceeeccCCCCHHHHHHHHHHcCCCCcccEE
Confidence 566777766543 688999999999999999999999999999999999999999999999999998888999
Q ss_pred eeeceecCCCCcHHHHHHHHhcchhCCCcEEEECCCcchhhhhhhhcchHHHHHHhCChhhHHHHHHHhhcCCeEEEEcC
Q 024923 86 FMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVES 165 (260)
Q Consensus 86 flGD~vdrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~ 165 (260)
|||||||||++|.|++.+++.+|..+|.+++++|||||.+.++..+||..++..+|+ ...|..+.++|+.||+++++++
T Consensus 84 fLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~y~-~~l~~~~~~~f~~lPlaaii~~ 162 (294)
T PTZ00244 84 FLGDYVDRGKHSVETITLQFCYKIVYPENFFLLRGNHECASINKMYGFFDDVKRRYN-IKLFKAFTDVFNTMPVCCVISE 162 (294)
T ss_pred EeeeEecCCCCHHHHHHHHHHHhhccCCeEEEEecccchHhHhhccChHHHHHHHhh-HHHHHHHHHHHHhCchheEecC
Confidence 999999999999999999999999999999999999999999999999999999995 6789999999999999999999
Q ss_pred cEEEEcCCCCCCCCcHHHHhcccccccCCCCCCccccccCCCCC-CCCCCcCCCCCcEEEcCCchHHHHHHhhCCCcchh
Q 024923 166 EIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQVNTIALSFRHCMSPIQKT 244 (260)
Q Consensus 166 ~~l~vHgGi~~~~~~~~~~~~~~r~~~~~~~~~~~~llWsdp~~-~~~~~~~~rg~~~~fGh~h~~~~~f~~~n~~i~~~ 244 (260)
+++|||||++|.+.++++++.++|+.+.+.++.+.|++||||.. ..+|.+++||.|++||.+ ++++||++|++ +.
T Consensus 163 ~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~--~~~~Fl~~n~l-~~- 238 (294)
T PTZ00244 163 KIICMHGGLSPDLTSLASVNEIERPCDVPDRGILCDLLWADPEDEVRGFLESDRGVSYLFGED--IVNDFLDMVDM-DL- 238 (294)
T ss_pred eeEEEcCCCCchhhHHHHhhhhccccCCCccchhheeeecCcccccCCCCcCCCCCccccCHH--HHHHHHHHcCC-cE-
Confidence 99999999999999999999999999988889999999999986 578999999999999999 99999999996 32
Q ss_pred hhhheeeeeecc
Q 024923 245 VFVAYFLVVAGH 256 (260)
Q Consensus 245 i~~~~~~~~~gh 256 (260)
|++||+++-.|.
T Consensus 239 iiR~Hq~~~~G~ 250 (294)
T PTZ00244 239 IVRAHQVMERGY 250 (294)
T ss_pred EEEcCccccCce
Confidence 455555554443
No 9
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=100.00 E-value=9.5e-53 Score=374.09 Aligned_cols=238 Identities=45% Similarity=0.934 Sum_probs=219.4
Q ss_pred HHHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHhcCCCcccccCceeEecCCCCCHHHHHHHHHHcCCCCCCcee
Q 024923 14 LDEQIAQLMQCK--------PLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYL 85 (260)
Q Consensus 14 ~~~~~~~~~~~~--------~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~v 85 (260)
++++++.+.+.. .++++++.+||++++++|++||++++++.+++||||||||+.+|.++|+..++++.+++|
T Consensus 2 ~~~~i~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~l~~~~~~~~~~~~l 81 (293)
T cd07414 2 IDSIIERLLEVRGSRPGKNVQLTEAEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYL 81 (293)
T ss_pred HHHHHHHHHhccccCCcccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCceEEEEecCCCHHHHHHHHHhcCCCCcceEE
Confidence 677788887655 689999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeceecCCCCcHHHHHHHHhcchhCCCcEEEECCCcchhhhhhhhcchHHHHHHhCChhhHHHHHHHhhcCCeEEEEcC
Q 024923 86 FMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVES 165 (260)
Q Consensus 86 flGD~vdrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~ 165 (260)
|||||||||++|+|++.+++++|..+|.++++||||||.+.++..+||..|+..+|+ ..+|..+.++|+.||+++++++
T Consensus 82 fLGDyVDRG~~s~e~i~ll~~lk~~~p~~i~llrGNHE~~~~~~~~gf~~e~~~~y~-~~l~~~~~~~f~~lPlaa~i~~ 160 (293)
T cd07414 82 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN-IKLWKTFTDCFNCLPVAAIIDE 160 (293)
T ss_pred EEeeEecCCCCcHHHHHHHHHhhhhCCCcEEEEecccchhhHhhhcchhhHHHHhhh-HHHHHHHHHHHHHhHHHHhhCC
Confidence 999999999999999999999999999999999999999999999999999999995 6789999999999999999999
Q ss_pred cEEEEcCCCCCCCCcHHHHhcccccccCCCCCCccccccCCCCC-CCCCCcCCCCCcEEEcCCchHHHHHHhhCCCcchh
Q 024923 166 EIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQVNTIALSFRHCMSPIQKT 244 (260)
Q Consensus 166 ~~l~vHgGi~~~~~~~~~~~~~~r~~~~~~~~~~~~llWsdp~~-~~~~~~~~rg~~~~fGh~h~~~~~f~~~n~~i~~~ 244 (260)
+++|||||++|...++++++.+.|+.+.+.++.+.+++||||.. ..+|.+++||.+++||.+ ++++||++|++ +.
T Consensus 161 ~i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~--~~~~Fl~~n~l-~~- 236 (293)
T cd07414 161 KIFCMHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGKD--VVAKFLNKHDL-DL- 236 (293)
T ss_pred cEEEEccCCCcccCcHHHHhcccCCCCCCchhhHhhhhccCcccccCCCccCCCCcceecCHH--HHHHHHHHcCC-eE-
Confidence 99999999999999999999999999988889999999999986 578999999999999999 99999999996 32
Q ss_pred hhhheeeeeecc
Q 024923 245 VFVAYFLVVAGH 256 (260)
Q Consensus 245 i~~~~~~~~~gh 256 (260)
|++||+++-.|.
T Consensus 237 iiR~He~~~~G~ 248 (293)
T cd07414 237 ICRAHQVVEDGY 248 (293)
T ss_pred EEECCccccCeE
Confidence 455555555443
No 10
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=100.00 E-value=2.6e-52 Score=374.38 Aligned_cols=242 Identities=34% Similarity=0.652 Sum_probs=220.1
Q ss_pred CcccHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhcCCCcccccCc----eeEecCCCCCHHHHHHHHHHcCCCCC-Cce
Q 024923 10 SHGNLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSP----VTICGDIHGQFHDLAELFRIGGKCPD-TNY 84 (260)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~----i~viGDIHG~~~~L~~ll~~~~~~~~-~~~ 84 (260)
....++++++.++++..++++++.+||++|.+++++||++++++.+ ++||||||||+.+|.++|+..++++. +++
T Consensus 12 ~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~il~~ep~l~~i~~p~~~~~~VvGDIHG~~~dL~~ll~~~g~~~~~~~y 91 (316)
T cd07417 12 TLEFVKEMIEWFKDQKKLHKKYAYQILLQVKELLKKLPSLVEITIPEGEKITVCGDTHGQFYDLLNIFELNGLPSETNPY 91 (316)
T ss_pred CHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCcceeccCCCCceeEEeecccCCHHHHHHHHHhcCCCCccCeE
Confidence 3456899999999999999999999999999999999999988644 99999999999999999999998765 569
Q ss_pred eeeeceecCCCCcHHHHHHHHhcchhCCCcEEEECCCcchhhhhhhhcchHHHHHHhCChhhHHHHHHHhhcCCeEEEEc
Q 024923 85 LFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVE 164 (260)
Q Consensus 85 vflGD~vdrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~ 164 (260)
||||||||||++|+|++.+++++|..+|.++++||||||.+.++..+||..|+..+|+ ..+|..+.++|+.||++++++
T Consensus 92 lFLGDyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~k~~-~~l~~~~~~~f~~LPlaaii~ 170 (316)
T cd07417 92 LFNGDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAKYN-EQMFDLFSEVFNWLPLAHLIN 170 (316)
T ss_pred EEEeeEecCCCChHHHHHHHHHhhhccCCceEEEeeccchHHHHHHhhhcchhhhccc-HHHHHHHHHHHHhchHhheeC
Confidence 9999999999999999999999999999999999999999999999999999999995 678899999999999999999
Q ss_pred CcEEEEcCCC-CCCCCcHHHHhcccccccCCCCCCccccccCCCCCCCCCCcCCCCCcEEEcCCchHHHHHHhhCCCcch
Q 024923 165 SEIFCLHGGL-SPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQVNTIALSFRHCMSPIQK 243 (260)
Q Consensus 165 ~~~l~vHgGi-~~~~~~~~~~~~~~r~~~~~~~~~~~~llWsdp~~~~~~~~~~rg~~~~fGh~h~~~~~f~~~n~~i~~ 243 (260)
++++|||||+ ++...++++++.++|+.+.+.++.+.|+|||||....+|.+++||.|+.||.+ ++++||++|++ +.
T Consensus 171 ~~~~~vHgGi~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~s~Rg~g~~fg~~--~~~~Fl~~n~l-~~ 247 (316)
T cd07417 171 GKVLVVHGGLFSDDGVTLDDIRKIDRFRQPPDSGLMCELLWSDPQPQPGRSPSKRGVGCQFGPD--VTKRFLEENNL-EY 247 (316)
T ss_pred CeEEEEccccccCCCccHHHhhcccCCCCCCccccceeeeecCCCCCCCCCccCCCCceEeCHH--HHHHHHHHcCC-cE
Confidence 9999999999 55678899999999999888889999999999998888999999999999999 99999999996 22
Q ss_pred hhhhheeeeeecc
Q 024923 244 TVFVAYFLVVAGH 256 (260)
Q Consensus 244 ~i~~~~~~~~~gh 256 (260)
|++||+++-.|.
T Consensus 248 -iiR~He~~~~G~ 259 (316)
T cd07417 248 -IIRSHEVKDEGY 259 (316)
T ss_pred -EEECCcccceeE
Confidence 456666655554
No 11
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=4.2e-52 Score=373.31 Aligned_cols=226 Identities=48% Similarity=0.954 Sum_probs=215.2
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCCcccccCceeEecCCCCCHHHHHHHHHHcC-CCCCCceeeeeceecCCCCcHHHHHHH
Q 024923 26 PLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGG-KCPDTNYLFMGDYVDRGYYSVETVTLL 104 (260)
Q Consensus 26 ~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~-~~~~~~~vflGD~vdrG~~s~evl~~l 104 (260)
.++++++.++|..+.+++.++|++++++.||.|+|||||++.+|.++++..| +++..+|||||||||||++|+|++.++
T Consensus 31 ~l~~~ei~~l~~~~~~if~~~~~l~e~~aPV~i~GDiHGq~~DLlrlf~~~g~~pp~~~ylFLGDYVDRG~~slE~i~LL 110 (331)
T KOG0374|consen 31 PLSKSEIIKLCDKAREIFLSQPTLLELSAPVKIVGDIHGQFGDLLRLFDLLGSFPPDQNYVFLGDYVDRGKQSLETICLL 110 (331)
T ss_pred eccHHHHHHHHHHHHHHhcCCCceeecCCCEEEEccCcCCHHHHHHHHHhcCCCCCcccEEEecccccCCccceEEeehh
Confidence 4889999999999999999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HhcchhCCCcEEEECCCcchhhhhhhhcchHHHHHHhCChhhHHHHHHHhhcCCeEEEEcCcEEEEcCCCCCCCCcHHHH
Q 024923 105 VSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNI 184 (260)
Q Consensus 105 ~~lk~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~~~~~~~~~~ 184 (260)
+++|..||++++++|||||.+.++..|||++|+..+|+....|..+.+.|..||++++++++++|+|||++|...+++++
T Consensus 111 ~a~Ki~yp~~~~lLRGNHE~~~in~~yGFydE~~rr~~~~~~w~~F~~~f~~mp~~a~i~~kI~CmhGGlsp~l~~~~~i 190 (331)
T KOG0374|consen 111 FALKIKYPENVFLLRGNHECASINRIYGFYDECKRRYGEIKLWKAFNDAFNCLPLAALIDGKILCMHGGLSPHLKSLDQI 190 (331)
T ss_pred hhhhhhCCceEEEeccccccccccceeeeHHHHHHhcchHHHHHHHHHHHhhCchhheecceEEEecCCCChhhcChHHH
Confidence 99999999999999999999999999999999999997678999999999999999999999999999999999999999
Q ss_pred hcccccccCCCCCCccccccCCCCC-CCCCCcCCCCCcEEEcCCchHHHHHHhhCCCcchhhhhheeeeeec
Q 024923 185 RNFDRVQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQVNTIALSFRHCMSPIQKTVFVAYFLVVAG 255 (260)
Q Consensus 185 ~~~~r~~~~~~~~~~~~llWsdp~~-~~~~~~~~rg~~~~fGh~h~~~~~f~~~n~~i~~~i~~~~~~~~~g 255 (260)
+.+.||.+.+..+.++|++|+||+. ..+|..+.||.+++||++ ++++||+++++ ++ |++||+++-.|
T Consensus 191 ~~i~rp~~~~~~gll~DLlWsdp~~~~~g~~~n~Rg~s~~fg~~--~v~~f~~~~~l-dl-ivRaHqvv~dG 258 (331)
T KOG0374|consen 191 RAIPRPTDSPDKGLLCDLLWSDPDDDVPGWEENDRGVSFTFGPA--VVEDFCKKLDL-DL-IVRAHQVVEDG 258 (331)
T ss_pred hhccCCcCCCccceeeeeeecCCCCCCCCcccCCCceeeEecHH--HHHHHHHHhCc-ce-EEEcCcccccc
Confidence 9999999999999999999999997 589999999999999999 99999999985 44 56777776655
No 12
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=100.00 E-value=2.9e-51 Score=361.65 Aligned_cols=225 Identities=49% Similarity=0.907 Sum_probs=208.3
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCcccccCceeEecCCCCCHHHHHHHHHHcCCCCCCceeeeeceecCCCCcHHHHHHHHh
Q 024923 27 LSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVS 106 (260)
Q Consensus 27 ~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vflGD~vdrG~~s~evl~~l~~ 106 (260)
++++++.+||++|+++|++||++++++++++||||||||+.+|.++|+..+.++.+.+||||||||||++|.|++.++++
T Consensus 1 ~~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~~s~e~l~~l~~ 80 (271)
T smart00156 1 LYAEEILELLREVKEIFRQEPNLVEVSAPVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVDRGPFSIEVILLLFA 80 (271)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCeEEeCCCEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccCCCCChHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999998899999999999999999999999999
Q ss_pred cchhCCCcEEEECCCcchhhhhhhhcchHHHHHHhCChhhHHHHHHHhhcCCeEEEEcCcEEEEcCCCCCCCCcHHHHhc
Q 024923 107 LKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRN 186 (260)
Q Consensus 107 lk~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~~~~~~~~~~~~ 186 (260)
++..+|.+++++|||||.+.++..+||..++..+|+ ..+|..+.++|+.||++++++++++|||||++|...++++++.
T Consensus 81 lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~-~~l~~~~~~~f~~LPl~aii~~~~~~vHgGi~~~~~~l~~i~~ 159 (271)
T smart00156 81 LKILYPNRVVLLRGNHESRSMNEIYGFYDECKRKYG-EEIYEKFQEAFSWLPLAALIDNKILCMHGGLSPDLTTLDDIRK 159 (271)
T ss_pred HHhcCCCCEEEEeccccHHHHHHhccchhhhhhhcC-HHHHHHHHHHHhhChhheEEcCeEEEEecCCCCccCCHHHHhc
Confidence 999999999999999999999999999999999995 6899999999999999999998999999999999999999999
Q ss_pred ccccccCCCCCCccccccCCCCC-CCCCCcCCCCCcEEEcCCchHHHHHHhhCCCcchhhhhheeeeeecc
Q 024923 187 FDRVQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQVNTIALSFRHCMSPIQKTVFVAYFLVVAGH 256 (260)
Q Consensus 187 ~~r~~~~~~~~~~~~llWsdp~~-~~~~~~~~rg~~~~fGh~h~~~~~f~~~n~~i~~~i~~~~~~~~~gh 256 (260)
+.|+.+.+.++.+.+++||||.. ..+|.+++||.++.||.+ ++++||++|++ +. |++||+++-.|+
T Consensus 160 i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~--~~~~Fl~~n~l-~~-iiR~He~~~~G~ 226 (271)
T smart00156 160 LKRPQEPPDEGLLIDLLWSDPDQPVDGFQPSIRGASYYFGPD--AVDEFLKKNNL-KL-IIRAHQVVDDGY 226 (271)
T ss_pred ccCCCCCCchhhhhheeecCCCcccCCCccCCCCCccccCHH--HHHHHHHHCCC-eE-EEecCcccCCcE
Confidence 99999888889999999999964 688999999999999999 99999999996 22 455555554443
No 13
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-52 Score=351.09 Aligned_cols=246 Identities=75% Similarity=1.261 Sum_probs=234.6
Q ss_pred CCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhcCCCcccccCceeEecCCCCCHHHHHHHHHHcCCCCCCcee
Q 024923 6 VPSNSHGNLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYL 85 (260)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~v 85 (260)
+++-....++.+|+.+.+++++++.++..+++.|+++|++|.++.+++.+++|+||+|||+++|.++++..|..|...++
T Consensus 12 ~~~~~i~~vd~~ie~L~~ck~lse~~v~~lc~~a~~~L~~e~nV~~v~~pvtvcGDvHGqf~dl~ELfkiGG~~pdtnyl 91 (319)
T KOG0371|consen 12 LATALILDVDPWIEQLYKCKPLSEVDVSSLCLLAKEILDKEENVQPVNCPVTVCGDVHGQFHDLIELFKIGGLAPDTNYL 91 (319)
T ss_pred cccccccccccchHHHHhcCCCccccchhHHHHHHHHHhccccccccccceEEecCcchhHHHHHHHHHccCCCCCccee
Confidence 34445567899999999999999999999999999999999999999999999999999999999999888888999999
Q ss_pred eeeceecCCCCcHHHHHHHHhcchhCCCcEEEECCCcchhhhhhhhcchHHHHHHhCChhhHHHHHHHhhcCCeEEEEcC
Q 024923 86 FMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVES 165 (260)
Q Consensus 86 flGD~vdrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~ 165 (260)
|+|||||||++|.|++.++.++|.+||+++.+||||||.+.+...|||++||+++||+..+|..+.+.|+.+|+.+.|++
T Consensus 92 fmGDyvdrGy~SvetVS~lva~Kvry~~rvtilrGNHEsrqitqvygfydeclRkyg~anvw~~Ftdlfdy~P~tali~~ 171 (319)
T KOG0371|consen 92 FMGDYVDRGYYSVETVSLLVALKVRYPDRVTILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIES 171 (319)
T ss_pred eeeeecccccchHHHHHHHHHhhccccceeEEecCchHHHHHHHHHhhHHHHHhhcccccchHHhhhhhhccchHhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEcCCCCCCCCcHHHHhcccccccCCCCCCccccccCCCCCCCCCCcCCCCCcEEEcCCchHHHHHHhhCCCcchhh
Q 024923 166 EIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQVNTIALSFRHCMSPIQKTV 245 (260)
Q Consensus 166 ~~l~vHgGi~~~~~~~~~~~~~~r~~~~~~~~~~~~llWsdp~~~~~~~~~~rg~~~~fGh~h~~~~~f~~~n~~i~~~i 245 (260)
+++|.|||++|+...+++++.+.|.+++|.+++++|+|||||+.+.+|..++||.++.||.+ ..+.|..+||+ ++ |
T Consensus 172 ~ifc~HGgLspsi~tld~~r~~dr~~evphegpmcDlLwsdpddr~gwg~sprgag~tfg~d--i~~~fn~~n~l-sl-i 247 (319)
T KOG0371|consen 172 KIFCLHGGLSPSIDTLDLIRLLDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQD--ISEQFNHKNGL-SL-I 247 (319)
T ss_pred ceeeccCCcCcccchHHHHHHHHHhhcccCCCChhheeccCcccCCCCCCCCCCCCcccchh--hHHHhhccCCc-hH-h
Confidence 99999999999999999999999999999999999999999999999999999999999999 99999999996 44 5
Q ss_pred hhheeeeeec
Q 024923 246 FVAYFLVVAG 255 (260)
Q Consensus 246 ~~~~~~~~~g 255 (260)
.++|+++-.|
T Consensus 248 sRahqlvm~g 257 (319)
T KOG0371|consen 248 SRAHQLVMEG 257 (319)
T ss_pred HHHHHHHhcc
Confidence 7888877665
No 14
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=100.00 E-value=2.1e-51 Score=360.89 Aligned_cols=242 Identities=41% Similarity=0.750 Sum_probs=227.1
Q ss_pred CCcccHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhcCCCcccccCceeEecCCCCCHHHHHHHHHHcCCCCCCceeeee
Q 024923 9 NSHGNLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMG 88 (260)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vflG 88 (260)
.+++..+-+-+++.+...++++..+.++.++..+|++|++++++..||.|+|||||+|.+|.++|+..|.+...+|+|||
T Consensus 43 ~gkP~~~~Lr~Hf~~EGrl~ee~alrIi~~~a~llr~Eknmi~v~APiTVCGDIHGQf~DLmKLFEVGG~PA~t~YLFLG 122 (517)
T KOG0375|consen 43 TGKPRHDVLRNHFIKEGRLEEEQALRIINEGAALLRQEKNMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLG 122 (517)
T ss_pred CCCcchHHHHHHHHhhcchhHHHHHHHHHHHHHHHhcCCceEeccCCeeEecccchHHHHHHHHHHccCCcccceeEeec
Confidence 67788899999999999999999999999999999999999999999999999999999999999999998899999999
Q ss_pred ceecCCCCcHHHHHHHHhcchhCCCcEEEECCCcchhhhhhhhcchHHHHHHhCChhhHHHHHHHhhcCCeEEEEcCcEE
Q 024923 89 DYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIF 168 (260)
Q Consensus 89 D~vdrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l 168 (260)
||||||..|+|++.+|.+||+.||..+++||||||.+.+...+.|..||..+| +..+|+.+++.|+.||+++..++.++
T Consensus 123 DYVDRGyFSiECvlYLwsLKi~yp~tl~lLRGNHECrHLT~YFTFKqEc~iKY-se~vYdaCmesFd~LPLAAlmNqQfl 201 (517)
T KOG0375|consen 123 DYVDRGYFSIECVLYLWSLKINYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYDACMESFDCLPLAALMNQQFL 201 (517)
T ss_pred cccccceeeeehHHHHHHHhcCCCCeEEEecCCcchhhhHhHhhHHHHHhHhc-cHHHHHHHHHHhccchHHHHhcCceE
Confidence 99999999999999999999999999999999999999999999999999999 68999999999999999999999999
Q ss_pred EEcCCCCCCCCcHHHHhcccccccCCCCCCccccccCCCCCC-------CCC-CcCCCCCcEEEcCCchHHHHHHhhCCC
Q 024923 169 CLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDR-------CGW-GISPRGAGYTFGQVNTIALSFRHCMSP 240 (260)
Q Consensus 169 ~vHgGi~~~~~~~~~~~~~~r~~~~~~~~~~~~llWsdp~~~-------~~~-~~~~rg~~~~fGh~h~~~~~f~~~n~~ 240 (260)
|||||++|...++++|+.++|+.++|..+++||+|||||.+. +.| .++.||+++.|... ++++|++.||+
T Consensus 202 CVHGGlSPEi~tl~DIr~l~RF~EpPa~GpmCDLLWsDPlEdfgnek~~e~f~hNsvRGCSyfysy~--A~C~FLq~nnL 279 (517)
T KOG0375|consen 202 CVHGGLSPEIHTLDDIRKLDRFKEPPAFGPMCDLLWSDPLEDFGNEKTSEHFTHNSVRGCSYFYSYP--AVCEFLQNNNL 279 (517)
T ss_pred EecCCCCcccccHHHHHhhhhccCCCccCcchhhhccChhhhccccccccccccCccccccceechH--HHHHHHHhCCc
Confidence 999999999999999999999999999999999999999752 234 34579999999999 99999999999
Q ss_pred cchhhhhheeeeeec
Q 024923 241 IQKTVFVAYFLVVAG 255 (260)
Q Consensus 241 i~~~i~~~~~~~~~g 255 (260)
+++ +++|..-=.|
T Consensus 280 LSI--iRAHEAQDaG 292 (517)
T KOG0375|consen 280 LSI--IRAHEAQDAG 292 (517)
T ss_pred hhh--hhhhhhhhhh
Confidence 987 7777654333
No 15
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=100.00 E-value=2.1e-50 Score=366.82 Aligned_cols=229 Identities=34% Similarity=0.558 Sum_probs=205.8
Q ss_pred CcccHHHHHHHHhcC----------CCCCHHHHHHHHHHHHHHHhcCCCccccc----CceeEecCCCCCHHHHHHHHHH
Q 024923 10 SHGNLDEQIAQLMQC----------KPLSEQEVRVLCEKAKEILMDESNVQPVK----SPVTICGDIHGQFHDLAELFRI 75 (260)
Q Consensus 10 ~~~~~~~~~~~~~~~----------~~~~~~~~~~l~~~~~~~~~~e~~~~~~~----~~i~viGDIHG~~~~L~~ll~~ 75 (260)
+.+.+++|++.++.. ..++.+++.+||++|+++|++||++++++ .+++||||||||+.+|.++|+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~a~~il~~ep~ll~i~~~~~~~i~VvGDIHG~~~dL~~ll~~ 87 (377)
T cd07418 8 TNEWVHELMSVFEWSSRNLPPSELPSVLPVNVFDSLVLTAHKILHREPNCVRIDVEDVCEVVVVGDVHGQLHDVLFLLED 87 (377)
T ss_pred CHHHHHHHHHHHHhcccccCchhhccCCCHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCEEEEEecCCCHHHHHHHHHH
Confidence 345788999999766 45789999999999999999999999987 7999999999999999999999
Q ss_pred cCCCCC-CceeeeeceecCCCCcHHHHHHHHhcchhCCCcEEEECCCcchhhhhhhhcchHHHHHHhCC--hhhHHHHHH
Q 024923 76 GGKCPD-TNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGN--ANVWKIFTD 152 (260)
Q Consensus 76 ~~~~~~-~~~vflGD~vdrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~--~~~~~~~~~ 152 (260)
.++++. +.+||||||||||++|+|++.+++.++..+|.++++||||||.+.++..+||..++..+|+. ..+|+.+.+
T Consensus 88 ~g~~~~~~~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~~v~lLRGNHE~~~i~~~~Gf~~E~~~~y~~~~~~l~~~~~~ 167 (377)
T cd07418 88 AGFPDQNRFYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCTSMYGFEQEVLTKYGDKGKHVYRKCLG 167 (377)
T ss_pred hCCCCCCceEEEeccccCCCCChHHHHHHHHHHhhccCCeEEEEeeecccccchhhcccchhhhhhcCchHHHHHHHHHH
Confidence 998765 45999999999999999999999999999999999999999999999999999999999975 368999999
Q ss_pred HhhcCCeEEEEcCcEEEEcCCCC---------------------------CCCCcHHHHhccccc-ccCCCCC---Cccc
Q 024923 153 LFDYFPLTALVESEIFCLHGGLS---------------------------PSIETLDNIRNFDRV-QEVPHEG---PMCD 201 (260)
Q Consensus 153 ~~~~lP~~~~i~~~~l~vHgGi~---------------------------~~~~~~~~~~~~~r~-~~~~~~~---~~~~ 201 (260)
||++||++++++++++|||||++ |...++++++.++|+ .+++.++ .++|
T Consensus 168 ~f~~LPlaavI~~~i~cvHGGI~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~r~~~~~~~~~~~~i~~d 247 (377)
T cd07418 168 CFEGLPLASIIAGRVYTAHGGLFRSPSLPKRKKQKGKNRRVLLLEPESESLKLGTLDDLMKARRSVLDPPGEGSNLIPGD 247 (377)
T ss_pred HHHhCCcEEEECCCEEEECCCcCCcccccccccccccccccccccccccCCCCCCHHHHhhCCCCCCCCCCCCcccccee
Confidence 99999999999999999999994 345688999999886 4555554 3689
Q ss_pred cccCCCCCCCCCCcC-CCCCcEEEcCCchHHHHHHhhCCC
Q 024923 202 LLWSDPDDRCGWGIS-PRGAGYTFGQVNTIALSFRHCMSP 240 (260)
Q Consensus 202 llWsdp~~~~~~~~~-~rg~~~~fGh~h~~~~~f~~~n~~ 240 (260)
+|||||....+|.++ .||.|++||.+ ++++||++|++
T Consensus 248 lLWSDP~~~~g~~~~~~RG~g~~FG~~--~~~~FL~~n~l 285 (377)
T cd07418 248 VLWSDPSLTPGLSPNKQRGIGLLWGPD--CTEEFLEKNNL 285 (377)
T ss_pred eEeeCCccCCCCCccCCCCCccccCHH--HHHHHHHHcCC
Confidence 999999987777765 79999999999 99999999997
No 16
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=100.00 E-value=1.6e-48 Score=350.27 Aligned_cols=229 Identities=39% Similarity=0.719 Sum_probs=203.2
Q ss_pred CCCCHHHHHHHHHHHHHHHhcCCCcccccCceeEecCCCCCHHHHHHHHHHcCCCCC--------CceeeeeceecCCCC
Q 024923 25 KPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPD--------TNYLFMGDYVDRGYY 96 (260)
Q Consensus 25 ~~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~--------~~~vflGD~vdrG~~ 96 (260)
..++++++.+||++|+++|++||++++++.+++||||||||+.+|.++|+.+++++. .++|||||||||||+
T Consensus 19 ~~~~~~~i~~l~~~~~~il~~e~~~~~i~~~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~~~~~~~vfLGDyVDRGp~ 98 (311)
T cd07419 19 FFFNWNEILELCDAAEDIFKQEPMVLRLRAPIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGDIEYIDYLFLGDYVDRGSN 98 (311)
T ss_pred cCCCHHHHHHHHHHHHHHHHhCCCeEeeCCCEEEEEeccCCHHHHHHHHHHcCCCcccccCCCcCceEEEECCccCCCCC
Confidence 357899999999999999999999999999999999999999999999999987643 479999999999999
Q ss_pred cHHHHHHHHhcchhCCCcEEEECCCcchhhhhhhhcchHHHHHHhCC-----hhhHHHHHHHhhcCCeEEEEcCcEEEEc
Q 024923 97 SVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGN-----ANVWKIFTDLFDYFPLTALVESEIFCLH 171 (260)
