Query 024925
Match_columns 260
No_of_seqs 136 out of 1209
Neff 5.3
Searched_HMMs 29240
Date Mon Mar 25 16:50:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024925.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024925hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2vxn_A Triosephosphate isomera 100.0 1E-77 3.5E-82 543.0 22.4 210 49-259 1-213 (251)
2 4g1k_A Triosephosphate isomera 100.0 1.8E-77 6.3E-82 546.4 22.5 212 44-259 17-233 (272)
3 1r2r_A TIM, triosephosphate is 100.0 3.2E-77 1.1E-81 539.0 23.0 209 51-259 2-210 (248)
4 1ney_A TIM, triosephosphate is 100.0 3.3E-77 1.1E-81 538.5 23.0 208 52-259 1-209 (247)
5 1o5x_A TIM, triosephosphate is 100.0 3.2E-77 1.1E-81 539.0 22.7 208 52-259 2-210 (248)
6 3th6_A Triosephosphate isomera 100.0 3.5E-77 1.2E-81 539.0 22.1 208 52-259 3-210 (249)
7 3krs_A Triosephosphate isomera 100.0 4.1E-77 1.4E-81 543.9 22.7 214 43-259 16-233 (271)
8 3qst_A Triosephosphate isomera 100.0 5.5E-77 1.9E-81 539.4 22.7 208 52-259 4-214 (255)
9 3ta6_A Triosephosphate isomera 100.0 2.7E-77 9.2E-82 544.3 20.8 208 52-259 2-217 (267)
10 2j27_A Triosephosphate isomera 100.0 3.9E-77 1.3E-81 539.0 21.5 208 51-259 2-212 (250)
11 1mo0_A TIM, triosephosphate is 100.0 6.7E-77 2.3E-81 543.3 23.2 212 48-259 18-229 (275)
12 1yya_A Triosephosphate isomera 100.0 5.6E-77 1.9E-81 538.0 22.3 208 52-259 1-211 (250)
13 3kxq_A Triosephosphate isomera 100.0 2.1E-77 7.2E-82 546.6 19.7 216 42-259 15-234 (275)
14 2i9e_A Triosephosphate isomera 100.0 8.8E-77 3E-81 538.9 23.1 208 52-259 2-209 (259)
15 1b9b_A TIM, protein (triosepho 100.0 6.5E-77 2.2E-81 538.7 21.8 208 52-259 2-213 (255)
16 3m9y_A Triosephosphate isomera 100.0 4.3E-77 1.5E-81 539.8 19.0 207 52-259 2-215 (254)
17 1tre_A Triosephosphate isomera 100.0 7.3E-77 2.5E-81 538.5 20.1 207 52-259 1-211 (255)
18 2yc6_A Triosephosphate isomera 100.0 1.6E-76 5.6E-81 536.7 19.9 208 52-259 3-215 (257)
19 1aw2_A Triosephosphate isomera 100.0 2.7E-76 9.3E-81 535.1 20.3 207 52-259 1-213 (256)
20 2btm_A TIM, protein (triosepho 100.0 3.5E-76 1.2E-80 533.3 20.4 207 53-259 1-211 (252)
21 1m6j_A TIM, TPI, triosephospha 100.0 2.3E-76 7.8E-81 536.9 19.2 207 52-259 3-219 (261)
22 3s6d_A Putative triosephosphat 100.0 2.4E-73 8.1E-78 526.4 19.0 207 52-259 34-267 (310)
23 2v5b_A Triosephosphate isomera 100.0 6.2E-72 2.1E-76 503.5 16.4 203 49-259 1-206 (244)
24 2jgq_A Triosephosphate isomera 100.0 2E-71 6.9E-76 497.2 15.7 183 54-242 1-186 (233)
25 1hg3_A Triosephosphate isomera 100.0 4.8E-53 1.7E-57 376.4 16.4 178 49-259 1-183 (225)
26 1w0m_A TIM, triosephosphate is 100.0 2.8E-52 9.5E-57 371.8 14.9 175 52-259 1-180 (226)
27 2h6r_A Triosephosphate isomera 100.0 1.9E-40 6.4E-45 292.2 13.7 161 56-240 2-167 (219)
28 2p10_A MLL9387 protein; putati 98.9 3E-09 1E-13 97.4 10.4 115 106-245 93-225 (286)
29 1i4n_A Indole-3-glycerol phosp 94.7 0.43 1.5E-05 42.5 12.4 112 53-181 39-162 (251)
30 1wv2_A Thiazole moeity, thiazo 87.8 1.9 6.4E-05 39.0 8.3 97 117-234 78-183 (265)
31 3tha_A Tryptophan synthase alp 83.6 2.5 8.4E-05 37.7 6.9 50 126-183 106-156 (252)
32 3nav_A Tryptophan synthase alp 76.5 13 0.00044 33.1 9.2 89 126-240 115-206 (271)
33 3igs_A N-acetylmannosamine-6-p 75.6 24 0.00081 30.4 10.4 100 67-179 35-139 (232)
34 3tsm_A IGPS, indole-3-glycerol 73.6 8 0.00027 34.6 7.1 81 86-181 96-181 (272)
35 2htm_A Thiazole biosynthesis p 72.4 7.3 0.00025 35.2 6.5 96 117-233 68-171 (268)
36 3q58_A N-acetylmannosamine-6-p 72.1 32 0.0011 29.5 10.4 100 68-180 36-140 (229)
37 3vnd_A TSA, tryptophan synthas 70.8 15 0.00051 32.6 8.2 50 126-183 113-163 (267)
38 3txv_A Probable tagatose 6-pho 68.8 34 0.0012 33.0 10.6 117 121-243 61-213 (450)
39 1ece_A Endocellulase E1; glyco 68.7 60 0.0021 28.4 13.4 20 158-177 97-116 (358)
40 4h41_A Putative alpha-L-fucosi 67.6 21 0.00072 32.9 8.7 87 129-215 60-166 (340)
41 2hk0_A D-psicose 3-epimerase; 64.9 24 0.00081 30.4 8.1 30 208-237 164-193 (309)
42 4hty_A Cellulase; (alpha/beta) 61.4 29 0.00099 31.2 8.3 116 129-245 91-220 (359)
43 3kws_A Putative sugar isomeras 61.3 51 0.0018 27.8 9.5 58 53-114 25-84 (287)
44 2zvr_A Uncharacterized protein 61.2 35 0.0012 28.9 8.4 78 156-237 113-192 (290)
45 3hh8_A Metal ABC transporter s 60.5 13 0.00044 33.1 5.7 48 192-239 168-230 (294)
46 3ngf_A AP endonuclease, family 59.9 16 0.00055 30.8 6.0 80 156-237 93-175 (269)
47 1vc4_A Indole-3-glycerol phosp 58.6 33 0.0011 29.9 7.9 74 92-181 93-166 (254)
48 1hjs_A Beta-1,4-galactanase; 4 58.1 1E+02 0.0036 27.6 11.5 48 128-176 32-80 (332)
49 3cqj_A L-ribulose-5-phosphate 57.1 16 0.00053 31.2 5.4 19 158-176 110-128 (295)
50 3civ_A Endo-beta-1,4-mannanase 57.1 17 0.00059 33.1 6.0 54 120-174 47-115 (343)
51 1pii_A N-(5'phosphoribosyl)ant 56.8 1.1E+02 0.0037 29.3 11.7 77 90-181 93-169 (452)
52 1zlp_A PSR132, petal death pro 56.3 32 0.0011 31.4 7.7 61 84-150 201-264 (318)
53 2qw5_A Xylose isomerase-like T 56.0 15 0.00053 32.1 5.3 19 157-175 110-128 (335)
54 3mfq_A TROA, high-affinity zin 55.8 17 0.00058 32.1 5.6 50 191-240 147-211 (282)
55 2re2_A Uncharacterized protein 55.0 8.1 0.00028 30.6 3.0 44 125-181 68-111 (136)
56 3tfx_A Orotidine 5'-phosphate 54.2 69 0.0024 28.2 9.3 77 84-167 156-237 (259)
57 3tva_A Xylose isomerase domain 54.1 31 0.0011 29.1 6.9 56 57-116 13-73 (290)
58 3ujp_A Mn transporter subunit; 54.1 20 0.00069 32.2 5.9 50 191-240 174-238 (307)
59 1qtw_A Endonuclease IV; DNA re 53.4 31 0.001 28.9 6.6 30 208-237 139-168 (285)
60 1r30_A Biotin synthase; SAM ra 53.1 1.2E+02 0.004 27.2 10.9 114 119-243 153-279 (369)
61 2w61_A GAS2P, glycolipid-ancho 52.6 80 0.0027 30.9 10.3 107 129-244 93-204 (555)
62 3dx5_A Uncharacterized protein 52.2 43 0.0015 28.1 7.4 77 156-236 84-161 (286)
63 1tqj_A Ribulose-phosphate 3-ep 51.6 40 0.0014 28.7 7.1 43 128-176 77-119 (230)
64 2q02_A Putative cytoplasmic pr 51.2 56 0.0019 27.0 7.9 72 158-236 87-160 (272)
65 1k77_A EC1530, hypothetical pr 50.1 27 0.00094 28.8 5.7 80 156-236 85-167 (260)
66 2qiw_A PEP phosphonomutase; st 49.6 61 0.0021 28.4 8.1 56 84-145 180-238 (255)
67 3aal_A Probable endonuclease 4 49.4 44 0.0015 28.6 7.1 78 156-237 94-172 (303)
68 1xg4_A Probable methylisocitra 47.4 40 0.0014 30.3 6.7 61 84-150 179-242 (295)
69 1toa_A Tromp-1, protein (perip 46.4 34 0.0012 30.6 6.1 50 191-240 181-245 (313)
70 1i60_A IOLI protein; beta barr 46.2 42 0.0014 27.8 6.3 80 156-237 84-164 (278)
71 2g0w_A LMO2234 protein; putati 46.1 1.4E+02 0.0047 25.4 11.6 69 156-237 105-174 (296)
72 2x7v_A Probable endonuclease 4 45.8 52 0.0018 27.5 6.9 20 57-76 4-23 (287)
73 2qul_A D-tagatose 3-epimerase; 45.8 34 0.0011 28.7 5.7 29 208-236 146-174 (290)
74 1eo1_A Hypothetical protein MT 45.4 21 0.0007 27.3 3.9 44 124-180 53-97 (124)
75 3u0h_A Xylose isomerase domain 45.4 12 0.00042 31.3 2.8 76 158-236 86-168 (281)
76 1fob_A Beta-1,4-galactanase; B 45.3 33 0.0011 30.9 5.8 48 128-176 32-80 (334)
77 3ohe_A Histidine triad (HIT) p 42.8 25 0.00086 27.8 4.1 30 215-244 107-136 (137)
78 1xvl_A Mn transporter, MNTC pr 41.8 43 0.0015 30.1 6.0 50 191-240 188-252 (321)
79 1h1y_A D-ribulose-5-phosphate 41.5 1.2E+02 0.0041 25.2 8.5 88 129-241 80-171 (228)
80 1rdu_A Conserved hypothetical 41.3 25 0.00087 26.4 3.8 45 124-180 50-94 (116)
81 3gi1_A LBP, laminin-binding pr 40.5 57 0.002 28.7 6.5 47 192-240 166-227 (286)
82 2whl_A Beta-mannanase, baman5; 39.0 70 0.0024 27.5 6.8 52 128-179 36-87 (294)
83 3ndz_A Endoglucanase D; cellot 38.2 1.6E+02 0.0055 26.1 9.3 58 122-179 41-106 (345)
84 3icg_A Endoglucanase D; cellul 37.4 1.9E+02 0.0063 27.3 10.0 58 122-179 44-109 (515)
85 3ovp_A Ribulose-phosphate 3-ep 37.3 65 0.0022 27.5 6.2 87 129-240 80-166 (228)
86 3iix_A Biotin synthetase, puta 36.8 1.6E+02 0.0054 25.6 8.9 153 65-243 84-262 (348)
87 3ih1_A Methylisocitrate lyase; 36.8 83 0.0028 28.5 7.1 61 84-150 187-250 (305)
88 1bqc_A Protein (beta-mannanase 36.1 92 0.0031 26.7 7.1 52 127-178 36-87 (302)
89 3i24_A HIT family hydrolase; s 35.9 31 0.0011 27.8 3.7 32 215-246 107-138 (149)
90 2c0h_A Mannan endo-1,4-beta-ma 35.5 2.1E+02 0.0073 24.5 10.0 48 129-176 51-111 (353)
91 3fn9_A Putative beta-galactosi 35.2 1.8E+02 0.0062 28.9 9.9 97 129-245 324-423 (692)
92 3d3a_A Beta-galactosidase; pro 35.2 52 0.0018 32.6 5.8 49 129-177 43-97 (612)
93 3ru6_A Orotidine 5'-phosphate 34.5 1.9E+02 0.0065 26.1 9.1 77 84-167 170-251 (303)
94 2prs_A High-affinity zinc upta 34.3 74 0.0025 27.7 6.2 48 191-240 160-222 (284)
95 4e8d_A Glycosyl hydrolase, fam 33.7 44 0.0015 33.3 5.0 49 129-177 38-92 (595)
96 1tg7_A Beta-galactosidase; TIM 33.1 44 0.0015 35.1 5.1 45 129-177 42-96 (971)
97 3thd_A Beta-galactosidase; TIM 32.9 56 0.0019 32.8 5.7 50 128-177 45-100 (654)
98 3cny_A Inositol catabolism pro 32.8 23 0.00077 30.0 2.5 21 156-176 90-110 (301)
99 3qja_A IGPS, indole-3-glycerol 32.2 1.2E+02 0.004 26.7 7.2 73 94-181 102-174 (272)
100 3qxb_A Putative xylose isomera 32.0 1.5E+02 0.0053 25.3 7.9 77 157-237 115-200 (316)
101 1geq_A Tryptophan synthase alp 31.4 2.2E+02 0.0076 23.5 14.4 45 126-178 98-142 (248)
102 1nmo_A Hypothetical protein YB 31.1 19 0.00065 31.3 1.7 16 130-145 180-195 (247)
103 2ze3_A DFA0005; organic waste 30.8 91 0.0031 27.7 6.2 57 84-150 180-239 (275)
104 3vni_A Xylose isomerase domain 30.3 2.3E+02 0.0077 23.6 8.5 108 130-237 54-174 (294)
105 1ur4_A Galactanase; hydrolase, 29.4 74 0.0025 29.7 5.6 50 127-176 52-109 (399)
106 3aam_A Endonuclease IV, endoiv 29.1 97 0.0033 25.7 5.9 73 156-236 88-161 (270)
107 1pq4_A Periplasmic binding pro 29.1 98 0.0033 27.2 6.1 47 192-240 177-236 (291)
108 3qc0_A Sugar isomerase; TIM ba 28.9 24 0.00082 29.3 1.9 19 157-175 84-102 (275)
109 1yx1_A Hypothetical protein PA 28.0 66 0.0022 26.8 4.6 16 96-111 52-68 (264)
110 3i4s_A Histidine triad protein 27.6 55 0.0019 26.3 3.9 29 214-242 111-139 (149)
111 1jfx_A 1,4-beta-N-acetylmurami 27.6 65 0.0022 27.0 4.5 110 122-246 12-132 (217)
112 3obe_A Sugar phosphate isomera 27.6 51 0.0017 28.6 3.9 60 155-217 113-172 (305)
113 2wag_A Lysozyme, putative; hyd 27.6 2.7E+02 0.0093 23.3 10.6 108 122-247 23-139 (220)
114 3qho_A Endoglucanase, 458AA lo 27.0 2.4E+02 0.0082 26.5 8.8 22 156-177 134-155 (458)
115 1olt_A Oxygen-independent copr 26.5 3.8E+02 0.013 24.7 10.2 105 128-243 155-279 (457)
116 3tty_A Beta-GAL, beta-galactos 26.3 52 0.0018 32.7 4.1 48 128-177 28-81 (675)
117 1ep3_A Dihydroorotate dehydrog 25.9 1.2E+02 0.004 26.2 6.0 25 219-243 269-293 (311)
118 1kwg_A Beta-galactosidase; TIM 25.8 50 0.0017 32.3 3.9 46 129-176 20-71 (645)
119 2g0t_A Conserved hypothetical 25.1 1.2E+02 0.0043 27.8 6.2 48 128-178 81-128 (350)
120 3jug_A Beta-mannanase; TIM-bar 25.1 1.5E+02 0.0052 26.8 6.8 52 128-179 59-110 (345)
121 3inp_A D-ribulose-phosphate 3- 25.0 1.2E+02 0.004 26.5 5.8 57 107-177 86-142 (246)
122 1ydn_A Hydroxymethylglutaryl-C 24.9 3.3E+02 0.011 23.4 13.5 158 65-241 23-197 (295)
123 2yx6_A Hypothetical protein PH 24.9 60 0.002 24.4 3.4 42 127-180 54-95 (121)
124 3lmz_A Putative sugar isomeras 24.6 2.9E+02 0.0099 22.6 8.1 85 130-235 68-152 (257)
125 2ftp_A Hydroxymethylglutaryl-C 24.5 3.5E+02 0.012 23.6 8.9 159 64-241 26-201 (302)
126 3kws_A Putative sugar isomeras 24.3 3.1E+02 0.01 22.8 8.5 14 132-145 155-168 (287)
127 3fa4_A 2,3-dimethylmalate lyas 24.0 1.9E+02 0.0065 26.1 7.1 80 84-171 182-263 (302)
128 2x8r_A Glycosyl hydrolase; pep 23.6 57 0.0019 27.2 3.3 110 122-246 11-131 (210)
129 3p6l_A Sugar phosphate isomera 23.2 3.1E+02 0.011 22.4 9.1 19 97-115 65-84 (262)
130 3cu2_A Ribulose-5-phosphate 3- 23.1 2.1E+02 0.0072 24.5 7.0 118 92-242 54-182 (237)
131 2hk0_A D-psicose 3-epimerase; 22.9 2.1E+02 0.0073 24.2 7.1 59 85-145 52-128 (309)
132 3q6z_A Poly [ADP-ribose] polym 22.7 63 0.0021 27.6 3.5 32 210-244 150-183 (214)
133 3f4w_A Putative hexulose 6 pho 22.5 1.4E+02 0.0049 24.0 5.6 92 65-174 10-108 (211)
134 3t7v_A Methylornithine synthas 22.4 2E+02 0.0068 25.3 6.9 107 124-242 147-270 (350)
135 3ve9_A Orotidine-5'-phosphate 22.3 1.4E+02 0.0048 25.3 5.6 81 85-178 128-210 (215)
136 1s2w_A Phosphoenolpyruvate pho 22.3 1.1E+02 0.0038 27.4 5.2 60 84-150 182-245 (295)
137 3pzy_A MOG; ssgcid, seattle st 22.0 1.2E+02 0.004 24.5 4.9 60 126-193 30-89 (164)
138 3eoo_A Methylisocitrate lyase; 21.8 1.9E+02 0.0066 25.9 6.7 64 83-150 182-246 (298)
139 2y8k_A Arabinoxylanase, carboh 21.6 3.8E+02 0.013 25.0 9.0 52 127-178 43-102 (491)
140 3jr2_A Hexulose-6-phosphate sy 21.4 98 0.0034 25.6 4.4 98 65-178 16-119 (218)
141 1xla_A D-xylose isomerase; iso 21.3 34 0.0012 31.1 1.6 19 157-175 117-135 (394)
142 1muw_A Xylose isomerase; atomi 21.2 69 0.0023 28.9 3.6 19 157-175 117-135 (386)
143 4g84_A Histidine--tRNA ligase, 21.0 91 0.0031 28.7 4.5 43 129-180 386-428 (464)
144 1wky_A Endo-beta-1,4-mannanase 20.9 2E+02 0.0069 26.9 6.9 51 128-178 44-94 (464)
145 2ekc_A AQ_1548, tryptophan syn 20.7 4E+02 0.014 22.7 9.6 45 126-178 112-156 (262)
146 2o1e_A YCDH; alpha-beta protei 20.6 1.2E+02 0.0041 27.0 5.0 47 192-240 177-238 (312)
147 1nrp_R Receptor based peptide 20.6 23 0.00078 20.6 0.2 7 212-218 14-20 (26)
148 3fkr_A L-2-keto-3-deoxyarabona 20.6 4.4E+02 0.015 23.2 9.2 67 160-235 94-162 (309)
149 1v95_A Nuclear receptor coacti 20.6 1.3E+02 0.0044 24.0 4.7 44 130-181 29-72 (130)
150 3u7v_A Beta-galactosidase; str 20.4 1.4E+02 0.0047 29.4 5.7 45 129-175 79-128 (552)
151 3cx3_A Lipoprotein; zinc-bindi 20.3 1.8E+02 0.0062 25.2 6.1 47 192-240 164-225 (284)
152 3m6y_A 4-hydroxy-2-oxoglutarat 20.2 4.7E+02 0.016 23.4 8.6 93 129-242 174-272 (275)
153 3lye_A Oxaloacetate acetyl hyd 20.2 2.1E+02 0.0072 25.8 6.6 79 84-171 190-271 (307)
No 1
>2vxn_A Triosephosphate isomerase; fatty acid biosynthesis, transition state analogue, glycolysis, pentose shunt, gluconeogenesis, TIM, glycosome; HET: PGH PGA; 0.82A {Leishmania mexicana} PDB: 1if2_A* 1qds_A 1n55_A* 2y61_A 2y62_A 2y63_A 1amk_A 1tpf_A 1iig_A 1ag1_O* 1iih_A 1tpd_A 1trd_A* 2v5l_A 4tim_A* 5tim_A 6tim_A*
Probab=100.00 E-value=1e-77 Score=543.03 Aligned_cols=210 Identities=50% Similarity=0.799 Sum_probs=198.1
Q ss_pred hhhcCcceEEeecccccCHHHHHHHHHHHhhccccCCceEEEcCCcccHHHHHHHcC-CCceEeeeccccCCCccccccc
Q 024925 49 MASSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEADVDVVVAPPFVYIDQVKNSLT-DRIEIAAQNSWVGKGGAFTGEI 127 (260)
Q Consensus 49 m~~~rk~~IigNWKmn~t~~~~~~l~~~l~~~~~~~~v~VvvaPp~~~L~~v~~~~~-~~i~vgAQnv~~~~~GA~TGEI 127 (260)
|.+||+|||+||||||++.+++.+|++.+.....+.+++|+|||||++|..+.+.+. ++|.+|||||+ .+.|||||||
T Consensus 1 ~~~mr~~~i~gNwKmn~~~~~~~~l~~~l~~~~~~~~vev~v~Pp~~~L~~v~~~~~~~~i~vgAQn~~-~~~GA~TGEi 79 (251)
T 2vxn_A 1 MSAKPQPIAAANWKCNGTTASIEKLVQVFNEHTISHDVQCVVAPTFVHIPLVQAKLRNPKYVISAQNAI-AKSGAFTGEV 79 (251)
T ss_dssp --CCCCCEEEEECCSCCCHHHHHHHHHHHHHSCCCSCCEEEEECCGGGHHHHHHHCCCTTEEEEESCCB-SSCSSCTTCC
T ss_pred CCCCCCCEEEEecccccCHHHHHHHHHHHHhhccccCceEEEECcHHHHHHHHHHhcCCCceEeecccC-CCCCCCcCcC
Confidence 446899999999999999999999999997643335799999999999999999886 78999999999 9999999999
Q ss_pred CHHHHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCChHHHHHHHHHHHHhcCC--C
Q 024925 128 SVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIP--S 205 (260)
Q Consensus 128 Sa~mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pIlCIGE~leere~g~~~~vl~~Ql~~~l~~i~--~ 205 (260)
|++||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++||+|+|.++|.+||++.++.++ +
T Consensus 80 S~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~ 159 (251)
T 2vxn_A 80 SMPILKDIGVHWVILGHSERRTYYGETDEIVAQKVSEACKQGFMVIACIGETLQQREANQTAKVVLSQTSAIAAKLTKDA 159 (251)
T ss_dssp BHHHHHHTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHTTCCTGG
T ss_pred CHHHHHHcCCCEEEECchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhCCCHHHHHHHHHHHHHhcCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999885 5
Q ss_pred CCceEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhhcCCcccceeeecccC
Q 024925 206 WDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNMSQQTLPLKHVLSMEG 259 (260)
Q Consensus 206 ~~~iiIAYEPvWAIGTG~~aspe~iqe~~~~IR~~l~~~~~~~~a~~~~~~~~~ 259 (260)
+++++|||||+||||||++||||+||++|++||++|++.||++++.+..|.|.|
T Consensus 160 ~~~~vIAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGG 213 (251)
T 2vxn_A 160 WNQVVLAYEPVWAIGTGKVATPEQAQEVHLLLRKWVSENIGTDVAAKLRILYGG 213 (251)
T ss_dssp GGGEEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCEEEEES
T ss_pred hCCEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhcChhhcccccEEEcC
Confidence 789999999999999999999999999999999999999999988889999877
No 2
>4g1k_A Triosephosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel, TPIA; 2.35A {Burkholderia thailandensis}
Probab=100.00 E-value=1.8e-77 Score=546.45 Aligned_cols=212 Identities=37% Similarity=0.562 Sum_probs=194.2
Q ss_pred chhhhhhhcCcceEEeecccccCHHHHHHHHHHHhhcc-c-cCCceEEEcCCcccHHHHHHHcC-CCceEeeeccccCCC
Q 024925 44 SSVVAMASSNKFFVGGNWKCNGTKESITKLVSDLNDAK-L-EADVDVVVAPPFVYIDQVKNSLT-DRIEIAAQNSWVGKG 120 (260)
Q Consensus 44 ~~~~~m~~~rk~~IigNWKmn~t~~~~~~l~~~l~~~~-~-~~~v~VvvaPp~~~L~~v~~~~~-~~i~vgAQnv~~~~~ 120 (260)
...-.|..||||||+||||||++.+++.+|++.+.... . ..+++|+|||||++|..+.+.+. ++|.+|||||++.+.
T Consensus 17 ~~~~~~~~Mrk~~i~gNWKMn~t~~~~~~l~~~l~~~~~~~~~~veVvV~PP~~~L~~v~~~~~~~~i~vgAQN~~~~~~ 96 (272)
T 4g1k_A 17 QGPGSMSKQRIKRVIGNWKMHGRLSGNQALLTEVAQGAQAVHDNVAIGVCVPFPYLAQAQAQLQGGRVSWGSQDVSAHEQ 96 (272)
T ss_dssp --------CCCEEEEEECCBCCCHHHHHHHHHHHHHHHTTSCTTEEEEEECCGGGHHHHHHHHTTSSEEEEESCCCSSSS
T ss_pred ccCcHHHhCCCCEEEEEhhhCcCHHHHHHHHHHHHhccccccCCceEEEeCCHHHHHHHHHHhcCCCceEEecccCCCCC
Confidence 44456667899999999999999999999999998754 2 35799999999999999999887 789999999999999
Q ss_pred cccccccCHHHHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCChHHHHHHHHHHHH
Q 024925 121 GAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYA 200 (260)
Q Consensus 121 GA~TGEISa~mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pIlCIGE~leere~g~~~~vl~~Ql~~~l 200 (260)
||||||||++||+|+||+||||||||||.+|+|||+.|++|+++|+++||+||+||||++++||+|+|.++|.+||+.++
T Consensus 97 GAfTGEISa~MLkd~G~~~VIiGHSERR~~fgEtde~V~~K~~~Al~~GL~pIlCVGEtleeReag~t~~vv~~Ql~~~l 176 (272)
T 4g1k_A 97 GAYTGEVAAGMVAEFGAAYAIVGHSERRAYHGESNETVAAKARRALAAGLTPIVCVGETLAEREAGTTEQVVGAQLDAVL 176 (272)
T ss_dssp BSCTTCCCHHHHHTTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCCcCcCCHHHHHHcCCCEEEECchhcccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCC--CCCceEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhhcCCcccceeeecccC
Q 024925 201 DAIP--SWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNMSQQTLPLKHVLSMEG 259 (260)
Q Consensus 201 ~~i~--~~~~iiIAYEPvWAIGTG~~aspe~iqe~~~~IR~~l~~~~~~~~a~~~~~~~~~ 259 (260)
+.++ +|+++|||||||||||||++||||+||++|++||++|++.| |.+..|.|.|
T Consensus 177 ~~~~~~~~~~vVIAYEPVWAIGTG~tAt~e~aqevh~~IR~~l~~~~----a~~~rIlYGG 233 (272)
T 4g1k_A 177 AVLSPDEAARIVVAYEPVWAIGTGKSATAEQAQQVHAFLRGRLAAKG----AGHVSLLYGG 233 (272)
T ss_dssp TTSCHHHHTTCEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHT----CTTSCEEECS
T ss_pred hCCCHHHcCCEEEEECcHhhccCCCCCCHHHHHHHHHHHHHHHHHhh----cCCceEEEcC
Confidence 9887 68899999999999999999999999999999999999999 6677888877
No 3
>1r2r_A TIM, triosephosphate isomerase; closed loop conformation in the ligand-free state, conformational heterogeneity, TIM-barrel; 1.50A {Oryctolagus cuniculus} SCOP: c.1.1.1 PDB: 1r2s_A 1r2t_A 2jk2_A 1wyi_A 1hti_A 2vom_A 1tph_1* 8tim_A 1sw3_A 1spq_A 1tpb_1* 1tpw_A* 1sw7_A 1tpu_A* 1tpc_1* 1ssd_A 1ssg_A 1sw0_A 1sq7_A 1tpv_A* ...
Probab=100.00 E-value=3.2e-77 Score=539.01 Aligned_cols=209 Identities=58% Similarity=0.943 Sum_probs=198.0
Q ss_pred hcCcceEEeecccccCHHHHHHHHHHHhhccccCCceEEEcCCcccHHHHHHHcCCCceEeeeccccCCCcccccccCHH
Q 024925 51 SSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEADVDVVVAPPFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVE 130 (260)
Q Consensus 51 ~~rk~~IigNWKmn~t~~~~~~l~~~l~~~~~~~~v~VvvaPp~~~L~~v~~~~~~~i~vgAQnv~~~~~GA~TGEISa~ 130 (260)
+||+|||+||||||++.+++.+|++.+.....+.+++|+|||||++|..+.+.+...|.+|||||++.+.||||||||++
T Consensus 2 ~mr~~~i~gNwKmn~~~~~~~~l~~~l~~~~~~~~vev~v~Pp~~~L~~v~~~~~~~i~vgAQn~~~~~~GA~TGEiS~~ 81 (248)
T 1r2r_A 2 PSRKFFVGGNWKMNGRKKNLGELITTLNAAKVPADTEVVCAPPTAYIDFARQKLDPKIAVAAQNCYKVTNGAFTGEISPG 81 (248)
T ss_dssp -CCCEEEEEECCBCCCHHHHHHHHHHHHHSCCCTTEEEEEECCGGGHHHHHHHSCTTSEEEESCCCSSSSBSCTTCCCHH
T ss_pred CCCCCEEEEeCCcccCHHHHHHHHHHHHhhccccCceEEEeCcHHHHHHHHHHhhCCceEEeccCCCCCCCCccCccCHH
Confidence 47999999999999999999999999976433357999999999999999998863499999999999999999999999
Q ss_pred HHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCChHHHHHHHHHHHHhcCCCCCceE
Q 024925 131 QLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVV 210 (260)
Q Consensus 131 mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pIlCIGE~leere~g~~~~vl~~Ql~~~l~~i~~~~~ii 210 (260)
||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|++|+|.++|.+||+..+++++++++++
T Consensus 82 mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~~v 161 (248)
T 1r2r_A 82 MIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALSEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVV 161 (248)
T ss_dssp HHHHTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHTCSCGGGEE
T ss_pred HHHHcCCCEEEECChhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhCCChHHHHHHHHHHHHhhhhhhhceE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999887789999
Q ss_pred EEEcccccccCCCCCCHHHHHHHHHHHHHHHHhhcCCcccceeeecccC
Q 024925 211 IAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNMSQQTLPLKHVLSMEG 259 (260)
Q Consensus 211 IAYEPvWAIGTG~~aspe~iqe~~~~IR~~l~~~~~~~~a~~~~~~~~~ 259 (260)
|||||+||||||++||||+||++|++||++|++.||++++.+..|.|.|
T Consensus 162 IAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGG 210 (248)
T 1r2r_A 162 LAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGG 210 (248)
T ss_dssp EEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCCEEECS
T ss_pred EEEecHHhhCCCCCCCHHHHHHHHHHHHHHHHHhcChhhcccccEEEcC
Confidence 9999999999999999999999999999999999999988888898877
No 4
>1ney_A TIM, triosephosphate isomerase; yeast, DHAP, dihydroxyacetone phosphate, michaelis complex; HET: FTR 13P; 1.20A {Saccharomyces cerevisiae} SCOP: c.1.1.1 PDB: 1nf0_A* 1i45_A* 1ypi_A 2ypi_A 7tim_A* 3ypi_A*
Probab=100.00 E-value=3.3e-77 Score=538.54 Aligned_cols=208 Identities=47% Similarity=0.803 Sum_probs=198.2
Q ss_pred cCcceEEeecccccCHHHHHHHHHHHhhccccCCceEEEcCCcccHHHHHHHcC-CCceEeeeccccCCCcccccccCHH
Q 024925 52 SNKFFVGGNWKCNGTKESITKLVSDLNDAKLEADVDVVVAPPFVYIDQVKNSLT-DRIEIAAQNSWVGKGGAFTGEISVE 130 (260)
Q Consensus 52 ~rk~~IigNWKmn~t~~~~~~l~~~l~~~~~~~~v~VvvaPp~~~L~~v~~~~~-~~i~vgAQnv~~~~~GA~TGEISa~ 130 (260)
||+|||+||||||++.+++.+|++.+.....+.+++|+|||||++|..+.+.+. +++.+|||||++.+.||||||||++
T Consensus 1 Mr~~~i~gNwKmn~~~~~~~~~~~~l~~~~~~~~vev~v~Pp~~~L~~v~~~~~~~~i~vgAQn~~~~~~GA~TGEiS~~ 80 (247)
T 1ney_A 1 ARTFFVGGNFKLNGSKQSIKEIVERLNTASIPENVEVVICPPATYLDYSVSLVKKPQVTVGAQNAYLKASGAFTGENSVD 80 (247)
T ss_dssp CCCEEEEEECCBCCCHHHHHHHHHHHHHSCCCTTEEEEEECCGGGHHHHHHHCCCTTEEEEESCCCSSSSBSCTTCCCHH
T ss_pred CCCCEEEEECCcccCHHHHHHHHHHHHhhccccCceEEEeCcHHHHHHHHHHhcCCCceEEeccCCCCCCCCccCccCHH
Confidence 589999999999999999999999997643335799999999999999999886 7899999999999999999999999
Q ss_pred HHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCChHHHHHHHHHHHHhcCCCCCceE
Q 024925 131 QLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVV 210 (260)
Q Consensus 131 mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pIlCIGE~leere~g~~~~vl~~Ql~~~l~~i~~~~~ii 210 (260)
||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++||+|+|.++|.+||+..+++++++++++
T Consensus 81 mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~~v 160 (247)
T 1ney_A 81 QIKDVGAKYVILGHSERRSYFHEDDKFIADKTKFALGQGVGVILCIGETLEEKKAGKTLDVVERQLNAVLEEVKDFTNVV 160 (247)
T ss_dssp HHHHTTCCEEEESCHHHHHTTCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHCCCCTTEE
T ss_pred HHHHcCCCEEEECChhhccccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHHCCCHHHHHHHHHHHHHhchhhhcCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998887789999
Q ss_pred EEEcccccccCCCCCCHHHHHHHHHHHHHHHHhhcCCcccceeeecccC
Q 024925 211 IAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNMSQQTLPLKHVLSMEG 259 (260)
Q Consensus 211 IAYEPvWAIGTG~~aspe~iqe~~~~IR~~l~~~~~~~~a~~~~~~~~~ 259 (260)
|||||+||||||++||||+||++|++||++|+++||++++.+..|.|.|
T Consensus 161 IAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~~~~~~va~~vrIlYGG 209 (247)
T 1ney_A 161 VAYEPVXAIGTGLAATPEDAQDIHASIRKFLASKLGDKAASELRILYGG 209 (247)
T ss_dssp EEECCGGGTTTSCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCCEEEES
T ss_pred EEECChhhcCCCCCCCHHHHHHHHHHHHHHHHHhcChhhcccceEEEcC
Confidence 9999999999999999999999999999999999999988888898877
No 5
>1o5x_A TIM, triosephosphate isomerase; 2- phosphoglycerate, META-phosphate, catalytic LOOP6; HET: 2PG; 1.10A {Plasmodium falciparum} SCOP: c.1.1.1 PDB: 1lzo_A 1m7o_A* 1m7p_A* 1lyx_A* 1ydv_A 2vfi_A* 3psw_A 3psv_A 3pwa_A 2vfh_A* 2vff_A 2vfg_A* 1vga_A 1woa_A* 1wob_A 3pvf_A 3py2_A 2vfd_A 2vfe_A*
Probab=100.00 E-value=3.2e-77 Score=538.97 Aligned_cols=208 Identities=40% Similarity=0.670 Sum_probs=197.2
Q ss_pred cCcceEEeecccccCHHHHHHHHHHHhhcccc-CCceEEEcCCcccHHHHHHHcCCCceEeeeccccCCCcccccccCHH
Q 024925 52 SNKFFVGGNWKCNGTKESITKLVSDLNDAKLE-ADVDVVVAPPFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVE 130 (260)
Q Consensus 52 ~rk~~IigNWKmn~t~~~~~~l~~~l~~~~~~-~~v~VvvaPp~~~L~~v~~~~~~~i~vgAQnv~~~~~GA~TGEISa~ 130 (260)
||+|||+||||||++.+++.+|++.+...... .+++|+|||||++|..+.+.+.++|.+|||||++.+.||||||||++
T Consensus 2 mr~~~i~gNwKmn~~~~~~~~l~~~l~~~~~~~~~vev~v~Pp~~~L~~v~~~~~~~i~vgAQn~~~~~~GA~TGEiS~~ 81 (248)
T 1o5x_A 2 ARKYFVAANWKCNGTLESIKSLTNSFNNLDFDPSKLDVVVFPVSVHYDHTRKLLQSKFSTGIQNVSKFGNGSYTGEVSAE 81 (248)
T ss_dssp -CCEEEEEECCBCCCHHHHHHHHHHHHTSCCCTTTEEEEEECCGGGHHHHHHHSCTTSEEEESCCCSSCSBSCTTCCCHH
T ss_pred CCCCEEEEecCcccCHHHHHHHHHHHHhhcccccCceEEEeCcHHHHHHHHHHhccCCeEEeccCCCCCCCCcCCcCCHH
Confidence 79999999999999999999999999763222 46999999999999999988766799999999999999999999999
Q ss_pred HHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCChHHHHHHHHHHHHhcCCCCCceE
Q 024925 131 QLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVV 210 (260)
Q Consensus 131 mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pIlCIGE~leere~g~~~~vl~~Ql~~~l~~i~~~~~ii 210 (260)
||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++||+|+|.++|.+||+..++.++++++++
T Consensus 82 mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~~v 161 (248)
T 1o5x_A 82 IAKDLNIEYVIIGHFERRKYFHETDEDVREKLQASLKNNLKAVVCFGESLEQREQNKTIEVITKQVKAFVDLIDNFDNVI 161 (248)
T ss_dssp HHHHTTCCEEEECCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHTTGGGCCCTTSEE
T ss_pred HHHHcCCCEEEeCChhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCChHHHHHHHHHHHHhhhhhhcCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999887789999
Q ss_pred EEEcccccccCCCCCCHHHHHHHHHHHHHHHHhhcCCcccceeeecccC
Q 024925 211 IAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNMSQQTLPLKHVLSMEG 259 (260)
Q Consensus 211 IAYEPvWAIGTG~~aspe~iqe~~~~IR~~l~~~~~~~~a~~~~~~~~~ 259 (260)
|||||+||||||++||||+||++|++||++|+++||++++.++.|.|.|
T Consensus 162 IAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGG 210 (248)
T 1o5x_A 162 LVYEPLWAIGTGKTATPEQAQLVHKEIRKIVKDTCGEKQANQIRILYGG 210 (248)
T ss_dssp EEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSEEEECS
T ss_pred EEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhcCccccCcceEEEcC
Confidence 9999999999999999999999999999999999999988889999977
No 6
>3th6_A Triosephosphate isomerase; alpha/beta barrel, embryogenesis, glycolysis; 2.40A {Rhipicephalus microplus}
Probab=100.00 E-value=3.5e-77 Score=539.05 Aligned_cols=208 Identities=51% Similarity=0.884 Sum_probs=196.8
Q ss_pred cCcceEEeecccccCHHHHHHHHHHHhhccccCCceEEEcCCcccHHHHHHHcCCCceEeeeccccCCCcccccccCHHH
Q 024925 52 SNKFFVGGNWKCNGTKESITKLVSDLNDAKLEADVDVVVAPPFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQ 131 (260)
Q Consensus 52 ~rk~~IigNWKmn~t~~~~~~l~~~l~~~~~~~~v~VvvaPp~~~L~~v~~~~~~~i~vgAQnv~~~~~GA~TGEISa~m 131 (260)
+|||||+||||||++.+++.+|++.++......+++|+|||||++|..+.+.+.+++.+|||||++.+.||||||||++|
T Consensus 3 ~r~~~i~gNwKmn~~~~~~~~~~~~l~~~~~~~~vev~v~Pp~~~L~~v~~~~~~~i~vgAQn~~~~~~GA~TGEiS~~m 82 (249)
T 3th6_A 3 ARRFCVGGNWKMHGSKNSIRDICNTLKGASLDPNVEVIVACPAPYLDYCRSLLPPSVALAAQNCYKVEQGAFTGEISPGM 82 (249)
T ss_dssp CCCCEEEEECCBCCCHHHHHHHHHHHHTSCCCTTSEEEEEECGGGHHHHHHHSCTTEEEEESCCCSSSSBSCTTCCCHHH
T ss_pred CCCeEEEEEhhhccCHHHHHHHHHHHHhhcccCCceEEEeCcHHHHHHHHHHhccCCEEEeeecCCccCCCcccccCHHH
Confidence 48999999999999999999999999875444579999999999999999887778999999999999999999999999
Q ss_pred HHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCChHHHHHHHHHHHHhcCCCCCceEE
Q 024925 132 LKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVI 211 (260)
Q Consensus 132 Lkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pIlCIGE~leere~g~~~~vl~~Ql~~~l~~i~~~~~iiI 211 (260)
|+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++||+|+|.+++.+||+..++.++++++++|
T Consensus 83 L~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~~vI 162 (249)
T 3th6_A 83 IKDCGGQWVILGHSERRHVFKEDDVLIGEKIKHALESGLNVIACIGELLEDREAGRTEEVCFRQIKHIASNVKDWSKVVI 162 (249)
T ss_dssp HHHTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHTTTCHHHHHHHHHHHHHTTCSCGGGEEE
T ss_pred HHHcCCCEEEECchhhccccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCCHHHHHHHHHHHHHhchhhhcCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999888899999
Q ss_pred EEcccccccCCCCCCHHHHHHHHHHHHHHHHhhcCCcccceeeecccC
Q 024925 212 AYEPVWAIGTGKVATPEQAQEVHAALRDWLKNMSQQTLPLKHVLSMEG 259 (260)
Q Consensus 212 AYEPvWAIGTG~~aspe~iqe~~~~IR~~l~~~~~~~~a~~~~~~~~~ 259 (260)
||||+||||||++||||++|++|++||++|+++|+++++.+..|.|.|
T Consensus 163 AYEPvWAIGTG~~At~e~aqevh~~IR~~l~~~~~~~~a~~vrIlYGG 210 (249)
T 3th6_A 163 AYEPVWAIGTGKTATPDQAQEVHSKVRNWLSTNVSADVASKVRIQYGG 210 (249)
T ss_dssp EECCTTTCCC---CCHHHHHHHHHHHHHHHHHHTCHHHHHHCCEEECS
T ss_pred EECCcchhcCCCCCCHHHHHHHHHHHHHHHHHhhChhhcccccEEEcC
Confidence 999999999999999999999999999999999999999999999987
No 7
>3krs_A Triosephosphate isomerase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, I structural genomics; 1.55A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=4.1e-77 Score=543.91 Aligned_cols=214 Identities=43% Similarity=0.680 Sum_probs=199.3
Q ss_pred cchhhhhhhcCcceEEeecccccCHHHHHHHHHHHhhccccCCceEEEcCCcccHHHHHHHc----CCCceEeeeccccC
Q 024925 43 SSSVVAMASSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEADVDVVVAPPFVYIDQVKNSL----TDRIEIAAQNSWVG 118 (260)
Q Consensus 43 ~~~~~~m~~~rk~~IigNWKmn~t~~~~~~l~~~l~~~~~~~~v~VvvaPp~~~L~~v~~~~----~~~i~vgAQnv~~~ 118 (260)
+.++.+| +|||||+||||||++.+++.+|++.+.... ..+++|+|||||++|..+.+.+ .++|.+|||||++.
