RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= 024925
(260 letters)
>d1r2ra_ c.1.1.1 (A:) Triosephosphate isomerase {Rabbit (Oryctolagus
cuniculus) [TaxId: 9986]}
Length = 246
Score = 153 bits (387), Expect = 2e-46
Identities = 120/193 (62%), Positives = 142/193 (73%)
Query: 52 SNKFFVGGNWKCNGTKESITKLVSDLNDAKLEADVDVVVAPPFVYIDQVKNSLTDRIEIA 111
S KFFVGGNWK NG K+++ +L++ LN AK+ AD +VV APP YID + L +I +A
Sbjct: 1 SRKFFVGGNWKMNGRKKNLGELITTLNAAKVPADTEVVCAPPTAYIDFARQKLDPKIAVA 60
Query: 112 AQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLG 171
AQN + GAFTGEIS +KD G WVVLGHSERRHV GE D+ IG+K A+ALSEGLG
Sbjct: 61 AQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALSEGLG 120
Query: 172 VIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQ 231
VIACIGE+L EREAG T V F+Q K AD + W VV+AYEPVWAIGTGK ATP+QAQ
Sbjct: 121 VIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQ 180
Query: 232 EVHAALRDWLKNM 244
EVH LR WLK+
Sbjct: 181 EVHEKLRGWLKSN 193
>d1b9ba_ c.1.1.1 (A:) Triosephosphate isomerase {Thermotoga maritima
[TaxId: 2336]}
Length = 252
Score = 149 bits (378), Expect = 5e-45
Identities = 88/197 (44%), Positives = 122/197 (61%), Gaps = 4/197 (2%)
Query: 52 SNKFFVGGNWKCNGTKESITKLVSDLNDAKLEA-DVDVVVAPPFVYIDQVKNSLTD-RIE 109
+ K + GNWK + T K VS L + + + ++VV PPF + +V L+ I+
Sbjct: 1 TRKLILAGNWKMHKTISEAKKFVSLLVNELHDVKEFEIVVCPPFTALSEVGEILSGRNIK 60
Query: 110 IAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEG 169
+ AQN + GAFTGEIS L++IG ++V++GHSERR + EDD+FI +K L +G
Sbjct: 61 LGAQNVFYEDQGAFTGEISPLMLQEIGVEYVIVGHSERRRIFKEDDEFINRKVKAVLEKG 120
Query: 170 LGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIP--SWDNVVIAYEPVWAIGTGKVATP 227
+ I C+GE L+ERE G TF V +Q++ + VVIAYEPVWAIGTG+VATP
Sbjct: 121 MTPILCVGETLEEREKGLTFCVVEKQVREGFYGLDKEEAKRVVIAYEPVWAIGTGRVATP 180
Query: 228 EQAQEVHAALRDWLKNM 244
+QAQEVHA +R L M
Sbjct: 181 QQAQEVHAFIRKLLSEM 197
>d1mo0a_ c.1.1.1 (A:) Triosephosphate isomerase {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 257
Score = 145 bits (367), Expect = 2e-43
Identities = 107/193 (55%), Positives = 135/193 (69%)
Query: 52 SNKFFVGGNWKCNGTKESITKLVSDLNDAKLEADVDVVVAPPFVYIDQVKNSLTDRIEIA 111
+ KFFVGGNWK NG S+ +V+ LN + + VDVVVAPP Y+ K+ L + +A
Sbjct: 10 TRKFFVGGNWKMNGDYASVDGIVTFLNASADNSSVDVVVAPPAPYLAYAKSKLKAGVLVA 69
Query: 112 AQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLG 171
AQN + GAFTGEIS +KD+G +WV+LGHSERRHV GE D I +K +AL G+
Sbjct: 70 AQNCYKVPKGAFTGEISPAMIKDLGLEWVILGHSERRHVFGESDALIAEKTVHALEAGIK 129
Query: 172 VIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQ 231
V+ CIGE+L+EREAG T DV F+QL+A D SW+N+VIAYEPVWAIGTGK A+ EQAQ
Sbjct: 130 VVFCIGEKLEEREAGHTKDVNFRQLQAIVDKGVSWENIVIAYEPVWAIGTGKTASGEQAQ 189
Query: 232 EVHAALRDWLKNM 244
EVH +R +LK
