BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024925
(260 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1SW3|A Chain A, Triosephosphate Isomerase From Gallus Gallus, Loop 6
Mutant T175v
pdb|1SW3|B Chain B, Triosephosphate Isomerase From Gallus Gallus, Loop 6
Mutant T175v
Length = 248
Score = 232 bits (591), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 114/191 (59%), Positives = 136/191 (71%)
Query: 53 NKFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAA 112
KFFVGGNWK NG K+S+ +L+ LN AKL +Y+D + L +I +AA
Sbjct: 4 RKFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSIYLDFARQKLDAKIGVAA 63
Query: 113 QNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGV 172
QN + GAFTGEIS +KDIG WV+LGHSERRHV GE D+ IG+K A+AL+EGLGV
Sbjct: 64 QNCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHALAEGLGV 123
Query: 173 IACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQE 232
IACIGE+L EREAG T V F+Q KA AD + W VV+AYEPVWAIGTGKVATP+QAQE
Sbjct: 124 IACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGKVATPQQAQE 183
Query: 233 VHAALRDWLKN 243
VH LR WLK+
Sbjct: 184 VHEKLRGWLKS 194
>pdb|1TPH|1 Chain 1, 1.8 Angstroms Crystal Structure Of Wild Type Chicken
Triosephosphate Isomerase-Phosphoglycolohydroxamate
Complex
pdb|1TPH|2 Chain 2, 1.8 Angstroms Crystal Structure Of Wild Type Chicken
Triosephosphate Isomerase-Phosphoglycolohydroxamate
Complex
pdb|8TIM|A Chain A, Triose Phosphate Isomerase
pdb|8TIM|B Chain B, Triose Phosphate Isomerase
Length = 247
Score = 230 bits (586), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 113/190 (59%), Positives = 134/190 (70%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQ 113
KFFVGGNWK NG K+S+ +L+ LN AKL +Y+D + L +I +AAQ
Sbjct: 4 KFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSIYLDFARQKLDAKIGVAAQ 63
Query: 114 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 173
N + GAFTGEIS +KDIG WV+LGHSERRHV GE D+ IG+K A+AL+EGLGVI
Sbjct: 64 NCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHALAEGLGVI 123
Query: 174 ACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEV 233
ACIGE+L EREAG T V F+Q KA AD + W VV+AYEPVWAIGTGK ATP+QAQEV
Sbjct: 124 ACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEV 183
Query: 234 HAALRDWLKN 243
H LR WLK
Sbjct: 184 HEKLRGWLKT 193
>pdb|1TPB|1 Chain 1, Offset Of A Catalytic Lesion By A Bound Water Soluble
pdb|1TPB|2 Chain 2, Offset Of A Catalytic Lesion By A Bound Water Soluble
Length = 247
Score = 228 bits (582), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 112/190 (58%), Positives = 134/190 (70%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQ 113
KFFVGGNWK NG K+S+ +L+ LN AKL +Y+D + L +I +AAQ
Sbjct: 4 KFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSIYLDFARQKLDAKIGVAAQ 63
Query: 114 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 173
N + GAFTGEIS +KDIG WV+LGHSERRHV GE D+ IG+K A+AL+EGLGVI
Sbjct: 64 NCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHALAEGLGVI 123
Query: 174 ACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEV 233
ACIGE+L EREAG T V F+Q KA AD + W VV+AY+PVWAIGTGK ATP+QAQEV
Sbjct: 124 ACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYDPVWAIGTGKTATPQQAQEV 183
Query: 234 HAALRDWLKN 243
H LR WLK
Sbjct: 184 HEKLRGWLKT 193
>pdb|1SPQ|A Chain A, Understanding Protein Lids: Structural Analysis Of Active
Hinge Mutants In Triosephosphate Isomerase
pdb|1SPQ|B Chain B, Understanding Protein Lids: Structural Analysis Of Active
Hinge Mutants In Triosephosphate Isomerase
Length = 247
Score = 228 bits (581), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 112/190 (58%), Positives = 134/190 (70%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQ 113
KFFVGGNWK NG K+S+ +L+ LN AKL +Y+D + L +I +AAQ
Sbjct: 4 KFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSIYLDFARQKLDAKIGVAAQ 63
Query: 114 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 173
N + GAFTGEIS +KDIG WV+LGHSERRHV GE D+ IG+K A+AL+EGLGVI
Sbjct: 64 NCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHALAEGLGVI 123
Query: 174 ACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEV 233
ACIGE+L EREAG T V F+Q KA AD + W VV+AYEPVWAIGTGK TP+QAQEV
Sbjct: 124 ACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGKTKTPQQAQEV 183
Query: 234 HAALRDWLKN 243
H LR WLK+
Sbjct: 184 HEKLRGWLKS 193
>pdb|1TPW|A Chain A, Triosephosphate Isomerase Drinks Water To Keep Healthy
pdb|1TPW|B Chain B, Triosephosphate Isomerase Drinks Water To Keep Healthy
Length = 247
Score = 228 bits (581), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 112/190 (58%), Positives = 133/190 (70%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQ 113
KFFVGGNWK NG K+S+ +L+ LN AKL +Y+D + L +I +AAQ
Sbjct: 4 KFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSIYLDFARQKLDAKIGVAAQ 63
Query: 114 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 173
N + GAFTGEIS +KDIG WV+LGH ERRHV GE D+ IG+K A+AL+EGLGVI
Sbjct: 64 NCYKVPKGAFTGEISPAMIKDIGAAWVILGHPERRHVFGESDELIGQKVAHALAEGLGVI 123
Query: 174 ACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEV 233
ACIGE+L EREAG T V F+Q KA AD + W VV+AYEPVWAIGTGK ATP+QAQEV
Sbjct: 124 ACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEV 183
Query: 234 HAALRDWLKN 243
H LR WLK
Sbjct: 184 HEKLRGWLKT 193
>pdb|1TIM|A Chain A, Structure Of Triose Phosphate Isomerase From Chicken
Muscle
pdb|1TIM|B Chain B, Structure Of Triose Phosphate Isomerase From Chicken
Muscle
Length = 247
Score = 227 bits (579), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 111/191 (58%), Positives = 134/191 (70%)
Query: 53 NKFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAA 112
KFFVGGNWK NG ++S+ +L+ L+ AKL +Y+D + L +I +AA
Sbjct: 3 RKFFVGGNWKMNGKRKSLGELIHTLDGAKLSADTEVVCGAPSIYLDFARQKLDAKIGVAA 62
Query: 113 QNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGV 172
QN + GAFTGEIS +KDIG WV+LGHSERRHV GE D+ IG+K A+AL+EGLGV
Sbjct: 63 QNCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHALAEGLGV 122
Query: 173 IACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQE 232
IACIGE+L EREAG T V FQ+ KA AD + W VV+AYEPVWAIGTGK ATP+QAQE
Sbjct: 123 IACIGEKLDEREAGITEKVVFQETKAIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQE 182
Query: 233 VHAALRDWLKN 243
VH LR WLK
Sbjct: 183 VHEKLRGWLKT 193
>pdb|1R2R|A Chain A, Crystal Structure Of Rabbit Muscle Triosephosphate
Isomerase
pdb|1R2R|B Chain B, Crystal Structure Of Rabbit Muscle Triosephosphate
Isomerase
pdb|1R2R|C Chain C, Crystal Structure Of Rabbit Muscle Triosephosphate
Isomerase
pdb|1R2R|D Chain D, Crystal Structure Of Rabbit Muscle Triosephosphate
Isomerase
pdb|1R2S|A Chain A, Crystal Structure Of Rabbit Muscle Triosephosphate
Isomerase
pdb|1R2S|B Chain B, Crystal Structure Of Rabbit Muscle Triosephosphate
Isomerase
pdb|1R2S|C Chain C, Crystal Structure Of Rabbit Muscle Triosephosphate
Isomerase
pdb|1R2S|D Chain D, Crystal Structure Of Rabbit Muscle Triosephosphate
Isomerase
pdb|1R2T|A Chain A, Crystal Structure Of Rabbit Muscle Triosephosphate
Isomerase
pdb|1R2T|B Chain B, Crystal Structure Of Rabbit Muscle Triosephosphate
Isomerase
Length = 248
Score = 227 bits (579), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 112/190 (58%), Positives = 133/190 (70%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQ 113
KFFVGGNWK NG K+++ +L++ LN AK+ YID + L +I +AAQ
Sbjct: 5 KFFVGGNWKMNGRKKNLGELITTLNAAKVPADTEVVCAPPTAYIDFARQKLDPKIAVAAQ 64
Query: 114 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 173
N + GAFTGEIS +KD G WVVLGHSERRHV GE D+ IG+K A+ALSEGLGVI
Sbjct: 65 NCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALSEGLGVI 124
Query: 174 ACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEV 233
ACIGE+L EREAG T V F+Q K AD + W VV+AYEPVWAIGTGK ATP+QAQEV
Sbjct: 125 ACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEV 184
Query: 234 HAALRDWLKN 243
H LR WLK+
Sbjct: 185 HEKLRGWLKS 194
>pdb|1WYI|A Chain A, Human Triosephosphate Isomerase Of New Crystal Form
pdb|1WYI|B Chain B, Human Triosephosphate Isomerase Of New Crystal Form
pdb|2JK2|A Chain A, Structural Basis Of Human Triosephosphate Isomerase
Deficiency. Crystal Structure Of The Wild Type Enzyme.
pdb|2JK2|B Chain B, Structural Basis Of Human Triosephosphate Isomerase
Deficiency. Crystal Structure Of The Wild Type Enzyme
Length = 250
Score = 227 bits (579), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 112/190 (58%), Positives = 132/190 (69%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQ 113
KFFVGGNWK NG K+S+ +L+ LN AK+ YID + L +I +AAQ
Sbjct: 7 KFFVGGNWKMNGRKQSLGELIGTLNAAKVPADTEVVCAPPTAYIDFARQKLDPKIAVAAQ 66
Query: 114 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 173
N + GAFTGEIS +KD G WVVLGHSERRHV GE D+ IG+K A+AL+EGLGVI
Sbjct: 67 NCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVI 126
Query: 174 ACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEV 233
ACIGE+L EREAG T V F+Q K AD + W VV+AYEPVWAIGTGK ATP+QAQEV
Sbjct: 127 ACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEV 186
Query: 234 HAALRDWLKN 243
H LR WLK+
Sbjct: 187 HEKLRGWLKS 196
>pdb|1HTI|A Chain A, Crystal Structure Of Recombinant Human Triosephosphate
Isomerase At 2.8 Angstroms Resolution. Triosephosphate
Isomerase Related Human Genetic Disorders And Comparison
With The Trypanosomal Enzyme
pdb|1HTI|B Chain B, Crystal Structure Of Recombinant Human Triosephosphate
Isomerase At 2.8 Angstroms Resolution. Triosephosphate
Isomerase Related Human Genetic Disorders And Comparison
With The Trypanosomal Enzyme
Length = 248
Score = 227 bits (579), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 112/190 (58%), Positives = 132/190 (69%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQ 113
KFFVGGNWK NG K+S+ +L+ LN AK+ YID + L +I +AAQ
Sbjct: 5 KFFVGGNWKMNGRKQSLGELIGTLNAAKVPADTEVVCAPPTAYIDFARQKLDPKIAVAAQ 64
Query: 114 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 173
N + GAFTGEIS +KD G WVVLGHSERRHV GE D+ IG+K A+AL+EGLGVI
Sbjct: 65 NCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVI 124
Query: 174 ACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEV 233
ACIGE+L EREAG T V F+Q K AD + W VV+AYEPVWAIGTGK ATP+QAQEV
Sbjct: 125 ACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEV 184
Query: 234 HAALRDWLKN 243
H LR WLK+
Sbjct: 185 HEKLRGWLKS 194
>pdb|1TPU|A Chain A, S96p Change Is A Second-Site Suppressor For H95n Sluggish
Mutant Triosephosphate Isomerase
pdb|1TPU|B Chain B, S96p Change Is A Second-Site Suppressor For H95n Sluggish
Mutant Triosephosphate Isomerase
Length = 247
Score = 227 bits (578), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 112/190 (58%), Positives = 134/190 (70%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQ 113
KFFVGGNWK NG K+S+ +L+ LN AKL +Y+D + L +I +AAQ
Sbjct: 4 KFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSIYLDFARQKLDAKIGVAAQ 63
Query: 114 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 173
N + GAFTGEIS +KDIG WV+LG+SERRHV GE D+ IG+K A+AL+EGLGVI
Sbjct: 64 NCYKVPKGAFTGEISPAMIKDIGAAWVILGNSERRHVFGESDELIGQKVAHALAEGLGVI 123
Query: 174 ACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEV 233
ACIGE+L EREAG T V F+Q KA AD + W VV+AYEPVWAIGTGK ATP+QAQEV
Sbjct: 124 ACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEV 183
Query: 234 HAALRDWLKN 243
H LR WLK
Sbjct: 184 HEKLRGWLKT 193
>pdb|1TPC|1 Chain 1, Offset Of A Catalytic Lesion By A Bound Water Soluble
pdb|1TPC|2 Chain 2, Offset Of A Catalytic Lesion By A Bound Water Soluble
Length = 247
Score = 227 bits (578), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 111/190 (58%), Positives = 133/190 (70%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQ 113
KFFVGGNWK NG K+S+ +L+ LN AKL +Y+D + L +I +AAQ
Sbjct: 4 KFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSIYLDFARQKLDAKIGVAAQ 63
Query: 114 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 173
N + GAFTGEIS +KDIG WV+LGH ERRHV GE D+ IG+K A+AL+EGLGVI
Sbjct: 64 NCYKVPKGAFTGEISPAMIKDIGAAWVILGHPERRHVFGESDELIGQKVAHALAEGLGVI 123
Query: 174 ACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEV 233
ACIGE+L EREAG T V F+Q KA AD + W VV+AY+PVWAIGTGK ATP+QAQEV
Sbjct: 124 ACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYDPVWAIGTGKTATPQQAQEV 183
Query: 234 HAALRDWLKN 243
H LR WLK
Sbjct: 184 HEKLRGWLKT 193
>pdb|1SW7|A Chain A, Triosephosphate Isomerase From Gallus Gallus, Loop 6
Mutant K174n, T175s, A176s
pdb|1SW7|B Chain B, Triosephosphate Isomerase From Gallus Gallus, Loop 6
Mutant K174n, T175s, A176s
Length = 248
Score = 226 bits (577), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 111/190 (58%), Positives = 134/190 (70%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQ 113
KFFVGGNWK NG K+S+ +L+ LN AKL +Y+D + L +I +AAQ
Sbjct: 5 KFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSIYLDFARQKLDAKIGVAAQ 64
Query: 114 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 173
N + GAFTGEIS +KDIG WV+LGHSERRHV GE D+ IG+K A+AL+EGLGVI
Sbjct: 65 NCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHALAEGLGVI 124
Query: 174 ACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEV 233
ACIGE+L EREAG T V F+Q KA AD + W VV+AYEPVWAIGTG +TP+QAQEV
Sbjct: 125 ACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGNSSTPQQAQEV 184
Query: 234 HAALRDWLKN 243
H LR WLK+
Sbjct: 185 HEKLRGWLKS 194
>pdb|2VOM|A Chain A, Structural Basis Of Human Triosephosphate Isomerase
Deficiency. Mutation E104d And Correlation To Solvent
Perturbation.
pdb|2VOM|B Chain B, Structural Basis Of Human Triosephosphate Isomerase
Deficiency. Mutation E104d And Correlation To Solvent
Perturbation.
pdb|2VOM|C Chain C, Structural Basis Of Human Triosephosphate Isomerase
Deficiency. Mutation E104d And Correlation To Solvent
Perturbation.