T Consensus 16 ~~~~~~m--~rk~~i~gNWKmn~t~~~~~~l~~~l~~~~-~~~vevvv~Pp~~~L~~v~~~~~~~~~~~i~vgAQn~~~~ 92 (271)
T 3krs_A 16 TQGPGSM--SRKYFVGGNFKCNGTKESLKTLIDSFKQVE-SSNSEVYVFPTSLHISLVKEFFGNDHPGVFKIGSQNISCT 92 (271)
T ss_dssp ---------CCCCEEEEECCBCCCHHHHHHHHHHHTTCC-CCSSEEEEECCGGGHHHHHHHHCSSSCSCEEECBSCCCSS
T ss_pred ccccccc--CCCeEEEEEhhhCcCHHHHHHHHHHHHhcc-cCCceEEEECcHHHHHHHHHHHhhccCCCceEEecccccc
Confidence 4556666 689999999999999999999999998765 5579999999999999999987 36799999999999
Q ss_pred CCcccccccCHHHHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCChHHHHHHHHHH
Q 024925 119 KGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKA 198 (260)
Q Consensus 119 ~~GA~TGEISa~mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pIlCIGE~leere~g~~~~vl~~Ql~~ 198 (260)
+.||||||||++||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++||+|+|.++|.+||+.
T Consensus 93 ~~GAfTGEIS~~mLkd~G~~~ViiGHSERR~~f~Etde~v~~Kv~~Al~~GL~pIlCVGEtleere~g~t~~vv~~Ql~~ 172 (271)
T 3krs_A 93 GNGAFTGEVSCEMLKDMDVDCSLVGHSERRQYYSETDQIVNNKVKKGLENGLKIVLCIGESLSERETGKTNDVIQKQLTE 172 (271)
T ss_dssp CSBSCTTCCCHHHHHHTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHH
T ss_pred cCCCccccccHHHHHHcCCCEEEECchhhccccCCCHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCceEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhhcCCcccceeeecccC
Q 024925 199 YADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNMSQQTLPLKHVLSMEG 259 (260)
Q Consensus 199 ~l~~i~~~~~iiIAYEPvWAIGTG~~aspe~iqe~~~~IR~~l~~~~~~~~a~~~~~~~~~ 259 (260)
+++.+.++++++|||||+||||||++||||++|++|++||++|+++|+++.+.+..|.|.|
T Consensus 173 ~l~~v~~~~~~vIAYEPvWAIGTG~tAtpe~aqevh~~IR~~l~~~~~~~~a~~vrILYGG 233 (271)
T 3krs_A 173 ALKDVSDLSNLVIAYEPIWAIGTGVVATPGQAQEAHAFIREYVTRMYNPQVSSNLRIIYGG 233 (271)
T ss_dssp HTTTCCCCTTEEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHSCHHHHHHCCEEECS
T ss_pred HHhchHhhcCEEEEECChhhhcCCCCCCHHHHHHHHHHHHHHHHHhcChhhcCCccEEEcC
Confidence 9998888999999999999999999999999999999999999999999999999999987
No 8
>3qst_A Triosephosphate isomerase, putative; TIM barrel; 1.75A {Trichomonas vaginalis} PDB: 3qsr_A
Probab=100.00 E-value=5.5e-77 Score=539.37 Aligned_cols=208 Identities=46% Similarity=0.811 Sum_probs=198.4
Q ss_pred cCcceEEeecccc-cCHHHHHHHHHHHhhccccCCceEEEcCCcccHHHHHHHcCCCceEeeeccccCCCcccccccCHH
Q 024925 52 SNKFFVGGNWKCN-GTKESITKLVSDLNDAKLEADVDVVVAPPFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVE 130 (260)
Q Consensus 52 ~rk~~IigNWKmn-~t~~~~~~l~~~l~~~~~~~~v~VvvaPp~~~L~~v~~~~~~~i~vgAQnv~~~~~GA~TGEISa~ 130 (260)
||+|||+|||||| ++.+++.+|++.+.....+.+++|+|||||++|..+.+.+.+++.+|||||++.+.||||||||++
T Consensus 4 mr~~~i~gNWKmn~~~~~~~~~l~~~l~~~~~~~~~ev~v~Pp~~~L~~v~~~~~~~i~vgAQn~~~~~~GA~TGEiS~~ 83 (255)
T 3qst_A 4 MRTFFVGGNWKANPKTVQEAEKLVEMLNGAKVEGNVEVVVAAPFVFLPTLQQKLRKDWKVSAENVFTKPNGAFTGEVTVP 83 (255)
T ss_dssp -CCCEEEEECCSCCSSHHHHHHHHHHHHTCCCCSSCEEEEECCGGGHHHHHHHSCTTSEEEESCCCSSSSSSCTTCCCHH
T ss_pred CCCcEEEEEhhcccCCHHHHHHHHHHHHhhcccCCceEEEeCCHHHHHHHHHHhccCCeEEecccCCCCCCCccCccCHH
Confidence 6899999999999 999999999999987544456999999999999999988767899999999999999999999999
Q ss_pred HHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCChHHHHHHHHHHHHhcCC--CCCc
Q 024925 131 QLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIP--SWDN 208 (260)
Q Consensus 131 mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pIlCIGE~leere~g~~~~vl~~Ql~~~l~~i~--~~~~ 208 (260)
||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++||+|+|.++|.+||++++++++ ++++
T Consensus 84 mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pIlCvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~~~ 163 (255)
T 3qst_A 84 MIKSFGIEWTILGHSERRDILKEDDEFLAAKAKFALENGMKIIYCCGEHLSEREAGKASEFVSAQIEKMIPAIPAGKWDD 163 (255)
T ss_dssp HHHTTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHGGGSCTTCGGG
T ss_pred HHHHcCCCEEEECchhhhhhcCCCHHHHHHHHHHHHHCCCeEEEEcCCcHHHHHcCCHHHHHHHHHHHHHccCCHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999875 6889
Q ss_pred eEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhhcCCcccceeeecccC
Q 024925 209 VVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNMSQQTLPLKHVLSMEG 259 (260)
Q Consensus 209 iiIAYEPvWAIGTG~~aspe~iqe~~~~IR~~l~~~~~~~~a~~~~~~~~~ 259 (260)
++|||||+||||||++||||++|++|++||++|+++|+++.+.+..|.|.|
T Consensus 164 ~vIAYEPvWAIGTG~~Atpe~aqevh~~IR~~l~~~~~~~~a~~vrIlYGG 214 (255)
T 3qst_A 164 VVIAYEPIWAIGTGKVASTQDAQEMCKVIRDILAAKVGADIANKVRILYGG 214 (255)
T ss_dssp EEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCEEEECS
T ss_pred EEEEECCHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcChhhcCcccEEEcC
Confidence 999999999999999999999999999999999999999999999999987
No 9
>3ta6_A Triosephosphate isomerase; HET: FLC; 1.41A {Mycobacterium tuberculosis} SCOP: c.1.1.0 PDB: 3tao_A* 3gvg_A
Probab=100.00 E-value=2.7e-77 Score=544.26 Aligned_cols=208 Identities=40% Similarity=0.615 Sum_probs=197.1
Q ss_pred cCcceEEeecccccCHHHHHHHHHHHhhccccC---CceEEEcCCcccHHHHHHHcC-C--CceEeeeccccCCCccccc
Q 024925 52 SNKFFVGGNWKCNGTKESITKLVSDLNDAKLEA---DVDVVVAPPFVYIDQVKNSLT-D--RIEIAAQNSWVGKGGAFTG 125 (260)
Q Consensus 52 ~rk~~IigNWKmn~t~~~~~~l~~~l~~~~~~~---~v~VvvaPp~~~L~~v~~~~~-~--~i~vgAQnv~~~~~GA~TG 125 (260)
+|||||+||||||++.+++.+|++.+....... +++|+|||||++|..+.+.+. + +|.+|||||++.+.|||||
T Consensus 2 ~rk~~i~gNWKMn~~~~~~~~l~~~l~~~~~~~~~~~vev~v~Pp~~~L~~v~~~~~~~~~~i~vgAQn~~~~~~GAfTG 81 (267)
T 3ta6_A 2 SRKPLIAGNWKMNLNHYEAIALVQKIAFSLPDKYYDRVDVAVIPPFTDLRSVQTLVDGDKLRLTYGAQDLSPHDSGAYTG 81 (267)
T ss_dssp -CCCEEEEECCBCCCHHHHHHHHHHHHHHSCGGGGGTCEEEEECCGGGHHHHHHHHHHTTCSCEEEESCCCSSSSBSCTT
T ss_pred CCCcEEEEEhhhccCHHHHHHHHHHHHHhccccccCCceEEEECCHHHHHHHHHHhcCCCCceEEEecccCCCCCCCccC
Confidence 489999999999999999999999997643322 799999999999999998876 3 5999999999999999999
Q ss_pred ccCHHHHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCChHHHHHHHHHHHHhcCC-
Q 024925 126 EISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIP- 204 (260)
Q Consensus 126 EISa~mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pIlCIGE~leere~g~~~~vl~~Ql~~~l~~i~- 204 (260)
|||++||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++||+|+|.++|.+||+..++.++
T Consensus 82 EIS~~mLkd~G~~~ViiGHSERR~~f~Etde~V~~Kv~~Al~~GL~pIlCvGEtleeReag~t~~vv~~Ql~~~l~~l~~ 161 (267)
T 3ta6_A 82 DVSGAFLAKLGCSYVVVGHSERRTYHNEDDALVAAKAATALKHGLTPIVCIGEHLDVREAGNHVAHNIEQLRGSLAGLLA 161 (267)
T ss_dssp CCCHHHHHHTTCCEEEESCHHHHHHTTCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHTTTCCH
T ss_pred cccHHHHHHcCCCEEEEcchhhccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhCCCHHHHHHHHHHHHHhcCCH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred -CCCceEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhhcCCcccceeeecccC
Q 024925 205 -SWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNMSQQTLPLKHVLSMEG 259 (260)
Q Consensus 205 -~~~~iiIAYEPvWAIGTG~~aspe~iqe~~~~IR~~l~~~~~~~~a~~~~~~~~~ 259 (260)
++++++||||||||||||++||||++|++|++||++|+++|++++|.+..|.|.|
T Consensus 162 ~~~~~vvIAYEPVWAIGTG~tAtpe~aqevh~~IR~~l~~~~~~~~a~~~rIlYGG 217 (267)
T 3ta6_A 162 EQIGSVVIAYEPVWAIGTGRVASAADAQEVCAAIRKELASLASPRIADTVRVLYGG 217 (267)
T ss_dssp HHHTTCEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHSCHHHHTTSCEEECS
T ss_pred HHhCCEEEEECChhhhcCCcCCCHHHHHHHHHHHHHHHHHhhChhhhccceEEEcC
Confidence 6889999999999999999999999999999999999999999999999999987
No 10
>2j27_A Triosephosphate isomerase glycosomal; TIM, 2PG, LOOP7, glycosome, TIM-barrel, gluconeogenesis, lipid synthesis, atomic resolution; 1.15A {Trypanosoma brucei brucei} PDB: 2j24_A 1kv5_A 1tpe_A 1tsi_A* 3tim_A 2v2c_A 2v0t_A 1tri_A 1tti_A 1mss_A 1ttj_A* 2wsq_A 2y70_A 2y6z_A* 1ml1_A 2wsr_A 3q37_A 2v2h_A 2v2d_A 1dkw_A ...
Probab=100.00 E-value=3.9e-77 Score=538.96 Aligned_cols=208 Identities=47% Similarity=0.777 Sum_probs=197.8
Q ss_pred hcCcceEEeecccccCHHHHHHHHHHHhhccccCCceEEEcCCcccHHHHHHHcC-CCceEeeeccccCCCcccccccCH
Q 024925 51 SSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEADVDVVVAPPFVYIDQVKNSLT-DRIEIAAQNSWVGKGGAFTGEISV 129 (260)
Q Consensus 51 ~~rk~~IigNWKmn~t~~~~~~l~~~l~~~~~~~~v~VvvaPp~~~L~~v~~~~~-~~i~vgAQnv~~~~~GA~TGEISa 129 (260)
.||+|||+||||||++.+++.+|++.+.....+.+++|+|||||++|..+.+.+. ++|.+|||||+ .+.||||||||+
T Consensus 2 ~mr~~~i~gNwKmn~~~~~~~~l~~~l~~~~~~~~vev~v~Pp~~~L~~v~~~~~~~~i~vgAQn~~-~~~GA~TGEiS~ 80 (250)
T 2j27_A 2 SKPQPIAAANWKCNGSQQSLSELIDLFNSTSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNAI-AKSGAFTGEVSL 80 (250)
T ss_dssp CCCCCEEEEECCBCCCHHHHHHHHHHHHTCCCCSCCEEEEECCGGGHHHHHHHCCCTTEEEEESCCB-SSCBSCTTCCBH
T ss_pred CCCCcEEEEECccccCHHHHHHHHHHHHhhccccCceEEEeCCHHHHHHHHHHhcCCCceEeecccC-CCCCCcccccCH
Confidence 3799999999999999999999999997643335799999999999999999886 78999999999 999999999999
Q ss_pred HHHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCChHHHHHHHHHHHHhcCC--CCC
Q 024925 130 EQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIP--SWD 207 (260)
Q Consensus 130 ~mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pIlCIGE~leere~g~~~~vl~~Ql~~~l~~i~--~~~ 207 (260)
+||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++||+|+|.++|.+||+..++.++ +++
T Consensus 81 ~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~~ 160 (250)
T 2j27_A 81 PILKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACIGETLQERESGRTAVVVLTQIAAIAKKLKKADWA 160 (250)
T ss_dssp HHHHHTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHHTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHTCCGGGGG
T ss_pred HHHHHcCCCEEEECchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEeCCCHHHhhcccHHHHHHHHHHHHHhcCCHHHhC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999986 688
Q ss_pred ceEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhhcCCcccceeeecccC
Q 024925 208 NVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNMSQQTLPLKHVLSMEG 259 (260)
Q Consensus 208 ~iiIAYEPvWAIGTG~~aspe~iqe~~~~IR~~l~~~~~~~~a~~~~~~~~~ 259 (260)
+++|||||+||||||++||||+||++|++||++|+++||++++.+..|.|.|
T Consensus 161 ~~vIAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGG 212 (250)
T 2j27_A 161 KVVIAYEAVWAIGTGKVATPQQAQEAHALIRSWVSSKIGADVAGELRILYGG 212 (250)
T ss_dssp GEEEEEECGGGTTSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCCEEEES
T ss_pred CEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhcChhhcccccEEEcC
Confidence 9999999999999999999999999999999999999999988888998877
No 11
>1mo0_A TIM, triosephosphate isomerase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; 1.70A {Caenorhabditis elegans} SCOP: c.1.1.1
Probab=100.00 E-value=6.7e-77 Score=543.29 Aligned_cols=212 Identities=51% Similarity=0.802 Sum_probs=200.4
Q ss_pred hhhhcCcceEEeecccccCHHHHHHHHHHHhhccccCCceEEEcCCcccHHHHHHHcCCCceEeeeccccCCCccccccc
Q 024925 48 AMASSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEADVDVVVAPPFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEI 127 (260)
Q Consensus 48 ~m~~~rk~~IigNWKmn~t~~~~~~l~~~l~~~~~~~~v~VvvaPp~~~L~~v~~~~~~~i~vgAQnv~~~~~GA~TGEI 127 (260)
.|.+||||||+||||||++.+++.+|++.+.....+.+++|+|||||++|..+.+.+...|.+|||||++.+.|||||||
T Consensus 18 ~~~~mrk~~i~gNWKmn~t~~~~~~l~~~l~~~~~~~~vevvv~Pp~~~L~~v~~~~~~~i~vgAQn~~~~~~GAfTGEI 97 (275)
T 1mo0_A 18 KAGLTRKFFVGGNWKMNGDYASVDGIVTFLNASADNSSVDVVVAPPAPYLAYAKSKLKAGVLVAAQNCYKVPKGAFTGEI 97 (275)
T ss_dssp CCCSCSCEEEEEECCBCCCHHHHHHHHHHHHHSCCCTTEEEEEECCGGGHHHHHHHSCTTEEEEESCCCSSSSBSCTTCC
T ss_pred hhhcCCCCEEEEecccccCHHHHHHHHHHHhhhccccCceEEEeCcHHHHHHHHHHhhCCCeEEeccCCCCCCCCccCcC
Confidence 45568999999999999999999999999976433357999999999999999998873499999999999999999999
Q ss_pred CHHHHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCChHHHHHHHHHHHHhcCCCCC
Q 024925 128 SVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWD 207 (260)
Q Consensus 128 Sa~mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pIlCIGE~leere~g~~~~vl~~Ql~~~l~~i~~~~ 207 (260)
|++||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|++|+|.++|.+||+..++++++++
T Consensus 98 S~~mLkd~G~~~ViiGHSERR~~f~Etde~V~~Kv~~Al~~GL~pI~CvGEtleeReag~t~~vv~~Ql~~~l~~~~~~~ 177 (275)
T 1mo0_A 98 SPAMIKDLGLEWVILGHSERRHVFGESDALIAEKTVHALEAGIKVVFCIGEKLEEREAGHTKDVNFRQLQAIVDKGVSWE 177 (275)
T ss_dssp CHHHHHHTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHTTTCCST
T ss_pred CHHHHHHcCCCEEEeCchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhCCChHHHHHHHHHHHHhhhhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999887789
Q ss_pred ceEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhhcCCcccceeeecccC
Q 024925 208 NVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNMSQQTLPLKHVLSMEG 259 (260)
Q Consensus 208 ~iiIAYEPvWAIGTG~~aspe~iqe~~~~IR~~l~~~~~~~~a~~~~~~~~~ 259 (260)
+++|||||+||||||++|+||+||++|++||++|++.||++++.++.|.|.|
T Consensus 178 ~vvIAYEPvWAIGTGktAtpe~aqevh~~IR~~l~~~~~~~~a~~vrILYGG 229 (275)
T 1mo0_A 178 NIVIAYEPVWAIGTGKTASGEQAQEVHEWIRAFLKEKVSPAVADATRIIYGG 229 (275)
T ss_dssp TEEEEECCGGGTTTSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSCEEEES
T ss_pred CEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhhChhhcCcccEEEcC
Confidence 9999999999999999999999999999999999999999988888898877
No 12
>1yya_A Triosephosphate isomerase; riken structural genomics/proteom initiative, RSGI, structural genomics; 1.60A {Thermus thermophilus}
Probab=100.00 E-value=5.6e-77 Score=537.95 Aligned_cols=208 Identities=35% Similarity=0.606 Sum_probs=196.9
Q ss_pred cCcceEEeecccccCHHHHHHHHHHHhhccccCCceEEEcCCcccHHHHHHHcC-CCceEeeeccccCCCcccccccCHH
Q 024925 52 SNKFFVGGNWKCNGTKESITKLVSDLNDAKLEADVDVVVAPPFVYIDQVKNSLT-DRIEIAAQNSWVGKGGAFTGEISVE 130 (260)
Q Consensus 52 ~rk~~IigNWKmn~t~~~~~~l~~~l~~~~~~~~v~VvvaPp~~~L~~v~~~~~-~~i~vgAQnv~~~~~GA~TGEISa~ 130 (260)
||+|||+||||||++.+++.+|++.+.......+++|+|||||++|..+.+.+. +++.+|||||++.+.||||||||++
T Consensus 1 Mr~~~i~gNwKmn~~~~~~~~~~~~l~~~~~~~~vev~v~Pp~~~L~~v~~~~~~~~i~vgAQn~~~~~~GA~TGEiS~~ 80 (250)
T 1yya_A 1 MRRVLVAGNWKMHKTPSEARVWFAELKRLLPPLQSEAAVLPAFPILPVAKEVLAETQVGYGAQDVSAHKEGAYTGEVSAR 80 (250)
T ss_dssp CCCCEEEEECCBCCCHHHHHHHHHHHHHHCCCCSSEEEEECCGGGHHHHHHHHTTSSCEEEESCCCSSSSBSCTTCCCHH
T ss_pred CCCCEEEEeCccccCHHHHHHHHHHHHhhccccCceEEEeCCHHHHHHHHHHhcCCCCeEEeccCCCCCCCCccCcCCHH
Confidence 589999999999999999999999997632221299999999999999999886 7899999999999999999999999
Q ss_pred HHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCChHHHHHHHHHHHHhcCC--CCCc
Q 024925 131 QLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIP--SWDN 208 (260)
Q Consensus 131 mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pIlCIGE~leere~g~~~~vl~~Ql~~~l~~i~--~~~~ 208 (260)
||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++||+|+|.++|.+||+..++.++ ++++
T Consensus 81 mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGE~leere~g~t~~vv~~Ql~~~l~~~~~~~~~~ 160 (250)
T 1yya_A 81 MLSDLGCRYAIVGHSERRRYHGETDALVAEKAKRLLEEGITPILCVGEPLEVREKGEAVPYTLRQLRGSLEGVEPPGPEA 160 (250)
T ss_dssp HHHHTTCSEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHTTTCCCSSGGG
T ss_pred HHHHcCCCEEEeCchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCCHHHHHHHHHHHHHhcCCHHHcCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999886 5889
Q ss_pred eEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhhcCCcccceeeecccC
Q 024925 209 VVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNMSQQTLPLKHVLSMEG 259 (260)
Q Consensus 209 iiIAYEPvWAIGTG~~aspe~iqe~~~~IR~~l~~~~~~~~a~~~~~~~~~ 259 (260)
++|||||+||||||++||||+||++|++||++|+++||++++.++.|.|-|
T Consensus 161 vvIAYEPvWAIGTG~~Atpe~aqevh~~IR~~l~~~~~~~~a~~vrIlYGG 211 (250)
T 1yya_A 161 LVIAYEPVWAIGTGKNATPEDAEAMHQAIRKALSERYGEAFASRVRILYGG 211 (250)
T ss_dssp CEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHHCHHHHTTCEEEEES
T ss_pred EEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhcCccccCceeEEEcC
Confidence 999999999999999999999999999999999999999988899999977
No 13
>3kxq_A Triosephosphate isomerase; ssgcid, NIH, niaid, SBRI, UW, gluconeogenesis, glycolysis, pentose shunt; 1.60A {Bartonella henselae}
Probab=100.00 E-value=2.1e-77 Score=546.63 Aligned_cols=216 Identities=33% Similarity=0.523 Sum_probs=185.3
Q ss_pred CcchhhhhhhcCcceEEeecccccCHHHHHHHHHHHhhcccc-C-CceEEEcCCcccHHHHHHHcC-CCceEeeeccccC
Q 024925 42 RSSSVVAMASSNKFFVGGNWKCNGTKESITKLVSDLNDAKLE-A-DVDVVVAPPFVYIDQVKNSLT-DRIEIAAQNSWVG 118 (260)
Q Consensus 42 ~~~~~~~m~~~rk~~IigNWKmn~t~~~~~~l~~~l~~~~~~-~-~v~VvvaPp~~~L~~v~~~~~-~~i~vgAQnv~~~ 118 (260)
+....-.|..||||||+||||||++.+++.+|++.+...... . +++|+|||||++|..+.+.+. ++|.+|||||++.
T Consensus 15 ~~~~~~~m~~MRk~~i~gNWKMn~~~~~~~~l~~~l~~~~~~~~~~vevvv~Pp~~~L~~v~~~~~~~~i~vgAQn~~~~ 94 (275)
T 3kxq_A 15 QTQGPGSMSPNIRPFIAGNWKMNGTGESLGELRAIAAGISSDLGRLFEALICVPATLLSRAFDILGGENILLGGQNCHFD 94 (275)
T ss_dssp -----------CCCEEEEECCBCCCGGGHHHHHHHHHHHC----CCSEEEEECCTTTHHHHHHHHTTSSSEEEESCCCSS
T ss_pred ccccchHhhcCCCCEEEEEhhhCcCHHHHHHHHHHHHhhcccccCCceEEEeCCHHHHHHHHHHhcCCCceEEecccccc
Confidence 345556788899999999999999999999999999875443 4 799999999999999999887 7899999999999
Q ss_pred CCcccccccCHHHHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCChHHHHHHHHHH
Q 024925 119 KGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKA 198 (260)
Q Consensus 119 ~~GA~TGEISa~mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pIlCIGE~leere~g~~~~vl~~Ql~~ 198 (260)
+.||||||||++||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++||+|+|.++|.+||+.
T Consensus 95 ~~GAfTGEIS~~mLkd~G~~~VIiGHSERR~~f~Etde~V~~Kv~~Al~~GL~pIlCVGEtleeRe~g~t~~vv~~Ql~~ 174 (275)
T 3kxq_A 95 DYGPYTGDISAFMLKEAGASHVIIGHSERRTVYQESDAIVRAKVQAAWRAGLVALICVGETLEERKSNKVLDVLTRQLEG 174 (275)
T ss_dssp SSBSCTTCCCHHHHHHHTCSEEEESCHHHHHHTCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHH
T ss_pred cCCCccCcCCHHHHHHcCCCEEEECchhhccccCCCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhc-CCCCCceEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhhcCCcccceeeecccC
Q 024925 199 YADA-IPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNMSQQTLPLKHVLSMEG 259 (260)
Q Consensus 199 ~l~~-i~~~~~iiIAYEPvWAIGTG~~aspe~iqe~~~~IR~~l~~~~~~~~a~~~~~~~~~ 259 (260)
+++. ..+ +++|||||||||||||++||||+||++|++||++|+++|+ ++|.+..|.|.|
T Consensus 175 ~l~~~~~~-~~vVIAYEPVWAIGTGktAt~e~aqevh~~IR~~l~~~~~-~~a~~~rIlYGG 234 (275)
T 3kxq_A 175 SLPDGATA-ENIIIAYEPVWAVGTGNTATSADVAEVHAFIHHKMHSRFG-DEGAKIRLLYGG 234 (275)
T ss_dssp HSCTTCCT-TTEEEEECCCC--------CHHHHHHHHHHHHHHHHHHHH-HHHTTSCEEECS
T ss_pred HHcCCccc-CCEEEEECChhhhcCCCCCCHHHHHHHHHHHHHHHHHhhh-hhcccceEEEcC
Confidence 9986 225 8999999999999999999999999999999999999998 778899999987
No 14
>2i9e_A Triosephosphate isomerase; 2.00A {Tenebrio molitor}
Probab=100.00 E-value=8.8e-77 Score=538.87 Aligned_cols=208 Identities=51% Similarity=0.860 Sum_probs=198.3
Q ss_pred cCcceEEeecccccCHHHHHHHHHHHhhccccCCceEEEcCCcccHHHHHHHcCCCceEeeeccccCCCcccccccCHHH
Q 024925 52 SNKFFVGGNWKCNGTKESITKLVSDLNDAKLEADVDVVVAPPFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQ 131 (260)
Q Consensus 52 ~rk~~IigNWKmn~t~~~~~~l~~~l~~~~~~~~v~VvvaPp~~~L~~v~~~~~~~i~vgAQnv~~~~~GA~TGEISa~m 131 (260)
+|||||+||||||++.+++.+|++.+.......+++|+|||||++|..+.+.+..+|.+|||||++.+.||||||||++|
T Consensus 2 ~r~~~i~gNwKmn~~~~~~~~l~~~l~~~~~~~~vev~v~Pp~~~L~~v~~~~~~~i~vgAQn~~~~~~GA~TGEiS~~m 81 (259)
T 2i9e_A 2 ARKFVVGGNWKMNGDKKQINEIIGFLKSGPLNQDTEVVVGVPAIYLELVRTCVPASIGVAAQNCYKVPKGAFTGEISPAM 81 (259)
T ss_dssp CCCEEEEEECCBCCCHHHHHHHHHHHHHSCCCTTEEEEEEECGGGHHHHHHHSCTTSEEEESCCCSSSSBSCTTCCCHHH
T ss_pred CCCcEEEEecccccCHHHHHHHHHHHhhhcccCCeeEEEeCCHHHHHHHHHHhhCCCeEEeccCCCCCCCCccCccCHHH
Confidence 68999999999999999999999999764333579999999999999999888656999999999999999999999999
Q ss_pred HHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCChHHHHHHHHHHHHhcCCCCCceEE
Q 024925 132 LKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVI 211 (260)
Q Consensus 132 Lkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pIlCIGE~leere~g~~~~vl~~Ql~~~l~~i~~~~~iiI 211 (260)
|+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++||+|+|.++|.+||++++++++++++++|
T Consensus 82 L~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pIvCvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~~vI 161 (259)
T 2i9e_A 82 IKDVGADWVILGHSERRQIFGESDELIAEKVCHALESGLKVIACIGETLEEREAGKTEEVVFRQTKAIAAKVNDWSNVVI 161 (259)
T ss_dssp HHHTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHCSCCTTEEE
T ss_pred HHHcCCCEEEECchhhhhhcCCCHHHHHHHHHHHHHCCCeEEEEcCCcHHHHhcCCHHHHHHHHHHHHHhcchhhcCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988877899999
Q ss_pred EEcccccccCCCCCCHHHHHHHHHHHHHHHHhhcCCcccceeeecccC
Q 024925 212 AYEPVWAIGTGKVATPEQAQEVHAALRDWLKNMSQQTLPLKHVLSMEG 259 (260)
Q Consensus 212 AYEPvWAIGTG~~aspe~iqe~~~~IR~~l~~~~~~~~a~~~~~~~~~ 259 (260)
||||+||||||++||||+||++|++||++|+++||++++.++.|.|.|
T Consensus 162 AYEPvWAIGTG~~Atpe~aqevh~~IR~~l~~~~~~~va~~vrIlYGG 209 (259)
T 2i9e_A 162 AYEPVWAIGTGKTATPQQAQDVHKALRQWICENIDAKVGNSIRIQYGG 209 (259)
T ss_dssp EECCGGGTTSSSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCEEEECS
T ss_pred EEcCHHHcCCCCCCCHHHHHHHHHHHHHHHHHhcChhhcccccEEEcC
Confidence 999999999999999999999999999999999999988899999977
No 15
>1b9b_A TIM, protein (triosephosphate isomerase); thermophilic; 2.85A {Thermotoga maritima} SCOP: c.1.1.1
Probab=100.00 E-value=6.5e-77 Score=538.70 Aligned_cols=208 Identities=43% Similarity=0.679 Sum_probs=197.8
Q ss_pred cCcceEEeecccccCHHHHHHHHHHHhhccc-cCCceEEEcCCcccHHHHHHHcC-CCceEeeeccccCCCcccccccCH
Q 024925 52 SNKFFVGGNWKCNGTKESITKLVSDLNDAKL-EADVDVVVAPPFVYIDQVKNSLT-DRIEIAAQNSWVGKGGAFTGEISV 129 (260)
Q Consensus 52 ~rk~~IigNWKmn~t~~~~~~l~~~l~~~~~-~~~v~VvvaPp~~~L~~v~~~~~-~~i~vgAQnv~~~~~GA~TGEISa 129 (260)
||+|||+||||||++.+++.+|++.+..... ..+++|+|||||++|..+.+.+. +++.+|||||++.+.||||||||+
T Consensus 2 Mrk~~i~gNwKmn~~~~~~~~l~~~l~~~~~~~~~vev~v~Pp~~~L~~v~~~~~~~~i~vgAQn~~~~~~GA~TGEiS~ 81 (255)
T 1b9b_A 2 TRKLILAGNWKMHKTISEAKKFVSLLVNELHDVKEFEIVVCPPFTALSEVGEILSGRNIKLGAQNVFYEDQGAFTGEISP 81 (255)
T ss_dssp CCSCEEEEECCBCCCHHHHHHHHHHHHHHTSSCCSSEEEEECCGGGHHHHHHHHTTSSSEEEESCCCSSSSBSCTTCCCH
T ss_pred CCCCEEEEeCCcCcCHHHHHHHHHHHHhhcccccCeeEEEeCcHHHHHHHHHHhcCCCceEeeccCCCCCCCCccCcCCH
Confidence 6899999999999999999999999876332 24799999999999999999886 789999999999999999999999
Q ss_pred HHHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCChHHHHHHHHHHHHhcCC--CCC
Q 024925 130 EQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIP--SWD 207 (260)
Q Consensus 130 ~mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pIlCIGE~leere~g~~~~vl~~Ql~~~l~~i~--~~~ 207 (260)
+||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++||+|+|.++|.+||+..+++++ +++
T Consensus 82 ~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~~ 161 (255)
T 1b9b_A 82 LMLQEIGVEYVIVGHSERRRIFKEDDEFINRKVKAVLEKGMTPILCVGETLEEREKGLTFCVVEKQVREGFYGLDKEEAK 161 (255)
T ss_dssp HHHHTTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHHTCHHHHHHHHHHHHHTTCCHHHHT
T ss_pred HHHHHcCCCEEEECchhhccccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCCHHHHHHHHHHHHHhcCCHHHcC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999987 578
Q ss_pred ceEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhhcCCcccceeeecccC
Q 024925 208 NVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNMSQQTLPLKHVLSMEG 259 (260)
Q Consensus 208 ~iiIAYEPvWAIGTG~~aspe~iqe~~~~IR~~l~~~~~~~~a~~~~~~~~~ 259 (260)
+++|||||+||||||++||||+||++|++||++|+++||++++.+..|.|.|
T Consensus 162 ~~vIAYEPvWAIGTG~~Atpe~aqevh~~IR~~l~~~~~~~~a~~vrIlYGG 213 (255)
T 1b9b_A 162 RVVIAYEPVWAIGTGRVATPQQAQEVHAFIRKLLSEMYDEETAGSIRILYGG 213 (255)
T ss_dssp TCEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHSCHHHHHHSEEEEES
T ss_pred CEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhcCccccCcceEEEcC
Confidence 9999999999999999999999999999999999999999988889999877
No 16
>3m9y_A Triosephosphate isomerase; TIM barrel, glycolysis, gluconeogenesis, pentose; HET: CIT; 1.90A {Staphylococcus aureus} SCOP: c.1.1.1 PDB: 3uwv_A* 3uwu_A* 3uww_A* 3uwy_A 3uwz_A*
Probab=100.00 E-value=4.3e-77 Score=539.77 Aligned_cols=207 Identities=38% Similarity=0.616 Sum_probs=195.5
Q ss_pred cCcceEEeecccccCHHHHHHHHHHHhhccc-cCCceEEEcCCcccHHHHHHHc---C-CCceEeeeccccCCCcccccc
Q 024925 52 SNKFFVGGNWKCNGTKESITKLVSDLNDAKL-EADVDVVVAPPFVYIDQVKNSL---T-DRIEIAAQNSWVGKGGAFTGE 126 (260)
Q Consensus 52 ~rk~~IigNWKmn~t~~~~~~l~~~l~~~~~-~~~v~VvvaPp~~~L~~v~~~~---~-~~i~vgAQnv~~~~~GA~TGE 126 (260)
||||||+||||||++.+++.+|++.+ .... ..+++|+|||||++|..+.+.+ . ++|.+|||||++.+.||||||
T Consensus 2 Mrk~~i~gNwKmn~~~~~~~~l~~~l-~~~~~~~~~ev~v~Pp~~~L~~v~~~~~~~~~~~i~vgAQn~~~~~~GA~TGE 80 (254)
T 3m9y_A 2 MRTPIIAGNWKMNKTVQEAKDFVNAL-PTLPDSKEVESVICAPAIQLDALTTAVKEGKAQGLEIGAQNTYFEDNGAFTGE 80 (254)
T ss_dssp CCCCEEEEECCBCCCHHHHHHHHHHC-CCCCCTTTCEEEEEECHHHHHHHHHHHHTTSSTTCEEEESCCCSSSSBSCTTC
T ss_pred CCCCEEEEEhhhCcCHHHHHHHHHHH-HhccccCCceEEEECCHHHHHHHHHHHhhcCCCcceEEecccccccCCCccCc
Confidence 68999999999999999999999999 4322 2579999999999999999988 5 789999999999999999999
Q ss_pred cCHHHHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCChHHHHHHHHHHHHhcCC--
Q 024925 127 ISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIP-- 204 (260)
Q Consensus 127 ISa~mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pIlCIGE~leere~g~~~~vl~~Ql~~~l~~i~-- 204 (260)
||++||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++||+|+|.++|.+||+..++.++
T Consensus 81 iS~~mL~d~G~~~ViiGHSERR~~f~Etd~~V~~Kv~~Al~~GL~pIlCvGEtleere~g~t~~vv~~Ql~~~l~~~~~~ 160 (254)
T 3m9y_A 81 TSPVALADLGVKYVVIGHSERRELFHETDEEINKKAHAIFKHGMTPIICVGETDEERESGKANDVVGEQVKKAVAGLSED 160 (254)
T ss_dssp CCHHHHHHTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHTTCCHH
T ss_pred CCHHHHHHcCCCEEEECcccccCccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHHCCCHHHHHHHHHHHHHhcCCHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCceEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhhcCCcccceeeecccC
Q 024925 205 SWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNMSQQTLPLKHVLSMEG 259 (260)
Q Consensus 205 ~~~~iiIAYEPvWAIGTG~~aspe~iqe~~~~IR~~l~~~~~~~~a~~~~~~~~~ 259 (260)
++++++|||||+||||||++|||+++|++|++||++|++.|+++++.+..|.|.|
T Consensus 161 ~~~~vvIAYEPvWAIGTG~~At~e~aqevh~~IR~~l~~~~~~~~a~~~rIlYGG 215 (254)
T 3m9y_A 161 QLKSVVIAYEPIWAIGTGKSSTSEDANEMCAFVRQTIADLSSKEVSEATRIQYGG 215 (254)
T ss_dssp HHHHCEEEECCGGGCC--CCCCHHHHHHHHHHHHHHHHHHSCHHHHTTSEEEECS
T ss_pred HhCCEEEEECChhhhcCCCCCCHHHHHHHHHHHHHHHHHhcChhhcCCccEEEcC
Confidence 6889999999999999999999999999999999999999999999999999987
No 17
>1tre_A Triosephosphate isomerase; intramolecular oxidoreductase; 2.60A {Escherichia coli} SCOP: c.1.1.1 PDB: 1tmh_A
Probab=100.00 E-value=7.3e-77 Score=538.47 Aligned_cols=207 Identities=43% Similarity=0.677 Sum_probs=196.3
Q ss_pred cCcceEEeecccccCHHHHHHHHHHHhhccc-cCCceEEEcCCcccHHHHHHHcC-CCceEeeeccccCCCcccccccCH
Q 024925 52 SNKFFVGGNWKCNGTKESITKLVSDLNDAKL-EADVDVVVAPPFVYIDQVKNSLT-DRIEIAAQNSWVGKGGAFTGEISV 129 (260)
Q Consensus 52 ~rk~~IigNWKmn~t~~~~~~l~~~l~~~~~-~~~v~VvvaPp~~~L~~v~~~~~-~~i~vgAQnv~~~~~GA~TGEISa 129 (260)
||+|||+||||||++.+++.+|++.+..... ..+++|+|||||++|..+.+.+. +++.+|||||++.+.||||||||+
T Consensus 1 Mrk~~i~gNwKmn~~~~~~~~~~~~l~~~~~~~~~vev~v~Pp~~~L~~v~~~~~~~~i~vgAQn~~~~~~GA~TGEiS~ 80 (255)
T 1tre_A 1 MRHPLVMGNWKLNGSRHMVHELVSNLRKELAGVAGCAVAIAPPEMYIDMAKREAEGSHIMLGAQNVNLNLSGAFTGETSA 80 (255)
T ss_dssp CCCCEEEEECCBCCCHHHHHHHHHHHHHHHTTCCSCEEEEECCTTTHHHHHHHHTTSSEEEEESCCCSCSSBSCTTCCCH
T ss_pred CCCCEEEEecccccCHHHHHHHHHHHHhhcccccCeeEEEeCcHHHHHHHHHHhcCCCCeEeeccCCCCCCCCcCCcCCH
Confidence 5899999999999999999999999876322 24699999999999999999886 789999999999999999999999
Q ss_pred HHHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCChHHHHHHHHHHHHhcCC--CCC
Q 024925 130 EQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIP--SWD 207 (260)
Q Consensus 130 ~mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pIlCIGE~leere~g~~~~vl~~Ql~~~l~~i~--~~~ 207 (260)
+||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++||+|+|.++|.+||+..++.++ +++
T Consensus 81 ~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~~ 160 (255)