Q Consensus 97 s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~-----~~~~~~~~~~~~~lP~~~~i~~~~l~vH 171 (260)
|+|++.++++++..+|.++++||||||.+.++..+||..++..+|+. ...|..+.++|+.||++++++++++|||
T Consensus 99 s~evl~ll~~lk~~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~f~~LPl~avi~~~~l~vH 178 (311)
T cd07419 99 SLETICLLLALKVKYPNQIHLIRGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRLFEWLPLAAIIEDKILCMH 178 (311)
T ss_pred hHHHHHHHHHhhhcCCCcEEEeccccchHHHHHHhcccHHHHHhcCccchhhHHHHHHHHHHHHhCchhheecccEEEEc
Confidence 99999999999999999999999999999999999999999988875 3588999999999999999899999999
Q ss_pred CCCCCCCCcHHHHhcccccc-cCCCCCCccccccCCCCCC---CCCCcCC---CCCc--EEEcCCchHHHHHHhhCCCcc
Q 024923 172 GGLSPSIETLDNIRNFDRVQ-EVPHEGPMCDLLWSDPDDR---CGWGISP---RGAG--YTFGQVNTIALSFRHCMSPIQ 242 (260)
Q Consensus 172 gGi~~~~~~~~~~~~~~r~~-~~~~~~~~~~llWsdp~~~---~~~~~~~---rg~~--~~fGh~h~~~~~f~~~n~~i~ 242 (260)
||++|...++++++.+.|+. ..+.++.+.+++||||... .+|.+++ ||.| +.||.+ ++++||++|++ +
T Consensus 179 gGi~p~~~~l~~i~~i~r~~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~rg~g~~~~fg~~--~~~~Fl~~n~l-~ 255 (311)
T cd07419 179 GGIGRSINHVSEIEDLKRPLTMEFGEQVVMDLLWSDPTENDSVLGLRPNAIDPRGPGLIVKFGPD--RVHRFLEENDL-Q 255 (311)
T ss_pred cCCCCCCCcHHHHhhcCCCCCCCCCCcceeeeeccCccccccccccccCCCCCCCCCcceeECHH--HHHHHHHHCCC-e
Confidence 99999999999999999986 4455677899999999863 4666665 8888 799999 99999999996 2
Q ss_pred hhhhhheeeeeeccc
Q 024923 243 KTVFVAYFLVVAGHI 257 (260)
Q Consensus 243 ~~i~~~~~~~~~gh~ 257 (260)
. |++||+++-.|.+
T Consensus 256 ~-iiRgHe~~~~G~~ 269 (311)
T cd07419 256 M-IIRAHECVMDGFE 269 (311)
T ss_pred E-EEEechhhhCCeE
Confidence 2 4566665555543
No 17
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-39 Score=292.16 Aligned_cols=228 Identities=30% Similarity=0.578 Sum_probs=198.3
Q ss_pred CcccHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhcCCCcccc----cCceeEecCCCCCHHHHHHHHHHcCCCCC-Cce
Q 024923 10 SHGNLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPV----KSPVTICGDIHGQFHDLAELFRIGGKCPD-TNY 84 (260)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~~~~----~~~i~viGDIHG~~~~L~~ll~~~~~~~~-~~~ 84 (260)
++.+++.+||.|+..+.+.+..++.++.+|++.|++.|++-++ +..+.|+||+||.+++|.-+|.+-|+|.. ..|
T Consensus 117 ~~~~i~~lieaFk~kq~LH~kYVl~iL~EakK~lkqmPnis~isTs~S~qVTiCGDLHGklDDL~~I~yKNGlPS~~npY 196 (631)
T KOG0377|consen 117 RKNHIDLLIEAFKKKQRLHPKYVLLILREAKKSLKQMPNISRISTSVSQQVTICGDLHGKLDDLLVILYKNGLPSSSNPY 196 (631)
T ss_pred CchHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHhCCCCCccccccccceEEeccccccccceEEEEecCCCCCCCCCe
Confidence 4568999999999999999999999999999999999999775 45799999999999999999999998765 569
Q ss_pred eeeeceecCCCCcHHHHHHHHhcchhCCCcEEEECCCcchhhhhhhhcchHHHHHHhCC--hhhHHHHHHHhhcCCeEEE
Q 024923 85 LFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGN--ANVWKIFTDLFDYFPLTAL 162 (260)
Q Consensus 85 vflGD~vdrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~--~~~~~~~~~~~~~lP~~~~ 162 (260)
||.||+||||.+|+|+|..|+.+-..+|..+++-|||||+.++|..|||.+|...+|.. ..+.+.+.+++..||++.+
T Consensus 197 vFNGDFVDRGk~siEvLmiL~a~~lv~P~~~~LNRGNHED~mmNlRYGF~kEv~~KYk~~~k~Ilr~leevy~WLPi~ti 276 (631)
T KOG0377|consen 197 VFNGDFVDRGKRSIEVLMILFALYLVYPNAVHLNRGNHEDHMMNLRYGFIKEVESKYKRHGKRILRFLEEVYRWLPIGTI 276 (631)
T ss_pred eecCchhhccccchhhHHHHHHHHhcCchhhhccCCchHHHHHHHHHhHHHHHHHHhhhcccHHHHHHHHHHHhcchhhh
Confidence 99999999999999999999999999999999999999999999999999999999973 5678889999999999999
Q ss_pred EcCcEEEEcCCCCCCCCcHHHHhcccccc-----cCCC-----------------CCCccccccCCCCCCCCC-CcCCCC
Q 024923 163 VESEIFCLHGGLSPSIETLDNIRNFDRVQ-----EVPH-----------------EGPMCDLLWSDPDDRCGW-GISPRG 219 (260)
Q Consensus 163 i~~~~l~vHgGi~~~~~~~~~~~~~~r~~-----~~~~-----------------~~~~~~llWsdp~~~~~~-~~~~rg 219 (260)
++.++++||||++... .++-+.++.|-. -+|. ...+.|++||||....|. .+.-||
T Consensus 277 id~~ilvvHGGiSd~T-dl~ll~kIeR~k~~Svlrpp~ek~~d~e~~s~~vg~dEW~Qi~DImWSDP~~~~GC~pNt~RG 355 (631)
T KOG0377|consen 277 IDSRILVVHGGISDST-DLDLLDKIERGKYVSVLRPPTEKGRDGEKLSKAVGVDEWQQIFDIMWSDPQATMGCVPNTLRG 355 (631)
T ss_pred cccceEEEecCcccch-hHHHHhhhhccceeEEecCCcccCccCCchhhhcChHHHHHHHHHHhcCcccccCCCcccccC
Confidence 9999999999997653 455555543321 1111 113579999999986664 455799
Q ss_pred CcEEEcCCchHHHHHHhhCCC
Q 024923 220 AGYTFGQVNTIALSFRHCMSP 240 (260)
Q Consensus 220 ~~~~fGh~h~~~~~f~~~n~~ 240 (260)
.|++||.+ +|..|+++.++
T Consensus 356 gG~yFGpD--vT~~~Lqk~~l 374 (631)
T KOG0377|consen 356 GGCYFGPD--VTDNFLQKHRL 374 (631)
T ss_pred CcceeCch--HHHHHHHHhCc
Confidence 99999999 99999999986
No 18
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=99.98 E-value=1.5e-32 Score=251.38 Aligned_cols=235 Identities=35% Similarity=0.672 Sum_probs=210.9
Q ss_pred ccHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhcCCCcccc----cCceeEecCCCCCHHHHHHHHHHcCCCCC-Cceee
Q 024923 12 GNLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPV----KSPVTICGDIHGQFHDLAELFRIGGKCPD-TNYLF 86 (260)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~~~~----~~~i~viGDIHG~~~~L~~ll~~~~~~~~-~~~vf 86 (260)
+.+..+++.+.+.+.++..-+-+|+..+..++.+++++++. ..++.|+||+||++.++.+++...|.++. ..++|
T Consensus 168 e~vk~~~~~~~~~~~L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~ylf 247 (476)
T KOG0376|consen 168 EFVKTLMEVFKNQKKLPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNPYLF 247 (476)
T ss_pred HHHHHHHHhhhcccccccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCcccccc
Confidence 34567777778888899999999999999999999999876 45799999999999999999999987764 67999
Q ss_pred eeceecCCCCcHHHHHHHHhcchhCCCcEEEECCCcchhhhhhhhcchHHHHHHhCChhhHHHHHHHhhcCCeEEEEcCc
Q 024923 87 MGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESE 166 (260)
Q Consensus 87 lGD~vdrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~ 166 (260)
.||++|||..|.|+...+...+..+|++++++|||||...++..|||..++..+|. +..+..+.+.|..||++..++++
T Consensus 248 ngdfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~kyt-e~~~~~f~~~f~~LPl~~~i~~~ 326 (476)
T KOG0376|consen 248 NGDFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKYT-EEMFNLFSEVFIWLPLAHLINNK 326 (476)
T ss_pred cCceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhhhH-HHHHHhhhhhhccccchhhhcCc
Confidence 99999999999999999999999999999999999999999999999999999995 55666666999999999999999
Q ss_pred EEEEcCCCC-CCCCcHHHHhcccccccCCCCCCccccccCCCCCCCCCCcCCCCCcEEEcCCchHHHHHHhhCCCcchhh
Q 024923 167 IFCLHGGLS-PSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQVNTIALSFRHCMSPIQKTV 245 (260)
Q Consensus 167 ~l~vHgGi~-~~~~~~~~~~~~~r~~~~~~~~~~~~llWsdp~~~~~~~~~~rg~~~~fGh~h~~~~~f~~~n~~i~~~i 245 (260)
++.+|||+. +....+++++++.|+..++.++.+++++||||....+..++.||.|..||.+ ++.+||+.|++ +. |
T Consensus 327 ~~~~hgglf~~~~v~l~d~r~i~r~~~~~~~~~~~~~lws~pq~~~g~s~S~r~~g~~fG~d--~t~~f~~~n~l-~~-i 402 (476)
T KOG0376|consen 327 VLVMHGGLFSPDGVTLEDFRNIDRFEQPPEEGLMCELLWSDPQPANGRSPSKRGVGLQFGPD--VTERFLQDNNL-DK-I 402 (476)
T ss_pred eEEEecCcCCCCCccHHHHHhhhhccCCcccccccccccCCCccccCCCccccCceeeeCCC--chhhHHhhcch-HH-H
Confidence 999999984 4445799999999999999999999999999999999999999999999999 99999999996 33 4
Q ss_pred hhheee
Q 024923 246 FVAYFL 251 (260)
Q Consensus 246 ~~~~~~ 251 (260)
+++|.+
T Consensus 403 ~rshe~ 408 (476)
T KOG0376|consen 403 IRSHEV 408 (476)
T ss_pred hhcccc
Confidence 566554
No 19
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=99.97 E-value=1.3e-29 Score=217.40 Aligned_cols=148 Identities=45% Similarity=0.829 Sum_probs=121.7
Q ss_pred eEecCCCCCHHHHHHHHHHcCCCCCCceeeeeceecCCCCcHHHHHHHHhcchhCCCcEEEECCCcchhhhhhhhcchHH
Q 024923 57 TICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 136 (260)
Q Consensus 57 ~viGDIHG~~~~L~~ll~~~~~~~~~~~vflGD~vdrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~~~~e 136 (260)
+||||||||+++|.++++.++..+.+.+||+||+||||+.+.+++.++.+++.. |.++++|+||||.+.++...++..+
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdrg~~~~~~l~~l~~~~~~-~~~~~~l~GNHe~~~~~~~~~~~~~ 79 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDRGPDSVEVIDLLLALKIL-PDNVILLRGNHEDMLLNFLYGFYDE 79 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCCCCCcHHHHHHHHHhcCC-CCcEEEEccCchhhhhhhhcCCcch
Confidence 589999999999999999999888899999999999999999999999999876 7789999999999988766554432
Q ss_pred H--------HHHhCChhhHHHHHHHhhcCCeEEEEcC-cEEEEcCCCCCCCCcHHHHhcccccccCCCCCCccccccCCC
Q 024923 137 C--------LRKYGNANVWKIFTDLFDYFPLTALVES-EIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDP 207 (260)
Q Consensus 137 ~--------~~~~~~~~~~~~~~~~~~~lP~~~~i~~-~~l~vHgGi~~~~~~~~~~~~~~r~~~~~~~~~~~~llWsdp 207 (260)
. ...+.....+..+.+|+..||+++.++. +++|||||++|..+...+.. ..+.+....+++|++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vHag~~~~~~~~~~~~------~~~~~~~~~~~lw~r~ 153 (225)
T cd00144 80 DEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALIETKKVLCVHGGLSPGLPLEEQIK------EEPEDQLPEDLLWSDP 153 (225)
T ss_pred hhccchhHHHHHhhCHHHHHHHHHHHHhCcHheEeCCCeEEEEeCCCCCccchHHhhh------cCcccccceeeeecCC
Confidence 2 2333345677888899999999998876 99999999999886555443 2334455789999998
Q ss_pred CCCC
Q 024923 208 DDRC 211 (260)
Q Consensus 208 ~~~~ 211 (260)
....
T Consensus 154 ~~~~ 157 (225)
T cd00144 154 LELP 157 (225)
T ss_pred CCCC
Confidence 8643
No 20
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=99.96 E-value=1.6e-29 Score=220.59 Aligned_cols=177 Identities=20% Similarity=0.328 Sum_probs=122.9
Q ss_pred CceeEecCCCCCHHHHHHHHHHcCCC---------CCCceeeeeceecCCCCcHHHHHHHHhcchhCCCcEEEECCCcch
Q 024923 54 SPVTICGDIHGQFHDLAELFRIGGKC---------PDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHES 124 (260)
Q Consensus 54 ~~i~viGDIHG~~~~L~~ll~~~~~~---------~~~~~vflGD~vdrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~ 124 (260)
++++||||||||++.|.++|+++++. +.+++||+||||||||+|.+|+++++++. .+.++++|+||||.
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~--~~~~~~~l~GNHE~ 78 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELV--EKKAAYYVPGNHCN 78 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHh--hCCCEEEEeCccHH
Confidence 57899999999999999999998874 45789999999999999999999999885 34579999999999
Q ss_pred hhhhhhhc-------chHHHHHHhCC------hhhHHHHHHHhhcCCeEEEEc-CcEEEEcCCCCCCCC--cHHHHhccc
Q 024923 125 RQITQVYG-------FYDECLRKYGN------ANVWKIFTDLFDYFPLTALVE-SEIFCLHGGLSPSIE--TLDNIRNFD 188 (260)
Q Consensus 125 ~~~~~~~~-------~~~e~~~~~~~------~~~~~~~~~~~~~lP~~~~i~-~~~l~vHgGi~~~~~--~~~~~~~~~ 188 (260)
++++...+ ...+++.+|.. ..+.+.+.+|++++|++..++ ++++|||||++|... ...++....
T Consensus 79 ~~l~~~~~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~~~~vHAG~~~~~~~~~~~~~~~~~ 158 (245)
T PRK13625 79 KLYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITLYEQAPLYHILDEGRLVVAHAGIRQDYIGRQDKKVQTFV 158 (245)
T ss_pred HHHHHHhCCCccccchhHhHHHHHhccChhhHHHHHHHHHHHHHhCCceEEEeCCCEEEEECCCChHhcccchhhhhhHH
Confidence 98875432 12345555532 235567889999999998764 679999999987631 111111000
Q ss_pred ccccCCCCCCccccccCCCCC-CCCCCcCCCCCc-EEEcCCchHHHHHHhhCCC
Q 024923 189 RVQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAG-YTFGQVNTIALSFRHCMSP 240 (260)
Q Consensus 189 r~~~~~~~~~~~~llWsdp~~-~~~~~~~~rg~~-~~fGh~h~~~~~f~~~n~~ 240 (260)
. .+....-.|+++.. +..|..+.+|.. ++|||+ ++......++.
T Consensus 159 l------~~~~~~~~~~~~~~~~~~~~~~~~g~~~vV~GHt--p~~~~~~~~~~ 204 (245)
T PRK13625 159 L------YGDITGEKHPDGSPVRRDWAKEYKGTAWIVYGHT--PVKEPRFVNHT 204 (245)
T ss_pred h------hccccCCcCCCCCeeeeccchhcCCCcEEEECCC--CCccceecCCe
Confidence 0 00011222333332 345666555654 789999 87755554443
No 21
>PHA02239 putative protein phosphatase
Probab=99.95 E-value=1.4e-27 Score=206.67 Aligned_cols=156 Identities=22% Similarity=0.356 Sum_probs=118.5
Q ss_pred CceeEecCCCCCHHHHHHHHHHcCCC--CCCceeeeeceecCCCCcHHHHHHHHhcchhCCCcEEEECCCcchhhhhhhh
Q 024923 54 SPVTICGDIHGQFHDLAELFRIGGKC--PDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVY 131 (260)
Q Consensus 54 ~~i~viGDIHG~~~~L~~ll~~~~~~--~~~~~vflGD~vdrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~ 131 (260)
|++++|||||||++.|.++++.+... +.+.+||+|||||||++|.++++.++++.. .+.++++|+||||.++++...
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s~~v~~~l~~~~~-~~~~~~~l~GNHE~~~l~~~~ 79 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKRSKDVVNYIFDLMS-NDDNVVTLLGNHDDEFYNIME 79 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCChHHHHHHHHHHhh-cCCCeEEEECCcHHHHHHHHh
Confidence 57899999999999999999988543 467899999999999999999999998753 345799999999999765321
Q ss_pred ----------cc----hHHHHHHhCCh------------------------------hhHHHHHHHhhcCCeEEEEcCcE
Q 024923 132 ----------GF----YDECLRKYGNA------------------------------NVWKIFTDLFDYFPLTALVESEI 167 (260)
Q Consensus 132 ----------~~----~~e~~~~~~~~------------------------------~~~~~~~~~~~~lP~~~~i~~~~ 167 (260)
.| ..+++.+|+.. ..+..+..|+++||++... +++
T Consensus 80 ~~~~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~~~-~~~ 158 (235)
T PHA02239 80 NVDRLSIYDIEWLSRYCIETLNSYGVSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYYKE-DKY 158 (235)
T ss_pred CchhcccchHHHHHcCCHHHHHHcCCCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceEEE-CCE
Confidence 11 14566777521 0123456699999999985 789
Q ss_pred EEEcCCCCCCCCcHHHHhcccccccCCCCCCccccccCCCCCCCCCCcCCCCCcEEEcCCchHHH
Q 024923 168 FCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQVNTIAL 232 (260)
Q Consensus 168 l~vHgGi~~~~~~~~~~~~~~r~~~~~~~~~~~~llWsdp~~~~~~~~~~rg~~~~fGh~h~~~~ 232 (260)
+|||||+.|..+..+|. ..+++|.++ |.....|..++|||| ++.
T Consensus 159 ifVHAGi~p~~~~~~q~--------------~~~llWiR~-----f~~~~~g~~vV~GHT--p~~ 202 (235)
T PHA02239 159 IFSHSGGVSWKPVEEQT--------------IDQLIWSRD-----FQPRKDGFTYVCGHT--PTD 202 (235)
T ss_pred EEEeCCCCCCCChhhCC--------------HhHeEEecc-----cCCCCCCcEEEECCC--CCC
Confidence 99999999987644442 278999965 233344666899999 774
No 22
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=99.95 E-value=1.4e-27 Score=206.90 Aligned_cols=123 Identities=24% Similarity=0.461 Sum_probs=98.6
Q ss_pred CceeEecCCCCCHHHHHHHHHHcCCCC----------CCceeeeeceecCCCCcHHHHHHHHhcchhCCCcEEEECCCcc
Q 024923 54 SPVTICGDIHGQFHDLAELFRIGGKCP----------DTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHE 123 (260)
Q Consensus 54 ~~i~viGDIHG~~~~L~~ll~~~~~~~----------~~~~vflGD~vdrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE 123 (260)
+|+.||||||||+.+|.++|+++++.+ .+++|||||||||||+|.+|++++++++.. .++++|+||||
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~~--~~~~~v~GNHE 78 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVAA--GAALCVPGNHD 78 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhhC--CcEEEEECCcH
Confidence 589999999999999999999997753 468999999999999999999999998643 46999999999
Q ss_pred hhhhhhhhcc-------hHHHHHHhC--ChhhHHHHHHHhhcCCeEEEEc-CcEEEEcCCCCCCC
Q 024923 124 SRQITQVYGF-------YDECLRKYG--NANVWKIFTDLFDYFPLTALVE-SEIFCLHGGLSPSI 178 (260)
Q Consensus 124 ~~~~~~~~~~-------~~e~~~~~~--~~~~~~~~~~~~~~lP~~~~i~-~~~l~vHgGi~~~~ 178 (260)
.++++...+. ..++..++. .....+...+|+++||+...++ ++++|||||+++..
T Consensus 79 ~~l~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHag~~~~~ 143 (234)
T cd07423 79 NKLYRKLQGRNVKITHGLEETVAQLEAESEEFKEEVIEFYESLPSHLVLDEGKLVVAHAGIKEEM 143 (234)
T ss_pred HHHHHHhcCCCccccCcccchHHHHhhccHHHHHHHHHHHHhCCcEEEeCCCcEEEEeCCCChHh
Confidence 9987654321 123344443 2345677889999999988765 57999999987653
No 23
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=99.95 E-value=1.8e-27 Score=204.73 Aligned_cols=116 Identities=24% Similarity=0.372 Sum_probs=93.8
Q ss_pred eEecCCCCCHHHHHHHHHHcCCC--------CCCceeeeeceecCCCCcHHHHHHHHhcchhCCCcEEEECCCcchhhhh
Q 024923 57 TICGDIHGQFHDLAELFRIGGKC--------PDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQIT 128 (260)
Q Consensus 57 ~viGDIHG~~~~L~~ll~~~~~~--------~~~~~vflGD~vdrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~ 128 (260)
+||||||||++.|.++|+++++. +.+.+|||||||||||+|.+|+++++++... .++++|+||||.+++.
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~~~--~~~~~l~GNHE~~ll~ 79 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMVDA--GHALAVMGNHEFNAIA 79 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhhcC--CCEEEEEccCcHHHHH
Confidence 79999999999999999999875 4678999999999999999999999998643 4799999999999875
Q ss_pred hhhc------ch-----------HHHHHHhC-ChhhHHHHHHHhhcCCeEEEEcCcEEEEcCCCC
Q 024923 129 QVYG------FY-----------DECLRKYG-NANVWKIFTDLFDYFPLTALVESEIFCLHGGLS 175 (260)
Q Consensus 129 ~~~~------~~-----------~e~~~~~~-~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~ 175 (260)
...+ |. .++.++++ .+...+...+|+++||++... ++++|||||++
T Consensus 80 ~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~lP~~~~~-~~~~~VHAg~~ 143 (222)
T cd07413 80 WHTKDPSGGEWLRAHSKKNLRQHQAFLEQFREHSEEHKDWLEWFKTLPLFLDL-GGVRVVHACWD 143 (222)
T ss_pred hhhCCcccchhhhcCCCcccccHHHHHHHHhccchhHHHHHHHHhcCCcEEEE-CCEEEEECCcC
Confidence 4322 10 13344443 234557789999999999875 68999999985
No 24
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=99.95 E-value=3.4e-28 Score=213.44 Aligned_cols=187 Identities=19% Similarity=0.231 Sum_probs=126.8
Q ss_pred CceeEecCCCCCHHHHHHHHHHcCCCC-CCceeeeeceecCCCCcHHHHHHHHhcchhCCCcEEEECCCcchhhhhhhhc
Q 024923 54 SPVTICGDIHGQFHDLAELFRIGGKCP-DTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYG 132 (260)
Q Consensus 54 ~~i~viGDIHG~~~~L~~ll~~~~~~~-~~~~vflGD~vdrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~ 132 (260)
|+++||||||||+++|.++|+++++.+ .+.++|+||+|||||+|.+|++++.++. .++++|+||||.++++..++
T Consensus 1 m~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~slevL~~l~~l~----~~~~~VlGNHD~~lL~~~~g 76 (279)
T TIGR00668 1 MATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGPGSLEVLRYVKSLG----DAVRLVLGNHDLHLLAVFAG 76 (279)
T ss_pred CcEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHHHHHHHHHhcC----CCeEEEEChhHHHHHHHhcC
Confidence 468999999999999999999999764 6788999999999999999999999885 35889999999999887766
Q ss_pred ch----HHHHHHhCChhhHHHHHHHhhcCCeEEEEc-CcEEEEcCCCCCCCCcHHHHhcccccccCCCCCCccccccCCC
Q 024923 133 FY----DECLRKYGNANVWKIFTDLFDYFPLTALVE-SEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDP 207 (260)
Q Consensus 133 ~~----~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~-~~~l~vHgGi~~~~~~~~~~~~~~r~~~~~~~~~~~~llWsdp 207 (260)
+. .+....+......+...+|+.++|+..... .++++||||++|.++..+........+.....+...+++.+--
T Consensus 77 ~~~~~~~d~l~~~l~a~~~~ell~wLr~lPl~i~~~~~~~~lVHAGi~P~w~l~~a~~~a~eve~~L~~~~~~~fl~~my 156 (279)
T TIGR00668 77 ISRNKPKDRLDPLLEAPDADELLNWLRRQPLLQHDEEKKLVMAHAGITPQWDLQTAKECARDVEAVLSSDSYPFFLDAMY 156 (279)
T ss_pred CCccCchHHHHHHHHccCHHHHHHHHHcCCcEEEeCCCCEEEEecCCCCCCcHHHHHHHHHHHHHHHcCCCHHHHHHHhh
Confidence 42 223333333455678899999999988654 4699999999999964444332222222222221111211111
Q ss_pred CC-CCCCCcCCCCCc-EEEcCCchHHHHHHhhCCCcchh
Q 024923 208 DD-RCGWGISPRGAG-YTFGQVNTIALSFRHCMSPIQKT 244 (260)
Q Consensus 208 ~~-~~~~~~~~rg~~-~~fGh~h~~~~~f~~~n~~i~~~ 244 (260)
.+ -..|.+...|.. ..|--+.....+||..+|.++..
T Consensus 157 gn~p~~W~~~l~g~~r~r~i~n~~TRmR~c~~~g~ld~~ 195 (279)
T TIGR00668 157 GDMPNRWSPELQGLARLRFIINAFTRMRFCFPNGQLDMY 195 (279)
T ss_pred CCCCccCCCCCchHHHHHHHHHHHhhheeeCCCCCCccc
Confidence 11 123554444433 22333333556777777777763
No 25
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=99.95 E-value=7e-28 Score=210.79 Aligned_cols=181 Identities=20% Similarity=0.266 Sum_probs=125.5
Q ss_pred eeEecCCCCCHHHHHHHHHHcCCC-CCCceeeeeceecCCCCcHHHHHHHHhcchhCCCcEEEECCCcchhhhhhhhcch
Q 024923 56 VTICGDIHGQFHDLAELFRIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFY 134 (260)
Q Consensus 56 i~viGDIHG~~~~L~~ll~~~~~~-~~~~~vflGD~vdrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~~~ 134 (260)
++||||||||+++|+++|+++++. +.+.++|+||+|||||+|.+|++++++++ .++++|+||||.++++..++..
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~s~evl~~l~~l~----~~v~~VlGNHD~~ll~~~~g~~ 76 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNRGPDSLETLRFVKSLG----DSAKTVLGNHDLHLLAVAAGIK 76 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcCHHHHHHHHHhcC----CCeEEEcCCchHHHHHHhcCcc
Confidence 589999999999999999999976 46889999999999999999999999986 3699999999999887655532
Q ss_pred ----HHHHHHhCChhhHHHHHHHhhcCCeEEEEcC-cEEEEcCCCCCCCCcHHHHhcccccccCCCC----CCccccccC
Q 024923 135 ----DECLRKYGNANVWKIFTDLFDYFPLTALVES-EIFCLHGGLSPSIETLDNIRNFDRVQEVPHE----GPMCDLLWS 205 (260)
Q Consensus 135 ----~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~-~~l~vHgGi~~~~~~~~~~~~~~r~~~~~~~----~~~~~llWs 205 (260)
.+...++......+...+|+.++|+...+++ ++++||||++|.++..+.....+........ ..+..+.|+
T Consensus 77 ~~~~~~t~~~~l~~~~~~~~~~wLr~lPl~~~~~~~~~l~vHAGi~p~w~~~~~~~~a~eve~~l~~~~~~~~~~~my~~ 156 (257)
T cd07422 77 KPKKKDTLDDILNAPDRDELLDWLRHQPLLHRDPELGILMVHAGIPPQWSIEQALKLAREVEAALRGPNYREFLKNMYGN 156 (257)
T ss_pred ccccHhHHHHHHhccchHHHHHHHHhCCCEEEECCccEEEEccCCCCCCCHHHHHHHHHHHHHHhcCCcHHHHHHHhhCC
Confidence 2233333334445678899999999998764 8999999999998644332222222222111 123445555
Q ss_pred CCCCCCCCCcCCCCCc-EEEcCCchHHHHHHhhCCCcch
Q 024923 206 DPDDRCGWGISPRGAG-YTFGQVNTIALSFRHCMSPIQK 243 (260)
Q Consensus 206 dp~~~~~~~~~~rg~~-~~fGh~h~~~~~f~~~n~~i~~ 243 (260)
.|. .|..+.+|.. ..|--+.....+||..+|.++.
T Consensus 157 ~p~---~W~~~l~g~~r~r~~~n~~trmR~~~~~g~l~~ 192 (257)
T cd07422 157 EPD---RWSDDLTGIDRLRYIVNAFTRMRFCTPDGRLDF 192 (257)
T ss_pred CCc---ccCcccCccHHHHHHHHHhhceeeecCCCCEee
Confidence 453 3544444433 2333333345566666666555
No 26
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=99.94 E-value=4.3e-27 Score=201.88 Aligned_cols=168 Identities=19% Similarity=0.188 Sum_probs=112.8
Q ss_pred cCceeEecCCCCCHHHHHHHHHHcCCC-CCCceeeeeceecCCCCcHHHHHHHHhcchhCCCcEEEECCCcchhhhhhhh
Q 024923 53 KSPVTICGDIHGQFHDLAELFRIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVY 131 (260)
Q Consensus 53 ~~~i~viGDIHG~~~~L~~ll~~~~~~-~~~~~vflGD~vdrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~ 131 (260)
.++++||||||||+++|.++|+++++. ..++++||||+|||||+|.+|++++.+. ++++|+||||.++++...