pdb|2VOM|D Chain D, Structural Basis Of Human Triosephosphate Isomerase
Deficiency. Mutation E104d And Correlation To Solvent
Perturbation
Length = 250
Score = 226 bits (575), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 111/190 (58%), Positives = 132/190 (69%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQ 113
KFFVGGNWK NG K+S+ +L+ LN AK+ YID + L +I +AAQ
Sbjct: 7 KFFVGGNWKMNGRKQSLGELIGTLNAAKVPADTEVVCAPPTAYIDFARQKLDPKIAVAAQ 66
Query: 114 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 173
N + GAFTGEIS +KD G WVVLGHSERRHV G+ D+ IG+K A+AL+EGLGVI
Sbjct: 67 NCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGDSDELIGQKVAHALAEGLGVI 126
Query: 174 ACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEV 233
ACIGE+L EREAG T V F+Q K AD + W VV+AYEPVWAIGTGK ATP+QAQEV
Sbjct: 127 ACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEV 186
Query: 234 HAALRDWLKN 243
H LR WLK+
Sbjct: 187 HEKLRGWLKS 196
>pdb|1SW0|A Chain A, Triosephosphate Isomerase From Gallus Gallus, Loop 6 Hinge
Mutant K174l, T175w
pdb|1SW0|B Chain B, Triosephosphate Isomerase From Gallus Gallus, Loop 6 Hinge
Mutant K174l, T175w
Length = 248
Score = 225 bits (574), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 112/191 (58%), Positives = 134/191 (70%)
Query: 53 NKFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAA 112
KFFVGGNWK NG K+S+ +L+ LN AKL +Y+D + L +I +AA
Sbjct: 4 RKFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSIYLDFARQKLDAKIGVAA 63
Query: 113 QNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGV 172
QN + GAFTGEIS +KDIG WV+LGHSERRHV GE D+ IG+K A+AL+EGLGV
Sbjct: 64 QNCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHALAEGLGV 123
Query: 173 IACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQE 232
IACIGE+L EREAG T V F+Q KA AD + W VV+AYEPVWAIGTG ATP+QAQE
Sbjct: 124 IACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGLWATPQQAQE 183
Query: 233 VHAALRDWLKN 243
VH LR WLK+
Sbjct: 184 VHEKLRGWLKS 194
>pdb|1SQ7|A Chain A, Understanding Protein Lids: Structural Analysis Of Active
Hinge Mutants In Triosephosphate Isomerase
pdb|1SQ7|B Chain B, Understanding Protein Lids: Structural Analysis Of Active
Hinge Mutants In Triosephosphate Isomerase
Length = 247
Score = 225 bits (574), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 112/191 (58%), Positives = 134/191 (70%)
Query: 53 NKFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAA 112
KFFVGGNWK NG K+S+ +L+ LN AKL +Y+D + L +I +AA
Sbjct: 3 RKFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSIYLDFARQKLDAKIGVAA 62
Query: 113 QNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGV 172
QN + GAFTGEIS +KDIG WV+LGHSERRHV GE D+ IG+K A+AL+EGLGV
Sbjct: 63 QNCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHALAEGLGV 122
Query: 173 IACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQE 232
IACIGE+L EREAG T V F+Q KA AD + W VV+AYEPVWAIGTG ATP+QAQE
Sbjct: 123 IACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGLWATPQQAQE 182
Query: 233 VHAALRDWLKN 243
VH LR WLK+
Sbjct: 183 VHEKLRGWLKS 193
>pdb|1TPV|A Chain A, S96p Change Is A Second-Site Suppressor For H95n Sluggish
Mutant Triosephosphate Isomerase
pdb|1TPV|B Chain B, S96p Change Is A Second-Site Suppressor For H95n Sluggish
Mutant Triosephosphate Isomerase
Length = 247
Score = 225 bits (574), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 111/190 (58%), Positives = 133/190 (70%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQ 113
KFFVGGNWK NG K+S+ +L+ LN AKL +Y+D + L +I +AAQ
Sbjct: 4 KFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSIYLDFARQKLDAKIGVAAQ 63
Query: 114 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 173
N + GAFTGEIS +KDIG WV+LG+ ERRHV GE D+ IG+K A+AL+EGLGVI
Sbjct: 64 NCYKVPKGAFTGEISPAMIKDIGAAWVILGNPERRHVFGESDELIGQKVAHALAEGLGVI 123
Query: 174 ACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEV 233
ACIGE+L EREAG T V F+Q KA AD + W VV+AYEPVWAIGTGK ATP+QAQEV
Sbjct: 124 ACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEV 183
Query: 234 HAALRDWLKN 243
H LR WLK
Sbjct: 184 HEKLRGWLKT 193
>pdb|1SU5|A Chain A, Understanding Protein Lids: Structural Analysis Of Active
Hinge Mutants In Triosephosphate Isomerase
pdb|1SU5|B Chain B, Understanding Protein Lids: Structural Analysis Of Active
Hinge Mutants In Triosephosphate Isomerase
Length = 247
Score = 225 bits (574), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 111/190 (58%), Positives = 133/190 (70%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQ 113
KFFVGGNWK NG K+S+ +L+ LN AKL +Y+D + L +I +AAQ
Sbjct: 4 KFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSIYLDFARQKLDAKIGVAAQ 63
Query: 114 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 173
N + GAFTGEIS +KDIG WV+LGHSERRHV GE D+ IG+K A+AL+EGLGVI
Sbjct: 64 NCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHALAEGLGVI 123
Query: 174 ACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEV 233
ACIGE+L EREAG T V F+Q KA AD + W VV+AYEPVWAIGTG TP+QAQEV
Sbjct: 124 ACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGNPNTPQQAQEV 183
Query: 234 HAALRDWLKN 243
H LR WLK+
Sbjct: 184 HEKLRGWLKS 193
>pdb|1SSD|A Chain A, Understanding Protein Lids: Structural Analysis Of Active
Hinge Mutants In Triosephosphate Isomerase
pdb|1SSD|B Chain B, Understanding Protein Lids: Structural Analysis Of Active
Hinge Mutants In Triosephosphate Isomerase
pdb|1SSG|A Chain A, Understanding Protein Lids: Structural Analysis Of Active
Hinge Mutants In Triosephosphate Isomerase
pdb|1SSG|B Chain B, Understanding Protein Lids: Structural Analysis Of Active
Hinge Mutants In Triosephosphate Isomerase
Length = 247
Score = 224 bits (572), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 111/190 (58%), Positives = 133/190 (70%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQ 113
KFFVGGNWK NG K+S+ +L+ LN AKL +Y+D + L +I +AAQ
Sbjct: 4 KFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSIYLDFARQKLDAKIGVAAQ 63
Query: 114 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 173
N + GAFTGEIS +KDIG WV+LGHSERRHV GE D+ IG+K A+AL+EGLGVI
Sbjct: 64 NCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHALAEGLGVI 123
Query: 174 ACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEV 233
ACIGE+L EREAG T V F+Q KA AD + W VV+AYEPVWAIGTG TP+QAQEV
Sbjct: 124 ACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGYSLTPQQAQEV 183
Query: 234 HAALRDWLKN 243
H LR WLK+
Sbjct: 184 HEKLRGWLKS 193
>pdb|2I9E|A Chain A, Structure Of Triosephosphate Isomerase Of Tenebrio Molitor
pdb|2I9E|B Chain B, Structure Of Triosephosphate Isomerase Of Tenebrio Molitor
pdb|2I9E|C Chain C, Structure Of Triosephosphate Isomerase Of Tenebrio Molitor
pdb|2I9E|D Chain D, Structure Of Triosephosphate Isomerase Of Tenebrio Molitor
Length = 259
Score = 206 bits (525), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 100/188 (53%), Positives = 125/188 (66%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQ 113
KF VGGNWK NG K+ I +++ L L +Y++ V+ + I +AAQ
Sbjct: 4 KFVVGGNWKMNGDKKQINEIIGFLKSGPLNQDTEVVVGVPAIYLELVRTCVPASIGVAAQ 63
Query: 114 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 173
N + GAFTGEIS +KD+G WV+LGHSERR + GE D+ I +K +AL GL VI
Sbjct: 64 NCYKVPKGAFTGEISPAMIKDVGADWVILGHSERRQIFGESDELIAEKVCHALESGLKVI 123
Query: 174 ACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEV 233
ACIGE L+EREAGKT +V F+Q KA A + W NVVIAYEPVWAIGTGK ATP+QAQ+V
Sbjct: 124 ACIGETLEEREAGKTEEVVFRQTKAIAAKVNDWSNVVIAYEPVWAIGTGKTATPQQAQDV 183
Query: 234 HAALRDWL 241
H ALR W+
Sbjct: 184 HKALRQWI 191
>pdb|3TH6|A Chain A, Crystal Structure Of Triosephosphate Isomerase From
Rhipicephalus (Boophilus) Microplus.
pdb|3TH6|B Chain B, Crystal Structure Of Triosephosphate Isomerase From
Rhipicephalus (Boophilus) Microplus
Length = 249
Score = 206 bits (524), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 100/188 (53%), Positives = 129/188 (68%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQ 113
+F VGGNWK +G+K SI + + L A L+ Y+D ++ L + +AAQ
Sbjct: 5 RFCVGGNWKMHGSKNSIRDICNTLKGASLDPNVEVIVACPAPYLDYCRSLLPPSVALAAQ 64
Query: 114 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 173
N + + GAFTGEIS +KD G +WV+LGHSERRHV EDD IG+K +AL GL VI
Sbjct: 65 NCYKVEQGAFTGEISPGMIKDCGGQWVILGHSERRHVFKEDDVLIGEKIKHALESGLNVI 124
Query: 174 ACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEV 233
ACIGE L++REAG+T +VCF+Q+K A + W VVIAYEPVWAIGTGK ATP+QAQEV
Sbjct: 125 ACIGELLEDREAGRTEEVCFRQIKHIASNVKDWSKVVIAYEPVWAIGTGKTATPDQAQEV 184
Query: 234 HAALRDWL 241
H+ +R+WL
Sbjct: 185 HSKVRNWL 192
>pdb|1YPI|A Chain A, Structure Of Yeast Triosephosphate Isomerase At 1.9-
Angstroms Resolution
pdb|1YPI|B Chain B, Structure Of Yeast Triosephosphate Isomerase At 1.9-
Angstroms Resolution
pdb|2YPI|A Chain A, Crystallographic Analysis Of The Complex Between
Triosephosphate Isomerase And 2-Phosphoglycolate At 2.5-
Angstroms Resolution. Implications For Catalysis
pdb|2YPI|B Chain B, Crystallographic Analysis Of The Complex Between
Triosephosphate Isomerase And 2-Phosphoglycolate At 2.5-
Angstroms Resolution. Implications For Catalysis
pdb|7TIM|A Chain A, Structure Of The Triosephosphate Isomerase-
Phosphoglycolohydroxamate Complex: An Analogue Of The
Intermediate On The Reaction Pathway
pdb|7TIM|B Chain B, Structure Of The Triosephosphate Isomerase-
Phosphoglycolohydroxamate Complex: An Analogue Of The
Intermediate On The Reaction Pathway
Length = 247
Score = 200 bits (508), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 96/188 (51%), Positives = 129/188 (68%), Gaps = 1/188 (0%)
Query: 55 FFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYID-QVKNSLTDRIEIAAQ 113
FFVGGN+K NG+K+SI ++V LN A + Y+D V ++ + AQ
Sbjct: 4 FFVGGNFKLNGSKQSIKEIVERLNTASIPENVEVVICPPATYLDYSVSLVKKPQVTVGAQ 63
Query: 114 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 173
N+++ GAFTGE SV+Q+KD+G KWV+LGHSERR EDD+FI K +AL +G+GVI
Sbjct: 64 NAYLKASGAFTGENSVDQIKDVGAKWVILGHSERRSYFHEDDKFIADKTKFALGQGVGVI 123
Query: 174 ACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEV 233
CIGE L+E++AGKT DV +QL A + + W NVV+AYEPVWAIGTG ATPE AQ++
Sbjct: 124 LCIGETLEEKKAGKTLDVVERQLNAVLEEVKDWTNVVVAYEPVWAIGTGLAATPEDAQDI 183
Query: 234 HAALRDWL 241
HA++R +L
Sbjct: 184 HASIRKFL 191
>pdb|4FF7|A Chain A, Structure Of C126s Mutant Of Saccharomyces Cerevisiae
Triosephosphate Isomerase
pdb|4FF7|B Chain B, Structure Of C126s Mutant Of Saccharomyces Cerevisiae
Triosephosphate Isomerase
Length = 248
Score = 197 bits (500), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 95/188 (50%), Positives = 128/188 (68%), Gaps = 1/188 (0%)
Query: 55 FFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYID-QVKNSLTDRIEIAAQ 113
FFVGGN+K NG+K+SI ++V LN A + Y+D V ++ + AQ
Sbjct: 5 FFVGGNFKLNGSKQSIKEIVERLNTASIPENVEVVICPPATYLDYSVSLVKKPQVTVGAQ 64
Query: 114 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 173
N+++ GAFTGE SV+Q+KD+G KWV+LGHSERR EDD+FI K +AL +G+GVI
Sbjct: 65 NAYLKASGAFTGENSVDQIKDVGAKWVILGHSERRSYFHEDDKFIADKTKFALGQGVGVI 124
Query: 174 ACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEV 233
IGE L+E++AGKT DV +QL A + + W NVV+AYEPVWAIGTG ATPE AQ++
Sbjct: 125 LSIGETLEEKKAGKTLDVVERQLNAVLEEVKDWTNVVVAYEPVWAIGTGLAATPEDAQDI 184
Query: 234 HAALRDWL 241
HA++R +L
Sbjct: 185 HASIRKFL 192
>pdb|3YPI|A Chain A, Electrophilic Catalysis In Triosephosphase Isomerase: The
Role Of Histidine-95
pdb|3YPI|B Chain B, Electrophilic Catalysis In Triosephosphase Isomerase: The
Role Of Histidine-95
Length = 247
Score = 197 bits (500), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 95/188 (50%), Positives = 128/188 (68%), Gaps = 1/188 (0%)
Query: 55 FFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYID-QVKNSLTDRIEIAAQ 113
FFVGGN+K NG+K+SI ++V LN A + Y+D V ++ + AQ
Sbjct: 4 FFVGGNFKLNGSKQSIKEIVERLNTASIPENVEVVICPPATYLDYSVSLVKKPQVTVGAQ 63
Query: 114 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 173
N+++ GAFTGE SV+Q+KD+G KWV+LG SERR EDD+FI K +AL +G+GVI
Sbjct: 64 NAYLKASGAFTGENSVDQIKDVGAKWVILGQSERRSYFHEDDKFIADKTKFALGQGVGVI 123
Query: 174 ACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEV 233
CIGE L+E++AGKT DV +QL A + + W NVV+AYEPVWAIGTG ATPE AQ++
Sbjct: 124 LCIGETLEEKKAGKTLDVVERQLNAVLEEVKDWTNVVVAYEPVWAIGTGLAATPEDAQDI 183
Query: 234 HAALRDWL 241
HA++R +L
Sbjct: 184 HASIRKFL 191
>pdb|1MO0|A Chain A, Structural Genomics Of Caenorhabditis Elegans: Triose
Phosphate Isomerase
pdb|1MO0|B Chain B, Structural Genomics Of Caenorhabditis Elegans: Triose
Phosphate Isomerase
Length = 275
Score = 194 bits (494), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 99/189 (52%), Positives = 125/189 (66%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQ 113
KFFVGGNWK NG S+ +V+ LN + Y+ K+ L + +AAQ
Sbjct: 24 KFFVGGNWKMNGDYASVDGIVTFLNASADNSSVDVVVAPPAPYLAYAKSKLKAGVLVAAQ 83
Query: 114 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 173
N + GAFTGEIS +KD+G +WV+LGHSERRHV GE D I +K +AL G+ V+
Sbjct: 84 NCYKVPKGAFTGEISPAMIKDLGLEWVILGHSERRHVFGESDALIAEKTVHALEAGIKVV 143
Query: 174 ACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEV 233
CIGE+L+EREAG T DV F+QL+A D SW+N+VIAYEPVWAIGTGK A+ EQAQEV
Sbjct: 144 FCIGEKLEEREAGHTKDVNFRQLQAIVDKGVSWENIVIAYEPVWAIGTGKTASGEQAQEV 203
Query: 234 HAALRDWLK 242
H +R +LK
Sbjct: 204 HEWIRAFLK 212
>pdb|1I45|A Chain A, Yeast Triosephosphate Isomerase (Mutant)
pdb|1I45|B Chain B, Yeast Triosephosphate Isomerase (Mutant)
Length = 248
Score = 192 bits (489), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 93/188 (49%), Positives = 128/188 (68%), Gaps = 1/188 (0%)
Query: 55 FFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYID-QVKNSLTDRIEIAAQ 113
FFVGGN+K NG+K+SI ++V LN A + Y+D V ++ + AQ
Sbjct: 5 FFVGGNFKLNGSKQSIKEIVERLNTASIPENVEVVICPPATYLDYSVSLVKKPQVTVGAQ 64
Query: 114 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 173
N+++ GAFTGE SV+Q+KD+G K+V+LGHSERR EDD+FI K +AL +G+GVI
Sbjct: 65 NAYLKASGAFTGENSVDQIKDVGAKYVILGHSERRSYFHEDDKFIADKTKFALGQGVGVI 124
Query: 174 ACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEV 233
CIGE L+E++AGKT DV +QL A + + + NVV+AYEPV AIGTG ATPE AQ++
Sbjct: 125 LCIGETLEEKKAGKTLDVVERQLNAVLEEVKDFTNVVVAYEPVXAIGTGLAATPEDAQDI 184
Query: 234 HAALRDWL 241
HA++R +L
Sbjct: 185 HASIRKFL 192
>pdb|1NF0|A Chain A, Triosephosphate Isomerase In Complex With Dhap
pdb|1NF0|B Chain B, Triosephosphate Isomerase In Complex With Dhap
pdb|1NEY|A Chain A, Triosephosphate Isomerase In Complex With Dhap
pdb|1NEY|B Chain B, Triosephosphate Isomerase In Complex With Dhap
Length = 247
Score = 192 bits (489), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 93/188 (49%), Positives = 128/188 (68%), Gaps = 1/188 (0%)
Query: 55 FFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYID-QVKNSLTDRIEIAAQ 113
FFVGGN+K NG+K+SI ++V LN A + Y+D V ++ + AQ
Sbjct: 4 FFVGGNFKLNGSKQSIKEIVERLNTASIPENVEVVICPPATYLDYSVSLVKKPQVTVGAQ 63
Query: 114 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 173
N+++ GAFTGE SV+Q+KD+G K+V+LGHSERR EDD+FI K +AL +G+GVI
Sbjct: 64 NAYLKASGAFTGENSVDQIKDVGAKYVILGHSERRSYFHEDDKFIADKTKFALGQGVGVI 123
Query: 174 ACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEV 233
CIGE L+E++AGKT DV +QL A + + + NVV+AYEPV AIGTG ATPE AQ++
Sbjct: 124 LCIGETLEEKKAGKTLDVVERQLNAVLEEVKDFTNVVVAYEPVXAIGTGLAATPEDAQDI 183
Query: 234 HAALRDWL 241
HA++R +L
Sbjct: 184 HASIRKFL 191
>pdb|1QDS|A Chain A, Superstable E65q Mutant Of Leishmania Mexicana
Triosephosphate Isomerase (Tim)
pdb|1IF2|A Chain A, X-Ray Structure Of Leishmania Mexicana Triosephosphate
Isomerase Complexed With Ipp
pdb|1N55|A Chain A, 0.83a Resolution Structure Of The E65q Mutant Of
Leishmania Mexicana Triosephosphate Isomerase Complexed
With 2-Phosphoglycolate
pdb|2VXN|A Chain A, E65q-Tim Complexed With Phosphoglycolohydroxamate At 0.82
A Resolution
pdb|2Y61|A Chain A, Crystal Structure Of Leishmanial E65q-Tim Complexed With
S-Glycidol Phosphate
pdb|2Y62|A Chain A, Crystal Structure Of Leishmanial E65q-Tim Complexed With
R-Glycidol Phosphate
pdb|2Y63|A Chain A, Crystal Structure Of Leishmanial E65q-Tim Complexed With