T 1tre_A 81 AMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFE 160 (255)
T ss_dssp HHHHHHTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHCGGGGT
T ss_pred HHHHHcCCCEEEECccccccccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCCHHHHHHHHHHHHHhcCCHHHcC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998886 689
Q ss_pred ceEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhhcCCcccceeeecccC
Q 024925 208 NVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNMSQQTLPLKHVLSMEG 259 (260)
Q Consensus 208 ~iiIAYEPvWAIGTG~~aspe~iqe~~~~IR~~l~~~~~~~~a~~~~~~~~~ 259 (260)
+++|||||+||||||++||||+||++|++||++|++ ||++++.++.|.|.|
T Consensus 161 ~vvIAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~-~~~~~a~~vrIlYGG 211 (255)
T 1tre_A 161 GAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHIAK-VDANIAEQVIIQYGG 211 (255)
T ss_dssp TCEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHCEEEECS
T ss_pred cEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHh-cChhhcCcccEEEcC
Confidence 999999999999999999999999999999999999 999888889999977
No 18
>2yc6_A Triosephosphate isomerase; glycolysis; HET: PGA; 1.45A {Giardia intestinalis} PDB: 2dp3_A 2yc7_A* 3pf3_A 2yc8_A
Probab=100.00 E-value=1.6e-76 Score=536.69 Aligned_cols=208 Identities=45% Similarity=0.749 Sum_probs=197.1
Q ss_pred cCcceEEeecccccCHHHHHHHHHHHhhccccCCceEEEcCCcccHHHHHHHcC-CCceEeeeccccCCCcccccccCHH
Q 024925 52 SNKFFVGGNWKCNGTKESITKLVSDLNDAKLEADVDVVVAPPFVYIDQVKNSLT-DRIEIAAQNSWVGKGGAFTGEISVE 130 (260)
Q Consensus 52 ~rk~~IigNWKmn~t~~~~~~l~~~l~~~~~~~~v~VvvaPp~~~L~~v~~~~~-~~i~vgAQnv~~~~~GA~TGEISa~ 130 (260)
||+|||+||||||++.+++.+|++.+.......+++|+|||||++|..+.+.+. +++.+|||||++.+.||||||||++
T Consensus 3 ~r~~~i~gNwKmn~~~~~~~~l~~~l~~~~~~~~vev~v~Pp~~~L~~v~~~~~~~~i~vgAQn~~~~~~GAfTGEiS~~ 82 (257)
T 2yc6_A 3 ARRPFIGGNFKCNGSLDFIKSHVAAIAAHKIPDSVDVVIAPSAVHLSTAIAANTSKQLRIAAQNVYLEGNGAWTGETSVE 82 (257)
T ss_dssp CCCCEEEEECCSCCCHHHHHHHHHHHHTSCCCTTSEEEEECCGGGHHHHHHHCCCSSCEEEESCCCSSCSSSCTTCCCHH
T ss_pred CCCeEEEEECccccCHHHHHHHHHHHhhcccccCceEEEeCCHHHHHHHHHHhCCCCceEEeccCCCCCCcCccCccCHH
Confidence 689999999999999999999999997611125799999999999999999886 7899999999999999999999999
Q ss_pred HHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCChHHHHHHHHHHHHhcC-C--C-C
Q 024925 131 QLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAI-P--S-W 206 (260)
Q Consensus 131 mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pIlCIGE~leere~g~~~~vl~~Ql~~~l~~i-~--~-~ 206 (260)
||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++||+|+|.++|.+||+..++.+ + + +
T Consensus 83 mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~~~ 162 (257)
T 2yc6_A 83 MLQDMGLKHVIVGHSERRRIMGETDEQSAKKAKRALEKGMTVIFCVGETLDERKANRTMEVNIAQLEALGKELGESKMLW 162 (257)
T ss_dssp HHHHTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHcCCCEEEECchhhccccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCCHHHHHHHHHHHHHhcCCChhhcc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999988 5 3 7
Q ss_pred CceEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhhcCCcccceeeecccC
Q 024925 207 DNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNMSQQTLPLKHVLSMEG 259 (260)
Q Consensus 207 ~~iiIAYEPvWAIGTG~~aspe~iqe~~~~IR~~l~~~~~~~~a~~~~~~~~~ 259 (260)
++++|||||+||||||++|+||+||++|++||++|+++||++++.++.|.|.|
T Consensus 163 ~~vvIAYEPvWAIGTG~~Atpe~aqevh~~IR~~l~~~~~~~~a~~vrIlYGG 215 (257)
T 2yc6_A 163 KEVVIAYEPVWSIGTGVVATPEQAEEVHVGLRKWFVEKVAAEGAQHIRIIYGG 215 (257)
T ss_dssp HTEEEEECCGGGTTTSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEES
T ss_pred CCEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhcChhhcccceEEEcC
Confidence 89999999999999999999999999999999999999999988899999977
No 19
>1aw2_A Triosephosphate isomerase; psychrophilic, vibrio marinus; 2.65A {Moritella marina} SCOP: c.1.1.1 PDB: 1aw1_A
Probab=100.00 E-value=2.7e-76 Score=535.06 Aligned_cols=207 Identities=41% Similarity=0.685 Sum_probs=194.9
Q ss_pred cCcceEEeecccccCHHHHHHHHHHHhhccc-cCCceEEEcCCcccHHHHHHHcC---CCceEeeeccccCCCccccccc
Q 024925 52 SNKFFVGGNWKCNGTKESITKLVSDLNDAKL-EADVDVVVAPPFVYIDQVKNSLT---DRIEIAAQNSWVGKGGAFTGEI 127 (260)
Q Consensus 52 ~rk~~IigNWKmn~t~~~~~~l~~~l~~~~~-~~~v~VvvaPp~~~L~~v~~~~~---~~i~vgAQnv~~~~~GA~TGEI 127 (260)
||+|||+||||||++.+++.+|++.+..... ..+++|+|||||++|..+.+.+. ++|.+|||||++.+.|||||||
T Consensus 1 mr~~~i~gNwKmn~~~~~~~~~~~~l~~~~~~~~~vev~v~Pp~~~L~~v~~~~~~~~~~i~vgAQn~~~~~~GA~TGEi 80 (256)
T 1aw2_A 1 MRHPVVMGNWKLNGSKEMVVDLLNGLNAELEGVTGVDVAVAPPALFVDLAERTLTEAGSAIILGAQNTDLNNSGAFTGDM 80 (256)
T ss_dssp -CCCEEEEECCBCCCHHHHHHHHHHHHHHTTTCCSSEEEEECCGGGHHHHHHHHHHHTCCCEEEESCCCSCSSBSCTTCC
T ss_pred CCCCEEEEEcccccCHHHHHHHHHHHHhhcccccCeeEEEeCcHHHHHHHHHHHhCCCCCceEEeccCCCCCCCCccCcc
Confidence 5899999999999999999999999976322 24699999999999999988774 5799999999999999999999
Q ss_pred CHHHHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCChHHHHHHHHHHHHhcCC--C
Q 024925 128 SVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIP--S 205 (260)
Q Consensus 128 Sa~mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pIlCIGE~leere~g~~~~vl~~Ql~~~l~~i~--~ 205 (260)
|++||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++||+|+|.++|.+||+..++.++ +
T Consensus 81 S~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~ 160 (256)
T 1aw2_A 81 SPAMLKEFGATHIIIGHSERREYHAESDEFVAKKFAFLKENGLTPVLCIGESDAQNEAGETMAVCARQLDAVINTQGVEA 160 (256)
T ss_dssp CHHHHHHHTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHHTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHCGGG
T ss_pred CHHHHHHcCCCEEEECchhhccccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCCHHHHHHHHHHHHHhcCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998886 5
Q ss_pred CCceEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhhcCCcccceeeecccC
Q 024925 206 WDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNMSQQTLPLKHVLSMEG 259 (260)
Q Consensus 206 ~~~iiIAYEPvWAIGTG~~aspe~iqe~~~~IR~~l~~~~~~~~a~~~~~~~~~ 259 (260)
+++++|||||+||||||++||||+||++|++||++|++ +|++++.++.|.|.|
T Consensus 161 ~~~vvIAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~-~~~~~a~~vrIlYGG 213 (256)
T 1aw2_A 161 LEGAIIAYEPIWAIGTGKAATAEDAQRIHAQIRAHIAE-KSEAVAKNVVIQYGG 213 (256)
T ss_dssp GTTCEEEECCTTTTTSSCCCCHHHHHHHHHHHHHHHHT-TCHHHHHHCEEEECS
T ss_pred cCCEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHh-cChhhcccccEEEcC
Confidence 89999999999999999999999999999999999999 798888889999987
No 20
>2btm_A TIM, protein (triosephosphate isomerase); thermophilic triose-phosphate, glycolysis; 2.40A {Geobacillus stearothermophilus} SCOP: c.1.1.1 PDB: 1btm_A
Probab=100.00 E-value=3.5e-76 Score=533.27 Aligned_cols=207 Identities=37% Similarity=0.607 Sum_probs=196.6
Q ss_pred CcceEEeecccccCHHHHHHHHHHHhhcccc-CCceEEEcCCcccHHHHHHHcC-CCceEeeeccccCCCcccccccCHH
Q 024925 53 NKFFVGGNWKCNGTKESITKLVSDLNDAKLE-ADVDVVVAPPFVYIDQVKNSLT-DRIEIAAQNSWVGKGGAFTGEISVE 130 (260)
Q Consensus 53 rk~~IigNWKmn~t~~~~~~l~~~l~~~~~~-~~v~VvvaPp~~~L~~v~~~~~-~~i~vgAQnv~~~~~GA~TGEISa~ 130 (260)
|+|||+||||||++.+++.+|++.+...... .+++|+|||||++|..+.+.+. +++.+|||||++.+.||||||||++
T Consensus 1 r~~~i~gNwKmn~~~~~~~~~~~~l~~~~~~~~~vev~v~Pp~~~L~~v~~~~~~~~i~vgAQn~~~~~~GA~TGEiS~~ 80 (252)
T 2btm_A 1 RKPIIAGNWKMNGTLAEAVQFVEDVKGHVPPADEVISVVCAPFLFLDRLVQAADGTDLKIGAQTMHFADQGAYTGEVSPV 80 (252)
T ss_dssp CCCEEEEECCBCCCHHHHHHHHHHHTTTSCCTTTCEEEEEECGGGHHHHHHHHTTSSEEEEESCCCSSSSBSCTTCCCHH
T ss_pred CCcEEEEEcccccCHHHHHHHHHHHHhhcccccCeeEEEECcHHHHHHHHHHhcCCCceEEeccCCCCCCCCcCCcCCHH
Confidence 5799999999999999999999998753222 4699999999999999998886 7899999999999999999999999
Q ss_pred HHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCChHHHHHHHHHHHHhcCC--CCCc
Q 024925 131 QLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIP--SWDN 208 (260)
Q Consensus 131 mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pIlCIGE~leere~g~~~~vl~~Ql~~~l~~i~--~~~~ 208 (260)
||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++||+|+|.++|.+||+..++.++ ++++
T Consensus 81 mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~~~ 160 (252)
T 2btm_A 81 MLKDLGVTYVILGHSERRQMFAETDETVNKKVLAAFTRGLIPIICCGESLEEREAGQTNAVVASQVEKALAGLTPEQVKQ 160 (252)
T ss_dssp HHHHHTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHHTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHTTCCHHHHTT
T ss_pred HHHHcCCCEEEeCchhcccccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhCCCHHHHHHHHHHHHHhcCCHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987 5789
Q ss_pred eEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhhcCCcccceeeecccC
Q 024925 209 VVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNMSQQTLPLKHVLSMEG 259 (260)
Q Consensus 209 iiIAYEPvWAIGTG~~aspe~iqe~~~~IR~~l~~~~~~~~a~~~~~~~~~ 259 (260)
++|||||+||||||++||||+||++|++||++|+++||++++.+..|.|.|
T Consensus 161 ~vIAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGG 211 (252)
T 2btm_A 161 AVIAYEPIWAIGTGKSSTPEDANSVCGHIRSVVSRLFGPEAAEAIRIQYGG 211 (252)
T ss_dssp CEEEECCGGGTTTSCCCCHHHHHHHHHHHHHHHHHHHCHHHHTTSEEEEES
T ss_pred EEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhcCccccCceeEEEcC
Confidence 999999999999999999999999999999999999999988899999977
No 21
>1m6j_A TIM, TPI, triosephosphate isomerase; asymmetry, monomer stability; 1.50A {Entamoeba histolytica} SCOP: c.1.1.1
Probab=100.00 E-value=2.3e-76 Score=536.92 Aligned_cols=207 Identities=46% Similarity=0.821 Sum_probs=195.9
Q ss_pred cCcceEEeecccccCHHHHHHHHHHHh---hccccCCceEEEcCCcccHHHHHHHcC-CC----ceEeeeccccCCCccc
Q 024925 52 SNKFFVGGNWKCNGTKESITKLVSDLN---DAKLEADVDVVVAPPFVYIDQVKNSLT-DR----IEIAAQNSWVGKGGAF 123 (260)
Q Consensus 52 ~rk~~IigNWKmn~t~~~~~~l~~~l~---~~~~~~~v~VvvaPp~~~L~~v~~~~~-~~----i~vgAQnv~~~~~GA~ 123 (260)
||+|||+||||||++.+++.+|++.+. ......+++|+|||||++|..+.+.+. ++ |.+|||||+ .+.|||
T Consensus 3 mr~~~i~gNwKmn~~~~~~~~l~~~l~~~~~~~~~~~vev~v~Pp~~~L~~v~~~~~~~~~~~~i~vgAQn~~-~~~GAf 81 (261)
T 1m6j_A 3 AGKFVVGGNWKCNGTLASIETLTKGVAASVDAELAKKVEVIVGVPFIYIPKVQQILAGEANGANILVSAENAW-TKSGAY 81 (261)
T ss_dssp CSCEEEEEECCBCCCHHHHHHHHHHHHHHCCHHHHTTEEEEEEECGGGHHHHHHHHHTSTTGGGEEEEESCCB-SSSBSC
T ss_pred CCCcEEEEEcccccCHHHHHHHHHHHHhhhhhccccCceEEEeCCHHHHHHHHHHhcCCCCCceeEEEeccCC-CCCCCc
Confidence 689999999999999999999999987 432235799999999999999998875 55 999999999 999999
Q ss_pred ccccCHHHHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCChHHHHHHHHHHHHhcC
Q 024925 124 TGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAI 203 (260)
Q Consensus 124 TGEISa~mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pIlCIGE~leere~g~~~~vl~~Ql~~~l~~i 203 (260)
|||||++||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|++|+|.++|.+||+..++.+
T Consensus 82 TGEiS~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~ 161 (261)
T 1m6j_A 82 TGEVHVGMLVDCQVPYVILGHSERRQIFHESNEQVAEKVKVAIDAGLKVIACIGETEAQRIANQTEEVVAAQLKAINNAI 161 (261)
T ss_dssp TTCCBHHHHHHTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHHTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHS
T ss_pred cccCCHHHHHHcCCCEEEECchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhCCCHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred C--CCCceEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhhcCCcccceeeecccC
Q 024925 204 P--SWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNMSQQTLPLKHVLSMEG 259 (260)
Q Consensus 204 ~--~~~~iiIAYEPvWAIGTG~~aspe~iqe~~~~IR~~l~~~~~~~~a~~~~~~~~~ 259 (260)
+ ++++++|||||+||||||++||||+||++|++||++|++.||++++.+..|.|.|
T Consensus 162 ~~~~~~~~vIAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGG 219 (261)
T 1m6j_A 162 SKEAWKNIILAYEPVWAIGTGKTATPDQAQEVHQYIRKWMTENISKEVAEATRIQYGG 219 (261)
T ss_dssp CTGGGGGEEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSCEEECS
T ss_pred CHHHcCCEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhhChhhcccccEEEcC
Confidence 5 6789999999999999999999999999999999999999999988888999977
No 22
>3s6d_A Putative triosephosphate isomerase; seattle structural genomics center for infectious disease, S pathogenic fungus, eukaryote; 2.20A {Coccidioides immitis RS}
Probab=100.00 E-value=2.4e-73 Score=526.36 Aligned_cols=207 Identities=28% Similarity=0.418 Sum_probs=188.7
Q ss_pred cCcceEEeecccccCHHHHHHHHHHHhhccc-------cCCceEEEcCCcccHHHHHHHcC---------------CCce
Q 024925 52 SNKFFVGGNWKCNGTKESITKLVSDLNDAKL-------EADVDVVVAPPFVYIDQVKNSLT---------------DRIE 109 (260)
Q Consensus 52 ~rk~~IigNWKmn~t~~~~~~l~~~l~~~~~-------~~~v~VvvaPp~~~L~~v~~~~~---------------~~i~ 109 (260)
||||||+||||||++..++.+|+++|..... ..+++|+|||||++|..+.+.+. ++|.
T Consensus 34 mrk~li~gNWKMn~t~~~~~~~~~~l~~~l~~~~~~~~~~~vevvV~Ppf~~L~~v~~~l~~~~~~~~~~~~~~~~~~i~ 113 (310)
T 3s6d_A 34 LPKTLLIISLKMYFTPSRTIDYIQGLLEPRNDIIRQENRSRLLLALIPDFLTIYPCSEAIKEFESNLAAPQDADTPPPLL 113 (310)
T ss_dssp CCSEEEEEECTTCCCHHHHHHHHHHHHCGGGCCSCGGGTTTEEEEEECCGGGHHHHHHHHHHHHTTSCCC------CSSE
T ss_pred ccCCEEEEEccccCCHHHHHHHHHHHHHHHhhcccccccCCceEEEECCHHHHHHHHHHHhhccccccccccccCCCcce
Confidence 6999999999999999999999998865322 14689999999999999988663 6799
Q ss_pred EeeeccccCCCcccccccCHHHHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCcHHHHh-----
Q 024925 110 IAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQERE----- 184 (260)
Q Consensus 110 vgAQnv~~~~~GA~TGEISa~mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pIlCIGE~leere----- 184 (260)
+|||||++.+.||||||||++||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|+
T Consensus 114 vgAQn~~~~~~GAfTGEISa~mLkd~G~~~ViiGHSERR~~f~Etde~V~~Kv~aAl~~GL~pIvCVGEtleere~~~~~ 193 (310)
T 3s6d_A 114 LGAQDCFWDSLGPYTGEISPVCLRDMNVSIVELGHAERRAIFGETDQQVARKAAAAADQGLIPLVCIGEVSTLGPIVSEA 193 (310)
T ss_dssp EEESCCCSSSSSSCTTCCCHHHHHHTTCCEEEESCHHHHHHHCCCHHHHHHHHHHHHHTTCEEEEEECCCSCCCSSHHHH
T ss_pred EEeccccccCCCCccccCCHHHHHHcCCCEEEecccccccccCCCHHHHHHHHHHHHHCCCEEEEEeCCcHHHhhhhccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCChHHHHHHHHHHHHhcCCCCCceEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhhcCCcccceeeecccC
Q 024925 185 AGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNMSQQTLPLKHVLSMEG 259 (260)
Q Consensus 185 ~g~~~~vl~~Ql~~~l~~i~~~~~iiIAYEPvWAIGTG~~aspe~iqe~~~~IR~~l~~~~~~~~a~~~~~~~~~ 259 (260)
+|++.++|.+||+++++.++.++++|||||||||||||++|+||+||++|++||++|+++|++ .+.++.|.|.|
T Consensus 194 ~g~t~~vv~~Ql~~~l~~l~~~~~vVIAYEPVWAIGTGk~Atpe~aqevh~~IR~~l~~~~~~-~a~~vrILYGG 267 (310)
T 3s6d_A 194 IGRAVGECEAQIRPVLEALPRDAPVIFAYEPVWAIGKPQPARVDHVGAVVSGIRSVIERIDRH-RKGEVRILYGG 267 (310)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTSCEEEEECCGGGC-----CCHHHHHHHHHHHHHHHHHHHTT-CSSCEEEEEEE
T ss_pred cccHHHHHHHHHHHHHhcCCcccceEEEECChhhccCCCCCCHHHHHHHHHHHHHHHHHhhhc-ccCceeEEEcC
Confidence 999999999999999999988889999999999999999999999999999999999999964 57788898876
No 23
>2v5b_A Triosephosphate isomerase; TIM, unfolding, monotctim, glycosome, gluconeogenesis, lipid synthesis, monomeric mutant, glycolysis, pentose shunt; 2.00A {Trypanosoma cruzi}
Probab=100.00 E-value=6.2e-72 Score=503.55 Aligned_cols=203 Identities=47% Similarity=0.768 Sum_probs=185.0
Q ss_pred hhhcCcceEEeecccccCHHHHHHHHHHHhhccccCCceEEEcCCcccHHHHHHHcC-CCceEeeeccccCCCccccccc
Q 024925 49 MASSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEADVDVVVAPPFVYIDQVKNSLT-DRIEIAAQNSWVGKGGAFTGEI 127 (260)
Q Consensus 49 m~~~rk~~IigNWKmn~t~~~~~~l~~~l~~~~~~~~v~VvvaPp~~~L~~v~~~~~-~~i~vgAQnv~~~~~GA~TGEI 127 (260)
|.+||+|||+||||||++.+++.+|++.+.......+++|+|||||++|..+.+.+. +++.+|||||++.+.
T Consensus 1 m~~mrk~~i~gNWKmn~~~~~~~~l~~~l~~~~~~~~vev~v~Pp~~~L~~v~~~~~~~~i~vgAQn~~~~~~------- 73 (244)
T 2v5b_A 1 MASKPQPIAAANWKCNGSESLLVPLIETLNAATFDHDVQCVVAPTFLHIPMTKARLTNPKFQIAAQNAGNADA------- 73 (244)
T ss_dssp --CCCCCEEEEEECC-----CCHHHHHHHHHCCCCSCCEEEEEECGGGHHHHHHHCCCTTEEEEESCCCCHHH-------
T ss_pred CCCCCCcEEEEECCcccCHHHHHHHHHHHHhhccccCceEEEeCcHHHHHHHHHHhcCCCceEEeccCCCCCC-------
Confidence 445799999999999999999999999997633224699999999999999999886 789999999998876
Q ss_pred CHHHHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCChHHHHHHHHHHHHhcCC--C
Q 024925 128 SVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIP--S 205 (260)
Q Consensus 128 Sa~mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pIlCIGE~leere~g~~~~vl~~Ql~~~l~~i~--~ 205 (260)
++||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++||+|+|.++|.+||+..++.++ +
T Consensus 74 -~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleereag~t~~vv~~Ql~~~l~~~~~~~ 152 (244)
T 2v5b_A 74 -LASLKDYGISWVVLGHSERRLYYGETNEIVAEKVAQACAAGFHVIVCVGETNEEREAGRTAAVVLTQLAAVAQKLSKEA 152 (244)
T ss_dssp -HHHHHHTTCCEEEECCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHTTCCTGG
T ss_pred -HHHHHHcCCCEEEeCchhhhhccCCCHHHHHHHHHHHHHCCCeEEEEcCCcHHHHhcCCHHHHHHHHHHHHHhcCCHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999886 5
Q ss_pred CCceEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhhcCCcccceeeecccC
Q 024925 206 WDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNMSQQTLPLKHVLSMEG 259 (260)
Q Consensus 206 ~~~iiIAYEPvWAIGTG~~aspe~iqe~~~~IR~~l~~~~~~~~a~~~~~~~~~ 259 (260)
+++++|||||+||||||++||||+||++|++||++|+++||++++.++.|.|.|
T Consensus 153 ~~~~vIAYEPvWAIGTG~~Atpe~aqevh~~IR~~l~~~~~~~va~~vrIlYGG 206 (244)
T 2v5b_A 153 WSRVVIAYEPVWAIGTGKVATPQQAQEVHELLRRWVRSKLGTDIAAQLRILYGG 206 (244)
T ss_dssp GGGEEEEECCHHHHSSSCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCEEEECS
T ss_pred cCCEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhcChhhcCcccEEEcC
Confidence 889999999999999999999999999999999999999999988899999987
No 24
>2jgq_A Triosephosphate isomerase; glycolysis, pentose shunt, gluconeogenesis, lipid synthesis, fatty acid biosynthesis; HET: QGA; 2.3A {Helicobacter pylori}
Probab=100.00 E-value=2e-71 Score=497.23 Aligned_cols=183 Identities=30% Similarity=0.465 Sum_probs=168.7
Q ss_pred cceEEeecccccCHHHHHHHHHHHhhccc-cCCceEEEcCCcccHHHHHHHcCCCceEeeeccccCCCcccccccCHHHH
Q 024925 54 KFFVGGNWKCNGTKESITKLVSDLNDAKL-EADVDVVVAPPFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQL 132 (260)
Q Consensus 54 k~~IigNWKmn~t~~~~~~l~~~l~~~~~-~~~v~VvvaPp~~~L~~v~~~~~~~i~vgAQnv~~~~~GA~TGEISa~mL 132 (260)
+|||+||||||++.+++.+|++.+..... ..+++|+|||||++|..+. .+++.+|||||++.+.||||||||++||
T Consensus 1 ~~~i~gNwKmn~~~~~~~~l~~~l~~~~~~~~~vev~v~Pp~~~L~~v~---~~~i~vgAQn~~~~~~GAfTGEiS~~mL 77 (233)
T 2jgq_A 1 TKIAMANFKSAMPIFKSHAYLKELEKTLKPQHFDRVFVFPDFFGLLPNS---FLHFTLGVQNAYPRDCGAFTGEITSKHL 77 (233)
T ss_dssp CCEEEEECTBCSCHHHHHHHHHHHHHHSCGGGTTTEEEECCTTTCCCSC---CSSSEECBSCCBSSSSBSCTTCCBHHHH
T ss_pred CcEEEEECCcCcCHHHHHHHHHHHHhhcccccCceEEEeCCHHHHHHhc---CCCceEEeccCCCCCCCCccCccCHHHH
Confidence 58999999999999999999999976322 2469999999999999876 4679999999999999999999999999
Q ss_pred HhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcC--ChHHHHHHHHHHHHhcCCCCCceE
Q 024925 133 KDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAG--KTFDVCFQQLKAYADAIPSWDNVV 210 (260)
Q Consensus 133 kd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pIlCIGE~leere~g--~~~~vl~~Ql~~~l~~i~~~~~ii 210 (260)
+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|++| +|.++|.+||+. +. .+ +++++
T Consensus 78 ~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~~~t~~vv~~Ql~~-l~-~~-~~~~v 154 (233)
T 2jgq_A 78 EELKIHTLLIGHSERRTLLKESPSFLKEKFDFFKSKNFKIVYCIGEELTTREKGFKAVKEFLSEQLEN-ID-LN-YPNLV 154 (233)
T ss_dssp HHTTCCEEEECCHHHHHTTCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHHCHHHHHHHHHHHHTT-SC-TT-CTTEE
T ss_pred HHcCCCEEEeCchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCchhHHHHHHHHHHh-hh-hh-ccceE
Confidence 999999999999999999999999999999999999999999999999999999 999999999997 32 23 88999
Q ss_pred EEEcccccccCCCCCCHHHHHHHHHHHHHHHH
Q 024925 211 IAYEPVWAIGTGKVATPEQAQEVHAALRDWLK 242 (260)
Q Consensus 211 IAYEPvWAIGTG~~aspe~iqe~~~~IR~~l~ 242 (260)
|||||+||||||++|+||+||++|++||++++
T Consensus 155 IAYEPvWAIGTG~~At~e~a~ev~~~IR~~l~ 186 (233)
T 2jgq_A 155 VAYEPIWAIGTKKSASLEDIYLTHGFLKQILN 186 (233)
T ss_dssp EEECCGGGTTC--CCCHHHHHHHHHHHHHHSC
T ss_pred EEEeCHHHhCCCCCCCHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999985
No 25
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=100.00 E-value=4.8e-53 Score=376.44 Aligned_cols=178 Identities=24% Similarity=0.277 Sum_probs=155.1
Q ss_pred hhhcCcceEEeecccccCH--HHHHHHHHHHhhccccCCceEEEcCCcccHHHHHHHcCCCceEeeeccccCCCcccccc
Q 024925 49 MASSNKFFVGGNWKCNGTK--ESITKLVSDLNDAKLEADVDVVVAPPFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGE 126 (260)
Q Consensus 49 m~~~rk~~IigNWKmn~t~--~~~~~l~~~l~~~~~~~~v~VvvaPp~~~L~~v~~~~~~~i~vgAQnv~~~~~GA~TGE 126 (260)
|..||+|||++|||||++. +++.+|++.+.......+++++++|||+||..+.+.+ ++.|++|||++.+.||||||
T Consensus 1 ~~~mr~~~i~~NwKmn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~v~~~~--~i~v~aQdv~~~~~Ga~TGe 78 (225)
T 1hg3_A 1 MAKLKEPIIAINFKTYIEATGKRALEIAKAAEKVYKETGVTIVVAPQLVDLRMIAESV--EIPVFAQHIDPIKPGSHTGH 78 (225)
T ss_dssp -CCCCSSEEEEECTBCGGGSHHHHHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHSC--SSCBEESCCCSCCSBSCTTC
T ss_pred CCCCCCCEEEEECcccCCCCHHHHHHHHHHHHhhccccCCcEEEeCCHHHHHHHHHhc--CCceeeeeCCcccCCCccCc
Confidence 4457999999999999874 9999999998764333579999999999999998876 68999999999999999999
Q ss_pred cCHHHHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCChHHHHHHHHHHHHhcCCCC
Q 024925 127 ISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSW 206 (260)
Q Consensus 127 ISa~mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pIlCIGE~leere~g~~~~vl~~Ql~~~l~~i~~~ 206 (260)
||+.||+|+||+||||||||||.+|+| +++|++.|+++||+||+||||++|++. +..+
T Consensus 79 is~~~l~~~Ga~~VllghseRR~~~~e----~~~k~~~A~~~GL~~ivcVge~~e~~~---------------~~~~--- 136 (225)
T 1hg3_A 79 VLPEAVKEAGAVGTLLNHSENRMILAD----LEAAIRRAEEVGLMTMVCSNNPAVSAA---------------VAAL--- 136 (225)
T ss_dssp CCHHHHHHTTCCEEEESCGGGCCBHHH----HHHHHHHHHHHTCEEEEEESSHHHHHH---------------HHTT---
T ss_pred ccHHHHHHcCCCEEEECcchhcCCHHH----HHHHHHHHHHCCCEEEEEeCCHHHHHH---------------HhcC---
Confidence 999999999999999999999999988 899999999999999999999998632 1222
Q ss_pred CceEEEEcccccccCC---CCCCHHHHHHHHHHHHHHHHhhcCCcccceeeecccC
Q 024925 207 DNVVIAYEPVWAIGTG---KVATPEQAQEVHAALRDWLKNMSQQTLPLKHVLSMEG 259 (260)
Q Consensus 207 ~~iiIAYEPvWAIGTG---~~aspe~iqe~~~~IR~~l~~~~~~~~a~~~~~~~~~ 259 (260)
...+|||||+|||||| +++++++++++|+.||++. ....+.|+|
T Consensus 137 ~~~iIayep~waiGtG~~v~t~~~d~~~~~~~~ir~~~---------~~~~ilygg 183 (225)
T 1hg3_A 137 NPDYVAVEPPELIGTGIPVSKAKPEVITNTVELVKKVN---------PEVKVLCGA 183 (225)
T ss_dssp CCSEEEECCTTTTTTSCCTTTSCTHHHHHHHHHHHHHC---------TTSEEEEES
T ss_pred CCCEEEEeChhhhccCCCCCCCChhHHHHHHHHHHhcc---------CCCEEEEeC
Confidence 2348999999999999 8999999999999999863 245667766
No 26
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=100.00 E-value=2.8e-52 Score=371.85 Aligned_cols=175 Identities=27% Similarity=0.330 Sum_probs=152.9
Q ss_pred cCcceEEeecccccCH--HHHHHHHHHHhhccccCCceEEEcCCcccHHHHHHHcCCCceEeeeccccCCCcccccccCH
Q 024925 52 SNKFFVGGNWKCNGTK--ESITKLVSDLNDAKLEADVDVVVAPPFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISV 129 (260)
Q Consensus 52 ~rk~~IigNWKmn~t~--~~~~~l~~~l~~~~~~~~v~VvvaPp~~~L~~v~~~~~~~i~vgAQnv~~~~~GA~TGEISa 129 (260)
||+|||+||||||++. +++.+|++.+.+.....+++++++|||+||..+.+.+ ++.|++|||++.+.||||||||+
T Consensus 1 mr~~~i~~NwKmn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~L~~v~~~~--~i~v~aQdv~~~~~Ga~TGeis~ 78 (226)
T 1w0m_A 1 MRLPILIINFKAYGEAAGKRAVELAKAAERAARELGVNIVVAPNHLELGLVSQSV--DIPVYAQGADVEAGGAHTAHVSL 78 (226)
T ss_dssp CCSSEEEEECTBCGGGSTHHHHHHHHHHHHHHHHHTCEEEEECCGGGHHHHHTTC--SSCBEESCCSBSSCSSCTTCCBH
T ss_pred CCCCEEEEECcccCCCCHHHHHHHHHHHHhcccccCCcEEEeCCHHHHHHHHHhc--CCceEeeECChhhCCCccCCCCH
Confidence 5899999999999875 9999999998764323469999999999999998765 68999999999999999999999
Q ss_pred HHHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCChHHHHHHHHHHHHhcCCCCCce
Q 024925 130 EQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNV 209 (260)
Q Consensus 130 ~mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pIlCIGE~leere~g~~~~vl~~Ql~~~l~~i~~~~~i 209 (260)
.||+|+||+||||||||||.+|+| +++|++.|+++||+||+||||++|++. + ..+ ...
T Consensus 79 ~~l~~~Ga~~VllghseRR~~~~e----~~~k~~~A~~~GL~~ivcVge~~e~~~--------------~-~~~---~~~ 136 (226)
T 1w0m_A 79 ENIKEAGGSGVILNHSEAPLKLND----LARLVAKAKSLGLDVVVCAPDPRTSLA--------------A-AAL---GPH 136 (226)
T ss_dssp HHHHHHTCCEEEECCTTSCCBHHH----HHHHHHHHHHTTCEEEEEESSHHHHHH--------------H-HHT---CCS
T ss_pred HHHHHcCCCEEEEeeeeccCCHHH----HHHHHHHHHHCCCEEEEEeCCHHHHHH--------------H-hcC---CCC
Confidence 999999999999999999999988 899999999999999999999998531 1 122 234
Q ss_pred EEEEcccccccCC---CCCCHHHHHHHHHHHHHHHHhhcCCcccceeeecccC
Q 024925 210 VIAYEPVWAIGTG---KVATPEQAQEVHAALRDWLKNMSQQTLPLKHVLSMEG 259 (260)
Q Consensus 210 iIAYEPvWAIGTG---~~aspe~iqe~~~~IR~~l~~~~~~~~a~~~~~~~~~ 259 (260)
+|||||+|||||| +++++++++++|+.||++. ....+.|+|
T Consensus 137 iIayep~waiGtG~~v~t~~~d~~~~~~~~ir~~~---------~~~~ilygg 180 (226)
T 1w0m_A 137 AVAVEPPELIGTGRAVSRYKPEAIVETVGLVSRHF---------PEVSVITGA 180 (226)
T ss_dssp EEEECCGGGTTTSCCHHHHCHHHHHHHHHHHHHHC---------TTSEEEEES
T ss_pred EEEEcChhhhccCCCCCCCChhHHHHHHHHHHhcc---------CCCEEEEeC
Confidence 8999999999999 7899999999999999863 245667765
No 27
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=1.9e-40 Score=292.20 Aligned_cols=161 Identities=27% Similarity=0.369 Sum_probs=130.9
Q ss_pred eEEeecccccCH--HHHHHHHHHHhhccccCCceEEEcCCcccHHHHHHHcCCCceEeeeccccCCCcccccccCHHHHH
Q 024925 56 FVGGNWKCNGTK--ESITKLVSDLNDAKLEADVDVVVAPPFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLK 133 (260)
Q Consensus 56 ~IigNWKmn~t~--~~~~~l~~~l~~~~~~~~v~VvvaPp~~~L~~v~~~~~~~i~vgAQnv~~~~~GA~TGEISa~mLk 133 (260)
||++|||||++. +++.+|++.+.......+++++++||+++|..+++.+ ++.|++||+++.++|+||||+|++|++
T Consensus 2 ~i~~NwKm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~v~~~~--~~~v~aqd~~~~~~ga~tGei~~~~~~ 79 (219)
T 2h6r_A 2 VIVINYKTYNESIGNRGLEIAKIAEKVSEESGITIGVAPQFVDLRMIVENV--NIPVYAQHIDNINPGSHTGHILAEAIK 79 (219)
T ss_dssp CEEEECTTCGGGSTHHHHHHHHHHHHHHHHHTCCEEEECCTTTHHHHHHHC--CSCBEESCCCSCCSBSCTTCCCHHHHH
T ss_pred EEEEECccCCCCCHHHHHHHHHHHHhcccccCCcEEEECCHHHHHHHHHHc--CCcEEEEECChhhcCCccCchHHHHHH
Confidence 899999999875 9999999998764222468999999999999998876 688999999999999999999999999
Q ss_pred hcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCChHHHHHHHHHHHHhcCCCCCceEEEE
Q 024925 134 DIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAY 213 (260)
Q Consensus 134 d~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pIlCIGE~leere~g~~~~vl~~Ql~~~l~~i~~~~~iiIAY 213 (260)
++||++|+|||||||..++| +++|++.|++.||.||+||+++.+.+. + ..+ ...+|+|
T Consensus 80 ~~Gad~Vll~~ser~l~~~e----~~~~~~~a~~~Gl~~iv~v~~~~e~~~-----------~----~~~---~~~~i~~ 137 (219)
T 2h6r_A 80 DCGCKGTLINHSEKRMLLAD----IEAVINKCKNLGLETIVCTNNINTSKA-----------V----AAL---SPDCIAV 137 (219)
T ss_dssp HHTCCEEEESBTTBCCBHHH----HHHHHHHHHHHTCEEEEEESSSHHHHH-----------H----TTT---CCSEEEE
T ss_pred HcCCCEEEECCccccCCHHH----HHHHHHHHHHCCCeEEEEeCCchHHHH-----------H----HhC---CCCEEEE
Confidence 99999999999999999877 788889999999999999999986432 1 112 2248999
Q ss_pred cccccccCC---CCCCHHHHHHHHHHHHHH
Q 024925 214 EPVWAIGTG---KVATPEQAQEVHAALRDW 240 (260)
Q Consensus 214 EPvWAIGTG---~~aspe~iqe~~~~IR~~ 240 (260)
||+|+|||| +++++++++++++.||+.
T Consensus 138 ~~~~~iGtG~~~~t~~~~~~~~~~~~ir~~ 167 (219)
T 2h6r_A 138 EPPELIGTGIPVSKANPEVVEGTVRAVKEI 167 (219)
T ss_dssp CCCC--------------CSHHHHHHHHHH
T ss_pred EeccccccCCCCccCCHHHHHHHHHHHHhc
Confidence 999999999 899999899999999986
No 28
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=98.95 E-value=3e-09 Score=97.38 Aligned_cols=115 Identities=15% Similarity=0.043 Sum_probs=86.7
Q ss_pred CCceEeeeccccCCCcccccccCHHHHHhcCCCEEEeeec--------------ccccccCCCHHHHHHHHHHHHHCCCe
Q 024925 106 DRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHS--------------ERRHVIGEDDQFIGKKAAYALSEGLG 171 (260)
Q Consensus 106 ~~i~vgAQnv~~~~~GA~TGEISa~mLkd~G~~~viIGHS--------------ERR~~f~Etd~~I~~Kv~~Al~~gL~ 171 (260)
.++.|.|| ++..++|.+||.+- +.||++|+..| +||| |+|.-|.+-.+.| +.|.+.||.