T Consensus 16 ~~ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~~vl~~l~~~------~~~~v~GNHE~~~l~~~~ 89 (218)
T PRK11439 16 WRHIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSLRCLQLLEEH------WVRAVRGNHEQMALDALA 89 (218)
T ss_pred CCeEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHHHHHHHHHcC------CceEeeCchHHHHHHHHH
Confidence 459999999999999999999999886 4678999999999999999999999763 478999999999887543
Q ss_pred cchHHHHHH--------hCC--hhhHHHHHHHhhcCCeEEEEc---CcEEEEcCCCCCCCCcHHHHhcccccccCCCCCC
Q 024923 132 GFYDECLRK--------YGN--ANVWKIFTDLFDYFPLTALVE---SEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGP 198 (260)
Q Consensus 132 ~~~~e~~~~--------~~~--~~~~~~~~~~~~~lP~~~~i~---~~~l~vHgGi~~~~~~~~~~~~~~r~~~~~~~~~ 198 (260)
+.....+.. ... ........+|+++||+...++ +++++||||++... ...+ . ...
T Consensus 90 ~~~~~~w~~~gg~~~~~l~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~p~~~-~~~~-~----------~~~ 157 (218)
T PRK11439 90 SQQMSLWLMNGGDWFIALTDNQQKQAKTLLEKCQRLPFILEVHCRTGKHVIAHADYPADV-YEWQ-K----------DVD 157 (218)
T ss_pred CCccchhhhCCChhhhhcchhhhHHHHHHHHHHhcCCcEEEeeccCCCEEEEeCCCCCCc-hhhh-c----------cCC
Confidence 211111111 111 123455678999999998654 57999999974322 1111 0 012
Q ss_pred ccccccCCCCCCCCCCc-CCCCC-cEEEcCCchHHHHHHhhCCC
Q 024923 199 MCDLLWSDPDDRCGWGI-SPRGA-GYTFGQVNTIALSFRHCMSP 240 (260)
Q Consensus 199 ~~~llWsdp~~~~~~~~-~~rg~-~~~fGh~h~~~~~f~~~n~~ 240 (260)
..+++|+++.....+.. ...+. .++|||+ ++......++.
T Consensus 158 ~~~~~w~r~~~~~~~~~~~~~~~~~vv~GHT--~~~~~~~~~~~ 199 (218)
T PRK11439 158 LHQVLWSRSRLGERQKGQGITGADHFWFGHT--PLRHRVDIGNL 199 (218)
T ss_pred ccceEEcChhhhhccccccccCCCEEEECCc--cCCCccccCCE
Confidence 35678987653222211 11132 4899999 55444444443
No 27
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=99.94 E-value=4e-27 Score=208.00 Aligned_cols=183 Identities=19% Similarity=0.266 Sum_probs=126.5
Q ss_pred CceeEecCCCCCHHHHHHHHHHcCCC-CCCceeeeeceecCCCCcHHHHHHHHhcchhCCCcEEEECCCcchhhhhhhhc
Q 024923 54 SPVTICGDIHGQFHDLAELFRIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYG 132 (260)
Q Consensus 54 ~~i~viGDIHG~~~~L~~ll~~~~~~-~~~~~vflGD~vdrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~ 132 (260)
|+++||||||||+++|.++++++++. ..+.++|+||+|||||+|.+|++++.++. .++++|+||||.++++..++
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s~~vl~~l~~l~----~~~~~VlGNHD~~ll~~~~g 76 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPDSLEVLRFVKSLG----DSAVTVLGNHDLHLLAVAAG 76 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcCHHHHHHHHHhcC----CCeEEEecChhHHHHHhhcC
Confidence 57999999999999999999999875 46789999999999999999999999874 35999999999998876555
Q ss_pred ch----HHHHHHhCChhhHHHHHHHhhcCCeEEEE-cCcEEEEcCCCCCCCCcHHHHhcccccccCCCC----CCccccc
Q 024923 133 FY----DECLRKYGNANVWKIFTDLFDYFPLTALV-ESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHE----GPMCDLL 203 (260)
Q Consensus 133 ~~----~e~~~~~~~~~~~~~~~~~~~~lP~~~~i-~~~~l~vHgGi~~~~~~~~~~~~~~r~~~~~~~----~~~~~ll 203 (260)
.. .....++......+...+|++++|+...+ ++++++||||++|.++..+........+..... ..+..+.
T Consensus 77 ~~~~~~~~~l~~~l~~~~~~~~~~~L~~lPl~~~~~~~~~l~vHAGi~p~~~~~~~~~~a~eve~~l~~~~~~~~~~~my 156 (275)
T PRK00166 77 IKRNKKKDTLDPILEAPDRDELLDWLRHQPLLHVDEELGLVMVHAGIPPQWDLATALALAREVEAVLRSDDYRDFLANMY 156 (275)
T ss_pred CccccchhHHHHHHccccHHHHHHHHHCCCcEEEECCCCEEEEccCCCCCCCHHHHHHHHHHHHHHhcCCcHHHHHHHhc
Confidence 32 22334443334456788999999998876 468999999999998644433222222221111 1234555
Q ss_pred cCCCCCCCCCCcCCCCCc-EEEcCCchHHHHHHhhCCCcch
Q 024923 204 WSDPDDRCGWGISPRGAG-YTFGQVNTIALSFRHCMSPIQK 243 (260)
Q Consensus 204 Wsdp~~~~~~~~~~rg~~-~~fGh~h~~~~~f~~~n~~i~~ 243 (260)
|+.|. .|.++..|.. ..|--......+||..+|.++.
T Consensus 157 ~~~p~---~W~~~l~~~~r~r~~~n~~trmR~~~~~g~l~~ 194 (275)
T PRK00166 157 GNEPD---RWSPDLTGLERLRYIINAFTRMRFCTPDGRLDF 194 (275)
T ss_pred CCCcC---ccCcccCchHHHHHHHHHHhhhhcccCCCceee
Confidence 55553 3554444432 2333332344677777765544
No 28
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=99.94 E-value=4.3e-26 Score=200.61 Aligned_cols=168 Identities=20% Similarity=0.277 Sum_probs=121.4
Q ss_pred ceeEecCCCCCHHHHHHHHHHcCCC------CCCceeeeeceecCCCCcHHHHHHHHhcchhCCC-cEEEECCCcchhhh
Q 024923 55 PVTICGDIHGQFHDLAELFRIGGKC------PDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQ-RITILRGNHESRQI 127 (260)
Q Consensus 55 ~i~viGDIHG~~~~L~~ll~~~~~~------~~~~~vflGD~vdrG~~s~evl~~l~~lk~~~p~-~v~~lrGNHE~~~~ 127 (260)
++++|||||||++.|.++++.+... ..+.+|||||||||||+|.+|++++.+++..+|. ++++|+||||.+++
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~l 82 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAFA 82 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHHH
Confidence 6899999999999999999876422 2456999999999999999999999999888875 68999999998865
Q ss_pred hhhhc-----------------------------------------c----------------------hHHHHHHhCCh
Q 024923 128 TQVYG-----------------------------------------F----------------------YDECLRKYGNA 144 (260)
Q Consensus 128 ~~~~~-----------------------------------------~----------------------~~e~~~~~~~~ 144 (260)
..... | ..+++.+||-.
T Consensus 83 ~fL~~~p~~~d~~~f~~~w~~~~~~~e~~~~~~~~~~~~~h~~g~~W~~~~~~~~~~~~~~~~~~~~~gg~~Tl~SYGv~ 162 (304)
T cd07421 83 AFLGVLPRPSDGSEFKSTWKEYEKNEEREGWYKGEGFENMHLQGRRWAGKMKVTFNTVRGEPYKGSIYDARPTFESYGVP 162 (304)
T ss_pred hHhhcCCCccchhhhhhhhccccccccccccccccccccccccccchhhhccccccccccccccccccCcHHHHHHcCCC
Confidence 43211 0 13566777632
Q ss_pred --------hhHHHHHHHhhcCCeEEEEcCcE-------------EEEcCCCCCCCCcHHHHhccc-ccccCCCCCCcccc
Q 024923 145 --------NVWKIFTDLFDYFPLTALVESEI-------------FCLHGGLSPSIETLDNIRNFD-RVQEVPHEGPMCDL 202 (260)
Q Consensus 145 --------~~~~~~~~~~~~lP~~~~i~~~~-------------l~vHgGi~~~~~~~~~~~~~~-r~~~~~~~~~~~~l 202 (260)
.+.+...+|+++||..... +++ +|||||+.|+.+..+|.+.+. +-...| -.++
T Consensus 163 ~~~~~l~~avP~~H~~fl~~l~~~~~~-~~~~~~~~~g~~~~~lifVHAGlrPg~pLe~Q~~~L~~~d~~~p----~~~~ 237 (304)
T cd07421 163 HGSSDLIKAVPEEHKKFLRNLVWVHEE-DDVCIETEEGLKHCKLIAVHAGLEKSNSVEEQLKLLRTKDTSIP----KIAP 237 (304)
T ss_pred cchHHHHHhCCHHHHHHHHhCCceEEe-CcccccccccccccceEEEEcccCCCCChHHhhhhhhccccccc----cccc
Confidence 2345678999999998874 556 999999999999888887643 212222 2488
Q ss_pred ccCCCCCCCCC-CcCCCCCcEEEcCC
Q 024923 203 LWSDPDDRCGW-GISPRGAGYTFGQV 227 (260)
Q Consensus 203 lWsdp~~~~~~-~~~~rg~~~~fGh~ 227 (260)
+|.+......- .....+.-++.||+
T Consensus 238 l~~R~~f~~~~~~~~~~~~~VVhGHt 263 (304)
T cd07421 238 LSGRKNVWNIPQELADKKTIVVSGHH 263 (304)
T ss_pred cccchhhhcCcccccCCCeEEEECCC
Confidence 99866531100 00122345778887
No 29
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=99.93 E-value=2e-25 Score=189.96 Aligned_cols=165 Identities=21% Similarity=0.280 Sum_probs=115.0
Q ss_pred CceeEecCCCCCHHHHHHHHHHcCCC-CCCceeeeeceecCCCCcHHHHHHHHhcchhCCCcEEEECCCcchhhhhhhhc
Q 024923 54 SPVTICGDIHGQFHDLAELFRIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYG 132 (260)
Q Consensus 54 ~~i~viGDIHG~~~~L~~ll~~~~~~-~~~~~vflGD~vdrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~ 132 (260)
+|++||||||||+.+|.++++.+++. ..+.++|+||+|||||++.++++++.+. ++++|+||||.+++....+
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~~~~~~~l~~~------~~~~v~GNhe~~~~~~~~~ 74 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLIDRGPESLACLELLLEP------WFHAVRGNHEQMAIDALRA 74 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCHHHHHHHHhcC------CEEEeECCChHHHHhHhhC
Confidence 47999999999999999999998865 4677889999999999999999998752 4899999999998876543
Q ss_pred --chHHHHHHhCC--------hhhHHHHHHHhhcCCeEEEEc---CcEEEEcCCCCCCCCcHHHHhcccccccCCCCCCc
Q 024923 133 --FYDECLRKYGN--------ANVWKIFTDLFDYFPLTALVE---SEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPM 199 (260)
Q Consensus 133 --~~~e~~~~~~~--------~~~~~~~~~~~~~lP~~~~i~---~~~l~vHgGi~~~~~~~~~~~~~~r~~~~~~~~~~ 199 (260)
...+.+.+.+. ....+...+|+++||++..++ .++++||||+++... ...... +.......
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~g~~~~~vHag~~~~~~-~~~~~~-----~~~~~~~~ 148 (207)
T cd07424 75 EPLDAVRWLANGGEWFLDLPDEELRRWLALKLEQLPLAIEVETEGGKVGIVHADYPSDDW-SDGVGA-----VTLRPEDI 148 (207)
T ss_pred CCcchhHHHhcCCeehhhcChHHHHHHHHHHHHhCCeEEEEEeCCCEEEEECCCCCcchh-hhhhhc-----cccCcccc
Confidence 22223333322 124556788999999998764 479999999865431 111100 11222345
Q ss_pred cccccCCCCCCCCCCcCCCC-CcEEEcCCchH
Q 024923 200 CDLLWSDPDDRCGWGISPRG-AGYTFGQVNTI 230 (260)
Q Consensus 200 ~~llWsdp~~~~~~~~~~rg-~~~~fGh~h~~ 230 (260)
.+++|+++...........+ ..++|||+|++
T Consensus 149 ~~~~w~~~~~~~~~~~~~~~~~~iV~GHTh~~ 180 (207)
T cd07424 149 EELLWSRTRIQKAQTQPIKGVDAVVHGHTPVK 180 (207)
T ss_pred eeeeeccchhhhcCccccCCCCEEEECCCCCC
Confidence 67899977642221112223 35899999654
No 30
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=99.91 E-value=9.2e-24 Score=181.23 Aligned_cols=160 Identities=18% Similarity=0.199 Sum_probs=106.0
Q ss_pred cCceeEecCCCCCHHHHHHHHHHcCCC-CCCceeeeeceecCCCCcHHHHHHHHhcchhCCCcEEEECCCcchhhhhhhh
Q 024923 53 KSPVTICGDIHGQFHDLAELFRIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVY 131 (260)
Q Consensus 53 ~~~i~viGDIHG~~~~L~~ll~~~~~~-~~~~~vflGD~vdrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~ 131 (260)
.+|++||||||||+++|+++++.+.+. ..+.++|+||+|||||+|.++++++.+. ++++|+||||.++++...
T Consensus 14 ~~ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~~~l~~l~~~------~~~~v~GNHE~~~~~~~~ 87 (218)
T PRK09968 14 YRHIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESLNVLRLLNQP------WFISVKGNHEAMALDAFE 87 (218)
T ss_pred CCeEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHHHHHHHHhhC------CcEEEECchHHHHHHHHh
Confidence 359999999999999999999998865 4578889999999999999999998642 589999999999886432
Q ss_pred cchH--------HHHHHhCCh--hhHHHHHHHhhcCCeEEEEc---CcEEEEcCCCCCCCCcHHHHhcccccccCCCCCC
Q 024923 132 GFYD--------ECLRKYGNA--NVWKIFTDLFDYFPLTALVE---SEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGP 198 (260)
Q Consensus 132 ~~~~--------e~~~~~~~~--~~~~~~~~~~~~lP~~~~i~---~~~l~vHgGi~~~~~~~~~~~~~~r~~~~~~~~~ 198 (260)
.-.. +...+...+ ........|+++||+...+. +++++||||++... ..... ...
T Consensus 88 ~~~~~~~~~~gg~~~~~l~~~~~~~~~~~~~~L~~LP~~~~~~~~g~~~~~vHAg~p~~~--~~~~~----------~~~ 155 (218)
T PRK09968 88 TGDGNMWLASGGDWFFDLNDSEQQEATDLLLKFHHLPHIIEITNDNIKYVIAHADYPGDE--YDFGK----------EIA 155 (218)
T ss_pred cCChhHHHHccCHHHhcCCHHHHHHHHHHHHHHhcCCeEEEEeeCCCcEEEEeCCCCCch--hhhcc----------ccc
Confidence 1100 111111111 12233456999999988664 46999999983321 11110 011
Q ss_pred ccccccCCCCCCCC---CCcC-CCCCcEEEcCCchH
Q 024923 199 MCDLLWSDPDDRCG---WGIS-PRGAGYTFGQVNTI 230 (260)
Q Consensus 199 ~~~llWsdp~~~~~---~~~~-~rg~~~~fGh~h~~ 230 (260)
..+++|.++..... |... ..+..++|||+|++
T Consensus 156 ~~~~~w~r~~~~~~~~~~~~~~~~~~~vv~GHTh~~ 191 (218)
T PRK09968 156 ESELLWPVDRVQKSLNGELQQINGADYFIFGHMMFD 191 (218)
T ss_pred hhhceeCcHHHhhCccccccccCCCCEEEECCCCcC
Confidence 24668986543222 2221 22334899999554
No 31
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=99.89 E-value=1.6e-23 Score=178.48 Aligned_cols=121 Identities=24% Similarity=0.423 Sum_probs=92.0
Q ss_pred eEecCCCCCHHHHHHHHHHcCC--------CCCCceeeeeceecCCCCcHHHHHHHHhcchh---CCCcEEEECCCcchh
Q 024923 57 TICGDIHGQFHDLAELFRIGGK--------CPDTNYLFMGDYVDRGYYSVETVTLLVSLKVR---YPQRITILRGNHESR 125 (260)
Q Consensus 57 ~viGDIHG~~~~L~~ll~~~~~--------~~~~~~vflGD~vdrG~~s~evl~~l~~lk~~---~p~~v~~lrGNHE~~ 125 (260)
+||||||||+++|.++|+.+++ .+.+.+|++||+|||||++.++++++++++.. .+.++++|+||||.+
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 5899999999999999999875 35678999999999999999999999998753 346799999999999
Q ss_pred hhhhhhcchH-HHHHHhCC-----h---hhHHHHHHHhhcCCeEEEEcCcEEEEcCCCCCCC
Q 024923 126 QITQVYGFYD-ECLRKYGN-----A---NVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSI 178 (260)
Q Consensus 126 ~~~~~~~~~~-e~~~~~~~-----~---~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~~~~ 178 (260)
.++..+.+.. ........ . .....+.+|++++|+...+ ++++|||||++|.+
T Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lP~~~~~-~~~~fvHag~~~~w 141 (208)
T cd07425 81 NLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSKPVIVKV-NDTLFVHGGLGPLW 141 (208)
T ss_pred HHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhCCeEEEE-CCEEEEeCCcHHHH
Confidence 8864432211 11111100 0 1123458999999999886 57999999995543
No 32
>PRK09453 phosphodiesterase; Provisional
Probab=99.45 E-value=3.4e-13 Score=112.40 Aligned_cols=69 Identities=19% Similarity=0.301 Sum_probs=57.0
Q ss_pred CceeEecCCCCCHHHHHHHHHHcCCCCCCceeeeeceecCCCC--------cHHHHHHHHhcchhCCCcEEEECCCcchh
Q 024923 54 SPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYY--------SVETVTLLVSLKVRYPQRITILRGNHESR 125 (260)
Q Consensus 54 ~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vflGD~vdrG~~--------s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 125 (260)
||+.++||+||++.++.++++.+...+.+.++++||++|+|+. +.++++.+.++. ..+++++||||..
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~~----~~v~~V~GNhD~~ 76 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAYA----DKIIAVRGNCDSE 76 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhcC----CceEEEccCCcch
Confidence 5899999999999999999998766677889999999998873 456777776553 2499999999975
Q ss_pred h
Q 024923 126 Q 126 (260)
Q Consensus 126 ~ 126 (260)
.
T Consensus 77 ~ 77 (182)
T PRK09453 77 V 77 (182)
T ss_pred h
Confidence 3
No 33
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=99.35 E-value=3e-12 Score=104.21 Aligned_cols=63 Identities=16% Similarity=0.210 Sum_probs=50.8
Q ss_pred CceeEecCCCCCHHHHHHHHHHcCCC-CCCceeeeeceecCCCCcHHHHHHHHhcchhCCCcEEEECCCcchh
Q 024923 54 SPVTICGDIHGQFHDLAELFRIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESR 125 (260)
Q Consensus 54 ~~i~viGDIHG~~~~L~~ll~~~~~~-~~~~~vflGD~vdrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 125 (260)
|++.++||+||+..++..+++.+... +.+.++++||++ +.++++.+.++.. .+++++||||..
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~-----~~~~~~~l~~~~~----~~~~V~GN~D~~ 64 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLT-----SPFVLKEFEDLAA----KVIAVRGNNDGE 64 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCC-----CHHHHHHHHHhCC----ceEEEccCCCch
Confidence 58999999999998888777766555 568889999998 4678887776542 389999999983
No 34
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=99.31 E-value=1.1e-11 Score=100.19 Aligned_cols=84 Identities=24% Similarity=0.392 Sum_probs=62.8
Q ss_pred ceeEecCCCCCHHHHHHHHHHcCCCCCCceeeeeceecCCCCcHHHHHHHHhcchhCCCcEEEECCCcchhhhhhhhcch
Q 024923 55 PVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFY 134 (260)
Q Consensus 55 ~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vflGD~vdrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~~~ 134 (260)
|+.++||+||+...+.++++.+.. .+.++++||++++++.+. +... ..+++++||||....
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~~--~d~ii~~GD~~~~~~~~~--------~~~~--~~~~~V~GNhD~~~~------- 61 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFGD--VDLIIHAGDVLYPGPLNE--------LELK--APVIAVRGNCDGEVD------- 61 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhcC--CCEEEECCccccccccch--------hhcC--CcEEEEeCCCCCcCC-------
Confidence 588999999999999999998754 678999999999998665 1112 248999999998531
Q ss_pred HHHHHHhCChhhHHHHHHHhhcCCeEEEE--c-CcEEEEcCCCCC
Q 024923 135 DECLRKYGNANVWKIFTDLFDYFPLTALV--E-SEIFCLHGGLSP 176 (260)
Q Consensus 135 ~e~~~~~~~~~~~~~~~~~~~~lP~~~~i--~-~~~l~vHgGi~~ 176 (260)
+..+|....+ + .+++++||...+
T Consensus 62 -------------------~~~~p~~~~~~~~g~~i~v~Hg~~~~ 87 (155)
T cd00841 62 -------------------FPILPEEAVLEIGGKRIFLTHGHLYG 87 (155)
T ss_pred -------------------cccCCceEEEEECCEEEEEECCcccc
Confidence 3455644433 2 379999996533
No 35
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.20 E-value=5.7e-11 Score=94.19 Aligned_cols=76 Identities=22% Similarity=0.281 Sum_probs=56.0
Q ss_pred CceeEecCCCCCHHHH----HHHHHHcCCCCCCceeeeeceecCCCCcHHHHHHH--HhcchhCCCcEEEECCCcchhhh
Q 024923 54 SPVTICGDIHGQFHDL----AELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLL--VSLKVRYPQRITILRGNHESRQI 127 (260)
Q Consensus 54 ~~i~viGDIHG~~~~L----~~ll~~~~~~~~~~~vflGD~vdrG~~s~evl~~l--~~lk~~~p~~v~~lrGNHE~~~~ 127 (260)
+||+++||+|+..... ..+.......+.+.+|++||+++++..+....... .......+..+++++||||....
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~~ 80 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYSG 80 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHHH
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhcccccccccccccccee
Confidence 4899999999999988 34444444456778899999999999887766654 33333344569999999999875
Q ss_pred hh
Q 024923 128 TQ 129 (260)
Q Consensus 128 ~~ 129 (260)
..
T Consensus 81 ~~ 82 (200)
T PF00149_consen 81 NS 82 (200)
T ss_dssp HH
T ss_pred cc
Confidence 43
No 36
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.16 E-value=5.1e-11 Score=95.67 Aligned_cols=61 Identities=23% Similarity=0.464 Sum_probs=47.0
Q ss_pred CceeEecCCCCCHHHHHHHHHHcCCCCCCceeeeeceecCCCCcHHHHHHHHhcchhCCCcEEEECCCcchhh
Q 024923 54 SPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQ 126 (260)
Q Consensus 54 ~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vflGD~vdrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~ 126 (260)
||++++||+|++...+.++++.+ ...+.++++||++++ .++++.+... .+++++||||...
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~~----~~~~~~~~~~------~~~~v~GNHD~~~ 61 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFDP----EEVLELLRDI------PVYVVRGNHDNWA 61 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCSH----HHHHHHHHHH------EEEEE--CCHSTH
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchhH----HHHHHHHhcC------CEEEEeCCccccc
Confidence 68999999999999999999988 346788899999983 7777777655 3999999999765
No 37
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=99.01 E-value=1.7e-10 Score=91.41 Aligned_cols=61 Identities=21% Similarity=0.298 Sum_probs=43.0
Q ss_pred ceeEecCCCCCHHHHHHHHHHcCCCCCCceeeeeceecCCCCcH--HHHHHHHhcchhCCCcEEEECCCcchh
Q 024923 55 PVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSV--ETVTLLVSLKVRYPQRITILRGNHESR 125 (260)
Q Consensus 55 ~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vflGD~vdrG~~s~--evl~~l~~lk~~~p~~v~~lrGNHE~~ 125 (260)
+++++||+||++. .+...+.+.+|++||+++++..+. +.++++.+++ .| .+++++||||..
T Consensus 1 ~i~~isD~H~~~~-------~~~~~~~D~vi~~GD~~~~~~~~~~~~~~~~l~~~~--~~-~~~~v~GNHD~~ 63 (135)
T cd07379 1 RFVCISDTHSRHR-------TISIPDGDVLIHAGDLTERGTLEELQKFLDWLKSLP--HP-HKIVIAGNHDLT 63 (135)
T ss_pred CEEEEeCCCCCCC-------cCcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHhCC--CC-eEEEEECCCCCc
Confidence 5799999999987 223345677889999999876432 3555555543 22 367899999974
No 38
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.99 E-value=2e-09 Score=89.65 Aligned_cols=59 Identities=22% Similarity=0.352 Sum_probs=43.0
Q ss_pred ceeEecCCC-CCHH-----HHHHHHHHcCCCCCCceeeeeceecCCCCcHHHHHHHHhcchhCCCcEEEECCCcchh
Q 024923 55 PVTICGDIH-GQFH-----DLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESR 125 (260)
Q Consensus 55 ~i~viGDIH-G~~~-----~L~~ll~~~~~~~~~~~vflGD~vdrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 125 (260)
+|.||||+| |... .+.++++. .+.+.++++||+++ .++++++.++. ..+++|+||||..
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~---~~~d~iih~GDi~~-----~~~~~~l~~~~----~~~~~V~GN~D~~ 65 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVP---GKIQHVLCTGNLCS-----KETYDYLKTIA----PDVHIVRGDFDEN 65 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhcc---CCCCEEEECCCCCC-----HHHHHHHHhhC----CceEEEECCCCcc
Confidence 478999999 6543 24444433 45678999999986 67888876653 1489999999973
No 39
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=98.98 E-value=1.9e-09 Score=93.39 Aligned_cols=113 Identities=24% Similarity=0.315 Sum_probs=75.9
Q ss_pred ceeEecCCCCCHHHHH-HHHHHcCCCCCCceeeeeceecCCCCcHHHHHHHHhcchhCCCcEEEECCCcchhhhhhh---
Q 024923 55 PVTICGDIHGQFHDLA-ELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQV--- 130 (260)
Q Consensus 55 ~i~viGDIHG~~~~L~-~ll~~~~~~~~~~~vflGD~vdrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~--- 130 (260)
+|+++|||||++.... ..++. ...+.++++||+++ .+.+++..+.++. +| +++++||||.+.....
T Consensus 2 rIa~isDiHg~~~~~~~~~l~~---~~pD~Vl~~GDi~~---~~~~~~~~l~~l~--~p--~~~V~GNHD~~~~~~~~~k 71 (238)
T cd07397 2 RIAIVGDVHGQWDLEDIKALHL---LQPDLVLFVGDFGN---ESVQLVRAISSLP--LP--KAVILGNHDAWYDATFRKK 71 (238)
T ss_pred EEEEEecCCCCchHHHHHHHhc---cCCCEEEECCCCCc---ChHHHHHHHHhCC--CC--eEEEcCCCcccccccccch
Confidence 6899999999987743 23333 34578899999986 4577777776653 33 8999999998653200
Q ss_pred h-----------------c----------------c--------hH-HHHHHhCChhhHHHHHHHhhcCCeEEEEcCcEE
Q 024923 131 Y-----------------G----------------F--------YD-ECLRKYGNANVWKIFTDLFDYFPLTALVESEIF 168 (260)
Q Consensus 131 ~-----------------~----------------~--------~~-e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l 168 (260)
+ + | .. ++...|+.....+.+...++.++.+.....+++
T Consensus 72 ~~~l~~~L~~lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi~s~~eA~~~ive~~~~~~~~~~~Vl 151 (238)
T cd07397 72 GDRVQEQLELLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGVISLEESAQRIIAAAKKAPPDLPLIL 151 (238)
T ss_pred HHHHHHHHHHhCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCCCCHHHHHHHHHHHhhhcCCCCCeEE
Confidence 0 0 0 01 455556656667777788888863333235799
Q ss_pred EEcCCCCCC
Q 024923 169 CLHGGLSPS 177 (260)
Q Consensus 169 ~vHgGi~~~ 177 (260)
+.|+++.-.
T Consensus 152 iaH~~~~G~ 160 (238)
T cd07397 152 LAHNGPSGL 160 (238)
T ss_pred EeCcCCcCC
Confidence 999987544
No 40
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=98.90 E-value=2.9e-09 Score=91.72 Aligned_cols=71 Identities=11% Similarity=0.169 Sum_probs=57.7
Q ss_pred CceeEecCCCCCHHHHHHHHHHcCCCCCCceeeeeceecCCCCcHHHHHHHHhcchhCCCcEEEECCCcchh
Q 024923 54 SPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESR 125 (260)
Q Consensus 54 ~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vflGD~vdrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 125 (260)
+++.++||+||++..+.++++.....+.+.+|++||++++|+...++..++..+.... ..+++++||||..
T Consensus 5 ~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~~l~-~pv~~V~GNhD~~ 75 (224)
T cd07388 5 RYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILGEAH-LPTFYVPGPQDAP 75 (224)
T ss_pred eEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhcC-CceEEEcCCCChH
Confidence 5899999999999999999997755567889999999999976766766666554321 2389999999985
No 41
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.74 E-value=3.9e-08 Score=81.29 Aligned_cols=64 Identities=16% Similarity=0.260 Sum_probs=45.3
Q ss_pred CceeEecCCCCCHHHHHHHHHHcCCCCCCceeeeeceecCCCCcHHHHHHHHhcchhCCCcEEEECCCcchh
Q 024923 54 SPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESR 125 (260)
Q Consensus 54 ~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vflGD~vdrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 125 (260)
|++.|+||+||...+-.+..+.....+.+.+|.+||++... +...+..- +. .+++.++||.|..
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~--~~~~l~~~--~~----~~i~~V~GN~D~~ 65 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPF--TLDALEGG--LA----AKLIAVRGNCDGE 65 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCcc--chHHhhcc--cc----cceEEEEccCCCc
Confidence 68999999999997655555555555678888999999543 22222221 22 3599999998874
No 42
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=98.66 E-value=4.1e-08 Score=81.11 Aligned_cols=66 Identities=21% Similarity=0.317 Sum_probs=47.8
Q ss_pred eeEecCCCCCHHHHHHHHHHcCCCCCCceeeeeceecCCCCc-HHHHHHHHhcchhCCCcEEEECCCcchhhh
Q 024923 56 VTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYS-VETVTLLVSLKVRYPQRITILRGNHESRQI 127 (260)
Q Consensus 56 i~viGDIHG~~~~L~~ll~~~~~~~~~~~vflGD~vdrG~~s-~evl~~l~~lk~~~p~~v~~lrGNHE~~~~ 127 (260)
|+++||+||++..+.. ..+...+.+.+|++||++++|... .+.++.+.+++ ..+++++||||....