Bromohydroxyacetone Phosphate
Length = 251
Score = 184 bits (466), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 96/189 (50%), Positives = 120/189 (63%), Gaps = 4/189 (2%)
Query: 56 FVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTD-RIEIAAQN 114
NWKCNGT SI KLV N+ + FV+I V+ L + + I+AQN
Sbjct: 8 IAAANWKCNGTTASIEKLVQVFNEHTISHDVQCVVAPTFVHIPLVQAKLRNPKYVISAQN 67
Query: 115 SWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIA 174
+ + K GAFTGE+S+ LKDIG WV+LGHSERR GE D+ + +K + A +G VIA
Sbjct: 68 A-IAKSGAFTGEVSMPILKDIGVHWVILGHSERRTYYGETDEIVAQKVSEACKQGFMVIA 126
Query: 175 CIGEQLQEREAGKTFDVCFQQLKAYADAIP--SWDNVVIAYEPVWAIGTGKVATPEQAQE 232
CIGE LQ+REA +T V Q A A + +W+ VV+AYEPVWAIGTGKVATPEQAQE
Sbjct: 127 CIGETLQQREANQTAKVVLSQTSAIAAKLTKDAWNQVVLAYEPVWAIGTGKVATPEQAQE 186
Query: 233 VHAALRDWL 241
VH LR W+
Sbjct: 187 VHLLLRKWV 195
>pdb|2OMA|A Chain A, Crystallographic Analysis Of A Chemically Modified
Triosephosphate Isomerase From Trypanosoma Cruzi With
Dithiobenzylamine (dtba)
pdb|2OMA|B Chain B, Crystallographic Analysis Of A Chemically Modified
Triosephosphate Isomerase From Trypanosoma Cruzi With
Dithiobenzylamine (dtba)
Length = 250
Score = 183 bits (464), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 92/189 (48%), Positives = 122/189 (64%), Gaps = 4/189 (2%)
Query: 58 GGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTD-RIEIAAQNSW 116
NWKCNG++ + L+ LN A + F++I K LT+ + +IAAQN+
Sbjct: 9 AANWKCNGSESLLVPLIETLNAATFDHDVQCVVAPTFLHIPMTKARLTNPKFQIAAQNA- 67
Query: 117 VGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACI 176
+ + GAFTGE+S++ LKD G WVVLGHSERR GE ++ + +K A A + G VI C+
Sbjct: 68 ITRSGAFTGEVSLQILKDYGISWVVLGHSERRLYYGETNEIVAEKVAQAXAAGFHVIVCV 127
Query: 177 GEQLQEREAGKTFDVCFQQLKAYADAIP--SWDNVVIAYEPVWAIGTGKVATPEQAQEVH 234
GE +EREAG+T V QL A A + +W VVIAYEPVWAIGTGKVATP+QAQEVH
Sbjct: 128 GETNEEREAGRTAAVVLTQLAAVAQKLSKEAWSRVVIAYEPVWAIGTGKVATPQQAQEVH 187
Query: 235 AALRDWLKN 243
LR W+++
Sbjct: 188 ELLRRWVRS 196
>pdb|1CI1|A Chain A, Crystal Structure Of Triosephosphate Isomerase From
Trypanosoma Cruzi In Hexane
pdb|1CI1|B Chain B, Crystal Structure Of Triosephosphate Isomerase From
Trypanosoma Cruzi In Hexane
pdb|1SUX|A Chain A, Crystallographic Analysis Of The Complex Between
Triosephosphate Isomerase From Trypanosoma Cruzi And
3-(2- Benzothiazolylthio)-1-propanesulfonic Acid
pdb|1SUX|B Chain B, Crystallographic Analysis Of The Complex Between
Triosephosphate Isomerase From Trypanosoma Cruzi And
3-(2- Benzothiazolylthio)-1-propanesulfonic Acid
Length = 251
Score = 183 bits (464), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/189 (48%), Positives = 122/189 (64%), Gaps = 4/189 (2%)
Query: 58 GGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTD-RIEIAAQNSW 116
NWKCNG++ + L+ LN A + F++I K LT+ + +IAAQN+
Sbjct: 10 AANWKCNGSESLLVPLIETLNAATFDHDVQCVVAPTFLHIPMTKARLTNPKFQIAAQNA- 68
Query: 117 VGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACI 176
+ + GAFTGE+S++ LKD G WVVLGHSERR GE ++ + +K A A + G VI C+
Sbjct: 69 ITRSGAFTGEVSLQILKDYGISWVVLGHSERRLYYGETNEIVAEKVAQACAAGFHVIVCV 128
Query: 177 GEQLQEREAGKTFDVCFQQLKAYADAIP--SWDNVVIAYEPVWAIGTGKVATPEQAQEVH 234
GE +EREAG+T V QL A A + +W VVIAYEPVWAIGTGKVATP+QAQEVH
Sbjct: 129 GETNEEREAGRTAAVVLTQLAAVAQKLSKEAWSRVVIAYEPVWAIGTGKVATPQQAQEVH 188
Query: 235 AALRDWLKN 243
LR W+++
Sbjct: 189 ELLRRWVRS 197
>pdb|1TCD|A Chain A, Trypanosoma Cruzi Triosephosphate Isomerase
pdb|1TCD|B Chain B, Trypanosoma Cruzi Triosephosphate Isomerase
Length = 249
Score = 182 bits (463), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/189 (48%), Positives = 122/189 (64%), Gaps = 4/189 (2%)
Query: 58 GGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTD-RIEIAAQNSW 116
NWKCNG++ + L+ LN A + F++I K LT+ + +IAAQN+
Sbjct: 8 AANWKCNGSESLLVPLIETLNAATFDHDVQCVVAPTFLHIPMTKARLTNPKFQIAAQNA- 66
Query: 117 VGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACI 176
+ + GAFTGE+S++ LKD G WVVLGHSERR GE ++ + +K A A + G VI C+
Sbjct: 67 ITRSGAFTGEVSLQILKDYGISWVVLGHSERRLYYGETNEIVAEKVAQACAAGFHVIVCV 126
Query: 177 GEQLQEREAGKTFDVCFQQLKAYADAIP--SWDNVVIAYEPVWAIGTGKVATPEQAQEVH 234
GE +EREAG+T V QL A A + +W VVIAYEPVWAIGTGKVATP+QAQEVH
Sbjct: 127 GETNEEREAGRTAAVVLTQLAAVAQKLSKEAWSRVVIAYEPVWAIGTGKVATPQQAQEVH 186
Query: 235 AALRDWLKN 243
LR W+++
Sbjct: 187 ELLRRWVRS 195
>pdb|1AMK|A Chain A, Leishmania Mexicana Triose Phosphate Isomerase
Length = 251
Score = 182 bits (463), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/189 (50%), Positives = 120/189 (63%), Gaps = 4/189 (2%)
Query: 56 FVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTD-RIEIAAQN 114
NWKCNGT SI KLV N+ + FV+I V+ L + + I+A+N
Sbjct: 8 IAAANWKCNGTTASIEKLVQVFNEHTISHDVQCVVAPTFVHIPLVQAKLRNPKYVISAEN 67
Query: 115 SWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIA 174
+ + K GAFTGE+S+ LKDIG WV+LGHSERR GE D+ + +K + A +G VIA
Sbjct: 68 A-IAKSGAFTGEVSMPILKDIGVHWVILGHSERRTYYGETDEIVAQKVSEACKQGFMVIA 126
Query: 175 CIGEQLQEREAGKTFDVCFQQLKAYADAIP--SWDNVVIAYEPVWAIGTGKVATPEQAQE 232
CIGE LQ+REA +T V Q A A + +W+ VV+AYEPVWAIGTGKVATPEQAQE
Sbjct: 127 CIGETLQQREANQTAKVVLSQTSAIAAKLTKDAWNQVVLAYEPVWAIGTGKVATPEQAQE 186
Query: 233 VHAALRDWL 241
VH LR W+
Sbjct: 187 VHLLLRKWV 195
>pdb|3QSR|A Chain A, Crystal Structure Of Trichomonas Vaginalis Triosephosphate
Isomerase Tvag_497370 Gene (Ile-45 Variant)
Length = 255
Score = 176 bits (447), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 121/190 (63%), Gaps = 3/190 (1%)
Query: 55 FFVGGNWKCNG-TKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQ 113
FFVGGNWK N T E KL+ LN AK+E F+++ ++ L +++A+
Sbjct: 7 FFVGGNWKANPKTVEEAEKLIEMLNGAKVEGNVEVVVAAPFIFLPTLQQKLRKDWKVSAE 66
Query: 114 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 173
N + GAFTGE++V +K G +W +LGHSERR ++ EDD+F+ KA +AL G+ +I
Sbjct: 67 NVFTKPNGAFTGEVTVPMIKSFGIEWTILGHSERRDILKEDDEFLAAKAKFALENGMKII 126
Query: 174 ACIGEQLQEREAGKTFDVCFQQLKAYADAIPS--WDNVVIAYEPVWAIGTGKVATPEQAQ 231
C GE L EREAGK + Q++ AIP+ WD+VVIAYEP+WAIGTGKVA+ + AQ
Sbjct: 127 YCCGEHLSEREAGKASEFVSAQIEKMIPAIPAGKWDDVVIAYEPIWAIGTGKVASTQDAQ 186
Query: 232 EVHAALRDWL 241
E+ +RD L
Sbjct: 187 EMCKVIRDIL 196
>pdb|3QST|A Chain A, Crystal Structure Of Trichomonas Vaginalis Triosephosphate
Isomerase Tvag_096350 Gene (Val-45 Variant)
Length = 255
Score = 176 bits (445), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 121/190 (63%), Gaps = 3/190 (1%)
Query: 55 FFVGGNWKCNG-TKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQ 113
FFVGGNWK N T + KLV LN AK+E FV++ ++ L +++A+
Sbjct: 7 FFVGGNWKANPKTVQEAEKLVEMLNGAKVEGNVEVVVAAPFVFLPTLQQKLRKDWKVSAE 66
Query: 114 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 173
N + GAFTGE++V +K G +W +LGHSERR ++ EDD+F+ KA +AL G+ +I
Sbjct: 67 NVFTKPNGAFTGEVTVPMIKSFGIEWTILGHSERRDILKEDDEFLAAKAKFALENGMKII 126
Query: 174 ACIGEQLQEREAGKTFDVCFQQLKAYADAIPS--WDNVVIAYEPVWAIGTGKVATPEQAQ 231
C GE L EREAGK + Q++ AIP+ WD+VVIAYEP+WAIGTGKVA+ + AQ
Sbjct: 127 YCCGEHLSEREAGKASEFVSAQIEKMIPAIPAGKWDDVVIAYEPIWAIGTGKVASTQDAQ 186
Query: 232 EVHAALRDWL 241
E+ +RD L
Sbjct: 187 EMCKVIRDIL 196
>pdb|3Q37|A Chain A, Identification Of Amino Acids That Account For Long-Range
Interactions In Proteins Using Two Triosephosphate
Isomerases From Pathogenic Trypanosomes.
pdb|3Q37|B Chain B, Identification Of Amino Acids That Account For Long-Range
Interactions In Proteins Using Two Triosephosphate
Isomerases From Pathogenic Trypanosomes.
pdb|3Q37|C Chain C, Identification Of Amino Acids That Account For Long-Range
Interactions In Proteins Using Two Triosephosphate
Isomerases From Pathogenic Trypanosomes.
pdb|3Q37|D Chain D, Identification Of Amino Acids That Account For Long-Range
Interactions In Proteins Using Two Triosephosphate
Isomerases From Pathogenic Trypanosomes
Length = 251
Score = 175 bits (444), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/189 (48%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Query: 58 GGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTD-RIEIAAQNSW 116
NWKCNG+++S+++L+ N + F++I K LT+ + +IAAQN+
Sbjct: 10 AANWKCNGSQQSLSELIDLFNSTSINHDVQCVVAPTFLHIPMTKARLTNPKFQIAAQNA- 68
Query: 117 VGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACI 176
+ + GAFTGE+S++ LKD G WVVLGHSERR GE ++ + K A A++ G VI C+
Sbjct: 69 ITRSGAFTGEVSLQILKDYGISWVVLGHSERRAYYGETNEIVADKVAAAVASGFHVIVCV 128
Query: 177 GEQLQEREAGKTFDVCFQQLKAYADAIP--SWDNVVIAYEPVWAIGTGKVATPEQAQEVH 234
GE +EREAG+T V QL A A + +W VVIAYEPVWAIGTGKVATP+QAQEVH
Sbjct: 129 GETNEEREAGRTAAVVLTQLAAVAQKLSKEAWSRVVIAYEPVWAIGTGKVATPQQAQEVH 188
Query: 235 AALRDWLKN 243
LR W+++
Sbjct: 189 ELLRRWVRS 197
>pdb|1M6J|A Chain A, Crystal Structure Of Triosephosphate Isomerase From
Entamoeba Histolytica
pdb|1M6J|B Chain B, Crystal Structure Of Triosephosphate Isomerase From
Entamoeba Histolytica
Length = 261
Score = 170 bits (431), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 94/206 (45%), Positives = 130/206 (63%), Gaps = 12/206 (5%)
Query: 54 KFFVGGNWKCNGTK---ESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDR--- 107
KF VGGNWKCNGT E++TK V+ DA+L F+YI +V+ L
Sbjct: 5 KFVVGGNWKCNGTLASIETLTKGVAASVDAELAKKVEVIVGVPFIYIPKVQQILAGEANG 64
Query: 108 --IEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYA 165
I ++A+N+W K GA+TGE+ V L D +V+LGHSERR + E ++ + +K A
Sbjct: 65 ANILVSAENAWT-KSGAYTGEVHVGMLVDCQVPYVILGHSERRQIFHESNEQVAEKVKVA 123
Query: 166 LSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIP--SWDNVVIAYEPVWAIGTGK 223
+ GL VIACIGE +R A +T +V QLKA +AI +W N+++AYEPVWAIGTGK
Sbjct: 124 IDAGLKVIACIGETEAQRIANQTEEVVAAQLKAINNAISKEAWKNIILAYEPVWAIGTGK 183
Query: 224 VATPEQAQEVHAALRDWL-KNMSQQT 248
ATP+QAQEVH +R W+ +N+S++
Sbjct: 184 TATPDQAQEVHQYIRKWMTENISKEV 209
>pdb|4TIM|A Chain A, Crystallographic And Molecular Modeling Studies On
Trypanosomal Triosephosphate Isomerase: A Critical
Assessment Of The Predicted And Observed Structures Of
The Complex With 2-Phosphoglycerate
pdb|4TIM|B Chain B, Crystallographic And Molecular Modeling Studies On
Trypanosomal Triosephosphate Isomerase: A Critical
Assessment Of The Predicted And Observed Structures Of
The Complex With 2-Phosphoglycerate
pdb|5TIM|A Chain A, Refined 1.83 Angstroms Structure Of Trypanosomal
Triosephosphate Isomerase, Crystallized In The Presence
Of 2.4 M-Ammonium Sulphate. A Comparison With The
Structure Of The Trypanosomal Triosephosphate
Isomerase-Glycerol-3- Phosphate Complex
pdb|5TIM|B Chain B, Refined 1.83 Angstroms Structure Of Trypanosomal
Triosephosphate Isomerase, Crystallized In The Presence
Of 2.4 M-Ammonium Sulphate. A Comparison With The
Structure Of The Trypanosomal Triosephosphate
Isomerase-Glycerol-3- Phosphate Complex
pdb|6TIM|A Chain A, The Adaptability Of The Active Site Of Trypanosomal
Triosephosphate Isomerase As Observed In The Crystal
Structures Of Three Different Complexes
pdb|6TIM|B Chain B, The Adaptability Of The Active Site Of Trypanosomal
Triosephosphate Isomerase As Observed In The Crystal
Structures Of Three Different Complexes
pdb|1TRD|A Chain A, The Influence Of Crystal Packing On Crystallographic
Binding Studies: A New Crystal Form Of Trypanosomal Tim
pdb|1TRD|B Chain B, The Influence Of Crystal Packing On Crystallographic
Binding Studies: A New Crystal Form Of Trypanosomal Tim
pdb|1TPD|A Chain A, Structures Of The "open" And "closed" State Of
Trypanosomal Triosephosphate Isomerase, As Observed In A
New Crystal Form: Implications For The Reaction
Mechanism
pdb|1TPD|B Chain B, Structures Of The "open" And "closed" State Of
Trypanosomal Triosephosphate Isomerase, As Observed In A
New Crystal Form: Implications For The Reaction
Mechanism
pdb|1TPF|A Chain A, Comparison Of The Structures And The Crystal Contacts Of
Trypanosomal Triosephosphate Isomerase In Four Different
Crystal Forms
pdb|1TPF|B Chain B, Comparison Of The Structures And The Crystal Contacts Of
Trypanosomal Triosephosphate Isomerase In Four Different
Crystal Forms
pdb|1AG1|O Chain O, Monohydrogen Phosphate Binding To Trypanosomal
Triosephosphate Isomerase
pdb|1AG1|T Chain T, Monohydrogen Phosphate Binding To Trypanosomal
Triosephosphate Isomerase
pdb|1IIG|A Chain A, Structure Of Trypanosoma Brucei Brucei Triosephosphate
Isomerase Complexed With 3-Phosphonopropionate
pdb|1IIG|B Chain B, Structure Of Trypanosoma Brucei Brucei Triosephosphate
Isomerase Complexed With 3-Phosphonopropionate
pdb|1IIH|A Chain A, Structure Of Trypanosoma Brucei Brucei Triosephosphate
Isomerase Complexed With 3-Phosphoglycerate
pdb|1IIH|B Chain B, Structure Of Trypanosoma Brucei Brucei Triosephosphate
Isomerase Complexed With 3-Phosphoglycerate
pdb|2V5L|A Chain A, Structures Of The Open And Closed State Of Trypanosomal
Triosephosphate Isomerase: As Observed In A New Crystal
Form: Implications For The Reaction Mechanism
pdb|2V5L|B Chain B, Structures Of The Open And Closed State Of Trypanosomal
Triosephosphate Isomerase: As Observed In A New Crystal
Form: Implications For The Reaction Mechanism
Length = 250
Score = 167 bits (422), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 91/187 (48%), Positives = 121/187 (64%), Gaps = 4/187 (2%)
Query: 60 NWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLT-DRIEIAAQNSWVG 118
NWKCNG+++S+++L+ N + FV++ K L+ + IAAQN+ +
Sbjct: 11 NWKCNGSQQSLSELIDLFNSTSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNA-IA 69
Query: 119 KGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 178
K GAFTGE+S+ LKD G W+VLGHSERR GE ++ + K A A++ G VIACIGE
Sbjct: 70 KSGAFTGEVSLPILKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACIGE 129
Query: 179 QLQEREAGKTFDVCFQQLKAYADAIPS--WDNVVIAYEPVWAIGTGKVATPEQAQEVHAA 236
LQERE+G+T V Q+ A A + W VVIAYEPVWAIGTGKVATP+QAQE HA
Sbjct: 130 TLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQEAHAL 189
Query: 237 LRDWLKN 243
+R W+ +
Sbjct: 190 IRSWVSS 196
>pdb|3TIM|A Chain A, The Crystal Structure Of The "open" And The "closed"
Conformation Of The Flexible Loop Of Trypanosomal
Triosephosphate Isomerase
pdb|3TIM|B Chain B, The Crystal Structure Of The "open" And The "closed"
Conformation Of The Flexible Loop Of Trypanosomal
Triosephosphate Isomerase
pdb|1TSI|A Chain A, Structure Of The Complex Between Trypanosomal
Triosephosphate Isomerase And N-Hydroxy-4-Phosphono-
Butanamide: Binding At The Active Site Despite An "open"
Flexible Loop
pdb|1TSI|B Chain B, Structure Of The Complex Between Trypanosomal
Triosephosphate Isomerase And N-Hydroxy-4-Phosphono-
Butanamide: Binding At The Active Site Despite An "open"
Flexible Loop
pdb|1TPE| Chain , Triosephosphate Isomerase (E.C.5.3.1.1)
pdb|1TPE|A Chain A, Comparison Of The Structures And The Crystal Contacts Of
Trypanosomal Triosephosphate Isomerase In Four Different
Crystal Forms
Length = 250
Score = 167 bits (422), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 91/187 (48%), Positives = 121/187 (64%), Gaps = 4/187 (2%)
Query: 60 NWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLT-DRIEIAAQNSWVG 118
NWKCNG+++S+++L+ N + FV++ K L+ + IAAQN+ +
Sbjct: 11 NWKCNGSQQSLSELIDLFNSTSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNA-IA 69
Query: 119 KGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 178
K GAFTGE+S+ LKD G W+VLGHSERR GE ++ + K A A++ G VIACIGE
Sbjct: 70 KSGAFTGEVSLPILKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACIGE 129
Query: 179 QLQEREAGKTFDVCFQQLKAYADAIPS--WDNVVIAYEPVWAIGTGKVATPEQAQEVHAA 236
LQERE+G+T V Q+ A A + W VVIAYEPVWAIGTGKVATP+QAQE HA
Sbjct: 130 TLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQEAHAL 189
Query: 237 LRDWLKN 243
+R W+ +
Sbjct: 190 IRSWVSS 196
>pdb|2YC6|A Chain A, Crystal Structure Of A Triple Mutant (A198v, C202a And
C222n) Of Triosephosphate Isomerase From Giardia Lamblia
Complexed With 2-Phosphoglycolic Acid
Length = 257
Score = 166 bits (419), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 120/191 (62%), Gaps = 5/191 (2%)
Query: 56 FVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQ-VKNSLTDRIEIAAQN 114
F+GGN+KCNG+ + I V+ + K+ V++ + + + ++ IAAQN
Sbjct: 7 FIGGNFKCNGSLDFIKSHVAAIAAHKIPDSVDVVIAPSAVHLSTAIAANTSKQLRIAAQN 66