T Consensus 93 ~~iPV~Ag-v~~~DP~~~~g~~L-e~lk~~Gf~Gv-~N~ptvglidG~fr~~LEE~gm~~~~eve~I----~~A~~~gL~ 165 (286)
T 2p10_A 93 RHTPVLAG-VNGTDPFMVMSTFL-RELKEIGFAGV-QNFPTVGLIDGLFRQNLEETGMSYAQEVEMI----AEAHKLDLL 165 (286)
T ss_dssp SSSCEEEE-ECTTCTTCCHHHHH-HHHHHHTCCEE-EECSCGGGCCHHHHHHHHHTTCCHHHHHHHH----HHHHHTTCE
T ss_pred CCCCEEEE-ECCcCCCcCHHHHH-HHHHHhCCceE-EECCCcccccchhhhhHhhcCCCHHHHHHHH----HHHHHCCCe
Confidence 57889999 99999999999999 99999999999 9999 9999888766666 889999999
Q ss_pred EEEEeCCcHHHHhcCChHHHHHHHHHHHHhcCCCCCceEEEEccc----ccccCCCCCCHHHHHHHHHHHHHHHHhhc
Q 024925 172 VIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPV----WAIGTGKVATPEQAQEVHAALRDWLKNMS 245 (260)
Q Consensus 172 pIlCIGE~leere~g~~~~vl~~Ql~~~l~~i~~~~~iiIAYEPv----WAIGTG~~aspe~iqe~~~~IR~~l~~~~ 245 (260)
.++|+-...+.+ +..+.-++ +|+.||. ..||+|.+.+.++..+.++.|.+..++..
T Consensus 166 Ti~~v~~~eeA~--------------amA~agpD----iI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vn 225 (286)
T 2p10_A 166 TTPYVFSPEDAV--------------AMAKAGAD----ILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIR 225 (286)
T ss_dssp ECCEECSHHHHH--------------HHHHHTCS----EEEEECSCC---------CCCHHHHHHHHHHHHHHHHHHC
T ss_pred EEEecCCHHHHH--------------HHHHcCCC----EEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhC
Confidence 999999887644 33333345 8999999 69999988776665455555555554443
No 29
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=94.72 E-value=0.43 Score=42.48 Aligned_cols=112 Identities=10% Similarity=0.107 Sum_probs=77.5
Q ss_pred CcceEEeecccc----cC---HHHHHHHHHHHhhccccCCceEE-----EcCCcccHHHHHHHcCCCceEeeeccccCCC
Q 024925 53 NKFFVGGNWKCN----GT---KESITKLVSDLNDAKLEADVDVV-----VAPPFVYIDQVKNSLTDRIEIAAQNSWVGKG 120 (260)
Q Consensus 53 rk~~IigNWKmn----~t---~~~~~~l~~~l~~~~~~~~v~Vv-----vaPp~~~L~~v~~~~~~~i~vgAQnv~~~~~ 120 (260)
+++.||+|.|-+ |. .....++++...+. ...+.|+ +..++.+|..+.+.. ++.|-.|| +
T Consensus 39 ~~~~vIaE~K~aSPSkG~i~~~~~~~~iA~~y~~~--A~~IsVlTd~~~F~gs~~dL~~ir~~v--~lPvLrKD-----f 109 (251)
T 1i4n_A 39 ERVKIIAEFKKASPSAGDINADASLEDFIRMYDEL--ADAISILTEKHYFKGDPAFVRAARNLT--CRPILAKD-----F 109 (251)
T ss_dssp SSCEEEEEECSBCSSSCBSCTTCCHHHHHHHHHHH--CSEEEEECCCSSSCCCTHHHHHHHTTC--CSCEEEEC-----C
T ss_pred CCceEEEeecCCCCCCCccCCCCCHHHHHHHHHHh--CCceEEEecccccCCCHHHHHHHHHhC--CCCEEEee-----C
Confidence 447899999965 21 01334455544443 2345554 678999999998765 46677787 2
Q ss_pred cccccccCHHHHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCcHH
Q 024925 121 GAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQ 181 (260)
Q Consensus 121 GA~TGEISa~mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pIlCIGE~le 181 (260)
+ .++.- ...++++|++.|++-|+-+. ++.+..=++.|.+.||.+++|+-...|
T Consensus 110 i-~~~~q-i~ea~~~GAD~ilLi~a~l~------~~~l~~l~~~a~~lGl~~lvEv~~~eE 162 (251)
T 1i4n_A 110 Y-IDTVQ-VKLASSVGADAILIIARILT------AEQIKEIYEAAEELGMDSLVEVHSRED 162 (251)
T ss_dssp C-CSTHH-HHHHHHTTCSEEEEEGGGSC------HHHHHHHHHHHHTTTCEEEEEECSHHH
T ss_pred C-CCHHH-HHHHHHcCCCEEEEecccCC------HHHHHHHHHHHHHcCCeEEEEeCCHHH
Confidence 3 33333 45599999999999999432 255666678899999999999996654
No 30
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=87.84 E-value=1.9 Score=38.96 Aligned_cols=97 Identities=18% Similarity=0.270 Sum_probs=66.2
Q ss_pred cCCCcccccc---cCHHHHHh--cCCCEEEe-eecccccccCCCHHHHHHHHHHHHHCCCeEE-EEeCCcHHHHhcCChH
Q 024925 117 VGKGGAFTGE---ISVEQLKD--IGCKWVVL-GHSERRHVIGEDDQFIGKKAAYALSEGLGVI-ACIGEQLQEREAGKTF 189 (260)
Q Consensus 117 ~~~~GA~TGE---ISa~mLkd--~G~~~viI-GHSERR~~f~Etd~~I~~Kv~~Al~~gL~pI-lCIGE~leere~g~~~ 189 (260)
+...|+||-| ..+.+.++ .|.+|+=+ =|+|+|.++.+..+.+ +.++...+.|++++ +|+......|
T Consensus 78 pNTag~~ta~eAv~~a~lare~~~~~~~iKlEv~~d~~~llpD~~~tv-~aa~~L~~~Gf~Vlpy~~dd~~~ak------ 150 (265)
T 1wv2_A 78 PNTAGCYDAVEAVRTCRLARELLDGHNLVKLEVLADQKTLFPNVVETL-KAAEQLVKDGFDVMVYTSDDPIIAR------ 150 (265)
T ss_dssp EECTTCCSHHHHHHHHHHHHTTTTSCCEEEECCBSCTTTCCBCHHHHH-HHHHHHHTTTCEEEEEECSCHHHHH------
T ss_pred CcCCCCCCHHHHHHHHHHHHHHcCCCCeEEEEeecCccccCcCHHHHH-HHHHHHHHCCCEEEEEeCCCHHHHH------
Confidence 4567999987 45677777 57788855 5899999998877766 55667777899999 8999876422
Q ss_pred HHHHHHHHHHHhcCCCCCceEEEEcc-cccccCCCC-CCHHHHHHHH
Q 024925 190 DVCFQQLKAYADAIPSWDNVVIAYEP-VWAIGTGKV-ATPEQAQEVH 234 (260)
Q Consensus 190 ~vl~~Ql~~~l~~i~~~~~iiIAYEP-vWAIGTG~~-aspe~iqe~~ 234 (260)
.+. .+. ..+| +| ---||||+. .+++.++.++
T Consensus 151 -----rl~----~~G---~~aV--mPlg~pIGsG~Gi~~~~lI~~I~ 183 (265)
T 1wv2_A 151 -----QLA----EIG---CIAV--MPLAGLIGSGLGICNPYNLRIIL 183 (265)
T ss_dssp -----HHH----HSC---CSEE--EECSSSTTCCCCCSCHHHHHHHH
T ss_pred -----HHH----HhC---CCEE--EeCCccCCCCCCcCCHHHHHHHH
Confidence 122 221 1133 77 344999974 4777764443
No 31
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=83.59 E-value=2.5 Score=37.67 Aligned_cols=50 Identities=20% Similarity=0.214 Sum_probs=39.4
Q ss_pred ccCHHHHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEEE-EeCCcHHHH
Q 024925 126 EISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIA-CIGEQLQER 183 (260)
Q Consensus 126 EISa~mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pIl-CIGE~leer 183 (260)
|-=.+.+++.|++++||-+ .-+.|.++.. +.+.++||.+|. |.-.+.++|
T Consensus 106 e~F~~~~~~aGvdG~IipD----LP~eE~~~~~----~~~~~~Gl~~I~lvaP~t~~eR 156 (252)
T 3tha_A 106 EKFVKKAKSLGICALIVPE----LSFEESDDLI----KECERYNIALITLVSVTTPKER 156 (252)
T ss_dssp HHHHHHHHHTTEEEEECTT----CCGGGCHHHH----HHHHHTTCEECEEEETTSCHHH
T ss_pred HHHHHHHHHcCCCEEEeCC----CCHHHHHHHH----HHHHHcCCeEEEEeCCCCcHHH
Confidence 3346889999999999999 4567877777 778999999887 666665555
No 32
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=76.48 E-value=13 Score=33.15 Aligned_cols=89 Identities=18% Similarity=0.165 Sum_probs=52.1
Q ss_pred ccCHHHHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEE-EEeCCcHHHHhcCChHHHHHHHHHHHHhcCC
Q 024925 126 EISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI-ACIGEQLQEREAGKTFDVCFQQLKAYADAIP 204 (260)
Q Consensus 126 EISa~mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pI-lCIGE~leere~g~~~~vl~~Ql~~~l~~i~ 204 (260)
|-=++.+++.|++.+|+. -.-+.|.++.+ +.+.++|+.+| +|.-.+.++| ++.+.+.-+
T Consensus 115 ~~f~~~~~~aGvdGvIip----Dlp~ee~~~~~----~~~~~~gl~~I~lvap~t~~er------------i~~i~~~~~ 174 (271)
T 3nav_A 115 DDFYQRCQKAGVDSVLIA----DVPTNESQPFV----AAAEKFGIQPIFIAPPTASDET------------LRAVAQLGK 174 (271)
T ss_dssp HHHHHHHHHHTCCEEEET----TSCGGGCHHHH----HHHHHTTCEEEEEECTTCCHHH------------HHHHHHHCC
T ss_pred HHHHHHHHHCCCCEEEEC----CCCHHHHHHHH----HHHHHcCCeEEEEECCCCCHHH------------HHHHHHHCC
Confidence 444889999999999995 34456666666 77999999977 6666665555 333333222
Q ss_pred CCCceEEEEccccccc-CCCC-CCHHHHHHHHHHHHHH
Q 024925 205 SWDNVVIAYEPVWAIG-TGKV-ATPEQAQEVHAALRDW 240 (260)
Q Consensus 205 ~~~~iiIAYEPvWAIG-TG~~-aspe~iqe~~~~IR~~ 240 (260)
. +|.|-. ..| ||.. ..++.+.+..+.||+.
T Consensus 175 g----fiY~vs--~~GvTG~~~~~~~~~~~~v~~vr~~ 206 (271)
T 3nav_A 175 G----YTYLLS--RAGVTGAETKANMPVHALLERLQQF 206 (271)
T ss_dssp S----CEEECC--CC--------CCHHHHHHHHHHHHT
T ss_pred C----eEEEEe--ccCCCCcccCCchhHHHHHHHHHHh
Confidence 2 233333 444 4543 2345566666666664
No 33
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=75.60 E-value=24 Score=30.37 Aligned_cols=100 Identities=11% Similarity=0.050 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHhhccccCCceEEEcCCcccHHHHHHHcCCCceEeeeccccCCCcc---ccccc--CHHHHHhcCCCEEE
Q 024925 67 KESITKLVSDLNDAKLEADVDVVVAPPFVYIDQVKNSLTDRIEIAAQNSWVGKGGA---FTGEI--SVEQLKDIGCKWVV 141 (260)
Q Consensus 67 ~~~~~~l~~~l~~~~~~~~v~VvvaPp~~~L~~v~~~~~~~i~vgAQnv~~~~~GA---~TGEI--Sa~mLkd~G~~~vi 141 (260)
.....++++...+. +..-+.+.+.-+|..+++.. ++.|-+++-. ++|. |.+.. -...+++.|++.|+
T Consensus 35 ~~~~~~~A~a~~~~----Ga~~i~~~~~~~i~~ir~~v--~~Pvig~~k~--d~~~~~~~I~~~~~~i~~~~~~Gad~V~ 106 (232)
T 3igs_A 35 PEIVAAMALAAEQA----GAVAVRIEGIDNLRMTRSLV--SVPIIGIIKR--DLDESPVRITPFLDDVDALAQAGAAIIA 106 (232)
T ss_dssp HHHHHHHHHHHHHT----TCSEEEEESHHHHHHHHTTC--CSCEEEECBC--CCSSCCCCBSCSHHHHHHHHHHTCSEEE
T ss_pred cchHHHHHHHHHHC----CCeEEEECCHHHHHHHHHhc--CCCEEEEEee--cCCCcceEeCccHHHHHHHHHcCCCEEE
Confidence 34556666655442 33334446677888877665 4555556543 3343 32322 35789999999999
Q ss_pred eeecccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCc
Q 024925 142 LGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQ 179 (260)
Q Consensus 142 IGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pIlCIGE~ 179 (260)
++.+-+..- ++...+ ++.+.+.|+.+++.+...
T Consensus 107 l~~~~~~~p--~~l~~~---i~~~~~~g~~v~~~v~t~ 139 (232)
T 3igs_A 107 VDGTARQRP--VAVEAL---LARIHHHHLLTMADCSSV 139 (232)
T ss_dssp EECCSSCCS--SCHHHH---HHHHHHTTCEEEEECCSH
T ss_pred ECccccCCH--HHHHHH---HHHHHHCCCEEEEeCCCH
Confidence 999865322 222222 355667799888877643
No 34
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=73.55 E-value=8 Score=34.61 Aligned_cols=81 Identities=10% Similarity=0.229 Sum_probs=56.7
Q ss_pred ceEEEcCCcc-----cHHHHHHHcCCCceEeeeccccCCCcccccccCHHHHHhcCCCEEEeeecccccccCCCHHHHHH
Q 024925 86 VDVVVAPPFV-----YIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGK 160 (260)
Q Consensus 86 v~VvvaPp~~-----~L~~v~~~~~~~i~vgAQnv~~~~~GA~TGEISa~mLkd~G~~~viIGHSERR~~f~Etd~~I~~ 160 (260)
+.|+--|.|. +|..+.+.. ++.|-.++.- +=+.-...++++|++.|+++++-. +++.+..
T Consensus 96 IsVltd~~~f~Gs~~~L~~ir~~v--~lPVl~Kdfi-------~d~~qi~ea~~~GAD~VlLi~a~L------~~~~l~~ 160 (272)
T 3tsm_A 96 LSVLTDTPSFQGAPEFLTAARQAC--SLPALRKDFL-------FDPYQVYEARSWGADCILIIMASV------DDDLAKE 160 (272)
T ss_dssp EEEECCSTTTCCCHHHHHHHHHTS--SSCEEEESCC-------CSTHHHHHHHHTTCSEEEEETTTS------CHHHHHH
T ss_pred EEEeccccccCCCHHHHHHHHHhc--CCCEEECCcc-------CCHHHHHHHHHcCCCEEEEccccc------CHHHHHH
Confidence 4555555544 787777664 4555555521 112246678999999999999943 4566777
Q ss_pred HHHHHHHCCCeEEEEeCCcHH
Q 024925 161 KAAYALSEGLGVIACIGEQLQ 181 (260)
Q Consensus 161 Kv~~Al~~gL~pIlCIGE~le 181 (260)
=+..|.+.||.+++|+-...|
T Consensus 161 l~~~a~~lGl~~lvevh~~eE 181 (272)
T 3tsm_A 161 LEDTAFALGMDALIEVHDEAE 181 (272)
T ss_dssp HHHHHHHTTCEEEEEECSHHH
T ss_pred HHHHHHHcCCeEEEEeCCHHH
Confidence 778899999999999975544
No 35
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=72.42 E-value=7.3 Score=35.15 Aligned_cols=96 Identities=18% Similarity=0.160 Sum_probs=58.5
Q ss_pred cCCCcccc---cccCHHHHHhc-CCCEE-EeeecccccccCCCHHHHHHHHHHHHHCCCeEE-EEeCCcHHHHhcCChHH
Q 024925 117 VGKGGAFT---GEISVEQLKDI-GCKWV-VLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI-ACIGEQLQEREAGKTFD 190 (260)
Q Consensus 117 ~~~~GA~T---GEISa~mLkd~-G~~~v-iIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pI-lCIGE~leere~g~~~~ 190 (260)
+...|++| ..-.+++-+|+ |.+|+ |==|+|+|.++-+..+.+ ++.+...+.|++++ +|......
T Consensus 68 pntaG~~taeeAv~~a~lare~~gt~~iKlEvi~d~~~l~pD~~~tv-~aa~~L~k~Gf~Vlpy~~~D~~~--------- 137 (268)
T 2htm_A 68 PNTAGARTAEEAVRLARLGRLLTGERWVKLEVIPDPTYLLPDPLETL-KAAERLIEEDFLVLPYMGPDLVL--------- 137 (268)
T ss_dssp EBCTTCCSHHHHHHHHHHHHHHHCCSEEBCCCCSCTTTTCCCHHHHH-HHHHHHHHTTCEECCEECSCHHH---------
T ss_pred CcccCCCCHHHHHHHHHhhhHhcCcceeeeeeccCccccCcCHHHHH-HHHHHHHHCCCEEeeccCCCHHH---------
Confidence 45678888 55556666654 55565 334778887776666655 56667777899999 89754432
Q ss_pred HHHHHHHHHHhcCCCCCceEEEEcc-cccccCCCC-CCHHHHHHH
Q 024925 191 VCFQQLKAYADAIPSWDNVVIAYEP-VWAIGTGKV-ATPEQAQEV 233 (260)
Q Consensus 191 vl~~Ql~~~l~~i~~~~~iiIAYEP-vWAIGTG~~-aspe~iqe~ 233 (260)
.+.+..+ . ++ +| +| .-.||||+. .+|+.++.+
T Consensus 138 --ak~l~~~-G--~~----aV--mPlg~pIGsG~Gi~~~~~L~~i 171 (268)
T 2htm_A 138 --AKRLAAL-G--TA----TV--MPLAAPIGSGWGVRTRALLELF 171 (268)
T ss_dssp --HHHHHHH-T--CS----CB--EEBSSSTTTCCCSTTHHHHHHH
T ss_pred --HHHHHhc-C--CC----EE--EecCccCcCCcccCCHHHHHHH
Confidence 2223331 1 11 22 88 445999985 466664443
No 36
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=72.10 E-value=32 Score=29.52 Aligned_cols=100 Identities=15% Similarity=0.073 Sum_probs=59.1
Q ss_pred HHHHHHHHHHhhccccCCceEEEcCCcccHHHHHHHcCCCceEeeeccccCCCcc---ccccc--CHHHHHhcCCCEEEe
Q 024925 68 ESITKLVSDLNDAKLEADVDVVVAPPFVYIDQVKNSLTDRIEIAAQNSWVGKGGA---FTGEI--SVEQLKDIGCKWVVL 142 (260)
Q Consensus 68 ~~~~~l~~~l~~~~~~~~v~VvvaPp~~~L~~v~~~~~~~i~vgAQnv~~~~~GA---~TGEI--Sa~mLkd~G~~~viI 142 (260)
....++++...+. +..-+-+.+.-+|..+++.. ++.|-+++-. +.|. |-+.. -...+++.|++.|++
T Consensus 36 ~~~~~~A~a~~~~----Ga~~i~~~~~~~i~~ir~~v--~~Pvig~~k~--~~~~~~~~I~~~~~~i~~~~~aGad~I~l 107 (229)
T 3q58_A 36 EIVAAMAQAAASA----GAVAVRIEGIENLRTVRPHL--SVPIIGIIKR--DLTGSPVRITPYLQDVDALAQAGADIIAF 107 (229)
T ss_dssp HHHHHHHHHHHHT----TCSEEEEESHHHHHHHGGGC--CSCEEEECBC--CCSSCCCCBSCSHHHHHHHHHHTCSEEEE
T ss_pred chHHHHHHHHHHC----CCcEEEECCHHHHHHHHHhc--CCCEEEEEee--cCCCCceEeCccHHHHHHHHHcCCCEEEE
Confidence 4455566555432 22323345677777777664 4666666543 3333 33332 357899999999999
Q ss_pred eecccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCcH
Q 024925 143 GHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQL 180 (260)
Q Consensus 143 GHSERR~~f~Etd~~I~~Kv~~Al~~gL~pIlCIGE~l 180 (260)
+.+-+... ++...+ ++.+.+.|+.++..+....
T Consensus 108 ~~~~~~~p--~~l~~~---i~~~~~~g~~v~~~v~t~e 140 (229)
T 3q58_A 108 DASFRSRP--VDIDSL---LTRIRLHGLLAMADCSTVN 140 (229)
T ss_dssp ECCSSCCS--SCHHHH---HHHHHHTTCEEEEECSSHH
T ss_pred CccccCCh--HHHHHH---HHHHHHCCCEEEEecCCHH
Confidence 99865322 222222 3556677999888876443
No 37
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=70.84 E-value=15 Score=32.61 Aligned_cols=50 Identities=14% Similarity=0.147 Sum_probs=36.8
Q ss_pred ccCHHHHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEE-EEeCCcHHHH
Q 024925 126 EISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI-ACIGEQLQER 183 (260)
Q Consensus 126 EISa~mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pI-lCIGE~leer 183 (260)
|-=.+.+++.|++++|+. -.-+.|.++.+ +.+.++|+.+| +|--.+.++|
T Consensus 113 e~f~~~~~~aGvdgvii~----Dlp~ee~~~~~----~~~~~~gl~~i~liaP~t~~er 163 (267)
T 3vnd_A 113 DEFYTKAQAAGVDSVLIA----DVPVEESAPFS----KAAKAHGIAPIFIAPPNADADT 163 (267)
T ss_dssp HHHHHHHHHHTCCEEEET----TSCGGGCHHHH----HHHHHTTCEEECEECTTCCHHH
T ss_pred HHHHHHHHHcCCCEEEeC----CCCHhhHHHHH----HHHHHcCCeEEEEECCCCCHHH
Confidence 444789999999999994 33455666666 77999999988 6666665444
No 38
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti}
Probab=68.82 E-value=34 Score=32.96 Aligned_cols=117 Identities=19% Similarity=0.170 Sum_probs=65.7
Q ss_pred cccccc---cCHH----HHHhcCCCE--EE--eeeccc--ccccCCCHH--HHHHHHHHHHHCCCeEEE------EeCCc
Q 024925 121 GAFTGE---ISVE----QLKDIGCKW--VV--LGHSER--RHVIGEDDQ--FIGKKAAYALSEGLGVIA------CIGEQ 179 (260)
Q Consensus 121 GA~TGE---ISa~----mLkd~G~~~--vi--IGHSER--R~~f~Etd~--~I~~Kv~~Al~~gL~pIl------CIGE~ 179 (260)
|-|||- .=.. +.++.|+.. |+ +-|-.- -+...+..+ .--.-++.|+++|++.|- |.+|+
T Consensus 61 gGYtG~~p~~f~~~V~~~A~~~~vPv~pV~LhlDHg~~~~w~~~~~~~am~~a~e~i~~aI~AGFtSVMiD~S~~p~eeN 140 (450)
T 3txv_A 61 GGYTGMTPEDFTRFVGAIADRIEFPREKILLGGDHLGPNPWKHLPADEAMAKAEAMITAYAKAGFTKLHLDTSMGCAGEP 140 (450)
T ss_dssp CTTTTCCHHHHHHHHHHHHHHTTCCGGGEEEEEEEESSGGGTTSCHHHHHHHHHHHHHHHHTTTCCEEEECCCBCCSSSC
T ss_pred CCCCCCCHHHHHHHHHHHHHHcCcCcccEEEECCCCCCcccccccHHHHHHHHHHHHHHHHHcCCCEEEECCCCCchhhc
Confidence 779882 2223 345568884 33 336532 221111111 112334889999999985 66665
Q ss_pred HHHHhcCChHHHHHHHHHHHHhcCC-CCCceEEEEcccccccCC--------------CCCCHHHHHHHHHHHHHHHHh
Q 024925 180 LQEREAGKTFDVCFQQLKAYADAIP-SWDNVVIAYEPVWAIGTG--------------KVATPEQAQEVHAALRDWLKN 243 (260)
Q Consensus 180 leere~g~~~~vl~~Ql~~~l~~i~-~~~~iiIAYEPvWAIGTG--------------~~aspe~iqe~~~~IR~~l~~ 243 (260)
. -.|.+++.+..+.+.+.-. .+..+-.. ||..-|||- ...+|+++.+.++.-++.+.+
T Consensus 141 i-----~lt~evva~rtaeL~~~A~~~~~~~g~~-e~~yviGtEvpvpGGa~~~~~~~~~T~PeeA~~fv~~~~~~f~~ 213 (450)
T 3txv_A 141 T-----ALPDATTAARAARLAAVAEDAVGGRGGV-LPVYIIGTEVPIPGGALEELDTLEVTAPEAAIETVRVHRAAFEE 213 (450)
T ss_dssp S-----BCCHHHHHHHHHHHHHHHHHTC-------CCEEEEECC-------------CCCCCHHHHHHHHHHHHHHHHH
T ss_pred c-----chhHHHHHHHHHHHHHHHHHHHhhcCCC-CceEEeeeecCCCCccccccccCCCCCHHHHHHHHHHHHHHHHH
Confidence 3 3577787666655543221 11111112 788889982 247899998888877777663
No 39
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A
Probab=68.72 E-value=60 Score=28.43 Aligned_cols=20 Identities=35% Similarity=0.301 Sum_probs=16.3
Q ss_pred HHHHHHHHHHCCCeEEEEeC
Q 024925 158 IGKKAAYALSEGLGVIACIG 177 (260)
Q Consensus 158 I~~Kv~~Al~~gL~pIlCIG 177 (260)
+.+=+..|.++||.+|+.+-
T Consensus 97 ld~~v~~a~~~Gi~vild~h 116 (358)
T 1ece_A 97 MDKIVAYAGQIGLRIILDRH 116 (358)
T ss_dssp HHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHCCCEEEEecC
Confidence 44456889999999999884
No 40
>4h41_A Putative alpha-L-fucosidase; hydrolase, carbohydrate metabolism, HOST glycans, structural genomics; HET: MSE 1PE PE4 PG4 PG6; 1.80A {Bacteroides thetaiotaomicron}
Probab=67.59 E-value=21 Score=32.95 Aligned_cols=87 Identities=11% Similarity=0.028 Sum_probs=51.2
Q ss_pred HHHHHhcCCCEEEe---eeccccc----------ccCCCHHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCChH---HHH
Q 024925 129 VEQLKDIGCKWVVL---GHSERRH----------VIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTF---DVC 192 (260)
Q Consensus 129 a~mLkd~G~~~viI---GHSERR~----------~f~Etd~~I~~Kv~~Al~~gL~pIlCIGE~leere~g~~~---~vl 192 (260)
..++|++|++|||+ ||-..-. ...-..+.|..=+..|-++||++.+.+.-+...-..+... +..
T Consensus 60 ~~~mK~~GikyvIl~~~~~~gf~~~pS~~~~~~~~~~p~~Dlv~~~l~aa~k~Gmkv~~Gly~S~~~W~~~d~~~e~e~~ 139 (340)
T 4h41_A 60 FQHMKRIGIDTVIMIRSGYRKFMTYPSPYLLKKGCYMPSVDLVDMYLRLAEKYNMKFYFGLYDSGRYWDTGDLSWEIEDN 139 (340)
T ss_dssp HHHHHHTTCCEEEESCSEETTEESSCCHHHHHTTCCCCSBCHHHHHHHHHHHTTCEEEEECCBCSHHHHHSCGGGGHHHH
T ss_pred HHHHHHcCCCEEEEEEEeeCCeeccCcccccccCccCCcccHHHHHHHHHHHhCCeEEEecCCChhhcCCCCHHHHHHHH
Confidence 56889999999998 5532211 1111234577778999999999988877554443333321 222
Q ss_pred HHHHHHHHhcC----CCCCceEEEEcc
Q 024925 193 FQQLKAYADAI----PSWDNVVIAYEP 215 (260)
Q Consensus 193 ~~Ql~~~l~~i----~~~~~iiIAYEP 215 (260)
...+..+.... +...--+|-||+
T Consensus 140 ~~~i~El~~~Yg~~h~af~GWYi~~Ei 166 (340)
T 4h41_A 140 KYVIDEVWKMYGEKYKSFGGWYISGEI 166 (340)
T ss_dssp HHHHHHHHHHTTTTCTTEEEEEECCCC
T ss_pred HHHHHHHHHHhhccCCCeeEEEecccc
Confidence 22233333322 234456788997
No 41
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=64.90 E-value=24 Score=30.42 Aligned_cols=30 Identities=7% Similarity=0.059 Sum_probs=17.8
Q ss_pred ceEEEEcccccccCCCCCCHHHHHHHHHHH
Q 024925 208 NVVIAYEPVWAIGTGKVATPEQAQEVHAAL 237 (260)
Q Consensus 208 ~iiIAYEPvWAIGTG~~aspe~iqe~~~~I 237 (260)
.|.|++||.+--.+....+++++.++.+.+
T Consensus 164 gv~l~lEn~~~~~~~~~~~~~~~~~l~~~v 193 (309)
T 2hk0_A 164 GINLCIEVLNRFENHVLNTAAEGVAFVKDV 193 (309)
T ss_dssp TCEEEEECCCTTTCSSCCSHHHHHHHHHHH
T ss_pred CCEEEEeecccccccccCCHHHHHHHHHHc
Confidence 467888887533334456677666555443
No 42
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A*
Probab=61.36 E-value=29 Score=31.16 Aligned_cols=116 Identities=14% Similarity=0.075 Sum_probs=58.0
Q ss_pred HHHHHhcCCCEEEeeecccccc--cCCC-HHHHHHHHHHHHHCCCeEEEEeCCcHHHHh-------cCChHHHHHHHHHH
Q 024925 129 VEQLKDIGCKWVVLGHSERRHV--IGED-DQFIGKKAAYALSEGLGVIACIGEQLQERE-------AGKTFDVCFQQLKA 198 (260)
Q Consensus 129 a~mLkd~G~~~viIGHSERR~~--f~Et-d~~I~~Kv~~Al~~gL~pIlCIGE~leere-------~g~~~~vl~~Ql~~ 198 (260)
.+.||++|++.|=+-|.-.... -+|. -+.+.+=+..|.++||.+|+.+-....... -..+.+...+.++.
T Consensus 91 i~~ik~~G~N~VRi~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~Vild~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (359)
T 4hty_A 91 FEVIRSWGANVVRVPVHPRAWKERGVKGYLELLDQVVAWNNELGIYTILDWHSIGNLKSEMFQNNSYHTTKGETFDFWRR 170 (359)
T ss_dssp HHHHHHTTCSEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCEEETTTTEESSGGGCCCHHHHHHHHHH
T ss_pred HHHHHhcCCCEEEEeccHHHhhccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCCCCCCcccccCCcchhHHHHHHHHHHH
Confidence 4678899999988887754310 0000 112333458899999999998754321000 00122333334444
Q ss_pred HHhcCCCCCceEEEE----cccccccCCCCCCHHHHHHHHHHHHHHHHhhc
Q 024925 199 YADAIPSWDNVVIAY----EPVWAIGTGKVATPEQAQEVHAALRDWLKNMS 245 (260)
Q Consensus 199 ~l~~i~~~~~iiIAY----EPvWAIGTG~~aspe~iqe~~~~IR~~l~~~~ 245 (260)
++....+..+ ||+| ||...-.....++.+...+.++.+-+.+++..
T Consensus 171 la~ryk~~p~-Vi~~el~NEP~~~~~~~~~~~~~~~~~~~~~~~~~IR~~d 220 (359)
T 4hty_A 171 VSERYNGINS-VAFYEIFNEPTVFNGRLGIATWAEWKAINEEAITIIQAHN 220 (359)
T ss_dssp HHHHTTTCTT-EEEEESCSEECCGGGTTCCCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHhCCCCc-EEEEEeccCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhC
Confidence 4433333334 3445 56432111113455555555555555555543
No 43
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=61.31 E-value=51 Score=27.77 Aligned_cols=58 Identities=10% Similarity=0.044 Sum_probs=28.6
Q ss_pred CcceEEeeccccc-CHHHHHHHHHHHhhccccCCceEEEcCCcccHHHHHHHcC-CCceEeeec
Q 024925 53 NKFFVGGNWKCNG-TKESITKLVSDLNDAKLEADVDVVVAPPFVYIDQVKNSLT-DRIEIAAQN 114 (260)
Q Consensus 53 rk~~IigNWKmn~-t~~~~~~l~~~l~~~~~~~~v~VvvaPp~~~L~~v~~~~~-~~i~vgAQn 114 (260)
+.++-+..|-... +.++..+.++++. -..+++........+..+.+.+. ..+.+.+=+
T Consensus 25 ~mklg~~~~~~~~~~~~~~l~~~~~~G----~~~vEl~~~~~~~~~~~~~~~l~~~gl~v~~~~ 84 (287)
T 3kws_A 25 ELKLSFQEGIAPGESLNEKLDFMEKLG----VVGFEPGGGGLAGRVNEIKQALNGRNIKVSAIC 84 (287)
T ss_dssp CCEEEEETTSSCCSSHHHHHHHHHHTT----CCEEECBSTTCGGGHHHHHHHHTTSSCEECEEE
T ss_pred eeeEEEEecccCCCCHHHHHHHHHHcC----CCEEEecCCchHHHHHHHHHHHHHcCCeEEEEe
Confidence 3444444443332 3555555554432 12355554433455667766665 556665433
No 44
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=61.19 E-value=35 Score=28.93 Aligned_cols=78 Identities=18% Similarity=0.156 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHCCCeEEEEe--CCcHHHHhcCChHHHHHHHHHHHHhcCCCCCceEEEEcccccccCCCCCCHHHHHHH
Q 024925 156 QFIGKKAAYALSEGLGVIACI--GEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEV 233 (260)
Q Consensus 156 ~~I~~Kv~~Al~~gL~pIlCI--GE~leere~g~~~~vl~~Ql~~~l~~i~~~~~iiIAYEPvWAIGTG~~aspe~iqe~ 233 (260)
+.+.+-++.|.+.|...|++. |.... .......+.+.+.|+.+.+.... +.|++||.---.+....+++++.++
T Consensus 113 ~~~~~~i~~A~~lG~~~v~~~~~g~~~~-~~~~~~~~~~~~~l~~l~~~a~~---v~l~lEn~~~~~~~~~~~~~~~~~l 188 (290)
T 2zvr_A 113 ERVVKHTEVAGMFGALVIIGLVRGRREG-RSYEETEELFIESMKRLLELTEH---AKFVIEPLNRYETDFINTIDDALRI 188 (290)
T ss_dssp HHHHHHHHHHHHHTCEEEESGGGCCCTT-SCHHHHHHHHHHHHHHHHHHCSS---CCEEECCCCTTTCSSCCSHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEecCCCCCCC-cCHHHHHHHHHHHHHHHHHHhcc---CEEEEEeCCCcCccccCCHHHHHHH
Confidence 345666677888888877744 43110 00001122334444444433222 7899999731223445677776655
Q ss_pred HHHH
Q 024925 234 HAAL 237 (260)
Q Consensus 234 ~~~I 237 (260)
.+.+
T Consensus 189 ~~~~ 192 (290)
T 2zvr_A 189 LRKI 192 (290)
T ss_dssp HHHH
T ss_pred HHHc
Confidence 5444
No 45
>3hh8_A Metal ABC transporter substrate-binding lipoprote; lipoprotein, metal binding, cell membrane, copper transport, iron; 1.87A {Streptococcus pyogenes serotype M1} SCOP: c.92.2.2 PDB: 1psz_A 3ztt_A
Probab=60.49 E-value=13 Score=33.11 Aligned_cols=48 Identities=23% Similarity=0.290 Sum_probs=33.6
Q ss_pred HHHHHHHHHhcCCCCCceEEEEcccc---------------cccCCCCCCHHHHHHHHHHHHH
Q 024925 192 CFQQLKAYADAIPSWDNVVIAYEPVW---------------AIGTGKVATPEQAQEVHAALRD 239 (260)
Q Consensus 192 l~~Ql~~~l~~i~~~~~iiIAYEPvW---------------AIGTG~~aspe~iqe~~~~IR~ 239 (260)
+.++++..+..++...+.+|.|+|.| .+.+|..++|.+++++.+.||+
T Consensus 168 Ld~~~~~~l~~~~~~~~~~v~~H~af~Yf~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~ 230 (294)
T 3hh8_A 168 LDKEAKSKFDAIAENKKLIVTSEGCFKYFSKAYGVPSAYIWEINTEEEGTPDQISSLIEKLKV 230 (294)
T ss_dssp HHHHHHHTTTTSCGGGCCEEEEESCCHHHHHHHTCCEEEEESSCCSCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCccCcEEEEECChHHHHHHHcCCceeeccccCCCCCCCHHHHHHHHHHHHH
Confidence 34444444444443235678899977 3457889999999999999987
No 46
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=59.95 E-value=16 Score=30.84 Aligned_cols=80 Identities=11% Similarity=0.100 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHCCCeEEEE-eCCcHHHHhcCChHHHHHHHHHHHHhcCCCCCceEEEEccccccc--CCCCCCHHHHHH
Q 024925 156 QFIGKKAAYALSEGLGVIAC-IGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIG--TGKVATPEQAQE 232 (260)
Q Consensus 156 ~~I~~Kv~~Al~~gL~pIlC-IGE~leere~g~~~~vl~~Ql~~~l~~i~~~~~iiIAYEPvWAIG--TG~~aspe~iqe 232 (260)
+.+.+-++.|.+.|...|++ .| ...........+.+.+.|+.+.+.. ....|.|+|||..--. +....+++++.+
T Consensus 93 ~~~~~~i~~A~~lGa~~v~~~~g-~~~~~~~~~~~~~~~~~l~~l~~~a-~~~Gv~l~lE~~n~~~~~~~~~~~~~~~~~ 170 (269)
T 3ngf_A 93 DNVDIALHYALALDCRTLHAMSG-ITEGLDRKACEETFIENFRYAADKL-APHGITVLVEPLNTRNMPGYFIVHQLEAVG 170 (269)
T ss_dssp HHHHHHHHHHHHTTCCEEECCBC-BCTTSCHHHHHHHHHHHHHHHHHHH-GGGTCEEEECCCCTTTSTTBSCCCHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEccC-CCCCCCHHHHHHHHHHHHHHHHHHH-HHcCCEEEEeeCCcccCccchhcCHHHHHH
Confidence 45666678888888887766 45 2110000011222333333333221 1235789999853221 223456777665
Q ss_pred HHHHH
Q 024925 233 VHAAL 237 (260)
Q Consensus 233 ~~~~I 237 (260)
+.+.+
T Consensus 171 l~~~v 175 (269)
T 3ngf_A 171 LVKRV 175 (269)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 55443
No 47
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=58.57 E-value=33 Score=29.86 Aligned_cols=74 Identities=11% Similarity=0.162 Sum_probs=49.5
Q ss_pred CCcccHHHHHHHcCCCceEeeeccccCCCcccccccCHHHHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCe
Q 024925 92 PPFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLG 171 (260)
Q Consensus 92 Pp~~~L~~v~~~~~~~i~vgAQnv~~~~~GA~TGEISa~mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~ 171 (260)
..+.+|..+.+.. ++.|-.++.- +=+.-...++++|++.|++|++-.. +.+..=+..+.+.||.