T Consensus 1 i~~~sD~H~~~~~~~~--~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~l~~~~----~p~~~v~GNHD~~~~ 67 (188)
T cd07392 1 ILAISDIHGDVEKLEA--IILKAEEADAVIVAGDITNFGGKEAAVEINLLLAIG----VPVLAVPGNCDTPEI 67 (188)
T ss_pred CEEEEecCCCHHHHHH--HHhhccCCCEEEECCCccCcCCHHHHHHHHHHHhcC----CCEEEEcCCCCCHHH
Confidence 5789999999999887 333444567888999999998753 33344444332 239999999998643
No 43
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=98.54 E-value=1.3e-07 Score=80.74 Aligned_cols=71 Identities=21% Similarity=0.190 Sum_probs=55.0
Q ss_pred CceeEecCCCCCHH----HHHHHHHHcCCCCCCceeeeeceecCCCCcH-HHHHHHHhcchhCCCcEEEECCCcchhh
Q 024923 54 SPVTICGDIHGQFH----DLAELFRIGGKCPDTNYLFMGDYVDRGYYSV-ETVTLLVSLKVRYPQRITILRGNHESRQ 126 (260)
Q Consensus 54 ~~i~viGDIHG~~~----~L~~ll~~~~~~~~~~~vflGD~vdrG~~s~-evl~~l~~lk~~~p~~v~~lrGNHE~~~ 126 (260)
+++++++|+|+... .+.++++.+.....+.++++||++|.+.... .+.+.+..+....| ++++.||||...
T Consensus 2 ~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~l~~l~~~~~--v~~v~GNHD~~~ 77 (223)
T cd07385 2 LRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVDVLELLLELLKKLKAPLG--VYAVLGNHDYYS 77 (223)
T ss_pred CEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcchhhHHHHHHHhccCCCCC--EEEECCCccccc
Confidence 58999999998754 6777877766556678889999999887764 56666666654444 999999999853
No 44
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=98.52 E-value=1.8e-07 Score=81.35 Aligned_cols=71 Identities=17% Similarity=0.228 Sum_probs=48.4
Q ss_pred CceeEecCCCCCH------HHHHHHHHHcCCCCCCceeeeeceecC--C-----CCcHHHHHHHHhcchhCCCcEEEECC
Q 024923 54 SPVTICGDIHGQF------HDLAELFRIGGKCPDTNYLFMGDYVDR--G-----YYSVETVTLLVSLKVRYPQRITILRG 120 (260)
Q Consensus 54 ~~i~viGDIHG~~------~~L~~ll~~~~~~~~~~~vflGD~vdr--G-----~~s~evl~~l~~lk~~~p~~v~~lrG 120 (260)
|+++++||+|... ..+.+.++... .+.+.++++||++|. | +...++++.+.++... +-.++++.|
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~~-~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~-g~~v~~v~G 78 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGEA-RQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDS-GVPCYFMHG 78 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhhh-ccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHc-CCeEEEEeC
Confidence 5899999999542 23445554322 346788899999985 2 2345677777777643 124999999
Q ss_pred Ccchhh
Q 024923 121 NHESRQ 126 (260)
Q Consensus 121 NHE~~~ 126 (260)
|||...
T Consensus 79 NHD~~~ 84 (241)
T PRK05340 79 NRDFLL 84 (241)
T ss_pred CCchhh
Confidence 999743
No 45
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=98.51 E-value=1.8e-07 Score=82.79 Aligned_cols=71 Identities=20% Similarity=0.185 Sum_probs=54.1
Q ss_pred cCceeEecCCCCC----HHHHHHHHHHcCCCCCCceeeeeceecCC--CCcHHHHHHHHhcchhCCCcEEEECCCcchh
Q 024923 53 KSPVTICGDIHGQ----FHDLAELFRIGGKCPDTNYLFMGDYVDRG--YYSVETVTLLVSLKVRYPQRITILRGNHESR 125 (260)
Q Consensus 53 ~~~i~viGDIHG~----~~~L~~ll~~~~~~~~~~~vflGD~vdrG--~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 125 (260)
..+++++||+|.. ...+.++++.+...+.+.++++||++|.+ ....++.+.+..++...| ++++.||||..
T Consensus 49 ~~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~~~~~~~~~~~L~~L~~~~p--v~~V~GNHD~~ 125 (271)
T PRK11340 49 PFKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMPLNFSAFSDVLSPLAECAP--TFACFGNHDRP 125 (271)
T ss_pred CcEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCccccHHHHHHHHHHHhhcCC--EEEecCCCCcc
Confidence 3689999999976 55677788776656678888999999943 233456667777765555 99999999974
No 46
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=98.51 E-value=4.2e-07 Score=69.49 Aligned_cols=67 Identities=22% Similarity=0.388 Sum_probs=47.7
Q ss_pred eEecCCCCCHHHHHHHH--HHcCCCCCCceeeeeceecCCCCcHHHHHHHHhcchhCCCcEEEECCCcc
Q 024923 57 TICGDIHGQFHDLAELF--RIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHE 123 (260)
Q Consensus 57 ~viGDIHG~~~~L~~ll--~~~~~~~~~~~vflGD~vdrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE 123 (260)
+++||+|+......... ......+.+.+|++||+++.+....+...............++++.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce
Confidence 47999999999998865 33344556778899999999887776554311111222335999999999
No 47
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=98.49 E-value=5.1e-07 Score=74.27 Aligned_cols=67 Identities=27% Similarity=0.399 Sum_probs=44.9
Q ss_pred eeEecCCCCCHHHH---------------HHHHHHcC--CCCCCceeeeeceecCCCCcHHHHHHHHhcchhCCCcEEEE
Q 024923 56 VTICGDIHGQFHDL---------------AELFRIGG--KCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITIL 118 (260)
Q Consensus 56 i~viGDIHG~~~~L---------------~~ll~~~~--~~~~~~~vflGD~vdrG~~s~evl~~l~~lk~~~p~~v~~l 118 (260)
++++||+|=....- .++++.+. ..+.+.+|++||+++++..+.. ++.+.++. ..++++
T Consensus 1 ~~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~~~~~-~~~l~~~~----~~~~~v 75 (168)
T cd07390 1 IYFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGKAGTE-LELLSRLN----GRKHLI 75 (168)
T ss_pred CeEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCChHHH-HHHHHhCC----CCeEEE
Confidence 37889999666532 22343332 2346789999999999886544 55555443 349999
Q ss_pred CCCcchhhh
Q 024923 119 RGNHESRQI 127 (260)
Q Consensus 119 rGNHE~~~~ 127 (260)
+||||....
T Consensus 76 ~GNHD~~~~ 84 (168)
T cd07390 76 KGNHDSSLE 84 (168)
T ss_pred eCCCCchhh
Confidence 999998643
No 48
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=98.43 E-value=1.3e-07 Score=77.18 Aligned_cols=67 Identities=21% Similarity=0.140 Sum_probs=46.7
Q ss_pred eeEecCCCCCHHHHHHHH-HHcCCCCCCceeeeeceecCCCCcHHHHHHHHhcchhCCCcEEEECCCcchh
Q 024923 56 VTICGDIHGQFHDLAELF-RIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESR 125 (260)
Q Consensus 56 i~viGDIHG~~~~L~~ll-~~~~~~~~~~~vflGD~vdrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 125 (260)
+.++||+|+....+...+ +.....+.+.++++||+++++..+.... ++.... .+..+++++||||..
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~~~~~~~-~~~~~~--~~~~v~~v~GNHD~~ 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTDAPRFAP-LLLALK--GFEPVIYVPGNHEFY 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCCcchHHHHH-HHHhhc--CCccEEEeCCCcceE
Confidence 478999999988776655 2233445677889999999887655443 222222 223599999999986
No 49
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=98.26 E-value=1.5e-06 Score=75.45 Aligned_cols=68 Identities=21% Similarity=0.199 Sum_probs=49.4
Q ss_pred ceeEecCCCCCH------HHHHHHHHHcCCCCCCceeeeeceecCCCCcHHHHHHHHhcchhCCCcEEEECCCcchh
Q 024923 55 PVTICGDIHGQF------HDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESR 125 (260)
Q Consensus 55 ~i~viGDIHG~~------~~L~~ll~~~~~~~~~~~vflGD~vdrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 125 (260)
+|++++|+|+++ ..+.++++.+...+.+.+|++||++++.+.+.+.++.+.++ ... .++++.||||..
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~l~~~-~~~--pv~~v~GNHD~~ 74 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISNDFQRSLPFIEKLQEL-KGI--KVTFNAGNHDML 74 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccchhhHHHHHHHHHHh-cCC--cEEEECCCCCCC
Confidence 588999999763 23566777665556788899999999876666666666553 123 399999999964
No 50
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.24 E-value=2.3e-06 Score=73.97 Aligned_cols=68 Identities=10% Similarity=0.122 Sum_probs=43.4
Q ss_pred eeEecCCCCCH------HHHHHHHHHcCCCCCCceeeeeceecCC-----CC--cHHHHHHHHhcchhCCCcEEEECCCc
Q 024923 56 VTICGDIHGQF------HDLAELFRIGGKCPDTNYLFMGDYVDRG-----YY--SVETVTLLVSLKVRYPQRITILRGNH 122 (260)
Q Consensus 56 i~viGDIHG~~------~~L~~ll~~~~~~~~~~~vflGD~vdrG-----~~--s~evl~~l~~lk~~~p~~v~~lrGNH 122 (260)
++++||+|... ..+.+.+..... +.+.++++||++|.. +. ..++.+.+..++.. +..++++.|||
T Consensus 1 ~~~iSDlHl~~~~~~~~~~~l~~l~~~~~-~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~-~~~v~~v~GNH 78 (231)
T TIGR01854 1 TLFISDLHLSPERPDITALFLDFLREEAR-KADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQ-GVPCYFMHGNR 78 (231)
T ss_pred CeEEEecCCCCCChhHHHHHHHHHHhhhc-cCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHC-CCeEEEEcCCC
Confidence 36899999543 234444443321 567888999999852 11 13456666666543 23599999999
Q ss_pred chh
Q 024923 123 ESR 125 (260)
Q Consensus 123 E~~ 125 (260)
|..
T Consensus 79 D~~ 81 (231)
T TIGR01854 79 DFL 81 (231)
T ss_pred chh
Confidence 974
No 51
>PRK04036 DNA polymerase II small subunit; Validated
Probab=98.17 E-value=6.2e-06 Score=79.22 Aligned_cols=114 Identities=18% Similarity=0.288 Sum_probs=63.7
Q ss_pred ccCceeEecCCC-CCH----HHHHHHHHHcC---------CCCCCceeeeeceecC-CCCc---------------HHHH
Q 024923 52 VKSPVTICGDIH-GQF----HDLAELFRIGG---------KCPDTNYLFMGDYVDR-GYYS---------------VETV 101 (260)
Q Consensus 52 ~~~~i~viGDIH-G~~----~~L~~ll~~~~---------~~~~~~~vflGD~vdr-G~~s---------------~evl 101 (260)
.+.+++++||+| |.. ..+..+++.+. ....+.+|++||++|. |+.+ .++.
T Consensus 242 ~~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~ 321 (504)
T PRK04036 242 EKVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAA 321 (504)
T ss_pred CccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHH
Confidence 346799999999 653 23444444433 2234678899999984 3221 1355
Q ss_pred HHHHhcchhCCCcEEEECCCcchhhhhhhh-cchHHHHHHhCChhhHHHHHHHhhcCCeEEEEcC-cEEEEcCC
Q 024923 102 TLLVSLKVRYPQRITILRGNHESRQITQVY-GFYDECLRKYGNANVWKIFTDLFDYFPLTALVES-EIFCLHGG 173 (260)
Q Consensus 102 ~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~-~~l~vHgG 173 (260)
.++.++.... .+++++||||........ .+.......+.. .-..++.+ |....+++ +++++||-
T Consensus 322 ~~L~~L~~~i--~V~~ipGNHD~~~~~lPQ~~l~~~l~~~l~~-----~~v~~lsN-P~~i~l~G~~iLl~HG~ 387 (504)
T PRK04036 322 EYLKQIPEDI--KIIISPGNHDAVRQAEPQPAFPEEIRSLFPE-----HNVTFVSN-PALVNLHGVDVLIYHGR 387 (504)
T ss_pred HHHHhhhcCC--eEEEecCCCcchhhccCCCCccHHHHHhcCc-----CCeEEecC-CeEEEECCEEEEEECCC
Confidence 5666665433 499999999985432211 111111111110 01344444 65554554 78999995
No 52
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=98.15 E-value=4.5e-06 Score=73.25 Aligned_cols=72 Identities=22% Similarity=0.258 Sum_probs=49.7
Q ss_pred CceeEecCCCC-C-----------HHHHHHHHHHcCCCCCCceeeeeceecCCCCcHHHH----HHHHhcchhCCCcEEE
Q 024923 54 SPVTICGDIHG-Q-----------FHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETV----TLLVSLKVRYPQRITI 117 (260)
Q Consensus 54 ~~i~viGDIHG-~-----------~~~L~~ll~~~~~~~~~~~vflGD~vdrG~~s~evl----~~l~~lk~~~p~~v~~ 117 (260)
|+++.++|+|- . ...|.++++.+.....+.+|+.||++|+...+.+.. +++.+++...|-.+++
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~~ 80 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPIVV 80 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceEEE
Confidence 58999999993 2 234556666554455788899999999876555432 3444554433235999
Q ss_pred ECCCcchh
Q 024923 118 LRGNHESR 125 (260)
Q Consensus 118 lrGNHE~~ 125 (260)
+.||||..
T Consensus 81 i~GNHD~~ 88 (253)
T TIGR00619 81 ISGNHDSA 88 (253)
T ss_pred EccCCCCh
Confidence 99999985
No 53
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.14 E-value=5.4e-06 Score=73.17 Aligned_cols=72 Identities=18% Similarity=0.223 Sum_probs=48.2
Q ss_pred ceeEecCCC--C-----------CHHHHHHHHHHcCCCCCCceeeeeceecCCCC-cHHHHHHHHhcchhCCCcEEEECC
Q 024923 55 PVTICGDIH--G-----------QFHDLAELFRIGGKCPDTNYLFMGDYVDRGYY-SVETVTLLVSLKVRYPQRITILRG 120 (260)
Q Consensus 55 ~i~viGDIH--G-----------~~~~L~~ll~~~~~~~~~~~vflGD~vdrG~~-s~evl~~l~~lk~~~p~~v~~lrG 120 (260)
|++++||+| . ....|.++++.+.....+.+|++||+++.|.. +.+-++.+.+.-...+-.++++.|
T Consensus 2 r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~p~~~v~G 81 (267)
T cd07396 2 RFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRLKGPVHHVLG 81 (267)
T ss_pred eEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhcCCCEEEecC
Confidence 689999999 2 24567777877765557788899999998863 223333333222221223999999
Q ss_pred Ccchhh
Q 024923 121 NHESRQ 126 (260)
Q Consensus 121 NHE~~~ 126 (260)
|||...
T Consensus 82 NHD~~~ 87 (267)
T cd07396 82 NHDLYN 87 (267)
T ss_pred cccccc
Confidence 999864
No 54
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.03 E-value=7.9e-06 Score=64.33 Aligned_cols=56 Identities=20% Similarity=0.145 Sum_probs=41.4
Q ss_pred eEecCCCCCHHHHHHHHHHcCCCCCCceeeeeceecCCCCcHHHHHHHHhcchhCCCcEEEECCCcc
Q 024923 57 TICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHE 123 (260)
Q Consensus 57 ~viGDIHG~~~~L~~ll~~~~~~~~~~~vflGD~vdrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE 123 (260)
.|+||+||..+.+.++... ..+.+.++++||+. .+++..+.++. .. .+++++||||
T Consensus 1 ~viSDtH~~~~~~~~~~~~--~~~~d~ii~~GD~~------~~~~~~~~~~~-~~--~~~~V~GN~D 56 (129)
T cd07403 1 LVISDTESPALYSPEIKVR--LEGVDLILSAGDLP------KEYLEYLVTML-NV--PVYYVHGNHD 56 (129)
T ss_pred CeeccccCccccchHHHhh--CCCCCEEEECCCCC------hHHHHHHHHHc-CC--CEEEEeCCCc
Confidence 4899999998877776665 35678899999984 34566666542 12 3899999999
No 55
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=98.02 E-value=8.8e-06 Score=70.10 Aligned_cols=67 Identities=25% Similarity=0.295 Sum_probs=46.7
Q ss_pred ceeEecCCCCC------------HHHHHHHHHHcCCC--CCCceeeeeceecCCCC-cH-HHHHHHHhcchhCCCcEEEE
Q 024923 55 PVTICGDIHGQ------------FHDLAELFRIGGKC--PDTNYLFMGDYVDRGYY-SV-ETVTLLVSLKVRYPQRITIL 118 (260)
Q Consensus 55 ~i~viGDIHG~------------~~~L~~ll~~~~~~--~~~~~vflGD~vdrG~~-s~-evl~~l~~lk~~~p~~v~~l 118 (260)
|++++||+|=. ...|+++++.+... +.+-+|++||+++.|.. .. .+.+.+.++. -.++++
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~~~----~p~~~v 76 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGSPESYERLRELLAALP----IPVYLL 76 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCCHHHHHHHHHHHhhcC----CCEEEe
Confidence 58999999954 34577777766543 56778899999998653 22 2334444442 238999
Q ss_pred CCCcchh
Q 024923 119 RGNHESR 125 (260)
Q Consensus 119 rGNHE~~ 125 (260)
+||||..
T Consensus 77 ~GNHD~~ 83 (240)
T cd07402 77 PGNHDDR 83 (240)
T ss_pred CCCCCCH
Confidence 9999974
No 56
>PHA02546 47 endonuclease subunit; Provisional
Probab=97.99 E-value=1.1e-05 Score=73.76 Aligned_cols=71 Identities=23% Similarity=0.336 Sum_probs=48.4
Q ss_pred CceeEecCCC-C-----------CHHHHHHHHHHcCCCCCCceeeeeceecCC-CCcHHHHHHHHh-----cchhCCCcE
Q 024923 54 SPVTICGDIH-G-----------QFHDLAELFRIGGKCPDTNYLFMGDYVDRG-YYSVETVTLLVS-----LKVRYPQRI 115 (260)
Q Consensus 54 ~~i~viGDIH-G-----------~~~~L~~ll~~~~~~~~~~~vflGD~vdrG-~~s~evl~~l~~-----lk~~~p~~v 115 (260)
||++.+||+| | ....|.++++.+...+.+.+|++||++|+. +.+.+++.++.. ++ ..+-.+
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~-~~gi~v 79 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLK-EAGITL 79 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHH-HCCCeE
Confidence 5899999999 4 234556666666555678899999999985 445555444332 22 223359
Q ss_pred EEECCCcchh
Q 024923 116 TILRGNHESR 125 (260)
Q Consensus 116 ~~lrGNHE~~ 125 (260)
++|.||||..
T Consensus 80 ~~I~GNHD~~ 89 (340)
T PHA02546 80 HVLVGNHDMY 89 (340)
T ss_pred EEEccCCCcc
Confidence 9999999974
No 57
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=97.99 E-value=3e-05 Score=68.44 Aligned_cols=69 Identities=16% Similarity=0.236 Sum_probs=44.3
Q ss_pred eeEecCCCCCHHHHHHHHHHc---CCCCCCceeeeeceecCCCCc-HHHH-------------HHHHhcchhCCCcEEEE
Q 024923 56 VTICGDIHGQFHDLAELFRIG---GKCPDTNYLFMGDYVDRGYYS-VETV-------------TLLVSLKVRYPQRITIL 118 (260)
Q Consensus 56 i~viGDIHG~~~~L~~ll~~~---~~~~~~~~vflGD~vdrG~~s-~evl-------------~~l~~lk~~~p~~v~~l 118 (260)
|+|+||+||+++.+.+.++.. ...+.+.+|++||+-..+..+ .+.+ .++... ...|--+++|
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~-~~~p~~t~fi 79 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGE-KKAPILTIFI 79 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCC-ccCCeeEEEE
Confidence 689999999999997755433 234567788999996443322 2221 122212 2244447999
Q ss_pred CCCcchh
Q 024923 119 RGNHESR 125 (260)
Q Consensus 119 rGNHE~~ 125 (260)
.||||..
T Consensus 80 ~GNHE~~ 86 (262)
T cd00844 80 GGNHEAS 86 (262)
T ss_pred CCCCCCH
Confidence 9999974
No 58
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.91 E-value=3.1e-05 Score=63.83 Aligned_cols=57 Identities=18% Similarity=0.193 Sum_probs=34.0
Q ss_pred HHHHHHHcCCCCCCceeeeeceecCCCCc-HHHHHH--HHhcchhCCCcEEEECCCcchhh
Q 024923 69 LAELFRIGGKCPDTNYLFMGDYVDRGYYS-VETVTL--LVSLKVRYPQRITILRGNHESRQ 126 (260)
Q Consensus 69 L~~ll~~~~~~~~~~~vflGD~vdrG~~s-~evl~~--l~~lk~~~p~~v~~lrGNHE~~~ 126 (260)
+.++.+.+...+.+.+|++||+++....+ .+.... +..+. ..+-.+++++||||...
T Consensus 30 ~~~l~~~~~~~~~d~lii~GDl~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~i~GNHD~~~ 89 (172)
T cd07391 30 LERLDRLIEEYGPERLIILGDLKHSFGGLSRQEFEEVAFLRLL-AKDVDVILIRGNHDGGL 89 (172)
T ss_pred HHHHHHHHHhcCCCEEEEeCcccccccccCHHHHHHHHHHHhc-cCCCeEEEEcccCccch
Confidence 44455555445678899999999864432 222221 12221 22335999999999853
No 59
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=97.89 E-value=2.2e-05 Score=62.28 Aligned_cols=68 Identities=21% Similarity=0.249 Sum_probs=43.3
Q ss_pred eeEecCCCCCHH------H----HHHHHHHcCCCCCCceeeeeceecCCCCc--HHHHHHHHhcchhCCCcEEEECCCcc
Q 024923 56 VTICGDIHGQFH------D----LAELFRIGGKCPDTNYLFMGDYVDRGYYS--VETVTLLVSLKVRYPQRITILRGNHE 123 (260)
Q Consensus 56 i~viGDIHG~~~------~----L~~ll~~~~~~~~~~~vflGD~vdrG~~s--~evl~~l~~lk~~~p~~v~~lrGNHE 123 (260)
|+.++|+|=... . |.++++.+...+.+.++++||+++.|... ....+++..++... ..+++++||||
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~GNHD 79 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQRGLPEEFEEAREFLDALPAPL-EPVLVVPGNHD 79 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCCCCHHHHHHHHHHHHHccccC-CcEEEeCCCCe
Confidence 467899993221 1 22345555555678889999999987642 13345555555321 14999999999
Q ss_pred h
Q 024923 124 S 124 (260)
Q Consensus 124 ~ 124 (260)
.
T Consensus 80 ~ 80 (144)
T cd07400 80 V 80 (144)
T ss_pred E
Confidence 7
No 60
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=97.84 E-value=2.8e-05 Score=65.91 Aligned_cols=72 Identities=25% Similarity=0.253 Sum_probs=48.5
Q ss_pred ceeEecCCC-CCH--------------HHHHHHHHHcCCCCCCceeeeeceecCCCCcHHHHH----HHHhcchhCCCcE
Q 024923 55 PVTICGDIH-GQF--------------HDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVT----LLVSLKVRYPQRI 115 (260)
Q Consensus 55 ~i~viGDIH-G~~--------------~~L~~ll~~~~~~~~~~~vflGD~vdrG~~s~evl~----~l~~lk~~~p~~v 115 (260)
|++.++|+| |.. ..|.++++.+...+.+.+|++||+++....+.+.+. .+.+++. .+-.+
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v 79 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKE-AGIPV 79 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHH-CCCCE
Confidence 578999999 322 236667766655566788999999998765544333 3333421 12249
Q ss_pred EEECCCcchhhh
Q 024923 116 TILRGNHESRQI 127 (260)
Q Consensus 116 ~~lrGNHE~~~~ 127 (260)
+++.||||....
T Consensus 80 ~~~~GNHD~~~~ 91 (223)
T cd00840 80 FIIAGNHDSPSR 91 (223)
T ss_pred EEecCCCCCccc
Confidence 999999998654
No 61
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=97.83 E-value=3.4e-05 Score=68.35 Aligned_cols=71 Identities=13% Similarity=0.076 Sum_probs=46.4
Q ss_pred cCceeEecCCC-C-----------CHHHHHHHHHHcCC--CCCCceeeeeceecCCCCcHHHHHHHHhcchhCCCcEEEE
Q 024923 53 KSPVTICGDIH-G-----------QFHDLAELFRIGGK--CPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITIL 118 (260)
Q Consensus 53 ~~~i~viGDIH-G-----------~~~~L~~ll~~~~~--~~~~~~vflGD~vdrG~~s~evl~~l~~lk~~~p~~v~~l 118 (260)
.++++.|+|+| . ....|.++++.+.. ++.+-+|+.||+++.|. .+-...+.+.-...+..++++
T Consensus 14 ~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~--~~~~~~~~~~l~~l~~Pv~~v 91 (275)
T PRK11148 14 RVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHS--SEAYQHFAEGIAPLRKPCVWL 91 (275)
T ss_pred CEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC--HHHHHHHHHHHhhcCCcEEEe
Confidence 46899999999 1 24667788877643 23577889999999774 222222222112222349999
Q ss_pred CCCcchh
Q 024923 119 RGNHESR 125 (260)
Q Consensus 119 rGNHE~~ 125 (260)
.||||..
T Consensus 92 ~GNHD~~ 98 (275)
T PRK11148 92 PGNHDFQ 98 (275)
T ss_pred CCCCCCh
Confidence 9999973
No 62
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.81 E-value=4.9e-05 Score=65.62 Aligned_cols=69 Identities=17% Similarity=0.195 Sum_probs=45.1
Q ss_pred CceeEecCCC-CCHHHH----------------HHHHHHcCCCCCCceeeeeceecCCCC---cHHHHHHHHhcchhCCC
Q 024923 54 SPVTICGDIH-GQFHDL----------------AELFRIGGKCPDTNYLFMGDYVDRGYY---SVETVTLLVSLKVRYPQ 113 (260)
Q Consensus 54 ~~i~viGDIH-G~~~~L----------------~~ll~~~~~~~~~~~vflGD~vdrG~~---s~evl~~l~~lk~~~p~ 113 (260)
.+..||+|+| |--..+ .++.+.+...+.+.+|++||+.+.... ..++.+++..+. .
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~~----~ 90 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVTF----R 90 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhcC----C
Confidence 5789999999 643332 233333344456889999999975443 233344554443 2
Q ss_pred cEEEECCCcchhh
Q 024923 114 RITILRGNHESRQ 126 (260)
Q Consensus 114 ~v~~lrGNHE~~~ 126 (260)
.+++++||||...
T Consensus 91 ~v~~V~GNHD~~~ 103 (225)
T TIGR00024 91 DLILIRGNHDALI 103 (225)
T ss_pred cEEEECCCCCCcc
Confidence 5999999999853
No 63
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=97.79 E-value=6.3e-05 Score=63.74 Aligned_cols=69 Identities=23% Similarity=0.251 Sum_probs=38.1
Q ss_pred eEecCCC---CCHHH---HHHHHHHcCCCCCCceeeeeceecC--CC-----Cc-HHHHHHHHhcchhCCCcEEEECCCc
Q 024923 57 TICGDIH---GQFHD---LAELFRIGGKCPDTNYLFMGDYVDR--GY-----YS-VETVTLLVSLKVRYPQRITILRGNH 122 (260)
Q Consensus 57 ~viGDIH---G~~~~---L~~ll~~~~~~~~~~~vflGD~vdr--G~-----~s-~evl~~l~~lk~~~p~~v~~lrGNH 122 (260)
++|||+| +.... +..+++.....+.+.+|++||++|. ++ .. .+.+..+.++.. ....++.+.|||
T Consensus 1 ~~iSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~v~~v~GNH 79 (217)
T cd07398 1 LFISDLHLGDGGPAADFLLLFLLAALALGEADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLAD-RGTRVYYVPGNH 79 (217)
T ss_pred CEeeeecCCCCCCCHHHHHHHHHhhhccCCCCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHHH-CCCeEEEECCCc
Confidence 5899999 22222 2222222211356889999999984 11 11 122223333221 234699999999
Q ss_pred chhh
Q 024923 123 ESRQ 126 (260)
Q Consensus 123 E~~~ 126 (260)
|...
T Consensus 80 D~~~ 83 (217)
T cd07398 80 DFLL 83 (217)
T ss_pred hHHH
Confidence 9864
No 64
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=97.78 E-value=4.2e-05 Score=65.34 Aligned_cols=69 Identities=19% Similarity=0.204 Sum_probs=43.7
Q ss_pred ceeEecCCCC----CHHHH----HHHHHHcCCCCCCceeeeeceecCCCCcH---HHHHHHHhcc-hhCCCcEEEECCCc
Q 024923 55 PVTICGDIHG----QFHDL----AELFRIGGKCPDTNYLFMGDYVDRGYYSV---ETVTLLVSLK-VRYPQRITILRGNH 122 (260)
Q Consensus 55 ~i~viGDIHG----~~~~L----~~ll~~~~~~~~~~~vflGD~vdrG~~s~---evl~~l~~lk-~~~p~~v~~lrGNH 122 (260)
+++++||+|- ....+ ..+.+.+...+.+.+|++||+++.+.... ...+.+..+. ...| +++++|||
T Consensus 2 ~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~~~~p--~~~~~GNH 79 (214)
T cd07399 2 TLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLDKAGIP--YSVLAGNH 79 (214)
T ss_pred EEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHHHcCCc--EEEECCCC
Confidence 6899999995 22333 33444444345677889999999987432 2233333443 2244 88999999
Q ss_pred chh
Q 024923 123 ESR 125 (260)
Q Consensus 123 E~~ 125 (260)
|..
T Consensus 80 D~~ 82 (214)
T cd07399 80 DLV 82 (214)
T ss_pred cch
Confidence 953
No 65
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms]
Probab=97.74 E-value=3.1e-05 Score=60.64 Aligned_cols=110 Identities=46% Similarity=0.824 Sum_probs=81.0
Q ss_pred hhhhcchHHHHHHhCChhhHHH---HHHHhhcCCeEEEEcC-cEEEEcCCCCCCC-CcHHHHhcccccc--cCCCCCCcc
Q 024923 128 TQVYGFYDECLRKYGNANVWKI---FTDLFDYFPLTALVES-EIFCLHGGLSPSI-ETLDNIRNFDRVQ--EVPHEGPMC 200 (260)
Q Consensus 128 ~~~~~~~~e~~~~~~~~~~~~~---~~~~~~~lP~~~~i~~-~~l~vHgGi~~~~-~~~~~~~~~~r~~--~~~~~~~~~ 200 (260)
+..+++..++...++....|.. ..++++.+|+.....+ .++|.|+++++.. ....+++...|.. ..+..+...