Query: 115 SWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIA 174
++ GA+TGE SVE L+D+G K V++GHSERR ++GE D+ KKA AL +G+ VI
Sbjct: 67 VYLEGNGAWTGETSVEMLQDMGLKHVIVGHSERRRIMGETDEQSAKKAKRALEKGMTVIF 126
Query: 175 CIGEQLQEREAGKTFDVCFQQLKAYADAIPS----WDNVVIAYEPVWAIGTGKVATPEQA 230
C+GE L ER+A +T +V QL+A + W VVIAYEPVW+IGTG VATPEQA
Sbjct: 127 CVGETLDERKANRTMEVNIAQLEALGKELGESKMLWKEVVIAYEPVWSIGTGVVATPEQA 186
Query: 231 QEVHAALRDWL 241
+EVH LR W
Sbjct: 187 EEVHVGLRKWF 197
>pdb|2DP3|A Chain A, Crystal Structure Of A Double Mutant (C202aA198V) OF
TRIOSEPHOSPHATE Isomerase From Giardia Lamblia
Length = 257
Score = 165 bits (418), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 120/191 (62%), Gaps = 5/191 (2%)
Query: 56 FVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQ-VKNSLTDRIEIAAQN 114
F+GGN+KCNG+ + I V+ + K+ V++ + + + ++ IAAQN
Sbjct: 7 FIGGNFKCNGSLDFIKSHVAAIAAHKIPDSVDVVIAPSAVHLSTAIAANTSKQLRIAAQN 66
Query: 115 SWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIA 174
++ GA+TGE SVE L+D+G K V++GHSERR ++GE D+ KKA AL +G+ VI
Sbjct: 67 VYLEGNGAWTGETSVEMLQDMGLKHVIVGHSERRRIMGETDEQSAKKAKRALEKGMTVIF 126
Query: 175 CIGEQLQEREAGKTFDVCFQQLKAYADAIPS----WDNVVIAYEPVWAIGTGKVATPEQA 230
C+GE L ER+A +T +V QL+A + W VVIAYEPVW+IGTG VATPEQA
Sbjct: 127 CVGETLDERKANRTMEVNIAQLEALGKELGESKMLWKEVVIAYEPVWSIGTGVVATPEQA 186
Query: 231 QEVHAALRDWL 241
+EVH LR W
Sbjct: 187 EEVHVGLRKWF 197
>pdb|2YC7|A Chain A, Crystal Structure Of A Mutant (C202a) Of Triosephosphate
Isomerase From Giardia Lamblia Complexed With
2-Phosphoglycolic Acid
Length = 257
Score = 165 bits (418), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 120/191 (62%), Gaps = 5/191 (2%)
Query: 56 FVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQ-VKNSLTDRIEIAAQN 114
F+GGN+KCNG+ + I V+ + K+ V++ + + + ++ IAAQN
Sbjct: 7 FIGGNFKCNGSLDFIKSHVAAIAAHKIPDSVDVVIAPSAVHLSTAIAANTSKQLRIAAQN 66
Query: 115 SWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIA 174
++ GA+TGE SVE L+D+G K V++GHSERR ++GE D+ KKA AL +G+ VI
Sbjct: 67 VYLEGNGAWTGETSVEMLQDMGLKHVIVGHSERRRIMGETDEQSAKKAKRALEKGMTVIF 126
Query: 175 CIGEQLQEREAGKTFDVCFQQLKAYADAIPS----WDNVVIAYEPVWAIGTGKVATPEQA 230
C+GE L ER+A +T +V QL+A + W VVIAYEPVW+IGTG VATPEQA
Sbjct: 127 CVGETLDERKANRTMEVNIAQLEALGKELGESKMLWKEVVIAYEPVWSIGTGVVATPEQA 186
Query: 231 QEVHAALRDWL 241
+EVH LR W
Sbjct: 187 EEVHVGLRKWF 197
>pdb|2YC8|A Chain A, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|B Chain B, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|C Chain C, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|D Chain D, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|E Chain E, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|F Chain F, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|G Chain G, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|H Chain H, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|I Chain I, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|J Chain J, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|K Chain K, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|L Chain L, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|M Chain M, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|N Chain N, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|O Chain O, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|P Chain P, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|Q Chain Q, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|R Chain R, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|S Chain S, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|T Chain T, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia
Length = 255
Score = 165 bits (418), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 120/191 (62%), Gaps = 5/191 (2%)
Query: 56 FVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQ-VKNSLTDRIEIAAQN 114
F+GGN+KCNG+ + I V+ + K+ V++ + + + ++ IAAQN
Sbjct: 7 FIGGNFKCNGSLDFIKSHVAAIAAHKIPDSVDVVIAPSAVHLSTAIAANTSKQLRIAAQN 66
Query: 115 SWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIA 174
++ GA+TGE SVE L+D+G K V++GHSERR ++GE D+ KKA AL +G+ VI
Sbjct: 67 VYLEGNGAWTGETSVEMLQDMGLKHVIVGHSERRRIMGETDEQSAKKAKRALEKGMTVIF 126
Query: 175 CIGEQLQEREAGKTFDVCFQQLKAYADAIPS----WDNVVIAYEPVWAIGTGKVATPEQA 230
C+GE L ER+A +T +V QL+A + W VVIAYEPVW+IGTG VATPEQA
Sbjct: 127 CVGETLDERKANRTMEVNIAQLEALGKELGESKMLWKEVVIAYEPVWSIGTGVVATPEQA 186
Query: 231 QEVHAALRDWL 241
+EVH LR W
Sbjct: 187 EEVHVGLRKWF 197
>pdb|2V0T|A Chain A, The A178l Mutation In The C-Terminal Hinge Of The Flexible
Loop-6 Of Triosephosphate Isomerase (Tim) Induces A More
Closed Conformation Of This Hinge Region In Dimeric And
Monomeric Tim
pdb|2V0T|B Chain B, The A178l Mutation In The C-Terminal Hinge Of The Flexible
Loop-6 Of Triosephosphate Isomerase (Tim) Induces A More
Closed Conformation Of This Hinge Region In Dimeric And
Monomeric Tim
pdb|2V0T|C Chain C, The A178l Mutation In The C-Terminal Hinge Of The Flexible
Loop-6 Of Triosephosphate Isomerase (Tim) Induces A More
Closed Conformation Of This Hinge Region In Dimeric And
Monomeric Tim
pdb|2V0T|D Chain D, The A178l Mutation In The C-Terminal Hinge Of The Flexible
Loop-6 Of Triosephosphate Isomerase (Tim) Induces A More
Closed Conformation Of This Hinge Region In Dimeric And
Monomeric Tim
pdb|2V0T|E Chain E, The A178l Mutation In The C-Terminal Hinge Of The Flexible
Loop-6 Of Triosephosphate Isomerase (Tim) Induces A More
Closed Conformation Of This Hinge Region In Dimeric And
Monomeric Tim
pdb|2V0T|F Chain F, The A178l Mutation In The C-Terminal Hinge Of The Flexible
Loop-6 Of Triosephosphate Isomerase (Tim) Induces A More
Closed Conformation Of This Hinge Region In Dimeric And
Monomeric Tim
pdb|2V0T|G Chain G, The A178l Mutation In The C-Terminal Hinge Of The Flexible
Loop-6 Of Triosephosphate Isomerase (Tim) Induces A More
Closed Conformation Of This Hinge Region In Dimeric And
Monomeric Tim
pdb|2V0T|H Chain H, The A178l Mutation In The C-Terminal Hinge Of The Flexible
Loop-6 Of Triosephosphate Isomerase (Tim) Induces A More
Closed Conformation Of This Hinge Region In Dimeric And
Monomeric Tim
pdb|2V2C|A Chain A, The A178l Mutation In The C-Terminal Hinge Of The Flexible
Loop-6 Of Triosephosphate Isomerase (Tim) Induces A More
Closed Conformation Of This Hinge Region In Dimeric And
Monomeric Tim
Length = 250
Score = 165 bits (417), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 90/187 (48%), Positives = 120/187 (64%), Gaps = 4/187 (2%)
Query: 60 NWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLT-DRIEIAAQNSWVG 118
NWKCNG+++S+++L+ N + FV++ K L+ + IAAQN+ +
Sbjct: 11 NWKCNGSQQSLSELIDLFNSTSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNA-IA 69
Query: 119 KGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 178
K GAFTGE+S+ LKD G W+VLGHSERR GE ++ + K A A++ G VIACIGE
Sbjct: 70 KSGAFTGEVSLPILKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACIGE 129
Query: 179 QLQEREAGKTFDVCFQQLKAYADAIPS--WDNVVIAYEPVWAIGTGKVATPEQAQEVHAA 236
LQERE+G+T V Q+ A A + W VVIAYEPVWAIGTGKV TP+QAQE HA
Sbjct: 130 TLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVLTPQQAQEAHAL 189
Query: 237 LRDWLKN 243
+R W+ +
Sbjct: 190 IRSWVSS 196
>pdb|1KV5|A Chain A, Structure Of Trypanosoma Brucei Brucei Tim With The
Salt-Bridge- Forming Residue Arg191 Mutated To Ser
pdb|1KV5|B Chain B, Structure Of Trypanosoma Brucei Brucei Tim With The
Salt-Bridge- Forming Residue Arg191 Mutated To Ser
Length = 250
Score = 164 bits (415), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 90/187 (48%), Positives = 120/187 (64%), Gaps = 4/187 (2%)
Query: 60 NWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLT-DRIEIAAQNSWVG 118
NWKCNG+++S+++L+ N + FV++ K L+ + IAAQN+ +
Sbjct: 11 NWKCNGSQQSLSELIDLFNSTSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNA-IA 69
Query: 119 KGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 178
K GAFTGE+S+ LKD G W+VLGHSERR GE ++ + K A A++ G VIACIGE
Sbjct: 70 KSGAFTGEVSLPILKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACIGE 129
Query: 179 QLQEREAGKTFDVCFQQLKAYADAIPS--WDNVVIAYEPVWAIGTGKVATPEQAQEVHAA 236
LQERE+G+T V Q+ A A + W VVIAYEPVWAIGTGKVATP+QAQE HA
Sbjct: 130 TLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQEAHAL 189
Query: 237 LRDWLKN 243
+ W+ +
Sbjct: 190 ISSWVSS 196
>pdb|2J24|A Chain A, The Functional Role Of The Conserved Active Site Proline
Of Triosephosphate Isomerase
pdb|2J24|B Chain B, The Functional Role Of The Conserved Active Site Proline
Of Triosephosphate Isomerase
pdb|2J27|A Chain A, The Functional Role Of The Conserved Active Site Proline
Of Triosephosphate Isomerase
pdb|2J27|B Chain B, The Functional Role Of The Conserved Active Site Proline
Of Triosephosphate Isomerase
Length = 250
Score = 163 bits (413), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 90/187 (48%), Positives = 120/187 (64%), Gaps = 4/187 (2%)
Query: 60 NWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLT-DRIEIAAQNSWVG 118
NWKCNG+++S+++L+ N + FV++ K L+ + IAAQN+ +
Sbjct: 11 NWKCNGSQQSLSELIDLFNSTSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNA-IA 69
Query: 119 KGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 178
K GAFTGE+S+ LKD G W+VLGHSERR GE ++ + K A A++ G VIACIGE
Sbjct: 70 KSGAFTGEVSLPILKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACIGE 129
Query: 179 QLQEREAGKTFDVCFQQLKAYADAIPS--WDNVVIAYEPVWAIGTGKVATPEQAQEVHAA 236
LQERE+G+T V Q+ A A + W VVIAYE VWAIGTGKVATP+QAQE HA
Sbjct: 130 TLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEAVWAIGTGKVATPQQAQEAHAL 189
Query: 237 LRDWLKN 243
+R W+ +
Sbjct: 190 IRSWVSS 196
>pdb|2V5B|A Chain A, The Monomerization Of Triosephosphate Isomerase From
Trypanosoma Cruzi
Length = 244
Score = 163 bits (412), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/191 (45%), Positives = 112/191 (58%), Gaps = 11/191 (5%)
Query: 56 FVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTD-RIEIAAQN 114
NWKCNG++ + L+ LN A + F++I K LT+ + +IAAQN
Sbjct: 8 IAAANWKCNGSESLLVPLIETLNAATFDHDVQCVVAPTFLHIPMTKARLTNPKFQIAAQN 67
Query: 115 SWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIA 174
+ G A LKD G WVVLGHSERR GE ++ + +K A A + G VI
Sbjct: 68 A--GNADALAS------LKDYGISWVVLGHSERRLYYGETNEIVAEKVAQAXAAGFHVIV 119
Query: 175 CIGEQLQEREAGKTFDVCFQQLKAYADAIP--SWDNVVIAYEPVWAIGTGKVATPEQAQE 232
C+GE +EREAG+T V QL A A + +W VVIAYEPVWAIGTGKVATP+QAQE
Sbjct: 120 CVGETNEEREAGRTAAVVLTQLAAVAQKLSKEAWSRVVIAYEPVWAIGTGKVATPQQAQE 179
Query: 233 VHAALRDWLKN 243
VH LR W+++
Sbjct: 180 VHELLRRWVRS 190
>pdb|3PF3|A Chain A, Crystal Structure Of A Mutant (C202a) Of Triosephosphate
Isomerase From Giardia Lamblia Derivatized With Mmts
Length = 257
Score = 162 bits (410), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 119/191 (62%), Gaps = 5/191 (2%)
Query: 56 FVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQ-VKNSLTDRIEIAAQN 114
F+GGN+K NG+ + I V+ + K+ V++ + + + ++ IAAQN
Sbjct: 7 FIGGNFKXNGSLDFIKSHVAAIAAHKIPDSVDVVIAPSAVHLSTAIAANTSKQLRIAAQN 66
Query: 115 SWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIA 174
++ GA+TGE SVE L+D+G K V++GHSERR ++GE D+ KKA AL +G+ VI
Sbjct: 67 VYLEGNGAWTGETSVEMLQDMGLKHVIVGHSERRRIMGETDEQSAKKAKRALEKGMTVIF 126
Query: 175 CIGEQLQEREAGKTFDVCFQQLKAYADAIPS----WDNVVIAYEPVWAIGTGKVATPEQA 230
C+GE L ER+A +T +V QL+A + W VVIAYEPVW+IGTG VATPEQA
Sbjct: 127 CVGETLDERKANRTMEVNIAQLEALGKELGESKMLWKEVVIAYEPVWSIGTGVVATPEQA 186
Query: 231 QEVHAALRDWL 241
+EVH LR W
Sbjct: 187 EEVHVGLRKWF 197
>pdb|2VFD|A Chain A, Crystal Structure Of The F96s Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase
pdb|2VFD|B Chain B, Crystal Structure Of The F96s Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase
pdb|2VFE|A Chain A, Crystal Structure Of F96s Mutant Of Plasmodium Falciparum
Triosephosphate Isomerase With 3-Phosphoglycerate Bound
At The Dimer Interface
pdb|2VFE|B Chain B, Crystal Structure Of F96s Mutant Of Plasmodium Falciparum
Triosephosphate Isomerase With 3-Phosphoglycerate Bound
At The Dimer Interface
Length = 248
Score = 162 bits (409), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 112/191 (58%), Gaps = 1/191 (0%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXF-VYIDQVKNSLTDRIEIAA 112
K+FV NWKCNGT ESI L + N+ + V+ D + L +
Sbjct: 4 KYFVAANWKCNGTLESIKSLTNSFNNLDFDPSKLDVVVFPVSVHYDHTRKLLQSKFSTGI 63
Query: 113 QNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGV 172
QN G++TGE+S E KD+ ++V++GHSERR E D+ + +K +L L
Sbjct: 64 QNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHSERRKYFHETDEDVREKLQASLKNNLKA 123
Query: 173 IACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQE 232
+ C GE L++RE KT +V +Q+KA+ D I ++DNV++ YEP+WAIGTGK ATPEQAQ
Sbjct: 124 VVCFGESLEQREQNKTIEVITKQVKAFVDLIDNFDNVILVYEPLWAIGTGKTATPEQAQL 183
Query: 233 VHAALRDWLKN 243
VH +R +K+
Sbjct: 184 VHKEIRKIVKD 194
>pdb|3KRS|A Chain A, Structure Of Triosephosphate Isomerase From
Cryptosporidium Parvum At 1.55a Resolution
pdb|3KRS|B Chain B, Structure Of Triosephosphate Isomerase From
Cryptosporidium Parvum At 1.55a Resolution
Length = 271
Score = 161 bits (407), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 86/195 (44%), Positives = 110/195 (56%), Gaps = 5/195 (2%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVK----NSLTDRIE 109
K+FVGGN+KCNGTKES+ L+ + ++I VK N +
Sbjct: 25 KYFVGGNFKCNGTKESLKTLIDSFKQVESSNSEVYVFPTS-LHISLVKEFFGNDHPGVFK 83
Query: 110 IAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEG 169
I +QN GAFTGE+S E LKD+ ++GHSERR E DQ + K L G
Sbjct: 84 IGSQNISCTGNGAFTGEVSCEMLKDMDVDCSLVGHSERRQYYSETDQIVNNKVKKGLENG 143
Query: 170 LGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQ 229
L ++ CIGE L ERE GKT DV +QL + N+VIAYEP+WAIGTG VATP Q
Sbjct: 144 LKIVLCIGESLSERETGKTNDVIQKQLTEALKDVSDLSNLVIAYEPIWAIGTGVVATPGQ 203
Query: 230 AQEVHAALRDWLKNM 244
AQE HA +R+++ M
Sbjct: 204 AQEAHAFIREYVTRM 218
>pdb|2VFF|A Chain A, Crystal Structure Of The F96h Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase
pdb|2VFF|B Chain B, Crystal Structure Of The F96h Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase
pdb|2VFG|A Chain A, Crystal Structure Of The F96h Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase With 3-
Phosphoglycerate Bound At The Dimer Interface
pdb|2VFG|B Chain B, Crystal Structure Of The F96h Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase With 3-
Phosphoglycerate Bound At The Dimer Interface
pdb|2VFG|C Chain C, Crystal Structure Of The F96h Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase With 3-
Phosphoglycerate Bound At The Dimer Interface
pdb|2VFG|D Chain D, Crystal Structure Of The F96h Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase With 3-
Phosphoglycerate Bound At The Dimer Interface
Length = 248
Score = 160 bits (404), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 111/191 (58%), Gaps = 1/191 (0%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXF-VYIDQVKNSLTDRIEIAA 112
K+FV NWKCNGT ESI L + N+ + V+ D + L +
Sbjct: 4 KYFVAANWKCNGTLESIKSLTNSFNNLDFDPSKLDVVVFPVSVHYDHTRKLLQSKFSTGI 63
Query: 113 QNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGV 172
QN G++TGE+S E KD+ ++V++GH ERR E D+ + +K +L L
Sbjct: 64 QNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHHERRKYFHETDEDVREKLQASLKNNLKA 123
Query: 173 IACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQE 232
+ C GE L++RE KT +V +Q+KA+ D I ++DNV++ YEP+WAIGTGK ATPEQAQ
Sbjct: 124 VVCFGESLEQREQNKTIEVITKQVKAFVDLIDNFDNVILVYEPLWAIGTGKTATPEQAQL 183
Query: 233 VHAALRDWLKN 243
VH +R +K+
Sbjct: 184 VHKEIRKIVKD 194
>pdb|1YDV|A Chain A, Triosephosphate Isomerase (Tim)
pdb|1YDV|B Chain B, Triosephosphate Isomerase (Tim)
pdb|1M7O|A Chain A, Plasmodium Falciparum Triosephosphate Isomerase (Pftim)
Compled To Substrate Analog 3-Phosphoglycerate (3pg)
pdb|1M7O|B Chain B, Plasmodium Falciparum Triosephosphate Isomerase (Pftim)
Compled To Substrate Analog 3-Phosphoglycerate (3pg)
pdb|1M7P|A Chain A, Plasmodium Falciparum Triosephosphate Isomerase (Pftim)
Compled To Substrate Analog Glycerol-3-Phosphate (G3p).