T Consensus 93 G~~~~l~~i~~~v--~lPvl~kdfI-------~d~~qi~~a~~~GAD~VlL~~~~l~-------~~l~~l~~~a~~lGl~ 156 (254)
T 1vc4_A 93 GSLLDLKRVREAV--DLPLLRKDFV-------VDPFMLEEARAFGASAALLIVALLG-------ELTGAYLEEARRLGLE 156 (254)
T ss_dssp CCHHHHHHHHHHC--CSCEEEESCC-------CSHHHHHHHHHTTCSEEEEEHHHHG-------GGHHHHHHHHHHHTCE
T ss_pred cCHHHHHHHHHhc--CCCEEECCcC-------CCHHHHHHHHHcCCCEEEECccchH-------HHHHHHHHHHHHCCCe
Confidence 4667888887765 3445444411 1111346688999999999998542 2355555778888999
Q ss_pred EEEEeCCcHH
Q 024925 172 VIACIGEQLQ 181 (260)
Q Consensus 172 pIlCIGE~le 181 (260)
+++|+-...|
T Consensus 157 ~lvev~~~~E 166 (254)
T 1vc4_A 157 ALVEVHTERE 166 (254)
T ss_dssp EEEEECSHHH
T ss_pred EEEEECCHHH
Confidence 9999986654
No 48
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=58.05 E-value=1e+02 Score=27.55 Aligned_cols=48 Identities=19% Similarity=0.019 Sum_probs=35.2
Q ss_pred CHHHHHhcCCCEEEee-ecccccccCCCHHHHHHHHHHHHHCCCeEEEEe
Q 024925 128 SVEQLKDIGCKWVVLG-HSERRHVIGEDDQFIGKKAAYALSEGLGVIACI 176 (260)
Q Consensus 128 Sa~mLkd~G~~~viIG-HSERR~~f~Etd~~I~~Kv~~Al~~gL~pIlCI 176 (260)
..+.||+.|+++|=|. +-|-.. -..+.+.+.+.++.|.++||++++-+
T Consensus 32 ~~~ilk~~G~N~VRi~~w~~P~~-g~~~~~~~~~~~~~A~~~GlkV~ld~ 80 (332)
T 1hjs_A 32 LENILAANGVNTVRQRVWVNPAD-GNYNLDYNIAIAKRAKAAGLGVYIDF 80 (332)
T ss_dssp HHHHHHHTTCCEEEEEECSSCTT-CTTSHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHCCCCEEEEeeeeCCCC-CcCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 4677899999999886 322221 12345667778899999999999974
No 49
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=57.10 E-value=16 Score=31.23 Aligned_cols=19 Identities=26% Similarity=0.371 Sum_probs=10.4
Q ss_pred HHHHHHHHHHCCCeEEEEe
Q 024925 158 IGKKAAYALSEGLGVIACI 176 (260)
Q Consensus 158 I~~Kv~~Al~~gL~pIlCI 176 (260)
+.+-++.|.+.|...|++-
T Consensus 110 ~~~~i~~A~~lG~~~v~~~ 128 (295)
T 3cqj_A 110 MRKAIQFAQDVGIRVIQLA 128 (295)
T ss_dssp HHHHHHHHHHHTCCEEEEC
T ss_pred HHHHHHHHHHcCCCEEEEC
Confidence 4444555666666655544
No 50
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius}
Probab=57.10 E-value=17 Score=33.15 Aligned_cols=54 Identities=26% Similarity=0.332 Sum_probs=39.6
Q ss_pred Cccccc---ccCHHHHHhcCCCEEEeeec--------ccccccC----CCHHHHHHHHHHHHHCCCeEEE
Q 024925 120 GGAFTG---EISVEQLKDIGCKWVVLGHS--------ERRHVIG----EDDQFIGKKAAYALSEGLGVIA 174 (260)
Q Consensus 120 ~GA~TG---EISa~mLkd~G~~~viIGHS--------ERR~~f~----Etd~~I~~Kv~~Al~~gL~pIl 174 (260)
.|+|+. .-+.+.|++.||++|-|=|. .--. ++ ++++.+...++.|.+.||.+++
T Consensus 47 ~~~~~~~~~~~~l~~lk~~g~N~VrL~v~~~~~~~~~~~~~-~~~~~t~~~~~v~~~~~~Ak~~GL~V~l 115 (343)
T 3civ_A 47 HGTWGTDEARASMRALAEQPFNWVTLAFAGLMEHPGDPAIA-YGPPVTVSDDEIASMAELAHALGLKVCL 115 (343)
T ss_dssp TTGGGSHHHHHHHHHHHHSSCSEEEEEEEEEESSTTCCCCB-CSTTTBCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCcCchhHHHHHHHHHHcCCCEEEEEeeecCCCCCCCccc-ccCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 355553 25677899999999988432 2111 12 3899999999999999999987
No 51
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=56.77 E-value=1.1e+02 Score=29.26 Aligned_cols=77 Identities=16% Similarity=0.063 Sum_probs=57.4
Q ss_pred EcCCcccHHHHHHHcCCCceEeeeccccCCCcccccccCHHHHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCC
Q 024925 90 VAPPFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEG 169 (260)
Q Consensus 90 vaPp~~~L~~v~~~~~~~i~vgAQnv~~~~~GA~TGEISa~mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~g 169 (260)
+-.++.+|..+++.. ++.|-.+| +. .++. =...++.+|++.|++-|+-+. ++.+..=++.|.+.|
T Consensus 93 F~gs~~dL~~vr~~v--~lPvLrKD-----FI-~d~~-Qi~ea~~~GAD~ILLi~a~l~------~~~l~~l~~~a~~lg 157 (452)
T 1pii_A 93 FQGSFNFLPIVSQIA--PQPILCKD-----FI-IDPY-QIYLARYYQADACLLMLSVLD------DDQYRQLAAVAHSLE 157 (452)
T ss_dssp TCCCTTHHHHHHHHC--CSCEEEES-----CC-CSHH-HHHHHHHTTCSEEEEETTTCC------HHHHHHHHHHHHHTT
T ss_pred cCCCHHHHHHHHHhc--CCCeEEEe-----cc-CCHH-HHHHHHHcCCCEEEEEcccCC------HHHHHHHHHHHHHcC
Confidence 447889999998876 46666777 22 1222 244588999999999999433 456777778999999
Q ss_pred CeEEEEeCCcHH
Q 024925 170 LGVIACIGEQLQ 181 (260)
Q Consensus 170 L~pIlCIGE~le 181 (260)
|.+++||-...|
T Consensus 158 m~~LvEvh~~eE 169 (452)
T 1pii_A 158 MGVLTEVSNEEE 169 (452)
T ss_dssp CEEEEEECSHHH
T ss_pred CeEEEEeCCHHH
Confidence 999999997765
No 52
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=56.30 E-value=32 Score=31.42 Aligned_cols=61 Identities=18% Similarity=0.137 Sum_probs=42.4
Q ss_pred CCceEEEcCCcccHHH---HHHHcCCCceEeeeccccCCCcccccccCHHHHHhcCCCEEEeeecccccc
Q 024925 84 ADVDVVVAPPFVYIDQ---VKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHV 150 (260)
Q Consensus 84 ~~v~VvvaPp~~~L~~---v~~~~~~~i~vgAQnv~~~~~GA~TGEISa~mLkd~G~~~viIGHSERR~~ 150 (260)
.+.+.++.+-.+.... +.+.+ ++.+-+ |+.. |..|+..+.+.|+++|++.|+.|++--|..
T Consensus 201 AGAd~i~~e~~~~~e~~~~i~~~l--~~P~la-n~~~---~g~~~~~~~~eL~~lGv~~v~~~~~~~raa 264 (318)
T 1zlp_A 201 AGADATFVEAPANVDELKEVSAKT--KGLRIA-NMIE---GGKTPLHTPEEFKEMGFHLIAHSLTAVYAT 264 (318)
T ss_dssp TTCSEEEECCCCSHHHHHHHHHHS--CSEEEE-EECT---TSSSCCCCHHHHHHHTCCEEEECSHHHHHH
T ss_pred cCCCEEEEcCCCCHHHHHHHHHhc--CCCEEE-Eecc---CCCCCCCCHHHHHHcCCeEEEEchHHHHHH
Confidence 5667666665555444 44444 355555 6653 445788999999999999999999977754
No 53
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=55.99 E-value=15 Score=32.11 Aligned_cols=19 Identities=5% Similarity=0.190 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHCCCeEEEE
Q 024925 157 FIGKKAAYALSEGLGVIAC 175 (260)
Q Consensus 157 ~I~~Kv~~Al~~gL~pIlC 175 (260)
.+.+-++.|.+.|...|++
T Consensus 110 ~~~~~i~~A~~lG~~~v~~ 128 (335)
T 2qw5_A 110 YLKSRVDITAALGGEIMMG 128 (335)
T ss_dssp HHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEec
Confidence 3455556667777776654
No 54
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=55.81 E-value=17 Score=32.10 Aligned_cols=50 Identities=10% Similarity=0.084 Sum_probs=35.5
Q ss_pred HHHHHHHHHHhcCCCCCceEEEEcccc---------------cccCCCCCCHHHHHHHHHHHHHH
Q 024925 191 VCFQQLKAYADAIPSWDNVVIAYEPVW---------------AIGTGKVATPEQAQEVHAALRDW 240 (260)
Q Consensus 191 vl~~Ql~~~l~~i~~~~~iiIAYEPvW---------------AIGTG~~aspe~iqe~~~~IR~~ 240 (260)
.+.++++..++.++...+.+|.|+|.| .+.++..++|.+++++.+.||+.
T Consensus 147 ~ld~~~~~~l~~~~~~~~~~vt~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~ 211 (282)
T 3mfq_A 147 DLHAWVEKELSVIPKESRYLVTPHDAFNYFAASYDFTLYAPQGVSTDSEVANSDMIETVNLIIDH 211 (282)
T ss_dssp HHHHHHHHHHTTSCGGGCEEECSSSCCHHHHHHTTCEEECSSCSSSCSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCccCcEEEEECchHHHHHHHCCCeEecccccCCCCCCCHHHHHHHHHHHHHc
Confidence 345555555666653356677888876 34477889999999999999874
No 55
>2re2_A Uncharacterized protein TA1041; dinitrogenase iron-molybdenum cofactor, structural genomics, center for structural genomics; HET: MSE; 1.30A {Thermoplasma acidophilum dsm 1728}
Probab=54.96 E-value=8.1 Score=30.62 Aligned_cols=44 Identities=16% Similarity=0.179 Sum_probs=33.5
Q ss_pred cccCHHHHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCcHH
Q 024925 125 GEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQ 181 (260)
Q Consensus 125 GEISa~mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pIlCIGE~le 181 (260)
|...++.|++.||+.||.|.- ..+....|+.|+.++.+.+.+.+
T Consensus 68 g~~~~~~L~~~gv~~VI~g~i-------------G~~a~~~L~~GI~v~~~~~~~ve 111 (136)
T 2re2_A 68 GVFMLKSALDHGANALVLSEI-------------GSPGFNFIKNKMDVYIVPEMPVA 111 (136)
T ss_dssp HHHHHHHHHHTTCSEEEESCC-------------BHHHHHHHTTTSEEEECCSCBHH
T ss_pred cHHHHHHHHHcCCCEEEECCC-------------CHhHHHHHHCCCEEEEcCCCCHH
Confidence 567899999999999999974 33445566669999998765543
No 56
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=54.25 E-value=69 Score=28.24 Aligned_cols=77 Identities=14% Similarity=0.238 Sum_probs=43.8
Q ss_pred CCceEEEcCCcccHHHHHHHcCCCceEeeeccccCCCcccccc----cCHHHHHhcCCCEEEeeecccccccCCCH-HHH
Q 024925 84 ADVDVVVAPPFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGE----ISVEQLKDIGCKWVVLGHSERRHVIGEDD-QFI 158 (260)
Q Consensus 84 ~~v~VvvaPp~~~L~~v~~~~~~~i~vgAQnv~~~~~GA~TGE----ISa~mLkd~G~~~viIGHSERR~~f~Etd-~~I 158 (260)
.+++=+||+| ..+..+++...+.+.+-.=-+-+ .|.-.|+ .++....+.|+++.++| |-+|+-.| ...
T Consensus 156 ~G~dGvV~s~-~e~~~ir~~~~~~f~~vtPGIr~--~g~~~gDQ~Rv~T~~~a~~aGad~iVvG----r~I~~a~dp~~a 228 (259)
T 3tfx_A 156 SGADGVICSP-LEVKKLHENIGDDFLYVTPGIRP--AGNAKDDQSRVATPKMAKEWGSSAIVVG----RPITLASDPKAA 228 (259)
T ss_dssp TTCCEEECCG-GGHHHHHHHHCSSSEEEECCCCC--C-----------CHHHHHHTTCSEEEEC----HHHHTSSSHHHH
T ss_pred hCCCEEEECH-HHHHHHHhhcCCccEEEcCCcCC--CCCCcCCccccCCHHHHHHcCCCEEEEC----hHHhCCCCHHHH
Confidence 4677788887 44566666655555432222222 3555566 67999999999999999 55665444 444
Q ss_pred HHHHHHHHH
Q 024925 159 GKKAAYALS 167 (260)
Q Consensus 159 ~~Kv~~Al~ 167 (260)
.++++..++
T Consensus 229 ~~~i~~~~~ 237 (259)
T 3tfx_A 229 YEAIKKEFN 237 (259)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHH
Confidence 455555443
No 57
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=54.11 E-value=31 Score=29.12 Aligned_cols=56 Identities=13% Similarity=0.087 Sum_probs=27.4
Q ss_pred EEeecccccCHHHHHHHHHHHhhccccCCceEEEcCCc----ccHHHHHHHcC-CCceEeeeccc
Q 024925 57 VGGNWKCNGTKESITKLVSDLNDAKLEADVDVVVAPPF----VYIDQVKNSLT-DRIEIAAQNSW 116 (260)
Q Consensus 57 IigNWKmn~t~~~~~~l~~~l~~~~~~~~v~VvvaPp~----~~L~~v~~~~~-~~i~vgAQnv~ 116 (260)
++....+..+.++..+.++++. -..+++....+. ..+..+++.+. ..+.+.+=+++
T Consensus 13 lg~~t~~~~~l~~~l~~~~~~G----~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~ 73 (290)
T 3tva_A 13 IGVFTSVDAGLGVHLEVAQDLK----VPTVQVHAPHPHTRTREHAQAFRAKCDAAGIQVTVIFGG 73 (290)
T ss_dssp EEEEEESSSSSSBCHHHHHHTT----CSEEEEECCCGGGCSHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred EEEEecCCCCHHHHHHHHHHcC----CCEEEecCCCCCcCCHHHHHHHHHHHHHcCCEEEEEeec
Confidence 3444455555555555555432 124666554332 12445555554 56766665443
No 58
>3ujp_A Mn transporter subunit; manganese binding protein, metal binding protein; 2.70A {Synechocystis SP} PDB: 1xvl_A 3v63_A
Probab=54.10 E-value=20 Score=32.23 Aligned_cols=50 Identities=22% Similarity=0.296 Sum_probs=36.2
Q ss_pred HHHHHHHHHHhcCCCCCceEEEEcccc---------------cccCCCCCCHHHHHHHHHHHHHH
Q 024925 191 VCFQQLKAYADAIPSWDNVVIAYEPVW---------------AIGTGKVATPEQAQEVHAALRDW 240 (260)
Q Consensus 191 vl~~Ql~~~l~~i~~~~~iiIAYEPvW---------------AIGTG~~aspe~iqe~~~~IR~~ 240 (260)
.+.++++..++.++...+.+|.|+|.| .|.++..++|.+++++.+.||+.
T Consensus 174 ~Ld~~~~~~l~~~p~~~~~~v~~H~af~Yfa~~yGl~~~~~~~i~~~~ePs~~~l~~l~~~ik~~ 238 (307)
T 3ujp_A 174 AIDRQLGADLEQVPANQRFLVSCEGAFSYLARDYGMEEIYMWPINAEQQFTPKQVQTVIEEVKTN 238 (307)
T ss_dssp HHHHHHHHHHSSSCGGGCEEEEEESTTHHHHHHTTCEEEEEESSCCSSCCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhhccccCCEEEEECchHHHHHHHCCCcEEEeeccCCCCCCCHHHHHHHHHHHHhc
Confidence 355555666666653346677888865 45678889999999999999873
No 59
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=53.37 E-value=31 Score=28.89 Aligned_cols=30 Identities=13% Similarity=0.041 Sum_probs=16.7
Q ss_pred ceEEEEcccccccCCCCCCHHHHHHHHHHH
Q 024925 208 NVVIAYEPVWAIGTGKVATPEQAQEVHAAL 237 (260)
Q Consensus 208 ~iiIAYEPvWAIGTG~~aspe~iqe~~~~I 237 (260)
.+.|++||.+--++....+++++.++.+.+
T Consensus 139 gv~l~lEn~~~~~~~~~~~~~~~~~l~~~v 168 (285)
T 1qtw_A 139 GVTAVIENTAGQGSNLGFKFEHLAAIIDGV 168 (285)
T ss_dssp SCEEEEECCCCCTTBCCSSHHHHHHHHHHC
T ss_pred CCEEEEecCCCCCCcccCCHHHHHHHHHhh
Confidence 567777777533333334666666555443
No 60
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=53.10 E-value=1.2e+02 Score=27.16 Aligned_cols=114 Identities=15% Similarity=0.136 Sum_probs=63.2
Q ss_pred CCcccccccCHHHHHhcCCCEEEeeec--cc--cccc-CCCHHHHHHHHHHHHHCCCeE----EEEeCCcHHHHhcCChH
Q 024925 119 KGGAFTGEISVEQLKDIGCKWVVLGHS--ER--RHVI-GEDDQFIGKKAAYALSEGLGV----IACIGEQLQEREAGKTF 189 (260)
Q Consensus 119 ~~GA~TGEISa~mLkd~G~~~viIGHS--ER--R~~f-~Etd~~I~~Kv~~Al~~gL~p----IlCIGE~leere~g~~~ 189 (260)
..|..|-| -.+.|+++|++.+-+|-- +. +.+. .-+-+.+-+-++.+.+.|+.+ |+=.||+.+++.
T Consensus 153 t~G~l~~e-~l~~L~~aGvd~v~i~les~~e~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~I~Gl~et~ed~~----- 226 (369)
T 1r30_A 153 TLGTLSES-QAQRLANAGLDYYNHNLDTSPEFYGNIITTRTYQERLDTLEKVRDAGIKVCSGGIVGLGETVKDRA----- 226 (369)
T ss_dssp ECSSCCHH-HHHHHHHHCCCEEECCCBSCHHHHHHHCCSSCHHHHHHHHHHHHHHHCEEECCEEECSSCCHHHHH-----
T ss_pred ecCCCCHH-HHHHHHHCCCCEEeecCcCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCeeeeeeEeeCCCCHHHHH-----
Confidence 34544444 366789999999987631 11 1111 245567777888888888853 222356665442
Q ss_pred HHHHHHHHHHHhcCC-CCCceE-EEEccc--ccccCCCCCCHHHHHHHHHHHHHHHHh
Q 024925 190 DVCFQQLKAYADAIP-SWDNVV-IAYEPV--WAIGTGKVATPEQAQEVHAALRDWLKN 243 (260)
Q Consensus 190 ~vl~~Ql~~~l~~i~-~~~~ii-IAYEPv--WAIGTG~~aspe~iqe~~~~IR~~l~~ 243 (260)
+-+.. +..+. ..+.+. -.+-|. .....-..+++++..++.+..|..+.+
T Consensus 227 ----~~l~~-l~~l~~~~~~i~~~~l~p~~gT~l~~~~~~~~~~~~~~~~~~r~~l~~ 279 (369)
T 1r30_A 227 ----GLLLQ-LANLPTPPESVPINMLVKVKGTPLADNDDVDAFDFIRTIAVARIMMPT 279 (369)
T ss_dssp ----HHHHH-HHSSSSCCSEEEEEECCCCTTSTTSSCCCCCHHHHHHHHHHHHHHCTT
T ss_pred ----HHHHH-HHhhcCCCCEEEeeeeeecCCCcCCCCCCCCHHHHHHHHHHHHHhCCC
Confidence 22222 22332 122222 223332 122222357899999999999988755
No 61
>2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A*
Probab=52.59 E-value=80 Score=30.91 Aligned_cols=107 Identities=15% Similarity=0.148 Sum_probs=62.6
Q ss_pred HHHHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCcH--HHHhcCChHHHHHHHHHHHHhcCCCC
Q 024925 129 VEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQL--QEREAGKTFDVCFQQLKAYADAIPSW 206 (260)
Q Consensus 129 a~mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pIlCIGE~l--eere~g~~~~vl~~Ql~~~l~~i~~~ 206 (260)
.++||++|++.|=+=|-+-+.- .++.+ +.+-+.||.+|+.+.... -.+......+...+++...++..-..
T Consensus 93 i~LmK~~GiN~VRvy~~~P~~~---~d~~l----dl~~~~GIyVIle~~~p~~~i~~~~P~~~~~~~~r~~~~V~ry~nh 165 (555)
T 2w61_A 93 IPFLKMLGVNTLRVYAIDPTKS---HDICM----EALSAEGMYVLLDLSEPDISINRENPSWDVHIFERYKSVIDAMSSF 165 (555)
T ss_dssp HHHHHHHTCSEEEECCCCTTSC---CHHHH----HHHHHTTCEEEEESCBTTBSCCTTSCCCCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHcCCCEEEEeccCCCCC---hHHHH----HHHHhcCCEEEEeCCCCCcccccCCHHHHHHHHHHHHHHHHHcCCC
Confidence 4578999999997755553321 14444 778999999999975321 11112223344444555544433233
Q ss_pred CceE---EEEcccccccCCCCCCHHHHHHHHHHHHHHHHhh
Q 024925 207 DNVV---IAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNM 244 (260)
Q Consensus 207 ~~ii---IAYEPvWAIGTG~~aspe~iqe~~~~IR~~l~~~ 244 (260)
.+|+ |.-|+.. |.........+..+++.+|++|++.
T Consensus 166 P~Vi~W~vGNE~~~--~~~~~~~~~y~~aa~r~~~~~lk~~ 204 (555)
T 2w61_A 166 PNLLGYFAGNQVTN--DHTNTFASPFVKAAIRDAKEYISHS 204 (555)
T ss_dssp TTEEEEEEEESSSC--STTCGGGHHHHHHHHHHHHHHHHHS
T ss_pred CcEEEEEeCccccC--CCccchhhHHHHHHHHHHHHHHHhc
Confidence 4443 3346532 2222234567788999999999986
No 62
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=52.20 E-value=43 Score=28.10 Aligned_cols=77 Identities=10% Similarity=-0.009 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHCCCeEEEE-eCCcHHHHhcCChHHHHHHHHHHHHhcCCCCCceEEEEcccccccCCCCCCHHHHHHHH
Q 024925 156 QFIGKKAAYALSEGLGVIAC-IGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVH 234 (260)
Q Consensus 156 ~~I~~Kv~~Al~~gL~pIlC-IGE~leere~g~~~~vl~~Ql~~~l~~i~~~~~iiIAYEPvWAIGTG~~aspe~iqe~~ 234 (260)
+.+.+-+..|.+.|...|.+ .|............+.+.+.|+.+.+.. ....|.|+|||.+ +....+++++.++.
T Consensus 84 ~~~~~~i~~A~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a-~~~Gv~l~lE~~~---~~~~~~~~~~~~l~ 159 (286)
T 3dx5_A 84 EKCEQLAILANWFKTNKIRTFAGQKGSADFSQQERQEYVNRIRMICELF-AQHNMYVLLETHP---NTLTDTLPSTLELL 159 (286)
T ss_dssp HHHHHHHHHHHHHTCCEEEECSCSSCGGGSCHHHHHHHHHHHHHHHHHH-HHTTCEEEEECCT---TSTTSSHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEEcCCCCCcccCcHHHHHHHHHHHHHHHHHH-HHhCCEEEEecCC---CcCcCCHHHHHHHH
Confidence 34555667777777777644 4532211000001122333333332211 1124678888854 12234566654444
Q ss_pred HH
Q 024925 235 AA 236 (260)
Q Consensus 235 ~~ 236 (260)
+.
T Consensus 160 ~~ 161 (286)
T 3dx5_A 160 GE 161 (286)
T ss_dssp HH
T ss_pred Hh
Confidence 33
No 63
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=51.64 E-value=40 Score=28.70 Aligned_cols=43 Identities=14% Similarity=0.145 Sum_probs=31.2
Q ss_pred CHHHHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEEEEe
Q 024925 128 SVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACI 176 (260)
Q Consensus 128 Sa~mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pIlCI 176 (260)
-.+.+.++|++++.++- |.= ..+....-++.+.+.|+.+.+-+
T Consensus 77 ~i~~~~~aGadgv~vh~-e~~-----~~~~~~~~~~~i~~~g~~~gv~~ 119 (230)
T 1tqj_A 77 YVEDFAKAGADIISVHV-EHN-----ASPHLHRTLCQIRELGKKAGAVL 119 (230)
T ss_dssp THHHHHHHTCSEEEEEC-STT-----TCTTHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHcCCCEEEECc-ccc-----cchhHHHHHHHHHHcCCcEEEEE
Confidence 36899999999999972 100 22234555678889999999988
No 64
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=51.25 E-value=56 Score=26.99 Aligned_cols=72 Identities=11% Similarity=-0.004 Sum_probs=37.9
Q ss_pred HHHHHHHHHHCCCeEEEEe-CCcHHHHhcCChHHHH-HHHHHHHHhcCCCCCceEEEEcccccccCCCCCCHHHHHHHHH
Q 024925 158 IGKKAAYALSEGLGVIACI-GEQLQEREAGKTFDVC-FQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHA 235 (260)
Q Consensus 158 I~~Kv~~Al~~gL~pIlCI-GE~leere~g~~~~vl-~~Ql~~~l~~i~~~~~iiIAYEPvWAIGTG~~aspe~iqe~~~ 235 (260)
+.+-+..|.+.|...|++. |.... ...+.+ .+.|+.+.+... ...+.|++||.. -.+....+++++.++.+
T Consensus 87 ~~~~i~~a~~lG~~~v~~~~g~~~~-----~~~~~~~~~~l~~l~~~a~-~~gv~l~~E~~~-~~~~~~~~~~~~~~l~~ 159 (272)
T 2q02_A 87 TEGLLRDAQGVGARALVLCPLNDGT-----IVPPEVTVEAIKRLSDLFA-RYDIQGLVEPLG-FRVSSLRSAVWAQQLIR 159 (272)
T ss_dssp HHHHHHHHHHHTCSEEEECCCCSSB-----CCCHHHHHHHHHHHHHHHH-TTTCEEEECCCC-STTCSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEccCCCch-----hHHHHHHHHHHHHHHHHHH-HcCCEEEEEecC-CCcccccCHHHHHHHHH
Confidence 4555677778888777643 32210 222333 444444333211 134689999985 22334567777655444
Q ss_pred H
Q 024925 236 A 236 (260)
Q Consensus 236 ~ 236 (260)
.
T Consensus 160 ~ 160 (272)
T 2q02_A 160 E 160 (272)
T ss_dssp H
T ss_pred H
Confidence 3
No 65
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=50.06 E-value=27 Score=28.84 Aligned_cols=80 Identities=16% Similarity=0.047 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHCCCeEEEE-eCCcHHHHhcCChHHHHHHHHHHHHhcCCCCCceEEEEcccccc--cCCCCCCHHHHHH
Q 024925 156 QFIGKKAAYALSEGLGVIAC-IGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAI--GTGKVATPEQAQE 232 (260)
Q Consensus 156 ~~I~~Kv~~Al~~gL~pIlC-IGE~leere~g~~~~vl~~Ql~~~l~~i~~~~~iiIAYEPvWAI--GTG~~aspe~iqe 232 (260)
+.+.+-++.|.+.|...|++ .|............+.+.+.|+.+.+... ...|.|++||.--- .+....+++++.+
T Consensus 85 ~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~-~~gv~l~~E~~~~~~~~~~~~~~~~~~~~ 163 (260)
T 1k77_A 85 ADIDLALEYALALNCEQVHVMAGVVPAGEDAERYRAVFIDNIRYAADRFA-PHGKRILVEALSPGVKPHYLFSSQYQALA 163 (260)
T ss_dssp HHHHHHHHHHHHTTCSEEECCCCBCCTTSCHHHHHHHHHHHHHHHHHHHG-GGTCEEEECCCCTTTSTTBSCCSHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECcCCCCCCCCHHHHHHHHHHHHHHHHHHHH-HcCCEEEEEeCCccCCCcCccCCHHHHHH
Confidence 45666677888888887765 34321100000011223333333332211 13578999996211 1234456776555
Q ss_pred HHHH
Q 024925 233 VHAA 236 (260)
Q Consensus 233 ~~~~ 236 (260)
+.+.
T Consensus 164 l~~~ 167 (260)
T 1k77_A 164 IVEE 167 (260)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 66
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=49.58 E-value=61 Score=28.43 Aligned_cols=56 Identities=14% Similarity=0.200 Sum_probs=36.9
Q ss_pred CCceEEEcCCccc---HHHHHHHcCCCceEeeeccccCCCcccccccCHHHHHhcCCCEEEeeec
Q 024925 84 ADVDVVVAPPFVY---IDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHS 145 (260)
Q Consensus 84 ~~v~VvvaPp~~~---L~~v~~~~~~~i~vgAQnv~~~~~GA~TGEISa~mLkd~G~~~viIGHS 145 (260)
.+.+.++.+-.+. +..+.+.+. +.+ |+-.. +|.+|...|.+.|+++|++.|+.|.+
T Consensus 180 AGAd~i~~e~~~~~~~~~~i~~~~~--~P~---n~~~~-~~~~~p~~~~~eL~~lGv~~v~~~~~ 238 (255)
T 2qiw_A 180 AGARSVYPVGLSTAEQVERLVDAVS--VPV---NITAH-PVDGHGAGDLATLAGLGVRRVTFGPL 238 (255)
T ss_dssp HTCSEEEECCCCSHHHHHHHHTTCS--SCB---EEECB-TTTBBTTBCHHHHHHTTCCEEECTTH
T ss_pred cCCcEEEEcCCCCHHHHHHHHHhCC--CCE---EEEec-CCCCCCCCCHHHHHHcCCCEEEEHHH
Confidence 3556665554443 334444443 333 44422 45678899999999999999999988
No 67
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=49.37 E-value=44 Score=28.65 Aligned_cols=78 Identities=15% Similarity=0.113 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHCCCeEEEE-eCCcHHHHhcCChHHHHHHHHHHHHhcCCCCCceEEEEcccccccCCCCCCHHHHHHHH
Q 024925 156 QFIGKKAAYALSEGLGVIAC-IGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVH 234 (260)
Q Consensus 156 ~~I~~Kv~~Al~~gL~pIlC-IGE~leere~g~~~~vl~~Ql~~~l~~i~~~~~iiIAYEPvWAIGTG~~aspe~iqe~~ 234 (260)
+.+.+-+..|.+.|...|++ .|-.... ......+.+.+.|+.+++. ...+.|++||..-.++-...+++++.++.
T Consensus 94 ~~~~~~i~~A~~lGa~~vv~h~g~~~~~-~~~~~~~~~~~~l~~l~~~---a~gv~l~lEn~~~~~~~~~~t~~~~~~li 169 (303)
T 3aal_A 94 DFLRAEIERTEAIGAKQLVLHPGAHVGA-GVEAGLRQIIRGLNEVLTR---EQNVQIALETMAGKGSECGRTFEELAYII 169 (303)
T ss_dssp HHHHHHHHHHHHHTCSEEEECCEECTTS-CHHHHHHHHHHHHHHHCCS---SCSCEEEEECCCCCTTEECSSHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECCCcCCCC-CHHHHHHHHHHHHHHHHHh---CCCCEEEEecCCCCCCccCCCHHHHHHHH
Confidence 34555567777888776655 3422100 0001122233333333322 25688999998533332334777776655
Q ss_pred HHH
Q 024925 235 AAL 237 (260)
Q Consensus 235 ~~I 237 (260)
+.+
T Consensus 170 ~~v 172 (303)
T 3aal_A 170 DGV 172 (303)
T ss_dssp HHC
T ss_pred Hhc
Confidence 544
No 68
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=47.44 E-value=40 Score=30.34 Aligned_cols=61 Identities=15% Similarity=0.145 Sum_probs=40.2
Q ss_pred CCceEEEcCCcccH---HHHHHHcCCCceEeeeccccCCCcccccccCHHHHHhcCCCEEEeeecccccc
Q 024925 84 ADVDVVVAPPFVYI---DQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHV 150 (260)
Q Consensus 84 ~~v~VvvaPp~~~L---~~v~~~~~~~i~vgAQnv~~~~~GA~TGEISa~mLkd~G~~~viIGHSERR~~ 150 (260)
.+.+.++.+..+.. ..+.+.+. +.+-+ |+-. |..|...+++.|+++|++.|++|.+--|..
T Consensus 179 AGAd~i~~e~~~~~~~~~~i~~~~~--iP~~~-N~~~---~g~~p~~~~~eL~~~G~~~v~~~~~~~~aa 242 (295)
T 1xg4_A 179 AGAEMLFPEAITELAMYRQFADAVQ--VPILA-NITE---FGATPLFTTDELRSAHVAMALYPLSAFRAM 242 (295)
T ss_dssp TTCSEEEETTCCSHHHHHHHHHHHC--SCBEE-ECCS---SSSSCCCCHHHHHHTTCSEEEESSHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHcC--CCEEE-Eecc---cCCCCCCCHHHHHHcCCCEEEEChHHHHHH
Confidence 46676666554443 34444443 33333 5432 335788999999999999999999877643
No 69
>1toa_A Tromp-1, protein (periplasmic binding protein TROA); zinc binding protein, ABC trans binding protein; 1.80A {Treponema pallidum} SCOP: c.92.2.2 PDB: 1k0f_A
Probab=46.42 E-value=34 Score=30.65 Aligned_cols=50 Identities=16% Similarity=0.221 Sum_probs=35.6
Q ss_pred HHHHHHHHHHhcCCCCCceEEEEcccc---------------cccCCCCCCHHHHHHHHHHHHHH
Q 024925 191 VCFQQLKAYADAIPSWDNVVIAYEPVW---------------AIGTGKVATPEQAQEVHAALRDW 240 (260)
Q Consensus 191 vl~~Ql~~~l~~i~~~~~iiIAYEPvW---------------AIGTG~~aspe~iqe~~~~IR~~ 240 (260)
.+.++++..+..++...+.+|.|+|.| .+.+|..++|.+++++.+.||+.
T Consensus 181 ~Ld~~~~~~l~~~~~~~~~~v~~H~af~Yfa~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~ 245 (313)
T 1toa_A 181 KLDAYVRRKAQSLPAERRVLVTAHDAFGYFSRAYGFEVKGLQGVSTASEASAHDMQELAAFIAQR 245 (313)
T ss_dssp HHHHHHHHHHHTSCGGGCEEEEEESCCHHHHHHHTCEEEEEECSSCSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhCCccCCEEEEECCcHHHHHHHCCCeEEEeeccCCCCCCCHHHHHHHHHHHHHc
Confidence 345555666666653345577888854 44568899999999999999874
No 70
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=46.17 E-value=42 Score=27.76 Aligned_cols=80 Identities=19% Similarity=0.024 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHCCCeEEEEe-CCcHHHHhcCChHHHHHHHHHHHHhcCCCCCceEEEEcccccccCCCCCCHHHHHHHH
Q 024925 156 QFIGKKAAYALSEGLGVIACI-GEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVH 234 (260)
Q Consensus 156 ~~I~~Kv~~Al~~gL~pIlCI-GE~leere~g~~~~vl~~Ql~~~l~~i~~~~~iiIAYEPvWAIGTG~~aspe~iqe~~ 234 (260)
+.+.+-++.|.+.|...|++. |............+.+.+.|+.+.+... ...+.|++||.+--++ ...+++++.++.
T Consensus 84 ~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~-~~gv~l~lEn~~~~~~-~~~~~~~~~~l~ 161 (278)
T 1i60_A 84 TEFKGMMETCKTLGVKYVVAVPLVTEQKIVKEEIKKSSVDVLTELSDIAE-PYGVKIALEFVGHPQC-TVNTFEQAYEIV 161 (278)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCBCSSCCCHHHHHHHHHHHHHHHHHHHG-GGTCEEEEECCCCTTB-SSCSHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHHHH-hcCCEEEEEecCCccc-hhcCHHHHHHHH
Confidence 345555677777777766654 3211000000112233333443332211 1356899999864333 456777766555
Q ss_pred HHH
Q 024925 235 AAL 237 (260)
Q Consensus 235 ~~I 237 (260)
+.+
T Consensus 162 ~~~ 164 (278)
T 1i60_A 162 NTV 164 (278)
T ss_dssp HHH
T ss_pred HHh
Confidence 544
No 71
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=46.08 E-value=1.4e+02 Score=25.38 Aligned_cols=69 Identities=20% Similarity=0.165 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCChHHHHHHHHHHHHhcCCCCCceEEEEccc-ccccCCCCCCHHHHHHHH
Q 024925 156 QFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPV-WAIGTGKVATPEQAQEVH 234 (260)
Q Consensus 156 ~~I~~Kv~~Al~~gL~pIlCIGE~leere~g~~~~vl~~Ql~~~l~~i~~~~~iiIAYEPv-WAIGTG~~aspe~iqe~~ 234 (260)
+.+.+-+..|.+.|...|++ |-. .+...+.+.+.|+.+.+.. ..|.|+|||. | +...+++++.++.
T Consensus 105 ~~~~~~i~~A~~lGa~~v~~-g~~-----~~~~~~~~~~~l~~l~~~a---~Gv~l~lE~~~~----~~~~~~~~~~~l~ 171 (296)
T 2g0w_A 105 KKEQTTFHMARLFGVKHINC-GLL-----EKIPEEQIIVALGELCDRA---EELIIGLEFMPY----SGVADLQAAWRVA 171 (296)
T ss_dssp HHHHHHHHHHHHHTCCEEEE-CCC-----SCCCHHHHHHHHHHHHHHH---TTSEEEEECCTT----SSSCSHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEE-cCC-----CCCCHHHHHHHHHHHHHHh---cCCEEEEEecCC----CCCCCHHHHHHHH
Confidence 34556667777788777655 532 0112344555555544432 4578999996 3 2256777766555
Q ss_pred HHH
Q 024925 235 AAL 237 (260)
Q Consensus 235 ~~I 237 (260)
+.+
T Consensus 172 ~~v 174 (296)
T 2g0w_A 172 EAC 174 (296)
T ss_dssp HHH
T ss_pred HHh
Confidence 443
No 72
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=45.79 E-value=52 Score=27.45 Aligned_cols=20 Identities=5% Similarity=0.144 Sum_probs=10.0
Q ss_pred EEeecccccCHHHHHHHHHH
Q 024925 57 VGGNWKCNGTKESITKLVSD 76 (260)
Q Consensus 57 IigNWKmn~t~~~~~~l~~~ 76 (260)
|+++--+.++..+..+.+++
T Consensus 4 ~G~~~~~~~~~~~~l~~~~~ 23 (287)
T 2x7v_A 4 IGAHMPISKGFDRVPQDTVN 23 (287)
T ss_dssp EEEECCCTTCGGGHHHHHHH
T ss_pred eeeeeccccCHHHHHHHHHH
Confidence 45554444454555554444
No 73
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=45.78 E-value=34 Score=28.72 Aligned_cols=29 Identities=17% Similarity=0.097 Sum_probs=16.2
Q ss_pred ceEEEEcccccccCCCCCCHHHHHHHHHH
Q 024925 208 NVVIAYEPVWAIGTGKVATPEQAQEVHAA 236 (260)
Q Consensus 208 ~iiIAYEPvWAIGTG~~aspe~iqe~~~~ 236 (260)
.+.|++||..--.+....+++++.++.+.
T Consensus 146 gv~l~lEn~~~~~~~~~~~~~~~~~l~~~ 174 (290)
T 2qul_A 146 GIIYALEVVNRFEQWLCNDAKEAIAFADA 174 (290)
T ss_dssp TCEEEEECCCTTTCSSCCSHHHHHHHHHH
T ss_pred CCEEEEEeCccccccccCCHHHHHHHHHH
Confidence 46788888642233344566665554433
No 74
>1eo1_A Hypothetical protein MTH1175; mixed A/B protein, mixed beta sheet, strand order 321456; NMR {Methanothermobacterthermautotrophicus} SCOP: c.55.5.1
Probab=45.42 E-value=21 Score=27.28 Aligned_cols=44 Identities=18% Similarity=0.262 Sum_probs=32.1
Q ss_pred ccccCHHHHHhcCCCEEEeeecccccccCCCHHHHHHHH-HHHHHCCCeEEEEeCCcH
Q 024925 124 TGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKA-AYALSEGLGVIACIGEQL 180 (260)
Q Consensus 124 TGEISa~mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv-~~Al~~gL~pIlCIGE~l 180 (260)
.|...++.|++.||+.||.|. +++ +. ....+.|+.++.+.+.+.
T Consensus 53 ~g~~~~~~l~~~gv~~vi~~~------iG~-------~a~~~L~~~GI~v~~~~~~~i 97 (124)
T 1eo1_A 53 AGIRTAQIIANNGVKAVIASS------PGP-------NAFEVLNELGIKIYRATGTSV 97 (124)
T ss_dssp CSTTHHHHHHHTTCCEEEECC------SSH-------HHHHHHHHHTCEEEECCSCCH
T ss_pred CCHHHHHHHHHCCCCEEEECC------cCH-------HHHHHHHHCCCEEEEcCCCCH
Confidence 466889999999999999996 233 22 334567999998655443
No 75
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=45.38 E-value=12 Score=31.29 Aligned_cols=76 Identities=11% Similarity=0.014 Sum_probs=35.5
Q ss_pred HHHHHHHHHHCCCeEEEE-eCCc-HHHHhcCChHHHHHHHHHHHHhcCCCCCceEEEEccc-----ccccCCCCCCHHHH
Q 024925 158 IGKKAAYALSEGLGVIAC-IGEQ-LQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPV-----WAIGTGKVATPEQA 230 (260)
Q Consensus 158 I~~Kv~~Al~~gL~pIlC-IGE~-leere~g~~~~vl~~Ql~~~l~~i~~~~~iiIAYEPv-----WAIGTG~~aspe~i 230 (260)
+.+-++.|.+.|...|++ ++.. ....+ ...+.+.+.|+.+.+.. ....|.|+|||. |-..+....+++++
T Consensus 86 ~~~~i~~A~~lG~~~v~~~~~p~~~~~~~--~~~~~~~~~l~~l~~~a-~~~Gv~l~lE~~~~~~~~~~~~~~~~~~~~~ 162 (281)
T 3u0h_A 86 LPDRARLCARLGARSVTAFLWPSMDEEPV--RYISQLARRIRQVAVEL-LPLGMRVGLEYVGPHHLRHRRYPFVQSLADL 162 (281)
T ss_dssp HHHHHHHHHHTTCCEEEEECCSEESSCHH--HHHHHHHHHHHHHHHHH-GGGTCEEEEECCCCGGGCCSSEECCCSHHHH
T ss_pred HHHHHHHHHHcCCCEEEEeecCCCCCcch--hhHHHHHHHHHHHHHHH-HHcCCEEEEEeccccccccccccccCCHHHH
Confidence 445557777778776653 1111 00000 12223334444333221 123467899986 22222335567766
Q ss_pred HHHHHH
Q 024925 231 QEVHAA 236 (260)
Q Consensus 231 qe~~~~ 236 (260)
.++.+.