T Consensus 4 ~~~~~~~~~~~~~~~~~~~w~~~~g~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~ 83 (155)
T COG0639 4 TALYGFYDEKLRKYGEELEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGLDRLLDIIEVLDRLRACEVPHAGHTH 83 (155)
T ss_pred hhhhchhHHhhhhcCCceeeeeccchhhHHHhhhHHHHhcCCceeeecCCCCcchhhhHHHHHHHhhhhcccCCCccccc
Confidence 3445556665555544334544 8999999999988777 8899999999875 6677777777766 677777788
Q ss_pred ccccCCCCC--CCCCCcCCCCCcEEEcCCchHHHHHHhhCCC
Q 024923 201 DLLWSDPDD--RCGWGISPRGAGYTFGQVNTIALSFRHCMSP 240 (260)
Q Consensus 201 ~llWsdp~~--~~~~~~~~rg~~~~fGh~h~~~~~f~~~n~~ 240 (260)
+.+|+++.. ...|.+.++|....+ ++ ++..|...+..
T Consensus 84 ~~~~~~~~~~~~~~w~~~~~g~~~~~-~~--~~~~f~~~~~~ 122 (155)
T COG0639 84 DLLWSDPDGGDRRIWNPGPRGVPRDG-GD--VTAVFGIVHTP 122 (155)
T ss_pred cccCCCCCCCcccccccCCCCCCccc-cc--hhhHHhhhccc
Confidence 889999884 678888888887666 66 77777755544
No 66
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=97.74 E-value=4e-05 Score=62.34 Aligned_cols=49 Identities=20% Similarity=0.255 Sum_probs=30.3
Q ss_pred CCCCCceeeeeceecCCCCcH-H----HHHHHHhcchhC-CCcEEEECCCcchhh
Q 024923 78 KCPDTNYLFMGDYVDRGYYSV-E----TVTLLVSLKVRY-PQRITILRGNHESRQ 126 (260)
Q Consensus 78 ~~~~~~~vflGD~vdrG~~s~-e----vl~~l~~lk~~~-p~~v~~lrGNHE~~~ 126 (260)
..+.+.+|++||+++.+..+. + .+..+.++.... +-.++++.||||...
T Consensus 36 ~~~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~~ 90 (156)
T cd08165 36 LLQPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIGF 90 (156)
T ss_pred hcCCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcCC
Confidence 345678999999999875422 2 223233322111 234999999999853
No 67
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=97.69 E-value=9.5e-05 Score=62.22 Aligned_cols=70 Identities=16% Similarity=0.083 Sum_probs=43.3
Q ss_pred CceeEecCCCCCHH------------HHHHHHHHcCCCCCCceeeeeceecCCCCc---HHHHHHHHhcchhCCCcEEEE
Q 024923 54 SPVTICGDIHGQFH------------DLAELFRIGGKCPDTNYLFMGDYVDRGYYS---VETVTLLVSLKVRYPQRITIL 118 (260)
Q Consensus 54 ~~i~viGDIHG~~~------------~L~~ll~~~~~~~~~~~vflGD~vdrG~~s---~evl~~l~~lk~~~p~~v~~l 118 (260)
.++++++|+|-... .+..+.+.+...+.+.+|++||+++.+... .+.+..+.+......-.++++
T Consensus 3 ~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~ 82 (199)
T cd07383 3 FKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWAAT 82 (199)
T ss_pred eEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEEEE
Confidence 47999999996332 122222233334567899999999876653 445554443222222238999
Q ss_pred CCCcc
Q 024923 119 RGNHE 123 (260)
Q Consensus 119 rGNHE 123 (260)
.||||
T Consensus 83 ~GNHD 87 (199)
T cd07383 83 FGNHD 87 (199)
T ss_pred CccCC
Confidence 99999
No 68
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=97.66 E-value=7.6e-05 Score=64.55 Aligned_cols=65 Identities=20% Similarity=0.273 Sum_probs=40.6
Q ss_pred eeEecCCCCC---------H-----HHHHHHHHHcCC--CCCCceeeeeceecCCCCc--HHHHHHHHhcchhCCCcEEE
Q 024923 56 VTICGDIHGQ---------F-----HDLAELFRIGGK--CPDTNYLFMGDYVDRGYYS--VETVTLLVSLKVRYPQRITI 117 (260)
Q Consensus 56 i~viGDIHG~---------~-----~~L~~ll~~~~~--~~~~~~vflGD~vdrG~~s--~evl~~l~~lk~~~p~~v~~ 117 (260)
|++++|+|-. + +.+.++.+.+.. ++.+.+|+.||++++++.. .+.+..+.++ |..+++
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~~~~~~~~l~~l~~l----~~~v~~ 76 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMKLEEAKLDLAWIDAL----PGTKVL 76 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCChHHHHHHHHHHHhC----CCCeEE
Confidence 5789999955 1 223333333221 3567788999999876532 2334444443 223899
Q ss_pred ECCCcch
Q 024923 118 LRGNHES 124 (260)
Q Consensus 118 lrGNHE~ 124 (260)
+.||||.
T Consensus 77 V~GNHD~ 83 (232)
T cd07393 77 LKGNHDY 83 (232)
T ss_pred EeCCccc
Confidence 9999997
No 69
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=97.66 E-value=0.00011 Score=68.60 Aligned_cols=54 Identities=15% Similarity=0.192 Sum_probs=43.0
Q ss_pred cCceeEecCCCCC------------HHHHHHHHHHcCCCCCCceeeeeceecCCCCcHHHHHHHHh
Q 024923 53 KSPVTICGDIHGQ------------FHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVS 106 (260)
Q Consensus 53 ~~~i~viGDIHG~------------~~~L~~ll~~~~~~~~~~~vflGD~vdrG~~s~evl~~l~~ 106 (260)
.+||++++|+|-- +..|.++++.+.....+-+|+.||+.|+..-|.+++..+++
T Consensus 3 ~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~ 68 (405)
T TIGR00583 3 TIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLR 68 (405)
T ss_pred ceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHH
Confidence 4689999999942 55778888887666778899999999999988887755443
No 70
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=97.64 E-value=0.00015 Score=63.74 Aligned_cols=73 Identities=21% Similarity=0.274 Sum_probs=51.1
Q ss_pred CceeEecCCCCC------HHHHHHHHHHcCCCCCCceeeeeceecCCCCcHHHHHHHHhcch--hCCCcEEEECCCcchh
Q 024923 54 SPVTICGDIHGQ------FHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKV--RYPQRITILRGNHESR 125 (260)
Q Consensus 54 ~~i~viGDIHG~------~~~L~~ll~~~~~~~~~~~vflGD~vdrG~~s~evl~~l~~lk~--~~p~~v~~lrGNHE~~ 125 (260)
++++.|+|+|-. ...+.++++.+...+.+.+|+.||+.+.|. .+-.+.+.++-. ..|..++.++||||.+
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~~~--~~~~~~~~~~l~~~~~~~~~~~vpGNHD~~ 78 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTNDGE--PEEYRRLKELLARLELPAPVIVVPGNHDAR 78 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCCCC--HHHHHHHHHHHhhccCCCceEeeCCCCcCC
Confidence 478999999987 345666778887666788999999999853 222222222222 3455699999999997
Q ss_pred hhh
Q 024923 126 QIT 128 (260)
Q Consensus 126 ~~~ 128 (260)
..+
T Consensus 79 ~~~ 81 (301)
T COG1409 79 VVN 81 (301)
T ss_pred chH
Confidence 654
No 71
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=97.54 E-value=0.00021 Score=61.01 Aligned_cols=71 Identities=20% Similarity=0.290 Sum_probs=54.6
Q ss_pred cCceeEecCCCCCHHHHHHHHHHcCCCCCCceeeeecee--cCCCCcHHH----HHHHHhcchhCCCcEEEECCCcchhh
Q 024923 53 KSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYV--DRGYYSVET----VTLLVSLKVRYPQRITILRGNHESRQ 126 (260)
Q Consensus 53 ~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vflGD~v--drG~~s~ev----l~~l~~lk~~~p~~v~~lrGNHE~~~ 126 (260)
.+++..++|+||.++.+.++++.......+.+++.||+. +.|+.-... ++.+.+.. -.++.++||.|...
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~~~~~~~~~e~l~~~~----~~v~avpGNcD~~~ 78 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFGPKEVAEELNKLEALKELG----IPVLAVPGNCDPPE 78 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcCchHHHHhhhHHHHHHhcC----CeEEEEcCCCChHH
Confidence 579999999999999999999988766678888999999 877643222 23333333 24999999999865
Q ss_pred h
Q 024923 127 I 127 (260)
Q Consensus 127 ~ 127 (260)
+
T Consensus 79 v 79 (226)
T COG2129 79 V 79 (226)
T ss_pred H
Confidence 4
No 72
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=97.53 E-value=0.00018 Score=64.15 Aligned_cols=73 Identities=19% Similarity=0.135 Sum_probs=51.7
Q ss_pred cCceeEecCCCCCHHHH--HHHHHHcCCCCCCceeeeeceecC--CCCcHHHHHHHHhcchhCCCcEEEECCCcchhhh
Q 024923 53 KSPVTICGDIHGQFHDL--AELFRIGGKCPDTNYLFMGDYVDR--GYYSVETVTLLVSLKVRYPQRITILRGNHESRQI 127 (260)
Q Consensus 53 ~~~i~viGDIHG~~~~L--~~ll~~~~~~~~~~~vflGD~vdr--G~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~ 127 (260)
..+|+-++|+|-+.... .+.+..+.....+-+++.|||+|+ -+....++..+..|+...| ++++.||||...-
T Consensus 44 ~~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~~~~~~~~~~~~L~~L~~~~g--v~av~GNHd~~~~ 120 (284)
T COG1408 44 GLKIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGDRPPGVAALALFLAKLKAPLG--VFAVLGNHDYGVD 120 (284)
T ss_pred CeEEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCCCCCCHHHHHHHHHhhhccCC--EEEEecccccccc
Confidence 34799999999887762 223333333333778899999995 4445557777888886655 9999999998643
No 73
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=97.51 E-value=0.00022 Score=62.53 Aligned_cols=69 Identities=14% Similarity=0.036 Sum_probs=43.8
Q ss_pred ceeEecCCCCCH----------------HHHHHHHHHcCCC--CCCceeeeeceecCCCCcH-------HHHHHHHhcch
Q 024923 55 PVTICGDIHGQF----------------HDLAELFRIGGKC--PDTNYLFMGDYVDRGYYSV-------ETVTLLVSLKV 109 (260)
Q Consensus 55 ~i~viGDIHG~~----------------~~L~~ll~~~~~~--~~~~~vflGD~vdrG~~s~-------evl~~l~~lk~ 109 (260)
+++++||+|--. ..|.++++.+... ..+.+|++||+++.|.... +..+.+.++..
T Consensus 6 ~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (262)
T cd07395 6 YFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSLLDP 85 (262)
T ss_pred EEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhhccC
Confidence 678899998764 1345566665432 4567889999999876542 12222222211
Q ss_pred hCCCcEEEECCCcchh
Q 024923 110 RYPQRITILRGNHESR 125 (260)
Q Consensus 110 ~~p~~v~~lrGNHE~~ 125 (260)
+-.++.+.||||..
T Consensus 86 --~vp~~~i~GNHD~~ 99 (262)
T cd07395 86 --DIPLVCVCGNHDVG 99 (262)
T ss_pred --CCcEEEeCCCCCCC
Confidence 22499999999974
No 74
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=97.51 E-value=0.00015 Score=67.89 Aligned_cols=71 Identities=25% Similarity=0.339 Sum_probs=46.7
Q ss_pred CceeEecCCC-CC-H------HH----HHHHHHHcCCCCCCceeeeeceecCCCCcHHHH----HHHHhcchhCCCcEEE
Q 024923 54 SPVTICGDIH-GQ-F------HD----LAELFRIGGKCPDTNYLFMGDYVDRGYYSVETV----TLLVSLKVRYPQRITI 117 (260)
Q Consensus 54 ~~i~viGDIH-G~-~------~~----L~~ll~~~~~~~~~~~vflGD~vdrG~~s~evl----~~l~~lk~~~p~~v~~ 117 (260)
|+++.++|+| |. + .+ |..+.+.+.....+.+|+.||++|++..+.... .++..++.. +-.+++
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~~-~~~v~~ 79 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQT-GCQLVV 79 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHhc-CCcEEE
Confidence 5899999999 32 1 11 344555555556788999999999976554332 333444432 224999
Q ss_pred ECCCcchh
Q 024923 118 LRGNHESR 125 (260)
Q Consensus 118 lrGNHE~~ 125 (260)
+.||||..
T Consensus 80 I~GNHD~~ 87 (407)
T PRK10966 80 LAGNHDSV 87 (407)
T ss_pred EcCCCCCh
Confidence 99999975
No 75
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.51 E-value=0.00023 Score=62.55 Aligned_cols=70 Identities=19% Similarity=0.065 Sum_probs=43.0
Q ss_pred eeEecCCCCCHH------HH-HHHHHHcCCCCCCceeeeeceecCCCCc-------H----HHHHHHHhcchhCCCcEEE
Q 024923 56 VTICGDIHGQFH------DL-AELFRIGGKCPDTNYLFMGDYVDRGYYS-------V----ETVTLLVSLKVRYPQRITI 117 (260)
Q Consensus 56 i~viGDIHG~~~------~L-~~ll~~~~~~~~~~~vflGD~vdrG~~s-------~----evl~~l~~lk~~~p~~v~~ 117 (260)
++.++|+|-... .. ..+++.+...+.+.+|++||++|++... . +.++.+.......+..++.
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 81 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWFD 81 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEEE
Confidence 578999996322 12 3345555555677889999999976521 1 2233333322222345899
Q ss_pred ECCCcchh
Q 024923 118 LRGNHESR 125 (260)
Q Consensus 118 lrGNHE~~ 125 (260)
++||||..
T Consensus 82 v~GNHD~~ 89 (256)
T cd07401 82 IRGNHDLF 89 (256)
T ss_pred eCCCCCcC
Confidence 99999995
No 76
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=97.49 E-value=0.00016 Score=62.95 Aligned_cols=68 Identities=21% Similarity=0.281 Sum_probs=41.0
Q ss_pred eEecCCC--CCH---HHHHHHHHHcCCC-----CCCceeeeeceecCCC-----C----------c-HHHHHHHHhcchh
Q 024923 57 TICGDIH--GQF---HDLAELFRIGGKC-----PDTNYLFMGDYVDRGY-----Y----------S-VETVTLLVSLKVR 110 (260)
Q Consensus 57 ~viGDIH--G~~---~~L~~ll~~~~~~-----~~~~~vflGD~vdrG~-----~----------s-~evl~~l~~lk~~ 110 (260)
++|||+| +.. ..+..+++.+... ..+.+|++||++|+.. . . ..+..++.++...
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~ 81 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVPSH 81 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcccC
Confidence 6899999 332 2334444433221 2377889999999731 0 0 1244455555533
Q ss_pred CCCcEEEECCCcchhh
Q 024923 111 YPQRITILRGNHESRQ 126 (260)
Q Consensus 111 ~p~~v~~lrGNHE~~~ 126 (260)
. .++++.||||...
T Consensus 82 ~--~v~~ipGNHD~~~ 95 (243)
T cd07386 82 I--KIIIIPGNHDAVR 95 (243)
T ss_pred C--eEEEeCCCCCccc
Confidence 3 4999999999853
No 77
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=97.48 E-value=9.3e-05 Score=65.77 Aligned_cols=69 Identities=20% Similarity=0.223 Sum_probs=43.2
Q ss_pred CceeEecCCCC----CHHHHHHHHHHcCCCCCCceeeeeceecCCCCc-----HHHHHHHHhcchhCCCcEEEECCCcch
Q 024923 54 SPVTICGDIHG----QFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYS-----VETVTLLVSLKVRYPQRITILRGNHES 124 (260)
Q Consensus 54 ~~i~viGDIHG----~~~~L~~ll~~~~~~~~~~~vflGD~vdrG~~s-----~evl~~l~~lk~~~p~~v~~lrGNHE~ 124 (260)
-+++|+||.|. ....+.++.+. ..+.+-+|++||+++.+... -..+..+..+....| ++.++||||.
T Consensus 5 ~~f~v~gD~~~~~~~~~~~~~~l~~~--~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~P--~~~~~GNHD~ 80 (294)
T cd00839 5 FKFAVFGDMGQNTNNSTNTLDHLEKE--LGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASYVP--YMVTPGNHEA 80 (294)
T ss_pred EEEEEEEECCCCCCCcHHHHHHHHhc--cCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhcCC--cEEcCccccc
Confidence 47999999995 23333333333 23456788999999644322 223333444434456 8999999998
Q ss_pred hh
Q 024923 125 RQ 126 (260)
Q Consensus 125 ~~ 126 (260)
..
T Consensus 81 ~~ 82 (294)
T cd00839 81 DY 82 (294)
T ss_pred cc
Confidence 64
No 78
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=97.11 E-value=0.00074 Score=56.92 Aligned_cols=49 Identities=18% Similarity=0.316 Sum_probs=34.8
Q ss_pred CCCCCCceeeeeceecCCCCcH--HHHHHHHhcchhCC----CcEEEECCCcchh
Q 024923 77 GKCPDTNYLFMGDYVDRGYYSV--ETVTLLVSLKVRYP----QRITILRGNHESR 125 (260)
Q Consensus 77 ~~~~~~~~vflGD~vdrG~~s~--evl~~l~~lk~~~p----~~v~~lrGNHE~~ 125 (260)
.....+-+||+||++|.|+.+. +..+.+.+++..++ ..+++|.||||.-
T Consensus 39 ~~l~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 39 NFVQPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred hccCCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 3345688999999999999643 36666666554321 2588999999974
No 79
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=97.09 E-value=0.0013 Score=53.28 Aligned_cols=66 Identities=24% Similarity=0.367 Sum_probs=46.9
Q ss_pred eEecCCCCCHHHHHHHHHHcCC--CCCCceeeeeceecCCCCcHHHHHHHHhcchhCCCcEEEECCCcc
Q 024923 57 TICGDIHGQFHDLAELFRIGGK--CPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHE 123 (260)
Q Consensus 57 ~viGDIHG~~~~L~~ll~~~~~--~~~~~~vflGD~vdrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE 123 (260)
.|+||+||+++.+.+-++++.. .+-+.+|++||+..-...+-+ +.....=.+..|--.+++-||||
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~-~~~y~~g~~~~pipTyf~ggn~~ 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDEDDEE-LEAYKDGSKKVPIPTYFLGGNNP 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCccchhh-HHHHhcCCccCCCCEEEECCCCC
Confidence 4899999999999887776432 345778899999875555433 33333333445556999999998
No 80
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=97.06 E-value=0.0017 Score=52.35 Aligned_cols=67 Identities=19% Similarity=0.209 Sum_probs=43.7
Q ss_pred ceeEecCCCC------------CHHHHHH-HHHHcC--CCCCCceeeeeceecCCCCcHHHHHHHHhcchhCCCcEEEEC
Q 024923 55 PVTICGDIHG------------QFHDLAE-LFRIGG--KCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILR 119 (260)
Q Consensus 55 ~i~viGDIHG------------~~~~L~~-ll~~~~--~~~~~~~vflGD~vdrG~~s~evl~~l~~lk~~~p~~v~~lr 119 (260)
.++.+||+|= +.+.... ++.... ..|.+.+.+|||+.-.--...+..+.+.+| |++.++++
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~~~a~~IlerL----nGrkhlv~ 80 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRERAAGLILERL----NGRKHLVP 80 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccchhhHHHHHHHHc----CCcEEEee
Confidence 4788999984 3344433 233221 246677889999986544445555555555 46799999
Q ss_pred CCcchh
Q 024923 120 GNHESR 125 (260)
Q Consensus 120 GNHE~~ 125 (260)
||||-.
T Consensus 81 GNhDk~ 86 (186)
T COG4186 81 GNHDKC 86 (186)
T ss_pred CCCCCC
Confidence 999985
No 81
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=97.04 E-value=0.00095 Score=58.01 Aligned_cols=66 Identities=27% Similarity=0.331 Sum_probs=45.2
Q ss_pred ceeEecCCCCCH---------HHHHHHHHHcCCCCCC-ceeeeeceecCCCCcH-----HHHHHHHhcchhCCCcEEEEC
Q 024923 55 PVTICGDIHGQF---------HDLAELFRIGGKCPDT-NYLFMGDYVDRGYYSV-----ETVTLLVSLKVRYPQRITILR 119 (260)
Q Consensus 55 ~i~viGDIHG~~---------~~L~~ll~~~~~~~~~-~~vflGD~vdrG~~s~-----evl~~l~~lk~~~p~~v~~lr 119 (260)
+++.++|+||.+ ..+.++++++.....+ .++..||+++..+.+. .+++.+..+.. -++..
T Consensus 2 ~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~g~-----d~~~~ 76 (252)
T cd00845 2 TILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPSTATKGEANIELMNALGY-----DAVTI 76 (252)
T ss_pred EEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchhccCCcHHHHHHHhcCC-----CEEee
Confidence 689999999887 5666777776544344 4567999999877543 45666655531 23556
Q ss_pred CCcchh
Q 024923 120 GNHESR 125 (260)
Q Consensus 120 GNHE~~ 125 (260)
||||.-
T Consensus 77 GNHe~d 82 (252)
T cd00845 77 GNHEFD 82 (252)
T ss_pred cccccc
Confidence 999973
No 82
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.03 E-value=0.0035 Score=54.03 Aligned_cols=67 Identities=19% Similarity=0.257 Sum_probs=42.0
Q ss_pred eEecCCCCC------HHHHHHHHHHcCCCCCCceeeeeceecC--CCC-----cHHHHHHHHhcchhCCCcEEEECCCcc
Q 024923 57 TICGDIHGQ------FHDLAELFRIGGKCPDTNYLFMGDYVDR--GYY-----SVETVTLLVSLKVRYPQRITILRGNHE 123 (260)
Q Consensus 57 ~viGDIHG~------~~~L~~ll~~~~~~~~~~~vflGD~vdr--G~~-----s~evl~~l~~lk~~~p~~v~~lrGNHE 123 (260)
+.|||+|=. .+.|.+.|+... +..+.+.++||++|- |.+ -.+|...|..+.. ...+++++.||||
T Consensus 1 lFISDlHL~~~~p~~t~~fl~Fl~~~a-~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~a~-~G~~v~~i~GN~D 78 (237)
T COG2908 1 LFISDLHLGPKRPALTAFFLDFLREEA-AQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRLAR-KGTRVYYIHGNHD 78 (237)
T ss_pred CeeeccccCCCCcHHHHHHHHHHHhcc-ccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHHHh-cCCeEEEecCchH
Confidence 368999954 233445555433 244678889999862 332 2345666665543 3357999999999
Q ss_pred hh
Q 024923 124 SR 125 (260)
Q Consensus 124 ~~ 125 (260)
..
T Consensus 79 fl 80 (237)
T COG2908 79 FL 80 (237)
T ss_pred HH
Confidence 54
No 83
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=97.00 E-value=0.00051 Score=58.83 Aligned_cols=73 Identities=16% Similarity=0.215 Sum_probs=43.5
Q ss_pred cCceeEecCCCCCHHHHHHHHHHcCCCCCCceeeeeceecCCCCcHHHH--------------------------HHHHh
Q 024923 53 KSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETV--------------------------TLLVS 106 (260)
Q Consensus 53 ~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vflGD~vdrG~~s~evl--------------------------~~l~~ 106 (260)
..+|.+++|.||+++.+.++.+.+.....|-++|+||++-....+.|-. .++..
T Consensus 5 ~~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~~ 84 (255)
T PF14582_consen 5 VRKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFRI 84 (255)
T ss_dssp --EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHHH
T ss_pred chhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHHH
Confidence 3579999999999999999998887667788999999986444333322 22222
Q ss_pred cchhCCCcEEEECCCcchhh
Q 024923 107 LKVRYPQRITILRGNHESRQ 126 (260)
Q Consensus 107 lk~~~p~~v~~lrGNHE~~~ 126 (260)
|.. .+--+++|+||||...
T Consensus 85 L~~-~~~p~~~vPG~~Dap~ 103 (255)
T PF14582_consen 85 LGE-LGVPVFVVPGNMDAPE 103 (255)
T ss_dssp HHC-C-SEEEEE--TTS-SH
T ss_pred HHh-cCCcEEEecCCCCchH
Confidence 322 2224999999999953
No 84
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=96.98 E-value=0.0013 Score=54.21 Aligned_cols=51 Identities=22% Similarity=0.231 Sum_probs=32.1
Q ss_pred cCCCCCCceeeeeceecCCCCcH--H---HHHHHHhcch-hC----CCcEEEECCCcchhh
Q 024923 76 GGKCPDTNYLFMGDYVDRGYYSV--E---TVTLLVSLKV-RY----PQRITILRGNHESRQ 126 (260)
Q Consensus 76 ~~~~~~~~~vflGD~vdrG~~s~--e---vl~~l~~lk~-~~----p~~v~~lrGNHE~~~ 126 (260)
+...+.+.+|++||++|.+.... + .+..+.++.. .. +-.++++.||||...
T Consensus 41 i~~~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 41 LQRLKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred HHhcCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 33445688999999999876432 2 3333333211 11 235999999999964
No 85
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=96.92 E-value=0.0021 Score=59.79 Aligned_cols=71 Identities=25% Similarity=0.331 Sum_probs=51.3
Q ss_pred CceeEecCCCCC-------------HHHHHHHHHHcCCCCCCceeeeeceecCCCCcHHHHHHHHh----cch-hCCCcE
Q 024923 54 SPVTICGDIHGQ-------------FHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVS----LKV-RYPQRI 115 (260)
Q Consensus 54 ~~i~viGDIHG~-------------~~~L~~ll~~~~~~~~~~~vflGD~vdrG~~s~evl~~l~~----lk~-~~p~~v 115 (260)
||++.++|.|=- +.+|..+++.+.....+-+|+.||+.|++.-|.+++..+.+ ++. .-| +
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ip--v 78 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIP--V 78 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCc--E
Confidence 578889999944 34455566666555668889999999998888776655443 331 134 9
Q ss_pred EEECCCcchhh
Q 024923 116 TILRGNHESRQ 126 (260)
Q Consensus 116 ~~lrGNHE~~~ 126 (260)
++|.||||...
T Consensus 79 ~~I~GNHD~~~ 89 (390)
T COG0420 79 VVIAGNHDSPS 89 (390)
T ss_pred EEecCCCCchh
Confidence 99999999964
No 86
>PLN02533 probable purple acid phosphatase
Probab=96.79 E-value=0.0014 Score=61.84 Aligned_cols=71 Identities=18% Similarity=0.253 Sum_probs=43.9
Q ss_pred cCceeEecCCCCCHHHHHHHHHHcCCCCCCceeeeeceecCCCCcH---HHHHHHHhcchhCCCcEEEECCCcchhh
Q 024923 53 KSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSV---ETVTLLVSLKVRYPQRITILRGNHESRQ 126 (260)
Q Consensus 53 ~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vflGD~vdrG~~s~---evl~~l~~lk~~~p~~v~~lrGNHE~~~ 126 (260)
.-+++++||++-. ......++.+.....+-+|++||+++-+.... +..+++..+....| ++.+.||||...
T Consensus 139 ~~~f~v~GDlG~~-~~~~~tl~~i~~~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~P--~m~~~GNHE~~~ 212 (427)
T PLN02533 139 PIKFAVSGDLGTS-EWTKSTLEHVSKWDYDVFILPGDLSYANFYQPLWDTFGRLVQPLASQRP--WMVTHGNHELEK 212 (427)
T ss_pred CeEEEEEEeCCCC-cccHHHHHHHHhcCCCEEEEcCccccccchHHHHHHHHHHhhhHhhcCc--eEEeCccccccc
Confidence 4579999999532 22234445444445677889999997543321 12233333444456 899999999853
No 87
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=96.76 E-value=0.0064 Score=52.55 Aligned_cols=72 Identities=19% Similarity=0.265 Sum_probs=46.1
Q ss_pred ccCceeEecCCCCCHHHHH----------------HHHH-HcCCCCCCceeeeeceecCCCC-----cHHHHHHHHhcch
Q 024923 52 VKSPVTICGDIHGQFHDLA----------------ELFR-IGGKCPDTNYLFMGDYVDRGYY-----SVETVTLLVSLKV 109 (260)
Q Consensus 52 ~~~~i~viGDIHG~~~~L~----------------~ll~-~~~~~~~~~~vflGD~vdrG~~-----s~evl~~l~~lk~ 109 (260)
...+..|++|+|=-+.... +.++ .+...+.+.+|++||+-.-.+. ..++-.++..+..
T Consensus 18 ~~~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~ 97 (235)
T COG1407 18 PLGRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLDE 97 (235)
T ss_pred ccCcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHhcc
Confidence 3568999999996555433 2333 2233456889999999754332 3444444444443
Q ss_pred hCCCcEEEECCCcchhh
Q 024923 110 RYPQRITILRGNHESRQ 126 (260)
Q Consensus 110 ~~p~~v~~lrGNHE~~~ 126 (260)
. .++.++||||...
T Consensus 98 ~---evi~i~GNHD~~i 111 (235)
T COG1407 98 R---EVIIIRGNHDNGI 111 (235)
T ss_pred C---cEEEEeccCCCcc
Confidence 2 4999999999964
No 88
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=96.52 E-value=0.0031 Score=55.78 Aligned_cols=66 Identities=20% Similarity=0.253 Sum_probs=42.2
Q ss_pred ceeEecCCCCCH----------------HHHHHHHHHcCCCCCCceee-eeceecCCCCc-----------HHHHHHHHh
Q 024923 55 PVTICGDIHGQF----------------HDLAELFRIGGKCPDTNYLF-MGDYVDRGYYS-----------VETVTLLVS 106 (260)
Q Consensus 55 ~i~viGDIHG~~----------------~~L~~ll~~~~~~~~~~~vf-lGD~vdrG~~s-----------~evl~~l~~ 106 (260)
+|+.++|+||++ ..+..++++......+.+++ .||+++..+.+ ..+++.+..
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~~ln~ 81 (277)
T cd07410 2 RILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIAAMNA 81 (277)
T ss_pred eEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHHHHhhhcccCCCChHHHHHHh
Confidence 578899999996 33566666665433444444 89999865422 235666666
Q ss_pred cchhCCCcEEEECCCcchh
Q 024923 107 LKVRYPQRITILRGNHESR 125 (260)
Q Consensus 107 lk~~~p~~v~~lrGNHE~~ 125 (260)
+.. -++..||||..