pdb|1M7P|B Chain B, Plasmodium Falciparum Triosephosphate Isomerase (Pftim)
Compled To Substrate Analog Glycerol-3-Phosphate (G3p).
pdb|1LYX|A Chain A, Plasmodium Falciparum Triosephosphate Isomerase (Pftim)-
Phosphoglycolate Complex
pdb|1LZO|A Chain A, Plasmodium Falciparum Triosephosphate Isomerase-
Phosphoglycolate Complex
pdb|1LZO|B Chain B, Plasmodium Falciparum Triosephosphate Isomerase-
Phosphoglycolate Complex
pdb|1LZO|C Chain C, Plasmodium Falciparum Triosephosphate Isomerase-
Phosphoglycolate Complex
pdb|1LZO|D Chain D, Plasmodium Falciparum Triosephosphate Isomerase-
Phosphoglycolate Complex
pdb|1O5X|A Chain A, Plasmodium Falciparum Tim Complexed To 2-Phosphoglycerate
pdb|1O5X|B Chain B, Plasmodium Falciparum Tim Complexed To 2-Phosphoglycerate
pdb|2VFI|A Chain A, Crystal Structure Of The Plasmodium Falciparum
Triosephosphate Isomerase In The Loop Closed State With
3- Phosphoglycerate Bound At The Active Site And
Interface
pdb|2VFI|B Chain B, Crystal Structure Of The Plasmodium Falciparum
Triosephosphate Isomerase In The Loop Closed State With
3- Phosphoglycerate Bound At The Active Site And
Interface
Length = 248
Score = 159 bits (402), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 111/191 (58%), Gaps = 1/191 (0%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXF-VYIDQVKNSLTDRIEIAA 112
K+FV NWKCNGT ESI L + N+ + V+ D + L +
Sbjct: 4 KYFVAANWKCNGTLESIKSLTNSFNNLDFDPSKLDVVVFPVSVHYDHTRKLLQSKFSTGI 63
Query: 113 QNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGV 172
QN G++TGE+S E KD+ ++V++GH ERR E D+ + +K +L L
Sbjct: 64 QNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHFERRKYFHETDEDVREKLQASLKNNLKA 123
Query: 173 IACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQE 232
+ C GE L++RE KT +V +Q+KA+ D I ++DNV++ YEP+WAIGTGK ATPEQAQ
Sbjct: 124 VVCFGESLEQREQNKTIEVITKQVKAFVDLIDNFDNVILVYEPLWAIGTGKTATPEQAQL 183
Query: 233 VHAALRDWLKN 243
VH +R +K+
Sbjct: 184 VHKEIRKIVKD 194
>pdb|3PSW|A Chain A, Structure Of E97q Mutant Of Tim From Plasmodium Falciparum
pdb|3PSW|B Chain B, Structure Of E97q Mutant Of Tim From Plasmodium Falciparum
Length = 248
Score = 158 bits (399), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 111/191 (58%), Gaps = 1/191 (0%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXF-VYIDQVKNSLTDRIEIAA 112
K+FV NWKCNGT ESI L + N+ + V+ D + L +
Sbjct: 4 KYFVAANWKCNGTLESIKSLTNSFNNLDFDPSKLDVVVFPVSVHYDHTRKLLQSKFSTGI 63
Query: 113 QNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGV 172
QN G++TGE+S E KD+ ++V++GH +RR E D+ + +K +L L
Sbjct: 64 QNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHFQRRKYFHETDEDVREKLQASLKNNLKA 123
Query: 173 IACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQE 232
+ C GE L++RE KT +V +Q+KA+ D I ++DNV++ YEP+WAIGTGK ATPEQAQ
Sbjct: 124 VVCFGESLEQREQNKTIEVITKQVKAFVDLIDNFDNVILVYEPLWAIGTGKTATPEQAQL 183
Query: 233 VHAALRDWLKN 243
VH +R +K+
Sbjct: 184 VHKEIRKIVKD 194
>pdb|3PSV|A Chain A, Structure Of E97d Mutant Of Tim From Plasmodium Falciparum
pdb|3PSV|B Chain B, Structure Of E97d Mutant Of Tim From Plasmodium Falciparum
Length = 248
Score = 158 bits (399), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 111/191 (58%), Gaps = 1/191 (0%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXF-VYIDQVKNSLTDRIEIAA 112
K+FV NWKCNGT ESI L + N+ + V+ D + L +
Sbjct: 4 KYFVAANWKCNGTLESIKSLTNSFNNLDFDPSKLDVVVFPVSVHYDHTRKLLQSKFSTGI 63
Query: 113 QNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGV 172
QN G++TGE+S E KD+ ++V++GH +RR E D+ + +K +L L
Sbjct: 64 QNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHFDRRKYFHETDEDVREKLQASLKNNLKA 123
Query: 173 IACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQE 232
+ C GE L++RE KT +V +Q+KA+ D I ++DNV++ YEP+WAIGTGK ATPEQAQ
Sbjct: 124 VVCFGESLEQREQNKTIEVITKQVKAFVDLIDNFDNVILVYEPLWAIGTGKTATPEQAQL 183
Query: 233 VHAALRDWLKN 243
VH +R +K+
Sbjct: 184 VHKEIRKIVKD 194
>pdb|2VFH|A Chain A, Crystal Structure Of The F96w Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase Complexed With 3-
Phosphoglycerate
pdb|2VFH|B Chain B, Crystal Structure Of The F96w Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase Complexed With 3-
Phosphoglycerate
Length = 248
Score = 157 bits (398), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 111/191 (58%), Gaps = 1/191 (0%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXF-VYIDQVKNSLTDRIEIAA 112
K+FV NWKCNGT ESI L + N+ + V+ D + L +
Sbjct: 4 KYFVAANWKCNGTLESIKSLTNSFNNLDFDPSKLDVVVFPVSVHYDHTRKLLQSKFSTGI 63
Query: 113 QNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGV 172
QN G++TGE+S E KD+ ++V++GH ERR E D+ + +K +L L
Sbjct: 64 QNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHWERRKYFHETDEDVREKLQASLKNNLKA 123
Query: 173 IACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQE 232
+ C GE L++RE KT +V +Q+KA+ D I ++DNV++ YEP+WAIGTGK ATPEQAQ
Sbjct: 124 VVCFGESLEQREQNKTIEVITKQVKAFVDLIDNFDNVILVYEPLWAIGTGKTATPEQAQL 183
Query: 233 VHAALRDWLKN 243
VH +R +K+
Sbjct: 184 VHKEIRKIVKD 194
>pdb|1VGA|A Chain A, Structures Of Unligated And Inhibitor Complexes Of W168f
Mutant Of Triosephosphate Isomerase From Plasmodium
Falciparum
pdb|1VGA|B Chain B, Structures Of Unligated And Inhibitor Complexes Of W168f
Mutant Of Triosephosphate Isomerase From Plasmodium
Falciparum
pdb|1VGA|C Chain C, Structures Of Unligated And Inhibitor Complexes Of W168f
Mutant Of Triosephosphate Isomerase From Plasmodium
Falciparum
pdb|1VGA|D Chain D, Structures Of Unligated And Inhibitor Complexes Of W168f
Mutant Of Triosephosphate Isomerase From Plasmodium
Falciparum
pdb|1WOA|A Chain A, Structure Of The Loop6 Hinge Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase, W168f, Complexed
With Glycerol-2-Phosphate
pdb|1WOA|B Chain B, Structure Of The Loop6 Hinge Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase, W168f, Complexed
With Glycerol-2-Phosphate
pdb|1WOA|C Chain C, Structure Of The Loop6 Hinge Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase, W168f, Complexed
With Glycerol-2-Phosphate
pdb|1WOA|D Chain D, Structure Of The Loop6 Hinge Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase, W168f, Complexed
With Glycerol-2-Phosphate
pdb|1WOB|A Chain A, Structure Of A Loop6 Hinge Mutant Of Plasmodium Falciparum
Triosephosphate Isomerase, W168f, Complexed To Sulfate
pdb|1WOB|B Chain B, Structure Of A Loop6 Hinge Mutant Of Plasmodium Falciparum
Triosephosphate Isomerase, W168f, Complexed To Sulfate
pdb|1WOB|C Chain C, Structure Of A Loop6 Hinge Mutant Of Plasmodium Falciparum
Triosephosphate Isomerase, W168f, Complexed To Sulfate
pdb|1WOB|D Chain D, Structure Of A Loop6 Hinge Mutant Of Plasmodium Falciparum
Triosephosphate Isomerase, W168f, Complexed To Sulfate
Length = 248
Score = 157 bits (396), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 111/191 (58%), Gaps = 1/191 (0%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXF-VYIDQVKNSLTDRIEIAA 112
K+FV NWKCNGT ESI L + N+ + V+ D + L +
Sbjct: 4 KYFVAANWKCNGTLESIKSLTNSFNNLDFDPSKLDVVVFPVSVHYDHTRKLLQSKFSTGI 63
Query: 113 QNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGV 172
QN G++TGE+S E KD+ ++V++GH ERR E D+ + +K +L L
Sbjct: 64 QNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHFERRKYFHETDEDVREKLQASLKNNLKA 123
Query: 173 IACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQE 232
+ C GE L++RE KT +V +Q+KA+ D I ++DNV++ YEP++AIGTGK ATPEQAQ
Sbjct: 124 VVCFGESLEQREQNKTIEVITKQVKAFVDLIDNFDNVILVYEPLFAIGTGKTATPEQAQL 183
Query: 233 VHAALRDWLKN 243
VH +R +K+
Sbjct: 184 VHKEIRKIVKD 194
>pdb|1B9B|A Chain A, Triosephosphate Isomerase Of Thermotoga Maritima
pdb|1B9B|B Chain B, Triosephosphate Isomerase Of Thermotoga Maritima
Length = 255
Score = 156 bits (395), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 88/199 (44%), Positives = 121/199 (60%), Gaps = 10/199 (5%)
Query: 53 NKFFVGGNWKCNGT----KESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDR- 107
K + GNWK + T K+ ++ LV++L+D K F + +V L+ R
Sbjct: 3 RKLILAGNWKMHKTISEAKKFVSLLVNELHDVK---EFEIVVCPPFTALSEVGEILSGRN 59
Query: 108 IEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALS 167
I++ AQN + GAFTGEIS L++IG ++V++GHSERR + EDD+FI +K L
Sbjct: 60 IKLGAQNVFYEDQGAFTGEISPLMLQEIGVEYVIVGHSERRRIFKEDDEFINRKVKAVLE 119
Query: 168 EGLGVIACIGEQLQEREAGKTFDVCFQQLKA--YADAIPSWDNVVIAYEPVWAIGTGKVA 225
+G+ I C+GE L+ERE G TF V +Q++ Y VVIAYEPVWAIGTG+VA
Sbjct: 120 KGMTPILCVGETLEEREKGLTFCVVEKQVREGFYGLDKEEAKRVVIAYEPVWAIGTGRVA 179
Query: 226 TPEQAQEVHAALRDWLKNM 244
TP+QAQEVHA +R L M
Sbjct: 180 TPQQAQEVHAFIRKLLSEM 198
>pdb|3PWA|A Chain A, Structure Of C126a Mutant Of Plasmodium Falciparum
Triosephosphate Isomerase
pdb|3PWA|B Chain B, Structure Of C126a Mutant Of Plasmodium Falciparum
Triosephosphate Isomerase
Length = 248
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 110/191 (57%), Gaps = 1/191 (0%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXF-VYIDQVKNSLTDRIEIAA 112
K+FV NWKCNGT ESI L + N+ + V+ D + L +
Sbjct: 4 KYFVAANWKCNGTLESIKSLTNSFNNLDFDPSKLDVVVFPVSVHYDHTRKLLQSKFSTGI 63
Query: 113 QNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGV 172
QN G++TGE+S E KD+ ++V++GH ERR E D+ + +K +L L
Sbjct: 64 QNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHFERRKYFHETDEDVREKLQASLKNNLKA 123
Query: 173 IACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQE 232
+ GE L++RE KT +V +Q+KA+ D I ++DNV++ YEP+WAIGTGK ATPEQAQ
Sbjct: 124 VVAFGESLEQREQNKTIEVITKQVKAFVDLIDNFDNVILVYEPLWAIGTGKTATPEQAQL 183
Query: 233 VHAALRDWLKN 243
VH +R +K+
Sbjct: 184 VHKEIRKIVKD 194
>pdb|3PVF|A Chain A, Structure Of C126s Mutant Of Plasmodium Falciparum
Triosephosphate Isomerase Complexed With Pga
pdb|3PY2|A Chain A, Structure Of C126s Mutant Of Plasmodium Falciparum
Triosephosphate Isomerase
pdb|3PY2|B Chain B, Structure Of C126s Mutant Of Plasmodium Falciparum
Triosephosphate Isomerase
Length = 248
Score = 155 bits (392), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 110/191 (57%), Gaps = 1/191 (0%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXF-VYIDQVKNSLTDRIEIAA 112
K+FV NWKCNGT ESI L + N+ + V+ D + L +
Sbjct: 4 KYFVAANWKCNGTLESIKSLTNSFNNLDFDPSKLDVVVFPVSVHYDHTRKLLQSKFSTGI 63
Query: 113 QNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGV 172
QN G++TGE+S E KD+ ++V++GH ERR E D+ + +K +L L
Sbjct: 64 QNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHFERRKYFHETDEDVREKLQASLKNNLKA 123
Query: 173 IACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQE 232
+ GE L++RE KT +V +Q+KA+ D I ++DNV++ YEP+WAIGTGK ATPEQAQ
Sbjct: 124 VVSFGESLEQREQNKTIEVITKQVKAFVDLIDNFDNVILVYEPLWAIGTGKTATPEQAQL 183
Query: 233 VHAALRDWLKN 243
VH +R +K+
Sbjct: 184 VHKEIRKIVKD 194
>pdb|1TRE|A Chain A, The Structure Of Triosephosphate Isomerase From
Escherichia Coli Determined At 2.6 Angstrom Resolution
pdb|1TRE|B Chain B, The Structure Of Triosephosphate Isomerase From
Escherichia Coli Determined At 2.6 Angstrom Resolution
Length = 255
Score = 146 bits (368), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/202 (42%), Positives = 113/202 (55%), Gaps = 8/202 (3%)
Query: 56 FVGGNWKCNGTKESITKLVSDLNDAKLEXXX-XXXXXXXFVYIDQVKNSLT-DRIEIAAQ 113
V GNWK NG++ + +LVS+L +YID K I + AQ
Sbjct: 5 LVMGNWKLNGSRHMVHELVSNLRKELAGVAGCAVAIAPPEMYIDMAKREAEGSHIMLGAQ 64
Query: 114 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 173
N + GAFTGE S LKDIG +++++GHSERR E D+ I KK A +GL +
Sbjct: 65 NVNLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPV 124
Query: 174 ACIGEQLQEREAGKTFDVCFQQLKAY--ADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQ 231
CIGE E EAGKT +VC +Q+ A +++ VIAYEPVWAIGTGK ATP QAQ
Sbjct: 125 LCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQ 184
Query: 232 EVHAALRDWL----KNMSQQTL 249
VH +RD + N+++Q +
Sbjct: 185 AVHKFIRDHIAKVDANIAEQVI 206
>pdb|2WSQ|A Chain A, Monotim Mutant Rmm0-1, Dimeric Form.
pdb|2WSQ|B Chain B, Monotim Mutant Rmm0-1, Dimeric Form.
pdb|2WSQ|C Chain C, Monotim Mutant Rmm0-1, Dimeric Form.