T Consensus 163 ~~l~~~ 168 (281)
T 3u0h_A 163 KTFWEA 168 (281)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555443
No 76
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=45.27 E-value=33 Score=30.86 Aligned_cols=48 Identities=13% Similarity=0.015 Sum_probs=33.8
Q ss_pred CHHHHHhcCCCEEEee-ecccccccCCCHHHHHHHHHHHHHCCCeEEEEe
Q 024925 128 SVEQLKDIGCKWVVLG-HSERRHVIGEDDQFIGKKAAYALSEGLGVIACI 176 (260)
Q Consensus 128 Sa~mLkd~G~~~viIG-HSERR~~f~Etd~~I~~Kv~~Al~~gL~pIlCI 176 (260)
.-+.||++|+++|=+. +-+-.- -.-+.+.+...++.|.++||++++-+
T Consensus 32 ~~~ilk~~G~n~vRlri~v~P~~-g~~d~~~~~~~~~~ak~~Gl~v~ld~ 80 (334)
T 1fob_A 32 LETILADAGINSIRQRVWVNPSD-GSYDLDYNLELAKRVKAAGMSLYLDL 80 (334)
T ss_dssp HHHHHHHHTCCEEEEEECSCCTT-CTTCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHcCCCEEEEEEEECCCC-CccCHHHHHHHHHHHHHCCCEEEEEe
Confidence 4688999999999882 100000 11234667778899999999999985
No 77
>3ohe_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.20A {Marinobacter aquaeolei}
Probab=42.84 E-value=25 Score=27.77 Aligned_cols=30 Identities=33% Similarity=0.471 Sum_probs=25.0
Q ss_pred ccccccCCCCCCHHHHHHHHHHHHHHHHhh
Q 024925 215 PVWAIGTGKVATPEQAQEVHAALRDWLKNM 244 (260)
Q Consensus 215 PvWAIGTG~~aspe~iqe~~~~IR~~l~~~ 244 (260)
|+|.-+.....++++.+++.+.||+.|+++
T Consensus 107 ~vw~~~~~~~~~~eel~~~~~~ir~~L~~~ 136 (137)
T 3ohe_A 107 PVWGKQPPVPYTEEQQASVKAKLQPLLEQL 136 (137)
T ss_dssp CCTTSSCCCCCCHHHHHHHHHHHHHHHHHT
T ss_pred ccccCCCCCCCCHHHHHHHHHHHHHHHHhc
Confidence 678666667789999999999999998753
No 78
>1xvl_A Mn transporter, MNTC protein; manganese, ABC-type transport systems, photosynthesis, cyanobacteria, disulfide bond, metal transport; 2.90A {Synechocystis SP} SCOP: c.92.2.2
Probab=41.75 E-value=43 Score=30.13 Aligned_cols=50 Identities=22% Similarity=0.296 Sum_probs=34.7
Q ss_pred HHHHHHHHHHhcCCCCCceEEEEcccc---------------cccCCCCCCHHHHHHHHHHHHHH
Q 024925 191 VCFQQLKAYADAIPSWDNVVIAYEPVW---------------AIGTGKVATPEQAQEVHAALRDW 240 (260)
Q Consensus 191 vl~~Ql~~~l~~i~~~~~iiIAYEPvW---------------AIGTG~~aspe~iqe~~~~IR~~ 240 (260)
.+.++++..++.++...+.+|.|+|.| .+.+|..++|.+++++.+.||+.
T Consensus 188 ~Ld~~~~~~l~~~~~~~r~~v~~H~af~Yfa~~yGL~~~~~~~~~~~~eps~~~l~~l~~~ik~~ 252 (321)
T 1xvl_A 188 AIDRQLGADLEQVPANQRFLVSCEGAFSYLARDYGMEEIYMWPINAEQQFTPKQVQTVIEEVKTN 252 (321)
T ss_dssp HHHHHHHHHHTTSCGGGCEEEEEESTTHHHHHHTTCEEEEEESSSSSCSCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhhCcccCCEEEEECchHHHHHHHCCCeEEEeeccCCCCCCCHHHHHHHHHHHHHc
Confidence 344555555665553345567787766 35578899999999999998874
No 79
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=41.48 E-value=1.2e+02 Score=25.25 Aligned_cols=88 Identities=16% Similarity=0.085 Sum_probs=50.5
Q ss_pred HHHHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCc-HHHHhcCChHHHHHHHHHHHHh---cCC
Q 024925 129 VEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQ-LQEREAGKTFDVCFQQLKAYAD---AIP 204 (260)
Q Consensus 129 a~mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pIlCIGE~-leere~g~~~~vl~~Ql~~~l~---~i~ 204 (260)
.+++.++|++++.+- -|- +++.+..-++.+.+.|+.+++-+..+ ..+ .++.++. ..
T Consensus 80 i~~~~~agad~v~vH-~~~------~~~~~~~~~~~i~~~g~~igv~~~p~t~~e------------~~~~~~~~~~~~- 139 (228)
T 1h1y_A 80 VEPLAKAGASGFTFH-IEV------SRDNWQELIQSIKAKGMRPGVSLRPGTPVE------------EVFPLVEAENPV- 139 (228)
T ss_dssp HHHHHHHTCSEEEEE-GGG------CTTTHHHHHHHHHHTTCEEEEEECTTSCGG------------GGHHHHHSSSCC-
T ss_pred HHHHHHcCCCEEEEC-CCC------cccHHHHHHHHHHHcCCCEEEEEeCCCCHH------------HHHHHHhcCCCC-
Confidence 788888999999773 221 12211334466778899998888422 111 1334444 33
Q ss_pred CCCceEEEEcccccccCCCCCCHHHHHHHHHHHHHHH
Q 024925 205 SWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWL 241 (260)
Q Consensus 205 ~~~~iiIAYEPvWAIGTG~~aspe~iqe~~~~IR~~l 241 (260)
+ +|.+=++...++|....++..+ -.+.+|+..
T Consensus 140 d----~vl~~sv~pg~~g~~~~~~~l~-~i~~~~~~~ 171 (228)
T 1h1y_A 140 E----LVLVMTVEPGFGGQKFMPEMME-KVRALRKKY 171 (228)
T ss_dssp S----EEEEESSCTTCSSCCCCGGGHH-HHHHHHHHC
T ss_pred C----EEEEEeecCCCCcccCCHHHHH-HHHHHHHhc
Confidence 2 5666666666677666554443 344555543
No 80
>1rdu_A Conserved hypothetical protein; atnos, candid, structural genomics, joint center for structu genomics, JCSG, protein structure initiative; NMR {Thermotoga maritima} SCOP: c.55.5.1
Probab=41.28 E-value=25 Score=26.35 Aligned_cols=45 Identities=20% Similarity=0.323 Sum_probs=32.9
Q ss_pred ccccCHHHHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCcH
Q 024925 124 TGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQL 180 (260)
Q Consensus 124 TGEISa~mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pIlCIGE~l 180 (260)
.|...++.|++.||+.||.|+- ++.-. ....+.|+.++.+.+.+.
T Consensus 50 ~g~~~~~~l~~~gv~~vi~~~i------G~~a~------~~L~~~GI~v~~~~~~~i 94 (116)
T 1rdu_A 50 TGPKVVQSLVSKGVEYLIASNV------GRNAF------ETLKAAGVKVYRFEGGTV 94 (116)
T ss_dssp SSCSHHHHHHTTTCCEEECSSC------CSSCH------HHHHTTTCEEECCCSCBH
T ss_pred ccHHHHHHHHHcCCCEEEECCC------CHhHH------HHHHHCCCEEEECCCCCH
Confidence 3567899999999999999973 33322 335678999998655443
No 81
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=40.48 E-value=57 Score=28.67 Aligned_cols=47 Identities=9% Similarity=0.273 Sum_probs=31.0
Q ss_pred HHHHHHHHHhcCCCCCceEEEEcccc---------------cccCCCCCCHHHHHHHHHHHHHH
Q 024925 192 CFQQLKAYADAIPSWDNVVIAYEPVW---------------AIGTGKVATPEQAQEVHAALRDW 240 (260)
Q Consensus 192 l~~Ql~~~l~~i~~~~~iiIAYEPvW---------------AIGTG~~aspe~iqe~~~~IR~~ 240 (260)
+.++++..++.++ .+-+|.|+|.| .+.+|..++|.+++++.+.||+.
T Consensus 166 Ld~~~~~~l~~~~--~~~~v~~H~af~Yf~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~ 227 (286)
T 3gi1_A 166 LTEEYTQKFKKVR--SKTFVTQHTAFSYLAKRFGLKQLGISGISPEQEPSPRQLKEIQDFVKEY 227 (286)
T ss_dssp HHHHHHHHHTTCS--CCEEEEEESCCHHHHHHTTCEEEEEECSCC---CCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCC--CCEEEEECCchHHHHHHCCCeEeeccccCCCCCCCHHHHHHHHHHHHHc
Confidence 4445555555543 35578899855 35568889999999999999873
No 82
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=38.95 E-value=70 Score=27.45 Aligned_cols=52 Identities=10% Similarity=0.099 Sum_probs=37.9
Q ss_pred CHHHHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCc
Q 024925 128 SVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQ 179 (260)
Q Consensus 128 Sa~mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pIlCIGE~ 179 (260)
..+.||++|++.|=+.|++.-.+-.+.-+.+.+=+..|.++||.+|+.+-..
T Consensus 36 ~~~~i~~~G~N~VRi~~~~~~~~~~~~~~~ld~~v~~a~~~Gi~Vild~H~~ 87 (294)
T 2whl_A 36 AIPAIAEQGANTIRIVLSDGGQWEKDDIDTIREVIELAEQNKMVAVVEVHDA 87 (294)
T ss_dssp HHHHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHTTTCEEEEEECTT
T ss_pred HHHHHHHcCCCEEEEEecCCCccCccHHHHHHHHHHHHHHCCCEEEEEeccC
Confidence 4678899999999888874322222344456666799999999999988644
No 83
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A*
Probab=38.16 E-value=1.6e+02 Score=26.14 Aligned_cols=58 Identities=19% Similarity=0.272 Sum_probs=36.6
Q ss_pred ccccccCHHHHHhcCCCEEEeeecccccc-------cCCC-HHHHHHHHHHHHHCCCeEEEEeCCc
Q 024925 122 AFTGEISVEQLKDIGCKWVVLGHSERRHV-------IGED-DQFIGKKAAYALSEGLGVIACIGEQ 179 (260)
Q Consensus 122 A~TGEISa~mLkd~G~~~viIGHSERR~~-------f~Et-d~~I~~Kv~~Al~~gL~pIlCIGE~ 179 (260)
++|-+-..+.|++.|++.|=|-=+=.|.. +++. -+.+.+=|..|.++||.+||.+=-.
T Consensus 41 p~~t~~di~~i~~~G~n~vRipi~w~~~~~~~~~~~~~~~~l~~l~~~v~~a~~~Gi~vildlH~~ 106 (345)
T 3ndz_A 41 PMTTHAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDNDMYVIINLHHE 106 (345)
T ss_dssp CCCCHHHHHHHHHHTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEECCCSC
T ss_pred CCCcHHHHHHHHHCCCCEEEEeeehHHhCCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEecCCc
Confidence 44545556678889998886543322211 1111 2456666799999999999987543
No 84
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=37.36 E-value=1.9e+02 Score=27.30 Aligned_cols=58 Identities=19% Similarity=0.272 Sum_probs=35.7
Q ss_pred ccccccCHHHHHhcCCCEEEeeecccccc-------cCCC-HHHHHHHHHHHHHCCCeEEEEeCCc
Q 024925 122 AFTGEISVEQLKDIGCKWVVLGHSERRHV-------IGED-DQFIGKKAAYALSEGLGVIACIGEQ 179 (260)
Q Consensus 122 A~TGEISa~mLkd~G~~~viIGHSERR~~-------f~Et-d~~I~~Kv~~Al~~gL~pIlCIGE~ 179 (260)
+++-+--.+.||++|++.|=|-=+=.|.. +++. -+.+.+-|..|.++||.+||.+-..
T Consensus 44 ~~~t~~di~~i~~~G~N~vRipi~w~~~~~~~~~~~~~~~~l~~~d~vv~~a~~~Gi~vildlH~~ 109 (515)
T 3icg_A 44 PMTTHAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDNDMYVIINLHHE 109 (515)
T ss_dssp CCCCHHHHHHHHHHTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEEECCSC
T ss_pred CcCCHHHHHHHHHCCCCEEEEccchHHhCCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEecCCC
Confidence 34444446678888888876532211111 1111 1456677799999999999998543
No 85
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=37.31 E-value=65 Score=27.48 Aligned_cols=87 Identities=17% Similarity=0.088 Sum_probs=50.7
Q ss_pred HHHHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCChHHHHHHHHHHHHhcCCCCCc
Q 024925 129 VEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDN 208 (260)
Q Consensus 129 a~mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pIlCIGE~leere~g~~~~vl~~Ql~~~l~~i~~~~~ 208 (260)
.+++.++|++++.+ |.|-- ..+.+-++.+.+.|+.+.+-+.-... .++++.++..++
T Consensus 80 i~~~~~aGad~itv-H~Ea~-------~~~~~~i~~i~~~G~k~gval~p~t~-----------~e~l~~~l~~~D---- 136 (228)
T 3ovp_A 80 VKPMAVAGANQYTF-HLEAT-------ENPGALIKDIRENGMKVGLAIKPGTS-----------VEYLAPWANQID---- 136 (228)
T ss_dssp HHHHHHHTCSEEEE-EGGGC-------SCHHHHHHHHHHTTCEEEEEECTTSC-----------GGGTGGGGGGCS----
T ss_pred HHHHHHcCCCEEEE-ccCCc-------hhHHHHHHHHHHcCCCEEEEEcCCCC-----------HHHHHHHhccCC----
Confidence 68899999999999 66642 12445557788999999888852211 012334444332
Q ss_pred eEEEEcccccccCCCCCCHHHHHHHHHHHHHH
Q 024925 209 VVIAYEPVWAIGTGKVATPEQAQEVHAALRDW 240 (260)
Q Consensus 209 iiIAYEPvWAIGTG~~aspe~iqe~~~~IR~~ 240 (260)
+|.+=.++.-.+|+...|+...+ ++.+|+.
T Consensus 137 -~Vl~msv~pGf~Gq~f~~~~l~k-i~~lr~~ 166 (228)
T 3ovp_A 137 -MALVMTVEPGFGGQKFMEDMMPK-VHWLRTQ 166 (228)
T ss_dssp -EEEEESSCTTTCSCCCCGGGHHH-HHHHHHH
T ss_pred -eEEEeeecCCCCCcccCHHHHHH-HHHHHHh
Confidence 23343444444677666655443 3344543
No 86
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=36.81 E-value=1.6e+02 Score=25.63 Aligned_cols=153 Identities=16% Similarity=0.099 Sum_probs=81.7
Q ss_pred cCHHHHHHHHHHHhhccccCCceEEEc---CCcccHHH---HHHHcC-CCceEeeeccccCCCcccccccC---HHHHHh
Q 024925 65 GTKESITKLVSDLNDAKLEADVDVVVA---PPFVYIDQ---VKNSLT-DRIEIAAQNSWVGKGGAFTGEIS---VEQLKD 134 (260)
Q Consensus 65 ~t~~~~~~l~~~l~~~~~~~~v~Vvva---Pp~~~L~~---v~~~~~-~~i~vgAQnv~~~~~GA~TGEIS---a~mLkd 134 (260)
.+.+++.+.++.+.+. .--.|++. ||+...+. +.+.++ ..+.|.. . +|.++ .+.|++
T Consensus 84 ls~eei~~~i~~~~~~---g~~~i~~~gGe~p~~~~~~~~~li~~i~~~~~~i~~------s----~g~l~~e~l~~L~~ 150 (348)
T 3iix_A 84 MTPEEIVERARLAVQF---GAKTIVLQSGEDPYXMPDVISDIVKEIKKMGVAVTL------S----LGEWPREYYEKWKE 150 (348)
T ss_dssp CCHHHHHHHHHHHHHT---TCSEEEEEESCCGGGTTHHHHHHHHHHHTTSCEEEE------E----CCCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHC---CCCEEEEEeCCCCCccHHHHHHHHHHHHhcCceEEE------e----cCCCCHHHHHHHHH
Confidence 4667777777665432 11234443 45543333 333333 2233321 1 23444 456778
Q ss_pred cCCCEEEeee----ccccccc--CCCHHHHHHHHHHHHHCCCeEEEEe-----CCcHHHHhcCChHHHHHHHHHHHHhcC
Q 024925 135 IGCKWVVLGH----SERRHVI--GEDDQFIGKKAAYALSEGLGVIACI-----GEQLQEREAGKTFDVCFQQLKAYADAI 203 (260)
Q Consensus 135 ~G~~~viIGH----SERR~~f--~Etd~~I~~Kv~~Al~~gL~pIlCI-----GE~leere~g~~~~vl~~Ql~~~l~~i 203 (260)
.|++.+.+|+ .|.+..+ +.+-+.+-+-++.+.+.|+.+-..+ ||+.++.. +-+.- +..+
T Consensus 151 ag~~~v~i~let~~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi~v~~~~i~G~p~et~e~~~---------~~~~~-l~~l 220 (348)
T 3iix_A 151 AGADRYLLRHETANPVLHRKLRPDTSFENRLNCLLTLKELGYETGAGSMVGLPGQTIDDLV---------DDLLF-LKEH 220 (348)
T ss_dssp HTCCEEECCCBCSCHHHHHHHSTTSCHHHHHHHHHHHHHTTCEEEECBEESCTTCCHHHHH---------HHHHH-HHHH
T ss_pred hCCCEEeeeeeeCCHHHHHHhCCCcCHHHHHHHHHHHHHhCCeeccceEEeCCCCCHHHHH---------HHHHH-HHhc
Confidence 8999999874 2322222 2477778888899999999643322 56665432 22221 1111
Q ss_pred CCCCc-eEEEEcccccccCC----CCCCHHHHHHHHHHHHHHHHh
Q 024925 204 PSWDN-VVIAYEPVWAIGTG----KVATPEQAQEVHAALRDWLKN 243 (260)
Q Consensus 204 ~~~~~-iiIAYEPvWAIGTG----~~aspe~iqe~~~~IR~~l~~ 243 (260)
. .+. -+..|-|.- ||. ...++++...+++..|..+..
T Consensus 221 ~-~~~i~i~~~~p~~--gt~l~~~~~~~~~e~~~~~a~~R~~lp~ 262 (348)
T 3iix_A 221 D-FDMVGIGPFIPHP--DTPLANEKKGDFTLTLKMVALTRILLPD 262 (348)
T ss_dssp T-CSEECCEECCCCT--TSTTTTSCCCCHHHHHHHHHHHHHHSTT
T ss_pred C-CCEEeeeeeecCC--CCCcccCCCCCHHHHHHHHHHHHHHCCC
Confidence 1 011 123455632 443 246789988999988877643
No 87
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=36.79 E-value=83 Score=28.46 Aligned_cols=61 Identities=18% Similarity=0.215 Sum_probs=37.9
Q ss_pred CCceEEEcCCcccHHH---HHHHcCCCceEeeeccccCCCcccccccCHHHHHhcCCCEEEeeecccccc
Q 024925 84 ADVDVVVAPPFVYIDQ---VKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHV 150 (260)
Q Consensus 84 ~~v~VvvaPp~~~L~~---v~~~~~~~i~vgAQnv~~~~~GA~TGEISa~mLkd~G~~~viIGHSERR~~ 150 (260)
.+.+.++.+..+.... +.+.+. +.+-+ |+- ..| -|...|.+.|+++|++.|+.|.+=-|..
T Consensus 187 AGAD~i~~e~~~~~~~~~~i~~~~~--~P~~~-n~~--~~g-~tp~~~~~eL~~lGv~~v~~~~~~~raa 250 (305)
T 3ih1_A 187 AGADAIFPEALQSEEEFRLFNSKVN--APLLA-NMT--EFG-KTPYYSAEEFANMGFQMVIYPVTSLRVA 250 (305)
T ss_dssp HTCSEEEETTCCSHHHHHHHHHHSC--SCBEE-ECC--TTS-SSCCCCHHHHHHTTCSEEEECSHHHHHH
T ss_pred cCCCEEEEcCCCCHHHHHHHHHHcC--CCEEE-eec--CCC-CCCCCCHHHHHHcCCCEEEEchHHHHHH
Confidence 3566666654444444 444443 33321 332 223 3566899999999999999998877754
No 88
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=36.06 E-value=92 Score=26.73 Aligned_cols=52 Identities=10% Similarity=0.014 Sum_probs=36.4
Q ss_pred cCHHHHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 024925 127 ISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 178 (260)
Q Consensus 127 ISa~mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pIlCIGE 178 (260)
-..+.||++|++.|=+.|+..-..-...-+.+.+-+..|.++||.+|+.+-.
T Consensus 36 ~~~~~lk~~G~N~VRi~~~~~~~w~~~~~~~ld~~v~~a~~~Gi~Vild~h~ 87 (302)
T 1bqc_A 36 QAFADIKSHGANTVRVVLSNGVRWSKNGPSDVANVISLCKQNRLICMLEVHD 87 (302)
T ss_dssp THHHHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHHTTCEEEEEEGG
T ss_pred HHHHHHHHcCCCEEEEEccCCcccCCCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 3567889999999988876421111122345666679999999999998853
No 89
>3i24_A HIT family hydrolase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.50A {Vibrio fischeri ES114}
Probab=35.86 E-value=31 Score=27.76 Aligned_cols=32 Identities=34% Similarity=0.561 Sum_probs=26.7
Q ss_pred ccccccCCCCCCHHHHHHHHHHHHHHHHhhcC
Q 024925 215 PVWAIGTGKVATPEQAQEVHAALRDWLKNMSQ 246 (260)
Q Consensus 215 PvWAIGTG~~aspe~iqe~~~~IR~~l~~~~~ 246 (260)
|+|.-+.....++++.+++.+.||+.|.+..+
T Consensus 107 ~vw~~~~~~~~~~eel~~~a~kIr~~L~~~~~ 138 (149)
T 3i24_A 107 PVWGNTTGVIRAQSSQTQLVDLLRDKLSNISG 138 (149)
T ss_dssp CSTTCSCCCBCCHHHHHHHHHHHHHHHTTSTT
T ss_pred ceecCCCCCCCCHHHHHHHHHHHHHHHHhccc
Confidence 78877677788999999999999999976443
No 90
>2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3
Probab=35.49 E-value=2.1e+02 Score=24.54 Aligned_cols=48 Identities=13% Similarity=0.074 Sum_probs=30.4
Q ss_pred HHHHHhcCCCEEEee-eccccc--------cc-CC--C-HHHHHHHHHHHHHCCCeEEEEe
Q 024925 129 VEQLKDIGCKWVVLG-HSERRH--------VI-GE--D-DQFIGKKAAYALSEGLGVIACI 176 (260)
Q Consensus 129 a~mLkd~G~~~viIG-HSERR~--------~f-~E--t-d~~I~~Kv~~Al~~gL~pIlCI 176 (260)
.+.+|++|++.|=+. |.+-.. .. .+ . =+.+.+=+..|.++||.+|+++
T Consensus 51 ~~~~k~~G~N~vR~~~~~~~~~~p~~~~~g~~~~~~~~~~~~ld~~~~~a~~~Gi~vil~l 111 (353)
T 2c0h_A 51 LSDMQSHGGNSVRVWLHIEGESTPEFDNNGYVTGIDNTLISDMRAYLHAAQRHNILIFFTL 111 (353)
T ss_dssp HHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEECCTTHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHcCCCEEEEceecCCccCccccCCCccccCCHHHHHHHHHHHHHHHHcCCEEEEEc
Confidence 356789999999775 765221 01 11 1 1123344588999999999986
No 91
>3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=35.21 E-value=1.8e+02 Score=28.95 Aligned_cols=97 Identities=16% Similarity=0.203 Sum_probs=57.3
Q ss_pred HHHHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEEEEe---CCcHHHHhcCChHHHHHHHHHHHHhcCCC
Q 024925 129 VEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACI---GEQLQEREAGKTFDVCFQQLKAYADAIPS 205 (260)
Q Consensus 129 a~mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pIlCI---GE~leere~g~~~~vl~~Ql~~~l~~i~~ 205 (260)
.+++|++|++.+=+-| .-++++.. ..|=+.||.++.-+ |.. .... .+...++++.++.....
T Consensus 324 l~l~k~~G~N~iR~~h------~p~~~~~~----dlcDe~Gi~V~~E~~~~~~~----~~~~-~~~~~~~~~~~v~r~rN 388 (692)
T 3fn9_A 324 LAAIMDVGATTVRFAH------YQQSDYLY----SRCDTLGLIIWAEIPCVNRV----TGYE-TENAQSQLRELIRQSFN 388 (692)
T ss_dssp HHHHHHHTCCEEEETT------SCCCHHHH----HHHHHHTCEEEEECCCBSCC----CSSC-HHHHHHHHHHHHHHHTT
T ss_pred HHHHHHCCCCEEEecC------CCCcHHHH----HHHHHCCCEEEEcccccCCC----CCHH-HHHHHHHHHHHHHHhcC
Confidence 3478999999998876 45667776 78999999998533 221 0111 34455666665543222
Q ss_pred CCceEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhhc
Q 024925 206 WDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNMS 245 (260)
Q Consensus 206 ~~~iiIAYEPvWAIGTG~~aspe~iqe~~~~IR~~l~~~~ 245 (260)
-..|+ . |.+|.-.....+...+..+.+.+++++..
T Consensus 389 HPSIi-~----Ws~gNE~~~~~~~~~~~~~~l~~~~k~~D 423 (692)
T 3fn9_A 389 HPSIY-V----WGLHNEVYQPHEYTAALTRSLHDLAKTED 423 (692)
T ss_dssp CTTEE-E----EEEEESCCSSHHHHHHHHHHHHHHHHHHC
T ss_pred CCcce-E----EEeccccCcccccHHHHHHHHHHHHHHHC
Confidence 23343 3 77775333233444555666666666654
No 92
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482}
Probab=35.17 E-value=52 Score=32.64 Aligned_cols=49 Identities=20% Similarity=0.181 Sum_probs=36.3
Q ss_pred HHHHHhcCCCEEEee-----ecccccccCCCH-HHHHHHHHHHHHCCCeEEEEeC
Q 024925 129 VEQLKDIGCKWVVLG-----HSERRHVIGEDD-QFIGKKAAYALSEGLGVIACIG 177 (260)
Q Consensus 129 a~mLkd~G~~~viIG-----HSERR~~f~Etd-~~I~~Kv~~Al~~gL~pIlCIG 177 (260)
.+++|++|++.|-++ |--.+-.|..+- ..+.+=++.|-+.||.+|++.|
T Consensus 43 l~~mK~~G~N~Vrt~v~W~~hEP~~G~ydf~gl~~l~~fl~la~e~GL~VIl~~g 97 (612)
T 3d3a_A 43 IKMCKALGMNTICLYVFWNFHEPEEGRYDFAGQKDIAAFCRLAQENGMYVIVRPG 97 (612)
T ss_dssp HHHHHHHTCCEEEEECCHHHHCSSTTCCCCSGGGCHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHcCCCEEEEcChHHhcCCCCCccChhHHHHHHHHHHHHHHCCCEEEEecC
Confidence 357999999999999 877665555432 1233334889999999999886
No 93
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=34.46 E-value=1.9e+02 Score=26.11 Aligned_cols=77 Identities=12% Similarity=0.191 Sum_probs=45.0
Q ss_pred CCceEEEcCCcccHHHHHHHcCCCceEeeeccccCCCcccccc----cCHHHHHhcCCCEEEeeecccccccCCC-HHHH
Q 024925 84 ADVDVVVAPPFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGE----ISVEQLKDIGCKWVVLGHSERRHVIGED-DQFI 158 (260)
Q Consensus 84 ~~v~VvvaPp~~~L~~v~~~~~~~i~vgAQnv~~~~~GA~TGE----ISa~mLkd~G~~~viIGHSERR~~f~Et-d~~I 158 (260)
.+++-+||+|.- +..+.+.....+.+-.--+.+ .|.-.|+ .++....+.|+++.++| |-+|+-. -...
T Consensus 170 ~G~dGvV~s~~E-~~~IR~~~~~~fl~VTPGIr~--qG~~~~DQ~Rv~t~~~a~~aGAd~iVvG----r~I~~a~dp~~a 242 (303)
T 3ru6_A 170 NGLDGMVCSVFE-SKKIKEHTSSNFLTLTPGIRP--FGETNDDQKRVANLAMARENLSDYIVVG----RPIYKNENPRAV 242 (303)
T ss_dssp TTCSEEECCTTT-HHHHHHHSCTTSEEEECCCCT--TC--------CCSHHHHHHTTCSEEEEC----HHHHTSSCHHHH
T ss_pred cCCCEEEECHHH-HHHHHHhCCCccEEECCCcCc--ccCCcccccccCCHHHHHHcCCCEEEEC----hHHhCCCCHHHH
Confidence 467778887654 566666655445432223332 2444565 58999999999999999 5666643 3444
Q ss_pred HHHHHHHHH
Q 024925 159 GKKAAYALS 167 (260)
Q Consensus 159 ~~Kv~~Al~ 167 (260)
.++++..++
T Consensus 243 ~~~i~~~i~ 251 (303)
T 3ru6_A 243 CEKILNKIH 251 (303)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHHH
Confidence 555555443
No 94
>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A 2xy4_A* 2xqv_A* 2xh8_A
Probab=34.32 E-value=74 Score=27.73 Aligned_cols=48 Identities=6% Similarity=0.105 Sum_probs=33.9
Q ss_pred HHHHHHHHHHhcCCCCCceEEEEcccc---------------cccCCCCCCHHHHHHHHHHHHHH
Q 024925 191 VCFQQLKAYADAIPSWDNVVIAYEPVW---------------AIGTGKVATPEQAQEVHAALRDW 240 (260)
Q Consensus 191 vl~~Ql~~~l~~i~~~~~iiIAYEPvW---------------AIGTG~~aspe~iqe~~~~IR~~ 240 (260)
.+..+++..+..++ .+-+|.|+|.| .+.+|..++|.+++++.+.||+.
T Consensus 160 ~Ld~~~~~~l~~~~--~~~~v~~H~af~Yf~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~ 222 (284)
T 2prs_A 160 STETQVGNELAPLK--GKGYFVFHDAYGYFEKQFGLTPLGHFTVNPEIQPGAQRLHEIRTQLVEQ 222 (284)
T ss_dssp HHHHHHHHHHGGGT--TCCEEEEESCCHHHHHHHTCCCCEEEESSTTSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCC--CCeEEEECccHHHHHHHCCCeEeEeeccCCCCCCCHHHHHHHHHHHHHc
Confidence 34455555555554 24467888854 35568889999999999999874
No 95
>4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A
Probab=33.74 E-value=44 Score=33.25 Aligned_cols=49 Identities=22% Similarity=0.075 Sum_probs=37.0
Q ss_pred HHHHHhcCCCEEEe-----eecccccccCCC-HHHHHHHHHHHHHCCCeEEEEeC
Q 024925 129 VEQLKDIGCKWVVL-----GHSERRHVIGED-DQFIGKKAAYALSEGLGVIACIG 177 (260)
Q Consensus 129 a~mLkd~G~~~viI-----GHSERR~~f~Et-d~~I~~Kv~~Al~~gL~pIlCIG 177 (260)
..++|++|++.|-+ .|--++-.|.-+ +..+.+=++.|-++||.+|++.|
T Consensus 38 l~kmKa~G~NtV~~yv~W~~hEP~~G~fdF~g~~dL~~fl~~a~~~Gl~VilrpG 92 (595)
T 4e8d_A 38 LYNLKALGFNTVETYVAWNLHEPCEGEFHFEGDLDLEKFLQIAQDLGLYAIVRPS 92 (595)
T ss_dssp HHHHHHTTCCEEEEECCHHHHCSBTTBCCCSGGGCHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHcCCCEEEEeccHHHcCCCCCeecccchhhHHHHHHHHHHcCCEEEEecC
Confidence 45899999999999 787776555543 22344455889999999999954
No 96
>1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A*
Probab=33.11 E-value=44 Score=35.10 Aligned_cols=45 Identities=20% Similarity=0.262 Sum_probs=37.1
Q ss_pred HHHHHhcCCCEEEe-----eecccccccCCC-----HHHHHHHHHHHHHCCCeEEEEeC
Q 024925 129 VEQLKDIGCKWVVL-----GHSERRHVIGED-----DQFIGKKAAYALSEGLGVIACIG 177 (260)
Q Consensus 129 a~mLkd~G~~~viI-----GHSERR~~f~Et-----d~~I~~Kv~~Al~~gL~pIlCIG 177 (260)
.+++|++|++.|-+ -|-.++-.|.-+ +++| +.|-++||.+|++.|
T Consensus 42 l~kmka~G~NtV~~yvfW~~hEP~~G~fdF~g~~dL~~fl----~~a~e~Gl~ViLr~G 96 (971)
T 1tg7_A 42 FEKVKALGFNCVSFYVDWALLEGNPGHYSAEGIFDLQPFF----DAAKEAGIYLLARPG 96 (971)
T ss_dssp HHHHHTTTCCEEEEECCHHHHCSBTTBCCCCGGGCSHHHH----HHHHHHTCEEEEECC
T ss_pred HHHHHHcCCCEEEEeccHHHhCCCCCeecccchHHHHHHH----HHHHHcCCEEEEecC
Confidence 47889999999999 687777666554 5555 889999999999998
No 97
>3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A*
Probab=32.89 E-value=56 Score=32.85 Aligned_cols=50 Identities=18% Similarity=0.014 Sum_probs=37.6
Q ss_pred CHHHHHhcCCCEEEe-----eecccccccCCCH-HHHHHHHHHHHHCCCeEEEEeC
Q 024925 128 SVEQLKDIGCKWVVL-----GHSERRHVIGEDD-QFIGKKAAYALSEGLGVIACIG 177 (260)
Q Consensus 128 Sa~mLkd~G~~~viI-----GHSERR~~f~Etd-~~I~~Kv~~Al~~gL~pIlCIG 177 (260)
-..++|++|++.|-+ .|--++-.|.-+. ..+.+=++.|-++||.+|++.|
T Consensus 45 ~l~kmKa~G~NtV~~yv~W~~hEP~~G~fdF~g~~DL~~fl~~a~~~GL~ViLr~G 100 (654)
T 3thd_A 45 RLLKMKMAGLNAIQTYVPWNFHEPWPGQYQFSEDHDVEYFLRLAHELGLLVILRPG 100 (654)
T ss_dssp HHHHHHHTTCSEEEEECCHHHHCSBTTBCCCSGGGCHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHcCCCEEEEEechhhcCCCCCccCccchHHHHHHHHHHHHcCCEEEeccC
Confidence 356889999999999 8877665554332 2344445889999999999985
No 98
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=32.84 E-value=23 Score=30.00 Aligned_cols=21 Identities=14% Similarity=0.083 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHHCCCeEEEEe
Q 024925 156 QFIGKKAAYALSEGLGVIACI 176 (260)
Q Consensus 156 ~~I~~Kv~~Al~~gL~pIlCI 176 (260)
+.+.+-++.|.+.|...|++.
T Consensus 90 ~~~~~~i~~a~~lG~~~v~~~ 110 (301)
T 3cny_A 90 EAFEKHCQYLKAINAPVAVVS 110 (301)
T ss_dssp HHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEec
Confidence 345555677777777766554
No 99
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=32.24 E-value=1.2e+02 Score=26.71 Aligned_cols=73 Identities=11% Similarity=0.150 Sum_probs=45.6
Q ss_pred cccHHHHHHHcCCCceEeeeccccCCCcccccccCHHHHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEE
Q 024925 94 FVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 173 (260)
Q Consensus 94 ~~~L~~v~~~~~~~i~vgAQnv~~~~~GA~TGEISa~mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pI 173 (260)
+.+|..+.+... +.|-..+ . +.-+.-.+..+++|++.|++|++--. ++.+..=+..+.+.||.++
T Consensus 102 ~~~l~~ir~~v~--lPvl~kd-----f--iid~~qv~~A~~~GAD~VlLi~a~l~------~~~l~~l~~~a~~lGl~~l 166 (272)
T 3qja_A 102 LDDLDAVRASVS--IPVLRKD-----F--VVQPYQIHEARAHGADMLLLIVAALE------QSVLVSMLDRTESLGMTAL 166 (272)
T ss_dssp HHHHHHHHHHCS--SCEEEES-----C--CCSHHHHHHHHHTTCSEEEEEGGGSC------HHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHhCC--CCEEECc-----c--ccCHHHHHHHHHcCCCEEEEecccCC------HHHHHHHHHHHHHCCCcEE
Confidence 456777766653 3333222 1 11111246777899999999988332 3445544677888999999
Q ss_pred EEeCCcHH
Q 024925 174 ACIGEQLQ 181 (260)
Q Consensus 174 lCIGE~le 181 (260)
+++-...|
T Consensus 167 vev~t~ee 174 (272)
T 3qja_A 167 VEVHTEQE 174 (272)
T ss_dssp EEESSHHH
T ss_pred EEcCCHHH
Confidence 99965443
No 100
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=32.02 E-value=1.5e+02 Score=25.27 Aligned_cols=77 Identities=14% Similarity=0.193 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHCCCeEEEE-eCC-cH------HHHhcCChHHHHHHHHHHHHhcCCCCCceE-EEEcccccccCCCCCCH
Q 024925 157 FIGKKAAYALSEGLGVIAC-IGE-QL------QEREAGKTFDVCFQQLKAYADAIPSWDNVV-IAYEPVWAIGTGKVATP 227 (260)
Q Consensus 157 ~I~~Kv~~Al~~gL~pIlC-IGE-~l------eere~g~~~~vl~~Ql~~~l~~i~~~~~ii-IAYEPvWAIGTG~~asp 227 (260)
.+.+-+..|.+.|...|++ .|- .. ..++ ...+.+.+.|+.+.+... ...|. |++||. ..+.....++
T Consensus 115 ~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~--~~~~~~~~~l~~l~~~a~-~~Gv~~l~lE~~-~~~~~~~~t~ 190 (316)
T 3qxb_A 115 HLKRAIDMTAAMEVPATGMPFGSYSAADALNPARRE--EIYAIARDMWIELAAYAK-RQGLSMLYVEPV-PLATEFPSSA 190 (316)
T ss_dssp HHHHHHHHHHHTTCCEEEECCBBCCHHHHTCHHHHH--HHHHHHHHHHHHHHHHHH-HHTCCEEEECCC-SCTTBSSCSH
T ss_pred HHHHHHHHHHHcCCCEEEecCCCcCccccCCcccHH--HHHHHHHHHHHHHHHHHH-hcCCeEEEEEec-CCccccCCCH
Confidence 3555667888888887765 232 11 1111 112233333443332211 12356 999992 1122334567
Q ss_pred HHHHHHHHHH
Q 024925 228 EQAQEVHAAL 237 (260)
Q Consensus 228 e~iqe~~~~I 237 (260)
+++.++.+.+
T Consensus 191 ~~~~~l~~~v 200 (316)
T 3qxb_A 191 ADAARLMADL 200 (316)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7766555544
No 101
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=31.36 E-value=2.2e+02 Score=23.52 Aligned_cols=45 Identities=11% Similarity=0.056 Sum_probs=30.9
Q ss_pred ccCHHHHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 024925 126 EISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 178 (260)
Q Consensus 126 EISa~mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pIlCIGE 178 (260)
+--++.+.+.|++++++| .+- . + ....=++.+.+.|+.+++++.-
T Consensus 98 ~~~~~~~~~~Gad~v~~~-~~~---~-~---~~~~~~~~~~~~g~~~~~~i~~ 142 (248)
T 1geq_A 98 RNFLAEAKASGVDGILVV-DLP---V-F---HAKEFTEIAREEGIKTVFLAAP 142 (248)
T ss_dssp HHHHHHHHHHTCCEEEET-TCC---G-G---GHHHHHHHHHHHTCEEEEEECT
T ss_pred HHHHHHHHHCCCCEEEEC-CCC---h-h---hHHHHHHHHHHhCCCeEEEECC
Confidence 446778899999999996 321 1 1 1223345666789999998864
No 102
>1nmo_A Hypothetical protein YBGI; toroidal structure, structure 2 project, S2F, structural genomics, unknown function; 2.20A {Escherichia coli} SCOP: c.135.1.1 PDB: 1nmp_A
Probab=31.06 E-value=19 Score=31.31 Aligned_cols=16 Identities=13% Similarity=0.281 Sum_probs=10.1
Q ss_pred HHHHhcCCCEEEeeec
Q 024925 130 EQLKDIGCKWVVLGHS 145 (260)
Q Consensus 130 ~mLkd~G~~~viIGHS 145 (260)
+...+.|++..|-|+-
T Consensus 180 ~~a~~~gaD~~iTGd~ 195 (247)
T 1nmo_A 180 DSAARFGVDAFITGEV 195 (247)
T ss_dssp HHHHHHCCSEEEESCC
T ss_pred HHHHHcCCCEEEEcCc
Confidence 4445567777777764
No 103
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=30.82 E-value=91 Score=27.66 Aligned_cols=57 Identities=23% Similarity=0.310 Sum_probs=38.3
Q ss_pred CCceEEEcCCcccHHH---HHHHcCCCceEeeeccccCCCcccccccCHHHHHhcCCCEEEeeecccccc
Q 024925 84 ADVDVVVAPPFVYIDQ---VKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHV 150 (260)
Q Consensus 84 ~~v~VvvaPp~~~L~~---v~~~~~~~i~vgAQnv~~~~~GA~TGEISa~mLkd~G~~~viIGHSERR~~ 150 (260)
.+.+.++.+-.+.... +.+.+. +.+ |+-. .++-.+.+.|+++|++.|+.|.+--|..