T Consensus 82 ~g~-----d~~~lGNHe~d 95 (277)
T cd07410 82 LGY-----DAGTLGNHEFN 95 (277)
T ss_pred cCC-----CEEeecccCcc
Confidence 542 24556999963
No 89
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=96.34 E-value=0.01 Score=52.25 Aligned_cols=46 Identities=20% Similarity=0.317 Sum_probs=28.1
Q ss_pred CCCceeeeeceecCCCCcH-----HHHHHHHhc-chhC-CCcEEEECCCcchh
Q 024923 80 PDTNYLFMGDYVDRGYYSV-----ETVTLLVSL-KVRY-PQRITILRGNHESR 125 (260)
Q Consensus 80 ~~~~~vflGD~vdrG~~s~-----evl~~l~~l-k~~~-p~~v~~lrGNHE~~ 125 (260)
..+.+||+||++|.|.... +-+..+.+. .... ..-++.|.||||.-
T Consensus 45 ~PD~vv~lGDL~d~G~~~~~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDig 97 (257)
T cd08163 45 KPDSTIFLGDLFDGGRDWADEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDIG 97 (257)
T ss_pred CCCEEEEecccccCCeeCcHHHHHHHHHHHHHHhcCCCccceEEEeCCCcccC
Confidence 5678899999999987532 112222221 1110 01389999999973
No 90
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=96.07 E-value=0.013 Score=51.58 Aligned_cols=69 Identities=25% Similarity=0.293 Sum_probs=40.0
Q ss_pred ceeEecCCCCC--H--HHHHHHHH-HcCCCCCCceeeeecee-cCCCCcH------HHHHHHHh-cchhCCCcEEEECCC
Q 024923 55 PVTICGDIHGQ--F--HDLAELFR-IGGKCPDTNYLFMGDYV-DRGYYSV------ETVTLLVS-LKVRYPQRITILRGN 121 (260)
Q Consensus 55 ~i~viGDIHG~--~--~~L~~ll~-~~~~~~~~~~vflGD~v-drG~~s~------evl~~l~~-lk~~~p~~v~~lrGN 121 (260)
+++++||.=.. . .++.+.+. .+...+.+-+|++||++ +-|..+. +.+..++. +....| ++.+.||
T Consensus 2 ~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~~~~P--~~~v~GN 79 (277)
T cd07378 2 RFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPSLQVP--WYLVLGN 79 (277)
T ss_pred eEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccchhhcCC--eEEecCC
Confidence 67899998764 1 23333333 33334557788999997 4453211 22222222 222334 9999999
Q ss_pred cchh
Q 024923 122 HESR 125 (260)
Q Consensus 122 HE~~ 125 (260)
||..
T Consensus 80 HD~~ 83 (277)
T cd07378 80 HDYS 83 (277)
T ss_pred cccC
Confidence 9985
No 91
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=96.05 E-value=0.013 Score=49.24 Aligned_cols=65 Identities=15% Similarity=0.210 Sum_probs=40.8
Q ss_pred CCCCCHHHHHHHHHHcC-CCCCCceeeeeceecCCCCcHH-HHHHHHhcchhC---------------------CCcEEE
Q 024923 61 DIHGQFHDLAELFRIGG-KCPDTNYLFMGDYVDRGYYSVE-TVTLLVSLKVRY---------------------PQRITI 117 (260)
Q Consensus 61 DIHG~~~~L~~ll~~~~-~~~~~~~vflGD~vdrG~~s~e-vl~~l~~lk~~~---------------------p~~v~~ 117 (260)
|++|+=.=|.+.++.+- .-.++.++||||++|.|--+-+ --....+.+..+ .-.++.
T Consensus 24 d~~~~D~YL~~~~~~~~~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~ 103 (193)
T cd08164 24 DLFGNDYFLGHIVSMMQFWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLIN 103 (193)
T ss_pred hhhhhHHHHHHHHHHHHHhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEE
Confidence 55666666777776543 3356778899999998753322 223333333222 135789
Q ss_pred ECCCcchh
Q 024923 118 LRGNHESR 125 (260)
Q Consensus 118 lrGNHE~~ 125 (260)
|.||||.-
T Consensus 104 V~GNHDIG 111 (193)
T cd08164 104 IAGNHDVG 111 (193)
T ss_pred ECCcccCC
Confidence 99999994
No 92
>PF08321 PPP5: PPP5 TPR repeat region; InterPro: IPR013235 This domain is specific to the PPP5 subfamily of serine/threonine phosphatases.; GO: 0004722 protein serine/threonine phosphatase activity, 0046872 metal ion binding; PDB: 3ICF_B 3H60_B 3H63_A 3H66_A 3H62_B 1A17_A 1S95_B 3H69_A 3H68_D 3H64_D ....
Probab=95.89 E-value=0.01 Score=44.19 Aligned_cols=41 Identities=17% Similarity=0.151 Sum_probs=33.4
Q ss_pred ccHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhcCCCcccc
Q 024923 12 GNLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPV 52 (260)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~~~~ 52 (260)
+.+++|++.|++++.|+...+..|+.++.++|+++|+++++
T Consensus 55 efv~~mie~FK~~K~Lhkkyv~~Il~~~~~llk~~PslVeI 95 (95)
T PF08321_consen 55 EFVKAMIEWFKNQKKLHKKYVYQILLEAKKLLKQLPSLVEI 95 (95)
T ss_dssp HHHHHHHHHHHCT----HHHHHHHHHHHHHHHHTS-SEEEE
T ss_pred HHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHhCcCccCC
Confidence 46899999999999999999999999999999999999864
No 93
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=95.85 E-value=0.013 Score=51.33 Aligned_cols=66 Identities=21% Similarity=0.241 Sum_probs=42.7
Q ss_pred ceeEecCCCCCH----------HHHHHHHHHcCCCCCCceeeeeceecCCCCc-----HHHHHHHHhcchhCCCcEEEEC
Q 024923 55 PVTICGDIHGQF----------HDLAELFRIGGKCPDTNYLFMGDYVDRGYYS-----VETVTLLVSLKVRYPQRITILR 119 (260)
Q Consensus 55 ~i~viGDIHG~~----------~~L~~ll~~~~~~~~~~~vflGD~vdrG~~s-----~evl~~l~~lk~~~p~~v~~lr 119 (260)
+++-++|+||++ ..+..++++....+...++..||+++..+.+ ..+++.+..+.. .+ +..
T Consensus 2 ~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~g~----d~-~~~ 76 (257)
T cd07408 2 TILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPISDLDKGETIIKIMNAVGY----DA-VTP 76 (257)
T ss_pred EEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchhhhhcCCcHHHHHHHhcCC----cE-Ecc
Confidence 578899999984 4456666665433445566799999865532 244555555542 24 456
Q ss_pred CCcchh
Q 024923 120 GNHESR 125 (260)
Q Consensus 120 GNHE~~ 125 (260)
||||.-
T Consensus 77 GNHefd 82 (257)
T cd07408 77 GNHEFD 82 (257)
T ss_pred cccccc
Confidence 999963
No 94
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=95.28 E-value=0.037 Score=50.47 Aligned_cols=72 Identities=21% Similarity=0.364 Sum_probs=46.6
Q ss_pred CceeEecCCCCCHHHHHH---HHHHcCCCCCCceeeeeceec-CCC---CcHHHHHHHHhc---------chhCCCcEEE
Q 024923 54 SPVTICGDIHGQFHDLAE---LFRIGGKCPDTNYLFMGDYVD-RGY---YSVETVTLLVSL---------KVRYPQRITI 117 (260)
Q Consensus 54 ~~i~viGDIHG~~~~L~~---ll~~~~~~~~~~~vflGD~vd-rG~---~s~evl~~l~~l---------k~~~p~~v~~ 117 (260)
|||.|=|=-||.++.+-+ +.++.|-.+.+.++++||+=. |.. .++.|=..-.++ ....|--.++
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIF 80 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIF 80 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEE
Confidence 589999999999999974 445566667888999999831 211 122221111111 1235545789
Q ss_pred ECCCcchh
Q 024923 118 LRGNHESR 125 (260)
Q Consensus 118 lrGNHE~~ 125 (260)
+-||||.+
T Consensus 81 IGGNHEAs 88 (456)
T KOG2863|consen 81 IGGNHEAS 88 (456)
T ss_pred ecCchHHH
Confidence 99999995
No 95
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=95.27 E-value=0.0065 Score=57.12 Aligned_cols=115 Identities=15% Similarity=0.053 Sum_probs=93.3
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCCcccc----cCceeEecCCCCCHHHHHHHHHHcCCCCCCceeeeeceecCCCCcHHHH
Q 024923 26 PLSEQEVRVLCEKAKEILMDESNVQPV----KSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETV 101 (260)
Q Consensus 26 ~~~~~~~~~l~~~~~~~~~~e~~~~~~----~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vflGD~vdrG~~s~evl 101 (260)
.+...++..+++.+.+++..+|+.... ..-.+.++|.||.+.++.++++.- .....-|++-|++++++....+.+
T Consensus 14 ~l~~~~fd~avdlysKaI~ldpnca~~~anRa~a~lK~e~~~~Al~Da~kaie~d-P~~~K~Y~rrg~a~m~l~~~~~A~ 92 (476)
T KOG0376|consen 14 ALKDKVFDVAVDLYSKAIELDPNCAIYFANRALAHLKVESFGGALHDALKAIELD-PTYIKAYVRRGTAVMALGEFKKAL 92 (476)
T ss_pred hcccchHHHHHHHHHHHHhcCCcceeeechhhhhheeechhhhHHHHHHhhhhcC-chhhheeeeccHHHHhHHHHHHHH
Confidence 467788899999999999999987543 234899999999999999888754 112244889999999999999999
Q ss_pred HHHHhcchhCCCcEEEECCCcchhhhhhhhcchHHHHHHh
Q 024923 102 TLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKY 141 (260)
Q Consensus 102 ~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~ 141 (260)
..+...+...|+...+.|++||...+-..++|..++...+
T Consensus 93 ~~l~~~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe~ai~~~~ 132 (476)
T KOG0376|consen 93 LDLEKVKKLAPNDPDATRKIDECNKIVSEEKFEKAILTPE 132 (476)
T ss_pred HHHHHhhhcCcCcHHHHHHHHHHHHHHHHHhhhhcccCCc
Confidence 9999999999999999999999987776666665544433
No 96
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=95.25 E-value=0.031 Score=49.95 Aligned_cols=66 Identities=23% Similarity=0.332 Sum_probs=43.2
Q ss_pred ceeEecCCCCCHH--------------HHHHHHHHcCCCC-CCceeeeeceecCCCC-c-----HHHHHHHHhcchhCCC
Q 024923 55 PVTICGDIHGQFH--------------DLAELFRIGGKCP-DTNYLFMGDYVDRGYY-S-----VETVTLLVSLKVRYPQ 113 (260)
Q Consensus 55 ~i~viGDIHG~~~--------------~L~~ll~~~~~~~-~~~~vflGD~vdrG~~-s-----~evl~~l~~lk~~~p~ 113 (260)
+|+.++|+||++. .+..++++..... ...++..||++...+. + ..+++.+.++...
T Consensus 2 ~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g~D--- 78 (288)
T cd07412 2 QILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAMGVD--- 78 (288)
T ss_pred eEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhhCCe---
Confidence 5788999999854 3566666654333 3445569999976554 2 2456666666532
Q ss_pred cEEEECCCcchh
Q 024923 114 RITILRGNHESR 125 (260)
Q Consensus 114 ~v~~lrGNHE~~ 125 (260)
.+..||||.-
T Consensus 79 --a~t~GNHefd 88 (288)
T cd07412 79 --ASAVGNHEFD 88 (288)
T ss_pred --eeeecccccc
Confidence 4556999963
No 97
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=95.11 E-value=0.038 Score=45.81 Aligned_cols=43 Identities=28% Similarity=0.367 Sum_probs=30.8
Q ss_pred CCCceeeeecee--cCCCCcHHHHHHHHhcchhCCCcEEEECCCcchhh
Q 024923 80 PDTNYLFMGDYV--DRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQ 126 (260)
Q Consensus 80 ~~~~~vflGD~v--drG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~ 126 (260)
+++.++.-||+- -|=++..+-+.+|-.| |+.-+++|||||+..
T Consensus 43 ~eDiVllpGDiSWaM~l~ea~~Dl~~i~~L----PG~K~m~rGNHDYWw 87 (230)
T COG1768 43 PEDIVLLPGDISWAMRLEEAEEDLRFIGDL----PGTKYMIRGNHDYWW 87 (230)
T ss_pred hhhEEEecccchhheechhhhhhhhhhhcC----CCcEEEEecCCcccc
Confidence 455566789985 3455666667776655 577899999999964
No 98
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=94.82 E-value=0.039 Score=48.55 Aligned_cols=65 Identities=22% Similarity=0.174 Sum_probs=39.2
Q ss_pred ceeEecCCCCCH----------------------HHHHHHHHHcCCC-CCCce-eeeeceecCCCCc-----HHHHHHHH
Q 024923 55 PVTICGDIHGQF----------------------HDLAELFRIGGKC-PDTNY-LFMGDYVDRGYYS-----VETVTLLV 105 (260)
Q Consensus 55 ~i~viGDIHG~~----------------------~~L~~ll~~~~~~-~~~~~-vflGD~vdrG~~s-----~evl~~l~ 105 (260)
.++.++|+||++ ..+..++++.... ..+.+ +..||+++..+.+ ..+++.+.
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l~ 81 (264)
T cd07411 2 TLLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGEALYTRGQAMVDALN 81 (264)
T ss_pred EEEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChHHhhcCChhHHHHHH
Confidence 467788888874 3345566665433 33444 4599999876543 24555555
Q ss_pred hcchhCCCcEEEECCCcchh
Q 024923 106 SLKVRYPQRITILRGNHESR 125 (260)
Q Consensus 106 ~lk~~~p~~v~~lrGNHE~~ 125 (260)
++. - -.+. ||||..
T Consensus 82 ~~g----~-da~~-GNHefd 95 (264)
T cd07411 82 ALG----V-DAMV-GHWEFT 95 (264)
T ss_pred hhC----C-eEEe-cccccc
Confidence 543 1 2344 999964
No 99
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=94.71 E-value=0.068 Score=47.52 Aligned_cols=66 Identities=20% Similarity=0.228 Sum_probs=40.4
Q ss_pred ceeEecCCCCCH---------------------HHHHHHHHHcCCCCCCc-eeeeeceecCCCC-----cHHHHHHHHhc
Q 024923 55 PVTICGDIHGQF---------------------HDLAELFRIGGKCPDTN-YLFMGDYVDRGYY-----SVETVTLLVSL 107 (260)
Q Consensus 55 ~i~viGDIHG~~---------------------~~L~~ll~~~~~~~~~~-~vflGD~vdrG~~-----s~evl~~l~~l 107 (260)
+++.++|+||++ ..+..++++......+. ++-.||++...+. ...+++.+..+
T Consensus 2 ~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~~ 81 (281)
T cd07409 2 TILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFMNLL 81 (281)
T ss_pred EEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHHHhc
Confidence 577889999874 44555666554333333 4448999987653 33455555555
Q ss_pred chhCCCcEEEECCCcchh
Q 024923 108 KVRYPQRITILRGNHESR 125 (260)
Q Consensus 108 k~~~p~~v~~lrGNHE~~ 125 (260)
.. .+ +..||||.-
T Consensus 82 g~----D~-~~lGNHefd 94 (281)
T cd07409 82 GY----DA-MTLGNHEFD 94 (281)
T ss_pred CC----CE-EEecccccc
Confidence 42 24 445999974
No 100
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=94.15 E-value=0.071 Score=47.45 Aligned_cols=71 Identities=23% Similarity=0.269 Sum_probs=40.8
Q ss_pred eeEecCCCCC---HHHHHHHHHHcCCC--CCCceeeeeceecCCCCcH--H-----HHH-HHHhcchhCCC-cEEEECCC
Q 024923 56 VTICGDIHGQ---FHDLAELFRIGGKC--PDTNYLFMGDYVDRGYYSV--E-----TVT-LLVSLKVRYPQ-RITILRGN 121 (260)
Q Consensus 56 i~viGDIHG~---~~~L~~ll~~~~~~--~~~~~vflGD~vdrG~~s~--e-----vl~-~l~~lk~~~p~-~v~~lrGN 121 (260)
..-.|+-. | ...+...++.+... +.+-+|+.||+++.+.... + ... ....++..+|. .++.+.||
T Consensus 40 ~~~~G~~~-CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GN 118 (296)
T cd00842 40 AGPWGDYG-CDSPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGN 118 (296)
T ss_pred CCCCcCcC-CCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCC
Confidence 44456554 4 34455666655433 5677889999998765421 1 112 22223322221 49999999
Q ss_pred cchhhh
Q 024923 122 HESRQI 127 (260)
Q Consensus 122 HE~~~~ 127 (260)
||..-.
T Consensus 119 HD~~p~ 124 (296)
T cd00842 119 HDSYPV 124 (296)
T ss_pred CCCCcc
Confidence 998643
No 101
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=93.93 E-value=0.07 Score=56.58 Aligned_cols=67 Identities=18% Similarity=0.231 Sum_probs=44.5
Q ss_pred CceeEecCCCCCH---HHHHHHHHHcCCCCCCceee-eeceecCCCCc-----HHHHHHHHhcchhCCCcEEEECCCcch
Q 024923 54 SPVTICGDIHGQF---HDLAELFRIGGKCPDTNYLF-MGDYVDRGYYS-----VETVTLLVSLKVRYPQRITILRGNHES 124 (260)
Q Consensus 54 ~~i~viGDIHG~~---~~L~~ll~~~~~~~~~~~vf-lGD~vdrG~~s-----~evl~~l~~lk~~~p~~v~~lrGNHE~ 124 (260)
.+|+.++|+||.+ ..+..+++++.....+.+++ .||+++..+.+ ..+++.+..+.. -++..||||.
T Consensus 661 l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~lg~-----d~~~~GNHEf 735 (1163)
T PRK09419 661 LTILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEMGY-----DASTFGNHEF 735 (1163)
T ss_pred EEEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhCcCC-----CEEEeccccc
Confidence 4799999999885 44555566554333444444 89999876644 346666666642 3568999997
Q ss_pred h
Q 024923 125 R 125 (260)
Q Consensus 125 ~ 125 (260)
-
T Consensus 736 d 736 (1163)
T PRK09419 736 D 736 (1163)
T ss_pred c
Confidence 3
No 102
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=93.84 E-value=0.13 Score=46.72 Aligned_cols=70 Identities=19% Similarity=0.233 Sum_probs=41.0
Q ss_pred ceeEecCCCCCHH-----------------HHHH--HH-HHcCCCCCCceeeeeceecCCCCcHHH---HHHHHhcchhC
Q 024923 55 PVTICGDIHGQFH-----------------DLAE--LF-RIGGKCPDTNYLFMGDYVDRGYYSVET---VTLLVSLKVRY 111 (260)
Q Consensus 55 ~i~viGDIHG~~~-----------------~L~~--ll-~~~~~~~~~~~vflGD~vdrG~~s~ev---l~~l~~lk~~~ 111 (260)
+|+.+.|+|=... ++.. .+ +.+.....+.+||+||.|+. ...... +....+-.+.+
T Consensus 55 KIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g-~~t~Da~~sl~kAvaP~I~~ 133 (379)
T KOG1432|consen 55 KILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFG-HSTQDAATSLMKAVAPAIDR 133 (379)
T ss_pred EEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCcccc-cccHhHHHHHHHHhhhHhhc
Confidence 7899999996555 2211 12 22333456889999999985 433333 33333222222
Q ss_pred CCcEEEECCCcchh
Q 024923 112 PQRITILRGNHESR 125 (260)
Q Consensus 112 p~~v~~lrGNHE~~ 125 (260)
.=-..++.||||+.
T Consensus 134 ~IPwA~~lGNHDde 147 (379)
T KOG1432|consen 134 KIPWAAVLGNHDDE 147 (379)
T ss_pred CCCeEEEecccccc
Confidence 11267899999995
No 103
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=93.75 E-value=0.12 Score=45.81 Aligned_cols=67 Identities=15% Similarity=0.106 Sum_probs=49.9
Q ss_pred CceeEecCCCCC--HHHHHHHHHHcCCCC-CCceeeeeceecCC-CCcHHHHHHHHhcchhCCCcEEEECCCcchh
Q 024923 54 SPVTICGDIHGQ--FHDLAELFRIGGKCP-DTNYLFMGDYVDRG-YYSVETVTLLVSLKVRYPQRITILRGNHESR 125 (260)
Q Consensus 54 ~~i~viGDIHG~--~~~L~~ll~~~~~~~-~~~~vflGD~vdrG-~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 125 (260)
|+|.++|||=|. ...+...|..+.... .+-+|..||....| .-+.++.+.|.++... ++.+ |||+.-
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~~~~~~~L~~~GvD----viT~-GNH~~D 71 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGKGLTLKIYEFLKQSGVN----YITM-GNHTWF 71 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCCHHHHHHHHhcCCC----EEEc-cchhcc
Confidence 589999999999 566777777665433 34555689998665 4678899999888754 6666 999984
No 104
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=93.61 E-value=0.13 Score=45.17 Aligned_cols=65 Identities=26% Similarity=0.233 Sum_probs=42.5
Q ss_pred ceeEecCCC----------CCHHHHHHHHHHcCCCCCC-ceeeeeceecCCCC-----cHHHHHHHHhcchhCCCcEEEE
Q 024923 55 PVTICGDIH----------GQFHDLAELFRIGGKCPDT-NYLFMGDYVDRGYY-----SVETVTLLVSLKVRYPQRITIL 118 (260)
Q Consensus 55 ~i~viGDIH----------G~~~~L~~ll~~~~~~~~~-~~vflGD~vdrG~~-----s~evl~~l~~lk~~~p~~v~~l 118 (260)
+++-+.|+| |-+..+..++++....+.+ .++..||+++..+. ...+++.+..+.. -+..
T Consensus 2 ~il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~~-----d~~~ 76 (257)
T cd07406 2 TILHFNDVYEIAPLDGGPVGGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNALGV-----DLAC 76 (257)
T ss_pred eEEEEccceeecccCCCCcCCHHHHHHHHHHHHhcCCCEEEEECCCccCCccchhhcCCccHHHHHHhcCC-----cEEe
Confidence 345566666 4467777777776543344 45569999987653 2456676666642 3567
Q ss_pred CCCcch
Q 024923 119 RGNHES 124 (260)
Q Consensus 119 rGNHE~ 124 (260)
.||||.
T Consensus 77 ~GNHef 82 (257)
T cd07406 77 FGNHEF 82 (257)
T ss_pred eccccc
Confidence 899996
No 105
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=93.30 E-value=0.076 Score=51.75 Aligned_cols=60 Identities=18% Similarity=0.241 Sum_probs=42.8
Q ss_pred CCHHHHHHHHHH-cCCCCCCceeeeeceecCCCCcHHHHHHHHhcchhCCCcEEEECCCcchhhhh
Q 024923 64 GQFHDLAELFRI-GGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQIT 128 (260)
Q Consensus 64 G~~~~L~~ll~~-~~~~~~~~~vflGD~vdrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~ 128 (260)
|..++|...|.. +..--.+.+-.+||+.||||.+-.+++.|+..- ++=+-.||||--++.
T Consensus 167 ~~a~~fI~al~~lIqrL~VDhLHIvGDIyDRGp~pd~ImD~Lm~~h-----svDIQWGNHDIlWMG 227 (640)
T PF06874_consen 167 GRADEFIIALSELIQRLAVDHLHIVGDIYDRGPRPDKIMDRLMNYH-----SVDIQWGNHDILWMG 227 (640)
T ss_pred CcHHHHHHHHHHHHHHHhhhheeecccccCCCCChhHHHHHHhcCC-----CccccccchHHHHHH
Confidence 345555443332 111234667789999999999999999999763 577889999997653
No 106
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=92.85 E-value=0.14 Score=47.84 Aligned_cols=45 Identities=22% Similarity=0.427 Sum_probs=31.4
Q ss_pred CCCceeeeeceecCCCCc--HHHHHHHHhcchhCCC----cEEEECCCcch
Q 024923 80 PDTNYLFMGDYVDRGYYS--VETVTLLVSLKVRYPQ----RITILRGNHES 124 (260)
Q Consensus 80 ~~~~~vflGD~vdrG~~s--~evl~~l~~lk~~~p~----~v~~lrGNHE~ 124 (260)
.++-++||||++|-|... -|--+...+++..+|. .++.+.||||-
T Consensus 93 kPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf~~k~~~~~~~i~GNhDI 143 (410)
T KOG3662|consen 93 KPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIFGRKGNIKVIYIAGNHDI 143 (410)
T ss_pred CCCEEEEeccccccCccCChHHHHHHHHHHHHhhCCCCCCeeEEeCCcccc
Confidence 456678899999988753 3344445555544443 68899999998
No 107
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=92.30 E-value=0.15 Score=45.40 Aligned_cols=66 Identities=18% Similarity=0.042 Sum_probs=38.4
Q ss_pred ceeEecCCCCCHHH----------HHHHHHHcCC-----CCCCceeeeeceecCCCC-----cHHHHHHHHhcchhCCCc
Q 024923 55 PVTICGDIHGQFHD----------LAELFRIGGK-----CPDTNYLFMGDYVDRGYY-----SVETVTLLVSLKVRYPQR 114 (260)
Q Consensus 55 ~i~viGDIHG~~~~----------L~~ll~~~~~-----~~~~~~vflGD~vdrG~~-----s~evl~~l~~lk~~~p~~ 114 (260)
+|+..+|+||++.. +..++++... .+...++-.||.+...+. ..-+++.+.++...
T Consensus 2 tIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~~~~~~g~~~~~~~n~~g~D---- 77 (285)
T cd07405 2 TILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGYD---- 77 (285)
T ss_pred EEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchhHHhcCcchHHHHHHhhCCc----
Confidence 57889999998533 4445554422 223334458999843332 23345666666532
Q ss_pred EEEECCCcchh
Q 024923 115 ITILRGNHESR 125 (260)
Q Consensus 115 v~~lrGNHE~~ 125 (260)
+. ..||||.-
T Consensus 78 a~-~~GNHEfD 87 (285)
T cd07405 78 AM-AVGNHEFD 87 (285)
T ss_pred EE-eecccccc
Confidence 44 44999974
No 108
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=91.97 E-value=1.4 Score=41.89 Aligned_cols=74 Identities=24% Similarity=0.358 Sum_probs=41.2
Q ss_pred ceeEecCCCC-----CHHHHHHHHHHcCCC----CCCcee-eeeceecC-CC-----------CcHHHHHHHHhcchhCC
Q 024923 55 PVTICGDIHG-----QFHDLAELFRIGGKC----PDTNYL-FMGDYVDR-GY-----------YSVETVTLLVSLKVRYP 112 (260)
Q Consensus 55 ~i~viGDIHG-----~~~~L~~ll~~~~~~----~~~~~v-flGD~vdr-G~-----------~s~evl~~l~~lk~~~p 112 (260)
.+++++|+|= .-+++.+.++-++.+ +..+|+ ..||.||. |- +..+-.+.+.++-..-|
T Consensus 227 ~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L~~vp 306 (481)
T COG1311 227 YVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFLDQVP 306 (481)
T ss_pred EEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHHHhhCC
Confidence 5899999996 223334444443322 123454 68999994 21 11222333333333333
Q ss_pred C--cEEEECCCcchhhhh
Q 024923 113 Q--RITILRGNHESRQIT 128 (260)
Q Consensus 113 ~--~v~~lrGNHE~~~~~ 128 (260)
. .+++.+||||..-..
T Consensus 307 ~~I~v~i~PGnhDa~r~a 324 (481)
T COG1311 307 EHIKVFIMPGNHDAVRQA 324 (481)
T ss_pred CCceEEEecCCCCccccc
Confidence 3 588999999996543
No 109
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=90.94 E-value=0.37 Score=43.67 Aligned_cols=65 Identities=23% Similarity=0.222 Sum_probs=41.6
Q ss_pred ceeEecCCCCCHH------HHHHHHHHcCC-----CCCCceeeeeceecCCCC-------------cHHHHHHHHhcchh
Q 024923 55 PVTICGDIHGQFH------DLAELFRIGGK-----CPDTNYLFMGDYVDRGYY-------------SVETVTLLVSLKVR 110 (260)
Q Consensus 55 ~i~viGDIHG~~~------~L~~ll~~~~~-----~~~~~~vflGD~vdrG~~-------------s~evl~~l~~lk~~ 110 (260)
.|+-..|+||++. .+..++++... .+...++..||.+.-++. ...+++++.++..
T Consensus 2 ~IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~g~- 80 (313)
T cd08162 2 QLLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNALGV- 80 (313)
T ss_pred eEEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhccCC-
Confidence 4678899999953 44444554422 233445569999875443 3456677777763
Q ss_pred CCCcEEEECCCcch
Q 024923 111 YPQRITILRGNHES 124 (260)
Q Consensus 111 ~p~~v~~lrGNHE~ 124 (260)
=.+..||||.
T Consensus 81 ----Da~tlGNHEF 90 (313)
T cd08162 81 ----QAIALGNHEF 90 (313)
T ss_pred ----cEEecccccc
Confidence 3677999996
No 110
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=90.13 E-value=0.36 Score=43.10 Aligned_cols=67 Identities=21% Similarity=0.136 Sum_probs=39.9
Q ss_pred CceeEecCCCCCHH-------------HHHHHHHHc----CCC-CCCceeeeeceecCCCCc-------HHHHHHHHhcc
Q 024923 54 SPVTICGDIHGQFH-------------DLAELFRIG----GKC-PDTNYLFMGDYVDRGYYS-------VETVTLLVSLK 108 (260)
Q Consensus 54 ~~i~viGDIHG~~~-------------~L~~ll~~~----~~~-~~~~~vflGD~vdrG~~s-------~evl~~l~~lk 108 (260)
-+|+-..|+||++. .+.++.+.+ ... +...++..||.+..-+.+ .-+++++.++.
T Consensus 6 ltILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~mg 85 (282)
T cd07407 6 INFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFRMMP 85 (282)
T ss_pred EEEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHHhcC
Confidence 36889999999763 223333222 212 223344599998754432 33466666665
Q ss_pred hhCCCcEEEECCCcchh
Q 024923 109 VRYPQRITILRGNHESR 125 (260)
Q Consensus 109 ~~~p~~v~~lrGNHE~~ 125 (260)
- =.+..||||.-
T Consensus 86 y-----Da~tlGNHEFd 97 (282)
T cd07407 86 Y-----DLLTIGNHELY 97 (282)
T ss_pred C-----cEEeecccccC
Confidence 2 46888999994
No 111
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=90.05 E-value=5.8 Score=34.93 Aligned_cols=45 Identities=16% Similarity=0.349 Sum_probs=26.8
Q ss_pred CceeeeeceecCCCCc------------------HHHHH----HHHhcchhCCCcEEEECCCcchhhhh
Q 024923 82 TNYLFMGDYVDRGYYS------------------VETVT----LLVSLKVRYPQRITILRGNHESRQIT 128 (260)
Q Consensus 82 ~~~vflGD~vdrG~~s------------------~evl~----~l~~lk~~~p~~v~~lrGNHE~~~~~ 128 (260)
.++|+.||.|+.-... .+-+. +|.++...- .|.+.+||||-....