pdb|2WSQ|D Chain D, Monotim Mutant Rmm0-1, Dimeric Form
Length = 242
Score = 146 bits (368), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/187 (45%), Positives = 112/187 (59%), Gaps = 11/187 (5%)
Query: 60 NWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLT-DRIEIAAQNSWVG 118
NWKCNG+++S+++L+ N + FV++ K L+ + IAAQN+
Sbjct: 10 NWKCNGSQQSLSELIDLFNSTSINHDVQCVVAPSFVHLAMTKERLSHPKFVIAAQNAGNA 69
Query: 119 KGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 178
G A LKD G W+VLGHSERR GE ++ + K A A++ G VIACIGE
Sbjct: 70 DGLA--------SLKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACIGE 121
Query: 179 QLQEREAGKTFDVCFQQLKAYADAIPS--WDNVVIAYEPVWAIGTGKVATPEQAQEVHAA 236
LQERE+G+T V Q+ A A + W VVIAYEPVWAIGTGKVATP+QAQE HA
Sbjct: 122 TLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQETHAL 181
Query: 237 LRDWLKN 243
+R W+ +
Sbjct: 182 IRSWVSS 188
>pdb|1TRI|A Chain A, The Crystal Structure Of An Engineered Monomeric
Triosephosphate Isomerase, Monotim: The Correct
Modelling Of An Eight-Residue Loop
Length = 243
Score = 146 bits (368), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/187 (45%), Positives = 112/187 (59%), Gaps = 11/187 (5%)
Query: 60 NWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLT-DRIEIAAQNSWVG 118
NWKCNG+++S+++L+ N + FV++ K L+ + IAAQN+ G
Sbjct: 11 NWKCNGSQQSLSELIDLFNSTSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNA--G 68
Query: 119 KGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 178
A LKD G W+VLGHSERR GE ++ + K A A++ G VIACIGE
Sbjct: 69 NADALA------SLKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACIGE 122
Query: 179 QLQEREAGKTFDVCFQQLKAYADAIPS--WDNVVIAYEPVWAIGTGKVATPEQAQEVHAA 236
LQERE+G+T V Q+ A A + W VVIAYEPVWAIGTGKVATP+QAQE HA
Sbjct: 123 TLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQEAHAL 182
Query: 237 LRDWLKN 243
+R W+ +
Sbjct: 183 IRSWVSS 189
>pdb|1TMH|A Chain A, Modular Mutagenesis Of A Tim-barrel Enzyme: The Crystal
Structure Of A Chimeric E. Coli Tim Having The Eighth
(beta-alpha)-unit Replaced By The Equivalent Unit Of
Chicken Tim
pdb|1TMH|B Chain B, Modular Mutagenesis Of A Tim-barrel Enzyme: The Crystal
Structure Of A Chimeric E. Coli Tim Having The Eighth
(beta-alpha)-unit Replaced By The Equivalent Unit Of
Chicken Tim
pdb|1TMH|C Chain C, Modular Mutagenesis Of A Tim-barrel Enzyme: The Crystal
Structure Of A Chimeric E. Coli Tim Having The Eighth
(beta-alpha)-unit Replaced By The Equivalent Unit Of
Chicken Tim
pdb|1TMH|D Chain D, Modular Mutagenesis Of A Tim-barrel Enzyme: The Crystal
Structure Of A Chimeric E. Coli Tim Having The Eighth
(beta-alpha)-unit Replaced By The Equivalent Unit Of
Chicken Tim
Length = 254
Score = 146 bits (368), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/202 (42%), Positives = 113/202 (55%), Gaps = 8/202 (3%)
Query: 56 FVGGNWKCNGTKESITKLVSDLNDAKLEXXX-XXXXXXXFVYIDQVKNSLT-DRIEIAAQ 113
V GNWK NG++ + +LVS+L +YID K I + AQ
Sbjct: 5 LVMGNWKLNGSRHMVHELVSNLRKELAGVAGCAVAIAPPEMYIDMAKREAEGSHIMLGAQ 64
Query: 114 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 173
N + GAFTGE S LKDIG +++++GHSERR E D+ I KK A +GL +
Sbjct: 65 NVDLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPV 124
Query: 174 ACIGEQLQEREAGKTFDVCFQQLKAY--ADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQ 231
CIGE E EAGKT +VC +Q+ A +++ VIAYEPVWAIGTGK ATP QAQ
Sbjct: 125 LCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQ 184
Query: 232 EVHAALRDWL----KNMSQQTL 249
VH +RD + N+++Q +
Sbjct: 185 AVHKFIRDHIAKVDANIAEQVI 206
>pdb|2WSR|A Chain A, Monotim Mutant Rmm0-1, Monomeric Form
Length = 242
Score = 145 bits (367), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/187 (45%), Positives = 111/187 (59%), Gaps = 11/187 (5%)
Query: 60 NWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLT-DRIEIAAQNSWVG 118
NWKCNG+++S+++L+ N + FV I K L+ + IAAQN+
Sbjct: 10 NWKCNGSQQSLSELIDLFNSTSINHDVQCVVAPRFVMIAMTKERLSHPKFVIAAQNAGNA 69
Query: 119 KGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 178
G A LKD G W+VLGHSERR GE ++ + K A A++ G VIACIGE
Sbjct: 70 DGLA--------SLKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACIGE 121
Query: 179 QLQEREAGKTFDVCFQQLKAYADAIPS--WDNVVIAYEPVWAIGTGKVATPEQAQEVHAA 236
LQERE+G+T V Q+ A A + W VVIAYEPVWAIGTGKVATP+QAQE HA
Sbjct: 122 TLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQETHAL 181
Query: 237 LRDWLKN 243
+R W+ +
Sbjct: 182 IRSWVSS 188
>pdb|4IOT|A Chain A, High-resolution Structure Of Triosephosphate Isomerase
From E. Coli
pdb|4IOT|B Chain B, High-resolution Structure Of Triosephosphate Isomerase
From E. Coli
Length = 255
Score = 145 bits (367), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/202 (42%), Positives = 113/202 (55%), Gaps = 8/202 (3%)
Query: 56 FVGGNWKCNGTKESITKLVSDLNDAKLEXXX-XXXXXXXFVYIDQVKNSLT-DRIEIAAQ 113
V GNWK NG++ + +LVS+L +YID K I + AQ
Sbjct: 5 LVMGNWKLNGSRHMVHELVSNLRKELAGVAGCAVAIAPPEMYIDMAKREAEGSHIMLGAQ 64
Query: 114 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 173
N + GAFTGE S LKDIG +++++GHSERR E D+ I KK A +GL +
Sbjct: 65 NVDLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPV 124
Query: 174 ACIGEQLQEREAGKTFDVCFQQLKAY--ADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQ 231
CIGE E EAGKT +VC +Q+ A +++ VIAYEPVWAIGTGK ATP QAQ
Sbjct: 125 LCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQ 184
Query: 232 EVHAALRDWL----KNMSQQTL 249
VH +RD + N+++Q +
Sbjct: 185 AVHKFIRDHIAKVDANIAEQVI 206
>pdb|1TTI|A Chain A, Three New Crystal Structures Of Point Mutation Variants Of
Monotim: Conformational Flexibility Of Loop-1,Loop-4 And
Loop-8
Length = 243
Score = 145 bits (366), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/187 (45%), Positives = 112/187 (59%), Gaps = 11/187 (5%)
Query: 60 NWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLT-DRIEIAAQNSWVG 118
NWKCNG+++S+++L+ N + FV++ K L+ + IAAQN+
Sbjct: 11 NWKCNGSQQSLSELIDLFNSTSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNAGNA 70
Query: 119 KGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 178
G A LKD G W+VLGHSERR GE ++ + K A A++ G VIACIGE
Sbjct: 71 DGLA--------SLKDFGVNWIVLGHSERRWYYGETNEIVADKVAAAVASGFMVIACIGE 122
Query: 179 QLQEREAGKTFDVCFQQLKAYADAIPS--WDNVVIAYEPVWAIGTGKVATPEQAQEVHAA 236
LQERE+G+T V Q+ A A + W VVIAYEPVWAIGTGKVATP+QAQE HA
Sbjct: 123 TLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQEAHAL 182
Query: 237 LRDWLKN 243
+R W+ +
Sbjct: 183 IRSWVSS 189
>pdb|1AW1|A Chain A, Triosephosphate Isomerase Of Vibrio Marinus Complexed With
2-Phosphoglycolate
pdb|1AW1|B Chain B, Triosephosphate Isomerase Of Vibrio Marinus Complexed With
2-Phosphoglycolate
pdb|1AW1|D Chain D, Triosephosphate Isomerase Of Vibrio Marinus Complexed With
2-Phosphoglycolate
pdb|1AW1|E Chain E, Triosephosphate Isomerase Of Vibrio Marinus Complexed With
2-Phosphoglycolate
pdb|1AW1|G Chain G, Triosephosphate Isomerase Of Vibrio Marinus Complexed With
2-Phosphoglycolate
pdb|1AW1|H Chain H, Triosephosphate Isomerase Of Vibrio Marinus Complexed With
2-Phosphoglycolate
pdb|1AW1|J Chain J, Triosephosphate Isomerase Of Vibrio Marinus Complexed With
2-Phosphoglycolate
pdb|1AW1|K Chain K, Triosephosphate Isomerase Of Vibrio Marinus Complexed With
2-Phosphoglycolate
pdb|1AW2|A Chain A, Triosephosphate Isomerase Of Vibrio Marinus
pdb|1AW2|B Chain B, Triosephosphate Isomerase Of Vibrio Marinus
pdb|1AW2|D Chain D, Triosephosphate Isomerase Of Vibrio Marinus
pdb|1AW2|E Chain E, Triosephosphate Isomerase Of Vibrio Marinus
pdb|1AW2|G Chain G, Triosephosphate Isomerase Of Vibrio Marinus
pdb|1AW2|H Chain H, Triosephosphate Isomerase Of Vibrio Marinus
pdb|1AW2|J Chain J, Triosephosphate Isomerase Of Vibrio Marinus
pdb|1AW2|K Chain K, Triosephosphate Isomerase Of Vibrio Marinus
Length = 256
Score = 144 bits (364), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/197 (40%), Positives = 116/197 (58%), Gaps = 8/197 (4%)
Query: 57 VGGNWKCNGTKESITKLVSDLNDAKLEXXX--XXXXXXXFVYIDQVKNSLTDR---IEIA 111
V GNWK NG+KE + L++ LN A+LE +++D + +LT+ I +
Sbjct: 6 VMGNWKLNGSKEMVVDLLNGLN-AELEGVTGVDVAVAPPALFVDLAERTLTEAGSAIILG 64
Query: 112 AQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLG 171
AQN+ + GAFTG++S LK+ G +++GHSERR E D+F+ KK A+ GL
Sbjct: 65 AQNTDLNNSGAFTGDMSPAMLKEFGATHIIIGHSERREYHAESDEFVAKKFAFLKENGLT 124
Query: 172 VIACIGEQLQEREAGKTFDVCFQQLKAYAD--AIPSWDNVVIAYEPVWAIGTGKVATPEQ 229
+ CIGE + EAG+T VC +QL A + + + + +IAYEP+WAIGTGK AT E
Sbjct: 125 PVLCIGESDAQNEAGETMAVCARQLDAVINTQGVEALEGAIIAYEPIWAIGTGKAATAED 184
Query: 230 AQEVHAALRDWLKNMSQ 246
AQ +HA +R + S+
Sbjct: 185 AQRIHAQIRAHIAEKSE 201
>pdb|1ML1|A Chain A, Protein Engineering With Monomeric Triosephosphate
Isomerase: The Modelling And Structure Verification Of A
Seven Residue Loop
pdb|1ML1|C Chain C, Protein Engineering With Monomeric Triosephosphate
Isomerase: The Modelling And Structure Verification Of A
Seven Residue Loop
pdb|1ML1|E Chain E, Protein Engineering With Monomeric Triosephosphate
Isomerase: The Modelling And Structure Verification Of A
Seven Residue Loop
pdb|1ML1|G Chain G, Protein Engineering With Monomeric Triosephosphate
Isomerase: The Modelling And Structure Verification Of A
Seven Residue Loop
pdb|1ML1|I Chain I, Protein Engineering With Monomeric Triosephosphate
Isomerase: The Modelling And Structure Verification Of A
Seven Residue Loop
pdb|1ML1|K Chain K, Protein Engineering With Monomeric Triosephosphate
Isomerase: The Modelling And Structure Verification Of A
Seven Residue Loop
Length = 243
Score = 142 bits (359), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/187 (44%), Positives = 111/187 (59%), Gaps = 11/187 (5%)
Query: 60 NWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLT-DRIEIAAQNSWVG 118
NWKC+G+ +S+++L+ N + FV++ K L+ + IAAQN+ G
Sbjct: 11 NWKCSGSPDSLSELIDLFNSTSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNA--G 68
Query: 119 KGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 178
A LKD G W+VLGHSERR GE ++ + K A A++ G VIACIGE
Sbjct: 69 NADALA------SLKDFGVNWIVLGHSERRWYYGETNEIVADKVAAAVASGFMVIACIGE 122
Query: 179 QLQEREAGKTFDVCFQQLKAYADAIPS--WDNVVIAYEPVWAIGTGKVATPEQAQEVHAA 236
LQERE+G+T V Q+ A A + W VVIAYEPVWAIGTGKVATP+QAQE HA
Sbjct: 123 TLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQEAHAL 182
Query: 237 LRDWLKN 243
+R W+ +
Sbjct: 183 IRSWVSS 189
>pdb|1MSS|A Chain A, Large Scale Structural Rearrangements Of The Front Loops
In Monomerised Triosephosphate Isomerase, As Deduced
From The Comparison Of The Structural Properties Of
Monotim And Its Point Mutation Variant Monoss
pdb|1MSS|B Chain B, Large Scale Structural Rearrangements Of The Front Loops
In Monomerised Triosephosphate Isomerase, As Deduced
From The Comparison Of The Structural Properties Of
Monotim And Its Point Mutation Variant Monoss
pdb|1TTJ|A Chain A, Three New Crystal Structures Of Point Mutation Variants Of
Monotim: Conformational Flexibility Of Loop-1,Loop-4 And
Loop-8
Length = 243
Score = 140 bits (353), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 83/191 (43%), Positives = 110/191 (57%), Gaps = 11/191 (5%)
Query: 56 FVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLT-DRIEIAAQN 114
NWKCNG+++S+++L+ N + ++ K L+ + IAAQN
Sbjct: 7 IAAANWKCNGSQQSLSELIDLFNSTSINHDVQCVVASTSSHLAMTKERLSHPKFVIAAQN 66
Query: 115 SWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIA 174
+ G A LKD G W+VLGHSERR GE ++ + K A A++ G VIA
Sbjct: 67 A--GNADALA------SLKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIA 118
Query: 175 CIGEQLQEREAGKTFDVCFQQLKAYADAIPS--WDNVVIAYEPVWAIGTGKVATPEQAQE 232
CIGE LQERE+G+T V Q+ A A + W VVIAYEPVWAIGTGKVATP+QAQE
Sbjct: 119 CIGETLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQE 178
Query: 233 VHAALRDWLKN 243
HA +R W+ +
Sbjct: 179 AHALIRSWVSS 189
>pdb|2Y6Z|A Chain A, Crystallographic Structure Of Gm23 An Example Of Catalytic
Migration From Tim To Thiamin Phosphate Synthase
Length = 256
Score = 137 bits (345), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 83/189 (43%), Positives = 107/189 (56%), Gaps = 13/189 (6%)
Query: 60 NWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQ--VKNSLT-DRIEIAAQNSW 116
NWKCNG +S+++L+ N + + Q K L+ + IAAQN+
Sbjct: 22 NWKCNGGGQSLSELIDLFNSTSINHDVQCVVAPSWYMGAQAMTKERLSHPKFVIAAQNA- 80
Query: 117 VGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACI 176
G A LKD G W+VLGHSERR GE ++ + K A A++ G VIACI
Sbjct: 81 -GNADALA------SLKDFGISWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACI 133
Query: 177 GEQLQEREAGKTFDVCFQQLKAYADAI--PSWDNVVIAYEPVWAIGTGKVATPEQAQEVH 234
GE LQER +G+T V Q+ A A + W VVIAYEPVWAIGTGKVATP+QAQE H
Sbjct: 134 GETLQERSSGRTAVVVLTQITAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQEAH 193
Query: 235 AALRDWLKN 243
A +R W+ +
Sbjct: 194 ALIRSWVSS 202
>pdb|2Y70|A Chain A, Crystallographic Structure Of Gm23, Mutant G89d, An
Example Of Catalytic Migration From Tim To Thiamin
Phosphate Synthase.
pdb|2Y70|B Chain B, Crystallographic Structure Of Gm23, Mutant G89d, An
Example Of Catalytic Migration From Tim To Thiamin
Phosphate Synthase.
pdb|2Y70|C Chain C, Crystallographic Structure Of Gm23, Mutant G89d, An
Example Of Catalytic Migration From Tim To Thiamin
Phosphate Synthase.