T Consensus 180 AGAd~i~~e~~~~~~~~~~i~~~~~--~P~---n~~~-----~~~~~~~~eL~~lGv~~v~~~~~~~raa 239 (275)
T 2ze3_A 180 AGADGIFVPLALQSQDIRALADALR--VPL---NVMA-----FPGSPVPRALLDAGAARVSFGQSLMLAT 239 (275)
T ss_dssp TTCSEEECTTCCCHHHHHHHHHHCS--SCE---EEEC-----CTTSCCHHHHHHTTCSEEECTTHHHHHH
T ss_pred CCCCEEEECCCCCHHHHHHHHHhcC--CCE---EEec-----CCCCCCHHHHHHcCCcEEEEChHHHHHH
Confidence 5677777765554444 444443 333 4331 1357889999999999999999877754
No 104
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=30.33 E-value=2.3e+02 Score=23.59 Aligned_cols=108 Identities=9% Similarity=0.017 Sum_probs=0.0
Q ss_pred HHHHhcCCCEEE-eeecccccccCCCH-------HHHHHHHHHHHHCCCeEEEE-eCCcHH-HHhcCChHHHHHHHHHHH
Q 024925 130 EQLKDIGCKWVV-LGHSERRHVIGEDD-------QFIGKKAAYALSEGLGVIAC-IGEQLQ-EREAGKTFDVCFQQLKAY 199 (260)
Q Consensus 130 ~mLkd~G~~~vi-IGHSERR~~f~Etd-------~~I~~Kv~~Al~~gL~pIlC-IGE~le-ere~g~~~~vl~~Ql~~~ 199 (260)
+.|++.|++.+. .+-.-...+...+. +.+.+-++.|.+.|...|.+ +.-..- ....+...+...+++...
T Consensus 54 ~~l~~~gl~i~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (294)
T 3vni_A 54 ACAHGNGITLTVGHGPSAEQNLSSPDPDIRKNAKAFYTDLLKRLYKLDVHLIGGALYSYWPIDYTKTIDKKGDWERSVES 133 (294)
T ss_dssp HHHHHTTCEEEEEECCCGGGCTTCSCHHHHHHHHHHHHHHHHHHHHHTCCEEEESTTSCSSCCTTSCCCHHHHHHHHHHH
T ss_pred HHHHHcCCeEEEeecCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCeeeccccCCCCCcCCCCCCHHHHHHHHHHH
Q ss_pred HhcCC---CCCceEEEEcccccccCCCCCCHHHHHHHHHHH
Q 024925 200 ADAIP---SWDNVVIAYEPVWAIGTGKVATPEQAQEVHAAL 237 (260)
Q Consensus 200 l~~i~---~~~~iiIAYEPvWAIGTG~~aspe~iqe~~~~I 237 (260)
+..+- ....|.|+|||..--.+....+++++.++.+.+
T Consensus 134 l~~l~~~a~~~Gv~l~lEn~~~~~~~~~~~~~~~~~l~~~v 174 (294)
T 3vni_A 134 VREVAKVAEACGVDFCLEVLNRFENYLINTAQEGVDFVKQV 174 (294)
T ss_dssp HHHHHHHHHHTTCEEEEECCCTTTCSSCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEEecCcccCcccCCHHHHHHHHHHc
No 105
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*
Probab=29.40 E-value=74 Score=29.73 Aligned_cols=50 Identities=18% Similarity=0.166 Sum_probs=35.0
Q ss_pred cCHHHHHhcCCCEEEeeec-cccc----cc--C-CCHHHHHHHHHHHHHCCCeEEEEe
Q 024925 127 ISVEQLKDIGCKWVVLGHS-ERRH----VI--G-EDDQFIGKKAAYALSEGLGVIACI 176 (260)
Q Consensus 127 ISa~mLkd~G~~~viIGHS-ERR~----~f--~-Etd~~I~~Kv~~Al~~gL~pIlCI 176 (260)
-....||+.|+++|-|.=. +-.. -+ + .+.+.+.+.++.|.++||++++-+
T Consensus 52 d~~~ilk~~G~N~VRlrvwv~p~~~~g~~y~~g~~d~~~~~~~a~~Ak~~GLkVlldf 109 (399)
T 1ur4_A 52 DIFKTLKEAGVNYVRVRIWNDPYDANGNGYGGGNNDLEKAIQIGKRATANGMKLLADF 109 (399)
T ss_dssp CHHHHHHHTTCCEEEEEECSCCBCTTCCBCSTTCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hHHHHHHHCCCCEEEEeeecCCcccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 3577899999999987311 1110 11 1 346678888899999999999974
No 106
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=29.07 E-value=97 Score=25.73 Aligned_cols=73 Identities=12% Similarity=-0.050 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHCCCeEEEE-eCCcHHHHhcCChHHHHHHHHHHHHhcCCCCCceEEEEcccccccCCCCCCHHHHHHHH
Q 024925 156 QFIGKKAAYALSEGLGVIAC-IGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVH 234 (260)
Q Consensus 156 ~~I~~Kv~~Al~~gL~pIlC-IGE~leere~g~~~~vl~~Ql~~~l~~i~~~~~iiIAYEPvWAIGTG~~aspe~iqe~~ 234 (260)
+.+.+-+..|.+.|...|++ .|-. +. +.+.+.++.+++.......+.|++||.+--|+-...+++++.+++
T Consensus 88 ~~~~~~i~~a~~lGa~~vv~h~g~~------~~--~~~~~~l~~l~~~a~~~~gv~l~lEn~~~~~~~~~~~~~~~~~l~ 159 (270)
T 3aam_A 88 ASLADDLEKAALLGVEYVVVHPGSG------RP--ERVKEGALKALRLAGVRSRPVLLVENTAGGGEKVGARFEELAWLV 159 (270)
T ss_dssp HHHHHHHHHHHHHTCCEEEECCCBS------CH--HHHHHHHHHHHHHHTCCSSSEEEEECCCCCTTBSCCSHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCC------CH--HHHHHHHHHHHHhhcccCCCEEEEecCCCCCCccCCCHHHHHHHH
Confidence 34555566777777766654 3433 10 334444444443321023578999998644444344788877665
Q ss_pred HH
Q 024925 235 AA 236 (260)
Q Consensus 235 ~~ 236 (260)
+.
T Consensus 160 ~~ 161 (270)
T 3aam_A 160 AD 161 (270)
T ss_dssp TT
T ss_pred Hh
Confidence 43
No 107
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=29.07 E-value=98 Score=27.17 Aligned_cols=47 Identities=17% Similarity=0.375 Sum_probs=32.6
Q ss_pred HHHHHHHHHhcCCCCCceEEEEccccc-------------ccCCCCCCHHHHHHHHHHHHHH
Q 024925 192 CFQQLKAYADAIPSWDNVVIAYEPVWA-------------IGTGKVATPEQAQEVHAALRDW 240 (260)
Q Consensus 192 l~~Ql~~~l~~i~~~~~iiIAYEPvWA-------------IGTG~~aspe~iqe~~~~IR~~ 240 (260)
+..+++..+..++ .+-+|.|+|.|. .|.|..++|.+++++.+.||+.
T Consensus 177 Ld~~~~~~l~~~~--~~~~v~~H~af~Yf~~~yGl~~~~~~~~~~eps~~~l~~l~~~ik~~ 236 (291)
T 1pq4_A 177 LNQELGQILQPLP--QRKFIVFHPSWAYFARDYNLVQIPIEVEGQEPSAQELKQLIDTAKEN 236 (291)
T ss_dssp HHHHHHHHHTTCS--CCEEEESSCCCHHHHHHTTCEEEESCBTTBCCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCC--CCEEEEECCchHHHHHHCCCEEeecccCCCCCCHHHHHHHHHHHHHc
Confidence 4444555555543 345778888763 3557789999999999999863
No 108
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=28.87 E-value=24 Score=29.34 Aligned_cols=19 Identities=11% Similarity=-0.057 Sum_probs=11.0
Q ss_pred HHHHHHHHHHHCCCeEEEE
Q 024925 157 FIGKKAAYALSEGLGVIAC 175 (260)
Q Consensus 157 ~I~~Kv~~Al~~gL~pIlC 175 (260)
.+.+-+..|.+.|...|++
T Consensus 84 ~~~~~i~~a~~lG~~~v~~ 102 (275)
T 3qc0_A 84 DNRRAVDEAAELGADCLVL 102 (275)
T ss_dssp HHHHHHHHHHHTTCSCEEE
T ss_pred HHHHHHHHHHHhCCCEEEE
Confidence 3445556666666665544
No 109
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=27.98 E-value=66 Score=26.84 Aligned_cols=16 Identities=6% Similarity=0.208 Sum_probs=8.5
Q ss_pred cHHHHHHHcC-CCceEe
Q 024925 96 YIDQVKNSLT-DRIEIA 111 (260)
Q Consensus 96 ~L~~v~~~~~-~~i~vg 111 (260)
.+..+++.+. ..+.+.
T Consensus 52 ~~~~~~~~l~~~gl~i~ 68 (264)
T 1yx1_A 52 DTEALTAAIQLQGLECV 68 (264)
T ss_dssp CHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHcCCEEE
Confidence 5566655554 455543
No 110
>3i4s_A Histidine triad protein; hydrolase, phosphatase, HIT superfamily, PSI-2, NYSGXRC, STR genomics, protein structure initiative; 1.75A {Bradyrhizobium japonicum}
Probab=27.63 E-value=55 Score=26.31 Aligned_cols=29 Identities=24% Similarity=0.375 Sum_probs=24.5
Q ss_pred cccccccCCCCCCHHHHHHHHHHHHHHHH
Q 024925 214 EPVWAIGTGKVATPEQAQEVHAALRDWLK 242 (260)
Q Consensus 214 EPvWAIGTG~~aspe~iqe~~~~IR~~l~ 242 (260)
.|+|.-+.....++++.+++.+.||+.|.
T Consensus 111 ~pvw~~~~~~~~~~eel~~~a~~Ir~~L~ 139 (149)
T 3i4s_A 111 RPVWGVMQPLAHDATEVQNFISALRRKIW 139 (149)
T ss_dssp SCCTTTSCCCCCCHHHHHHHHHHHHHHHC
T ss_pred ccccCCCcCCCCCHHHHHHHHHHHHHHHh
Confidence 57887777678899999999999999874
No 111
>1jfx_A 1,4-beta-N-acetylmuramidase M1; beta-alpha-barrel, cellosyl, lysozyme, hydrolase; 1.65A {Streptomyces coelicolor} SCOP: c.1.8.8
Probab=27.61 E-value=65 Score=26.96 Aligned_cols=110 Identities=14% Similarity=0.045 Sum_probs=65.7
Q ss_pred ccccccCHHHHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEE----EEeCCcHHHHhcCChHHHHHHHHH
Q 024925 122 AFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI----ACIGEQLQEREAGKTFDVCFQQLK 197 (260)
Q Consensus 122 A~TGEISa~mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pI----lCIGE~leere~g~~~~vl~~Ql~ 197 (260)
.|.|+|....|+..|+++|||==+|=..+. |.....-++.|.++||.+= .|-+... -.+|.+
T Consensus 12 ~~qg~idw~~v~~~gi~FviiKateG~~~~---D~~f~~n~~~A~~aGl~vG~Yhf~~~~~~~-----------a~~qA~ 77 (217)
T 1jfx_A 12 HWQGSINWSSVKSAGMSFAYIKATEGTNYK---DDRFSANYTNAYNAGIIRGAYHFARPNASS-----------GTAQAD 77 (217)
T ss_dssp GGGCSCCHHHHHHTTCCEEEEEEEETTTEE---CTTHHHHHHHHHHTTCEEEEEEECCTTTSC-----------HHHHHH
T ss_pred CCCCCCCHHHHHhCCCCEEEEEEecCCCcc---ChHHHHHHHHHHHCCCeEEEEEEeeCCCCC-----------HHHHHH
Confidence 467899999999999999999766654433 4456667799999999642 2332111 135666
Q ss_pred HHHhcC---C-CCC--ceEEEEccc-ccccCCCCCCHHHHHHHHHHHHHHHHhhcC
Q 024925 198 AYADAI---P-SWD--NVVIAYEPV-WAIGTGKVATPEQAQEVHAALRDWLKNMSQ 246 (260)
Q Consensus 198 ~~l~~i---~-~~~--~iiIAYEPv-WAIGTG~~aspe~iqe~~~~IR~~l~~~~~ 246 (260)
-+++.+ + ... .+++-+|.. |.- +....++++..+.+...-+.+.+.+|
T Consensus 78 ~f~~~~~~~~~~~~~lp~~lD~E~~~~~~-~~~~~~~~~~~~~~~~f~~~v~~~~G 132 (217)
T 1jfx_A 78 YFASNGGGWSRDNRTLPGVLDIEHNPSGA-MCYGLSTTQMRTWINDFHARYKARTT 132 (217)
T ss_dssp HHHHTTCCCCCSSSBCCCEEECCSCSSSC-TTTTCCHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHhhccCCCCCCcCeEEEeecCCCCc-ccCCCCHHHHHHHHHHHHHHHHHHHC
Confidence 666666 2 111 256778852 211 11124566655444444455555455
No 112
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=27.56 E-value=51 Score=28.61 Aligned_cols=60 Identities=13% Similarity=0.106 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCChHHHHHHHHHHHHhcCCCCCceEEEEcccc
Q 024925 155 DQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVW 217 (260)
Q Consensus 155 d~~I~~Kv~~Al~~gL~pIlCIGE~leere~g~~~~vl~~Ql~~~l~~i~~~~~iiIAYEPvW 217 (260)
.+.+.+-+..|.+.|...|+|-|-.....+ ...+.+.+.|+.+.+.. ....|.|+|||..
T Consensus 113 ~~~~~~~i~~A~~lG~~~v~~~~~~~~~~~--~~~~~~~~~l~~l~~~a-~~~Gv~l~lEn~~ 172 (305)
T 3obe_A 113 DEFWKKATDIHAELGVSCMVQPSLPRIENE--DDAKVVSEIFNRAGEIT-KKAGILWGYHNHS 172 (305)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCCCCCSSH--HHHHHHHHHHHHHHHHH-HTTTCEEEEECCS
T ss_pred HHHHHHHHHHHHHcCCCEEEeCCCCCCCCH--HHHHHHHHHHHHHHHHH-HHcCCEEEEecCc
Confidence 345777778899999999988653211000 01223333444333321 1235789999975
No 113
>2wag_A Lysozyme, putative; hydrolase, GH25, lysin; 1.40A {Bacillus anthracis}
Probab=27.55 E-value=2.7e+02 Score=23.31 Aligned_cols=108 Identities=15% Similarity=0.223 Sum_probs=66.5
Q ss_pred ccccccCHHHHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEE---E-EeCCcHHHHhcCChHHHHHHHHH
Q 024925 122 AFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI---A-CIGEQLQEREAGKTFDVCFQQLK 197 (260)
Q Consensus 122 A~TGEISa~mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pI---l-CIGE~leere~g~~~~vl~~Ql~ 197 (260)
.|.|+|....||..|+++|+|==+|=..+. |..-..-++.|.++||.+= + |-..+ -.+|.+
T Consensus 23 ~~Qg~idw~~vk~~gi~FviiKateG~~~~---D~~f~~n~~~A~~aGl~vG~Yhf~~~~s~------------a~~qA~ 87 (220)
T 2wag_A 23 SYQGDIDWRELEKQNMKFAFIKATEGSAFV---DKYFSKNWTNANKTSMRVGAYHFFSFDSK------------GETQAE 87 (220)
T ss_dssp GGGCSCCHHHHHTTTCCEEEEEEEETTTEE---CTTHHHHHHHHHTSSSEEEEEEECCTTSC------------HHHHHH
T ss_pred CCCCCCCHHHHHHCCCCEEEEEEecCCCcc---ChHHHHHHHHHHHCCCeEEEEEEecCCCh------------HHHHHH
Confidence 467899999999999999999766655443 4456677799999999642 1 22211 134555
Q ss_pred HHHhcCCCC---CceEEEEcccccccC--CCCCCHHHHHHHHHHHHHHHHhhcCC
Q 024925 198 AYADAIPSW---DNVVIAYEPVWAIGT--GKVATPEQAQEVHAALRDWLKNMSQQ 247 (260)
Q Consensus 198 ~~l~~i~~~---~~iiIAYEPvWAIGT--G~~aspe~iqe~~~~IR~~l~~~~~~ 247 (260)
-+++.++.. -.+++-+|.. |. ....+++++.+.+...-+.+.+.+|.
T Consensus 88 ~f~~~~~~~~~~lp~~lDvE~~---~~~~~~~~s~~~~~~~~~~f~~~v~~~~G~ 139 (220)
T 2wag_A 88 QFIRNVPKYKQALPPVIDVEFY---ANKKDNPPKREDVTKELSVMIEMLEKHYGK 139 (220)
T ss_dssp HHHHHSCCCTTSCCCEEEECCC---TTGGGSCCCHHHHHHHHHHHHHHHHHHHCS
T ss_pred HHHHhccccCCCCceEEEEecc---CCcccCCCCHHHHHHHHHHHHHHHHHHHCC
Confidence 666655421 2357778851 11 01256666555444444566655553
No 114
>3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A*
Probab=27.03 E-value=2.4e+02 Score=26.47 Aligned_cols=22 Identities=23% Similarity=0.045 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHCCCeEEEEeC
Q 024925 156 QFIGKKAAYALSEGLGVIACIG 177 (260)
Q Consensus 156 ~~I~~Kv~~Al~~gL~pIlCIG 177 (260)
+.+.+=+..|.++||.+|+++=
T Consensus 134 ~~ld~vV~~a~~~Gi~VIldlH 155 (458)
T 3qho_A 134 QIMEKIIKKAGDLGIFVLLDYH 155 (458)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEecc
Confidence 3455556889999999999874
No 115
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=26.48 E-value=3.8e+02 Score=24.67 Aligned_cols=105 Identities=20% Similarity=0.322 Sum_probs=62.6
Q ss_pred CHHHHHhcCCCEEEee----eccccccc--CCCHHHHHHHHHHHHHCCCe-E----EEEe-CCcHHHHhcCChHHHHHHH
Q 024925 128 SVEQLKDIGCKWVVLG----HSERRHVI--GEDDQFIGKKAAYALSEGLG-V----IACI-GEQLQEREAGKTFDVCFQQ 195 (260)
Q Consensus 128 Sa~mLkd~G~~~viIG----HSERR~~f--~Etd~~I~~Kv~~Al~~gL~-p----IlCI-GE~leere~g~~~~vl~~Q 195 (260)
-.+.|+++|++.+-+| +.+-.+.+ +-+-+.+.+-++.+.+.|+. + |+-+ ||+.+ .+.+-
T Consensus 155 ~l~~L~~~G~~rislGvQS~~~~~l~~i~R~~~~~~~~~ai~~~r~~G~~~v~~dlI~GlPget~e---------~~~~t 225 (457)
T 1olt_A 155 VLDHLRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPE---------SFAFT 225 (457)
T ss_dssp HHHHHHHTTCCEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTTCCSCEEEEEESCTTCCHH---------HHHHH
T ss_pred HHHHHHHcCCCEEEEeeccCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCCcEEEEEEcCCCCCCHH---------HHHHH
Confidence 3578899999999998 33322211 23567788888999999986 2 2222 56554 33344
Q ss_pred HHHHHhcCCCCCceE-EEE--cccc-----cccCCCCCCHHHHHHHHHHHHHHHHh
Q 024925 196 LKAYADAIPSWDNVV-IAY--EPVW-----AIGTGKVATPEQAQEVHAALRDWLKN 243 (260)
Q Consensus 196 l~~~l~~i~~~~~ii-IAY--EPvW-----AIGTG~~aspe~iqe~~~~IR~~l~~ 243 (260)
++.+.+.-+ +.+. ..| +|-. .++....+++++..++...+.+.|.+
T Consensus 226 l~~~~~l~~--~~i~~y~l~~~p~t~~~~~~~~~~~lp~~~~~~~~~~~~~~~L~~ 279 (457)
T 1olt_A 226 LKRVAELNP--DRLSVFNYAHLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQ 279 (457)
T ss_dssp HHHHHHHCC--SEEEEEECCCCTTTSGGGGGSCGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCc--CEEEeecCcCCcCchhHhhccccCCCcCHHHHHHHHHHHHHHHHH
Confidence 444333212 2222 122 3421 23444567888888888888888876
No 116
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A*
Probab=26.32 E-value=52 Score=32.68 Aligned_cols=48 Identities=6% Similarity=-0.015 Sum_probs=34.0
Q ss_pred CHHHHHhcCCCEEEeee-ccccc-----ccCCCHHHHHHHHHHHHHCCCeEEEEeC
Q 024925 128 SVEQLKDIGCKWVVLGH-SERRH-----VIGEDDQFIGKKAAYALSEGLGVIACIG 177 (260)
Q Consensus 128 Sa~mLkd~G~~~viIGH-SERR~-----~f~Etd~~I~~Kv~~Al~~gL~pIlCIG 177 (260)
-.+++|++|++.|-+++ +=.|. .|+ =+.+..=++.|.++||.+|++++
T Consensus 28 Dl~~mk~~G~n~vr~~if~W~~~eP~~g~~~--f~~ld~~i~~~~~~Gi~vil~~~ 81 (675)
T 3tty_A 28 DMRMFNLAGIDVATVNVFSWAKIQRDEVSYD--FTWLDDIIERLTKENIYLCLATS 81 (675)
T ss_dssp HHHHHHHHTCCEEEECSSCHHHHBSSSSCBC--CHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHcCCCEEEEeeechhhhCCcCCccC--HHHHHHHHHHHHHCCCEEEEeCC
Confidence 34678999999999987 31111 121 13455556899999999999986
No 117
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=25.85 E-value=1.2e+02 Score=26.17 Aligned_cols=25 Identities=20% Similarity=0.388 Sum_probs=17.9
Q ss_pred ccCCCCCCHHHHHHHHHHHHHHHHh
Q 024925 219 IGTGKVATPEQAQEVHAALRDWLKN 243 (260)
Q Consensus 219 IGTG~~aspe~iqe~~~~IR~~l~~ 243 (260)
||++...+|+.++++.+.++.++..
T Consensus 269 vg~~~l~~p~~~~~i~~~l~~~~~~ 293 (311)
T 1ep3_A 269 VGTANFADPFVCPKIIDKLPELMDQ 293 (311)
T ss_dssp ECTHHHHCTTHHHHHHHHHHHHHHH
T ss_pred ECHHHHcCcHHHHHHHHHHHHHHHH
Confidence 4554445678888888888888754
No 118
>1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A*
Probab=25.80 E-value=50 Score=32.30 Aligned_cols=46 Identities=20% Similarity=0.311 Sum_probs=32.8
Q ss_pred HHHHHhcCCCEEEeee-c----cc-ccccCCCHHHHHHHHHHHHHCCCeEEEEe
Q 024925 129 VEQLKDIGCKWVVLGH-S----ER-RHVIGEDDQFIGKKAAYALSEGLGVIACI 176 (260)
Q Consensus 129 a~mLkd~G~~~viIGH-S----ER-R~~f~Etd~~I~~Kv~~Al~~gL~pIlCI 176 (260)
.++||++|++.|-+++ + |- .-.|+. +.+..=+..|.++||.+|++.
T Consensus 20 l~~mk~~G~N~vR~~if~W~~~eP~~g~~d~--~~ld~~ld~a~~~Gi~vil~~ 71 (645)
T 1kwg_A 20 ARRMREAGLSHVRIGEFAWALLEPEPGRLEW--GWLDEAIATLAAEGLKVVLGT 71 (645)
T ss_dssp HHHHHHHTCCEEEECTTCHHHHCSBTTBCCC--HHHHHHHHHHHTTTCEEEEEC
T ss_pred HHHHHHcCCCEEEEeeechhhcCCCCCccCh--HHHHHHHHHHHHCCCEEEEeC
Confidence 5689999999999997 2 11 111221 234555689999999999998
No 119
>2g0t_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.67A {Thermotoga maritima} SCOP: c.37.1.10
Probab=25.08 E-value=1.2e+02 Score=27.78 Aligned_cols=48 Identities=29% Similarity=0.361 Sum_probs=34.6
Q ss_pred CHHHHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 024925 128 SVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 178 (260)
Q Consensus 128 Sa~mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pIlCIGE 178 (260)
+.+.+.+.+++.+++|-+-.=-. -.+....++..|+++|+.+|--.-+
T Consensus 81 d~~~al~~~~d~lvig~a~~gg~---l~~~~~~~I~~Al~~G~nVvsglh~ 128 (350)
T 2g0t_A 81 SVEKAKEMGAEVLIIGVSNPGGY---LEEQIATLVKKALSLGMDVISGLHF 128 (350)
T ss_dssp SHHHHHHTTCCEEEECCCSCCHH---HHHHHHHHHHHHHHTTCEEEECCCC
T ss_pred CHHHHHhcCCCEEEEEecCCCCC---CCHHHHHHHHHHHHcCCcEEeCChh
Confidence 66777788999999997543222 2345778899999999997754433
No 120
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus}
Probab=25.06 E-value=1.5e+02 Score=26.77 Aligned_cols=52 Identities=8% Similarity=0.093 Sum_probs=37.5
Q ss_pred CHHHHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCc
Q 024925 128 SVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQ 179 (260)
Q Consensus 128 Sa~mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pIlCIGE~ 179 (260)
..+.|++.|++.|=+-|++.-.+-.+.-+.+.+=++.|.++||.+|+.+-..
T Consensus 59 ~i~~lk~~G~N~VRip~~~~~~~~~~~l~~ld~~v~~a~~~GiyVIlDlH~~ 110 (345)
T 3jug_A 59 AIPAIAEQGANTIRIVLSDGGQWEKDDIDTVREVIELAEQNKMVAVVEVHDA 110 (345)
T ss_dssp HHHHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHTTTCEEEEEECTT
T ss_pred HHHHHHHcCCCEEEEEecCCCccCHHHHHHHHHHHHHHHHCCCEEEEEeccC
Confidence 5667888999988888775322222334456666799999999999988654
No 121
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=25.04 E-value=1.2e+02 Score=26.47 Aligned_cols=57 Identities=18% Similarity=0.232 Sum_probs=38.3
Q ss_pred CceEeeeccccCCCcccccccCHHHHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEEEEeC
Q 024925 107 RIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIG 177 (260)
Q Consensus 107 ~i~vgAQnv~~~~~GA~TGEISa~mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pIlCIG 177 (260)
++.+-+-= -..+++.| .+++.++|++++.+ |.|-- +.+.+-++.+.+.|+.+.+-+.
T Consensus 86 ~~~ldvHL-mv~~p~~~-----i~~~~~aGAd~itv-H~Ea~-------~~~~~~i~~ir~~G~k~Gvaln 142 (246)
T 3inp_A 86 TAGMDVHL-MVKPVDAL-----IESFAKAGATSIVF-HPEAS-------EHIDRSLQLIKSFGIQAGLALN 142 (246)
T ss_dssp CSCEEEEE-ECSSCHHH-----HHHHHHHTCSEEEE-CGGGC-------SCHHHHHHHHHTTTSEEEEEEC
T ss_pred CCeEEEEE-eeCCHHHH-----HHHHHHcCCCEEEE-ccccc-------hhHHHHHHHHHHcCCeEEEEec
Confidence 44443322 24455554 68899999999998 45532 2345556778899999988886
No 122
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=24.95 E-value=3.3e+02 Score=23.45 Aligned_cols=158 Identities=13% Similarity=0.137 Sum_probs=85.2
Q ss_pred cCHHHHHHHHHHHhhccccCCceEEEc--CCc----ccHHHHHHHcC--CCceEeeeccccCCCcccccccCHHHHHhcC
Q 024925 65 GTKESITKLVSDLNDAKLEADVDVVVA--PPF----VYIDQVKNSLT--DRIEIAAQNSWVGKGGAFTGEISVEQLKDIG 136 (260)
Q Consensus 65 ~t~~~~~~l~~~l~~~~~~~~v~Vvva--Pp~----~~L~~v~~~~~--~~i~vgAQnv~~~~~GA~TGEISa~mLkd~G 136 (260)
.+.++..++++.+.+.-. .-+++..+ |.+ -....+.+.+. +++.+.+-- +..-..+.+.+.|
T Consensus 23 ~~~e~k~~i~~~L~~~Gv-~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~~~~~v~~l~---------~n~~~i~~a~~~G 92 (295)
T 1ydn_A 23 VPTADKIALINRLSDCGY-ARIEATSFVSPKWVPQLADSREVMAGIRRADGVRYSVLV---------PNMKGYEAAAAAH 92 (295)
T ss_dssp CCHHHHHHHHHHHTTTTC-SEEEEEECSCTTTCGGGTTHHHHHHHSCCCSSSEEEEEC---------SSHHHHHHHHHTT
T ss_pred cCHHHHHHHHHHHHHcCc-CEEEEccCcCccccccccCHHHHHHHHHhCCCCEEEEEe---------CCHHHHHHHHHCC
Confidence 566788888888765321 12444332 221 12334444333 234443211 1133457788899
Q ss_pred CCEEEee------eccc--ccccCCCHHHHHHHHHHHHHCCCeEEEEeCCcHH-HHhcCChHHHHHHHHHHHHhcCCCCC
Q 024925 137 CKWVVLG------HSER--RHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQ-EREAGKTFDVCFQQLKAYADAIPSWD 207 (260)
Q Consensus 137 ~~~viIG------HSER--R~~f~Etd~~I~~Kv~~Al~~gL~pIlCIGE~le-ere~g~~~~vl~~Ql~~~l~~i~~~~ 207 (260)
++.|-+- |.++ ++-+.|+-+.+..=+++|.+.|+.+-..++-+.- +.+.-.+.+.+.+-++.+.+. ..+
T Consensus 93 ~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~--G~d 170 (295)
T 1ydn_A 93 ADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFSL--GCH 170 (295)
T ss_dssp CSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHHHHHHHHHHHH--TCS
T ss_pred CCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhc--CCC
Confidence 9988876 2232 2233444445555579999999998644432210 001123455555555544332 123
Q ss_pred ceEEEEcccccccCCCCCCHHHHHHHHHHHHHHH
Q 024925 208 NVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWL 241 (260)
Q Consensus 208 ~iiIAYEPvWAIGTG~~aspe~iqe~~~~IR~~l 241 (260)
.+.|+ -.+|. ++|+++.+..+.||+.+
T Consensus 171 ~i~l~----Dt~G~---~~P~~~~~lv~~l~~~~ 197 (295)
T 1ydn_A 171 EVSLG----DTIGR---GTPDTVAAMLDAVLAIA 197 (295)
T ss_dssp EEEEE----ETTSC---CCHHHHHHHHHHHHTTS
T ss_pred EEEec----CCCCC---cCHHHHHHHHHHHHHhC
Confidence 45555 24554 68999999999888764
No 123
>2yx6_A Hypothetical protein PH0822; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=24.87 E-value=60 Score=24.45 Aligned_cols=42 Identities=24% Similarity=0.226 Sum_probs=29.5
Q ss_pred cCHHHHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCcH
Q 024925 127 ISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQL 180 (260)
Q Consensus 127 ISa~mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pIlCIGE~l 180 (260)
-.++.|++.||+.||.|.= ++.-. ....+.|+.++.+.+.+.
T Consensus 54 ~~~~~L~~~gv~~vi~~~i------G~~a~------~~L~~~GI~v~~~~~~~v 95 (121)
T 2yx6_A 54 DLPNFIKDHGAKIVLTYGI------GRRAI------EYFNSLGISVVTGVYGRI 95 (121)
T ss_dssp HHHHHHHHTTCCEEECSBC------CHHHH------HHHHHTTCEEECSBCSBH
T ss_pred HHHHHHHHcCCCEEEECCC------CHhHH------HHHHHCCCEEEECCCCCH
Confidence 6788999999999999952 32111 335578999997654443
No 124
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=24.59 E-value=2.9e+02 Score=22.60 Aligned_cols=85 Identities=8% Similarity=-0.019 Sum_probs=0.0
Q ss_pred HHHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCChHHHHHHHHHHHHhcCCCCCce
Q 024925 130 EQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNV 209 (260)
Q Consensus 130 ~mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pIlCIGE~leere~g~~~~vl~~Ql~~~l~~i~~~~~i 209 (260)
+.|++.|++.+.++-.-. ++.+.+.+-++.|.+.|...|+|--. ....+++...++. ..|
T Consensus 68 ~~l~~~gl~i~~~~~~~~-----~~~~~~~~~i~~A~~lGa~~v~~~p~-----------~~~l~~l~~~a~~----~gv 127 (257)
T 3lmz_A 68 DKCAAHKVTGYAVGPIYM-----KSEEEIDRAFDYAKRVGVKLIVGVPN-----------YELLPYVDKKVKE----YDF 127 (257)
T ss_dssp HHHHHTTCEEEEEEEEEE-----CSHHHHHHHHHHHHHHTCSEEEEEEC-----------GGGHHHHHHHHHH----HTC
T ss_pred HHHHHcCCeEEEEecccc-----CCHHHHHHHHHHHHHhCCCEEEecCC-----------HHHHHHHHHHHHH----cCC
Q ss_pred EEEEcccccccCCCCCCHHHHHHHHH
Q 024925 210 VIAYEPVWAIGTGKVATPEQAQEVHA 235 (260)
Q Consensus 210 iIAYEPvWAIGTG~~aspe~iqe~~~ 235 (260)
.|+|||.+ -......+++++.++.+
T Consensus 128 ~l~lEn~~-~~~~~~~~~~~~~~ll~ 152 (257)
T 3lmz_A 128 HYAIHLHG-PDIKTYPDATDVWVHTK 152 (257)
T ss_dssp EEEEECCC-TTCSSSCSHHHHHHHHT
T ss_pred EEEEecCC-CcccccCCHHHHHHHHH
No 125
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=24.52 E-value=3.5e+02 Score=23.60 Aligned_cols=159 Identities=16% Similarity=0.076 Sum_probs=88.5
Q ss_pred ccCHHHHHHHHHHHhhccccCCceEEEc--C----CcccHHHHHHHcC--CCceEeeeccccCCCcccccccCHHHHHhc
Q 024925 64 NGTKESITKLVSDLNDAKLEADVDVVVA--P----PFVYIDQVKNSLT--DRIEIAAQNSWVGKGGAFTGEISVEQLKDI 135 (260)
Q Consensus 64 n~t~~~~~~l~~~l~~~~~~~~v~Vvva--P----p~~~L~~v~~~~~--~~i~vgAQnv~~~~~GA~TGEISa~mLkd~ 135 (260)
..+.++..++++.|.+.-. ..+++..+ | .+.....+...+. .+..+.+-- . -.--.+...+.
T Consensus 26 ~~~~e~k~~i~~~L~~~Gv-~~IE~g~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~--~-------~~~~i~~a~~a 95 (302)
T 2ftp_A 26 PIEVADKIRLVDDLSAAGL-DYIEVGSFVSPKWVPQMAGSAEVFAGIRQRPGVTYAALA--P-------NLKGFEAALES 95 (302)
T ss_dssp CCCHHHHHHHHHHHHHTTC-SEEEEEECSCTTTCGGGTTHHHHHHHSCCCTTSEEEEEC--C-------SHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHcCc-CEEEECCCcCccccccccCHHHHHHHhhhcCCCEEEEEe--C-------CHHHHHHHHhC
Confidence 3566777888887766422 22454432 2 2233334434332 333333211 0 01234567788
Q ss_pred CCCEEEe-eec-cc------ccccCCCHHHHHHHHHHHHHCCCeEEEEeCCcHH-HHhcCChHHHHHHHHHHHHhcCCCC
Q 024925 136 GCKWVVL-GHS-ER------RHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQ-EREAGKTFDVCFQQLKAYADAIPSW 206 (260)
Q Consensus 136 G~~~viI-GHS-ER------R~~f~Etd~~I~~Kv~~Al~~gL~pIlCIGE~le-ere~g~~~~vl~~Ql~~~l~~i~~~ 206 (260)
|++.|-+ ..+ |- ++-+.|+-+.+..=+++|.+.|+.+-.+++-..- +.+.-...+.+.+-++.+.+. ..
T Consensus 96 G~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~--G~ 173 (302)
T 2ftp_A 96 GVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDPRQVAWVARELQQM--GC 173 (302)
T ss_dssp TCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHT--TC
T ss_pred CcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHc--CC
Confidence 9999886 555 42 1334555566666779999999998655543210 011123456666666654443 22
Q ss_pred CceEEEEcccccccCCCCCCHHHHHHHHHHHHHHH
Q 024925 207 DNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWL 241 (260)
Q Consensus 207 ~~iiIAYEPvWAIGTG~~aspe~iqe~~~~IR~~l 241 (260)
+.|.|+ -.+|. ++|+++.+..+.||+.+
T Consensus 174 d~i~l~----DT~G~---~~P~~~~~lv~~l~~~~ 201 (302)
T 2ftp_A 174 YEVSLG----DTIGV---GTAGATRRLIEAVASEV 201 (302)
T ss_dssp SEEEEE----ESSSC---CCHHHHHHHHHHHTTTS
T ss_pred CEEEEe----CCCCC---cCHHHHHHHHHHHHHhC
Confidence 345555 45665 68999999999888754
No 126
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=24.27 E-value=3.1e+02 Score=22.77 Aligned_cols=14 Identities=7% Similarity=-0.033 Sum_probs=8.2
Q ss_pred HHhcCCCEEEeeec
Q 024925 132 LKDIGCKWVVLGHS 145 (260)
Q Consensus 132 Lkd~G~~~viIGHS 145 (260)
.++.|++..+=.|.
T Consensus 155 a~~~Gv~l~lE~~~ 168 (287)
T 3kws_A 155 AAQHGTSVIFEPLN 168 (287)
T ss_dssp HHHTTCCEEECCCC
T ss_pred HHHcCCEEEEEecC
Confidence 44556666666554
No 127
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=23.97 E-value=1.9e+02 Score=26.05 Aligned_cols=80 Identities=14% Similarity=0.190 Sum_probs=48.7
Q ss_pred CCceEEEcCCcccHHHHHHHcC--CCceEeeeccccCCCcccccccCHHHHHhcCCCEEEeeecccccccCCCHHHHHHH
Q 024925 84 ADVDVVVAPPFVYIDQVKNSLT--DRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKK 161 (260)
Q Consensus 84 ~~v~VvvaPp~~~L~~v~~~~~--~~i~vgAQnv~~~~~GA~TGEISa~mLkd~G~~~viIGHSERR~~f~Etd~~I~~K 161 (260)
.+.|.++.|.......+..... ....+-+ |+- ..| -|..+|.+.|+++|++.|+.|.+--|..+.- +..-
T Consensus 182 AGAD~ifi~g~~~~~ei~~~~~~~~~~Pl~~-n~~--~~g-~~p~~~~~eL~~lGv~~v~~~~~~~raa~~A----~~~~ 253 (302)
T 3fa4_A 182 AGADVGFLEGITSREMARQVIQDLAGWPLLL-NMV--EHG-ATPSISAAEAKEMGFRIIIFPFAALGPAVAA----MREA 253 (302)
T ss_dssp TTCSEEEETTCCCHHHHHHHHHHTTTSCEEE-ECC--TTS-SSCCCCHHHHHHHTCSEEEETTTTHHHHHHH----HHHH
T ss_pred cCCCEEeecCCCCHHHHHHHHHHhcCCceeE-EEe--cCC-CCCCCCHHHHHHcCCCEEEEchHHHHHHHHH----HHHH
Confidence 4678777776666555544322 1222211 332 223 3567899999999999999999998865422 3333
Q ss_pred HHHHHHCCCe
Q 024925 162 AAYALSEGLG 171 (260)
Q Consensus 162 v~~Al~~gL~ 171 (260)
.+..++.|-.