T Consensus 44 ~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~l~~l~~~i--~V~imPG~~Dp~~~~ 110 (257)
T cd07387 44 VRLIIAGNSLSKSTQGKDSQTKARYLTKKSSAASVEAVKELDNFLSQLASSV--PVDLMPGEFDPANHS 110 (257)
T ss_pred EEEEEECCcccccccccchhhhhhccccccchhhHHHHHHHHHHHHhhhcCC--eEEECCCCCCccccc
Confidence 3588999999853221 22222 233333333 388999999986543
No 112
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=89.94 E-value=0.38 Score=46.53 Aligned_cols=68 Identities=28% Similarity=0.288 Sum_probs=45.0
Q ss_pred cCceeEecCCCCCHH------------HH---HHHHHHcCCCCCCc-eeeeeceecCCC------CcHHHHHHHHhcchh
Q 024923 53 KSPVTICGDIHGQFH------------DL---AELFRIGGKCPDTN-YLFMGDYVDRGY------YSVETVTLLVSLKVR 110 (260)
Q Consensus 53 ~~~i~viGDIHG~~~------------~L---~~ll~~~~~~~~~~-~vflGD~vdrG~------~s~evl~~l~~lk~~ 110 (260)
+.+|+-..|+||++. .+ ..++++........ +|=.||+++..+ .....++.+..++-
T Consensus 26 ~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m~y- 104 (517)
T COG0737 26 KLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNALGY- 104 (517)
T ss_pred eEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhhcCC-
Confidence 458999999999999 33 33444443322333 444999998733 34456777777763
Q ss_pred CCCcEEEECCCcchh
Q 024923 111 YPQRITILRGNHESR 125 (260)
Q Consensus 111 ~p~~v~~lrGNHE~~ 125 (260)
=....||||.-
T Consensus 105 ----Da~tiGNHEFd 115 (517)
T COG0737 105 ----DAMTLGNHEFD 115 (517)
T ss_pred ----cEEeecccccc
Confidence 36778999985
No 113
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=89.76 E-value=0.41 Score=40.27 Aligned_cols=72 Identities=11% Similarity=0.177 Sum_probs=39.0
Q ss_pred eeEecCCCCC-----HHHHHHHHHHcC-CCCCCceeeeeceecCCCCcH----------HHHHHHHhcch---h--CCCc
Q 024923 56 VTICGDIHGQ-----FHDLAELFRIGG-KCPDTNYLFMGDYVDRGYYSV----------ETVTLLVSLKV---R--YPQR 114 (260)
Q Consensus 56 i~viGDIHG~-----~~~L~~ll~~~~-~~~~~~~vflGD~vdrG~~s~----------evl~~l~~lk~---~--~p~~ 114 (260)
|++++|+|=. ++.|.++|+.+. ....+.+|++|+++|.-.... .....+..+.. . .--+
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 4677777755 566777787776 566678999999998521111 11111111111 1 1137
Q ss_pred EEEECCCcchhhh
Q 024923 115 ITILRGNHESRQI 127 (260)
Q Consensus 115 v~~lrGNHE~~~~ 127 (260)
++++.|++|-...
T Consensus 81 vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 81 VVLVPGPNDPTSS 93 (209)
T ss_dssp EEEE--TTCTT-S
T ss_pred EEEeCCCcccccc
Confidence 9999999998644
No 114
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=89.06 E-value=0.88 Score=40.02 Aligned_cols=66 Identities=21% Similarity=0.164 Sum_probs=46.1
Q ss_pred ceeEecCCCCCHHHH--HHHHHHcCCC-CCCceeeeeceecCC-CCcHHHHHHHHhcchhCCCcEEEECCCcchh
Q 024923 55 PVTICGDIHGQFHDL--AELFRIGGKC-PDTNYLFMGDYVDRG-YYSVETVTLLVSLKVRYPQRITILRGNHESR 125 (260)
Q Consensus 55 ~i~viGDIHG~~~~L--~~ll~~~~~~-~~~~~vflGD~vdrG-~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 125 (260)
++.+||||=|....- ...|..+... +.+-+|..||..-.| .-+.++.+.|..+... ++.+ ||||.-
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~~~~~~~L~~~G~D----~iTl-GNH~fD 70 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGITPKIAKELLSAGVD----VITM-GNHTWD 70 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCCCHHHHHHHHhcCCC----EEEe-cccccC
Confidence 578999999987654 4556555332 234455689998666 4678888888888754 5555 999864
No 115
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=88.48 E-value=0.58 Score=46.64 Aligned_cols=68 Identities=19% Similarity=0.172 Sum_probs=44.3
Q ss_pred ccCceeEecCCCCCHHH----------------HHHHHHHcCCC-CCCceeeeeceecCCCCcH-------------HHH
Q 024923 52 VKSPVTICGDIHGQFHD----------------LAELFRIGGKC-PDTNYLFMGDYVDRGYYSV-------------ETV 101 (260)
Q Consensus 52 ~~~~i~viGDIHG~~~~----------------L~~ll~~~~~~-~~~~~vflGD~vdrG~~s~-------------evl 101 (260)
...+|+-..|+||++.. +..++++.... ++..+|-.||.+...|.+- -++
T Consensus 24 ~~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~~~~~~~~~~~~g~~~p~i 103 (649)
T PRK09420 24 VDLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPLGDYMAAKGLKAGDVHPVY 103 (649)
T ss_pred ceEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchhhhhhhhccccCCCcchHH
Confidence 45689999999999743 34455554322 3344556999997655421 256
Q ss_pred HHHHhcchhCCCcEEEECCCcch
Q 024923 102 TLLVSLKVRYPQRITILRGNHES 124 (260)
Q Consensus 102 ~~l~~lk~~~p~~v~~lrGNHE~ 124 (260)
+.+..+.- =....||||.
T Consensus 104 ~amN~lgy-----Da~tlGNHEF 121 (649)
T PRK09420 104 KAMNTLDY-----DVGNLGNHEF 121 (649)
T ss_pred HHHHhcCC-----cEEeccchhh
Confidence 66666652 4678899996
No 116
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=88.19 E-value=0.6 Score=46.36 Aligned_cols=66 Identities=20% Similarity=0.147 Sum_probs=41.7
Q ss_pred CceeEecCCCCCHHH----------------HHHHHHHcCCC-CCCceeeeeceecCCCCc-------------HHHHHH
Q 024923 54 SPVTICGDIHGQFHD----------------LAELFRIGGKC-PDTNYLFMGDYVDRGYYS-------------VETVTL 103 (260)
Q Consensus 54 ~~i~viGDIHG~~~~----------------L~~ll~~~~~~-~~~~~vflGD~vdrG~~s-------------~evl~~ 103 (260)
-+|+-..|+||++.. +..++++.... ++..+|-.||.+...|.+ .-+++.
T Consensus 3 l~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~p~~~~ 82 (626)
T TIGR01390 3 LRIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMHPVYKA 82 (626)
T ss_pred EEEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccchhhhhhccccCCCcChHHHH
Confidence 478899999999743 34455554322 233455599999755433 235566
Q ss_pred HHhcchhCCCcEEEECCCcch
Q 024923 104 LVSLKVRYPQRITILRGNHES 124 (260)
Q Consensus 104 l~~lk~~~p~~v~~lrGNHE~ 124 (260)
+..+.- =....||||.
T Consensus 83 mN~lgy-----Da~tlGNHEF 98 (626)
T TIGR01390 83 MNLLKY-----DVGNLGNHEF 98 (626)
T ss_pred HhhcCc-----cEEecccccc
Confidence 666652 3578899996
No 117
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=87.46 E-value=0.66 Score=49.36 Aligned_cols=67 Identities=22% Similarity=0.274 Sum_probs=42.1
Q ss_pred cCceeEecCCCCCHH----------------HHHHHHHHcCCCCCCceee-eeceecCCCC--------------cHHHH
Q 024923 53 KSPVTICGDIHGQFH----------------DLAELFRIGGKCPDTNYLF-MGDYVDRGYY--------------SVETV 101 (260)
Q Consensus 53 ~~~i~viGDIHG~~~----------------~L~~ll~~~~~~~~~~~vf-lGD~vdrG~~--------------s~evl 101 (260)
.-+|+..+|+||++. .+..++++........+++ .||.+...|. ..-++
T Consensus 41 ~l~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~~~n~llld~GD~~qGs~l~~~~~~~~~~~~~~~~~~i 120 (1163)
T PRK09419 41 NIQILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKENPNTLLVDNGDLIQGNPLGEYAVKDNILFKNKTHPMI 120 (1163)
T ss_pred EEEEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHhCCCeEEEeCCCccCCChhhhHHhhhccccCCCcCHHH
Confidence 347999999999863 3344555543323334444 8999976541 12355
Q ss_pred HHHHhcchhCCCcEEEECCCcch
Q 024923 102 TLLVSLKVRYPQRITILRGNHES 124 (260)
Q Consensus 102 ~~l~~lk~~~p~~v~~lrGNHE~ 124 (260)
..+..+.- =....||||.
T Consensus 121 ~~mN~lgy-----Da~~lGNHEF 138 (1163)
T PRK09419 121 KAMNALGY-----DAGTLGNHEF 138 (1163)
T ss_pred HHHhhcCc-----cEEeeccccc
Confidence 55655542 3567999996
No 118
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=87.36 E-value=1.5 Score=41.41 Aligned_cols=69 Identities=20% Similarity=0.374 Sum_probs=50.9
Q ss_pred cCceeEecCCCCCHHHHHHHHHHcCCC--CCCceeeeeceecCCCCcHHHHHHHHhcchhCCCcEEEECCCc
Q 024923 53 KSPVTICGDIHGQFHDLAELFRIGGKC--PDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNH 122 (260)
Q Consensus 53 ~~~i~viGDIHG~~~~L~~ll~~~~~~--~~~~~vflGD~vdrG~~s~evl~~l~~lk~~~p~~v~~lrGNH 122 (260)
+.+|.|+||.-|+++.|.+-.+++... |-+.++++||+.+-...+.|++.+...-+ ..|--++++-+|-
T Consensus 5 ~~kILv~Gd~~Gr~~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng~~-~vPiptY~~g~~~ 75 (528)
T KOG2476|consen 5 DAKILVCGDVEGRFDELIKRIQKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNGTK-KVPIPTYFLGDNA 75 (528)
T ss_pred CceEEEEcCccccHHHHHHHHHHHhhcCCCceEEEEecccCCCccchhHHHHHhcCCc-cCceeEEEecCCC
Confidence 468999999999999998877766433 34778899999987667777777766543 3444466766665
No 119
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=87.00 E-value=1 Score=36.29 Aligned_cols=60 Identities=27% Similarity=0.375 Sum_probs=43.6
Q ss_pred eeEecCCCC--CHHHHHHHHHHcCCCCC-CceeeeeceecCCCCcHHHHHHHHhcchhCCCcEEEECCCcch
Q 024923 56 VTICGDIHG--QFHDLAELFRIGGKCPD-TNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHES 124 (260)
Q Consensus 56 i~viGDIHG--~~~~L~~ll~~~~~~~~-~~~vflGD~vdrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~ 124 (260)
+.|+||+|= ...+|-.-|+++-.+++ ..++++|++. |.|+.+++..+. +.++++||--|.
T Consensus 3 vL~lgD~HiP~Ra~~Lp~KFkklLvPgki~hilctGNlc-----s~e~~dylk~l~----~dvhiVrGeFD~ 65 (183)
T KOG3325|consen 3 VLVLGDLHIPHRANDLPAKFKKLLVPGKIQHILCTGNLC-----SKESYDYLKTLS----SDVHIVRGEFDE 65 (183)
T ss_pred EEEeccccCCccccccCHHHHhccCCCceeEEEEeCCcc-----hHHHHHHHHhhC----CCcEEEecccCc
Confidence 678999983 34445455555444443 6688999976 679999999886 469999998555
No 120
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=86.17 E-value=1.1 Score=39.68 Aligned_cols=66 Identities=20% Similarity=0.266 Sum_probs=42.3
Q ss_pred cCceeEecCCCCCHHHHHHHHHHcCCCCCCceeeeeceecCCCCcHHHHHHHHhcchhCC-CcEEEECCCcchhh
Q 024923 53 KSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYP-QRITILRGNHESRQ 126 (260)
Q Consensus 53 ~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vflGD~vdrG~~s~evl~~l~~lk~~~p-~~v~~lrGNHE~~~ 126 (260)
..+++.|+|.|+...... ..++.|-++.+||+-.-| .+.||..+=..+.. .| ..=+.|+||||...
T Consensus 61 ~~r~VcisdtH~~~~~i~------~~p~gDvlihagdfT~~g-~~~ev~~fn~~~gs-lph~yKIVIaGNHELtF 127 (305)
T KOG3947|consen 61 YARFVCISDTHELTFDIN------DIPDGDVLIHAGDFTNLG-LPEEVIKFNEWLGS-LPHEYKIVIAGNHELTF 127 (305)
T ss_pred ceEEEEecCcccccCccc------cCCCCceEEeccCCcccc-CHHHHHhhhHHhcc-CcceeeEEEeeccceee
Confidence 457999999998665433 234456667899997644 45566555433322 22 13478999999854
No 121
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=85.68 E-value=1.2 Score=41.72 Aligned_cols=72 Identities=11% Similarity=0.062 Sum_probs=42.0
Q ss_pred ccCceeEecCCC-CCHHHHH--HHHHHc-CCCCCCceeeeeceecCCCCcHH------HHHHHHhcc---hhCCCcEEEE
Q 024923 52 VKSPVTICGDIH-GQFHDLA--ELFRIG-GKCPDTNYLFMGDYVDRGYYSVE------TVTLLVSLK---VRYPQRITIL 118 (260)
Q Consensus 52 ~~~~i~viGDIH-G~~~~L~--~ll~~~-~~~~~~~~vflGD~vdrG~~s~e------vl~~l~~lk---~~~p~~v~~l 118 (260)
...+++++||-= |.+.... +.+..+ ...+.+-+|-+||-++.|..+.. ..+.+..-. ..-| .+++
T Consensus 25 ~~l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~P--wy~v 102 (394)
T PTZ00422 25 AQLRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDMQIP--FFTV 102 (394)
T ss_pred CeEEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhhCCC--eEEe
Confidence 345899999953 3333221 223332 23345667779999887776433 334443211 1234 8999
Q ss_pred CCCcchh
Q 024923 119 RGNHESR 125 (260)
Q Consensus 119 rGNHE~~ 125 (260)
.||||..
T Consensus 103 LGNHDy~ 109 (394)
T PTZ00422 103 LGQADWD 109 (394)
T ss_pred CCccccc
Confidence 9999973
No 122
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=85.06 E-value=0.9 Score=42.95 Aligned_cols=74 Identities=19% Similarity=0.147 Sum_probs=41.0
Q ss_pred ccCceeEecCCCCCHHHHHHHHHHcCCC-CCCceeeeeceecCCCCcHHH----HHHHHhcchhCCCcEEEECCCcchhh
Q 024923 52 VKSPVTICGDIHGQFHDLAELFRIGGKC-PDTNYLFMGDYVDRGYYSVET----VTLLVSLKVRYPQRITILRGNHESRQ 126 (260)
Q Consensus 52 ~~~~i~viGDIHG~~~~L~~ll~~~~~~-~~~~~vflGD~vdrG~~s~ev----l~~l~~lk~~~p~~v~~lrGNHE~~~ 126 (260)
...++.|+||+= +...=...+...... ..+-++++||+..--..+.+. .+++.-+-..-| ..+.-||||.-.
T Consensus 146 ~~~~~~i~GDlG-~~~~~~s~~~~~~~~~k~d~vlhiGDlsYa~~~~n~~wD~f~r~vEp~As~vP--ymv~~GNHE~d~ 222 (452)
T KOG1378|consen 146 SPTRAAIFGDMG-CTEPYTSTLRNQEENLKPDAVLHIGDLSYAMGYSNWQWDEFGRQVEPIASYVP--YMVCSGNHEIDW 222 (452)
T ss_pred CceeEEEEcccc-ccccccchHhHHhcccCCcEEEEecchhhcCCCCccchHHHHhhhhhhhccCc--eEEecccccccC
Confidence 345899999983 433332233322222 356788999986322222122 223333333344 578899999976
Q ss_pred hh
Q 024923 127 IT 128 (260)
Q Consensus 127 ~~ 128 (260)
.+
T Consensus 223 ~~ 224 (452)
T KOG1378|consen 223 PP 224 (452)
T ss_pred CC
Confidence 54
No 123
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=84.41 E-value=1.9 Score=42.14 Aligned_cols=66 Identities=18% Similarity=0.151 Sum_probs=40.1
Q ss_pred ceeEecCCCCCHHH---------------------HHHHHHHcCC-CCCCceeeeeceecCCCCc-----HHHHHHHHhc
Q 024923 55 PVTICGDIHGQFHD---------------------LAELFRIGGK-CPDTNYLFMGDYVDRGYYS-----VETVTLLVSL 107 (260)
Q Consensus 55 ~i~viGDIHG~~~~---------------------L~~ll~~~~~-~~~~~~vflGD~vdrG~~s-----~evl~~l~~l 107 (260)
.|+-+.|+||++.. +..++++... .++..++..||.+...+.+ ...++.+.++
T Consensus 2 tILhtND~Hg~l~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~n~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~~ 81 (550)
T TIGR01530 2 SIIHINDHHSHLEPEELEIALAGEQLKAAIGGFAALNAEINKLRAESKNALVLHAGDAIIGTLYFTLFGGRADAALMNAA 81 (550)
T ss_pred EEEEEccccccccCcccccccCCCccccccCCHHHHHHHHHHHHhhCCCeEEEECCCCCCCccchhhcCCHHHHHHHhcc
Confidence 35677888887533 3444554432 2334455699998755432 3356666666
Q ss_pred chhCCCcEEEECCCcchh
Q 024923 108 KVRYPQRITILRGNHESR 125 (260)
Q Consensus 108 k~~~p~~v~~lrGNHE~~ 125 (260)
.. -.+..||||.-
T Consensus 82 g~-----Da~~lGNHEFd 94 (550)
T TIGR01530 82 GF-----DFFTLGNHEFD 94 (550)
T ss_pred CC-----CEEEecccccc
Confidence 53 46888999973
No 124
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=83.51 E-value=1.6 Score=44.68 Aligned_cols=67 Identities=21% Similarity=0.164 Sum_probs=42.4
Q ss_pred cCceeEecCCCCCHHH----------------HHHHHHHcCCC-CCCceeeeeceecCCCCc--------------HHHH
Q 024923 53 KSPVTICGDIHGQFHD----------------LAELFRIGGKC-PDTNYLFMGDYVDRGYYS--------------VETV 101 (260)
Q Consensus 53 ~~~i~viGDIHG~~~~----------------L~~ll~~~~~~-~~~~~vflGD~vdrG~~s--------------~evl 101 (260)
+.+|+-..|+||++.. +..++++.... ++..+|-.||++..-|.+ .-++
T Consensus 115 ~LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~i 194 (814)
T PRK11907 115 DVRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPMY 194 (814)
T ss_pred EEEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhhccccccCcchHHH
Confidence 4579999999999643 23344444322 334455699999754432 1266
Q ss_pred HHHHhcchhCCCcEEEECCCcch
Q 024923 102 TLLVSLKVRYPQRITILRGNHES 124 (260)
Q Consensus 102 ~~l~~lk~~~p~~v~~lrGNHE~ 124 (260)
+.+..|.- -....||||.
T Consensus 195 ~amN~LGy-----DA~tLGNHEF 212 (814)
T PRK11907 195 AALEALGF-----DAGTLGNHEF 212 (814)
T ss_pred HHHhccCC-----CEEEechhhc
Confidence 66766652 3678899996
No 125
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=83.04 E-value=3 Score=37.32 Aligned_cols=73 Identities=15% Similarity=0.297 Sum_probs=46.7
Q ss_pred cCceeEecCCC----CCHHHHHHHHHHcC-CCC----CCceeeeeceecCC----CCc----HHHHHHHHhc-chhCC--
Q 024923 53 KSPVTICGDIH----GQFHDLAELFRIGG-KCP----DTNYLFMGDYVDRG----YYS----VETVTLLVSL-KVRYP-- 112 (260)
Q Consensus 53 ~~~i~viGDIH----G~~~~L~~ll~~~~-~~~----~~~~vflGD~vdrG----~~s----~evl~~l~~l-k~~~p-- 112 (260)
..+++|+||+| -.+++|.++|+... ..+ ...+|++|+++.+. ..+ .+-.+.|..+ ...+|
T Consensus 27 ~~~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~fp~L 106 (291)
T PTZ00235 27 RHNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKFKLI 106 (291)
T ss_pred ceEEEEEEeeccCCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhChHH
Confidence 45799999999 55777778888762 212 45688999998652 222 2233333331 22333
Q ss_pred ---CcEEEECCCcchh
Q 024923 113 ---QRITILRGNHESR 125 (260)
Q Consensus 113 ---~~v~~lrGNHE~~ 125 (260)
.++++|+|-.|-.
T Consensus 107 ~~~s~fVFVPGpnDPw 122 (291)
T PTZ00235 107 LEHCYLIFIPGINDPC 122 (291)
T ss_pred HhcCeEEEECCCCCCC
Confidence 4899999998874
No 126
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=82.55 E-value=0.92 Score=42.92 Aligned_cols=42 Identities=26% Similarity=0.436 Sum_probs=34.3
Q ss_pred CCceeeeeceecCCCCcHHHHHHHHhcchhCCCcEEEECCCcchhhh
Q 024923 81 DTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQI 127 (260)
Q Consensus 81 ~~~~vflGD~vdrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~ 127 (260)
.+.+=.+||+-||||++-.+++.|...- .+=+=.||||--++
T Consensus 191 VDhLHiVGDIyDRGP~pd~Imd~L~~yh-----svDiQWGNHDilWm 232 (648)
T COG3855 191 VDHLHIVGDIYDRGPYPDKIMDTLINYH-----SVDIQWGNHDILWM 232 (648)
T ss_pred hhheeeecccccCCCCchHHHHHHhhcc-----cccccccCcceEEe
Confidence 3556679999999999999999998763 46677899998654
No 127
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=82.49 E-value=1.5 Score=42.80 Aligned_cols=68 Identities=19% Similarity=0.086 Sum_probs=40.0
Q ss_pred cCceeEecCCCCCHH----------HHHHHHHHcC-----CCCCCceeeeeceecCCCC-----cHHHHHHHHhcchhCC
Q 024923 53 KSPVTICGDIHGQFH----------DLAELFRIGG-----KCPDTNYLFMGDYVDRGYY-----SVETVTLLVSLKVRYP 112 (260)
Q Consensus 53 ~~~i~viGDIHG~~~----------~L~~ll~~~~-----~~~~~~~vflGD~vdrG~~-----s~evl~~l~~lk~~~p 112 (260)
+..|+-+.|+||++. .+..++++.. ..++..++..||.+...+. ..-+++.+..+...
T Consensus 34 ~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~mN~~g~D-- 111 (551)
T PRK09558 34 KITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLIGYD-- 111 (551)
T ss_pred EEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhhhhcCCchhHHHHhcCCCC--
Confidence 457999999999874 2233444332 1233445568999864332 22345566666532
Q ss_pred CcEEEECCCcchh
Q 024923 113 QRITILRGNHESR 125 (260)
Q Consensus 113 ~~v~~lrGNHE~~ 125 (260)
+ +..||||.-
T Consensus 112 --a-~tlGNHEFD 121 (551)
T PRK09558 112 --A-MAVGNHEFD 121 (551)
T ss_pred --E-EcccccccC
Confidence 4 445999974
No 128
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=82.10 E-value=3.1 Score=40.24 Aligned_cols=53 Identities=19% Similarity=0.197 Sum_probs=40.1
Q ss_pred cCceeEecCCCC------------CHHHHHHHHHHcCCCCCCceeeeeceecCCCCcHHHHHHHH
Q 024923 53 KSPVTICGDIHG------------QFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLV 105 (260)
Q Consensus 53 ~~~i~viGDIHG------------~~~~L~~ll~~~~~~~~~~~vflGD~vdrG~~s~evl~~l~ 105 (260)
..||.|-.|+|= .+..|..+|..+.....+.++.-||+..-..-|..+|....
T Consensus 13 tirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNkPSr~~L~~~i 77 (646)
T KOG2310|consen 13 TIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENKPSRKTLHRCL 77 (646)
T ss_pred ceEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccCCccHHHHHHHH
Confidence 458999999994 35667888888776677778889999987777777655443
No 129
>KOG3339 consensus Predicted glycosyltransferase [General function prediction only]
Probab=81.38 E-value=17 Score=30.53 Aligned_cols=85 Identities=19% Similarity=0.280 Sum_probs=62.7
Q ss_pred CceeeeeceecCCCCcHHHHHHHHhcchhCCCcEEEECCCcchhhhhhhhcch----------------HHHHHHhCChh
Q 024923 82 TNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFY----------------DECLRKYGNAN 145 (260)
Q Consensus 82 ~~~vflGD~vdrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~~~----------------~e~~~~~~~~~ 145 (260)
..+|++| .|.+..|+++++..++..+-++.++ .|+-|.|..++...|. .|.-+.|. ..
T Consensus 40 ~~lVvlG----SGGHT~EMlrLl~~l~~~y~~r~yI-~a~tD~mS~~k~~~F~~~~a~~~a~~~~ipRsReVgQS~l-tS 113 (211)
T KOG3339|consen 40 STLVVLG----SGGHTGEMLRLLEALQDLYSPRSYI-AADTDEMSEQKARSFELSLAHCKAKNYEIPRSREVGQSWL-TS 113 (211)
T ss_pred eEEEEEc----CCCcHHHHHHHHHHHHhhcCceEEE-EecCchhhHHHHHhhhccccccchhheecchhhhhhhhhh-hh
Confidence 4477886 5889999999999999888776555 8999999877655443 12233331 35
Q ss_pred hHHHHHHHhhcCCeEEEEcCcEEEEcC
Q 024923 146 VWKIFTDLFDYFPLTALVESEIFCLHG 172 (260)
Q Consensus 146 ~~~~~~~~~~~lP~~~~i~~~~l~vHg 172 (260)
++..+...+.++++.+.+..+++.+-|
T Consensus 114 v~Tti~all~s~~lv~RirPdlil~NG 140 (211)
T KOG3339|consen 114 VFTTIWALLQSFVLVWRIRPDLILCNG 140 (211)
T ss_pred HHHHHHHHHHHheEEEecCCCEEEECC
Confidence 667777888888998888778888887
No 130
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=77.70 E-value=3 Score=42.53 Aligned_cols=67 Identities=21% Similarity=0.154 Sum_probs=41.4
Q ss_pred cCceeEecCCCCCHHH----------------HHHHHHHcCCC-CCCceeeeeceecCCCCc------------------
Q 024923 53 KSPVTICGDIHGQFHD----------------LAELFRIGGKC-PDTNYLFMGDYVDRGYYS------------------ 97 (260)
Q Consensus 53 ~~~i~viGDIHG~~~~----------------L~~ll~~~~~~-~~~~~vflGD~vdrG~~s------------------ 97 (260)
.-+|+-..|+||++.. +..++++.... ++..+|-.||++...|.+
T Consensus 39 ~L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqGspl~~~~~~~~~~~~~~~~~~~ 118 (780)
T PRK09418 39 NLRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQGTPLGDYVANKINDPKKPVDPSY 118 (780)
T ss_pred EEEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCCchHHHHHhhccccccccccccc
Confidence 4589999999999632 33345444322 334455699988533221
Q ss_pred -HHHHHHHHhcchhCCCcEEEECCCcch
Q 024923 98 -VETVTLLVSLKVRYPQRITILRGNHES 124 (260)
Q Consensus 98 -~evl~~l~~lk~~~p~~v~~lrGNHE~ 124 (260)
.-+++.+..+.- =....||||.
T Consensus 119 ~~p~i~~mN~lgy-----Da~tlGNHEF 141 (780)
T PRK09418 119 THPLYRLMNLMKY-----DVISLGNHEF 141 (780)
T ss_pred chHHHHHHhccCC-----CEEecccccc
Confidence 235666666652 3678899995
No 131
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=66.66 E-value=3.9 Score=36.36 Aligned_cols=69 Identities=26% Similarity=0.343 Sum_probs=42.1
Q ss_pred cCceeEecCC--CCCHHHHHHHHHH--cCC-CCCCceeeeecee-cCCCCcHH------HHHHHH---hcchhCCCcEEE
Q 024923 53 KSPVTICGDI--HGQFHDLAELFRI--GGK-CPDTNYLFMGDYV-DRGYYSVE------TVTLLV---SLKVRYPQRITI 117 (260)
Q Consensus 53 ~~~i~viGDI--HG~~~~L~~ll~~--~~~-~~~~~~vflGD~v-drG~~s~e------vl~~l~---~lk~~~p~~v~~ 117 (260)
+-+++||||- +|.+..-+..+.. +|. -+.+-+|-+||-+ |.|..+.. ...-+. .|++ | .+.
T Consensus 43 slsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~pSLQk--p--Wy~ 118 (336)
T KOG2679|consen 43 SLSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTAPSLQK--P--WYS 118 (336)
T ss_pred ceEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCCCChhHHhhhhhcccCccccc--c--hhh
Confidence 4489999995 7777766555543 332 2335566799965 55654321 222222 3443 3 689
Q ss_pred ECCCcchh
Q 024923 118 LRGNHESR 125 (260)
Q Consensus 118 lrGNHE~~ 125 (260)
|.||||.+
T Consensus 119 vlGNHDyr 126 (336)
T KOG2679|consen 119 VLGNHDYR 126 (336)
T ss_pred hccCcccc
Confidence 99999996
No 132
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=58.73 E-value=8.4 Score=38.01 Aligned_cols=25 Identities=24% Similarity=0.569 Sum_probs=21.9
Q ss_pred ccCceeEecCCCCCHHHHHHHHHHc
Q 024923 52 VKSPVTICGDIHGQFHDLAELFRIG 76 (260)
Q Consensus 52 ~~~~i~viGDIHG~~~~L~~ll~~~ 76 (260)
.++.-.+++||||.+++|..+|+..
T Consensus 31 PKGTEhF~SDlHGEyeAF~HiLrn~ 55 (640)
T PF06874_consen 31 PKGTEHFMSDLHGEYEAFDHILRNG 55 (640)
T ss_pred CCCceEeeeccccchHHHHHHHHcC
Confidence 4677899999999999999999764
No 133
>PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family.; InterPro: IPR004101 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) [], MurD (6.3.2.9 from EC) [], MurE (6.3.2.13 from EC) [] and MurF (6.3.2.10 from EC) []. These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales []. This entry represents the C-terminal domain from all four stage 2 Mur enzymes: UDP-N-acetylmuramate-L-alanine ligase (MurC), UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (MurE), and UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (MurF). This entry also includes the C-terminal domain of folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) []. The C-terminal domain is almost always associated with the cytoplasmic peptidoglycan synthetases, N-terminal domain (see IPR000713 from INTERPRO).; GO: 0005524 ATP binding, 0016874 ligase activity, 0009058 biosynthetic process; PDB: 2Y68_A 3UAG_A 4UAG_A 2UAG_A 1E0D_A 2XPC_A 2WJP_A 2VTE_A 2Y67_A 1EEH_A ....