pdb|2Y70|D Chain D, Crystallographic Structure Of Gm23, Mutant G89d, An
Example Of Catalytic Migration From Tim To Thiamin
Phosphate Synthase
Length = 245
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 108/193 (55%), Gaps = 13/193 (6%)
Query: 56 FVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQ--VKNSLT-DRIEIAA 112
NWKCNG+++S+++L+ N + + Q K L+ + IAA
Sbjct: 7 IAAANWKCNGSQQSLSELIDLFNSTSINHDVQCVVAPSWYMGAQAMTKERLSHPKFVIAA 66
Query: 113 QNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGV 172
QN+ G A LKD G W+VL HSERR GE ++ + K A A++ G V
Sbjct: 67 QNA--GNADALA------SLKDFGISWIVLDHSERRAYYGETNEIVADKVAAAVASGFMV 118
Query: 173 IACIGEQLQEREAGKTFDVCFQQLKAYADAI--PSWDNVVIAYEPVWAIGTGKVATPEQA 230
IACIGE LQER +G+T V Q+ A A + W VVIAYEPVWAIGTGKVATP+QA
Sbjct: 119 IACIGETLQERSSGRTAVVVLTQITAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQA 178
Query: 231 QEVHAALRDWLKN 243
QE HA +R W+ +
Sbjct: 179 QEAHALIRSWVSS 191
>pdb|1DKW|A Chain A, Crystal Structure Of Triose-Phosphate Isomerase With
Modified Substrate Binding Site
pdb|1DKW|B Chain B, Crystal Structure Of Triose-Phosphate Isomerase With
Modified Substrate Binding Site
Length = 238
Score = 136 bits (342), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/189 (43%), Positives = 108/189 (57%), Gaps = 12/189 (6%)
Query: 58 GGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLT-DRIEIAAQNSW 116
NWK +G+ +S+++L+ N + FV++ K L+ + IAAQN+
Sbjct: 8 AANWK-SGSPDSLSELIDLFNSTSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNA- 65
Query: 117 VGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACI 176
E S+ LKD G W+VLGHSERR GE ++ + K A A++ G VIACI
Sbjct: 66 -------GNEDSLPSLKDFGVNWIVLGHSERRWYYGETNEIVADKVAAAVASGFMVIACI 118
Query: 177 GEQLQEREAGKTFDVCFQQ--LKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVH 234
GE LQERE+G+T V Q A W VVIAYEPVWAIGTGKVATP+QAQE H
Sbjct: 119 GETLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQEAH 178
Query: 235 AALRDWLKN 243
A +R W+ +
Sbjct: 179 ALIRSWVSS 187
>pdb|1YYA|A Chain A, Crystal Structure Of Tt0473, Putative Triosephosphate
Isomerase From Thermus Thermophilus Hb8
pdb|1YYA|B Chain B, Crystal Structure Of Tt0473, Putative Triosephosphate
Isomerase From Thermus Thermophilus Hb8
Length = 250
Score = 135 bits (339), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 102/192 (53%), Gaps = 3/192 (1%)
Query: 53 NKFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTD-RIEIA 111
+ V GNWK + T ++L F + K L + ++
Sbjct: 2 RRVLVAGNWKMHKTPSEARVWFAELKRLLPPLQSEAAVLPAFPILPVAKEVLAETQVGYG 61
Query: 112 AQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLG 171
AQ+ K GA+TGE+S L D+GC++ ++GHSERR GE D + +KA L EG+
Sbjct: 62 AQDVSAHKEGAYTGEVSARMLSDLGCRYAIVGHSERRRYHGETDALVAEKAKRLLEEGIT 121
Query: 172 VIACIGEQLQEREAGKTFDVCFQQLKAYADAI--PSWDNVVIAYEPVWAIGTGKVATPEQ 229
I C+GE L+ RE G+ +QL+ + + P + +VIAYEPVWAIGTGK ATPE
Sbjct: 122 PILCVGEPLEVREKGEAVPYTLRQLRGSLEGVEPPGPEALVIAYEPVWAIGTGKNATPED 181
Query: 230 AQEVHAALRDWL 241
A+ +H A+R L
Sbjct: 182 AEAMHQAIRKAL 193
>pdb|2VEK|A Chain A, Structure-Based Enzyme Engineering Efforts With An
Inactive Monomeric Tim Variant: The Importance Of A
Single Point Mutation For Generating An Active Site With
Suitable Binding Properties
pdb|2VEK|B Chain B, Structure-Based Enzyme Engineering Efforts With An
Inactive Monomeric Tim Variant: The Importance Of A
Single Point Mutation For Generating An Active Site With
Suitable Binding Properties
pdb|2VEL|A Chain A, Structure-based Enzyme Engineering Efforts With An
Inactive Monomeric Tim Variant: The Importance Of A
Single Point Mutation For Generating An Active Site With
Suitable Binding Properties
pdb|2VEL|B Chain B, Structure-based Enzyme Engineering Efforts With An
Inactive Monomeric Tim Variant: The Importance Of A
Single Point Mutation For Generating An Active Site With
Suitable Binding Properties
pdb|2VEM|A Chain A, Structure-Based Enzyme Engineering Efforts With An
Inactive Monomeric Tim Variant: The Importance Of A
Single Point Mutation For Generating An Active Site With
Suitable Binding Properties
pdb|2VEM|B Chain B, Structure-Based Enzyme Engineering Efforts With An
Inactive Monomeric Tim Variant: The Importance Of A
Single Point Mutation For Generating An Active Site With
Suitable Binding Properties
pdb|2VEN|A Chain A, Structure-Based Enzyme Engineering Efforts With An
Inactive Monomeric Tim Variant: The Importance Of A
Single Point Mutation For Generating An Active Site With
Suitable Binding Properties
pdb|2VEN|B Chain B, Structure-Based Enzyme Engineering Efforts With An
Inactive Monomeric Tim Variant: The Importance Of A
Single Point Mutation For Generating An Active Site With
Suitable Binding Properties
pdb|2X16|A Chain A, Crystallographic Binding Studies With An Engineered
Monomeric Variant Of Triosephosphate Isomerase
pdb|2X16|B Chain B, Crystallographic Binding Studies With An Engineered
Monomeric Variant Of Triosephosphate Isomerase
pdb|2X1R|A Chain A, Crystallographic Binding Studies With An Engineered
Monomeric Variant Of Triosephosphate Isomerase
pdb|2X1R|B Chain B, Crystallographic Binding Studies With An Engineered
Monomeric Variant Of Triosephosphate Isomerase
pdb|2X1S|A Chain A, Crystallographic Binding Studies With An Engineered
Monomeric Variant Of Triosephosphate Isomerase
pdb|2X1S|B Chain B, Crystallographic Binding Studies With An Engineered
Monomeric Variant Of Triosephosphate Isomerase
pdb|2X1T|A Chain A, Crystallographic Binding Studies With An Engineered
Monomeric Variant Of Triosephosphate Isomerase
pdb|2X1T|B Chain B, Crystallographic Binding Studies With An Engineered
Monomeric Variant Of Triosephosphate Isomerase
pdb|2X1U|A Chain A, Crystallographic Binding Studies With An Engineered
Monomeric Variant Of Triosephosphate Isomerase
pdb|2X1U|B Chain B, Crystallographic Binding Studies With An Engineered
Monomeric Variant Of Triosephosphate Isomerase
pdb|2X2G|A Chain A, Crystallographic Binding Studies With An Engineered
Monomeric Variant Of Triosephosphate Isomerase
pdb|2X2G|B Chain B, Crystallographic Binding Studies With An Engineered
Monomeric Variant Of Triosephosphate Isomerase
Length = 238
Score = 134 bits (337), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 82/189 (43%), Positives = 107/189 (56%), Gaps = 12/189 (6%)
Query: 58 GGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLT-DRIEIAAQNSW 116
NWK +G+ +S+++L+ N + FV++ K L+ + IAAQN+
Sbjct: 8 AANWK-SGSPDSLSELIDLFNSTSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNA- 65
Query: 117 VGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACI 176
G A LKD G W+VLGHSERR GE ++ + K A A++ G VIACI
Sbjct: 66 -GNADALA------SLKDFGVNWIVLGHSERRWYYGETNEIVADKVAAAVASGFMVIACI 118
Query: 177 GEQLQEREAGKTFDVCFQQ--LKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVH 234
GE LQERE+G+T V Q A W VVIAYEPVWAIGTGKVATP+QAQE H
Sbjct: 119 GETLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQEAH 178
Query: 235 AALRDWLKN 243
A +R W+ +
Sbjct: 179 ALIRSWVSS 187
>pdb|2VEI|A Chain A, Structure-Based Enzyme Engineering Efforts With An
Inactive Monomeric Tim Variant: The Importance Of A
Single Point Mutation For Generating An Active Site With
Suitable Binding Properties
pdb|2VEI|B Chain B, Structure-Based Enzyme Engineering Efforts With An
Inactive Monomeric Tim Variant: The Importance Of A
Single Point Mutation For Generating An Active Site With
Suitable Binding Properties
pdb|2VEI|C Chain C, Structure-Based Enzyme Engineering Efforts With An
Inactive Monomeric Tim Variant: The Importance Of A
Single Point Mutation For Generating An Active Site With
Suitable Binding Properties
Length = 238
Score = 134 bits (337), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 82/189 (43%), Positives = 107/189 (56%), Gaps = 12/189 (6%)
Query: 58 GGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLT-DRIEIAAQNSW 116
NWK +G+ +S+++L+ N + FV++ K L+ + IAAQN+
Sbjct: 8 AANWK-SGSPDSLSELIDLFNSTSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNA- 65
Query: 117 VGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACI 176
G A LKD G W+VLGHSERR GE ++ + K A A++ G VIACI
Sbjct: 66 -GNADALA------SLKDFGVNWIVLGHSERRWYYGETNEIVADKVAAAVASGFMVIACI 118
Query: 177 GEQLQEREAGKTFDVCFQQ--LKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVH 234
GE LQERE+G+T V Q A W VVIAYEPVWAIGTGKVATP+QAQE H
Sbjct: 119 GETLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQEAH 178
Query: 235 AALRDWLKN 243
A +R W+ +
Sbjct: 179 ALIRSWVSS 187
>pdb|2V2D|A Chain A, The A178l Mutation In The C-Terminal Hinge Of The Flexible
Loop-6 Of Triosephosphate Isomerase (Tim) Induces A More
Closed Conformation Of This Hinge Region In Dimeric And
Monomeric Tim
pdb|2V2H|A Chain A, The A178l Mutation In The C-Terminal Hinge Of The Flexible
Loop-6 Of Triosephosphate Isomerase (Tim) Induces A More
Closed Conformation Of This Hinge Region In Dimeric And
Monomeric Tim
pdb|2V2H|B Chain B, The A178l Mutation In The C-Terminal Hinge Of The Flexible
Loop-6 Of Triosephosphate Isomerase (Tim) Induces A More
Closed Conformation Of This Hinge Region In Dimeric And
Monomeric Tim
pdb|2V2H|C Chain C, The A178l Mutation In The C-Terminal Hinge Of The Flexible
Loop-6 Of Triosephosphate Isomerase (Tim) Induces A More
Closed Conformation Of This Hinge Region In Dimeric And
Monomeric Tim
Length = 242
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/187 (43%), Positives = 106/187 (56%), Gaps = 12/187 (6%)
Query: 60 NWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLT-DRIEIAAQNSWVG 118
NWK +G+ +S+++L+ N + FV++ K L+ + IAAQN+ G
Sbjct: 11 NWK-SGSPDSLSELIDLFNSTSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNA--G 67
Query: 119 KGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 178
A LKD G W+VLGHSERR GE ++ + K A A++ G VIACIGE
Sbjct: 68 NADALA------SLKDFGVNWIVLGHSERRWYYGETNEIVADKVAAAVASGFMVIACIGE 121
Query: 179 QLQEREAGKTFDVCFQQ--LKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAA 236
LQERE+G+T V Q A W VVIAYEPVWAIGTGKV TP+QAQE HA
Sbjct: 122 TLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVLTPQQAQEAHAL 181
Query: 237 LRDWLKN 243
+R W+ +
Sbjct: 182 IRSWVSS 188
>pdb|2BTM|A Chain A, Does The His12-Lys13 Pair Play A Role In The Adaptation Of
Thermophilic Tims To High Temperatures?
pdb|2BTM|B Chain B, Does The His12-Lys13 Pair Play A Role In The Adaptation Of
Thermophilic Tims To High Temperatures?
Length = 252
Score = 131 bits (329), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 106/197 (53%), Gaps = 6/197 (3%)
Query: 53 NKFFVGGNWKCNGTKESITKLVSDLN-DAKLEXXXXXXXXXXFVYIDQVKNSL--TDRIE 109
K + GNWK NGT + V D+ F+++D++ + TD ++
Sbjct: 1 RKPIIAGNWKMNGTLAEAVQFVEDVKGHVPPADEVISVVCAPFLFLDRLVQAADGTD-LK 59
Query: 110 IAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEG 169
I AQ GA+TGE+S LKD+G +V+LGHSERR + E D+ + KK A + G
Sbjct: 60 IGAQTMHFADQGAYTGEVSPVMLKDLGVTYVILGHSERRQMFAETDETVNKKVLAAFTRG 119
Query: 170 LGVIACIGEQLQEREAGKTFDVCFQQL-KAYADAIPSW-DNVVIAYEPVWAIGTGKVATP 227
L I C GE L+EREAG+T V Q+ KA A P VIAYEP+WAIGTGK +TP
Sbjct: 120 LIPIICCGESLEEREAGQTNAVVASQVEKALAGLTPEQVKQAVIAYEPIWAIGTGKSSTP 179
Query: 228 EQAQEVHAALRDWLKNM 244
E A V +R + +
Sbjct: 180 EDANSVCGHIRSVVSRL 196
>pdb|3M9Y|A Chain A, Crystal Structure Of Triosephosphate Isomerase From
Methicillin Resistant Staphylococcus Aureus At 1.9
Angstrom Resolution
pdb|3M9Y|B Chain B, Crystal Structure Of Triosephosphate Isomerase From
Methicillin Resistant Staphylococcus Aureus At 1.9
Angstrom Resolution
Length = 254
Score = 130 bits (327), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 108/200 (54%), Gaps = 6/200 (3%)
Query: 56 FVGGNWKCNGT----KESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIA 111
+ GNWK N T K+ + L + + ++E VK +EI
Sbjct: 6 IIAGNWKMNKTVQEAKDFVNALPTLPDSKEVESVICAPAIQLDALTTAVKEGKAQGLEIG 65
Query: 112 AQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLG 171
AQN++ GAFTGE S L D+G K+VV+GHSERR + E D+ I KKA G+
Sbjct: 66 AQNTYFEDNGAFTGETSPVALADLGVKYVVIGHSERRELFHETDEEINKKAHAIFKHGMT 125
Query: 172 VIACIGEQLQEREAGKTFDVCFQQLKAYADAIPS--WDNVVIAYEPVWAIGTGKVATPEQ 229
I C+GE +ERE+GK DV +Q+K + +VVIAYEP+WAIGTGK +T E
Sbjct: 126 PIICVGETDEERESGKANDVVGEQVKKAVAGLSEDQLKSVVIAYEPIWAIGTGKSSTSED 185
Query: 230 AQEVHAALRDWLKNMSQQTL 249
A E+ A +R + ++S + +
Sbjct: 186 ANEMCAFVRQTIADLSSKEV 205
>pdb|3UWU|A Chain A, Crystal Structure Of Staphylococcus Aureus Triosephosphate
Isomerase Complexed With Glycerol-3-Phosphate
pdb|3UWU|B Chain B, Crystal Structure Of Staphylococcus Aureus Triosephosphate
Isomerase Complexed With Glycerol-3-Phosphate
pdb|3UWV|A Chain A, Crystal Structure Of Staphylococcus Aureus Triosephosphate
Isomerase Complexed With 2-Phosphoglyceric Acid
pdb|3UWV|B Chain B, Crystal Structure Of Staphylococcus Aureus Triosephosphate
Isomerase Complexed With 2-Phosphoglyceric Acid
pdb|3UWW|A Chain A, Crystal Structure Of Staphylococcus Aureus Triosephosphate
Isomerase Complexed With 3-Phosphoglyceric Acid
pdb|3UWW|B Chain B, Crystal Structure Of Staphylococcus Aureus Triosephosphate
Isomerase Complexed With 3-Phosphoglyceric Acid
pdb|3UWY|A Chain A, Crystal Structure Of Triosephosphate Isomerase From
Methicillin Resistant Staphylococcus Aureus At 2.4
Angstrom Resolution
pdb|3UWY|B Chain B, Crystal Structure Of Triosephosphate Isomerase From
Methicillin Resistant Staphylococcus Aureus At 2.4
Angstrom Resolution
pdb|3UWZ|A Chain A, Crystal Structure Of Staphylococcus Aureus Triosephosphate
Isomerase Complexed With Glycerol-2-Phosphate
pdb|3UWZ|B Chain B, Crystal Structure Of Staphylococcus Aureus Triosephosphate
Isomerase Complexed With Glycerol-2-Phosphate
Length = 261
Score = 130 bits (326), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 108/200 (54%), Gaps = 6/200 (3%)
Query: 56 FVGGNWKCNGT----KESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIA 111
+ GNWK N T K+ + L + + ++E VK +EI
Sbjct: 13 IIAGNWKMNKTVQEAKDFVNALPTLPDSKEVESVICAPAIQLDALTTAVKEGKAQGLEIG 72
Query: 112 AQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLG 171
AQN++ GAFTGE S L D+G K+VV+GHSERR + E D+ I KKA G+
Sbjct: 73 AQNTYFEDNGAFTGETSPVALADLGVKYVVIGHSERRELFHETDEEINKKAHAIFKHGMT 132
Query: 172 VIACIGEQLQEREAGKTFDVCFQQLKAYADAIPS--WDNVVIAYEPVWAIGTGKVATPEQ 229
I C+GE +ERE+GK DV +Q+K + +VVIAYEP+WAIGTGK +T E
Sbjct: 133 PIICVGETDEERESGKANDVVGEQVKKAVAGLSEDQLKSVVIAYEPIWAIGTGKSSTSED 192
Query: 230 AQEVHAALRDWLKNMSQQTL 249
A E+ A +R + ++S + +
Sbjct: 193 ANEMCAFVRQTIADLSSKEV 212
>pdb|1BTM|A Chain A, Triosephosphate Isomerase (Tim) Complexed With 2-
Phosphoglycolic Acid
pdb|1BTM|B Chain B, Triosephosphate Isomerase (Tim) Complexed With 2-
Phosphoglycolic Acid
Length = 252
Score = 126 bits (316), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 105/197 (53%), Gaps = 6/197 (3%)
Query: 53 NKFFVGGNWKCNGTKESITKLVSDLN-DAKLEXXXXXXXXXXFVYIDQVKNSL--TDRIE 109
K + GNWK + T + V D+ F+++D++ + TD ++
Sbjct: 1 RKPIIAGNWKMHKTLAEAVQFVEDVKGHVPPADEVISVVCAPFLFLDRLVQAADGTD-LK 59
Query: 110 IAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEG 169
I AQ GA+TGE+S LKD+G +V+LGHSERR + E D+ + KK A + G
Sbjct: 60 IGAQTMHFADQGAYTGEVSPVMLKDLGVTYVILGHSERRQMFAETDETVNKKVLAAFTRG 119
Query: 170 LGVIACIGEQLQEREAGKTFDVCFQQL-KAYADAIPSW-DNVVIAYEPVWAIGTGKVATP 227
L I C GE L+EREAG+T V Q+ KA A P VIAYEP+WAIGTGK +TP
Sbjct: 120 LIPIICCGESLEEREAGQTNAVVASQVEKALAGLTPEQVKQAVIAYEPIWAIGTGKSSTP 179
Query: 228 EQAQEVHAALRDWLKNM 244
E A V +R + +
Sbjct: 180 EDANSVCGHIRSVVSRL 196
>pdb|3KXQ|A Chain A, Crystal Structure Of Triosephosphate Isomerase From
Bartonella Henselae At 1.6a Resolution