T Consensus 254 ~~~i~~~g~~ 263 (302)
T 3fa4_A 254 MEKLKRDGIP 263 (302)
T ss_dssp HHHHHHHSSC
T ss_pred HHHHHHcCCC
Confidence 4445556643
No 128
>2x8r_A Glycosyl hydrolase; peptidoglycan cleavage, endo-N-acetylmuramidases, motif; 1.70A {Aspergillus fumigatus}
Probab=23.58 E-value=57 Score=27.24 Aligned_cols=110 Identities=14% Similarity=0.030 Sum_probs=65.1
Q ss_pred ccccccCHHHHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEE----EEeCCcHHHHhcCChHHHHHHHHH
Q 024925 122 AFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI----ACIGEQLQEREAGKTFDVCFQQLK 197 (260)
Q Consensus 122 A~TGEISa~mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pI----lCIGE~leere~g~~~~vl~~Ql~ 197 (260)
.|.|+|....|+..|+++|||==+|=..+. |.....-++.|.++||.+= .|-+.+ + -.+|.+
T Consensus 11 ~~qg~idw~~v~~~gi~FviiKateG~~~~---D~~f~~n~~~A~~aGl~vG~Yhf~~~~~~-~----------a~~qA~ 76 (210)
T 2x8r_A 11 NHQKSVNFEAAKKDGAQFVMIKATEGTTYK---DTVFNSHYTGATKAGLLRGGYHFARPDKS-T----------GSTQAK 76 (210)
T ss_dssp TTCSCCCHHHHHHTTEEEEEEEEEETTTEE---CTTHHHHHHHHHHTTCEEEEEEECCTTSS-C----------HHHHHH
T ss_pred CCCCCCCHHHHHhCCCcEEEEEEecCCCcc---ChHHHHHHHHHHHCCCeeEEEEEeecCCC-c----------HHHHHH
Confidence 467899999999999999999777754433 4456667799999999641 233322 1 234566
Q ss_pred HHHhcCCC----CC--ceEEEEccc-ccccCCCCCCHHHHHHHHHHHHHHHHhhcC
Q 024925 198 AYADAIPS----WD--NVVIAYEPV-WAIGTGKVATPEQAQEVHAALRDWLKNMSQ 246 (260)
Q Consensus 198 ~~l~~i~~----~~--~iiIAYEPv-WAIGTG~~aspe~iqe~~~~IR~~l~~~~~ 246 (260)
-+++.+.. .. .+++-+|.. |. ++....+++++.+.+...-+.+.+.+|
T Consensus 77 ~f~~~~~~~~~~~~~lp~~lD~E~~~~~-~~~~~~~~~~~~~~~~~f~~~v~~~~G 131 (210)
T 2x8r_A 77 FFLKNGGGWSDDNRTLPGMLDIEYNPYG-ATCYGLSHSQMVAWIHDFVNEYHHATS 131 (210)
T ss_dssp HHHTTTCCCCSSSSBCCCEEECCCCTTS-CGGGGCCHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHhcccCCCCCccceEEeeeccCCc-ccccCCCHHHHHHHHHHHHHHHHHHHC
Confidence 66666531 11 247777752 11 111124555554444444455555444
No 129
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=23.17 E-value=3.1e+02 Score=22.40 Aligned_cols=19 Identities=16% Similarity=0.239 Sum_probs=9.0
Q ss_pred HHHHHHHcC-CCceEeeecc
Q 024925 97 IDQVKNSLT-DRIEIAAQNS 115 (260)
Q Consensus 97 L~~v~~~~~-~~i~vgAQnv 115 (260)
+..+++.+. ..+.+.+=++
T Consensus 65 ~~~~~~~l~~~gl~i~~~~~ 84 (262)
T 3p6l_A 65 QKEIKELAASKGIKIVGTGV 84 (262)
T ss_dssp HHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHcCCeEEEEec
Confidence 344444443 4555554444
No 130
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=23.15 E-value=2.1e+02 Score=24.54 Aligned_cols=118 Identities=14% Similarity=0.105 Sum_probs=66.2
Q ss_pred CCcccHHHHHHHcCCCceEeeeccccCCCcccccccCHHHHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHC---
Q 024925 92 PPFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSE--- 168 (260)
Q Consensus 92 Pp~~~L~~v~~~~~~~i~vgAQnv~~~~~GA~TGEISa~mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~--- 168 (260)
|.+++=..+.+.+...... |++.--.. .+.=.+++.++|++++.+ |-| ....+..-++.+.+.
T Consensus 54 pn~t~G~~~v~~lr~~~~~---DvhLMv~~---p~~~i~~~~~aGAd~itv-H~e-------a~~~~~~~i~~i~~~~~~ 119 (237)
T 3cu2_A 54 SLFTVGAIGIKYFPTHCFK---DVHLMVRN---QLEVAKAVVANGANLVTL-QLE-------QYHDFALTIEWLAKQKTT 119 (237)
T ss_dssp SCBCBCTHHHHTSCTTSEE---EEEEECSC---HHHHHHHHHHTTCSEEEE-ETT-------CTTSHHHHHHHHTTCEEE
T ss_pred cchhhhHHHHHHHhhhCCC---CeEEEEEC---HHHHHHHHHHcCCCEEEE-ecC-------CcccHHHHHHHHHhcccc
Confidence 4444444555555533333 77753211 155688999999999765 433 333355666778888
Q ss_pred ------CCeEEEEeC-CcHHHHhcCChHHHHHHHHHHHHhcCCCCCce-EEEEcccccccCCCCCCHHHHHHHHHHHHHH
Q 024925 169 ------GLGVIACIG-EQLQEREAGKTFDVCFQQLKAYADAIPSWDNV-VIAYEPVWAIGTGKVATPEQAQEVHAALRDW 240 (260)
Q Consensus 169 ------gL~pIlCIG-E~leere~g~~~~vl~~Ql~~~l~~i~~~~~i-iIAYEPvWAIGTG~~aspe~iqe~~~~IR~~ 240 (260)
|+.+.+++. .|..++ ++.+++.+ +-+ +.+.+|.+. |+.. .+..-+-++.+|+.
T Consensus 120 ~~~~~~g~~~gv~l~p~Tp~~~------------l~~~l~~~---D~vlvMsv~pgfg---gq~f-~~~~l~ki~~lr~~ 180 (237)
T 3cu2_A 120 YANQVYPVLIGACLCPETPISE------------LEPYLDQI---DVIQLLTLDPRNG---TKYP-SELILDRVIQVEKR 180 (237)
T ss_dssp ETTEEEECEEEEEECTTSCGGG------------GTTTTTTC---SEEEEESEETTTT---EECC-HHHHHHHHHHHHHH
T ss_pred cccccCCceEEEEEeCCChHHH------------HHHHhhcC---ceeeeeeeccCcC---Ceec-ChhHHHHHHHHHHH
Confidence 999999883 222211 23333332 222 237799654 3343 33444455666776
Q ss_pred HH
Q 024925 241 LK 242 (260)
Q Consensus 241 l~ 242 (260)
+.
T Consensus 181 ~~ 182 (237)
T 3cu2_A 181 LG 182 (237)
T ss_dssp HG
T ss_pred HH
Confidence 64
No 131
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=22.86 E-value=2.1e+02 Score=24.18 Aligned_cols=59 Identities=12% Similarity=0.112 Sum_probs=32.5
Q ss_pred CceEEEcCCcc----cHHHHHHHcC-CCceEeeeccccCCCcccccc-------------cCHHHHHhcCCCEEEeeec
Q 024925 85 DVDVVVAPPFV----YIDQVKNSLT-DRIEIAAQNSWVGKGGAFTGE-------------ISVEQLKDIGCKWVVLGHS 145 (260)
Q Consensus 85 ~v~VvvaPp~~----~L~~v~~~~~-~~i~vgAQnv~~~~~GA~TGE-------------ISa~mLkd~G~~~viIGHS 145 (260)
.+++....++. .+..+.+.+. ..+.+.+ +........+++. -..+..+++|++++. +|.
T Consensus 52 ~vEl~~~~~~~~~~~~~~~l~~~l~~~gl~i~~-~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG~~~v~-~~~ 128 (309)
T 2hk0_A 52 IIEVAAHHINEYSDAELATIRKSAKDNGIILTA-GIGPSKTKNLSSEDAAVRAAGKAFFERTLSNVAKLDIHTIG-GAL 128 (309)
T ss_dssp EEEEEHHHHTTSCHHHHHHHHHHHHHTTCEEEE-ECCCCSSSCSSCSCHHHHHHHHHHHHHHHHHHHHTTCCEEE-ECT
T ss_pred EEEeccCCccccchhhHHHHHHHHHHcCCeEEE-ecCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEE-eec
Confidence 46776543332 3555655555 6787777 4332111223321 233456789999987 664
No 132
>3q6z_A Poly [ADP-ribose] polymerase 14; structural genomics consortium, SGC, ADP-ribose binding, TRA; HET: APR; 2.23A {Homo sapiens}
Probab=22.72 E-value=63 Score=27.65 Aligned_cols=32 Identities=22% Similarity=0.323 Sum_probs=22.7
Q ss_pred EEEEcccccccCCCC--CCHHHHHHHHHHHHHHHHhh
Q 024925 210 VIAYEPVWAIGTGKV--ATPEQAQEVHAALRDWLKNM 244 (260)
Q Consensus 210 iIAYEPvWAIGTG~~--aspe~iqe~~~~IR~~l~~~ 244 (260)
-||+ | +||||.- +..+-++-+.+.||+++.+.
T Consensus 150 SIAf-P--~IstG~~g~P~~~aA~i~~~av~~fl~~~ 183 (214)
T 3q6z_A 150 SIAI-P--AISSGVFGFPLGRCVETIVSAIKENFQFK 183 (214)
T ss_dssp EEEE-C--CTTSSTTCCCHHHHHHHHHHHHHHHTSSC
T ss_pred EEEE-C--cccCCCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 4677 8 9999984 43444466788899988653
No 133
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=22.55 E-value=1.4e+02 Score=24.05 Aligned_cols=92 Identities=23% Similarity=0.289 Sum_probs=52.4
Q ss_pred cCHHHHHHHHHHHhhccccCCc-eEEEcCCc------ccHHHHHHHcCCCceEeeeccccCCCcccccccCHHHHHhcCC
Q 024925 65 GTKESITKLVSDLNDAKLEADV-DVVVAPPF------VYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGC 137 (260)
Q Consensus 65 ~t~~~~~~l~~~l~~~~~~~~v-~VvvaPp~------~~L~~v~~~~~~~i~vgAQnv~~~~~GA~TGEISa~mLkd~G~ 137 (260)
.+.++..++++.+.. .-++ ++.. |+ ..+..+++.. +++.|.+ |.-..+.+ +.-.+.++++|+
T Consensus 10 ~~~~~~~~~~~~~~~---~~diie~G~--p~~~~~g~~~i~~ir~~~-~~~~i~~-~~~~~~~~----~~~~~~~~~~Ga 78 (211)
T 3f4w_A 10 LTLPEAMVFMDKVVD---DVDIIEVGT--PFLIREGVNAIKAIKEKY-PHKEVLA-DAKIMDGG----HFESQLLFDAGA 78 (211)
T ss_dssp CCHHHHHHHHHHHGG---GCSEEEECH--HHHHHHTTHHHHHHHHHC-TTSEEEE-EEEECSCH----HHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHhhc---CccEEEeCc--HHHHhccHHHHHHHHHhC-CCCEEEE-EEEeccch----HHHHHHHHhcCC
Confidence 567788888887742 1122 4443 33 2233343332 3455644 33333222 223899999999
Q ss_pred CEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEEE
Q 024925 138 KWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIA 174 (260)
Q Consensus 138 ~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pIl 174 (260)
+++++ |.+- .++.+..=++.+.+.|+.+++
T Consensus 79 d~v~v-~~~~------~~~~~~~~~~~~~~~g~~~~v 108 (211)
T 3f4w_A 79 DYVTV-LGVT------DVLTIQSCIRAAKEAGKQVVV 108 (211)
T ss_dssp SEEEE-ETTS------CHHHHHHHHHHHHHHTCEEEE
T ss_pred CEEEE-eCCC------ChhHHHHHHHHHHHcCCeEEE
Confidence 99999 5552 123344445667778998876
No 134
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=22.44 E-value=2e+02 Score=25.28 Aligned_cols=107 Identities=15% Similarity=0.185 Sum_probs=62.5
Q ss_pred ccccC---HHHHHhcCCCEEEeeec----cccccc--CCCHHHHHHHHHHHHHCCCeE----EEEeCCcHHHHhcCChHH
Q 024925 124 TGEIS---VEQLKDIGCKWVVLGHS----ERRHVI--GEDDQFIGKKAAYALSEGLGV----IACIGEQLQEREAGKTFD 190 (260)
Q Consensus 124 TGEIS---a~mLkd~G~~~viIGHS----ERR~~f--~Etd~~I~~Kv~~Al~~gL~p----IlCIGE~leere~g~~~~ 190 (260)
.|.++ .+.|+++|++.+.+|.- |-++.+ +-+-+.+-+-++.+.+.|+.+ |+-+||+.+++.
T Consensus 147 ~g~~~~e~l~~L~~aG~~~i~i~lEt~~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~e~~~------ 220 (350)
T 3t7v_A 147 PGLMDNATLLKAREKGANFLALYQETYDTELYRKLRVGQSFDGRVNARRFAKQQGYCVEDGILTGVGNDIESTI------ 220 (350)
T ss_dssp CSSCCHHHHHHHHHTTEEEEECCCBCSCHHHHHHHSTTCCHHHHHHHHHHHHHHTCEEEEEEEESSSCCHHHHH------
T ss_pred CCCCCHHHHHHHHHcCCCEEEEeeecCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCeEccceEeecCCCHHHHH------
Confidence 35555 56788999999887752 222211 345666777789999999862 122367776553
Q ss_pred HHHHHHHHHHhcCCCCCceEEEEcccccccCCC----CCCHHHHHHHHHHHHHHHH
Q 024925 191 VCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGK----VATPEQAQEVHAALRDWLK 242 (260)
Q Consensus 191 vl~~Ql~~~l~~i~~~~~iiIAYEPvWAIGTG~----~aspe~iqe~~~~IR~~l~ 242 (260)
+-+.. +..+....--+..|-|. =||.. .+++++...+++..|-.+-
T Consensus 221 ---~~l~~-l~~l~~~~v~~~~f~p~--~gT~l~~~~~~~~~e~l~~ia~~Rl~lp 270 (350)
T 3t7v_A 221 ---LSLRG-MSTNDPDMVRVMTFLPQ--EGTPLEGFRDKSNLSELKIISVLRLMFP 270 (350)
T ss_dssp ---HHHHH-HHHTCCSEEEEEECCCC--TTSTTTTCCCCCCCCHHHHHHHHHHHST
T ss_pred ---HHHHH-HHhCCCCEEEecceeeC--CCCcCccCCCCChHHHHHHHHHHHHhCC
Confidence 22222 22222111123566673 25532 3677888889988887663
No 135
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=22.30 E-value=1.4e+02 Score=25.33 Aligned_cols=81 Identities=20% Similarity=0.198 Sum_probs=42.7
Q ss_pred CceEEEcCCc--ccHHHHHHHcCCCceEeeeccccCCCcccccccCHHHHHhcCCCEEEeeecccccccCCCHHHHHHHH
Q 024925 85 DVDVVVAPPF--VYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKA 162 (260)
Q Consensus 85 ~v~VvvaPp~--~~L~~v~~~~~~~i~vgAQnv~~~~~GA~TGEISa~mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv 162 (260)
+++=+||++. -.+..+++.... +.+-.-.+... | | +++...+.|++|.++| |--+-.++-....+++
T Consensus 128 G~~GvV~sat~~~e~~~ir~~~~~-f~~v~pGI~~~--g---~--~~~~a~~~Gad~iVvG---r~I~~a~dp~~a~~~i 196 (215)
T 3ve9_A 128 NPKGFVAPATRPSMISRVKGDFPD-KLVISPGVGTQ--G---A--KPGIALCHGADYEIVG---RSVYQSADPVRKLEEI 196 (215)
T ss_dssp CCSEEECCTTSHHHHHHHHHHCTT-SEEEECCTTST--T---C--CTTHHHHTTCSEEEEC---HHHHTSSSHHHHHHHH
T ss_pred CCCceeeCCCCHHHHHHHHHhCCC-cEEEcCCCCcC--c---C--CHHHHHHcCCCEEEeC---HHHcCCCCHHHHHHHH
Confidence 4565677652 245556655544 54333333321 1 1 3667779999999998 3233345555566666
Q ss_pred HHHHHCCCeEEEEeCC
Q 024925 163 AYALSEGLGVIACIGE 178 (260)
Q Consensus 163 ~~Al~~gL~pIlCIGE 178 (260)
+..++..+.- |.|.
T Consensus 197 ~~~i~~~~~~--~~~~ 210 (215)
T 3ve9_A 197 VRSQEEVLSS--CEGA 210 (215)
T ss_dssp HHHHHHHC--------
T ss_pred HHHHHHHHHH--hhcc
Confidence 6666655553 5553
No 136
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=22.28 E-value=1.1e+02 Score=27.38 Aligned_cols=60 Identities=13% Similarity=0.176 Sum_probs=38.3
Q ss_pred CCceEEEcCC----cccHHHHHHHcCCCceEeeeccccCCCcccccccCHHHHHhcCCCEEEeeecccccc
Q 024925 84 ADVDVVVAPP----FVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHV 150 (260)
Q Consensus 84 ~~v~VvvaPp----~~~L~~v~~~~~~~i~vgAQnv~~~~~GA~TGEISa~mLkd~G~~~viIGHSERR~~ 150 (260)
.+.+.++.++ ...+..+.+.+..++.+- +.+.++ |..+.+.|+++|++.|+.|.+--|..
T Consensus 182 AGAd~i~~e~~~~~~~~~~~i~~~~~~~~P~i---~~~~~~----~~~~~~eL~~lGv~~v~~~~~~~raa 245 (295)
T 1s2w_A 182 AGADAILMHSKKADPSDIEAFMKAWNNQGPVV---IVPTKY----YKTPTDHFRDMGVSMVIWANHNLRAS 245 (295)
T ss_dssp TTCSEEEECCCSSSSHHHHHHHHHHTTCSCEE---ECCSTT----TTSCHHHHHHHTCCEEEECSHHHHHH
T ss_pred cCCCEEEEcCCCCCHHHHHHHHHHcCCCCCEE---EeCCCC----CCCCHHHHHHcCCcEEEEChHHHHHH
Confidence 4566666543 334555556554334442 222222 45679999999999999999988754
No 137
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=21.99 E-value=1.2e+02 Score=24.53 Aligned_cols=60 Identities=20% Similarity=0.206 Sum_probs=40.4
Q ss_pred ccCHHHHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCChHHHHH
Q 024925 126 EISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCF 193 (260)
Q Consensus 126 EISa~mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pIlCIGE~leere~g~~~~vl~ 193 (260)
..-+++|++.|++-+ +.....++ +.|.+.++.+++.+-..|++.|=+-- -....|.+.+.
T Consensus 30 ~~l~~~l~~~G~~v~------~~~iv~Dd-~~i~~al~~a~~~~~DlVittGG~s~-g~~D~t~eal~ 89 (164)
T 3pzy_A 30 PIITEWLAQQGFSSA------QPEVVADG-SPVGEALRKAIDDDVDVILTSGGTGI-APTDSTPDQTV 89 (164)
T ss_dssp HHHHHHHHHTTCEEC------CCEEECSS-HHHHHHHHHHHHTTCSEEEEESCCSS-STTCCHHHHHH
T ss_pred HHHHHHHHHCCCEEE------EEEEeCCH-HHHHHHHHHHHhCCCCEEEECCCCCC-CCCccHHHHHH
Confidence 345788999987643 33455667 88999999999877888888885532 12234555554
No 138
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=21.77 E-value=1.9e+02 Score=25.93 Aligned_cols=64 Identities=19% Similarity=0.209 Sum_probs=41.6
Q ss_pred cCCceEEEcCCcccHHHHHHHcC-CCceEeeeccccCCCcccccccCHHHHHhcCCCEEEeeecccccc
Q 024925 83 EADVDVVVAPPFVYIDQVKNSLT-DRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHV 150 (260)
Q Consensus 83 ~~~v~VvvaPp~~~L~~v~~~~~-~~i~vgAQnv~~~~~GA~TGEISa~mLkd~G~~~viIGHSERR~~ 150 (260)
+.+.|.++.|.......+..... -+..+-+ |+- ..| -|...|.+.|+++|++.|+.|++=-|..
T Consensus 182 ~AGAD~if~~~~~~~ee~~~~~~~~~~Pl~~-n~~--~~g-~tp~~~~~eL~~lGv~~v~~~~~~~raa 246 (298)
T 3eoo_A 182 EAGADMIFPEAMKTLDDYRRFKEAVKVPILA-NLT--EFG-STPLFTLDELKGANVDIALYCCGAYRAM 246 (298)
T ss_dssp HTTCSEEEECCCCSHHHHHHHHHHHCSCBEE-ECC--TTS-SSCCCCHHHHHHTTCCEEEECSHHHHHH
T ss_pred hcCCCEEEeCCCCCHHHHHHHHHHcCCCeEE-Eec--cCC-CCCCCCHHHHHHcCCeEEEEchHHHHHH
Confidence 35678877776666666554322 1122222 332 223 3677899999999999999998877754
No 139
>2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum}
Probab=21.59 E-value=3.8e+02 Score=25.00 Aligned_cols=52 Identities=19% Similarity=0.151 Sum_probs=30.8
Q ss_pred cCHHHHHhcCCCEEEee-ecccccc-----cCC--CHHHHHHHHHHHHHCCCeEEEEeCC
Q 024925 127 ISVEQLKDIGCKWVVLG-HSERRHV-----IGE--DDQFIGKKAAYALSEGLGVIACIGE 178 (260)
Q Consensus 127 ISa~mLkd~G~~~viIG-HSERR~~-----f~E--td~~I~~Kv~~Al~~gL~pIlCIGE 178 (260)
-..+.||++|++.|=|. +.++-.+ ..+ .-+.+.+=+..|.++||.+||.+..
T Consensus 43 ~d~~~i~~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~vv~~a~~~Gl~VIlD~H~ 102 (491)
T 2y8k_A 43 DQIARVKELGFNAVHLYAECFDPRYPAPGSKAPGYAVNEIDKIVERTRELGLYLVITIGN 102 (491)
T ss_dssp HHHGGGGGGTCCEEEEEEEECCTTTTSTTCCCTTTTHHHHHHHHHHHHHHTCEEEEEEEC
T ss_pred HHHHHHHHcCCCEEEECceeecccccCCCccChhHHHHHHHHHHHHHHHCCCEEEEECCC
Confidence 34455667777766443 1111001 111 1245666679999999999999875
No 140
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=21.42 E-value=98 Score=25.64 Aligned_cols=98 Identities=10% Similarity=0.097 Sum_probs=55.7
Q ss_pred cCHHHHHHHHHHHhhccccCCceEEEcCCc-----ccHHHHHHHcCCCceEeeeccccCCCcccccccCHHHHHhcCCCE
Q 024925 65 GTKESITKLVSDLNDAKLEADVDVVVAPPF-----VYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKW 139 (260)
Q Consensus 65 ~t~~~~~~l~~~l~~~~~~~~v~VvvaPp~-----~~L~~v~~~~~~~i~vgAQnv~~~~~GA~TGEISa~mLkd~G~~~ 139 (260)
.+.+++.++++.+... . .-+|+.+ |++ ..+..+++.. ++..+.. +++..+.| +.-.+++.++|+++
T Consensus 16 ~~~~~~~~~~~~~~~~-v-d~ie~g~-~~~~~~G~~~i~~lr~~~-~~~~i~l-d~~l~d~p----~~~~~~~~~aGad~ 86 (218)
T 3jr2_A 16 TNLTDAVAVASNVASY-V-DVIEVGT-ILAFAEGMKAVSTLRHNH-PNHILVC-DMKTTDGG----AILSRMAFEAGADW 86 (218)
T ss_dssp SSHHHHHHHHHHHGGG-C-SEEEECH-HHHHHHTTHHHHHHHHHC-TTSEEEE-EEEECSCH----HHHHHHHHHHTCSE
T ss_pred CCHHHHHHHHHHhcCC-c-eEEEeCc-HHHHhcCHHHHHHHHHhC-CCCcEEE-EEeecccH----HHHHHHHHhcCCCE
Confidence 5578888888876431 1 1134442 322 2233333332 2233332 45555433 44679999999999
Q ss_pred EEeeecccccccCCCHHHHHHHHHHHHHCCCeEEE-EeCC
Q 024925 140 VVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIA-CIGE 178 (260)
Q Consensus 140 viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pIl-CIGE 178 (260)
+.+ |.|-. ++.+..=++.+.+.|+.+++ ++|=
T Consensus 87 i~v-h~~~~------~~~~~~~~~~~~~~g~~~~~d~l~~ 119 (218)
T 3jr2_A 87 ITV-SAAAH------IATIAACKKVADELNGEIQIEIYGN 119 (218)
T ss_dssp EEE-ETTSC------HHHHHHHHHHHHHHTCEEEEECCSS
T ss_pred EEE-ecCCC------HHHHHHHHHHHHHhCCccceeeeec
Confidence 988 66642 23344444666778999887 6664
No 141
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=21.34 E-value=34 Score=31.09 Aligned_cols=19 Identities=11% Similarity=0.001 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHCCCeEEEE
Q 024925 157 FIGKKAAYALSEGLGVIAC 175 (260)
Q Consensus 157 ~I~~Kv~~Al~~gL~pIlC 175 (260)
.+.+-+..|.+.|...|++
T Consensus 117 ~~~~~i~~A~~LGa~~vvv 135 (394)
T 1xla_A 117 KVLHNIDLAAEMGAETFVM 135 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHhCCCEEEE
Confidence 3556667777788776654
No 142
>1muw_A Xylose isomerase; atomic resolution, disorder; 0.86A {Streptomyces olivochromogenes} SCOP: c.1.15.3 PDB: 1s5m_A* 1s5n_A* 2gyi_A* 1xyb_A* 1xyc_A* 1xya_A* 1xyl_A 1xym_A* 1dxi_A 3gnx_A* 1gw9_A* 1xib_A 1xic_A* 1xid_A* 1xie_A* 1xif_A* 1xig_A* 1xih_A* 1xii_A* 1xij_A ...
Probab=21.18 E-value=69 Score=28.90 Aligned_cols=19 Identities=11% Similarity=-0.001 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHCCCeEEEE
Q 024925 157 FIGKKAAYALSEGLGVIAC 175 (260)
Q Consensus 157 ~I~~Kv~~Al~~gL~pIlC 175 (260)
.+.+-+..|.+.|...|++
T Consensus 117 ~~~~~i~~A~~LGa~~vvv 135 (386)
T 1muw_A 117 KTIRNIDLAVELGAKTYVA 135 (386)
T ss_dssp HHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHhCCCEEEE
Confidence 3455556666777666544
No 143
>4g84_A Histidine--tRNA ligase, cytoplasmic; synthetase; 2.40A {Homo sapiens}
Probab=21.02 E-value=91 Score=28.69 Aligned_cols=43 Identities=30% Similarity=0.318 Sum_probs=29.8
Q ss_pred HHHHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCcH
Q 024925 129 VEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQL 180 (260)
Q Consensus 129 a~mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pIlCIGE~l 180 (260)
++.|++.|++-- +-|.+++ .+.+|++.|-+.|..-++-|||..
T Consensus 386 ~~~Lr~~Gi~ve-~~~~~~~--------~l~~q~k~A~~~g~~~~viiG~~E 428 (464)
T 4g84_A 386 VSELWDAGIKAE-LLYKKNP--------KLLNQLQYCEEAGIPLVAIIGEQE 428 (464)
T ss_dssp HHHHHHTTCCEE-CCSCSSC--------CHHHHHHHHHHHTCCEEEECCHHH
T ss_pred HHHHHHCCCcEE-EEeCCCC--------CHHHHHHHHHHCCCCEEEEECchh
Confidence 456667776632 2343333 278889999999999999999763
No 144
>1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3
Probab=20.85 E-value=2e+02 Score=26.85 Aligned_cols=51 Identities=16% Similarity=0.164 Sum_probs=35.4
Q ss_pred CHHHHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 024925 128 SVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 178 (260)
Q Consensus 128 Sa~mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pIlCIGE 178 (260)
..+.|++.|++.|=|-|++.-.+-.+.-+.+.+=+..|.++||.+|+.+-.
T Consensus 44 di~~ik~~G~N~VRipv~~g~~~~~~~l~~ld~vv~~a~~~Gl~VIlDlH~ 94 (464)
T 1wky_A 44 AIEGIANTGANTVRIVLSDGGQWTKDDIQTVRNLISLAEDNNLVAVLEVHD 94 (464)
T ss_dssp HHHHHHTTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred HHHHHHHCCCCEEEEEcCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEecC
Confidence 456788888888888776321122233345666679999999999998754
No 145
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=20.74 E-value=4e+02 Score=22.75 Aligned_cols=45 Identities=9% Similarity=-0.076 Sum_probs=30.9
Q ss_pred ccCHHHHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 024925 126 EISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 178 (260)
Q Consensus 126 EISa~mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pIlCIGE 178 (260)
+--.+.+++.|++++++. .-..+.+..-++.+.++|+.+|.-+..
T Consensus 112 ~~f~~~~~~aG~dgvii~--------dl~~ee~~~~~~~~~~~gl~~i~l~~p 156 (262)
T 2ekc_A 112 EKFCRLSREKGIDGFIVP--------DLPPEEAEELKAVMKKYVLSFVPLGAP 156 (262)
T ss_dssp HHHHHHHHHTTCCEEECT--------TCCHHHHHHHHHHHHHTTCEECCEECT
T ss_pred HHHHHHHHHcCCCEEEEC--------CCCHHHHHHHHHHHHHcCCcEEEEeCC
Confidence 344677999999999995 122244555668888999987654443
No 146
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=20.62 E-value=1.2e+02 Score=26.97 Aligned_cols=47 Identities=4% Similarity=0.094 Sum_probs=31.8
Q ss_pred HHHHHHHHHhcCCCCCceEEEEcccc---------------cccCCCCCCHHHHHHHHHHHHHH
Q 024925 192 CFQQLKAYADAIPSWDNVVIAYEPVW---------------AIGTGKVATPEQAQEVHAALRDW 240 (260)
Q Consensus 192 l~~Ql~~~l~~i~~~~~iiIAYEPvW---------------AIGTG~~aspe~iqe~~~~IR~~ 240 (260)
+.++++..+..++ .+-+|.|+|.| .+.+|..++|.+++++.+.||+.
T Consensus 177 Ld~~~~~~l~~~~--~~~~v~~H~af~Yfa~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~ 238 (312)
T 2o1e_A 177 LDKLYRTTAKKAE--KKEFITQHTAFGYLAKEYGLKQVPIAGLSPDQEPSAASLAKLKTYAKEH 238 (312)
T ss_dssp HHHHHHHHHHSCS--CCEEEESSCTTHHHHHHTTCEEEECSSCCSSSCCCHHHHHHHHHHTTSS
T ss_pred HHHHHHHHhhccC--CCEEEEECCchHHHHHHCCCeEEEeeccCCCCCCCHHHHHHHHHHHHHc
Confidence 4444555555543 34466777755 45568889999999999888763
No 147
>1nrp_R Receptor based peptide NR'S; serine proteinase/receptor; 3.00A {Homo sapiens} PDB: 1nrn_R 1nrq_R*
Probab=20.61 E-value=23 Score=20.55 Aligned_cols=7 Identities=57% Similarity=1.564 Sum_probs=5.5
Q ss_pred EEccccc
Q 024925 212 AYEPVWA 218 (260)
Q Consensus 212 AYEPvWA 218 (260)
-|||-|-
T Consensus 14 kyepfwe 20 (26)
T 1nrp_R 14 KYEPFWE 20 (26)
T ss_pred ccCcccc
Confidence 4999993
No 148
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=20.57 E-value=4.4e+02 Score=23.19 Aligned_cols=67 Identities=10% Similarity=0.093 Sum_probs=38.4
Q ss_pred HHHHHHHHCCCeEEEEeCCcHHHHh--cCChHHHHHHHHHHHHhcCCCCCceEEEEcccccccCCCCCCHHHHHHHHH
Q 024925 160 KKAAYALSEGLGVIACIGEQLQERE--AGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHA 235 (260)
Q Consensus 160 ~Kv~~Al~~gL~pIlCIGE~leere--~g~~~~vl~~Ql~~~l~~i~~~~~iiIAYEPvWAIGTG~~aspe~iqe~~~ 235 (260)
.-++.|.+.|..-++.+-=- +. ..-+.+-+.+-.+.+.+..+ -. +|.|-.+ +||...+++.+.+..+
T Consensus 94 ~la~~A~~~Gadavlv~~Py---y~~~~~~s~~~l~~~f~~va~a~~--lP-iilYn~P---~tg~~l~~~~~~~La~ 162 (309)
T 3fkr_A 94 ARSLRAQQLGAAMVMAMPPY---HGATFRVPEAQIFEFYARVSDAIA--IP-IMVQDAP---ASGTALSAPFLARMAR 162 (309)
T ss_dssp HHHHHHHHTTCSEEEECCSC---BTTTBCCCHHHHHHHHHHHHHHCS--SC-EEEEECG---GGCCCCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEcCCC---CccCCCCCHHHHHHHHHHHHHhcC--CC-EEEEeCC---CCCCCCCHHHHHHHHh
Confidence 34455555555555554311 10 12245666666777766543 12 5678876 3788888988776654
No 149
>1v95_A Nuclear receptor coactivator 5; coactivator independent of AF-2 function (CIA), structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: c.51.1.1
Probab=20.57 E-value=1.3e+02 Score=23.96 Aligned_cols=44 Identities=14% Similarity=0.123 Sum_probs=33.3
Q ss_pred HHHHhcCCCEEEeeecccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCcHH
Q 024925 130 EQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQ 181 (260)
Q Consensus 130 ~mLkd~G~~~viIGHSERR~~f~Etd~~I~~Kv~~Al~~gL~pIlCIGE~le 181 (260)
..|++.|++--+.--. +++.+++|+..|-..+.--++-||+...
T Consensus 29 ~~L~~~GiRvevD~~r--------~~e~Lg~kIR~a~~~kvPy~lVVG~kE~ 72 (130)
T 1v95_A 29 RKVRDLGMVVDLIFLN--------TEVSLSQALEDVSRGGSPFAIVITQQHQ 72 (130)
T ss_dssp HHHHTTTCCEEEEECT--------TSSCHHHHHHHHHHHTCSEEEEECHHHH
T ss_pred HHHHHCCCEEEEecCC--------CCCcHHHHHHHHHHcCCCEEEEEechHH
Confidence 5678888876654320 1344999999999999999999997754
No 150
>3u7v_A Beta-galactosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel, glyco_hydro_42; HET: MSE; 1.80A {Caulobacter crescentus}
Probab=20.41 E-value=1.4e+02 Score=29.45 Aligned_cols=45 Identities=7% Similarity=0.040 Sum_probs=32.8
Q ss_pred HHHHHhcCCCEEEee-----ecccccccCCCHHHHHHHHHHHHHCCCeEEEE
Q 024925 129 VEQLKDIGCKWVVLG-----HSERRHVIGEDDQFIGKKAAYALSEGLGVIAC 175 (260)
Q Consensus 129 a~mLkd~G~~~viIG-----HSERR~~f~Etd~~I~~Kv~~Al~~gL~pIlC 175 (260)
.+++|++|++.|-++ |--.+-.|+-+ .+.+=++.|-++||.+|++
T Consensus 79 W~~mKa~G~NtVr~~V~W~~hEP~~G~yDF~--~LD~~ldla~e~GL~VIL~ 128 (552)
T 3u7v_A 79 WPAIEKVGANTVQVPIAWEQIEPVEGQFDFS--YLDLLLEQARERKVRLVLL 128 (552)
T ss_dssp HHHHHHHTCSEEEEEEEHHHHCSBTTBCCCH--HHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHhCCCEEEEEehhhccCCCCCccChh--hHHHHHHHHHHCCCEEEEE
Confidence 348999999999998 64444333332 1444458999999999997
No 151
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=20.34 E-value=1.8e+02 Score=25.20 Aligned_cols=47 Identities=9% Similarity=0.268 Sum_probs=32.6
Q ss_pred HHHHHHHHHhcCCCCCceEEEEcccc---------------cccCCCCCCHHHHHHHHHHHHHH
Q 024925 192 CFQQLKAYADAIPSWDNVVIAYEPVW---------------AIGTGKVATPEQAQEVHAALRDW 240 (260)
Q Consensus 192 l~~Ql~~~l~~i~~~~~iiIAYEPvW---------------AIGTG~~aspe~iqe~~~~IR~~ 240 (260)
+.++++..+..++ .+-+|.|+|.| .+.+|..++|.+++++.+.||+.
T Consensus 164 Ld~~~~~~l~~~~--~~~~v~~H~af~Yf~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~ 225 (284)
T 3cx3_A 164 LTKKFQPKFEKAT--QKTFVTQHTAFSYLAKRFGLNQLGIAGISPEQEPSPRQLTEIQEFVKTY 225 (284)
T ss_dssp HHHHHHHHHHSCS--CCCEEEEESCCHHHHHHTTCCEEEEECSSTTCCCCSHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCC--CCEEEEECCchHHHHHHcCCEEeeccCCCCCCCCCHHHHHHHHHHHHHc
Confidence 4444555555543 33467787765 35668889999999999999873
No 152
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=20.20 E-value=4.7e+02 Score=23.42 Aligned_cols=93 Identities=14% Similarity=0.224 Sum_probs=54.5
Q ss_pred HHHHHhcCCCEEEeeecccccccC----CCHHHHHHHHHHHHHCCCeEEEEeCCcHHHHhcCChHHHHHHHHHHHHh-cC
Q 024925 129 VEQLKDIGCKWVVLGHSERRHVIG----EDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYAD-AI 203 (260)
Q Consensus 129 a~mLkd~G~~~viIGHSERR~~f~----Etd~~I~~Kv~~Al~~gL~pIlCIGE~leere~g~~~~vl~~Ql~~~l~-~i 203 (260)
..||+|+|++-+ ++|. ..-+.+..=++.|-++|+ .+==-| |...+-+.+=++..++ ++
T Consensus 174 iaml~dmG~~Sv--------KffPM~Gl~~leEl~avAkAca~~g~-~lEPTG--------GIdl~Nf~~I~~i~l~aGv 236 (275)
T 3m6y_A 174 IALVRDMGGNSL--------KYFPMKGLAHEEEYRAVAKACAEEGF-ALEPTG--------GIDKENFETIVRIALEANV 236 (275)
T ss_dssp HHHHHHHTCCEE--------EECCCTTTTTHHHHHHHHHHHHHHTC-EEEEBS--------SCCTTTHHHHHHHHHHTTC
T ss_pred HHHHHHcCCCee--------eEeecCCcccHHHHHHHHHHHHHcCc-eECCCC--------CccHhHHHHHHHHHHHcCC
Confidence 479999998765 4442 234556666789999999 221122 2222222222333332 33
Q ss_pred CC-CCceEEEEcccccccCCCCCCHHHHHHHHHHHHHHHH
Q 024925 204 PS-WDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLK 242 (260)
Q Consensus 204 ~~-~~~iiIAYEPvWAIGTG~~aspe~iqe~~~~IR~~l~ 242 (260)
+. .-+ -|--+===.||.+ .||++++..+.+++++.
T Consensus 237 ~~viPH---IYsSIIDk~TG~T-rpedV~~ll~~~K~l~~ 272 (275)
T 3m6y_A 237 EQVIPH---VYSSIIDKETGNT-KVEAVRELLAVVKKLVD 272 (275)
T ss_dssp SCBCCE---ECGGGBCTTTCCB-CHHHHHHHHHHHHHHHT
T ss_pred Ceeccc---ccceeccCCCCCC-CHHHHHHHHHHHHHHHh
Confidence 31 111 2544222367877 69999999999998875
No 153
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=20.19 E-value=2.1e+02 Score=25.81 Aligned_cols=79 Identities=19% Similarity=0.229 Sum_probs=47.4
Q ss_pred CCceEEEcCCcccHHHHHH---HcCCCceEeeeccccCCCcccccccCHHHHHhcCCCEEEeeecccccccCCCHHHHHH
Q 024925 84 ADVDVVVAPPFVYIDQVKN---SLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGK 160 (260)
Q Consensus 84 ~~v~VvvaPp~~~L~~v~~---~~~~~i~vgAQnv~~~~~GA~TGEISa~mLkd~G~~~viIGHSERR~~f~Etd~~I~~ 160 (260)
.+.|.++.|.......+.. .+. ++.+-+ |+- ..| -|..+|.+.|+++|++.|+.+.+--|..+.- +..
T Consensus 190 AGAD~ifi~~~~~~~~~~~i~~~~~-~~Pv~~-n~~--~~g-~~p~~t~~eL~~lGv~~v~~~~~~~raa~~a----~~~ 260 (307)
T 3lye_A 190 EGADVGLLEGFRSKEQAAAAVAALA-PWPLLL-NSV--ENG-HSPLITVEEAKAMGFRIMIFSFATLAPAYAA----IRE 260 (307)
T ss_dssp TTCSEEEECCCSCHHHHHHHHHHHT-TSCBEE-EEE--TTS-SSCCCCHHHHHHHTCSEEEEETTTHHHHHHH----HHH
T ss_pred CCCCEEEecCCCCHHHHHHHHHHcc-CCceeE-Eee--cCC-CCCCCCHHHHHHcCCeEEEEChHHHHHHHHH----HHH
Confidence 4667777766555554443 332 232311 332 223 3557899999999999999999988865432 333
Q ss_pred HHHHHHHCCCe
Q 024925 161 KAAYALSEGLG 171 (260)
Q Consensus 161 Kv~~Al~~gL~ 171 (260)
-.+..++.|-.
T Consensus 261 ~~~~l~~~g~~ 271 (307)
T 3lye_A 261 TLVRLRDHGVV 271 (307)
T ss_dssp HHHHHHHHSCC
T ss_pred HHHHHHHhCCC
Confidence 33445555543
Done!