Probab=50.95 E-value=31 Score=24.64 Aligned_cols=68 Identities=12% Similarity=0.060 Sum_probs=43.9
Q ss_pred CceeEecCCCCCHHHHHHHHHHcCC--CCCCceeeeeceecCCCCcHHHHHHHHhcchhCCCcEEEECCC
Q 024923 54 SPVTICGDIHGQFHDLAELFRIGGK--CPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGN 121 (260)
Q Consensus 54 ~~i~viGDIHG~~~~L~~ll~~~~~--~~~~~~vflGD~vdrG~~s~evl~~l~~lk~~~p~~v~~lrGN 121 (260)
..+.||=|---+.+.+..+++.+.. +....++.+|+.-|.|..+.+....+.++...+...+++...|
T Consensus 12 ~~~~vi~D~ahNp~s~~a~l~~l~~~~~~~~~i~V~G~~~d~g~~~~~~~~~~~~~~~~~~d~vi~~~~~ 81 (91)
T PF02875_consen 12 NGPTVIDDYAHNPDSIRALLEALKELYPKGRIIAVFGAMGDLGSKDKDFHEEIGELAAQLADVVILTGDN 81 (91)
T ss_dssp TTEEEEEET--SHHHHHHHHHHHHHHCTTSEEEEEEEEBTT-HTSHHHCHHHHHHHHTTCSSEEEEETSB
T ss_pred CCcEEEEECCCCHHHHHHHHHHHHHhccCCcEEEEEccccccccccHHHHHHHHHHHHhcCCEEEEcCCC
Confidence 3567888877888999888877632 3445567899999988877776666665555545554444444
No 134
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=49.98 E-value=65 Score=28.15 Aligned_cols=59 Identities=15% Similarity=0.139 Sum_probs=38.7
Q ss_pred ceeEecCCCCCHHHHHHHHHHcCCCCCCceeeeeceecCCCCcHHHHHHHHhcchhCCCcEEEECCCcch
Q 024923 55 PVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHES 124 (260)
Q Consensus 55 ~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vflGD~vdrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~ 124 (260)
.+-+||- |.-..+...+......+.. .+++||-|. ..+.++.+.... +-.+..-|||=.
T Consensus 183 ~vk~VGg--g~ka~i~e~~~ele~~d~s-a~~VGDSIt----Dv~ml~~~rgrG----glAvaFNGNeYa 241 (315)
T COG4030 183 SVKAVGG--GEKAKIMEGYCELEGIDFS-AVVVGDSIT----DVKMLEAARGRG----GLAVAFNGNEYA 241 (315)
T ss_pred hhhhccC--cchhHHHHHHHhhcCCCcc-eeEecCccc----chHHHHHhhccC----ceEEEecCCccc
Confidence 5667776 7777777776666554444 789999873 456666665443 236777888643
No 135
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=47.78 E-value=95 Score=25.17 Aligned_cols=52 Identities=23% Similarity=0.379 Sum_probs=38.8
Q ss_pred eEecCCCCCHHHHHHHHH-HcCC------------CCCCceeeeeceecCCCCcHHHHHHHHhcc
Q 024923 57 TICGDIHGQFHDLAELFR-IGGK------------CPDTNYLFMGDYVDRGYYSVETVTLLVSLK 108 (260)
Q Consensus 57 ~viGDIHG~~~~L~~ll~-~~~~------------~~~~~~vflGD~vdrG~~s~evl~~l~~lk 108 (260)
++.+=..||-..+.+.+. .++. .+..++||+|-.+|+|.-+-++.++|..++
T Consensus 2 IvYsS~TGNTkkvA~aI~~~l~~~~~~~~~~~~~~~~~yD~i~lG~w~d~G~~d~~~~~fl~~l~ 66 (160)
T PF12641_consen 2 IVYSSRTGNTKKVAEAIAEALGAKDIVSVEEPPEDLEDYDLIFLGFWIDKGTPDKDMKEFLKKLK 66 (160)
T ss_pred EEEECCCChHHHHHHHHHHHCCCceeEeccccccCCCCCCEEEEEcCccCCCCCHHHHHHHHHcc
Confidence 455666777777766443 2322 234679999999999999999999999986
No 136
>cd01533 4RHOD_Repeat_2 Member of the Rhodanese Homology Domain superfamily, repeat 2. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 2nd repeat which does contain the putative catalytic Cys residue.
Probab=39.66 E-value=1.2e+02 Score=22.13 Aligned_cols=88 Identities=17% Similarity=0.117 Sum_probs=45.1
Q ss_pred cCCCCCHHHHHHHHHHHHHHHhcCCCcccccCc-----eeEecCCCCCHHHHHHHHHHcCCCCCCceeeeeceecCCCCc
Q 024923 23 QCKPLSEQEVRVLCEKAKEILMDESNVQPVKSP-----VTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYS 97 (260)
Q Consensus 23 ~~~~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~-----i~viGDIHG~~~~L~~ll~~~~~~~~~~~vflGD~vdrG~~s 97 (260)
..+.++.+++.+++++. ....++++..+ --+-|-+|=-+..|...+..++..+...+|+. +..|..|
T Consensus 8 ~~~~i~~~~l~~~~~~~-----~~~~liDvR~~~e~~~ghIpgainip~~~l~~~~~~l~~~~~~~ivv~---C~~G~rs 79 (109)
T cd01533 8 HTPSVSADELAALQARG-----APLVVLDGRRFDEYRKMTIPGSVSCPGAELVLRVGELAPDPRTPIVVN---CAGRTRS 79 (109)
T ss_pred cCCcCCHHHHHHHHhcC-----CCcEEEeCCCHHHHhcCcCCCceeCCHHHHHHHHHhcCCCCCCeEEEE---CCCCchH
Confidence 33456666666655321 01234554321 12334344456666666666654444455554 3457777
Q ss_pred HHHHHHHHhcchhCCCcEEEECC
Q 024923 98 VETVTLLVSLKVRYPQRITILRG 120 (260)
Q Consensus 98 ~evl~~l~~lk~~~p~~v~~lrG 120 (260)
......|..+. +++.++.|.|
T Consensus 80 ~~a~~~L~~~G--~~~~v~~l~g 100 (109)
T cd01533 80 IIGAQSLINAG--LPNPVAALRN 100 (109)
T ss_pred HHHHHHHHHCC--CCcceeEecC
Confidence 76777776554 3222666655
No 137
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=37.17 E-value=22 Score=31.54 Aligned_cols=39 Identities=28% Similarity=0.468 Sum_probs=25.7
Q ss_pred ceeeeeceecCCCCcHHH-HHHHHhcchhCCCcEEEECCCcchh
Q 024923 83 NYLFMGDYVDRGYYSVET-VTLLVSLKVRYPQRITILRGNHESR 125 (260)
Q Consensus 83 ~~vflGD~vdrG~~s~ev-l~~l~~lk~~~p~~v~~lrGNHE~~ 125 (260)
+++|+||+|.+ ...++ -..|-+++..++..+++. |-|..
T Consensus 2 ~ilfiGDi~G~--~Gr~~l~~~L~~lk~~~~~D~vIa--NgEn~ 41 (266)
T TIGR00282 2 KFLFIGDVYGK--AGRKIVKNNLPQLKSKYQADLVIA--NGENT 41 (266)
T ss_pred eEEEEEecCCH--HHHHHHHHHHHHHHHhCCCCEEEE--cCccc
Confidence 58999999954 33443 455777888877555544 65654
No 138
>PRK10773 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Reviewed
Probab=36.75 E-value=1.1e+02 Score=28.92 Aligned_cols=66 Identities=11% Similarity=0.103 Sum_probs=46.8
Q ss_pred CceeEecCCCC-CHHHHHHHHHHcCCCCCCceeeeeceecCCCCcHHHHHHHHhcchhC-CCcEEEECC
Q 024923 54 SPVTICGDIHG-QFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRY-PQRITILRG 120 (260)
Q Consensus 54 ~~i~viGDIHG-~~~~L~~ll~~~~~~~~~~~vflGD~vdrG~~s~evl~~l~~lk~~~-p~~v~~lrG 120 (260)
..+.+|=|-+. +.+.+.+.|+.+...+..+++.+||+..-|+.+.+.-..+-+.-... .+.++++ |
T Consensus 325 ~g~~iIDDsYn~nP~s~~aaL~~l~~~~~r~i~VlG~m~elG~~~~~~h~~~~~~~~~~~~d~v~~~-G 392 (453)
T PRK10773 325 EGQLLLDDSYNANVGSMTAAAQVLAEMPGYRVMVVGDMAELGAESEACHRQVGEAAKAAGIDKVLSV-G 392 (453)
T ss_pred CCeEEEEcCCCCCHHHHHHHHHHHHhCCCCEEEEECChhhcchHHHHHHHHHHHHHHHcCCCEEEEE-C
Confidence 45788999655 68899988887654345678889999999999988776665543322 3445444 6
No 139
>PF13258 DUF4049: Domain of unknown function (DUF4049)
Probab=36.08 E-value=49 Score=28.94 Aligned_cols=87 Identities=26% Similarity=0.350 Sum_probs=43.9
Q ss_pred Cceeeeecee-cCCC---CcHHHHHHHHhcch-------hCCCcEEEECCCcchhhhhhhhcchHHHHHHhC--ChhhHH
Q 024923 82 TNYLFMGDYV-DRGY---YSVETVTLLVSLKV-------RYPQRITILRGNHESRQITQVYGFYDECLRKYG--NANVWK 148 (260)
Q Consensus 82 ~~~vflGD~v-drG~---~s~evl~~l~~lk~-------~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~--~~~~~~ 148 (260)
+..+||||-. ||-. ...=++.+|.++.. +--++|++|.||||.-.- |.+.+...... ..+.
T Consensus 86 tpciflgdhtgdrfsti~gd~yiltllnsm~nme~nkdsrinknvvvlagnhein~n----gny~arlanhkls~gDT-- 159 (318)
T PF13258_consen 86 TPCIFLGDHTGDRFSTIFGDQYILTLLNSMRNMEGNKDSRINKNVVVLAGNHEINFN----GNYMARLANHKLSAGDT-- 159 (318)
T ss_pred ccceeecCcccchhhhhcchHHHHHHHHHHHhcccccccccccceEEEecCceeccC----chHHHHHhhCCCCccch--
Confidence 4578888865 3311 11223444444432 123589999999998431 11222111111 1122
Q ss_pred HHHHHhhcCCeEEEE-cCcEEEEcCCCCC
Q 024923 149 IFTDLFDYFPLTALV-ESEIFCLHGGLSP 176 (260)
Q Consensus 149 ~~~~~~~~lP~~~~i-~~~~l~vHgGi~~ 176 (260)
-+.+..+|.+-.- +.+++-.|-||-.
T Consensus 160 --YnlIKtldVC~YD~erkvltsHHGIir 186 (318)
T PF13258_consen 160 --YNLIKTLDVCNYDPERKVLTSHHGIIR 186 (318)
T ss_pred --hhccccccccccCcchhhhhcccCcee
Confidence 2345666755431 2467888888754
No 140
>PRK04531 acetylglutamate kinase; Provisional
Probab=35.88 E-value=39 Score=31.75 Aligned_cols=36 Identities=11% Similarity=0.094 Sum_probs=21.7
Q ss_pred CHHHHHHHHHHcCCCCCCceeeeeceecCCCCcHHHHHHHHhcchhCCCcEEEE
Q 024923 65 QFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITIL 118 (260)
Q Consensus 65 ~~~~L~~ll~~~~~~~~~~~vflGD~vdrG~~s~evl~~l~~lk~~~p~~v~~l 118 (260)
..+.+.++|+.++ ...|+..++...+...|.++++|
T Consensus 6 ~~~~~~~~l~~~~------------------~~~e~~~~l~~F~~~~~~~~~VI 41 (398)
T PRK04531 6 TRQIIVRLLSSMA------------------SAKEISQYLKRFSQLDAERFAVI 41 (398)
T ss_pred hHHHHHHHHHhcC------------------ChhhhHHHHHHHhCcCCCcEEEE
Confidence 4456666777664 33577777777765455554444
No 141
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=35.08 E-value=30 Score=30.39 Aligned_cols=39 Identities=31% Similarity=0.401 Sum_probs=26.1
Q ss_pred ceeeeeceecCCCCcH-HHHHHHHhcchhCCCcEEEECCCcchh
Q 024923 83 NYLFMGDYVDRGYYSV-ETVTLLVSLKVRYPQRITILRGNHESR 125 (260)
Q Consensus 83 ~~vflGD~vdrG~~s~-evl~~l~~lk~~~p~~v~~lrGNHE~~ 125 (260)
+++|+||+|.+. .. -+...|.+++..++..+++. |-|..
T Consensus 1 ~ilfigdi~g~~--G~~~~~~~l~~lk~~~~~D~vi~--NgEn~ 40 (255)
T cd07382 1 KILFIGDIVGKP--GRKAVKEHLPKLKKEYKIDFVIA--NGENA 40 (255)
T ss_pred CEEEEEeCCCHH--HHHHHHHHHHHHHHHCCCCEEEE--CCccc
Confidence 478999999653 33 35566778888877555555 55553
No 142
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=27.54 E-value=2.5e+02 Score=20.84 Aligned_cols=43 Identities=23% Similarity=0.553 Sum_probs=27.0
Q ss_pred HHHHHHHHHcCCCCCCceeeeeceecCCCCcHHHHHHHHhcchhCCCcEEEE
Q 024923 67 HDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITIL 118 (260)
Q Consensus 67 ~~L~~ll~~~~~~~~~~~vflGD~vdrG~~s~evl~~l~~lk~~~p~~v~~l 118 (260)
..+.++++. -|..++|++||= |....|+...+. ..+|+++.++
T Consensus 53 ~~i~~i~~~---fP~~kfiLIGDs---gq~DpeiY~~ia---~~~P~~i~ai 95 (100)
T PF09949_consen 53 DNIERILRD---FPERKFILIGDS---GQHDPEIYAEIA---RRFPGRILAI 95 (100)
T ss_pred HHHHHHHHH---CCCCcEEEEeeC---CCcCHHHHHHHH---HHCCCCEEEE
Confidence 344445544 467889999985 445566666554 4578877654
No 143
>COG0634 Hpt Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=26.56 E-value=3.8e+02 Score=22.30 Aligned_cols=76 Identities=18% Similarity=0.263 Sum_probs=53.5
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCCcccccCceeEecCCCCCHHHHHHHHHHcCCC--------------------------
Q 024923 26 PLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKC-------------------------- 79 (260)
Q Consensus 26 ~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~~~-------------------------- 79 (260)
.++++++.+-+.+..+...++-.= ...++||=++|++--+-.++..+.++
T Consensus 11 Lisee~I~~ri~ela~~I~~~y~g----~~~~vv~iLkGs~~F~~dL~r~i~~~~e~dFm~vSSYg~~t~ssg~v~i~kD 86 (178)
T COG0634 11 LISEEQIKARIKELAAQITEDYGG----KDPLVVGVLKGSFPFMADLIRAIDFPLEVDFMHVSSYGGGTSSSGEVKILKD 86 (178)
T ss_pred eeCHHHHHHHHHHHHHHHHHhhCC----CceEEEEEcccchhhHHHHHHhcCCCceeEEEEEeccCCCcccCCceEEecc
Confidence 578999998888887777665432 46789999999998888887766532
Q ss_pred -----CCCceeeeeceecCCCCcHHHHHHHH
Q 024923 80 -----PDTNYLFMGDYVDRGYYSVETVTLLV 105 (260)
Q Consensus 80 -----~~~~~vflGD~vdrG~~s~evl~~l~ 105 (260)
...+++.+=|++|-|---..+.+++.
T Consensus 87 ld~di~grdVLiVeDIiDsG~TLs~i~~~l~ 117 (178)
T COG0634 87 LDEDIKGRDVLIVEDIIDSGLTLSKVRDLLK 117 (178)
T ss_pred cccCCCCCeEEEEecccccChhHHHHHHHHH
Confidence 13457889999987754334444443
No 144
>PF09860 DUF2087: Uncharacterized protein conserved in bacteria (DUF2087); InterPro: IPR018656 This domain, found in various hypothetical prokaryotic proteins and transcriptional activators, has no known function.
Probab=25.99 E-value=83 Score=21.92 Aligned_cols=37 Identities=22% Similarity=0.287 Sum_probs=26.4
Q ss_pred CCCCCCCCccc---HHHHHHHHhcCCCCCHHHHHHHHHHH
Q 024923 3 LDSVPSNSHGN---LDEQIAQLMQCKPLSEQEVRVLCEKA 39 (260)
Q Consensus 3 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~ 39 (260)
|.+.|++.+.. +..+.+.|-.+...++.|+.++|...
T Consensus 3 L~~~P~k~~~r~~iL~~l~~~f~~g~~y~E~EVN~~L~~~ 42 (71)
T PF09860_consen 3 LKRWPSKRKKRLVILEYLASRFEPGREYSEKEVNEILKRF 42 (71)
T ss_pred ccccCccHHHHHHHHHHHHHhCCCCCccCHHHHHHHHHHH
Confidence 56778777654 46666666677788888888877653
No 145
>COG4320 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=25.83 E-value=47 Score=30.40 Aligned_cols=57 Identities=30% Similarity=0.414 Sum_probs=32.5
Q ss_pred hcCCCcccccCceeEecCCC-CCHHHHHHHHHHcCCCCCCceee-eecee--cCCCCcHHHHHHHHhcc
Q 024923 44 MDESNVQPVKSPVTICGDIH-GQFHDLAELFRIGGKCPDTNYLF-MGDYV--DRGYYSVETVTLLVSLK 108 (260)
Q Consensus 44 ~~e~~~~~~~~~i~viGDIH-G~~~~L~~ll~~~~~~~~~~~vf-lGD~v--drG~~s~evl~~l~~lk 108 (260)
++-|-.++..+.+.++||.| |+|.++... +..++| .-|+= --|++..+++.+..+|.
T Consensus 47 ~~~p~~lp~~p~tw~cGD~HLgN~ga~~~~--------~G~V~f~i~DFDe~~~g~~~~DlvRl~~Sl~ 107 (410)
T COG4320 47 KTWPWSLPKTPFTWLCGDAHLGNFGAARNS--------KGNVVFKIADFDEGHLGQYIWDLVRLAVSLV 107 (410)
T ss_pred hcCccccCCCCceEEecccccccchhhccC--------CCceEEEecccchhhccchHHHHHHHHHHHH
Confidence 34455667778899999999 777666532 122333 44431 12455555555555553
No 146
>PF02885 Glycos_trans_3N: Glycosyl transferase family, helical bundle domain Prosite entry for Thymidine and pyrimidine-nucleoside phosphorylases; InterPro: IPR017459 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. The glycosyl transferase family includes anthranilate phosphoribosyltransferase (TrpD, 2.4.2.18 from EC) and thymidine phosphorylase (2.4.2.2 from EC). All these proteins can transfer a phosphorylated ribose substrate. Thymidine phosphorylase (2.4.2.2 from EC) catalyses the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate. This enzyme regulates the availability of thymidine and is therefore essential to nucleic acid metabolism. This N-terminal domain is found in various family 3 glycosyl transferases, including anthranilate phosphoribosyltransferase (TrpD, 2.4.2.18 from EC) and thymidine phosphorylase (2.4.2.2 from EC). All these proteins can transfer a phosphorylated ribose substrate. Thymidine phosphorylase catalyses the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate. This enzyme regulates the availability of thymidine and is therefore essential to nucleic acid metabolism.; PDB: 2DSJ_B 2ELC_B 2BPQ_A 1ZVW_B 3QR9_B 1V8G_B 2WK5_C 2J0F_C 2WK6_B 1UOU_A ....
Probab=25.15 E-value=1.1e+02 Score=20.58 Aligned_cols=27 Identities=19% Similarity=0.282 Sum_probs=18.1
Q ss_pred cHHHHHHHHhcCCCCCHHHHHHHHHHH
Q 024923 13 NLDEQIAQLMQCKPLSEQEVRVLCEKA 39 (260)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~l~~~~ 39 (260)
.+.++++++.+++.++.+++..+++..
T Consensus 1 ~~~~~l~~l~~g~~Ls~~e~~~~~~~i 27 (66)
T PF02885_consen 1 MIKEILKKLRDGEDLSREEAKAAFDAI 27 (66)
T ss_dssp -HHHHHHHHHTT----HHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCCCHHHHHHHHHHH
Confidence 367889999999999999988887653
No 147
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=25.00 E-value=33 Score=32.90 Aligned_cols=24 Identities=25% Similarity=0.607 Sum_probs=20.2
Q ss_pred cCceeEecCCCCCHHHHHHHHHHc
Q 024923 53 KSPVTICGDIHGQFHDLAELFRIG 76 (260)
Q Consensus 53 ~~~i~viGDIHG~~~~L~~ll~~~ 76 (260)
++.=-+++|+||.|++|..+|+..
T Consensus 37 KgTEHF~SDvHGEYeaF~hVLrNg 60 (648)
T COG3855 37 KGTEHFMSDVHGEYEAFNHVLRNG 60 (648)
T ss_pred cchhhhhhhhhchHHHHHHHHHcC
Confidence 455678899999999999999864
No 148
>COG3207 DIT1 Pyoverdine/dityrosine biosynthesis protein [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=24.17 E-value=1.3e+02 Score=26.82 Aligned_cols=42 Identities=19% Similarity=0.221 Sum_probs=29.4
Q ss_pred cccccCceeEecCCCC-------------CH-HHHHHHHHHcCCCCCCceeeeece
Q 024923 49 VQPVKSPVTICGDIHG-------------QF-HDLAELFRIGGKCPDTNYLFMGDY 90 (260)
Q Consensus 49 ~~~~~~~i~viGDIHG-------------~~-~~L~~ll~~~~~~~~~~~vflGD~ 90 (260)
+.+..++|+|+||=|= .| ++|..+.+.++-+....++++||.
T Consensus 101 ~Y~PG~ki~I~SDghvFsD~I~Vdddh~s~Y~d~Lr~m~~~i~~~~i~kI~n~e~~ 156 (330)
T COG3207 101 FYAPGAKITICSDGHVFSDLIRVDDDHISAYQDALRLMIEEIGATHIGKIFNLEDV 156 (330)
T ss_pred hcCCCCEEEEEeCCceehhhccccchhHHHHHHHHHHHHHHcCCCCccceeecchh
Confidence 4556778899988772 22 234556677888778888999885
No 149
>TIGR01143 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase. This family consists of the strictly bacterial MurF gene of peptidoglycan biosynthesis. This enzyme is almost always UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase, but in a few species, MurE adds lysine rather than diaminopimelate. This enzyme acts on the product from MurE activity, and so is also subfamily rather than equivalog. Staphylococcus aureus is an example of species in this MurF protein would differ.
Probab=23.83 E-value=2.4e+02 Score=26.28 Aligned_cols=69 Identities=19% Similarity=0.245 Sum_probs=43.3
Q ss_pred cCceeEecCCC-CCHHHHHHHHHHcCCCCCCceeeeeceecCCCCcHHHHHHHHhcchhCCCcEEEECCC
Q 024923 53 KSPVTICGDIH-GQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGN 121 (260)
Q Consensus 53 ~~~i~viGDIH-G~~~~L~~ll~~~~~~~~~~~vflGD~vdrG~~s~evl~~l~~lk~~~p~~v~~lrGN 121 (260)
...+.+|=|-+ .+.+.+.+.|+.+...+...++.+|+.-.-|..+.+.-..+.+......-..+++-|.
T Consensus 295 ~~~~~vidDsya~np~s~~~al~~l~~~~~r~i~VlG~~~e~G~~~~~~~~~l~~~~~~~~~d~vi~~g~ 364 (417)
T TIGR01143 295 KNGLTLIDDTYNANPDSMRAALDALARFPGKKILVLGDMAELGEYSEELHAEVGRYANSLGIDLVFLVGE 364 (417)
T ss_pred CCCcEEEEcCCCCCHHHHHHHHHHHHhCCCCEEEEEcCchhcChHHHHHHHHHHHHHHHcCCCEEEEECH
Confidence 34578888855 4899999998877543345677899997777777655444443332222123444454
No 150
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=23.77 E-value=2.3e+02 Score=24.19 Aligned_cols=60 Identities=18% Similarity=0.175 Sum_probs=40.3
Q ss_pred cCCCCCHHHHHHHHHHHHHHHhcCCCcccccCceeEecCCC------CCHHHHHHHHHHcCCCCCCceeeeece
Q 024923 23 QCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIH------GQFHDLAELFRIGGKCPDTNYLFMGDY 90 (260)
Q Consensus 23 ~~~~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~viGDIH------G~~~~L~~ll~~~~~~~~~~~vflGD~ 90 (260)
++..+|..+..+.++++.+++++... ..+++.||+- .++..+.++++.+. ...++.-|+.
T Consensus 34 ~Gi~~P~~~~~~~l~rl~~li~~~~~-----d~vIi~GDl~h~~~~~~~~~~~~~~l~~~~---~~v~~V~GNH 99 (225)
T TIGR00024 34 QGVMVPGFQFREIIERALSIADKYGI-----EALIINGDLKHEFKKGLEWRFIREFIEVTF---RDLILIRGNH 99 (225)
T ss_pred cCCcCChhHHHHHHHHHHHHHhhcCC-----CEEEEcCccccccCChHHHHHHHHHHHhcC---CcEEEECCCC
Confidence 45567888888889888888766532 2679999986 33556666776653 2344556765
No 151
>KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism]
Probab=23.59 E-value=1.4e+02 Score=29.38 Aligned_cols=61 Identities=21% Similarity=0.212 Sum_probs=34.7
Q ss_pred HHHHHHHHcCCCC--CCceeeeecee--cCCCCcHH----HHHHHHh-cchhCCC-cEEEECCCcchhhhh
Q 024923 68 DLAELFRIGGKCP--DTNYLFMGDYV--DRGYYSVE----TVTLLVS-LKVRYPQ-RITILRGNHESRQIT 128 (260)
Q Consensus 68 ~L~~ll~~~~~~~--~~~~vflGD~v--drG~~s~e----vl~~l~~-lk~~~p~-~v~~lrGNHE~~~~~ 128 (260)
.+..+|+.++... -|-++..||++ |+++...+ ++..+.+ +..-+|+ -|+...||||-.-.|
T Consensus 196 lies~L~~ike~~~~iD~I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N 266 (577)
T KOG3770|consen 196 LIESALDHIKENHKDIDYIIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVN 266 (577)
T ss_pred HHHHHHHHHHhcCCCCCEEEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHh
Confidence 3455666554322 34456799998 45555433 2222222 2233443 488999999997554
No 152
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=22.19 E-value=2.7e+02 Score=22.44 Aligned_cols=65 Identities=14% Similarity=0.090 Sum_probs=41.4
Q ss_pred CceeEecCCCCCHHHHHHHHHHcCCCCCCceeeeeceecCCCCcHHHHHHHHhcchhCCCcEEEECCC
Q 024923 54 SPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGN 121 (260)
Q Consensus 54 ~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vflGD~vdrG~~s~evl~~l~~lk~~~p~~v~~lrGN 121 (260)
.+++|++. |....+...++..|....-..++..|-+..+.-..+++..+.+.-...|+.++++ |.
T Consensus 109 ~~~~i~Sn--~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~~v-gD 173 (198)
T TIGR01428 109 YRLAILSN--GSPAMLKSLVKHAGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVLFV-AS 173 (198)
T ss_pred CeEEEEeC--CCHHHHHHHHHHCCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEEEE-eC
Confidence 47888887 5667777888888865444556666666665556666666554333346666554 44
No 153
>KOG3425 consensus Uncharacterized conserved protein [Function unknown]
Probab=21.99 E-value=2.4e+02 Score=22.07 Aligned_cols=60 Identities=17% Similarity=0.197 Sum_probs=36.0
Q ss_pred HHHHHHHHHHcCCCCCCceeeeeceecCCCCc-----HHHHHHHHhcchhCCCcEEEE---CCCcchh
Q 024923 66 FHDLAELFRIGGKCPDTNYLFMGDYVDRGYYS-----VETVTLLVSLKVRYPQRITIL---RGNHESR 125 (260)
Q Consensus 66 ~~~L~~ll~~~~~~~~~~~vflGD~vdrG~~s-----~evl~~l~~lk~~~p~~v~~l---rGNHE~~ 125 (260)
+++|.+.++..+....--++|+|+-.|++.+| +...-.+.+--...|..+++| -||-+++
T Consensus 12 ~e~~~~~~~~~~n~~~ifvlF~gskd~~tGqSWCPdCV~AEPvi~~alk~ap~~~~~v~v~VG~rp~W 79 (128)
T KOG3425|consen 12 YESFEETLKNVENGKTIFVLFLGSKDDTTGQSWCPDCVAAEPVINEALKHAPEDVHFVHVYVGNRPYW 79 (128)
T ss_pred HHHHHHHHHHHhCCceEEEEEecccCCCCCCcCCchHHHhhHHHHHHHHhCCCceEEEEEEecCCCcc
Confidence 57788888887654454456899998886543 333333332222456655544 5776664
No 154
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=21.76 E-value=1.1e+02 Score=26.98 Aligned_cols=66 Identities=17% Similarity=0.162 Sum_probs=32.9
Q ss_pred CceeEecCCCCCHHH--HHHHHHHcCCC-CCCceeeeeceecCCC-CcHHHHHHHHhcchhCCCcEEEECCCcch
Q 024923 54 SPVTICGDIHGQFHD--LAELFRIGGKC-PDTNYLFMGDYVDRGY-YSVETVTLLVSLKVRYPQRITILRGNHES 124 (260)
Q Consensus 54 ~~i~viGDIHG~~~~--L~~ll~~~~~~-~~~~~vflGD~vdrG~-~s~evl~~l~~lk~~~p~~v~~lrGNHE~ 124 (260)
||+.++||+-|.... +..-|..+... ..+-+|..|.-.-.|. -..+....+++..+. ++-.|||=.
T Consensus 1 mriLfiGDvvGk~Gr~~v~~~Lp~lk~kyk~dfvI~N~ENaa~G~Git~k~y~~l~~~G~d-----viT~GNH~w 70 (266)
T COG1692 1 MRILFIGDVVGKPGRKAVKEHLPQLKSKYKIDFVIVNGENAAGGFGITEKIYKELLEAGAD-----VITLGNHTW 70 (266)
T ss_pred CeEEEEecccCcchHHHHHHHhHHHHHhhcCcEEEEcCccccCCcCCCHHHHHHHHHhCCC-----EEecccccc
Confidence 467777777776532 33333332211 1233445555554333 234455555555432 456677754
Done!