pdb|3KXQ|B Chain B, Crystal Structure Of Triosephosphate Isomerase From
Bartonella Henselae At 1.6a Resolution
Length = 275
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 95/189 (50%), Gaps = 15/189 (7%)
Query: 56 FVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDR-------- 107
F+ GNWK NGT ES+ +L + + F + V +L R
Sbjct: 29 FIAGNWKMNGTGESLGELRA------IAAGISSDLGRLFEALICVPATLLSRAFDILGGE 82
Query: 108 -IEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYAL 166
I + QN G +TG+IS LK+ G V++GHSERR V E D + K A
Sbjct: 83 NILLGGQNCHFDDYGPYTGDISAFMLKEAGASHVIIGHSERRTVYQESDAIVRAKVQAAW 142
Query: 167 SEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVAT 226
GL + C+GE L+ER++ K DV +QL+ + +N++IAYEPVWA+GTG AT
Sbjct: 143 RAGLVALICVGETLEERKSNKVLDVLTRQLEGSLPDGATAENIIIAYEPVWAVGTGNTAT 202
Query: 227 PEQAQEVHA 235
EVHA
Sbjct: 203 SADVAEVHA 211
>pdb|4G1K|A Chain A, Crystal Structure Of Triosephosphate Isomerase From
Burkholderia Thailandensis
pdb|4G1K|B Chain B, Crystal Structure Of Triosephosphate Isomerase From
Burkholderia Thailandensis
pdb|4G1K|C Chain C, Crystal Structure Of Triosephosphate Isomerase From
Burkholderia Thailandensis
pdb|4G1K|D Chain D, Crystal Structure Of Triosephosphate Isomerase From
Burkholderia Thailandensis
Length = 272
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 104/189 (55%), Gaps = 7/189 (3%)
Query: 59 GNWKCNGTKESITKLVSDLNDAK--LEXXXXXXXXXXFVYIDQVKNSLTD-RIEIAAQNS 115
GNWK +G L++++ + F Y+ Q + L R+ +Q+
Sbjct: 32 GNWKMHGRLSGNQALLTEVAQGAQAVHDNVAIGVCVPFPYLAQAQAQLQGGRVSWGSQDV 91
Query: 116 WVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIAC 175
+ GA+TGE++ + + G + ++GHSERR GE ++ + KA AL+ GL I C
Sbjct: 92 SAHEQGAYTGEVAAGMVAEFGAAYAIVGHSERRAYHGESNETVAAKARRALAAGLTPIVC 151
Query: 176 IGEQLQEREAGKTFDVCFQQLKAYADAIPSWD---NVVIAYEPVWAIGTGKVATPEQAQE 232
+GE L EREAG T V QL A A+ S D +V+AYEPVWAIGTGK AT EQAQ+
Sbjct: 152 VGETLAEREAGTTEQVVGAQLDAVL-AVLSPDEAARIVVAYEPVWAIGTGKSATAEQAQQ 210
Query: 233 VHAALRDWL 241
VHA LR L
Sbjct: 211 VHAFLRGRL 219
>pdb|3GVG|A Chain A, Crystal Structure Of Triosephosphate Isomerase From
Mycobacterium Tuberculosis
pdb|3GVG|B Chain B, Crystal Structure Of Triosephosphate Isomerase From
Mycobacterium Tuberculosis
Length = 283
Score = 107 bits (266), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 81/206 (39%), Positives = 108/206 (52%), Gaps = 12/206 (5%)
Query: 54 KFFVGGNWKCN-GTKESIT---KLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTD--- 106
K + GNWK N E+I K+ L D K F + V+ +L D
Sbjct: 26 KPLIAGNWKMNLNHYEAIALVQKIAFSLPD-KYYDRVDVAVIPPFTDLRSVQ-TLVDGDK 83
Query: 107 -RIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYA 165
R+ AQ+ GA+TG++S L +GC +VV+GHSERR EDD + KAA A
Sbjct: 84 LRLTYGAQDLSPHDSGAYTGDVSGAFLAKLGCSYVVVGHSERRTYHNEDDALVAAKAATA 143
Query: 166 LSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPS--WDNVVIAYEPVWAIGTGK 223
L GL I CIGE L REAG +QL+ + + +VVIAYEPVWAIGTG+
Sbjct: 144 LKHGLTPIVCIGEHLDVREAGNHVAHNIEQLRGSLAGLLAEQIGSVVIAYEPVWAIGTGR 203
Query: 224 VATPEQAQEVHAALRDWLKNMSQQTL 249
VA+ AQEV AA+R L +++ +
Sbjct: 204 VASAADAQEVCAAIRKELASLASPRI 229
>pdb|3TA6|A Chain A, Structure Of Mycobacterium Tuberculosis Triosephosphate
Isomerase
pdb|3TA6|B Chain B, Structure Of Mycobacterium Tuberculosis Triosephosphate
Isomerase
pdb|3TAO|A Chain A, Structure Of Mycobacterium Tuberculosis Triosephosphate
Isomerase Bound To Phosphoglycolohydroxamate
pdb|3TAO|B Chain B, Structure Of Mycobacterium Tuberculosis Triosephosphate
Isomerase Bound To Phosphoglycolohydroxamate
Length = 267
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/206 (39%), Positives = 108/206 (52%), Gaps = 12/206 (5%)
Query: 54 KFFVGGNWKCN-GTKESIT---KLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTD--- 106
K + GNWK N E+I K+ L D K F + V+ +L D
Sbjct: 4 KPLIAGNWKMNLNHYEAIALVQKIAFSLPD-KYYDRVDVAVIPPFTDLRSVQ-TLVDGDK 61
Query: 107 -RIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYA 165
R+ AQ+ GA+TG++S L +GC +VV+GHSERR EDD + KAA A
Sbjct: 62 LRLTYGAQDLSPHDSGAYTGDVSGAFLAKLGCSYVVVGHSERRTYHNEDDALVAAKAATA 121
Query: 166 LSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPS--WDNVVIAYEPVWAIGTGK 223
L GL I CIGE L REAG +QL+ + + +VVIAYEPVWAIGTG+
Sbjct: 122 LKHGLTPIVCIGEHLDVREAGNHVAHNIEQLRGSLAGLLAEQIGSVVIAYEPVWAIGTGR 181
Query: 224 VATPEQAQEVHAALRDWLKNMSQQTL 249
VA+ AQEV AA+R L +++ +
Sbjct: 182 VASAADAQEVCAAIRKELASLASPRI 207
>pdb|2JGQ|A Chain A, Kinetics And Structural Properties Of Triosephosphate
Isomerase From Helicobacter Pylori
pdb|2JGQ|B Chain B, Kinetics And Structural Properties Of Triosephosphate
Isomerase From Helicobacter Pylori
Length = 233
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 88/162 (54%), Gaps = 11/162 (6%)
Query: 94 FVYID---QVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHV 150
FV+ D + NS + QN++ GAFTGEI+ + L+++ +++GHSERR +
Sbjct: 37 FVFPDFFGLLPNSFL-HFTLGVQNAYPRDCGAFTGEITSKHLEELKIHTLLIGHSERRTL 95
Query: 151 IGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIP-SWDNV 209
+ E F+ +K + S+ ++ CIGE+L RE G F + L + I ++ N+
Sbjct: 96 LKESPSFLKEKFDFFKSKNFKIVYCIGEELTTREKG--FKAVKEFLSEQLENIDLNYPNL 153
Query: 210 VIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNMSQQTLPL 251
V+AYEP+WAIGT K A+ E H +LK + Q PL
Sbjct: 154 VVAYEPIWAIGTKKSASLEDIYLTHG----FLKQILNQKTPL 191
>pdb|3S6D|A Chain A, Crystal Structure Of A Putative Triosephosphate Isomerase
From Coccidioides Immitis
Length = 310
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 76/143 (53%), Gaps = 5/143 (3%)
Query: 110 IAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEG 169
+ AQ+ + G +TGEIS L+D+ V LGH+ERR + GE DQ + +KAA A +G
Sbjct: 114 LGAQDCFWDSLGPYTGEISPVCLRDMNVSIVELGHAERRAIFGETDQQVARKAAAAADQG 173
Query: 170 LGVIACIGE-----QLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKV 224
L + CIGE + G+ C Q++ +A+P V+ AYEPVWAIG +
Sbjct: 174 LIPLVCIGEVSTLGPIVSEAIGRAVGECEAQIRPVLEALPRDAPVIFAYEPVWAIGKPQP 233
Query: 225 ATPEQAQEVHAALRDWLKNMSQQ 247
A + V + +R ++ + +
Sbjct: 234 ARVDHVGAVVSGIRSVIERIDRH 256
>pdb|2H6R|A Chain A, Crystal Structure Of Triosephosphate Isomerase (Tim) From
Methanocaldococcus Jannaschii
pdb|2H6R|B Chain B, Crystal Structure Of Triosephosphate Isomerase (Tim) From
Methanocaldococcus Jannaschii
pdb|2H6R|C Chain C, Crystal Structure Of Triosephosphate Isomerase (Tim) From
Methanocaldococcus Jannaschii
pdb|2H6R|D Chain D, Crystal Structure Of Triosephosphate Isomerase (Tim) From
Methanocaldococcus Jannaschii
pdb|2H6R|E Chain E, Crystal Structure Of Triosephosphate Isomerase (Tim) From
Methanocaldococcus Jannaschii
pdb|2H6R|F Chain F, Crystal Structure Of Triosephosphate Isomerase (Tim) From
Methanocaldococcus Jannaschii
pdb|2H6R|G Chain G, Crystal Structure Of Triosephosphate Isomerase (Tim) From
Methanocaldococcus Jannaschii
pdb|2H6R|H Chain H, Crystal Structure Of Triosephosphate Isomerase (Tim) From
Methanocaldococcus Jannaschii
Length = 219
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 53/127 (41%), Gaps = 25/127 (19%)
Query: 121 GAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQL 180
G+ TG I E +KD GCK ++ HSE+R ++ + + I K + GL I C
Sbjct: 67 GSHTGHILAEAIKDCGCKGTLINHSEKRMLLADIEAVINK----CKNLGLETIVCTNN-- 120
Query: 181 QEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTG---KVATPEQAQEVHAAL 237
KA A P IA EP IGTG A PE + A+
Sbjct: 121 ------------INTSKAVAALSPDC----IAVEPPELIGTGIPVSKANPEVVEGTVRAV 164
Query: 238 RDWLKNM 244
++ K++
Sbjct: 165 KEINKDV 171
>pdb|1W0M|A Chain A, Triosephosphate Isomerase From Thermoproteus Tenax
pdb|1W0M|B Chain B, Triosephosphate Isomerase From Thermoproteus Tenax
pdb|1W0M|C Chain C, Triosephosphate Isomerase From Thermoproteus Tenax
pdb|1W0M|D Chain D, Triosephosphate Isomerase From Thermoproteus Tenax
pdb|1W0M|E Chain E, Triosephosphate Isomerase From Thermoproteus Tenax
pdb|1W0M|F Chain F, Triosephosphate Isomerase From Thermoproteus Tenax
pdb|1W0M|G Chain G, Triosephosphate Isomerase From Thermoproteus Tenax
pdb|1W0M|H Chain H, Triosephosphate Isomerase From Thermoproteus Tenax
Length = 226
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 108 IEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALS 167
I + AQ + V GGA T +S+E +K+ G V+L HSE + + + + K A S
Sbjct: 57 IPVYAQGADVEAGGAHTAHVSLENIKEAGGSGVILNHSEAPLKLNDLARLVAK----AKS 112
Query: 168 EGLGVIAC 175
GL V+ C
Sbjct: 113 LGLDVVVC 120
>pdb|3ABA|A Chain A, Crystal Structure Of Cyp105p1 In Complex With Filipin I
Length = 403
Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 10/94 (10%)
Query: 121 GAFTGEISVEQLKDIGCKWVVLGHSERRHVIGED---------DQF-IGKKAAYALSEGL 170
G F GE + ++G + G HV+ D ++F I ++ A L+ G
Sbjct: 284 GQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDITRRPAPHLAFGF 343
Query: 171 GVIACIGEQLQEREAGKTFDVCFQQLKAYADAIP 204
G CIG+QL E F+ F++L A P
Sbjct: 344 GAHQCIGQQLARIELQIVFETLFRRLPGLRLAKP 377
>pdb|3E5J|A Chain A, Crystal Structure Of Cyp105p1 Wild-type Ligand-free Form
pdb|3E5K|A Chain A, Crystal Structure Of Cyp105p1 Wild-Type 4-Phenylimidazole
Complex
Length = 403
Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 10/94 (10%)
Query: 121 GAFTGEISVEQLKDIGCKWVVLGHSERRHVIGED---------DQF-IGKKAAYALSEGL 170
G F GE + ++G + G HV+ D ++F I ++ A L+ G
Sbjct: 284 GQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDITRRPAPHLAFGF 343
Query: 171 GVIACIGEQLQEREAGKTFDVCFQQLKAYADAIP 204
G CIG+QL E F+ F++L A P
Sbjct: 344 GAHQCIGQQLARIELQIVFETLFRRLPGLRLAKP 377
>pdb|3E5L|A Chain A, Crystal Structure Of Cyp105p1 H72a Mutant
Length = 403
Score = 32.3 bits (72), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 10/94 (10%)
Query: 121 GAFTGEISVEQLKDIGCKWVVLGHSERRHVIGED---------DQF-IGKKAAYALSEGL 170
G F GE + ++G + G HV+ D ++F I ++ A L+ G
Sbjct: 284 GQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDITRRPAPHLAFGF 343
Query: 171 GVIACIGEQLQEREAGKTFDVCFQQLKAYADAIP 204
G CIG+QL E F+ F++L A P
Sbjct: 344 GAHQCIGQQLARIELQIVFETLFRRLPGLRLAKP 377
>pdb|1HG3|A Chain A, Crystal Structure Of Tetrameric Tim From Pyrococcus
Woesei.
pdb|1HG3|B Chain B, Crystal Structure Of Tetrameric Tim From Pyrococcus
Woesei.
pdb|1HG3|C Chain C, Crystal Structure Of Tetrameric Tim From Pyrococcus
Woesei.
pdb|1HG3|D Chain D, Crystal Structure Of Tetrameric Tim From Pyrococcus
Woesei.
pdb|1HG3|E Chain E, Crystal Structure Of Tetrameric Tim From Pyrococcus
Woesei.
pdb|1HG3|F Chain F, Crystal Structure Of Tetrameric Tim From Pyrococcus
Woesei.
pdb|1HG3|G Chain G, Crystal Structure Of Tetrameric Tim From Pyrococcus
Woesei.
pdb|1HG3|H Chain H, Crystal Structure Of Tetrameric Tim From Pyrococcus Woesei
Length = 225
Score = 32.0 bits (71), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 46/115 (40%), Gaps = 22/115 (19%)
Query: 108 IEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALS 167
I + AQ+ K G+ TG + E +K+ G +L HSE R ++ + + I +
Sbjct: 60 IPVFAQHIDPIKPGSHTGHVLPEAVKEAGAVGTLLNHSENRMILADLEAAIRRA------ 113
Query: 168 EGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTG 222
E G VC A + A+ + + +A EP IGTG
Sbjct: 114 ---------------EEVGLMTMVCSNN-PAVSAAVAALNPDYVAVEPPELIGTG 152
>pdb|2Z36|A Chain A, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
pdb|2Z36|B Chain B, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
Length = 413
Score = 31.2 bits (69), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 25/50 (50%)
Query: 158 IGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWD 207
+ + A + L+ G G C+G+ L E FD F+++ + A+P D
Sbjct: 339 VERGARHHLAFGFGPHQCLGQNLARMELQIVFDTLFRRIPSLRLAVPMED 388
>pdb|1PWX|A Chain A, Crystal Structure Of The Haloalcohol Dehalogenase Hhec
Complexed With Bromide
pdb|1PWX|B Chain B, Crystal Structure Of The Haloalcohol Dehalogenase Hhec
Complexed With Bromide
pdb|1PWX|C Chain C, Crystal Structure Of The Haloalcohol Dehalogenase Hhec
Complexed With Bromide
pdb|1PWX|D Chain D, Crystal Structure Of The Haloalcohol Dehalogenase Hhec
Complexed With Bromide
pdb|1PWZ|A Chain A, Crystal Structure Of The Haloalcohol Dehalogenase Hhec
Complexed With (R)-Styrene Oxide And Chloride
pdb|1PWZ|B Chain B, Crystal Structure Of The Haloalcohol Dehalogenase Hhec
Complexed With (R)-Styrene Oxide And Chloride
pdb|1PX0|A Chain A, Crystal Structure Of The Haloalcohol Dehalogenase Hhec
Complexed With The Haloalcohol Mimic (R)-1-Para-Nitro-
Phenyl-2-Azido-Ethanol
pdb|1PX0|B Chain B, Crystal Structure Of The Haloalcohol Dehalogenase Hhec
Complexed With The Haloalcohol Mimic (R)-1-Para-Nitro-
Phenyl-2-Azido-Ethanol
pdb|1PX0|C Chain C, Crystal Structure Of The Haloalcohol Dehalogenase Hhec
Complexed With The Haloalcohol Mimic (R)-1-Para-Nitro-
Phenyl-2-Azido-Ethanol
pdb|1PX0|D Chain D, Crystal Structure Of The Haloalcohol Dehalogenase Hhec
Complexed With The Haloalcohol Mimic (R)-1-Para-Nitro-
Phenyl-2-Azido-Ethanol
pdb|1ZMT|A Chain A, Structure Of Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With
(R)-Para-Nitro Styrene Oxide, With A Water Molecule In
The Halide-Binding Site
pdb|1ZMT|B Chain B, Structure Of Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With
(R)-Para-Nitro Styrene Oxide, With A Water Molecule In
The Halide-Binding Site
pdb|1ZMT|C Chain C, Structure Of Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With
(R)-Para-Nitro Styrene Oxide, With A Water Molecule In
The Halide-Binding Site
pdb|1ZMT|D Chain D, Structure Of Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With
(R)-Para-Nitro Styrene Oxide, With A Water Molecule In
The Halide-Binding Site
pdb|1ZO8|A Chain A, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|B Chain B, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|C Chain C, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|D Chain D, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|E Chain E, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|F Chain F, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|G Chain G, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|H Chain H, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|I Chain I, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|J Chain J, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|K Chain K, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|L Chain L, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|M Chain M, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|N Chain N, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|O Chain O, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|P Chain P, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
Length = 254
Score = 27.7 bits (60), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 150 VIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPS--WD 207
++ F G +A LSE +AC E ++++ + F + QLK ++ P+ +
Sbjct: 5 IVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIE 64
Query: 208 NVVIAYEPVWAIGTGKVATPE 228
V AY V + + + PE
Sbjct: 65 AVTSAYGQVDVLVSNDIFAPE 85
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.131 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,730,847
Number of Sequences: 62578
Number of extensions: 250966
Number of successful extensions: 1088
Number of sequences better than 100.0: 92
Number of HSP's better than 100.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 905
Number of HSP's gapped (non-prelim): 94
length of query: 260
length of database: 14,973,337
effective HSP length: 97
effective length of query: 163
effective length of database: 8,903,271
effective search space: 1451233173
effective search space used: 1451233173
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 50 (23.9 bits)