Sbjct: 190 EVHEWIRAFLKEK 202
>d1neya_ c.1.1.1 (A:) Triosephosphate isomerase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 247
Score = 141 bits (356), Expect = 7e-42
Identities = 98/197 (49%), Positives = 140/197 (71%), Gaps = 1/197 (0%)
Query: 52 SNKFFVGGNWKCNGTKESITKLVSDLNDAKLEADVDVVVAPPFVYIDQVKNSL-TDRIEI 110
+ FFVGGN+K NG+K+SI ++V LN A + +V+VV+ PP Y+D + + ++ +
Sbjct: 1 ARTFFVGGNFKLNGSKQSIKEIVERLNTASIPENVEVVICPPATYLDYSVSLVKKPQVTV 60
Query: 111 AAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGL 170
AQN+++ GAFTGE SV+Q+KD+G K+V+LGHSERR EDD+FI K +AL +G+
Sbjct: 61 GAQNAYLKASGAFTGENSVDQIKDVGAKYVILGHSERRSYFHEDDKFIADKTKFALGQGV 120
Query: 171 GVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQA 230
GVI CIGE L+E++AGKT DV +QL A + + + NVV+AYEPVWAIGTG ATPE A
Sbjct: 121 GVILCIGETLEEKKAGKTLDVVERQLNAVLEEVKDFTNVVVAYEPVWAIGTGLAATPEDA 180
Query: 231 QEVHAALRDWLKNMSQQ 247
Q++HA++R +L +
Sbjct: 181 QDIHASIRKFLASKLGD 197
>d1n55a_ c.1.1.1 (A:) Triosephosphate isomerase {Leishmania mexicana
[TaxId: 5665]}
Length = 249
Score = 136 bits (343), Expect = 8e-40
Identities = 98/191 (51%), Positives = 121/191 (63%), Gaps = 2/191 (1%)
Query: 56 FVGGNWKCNGTKESITKLVSDLNDAKLEADVDVVVAPPFVYIDQVKNSLTDRIEIAAQNS 115
NWKCNGT SI KLV N+ + DV VVAP FV+I V+ L + + + +
Sbjct: 6 IAAANWKCNGTTASIEKLVQVFNEHTISHDVQCVVAPTFVHIPLVQAKLRNPKYVISAQN 65
Query: 116 WVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIAC 175
+ K GAFTGE+S+ LKDIG WV+LGHSERR GE D+ + +K + A +G VIAC
Sbjct: 66 AIAKSGAFTGEVSMPILKDIGVHWVILGHSERRTYYGETDEIVAQKVSEACKQGFMVIAC 125
Query: 176 IGEQLQEREAGKTFDVCFQQLKAYADAIPS--WDNVVIAYEPVWAIGTGKVATPEQAQEV 233
IGE LQ+REA +T V Q A A + W+ VV+AYEPVWAIGTGKVATPEQAQEV
Sbjct: 126 IGETLQQREANQTAKVVLSQTSAIAAKLTKDAWNQVVLAYEPVWAIGTGKVATPEQAQEV 185
Query: 234 HAALRDWLKNM 244
H LR W+
Sbjct: 186 HLLLRKWVSEN 196
>d1o5xa_ c.1.1.1 (A:) Triosephosphate isomerase {Plasmodium
falciparum [TaxId: 5833]}
Length = 246
Score = 133 bits (336), Expect = 6e-39
Identities = 82/195 (42%), Positives = 119/195 (61%), Gaps = 1/195 (0%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLE-ADVDVVVAPPFVYIDQVKNSLTDRIEIAA 112
K+FV NWKCNGT ESI L + N+ + + +DVVV P V+ D + L +
Sbjct: 2 KYFVAANWKCNGTLESIKSLTNSFNNLDFDPSKLDVVVFPVSVHYDHTRKLLQSKFSTGI 61
Query: 113 QNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGV 172
QN G++TGE+S E KD+ ++V++GH ERR E D+ + +K +L L
Sbjct: 62 QNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHFERRKYFHETDEDVREKLQASLKNNLKA 121
Query: 173 IACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQE 232
+ C GE L++RE KT +V +Q+KA+ D I ++DNV++ YEP+WAIGTGK ATPEQAQ
Sbjct: 122 VVCFGESLEQREQNKTIEVITKQVKAFVDLIDNFDNVILVYEPLWAIGTGKTATPEQAQL 181
Query: 233 VHAALRDWLKNMSQQ 247
VH +R +K+ +
Sbjct: 182 VHKEIRKIVKDTCGE 196
>d2btma_ c.1.1.1 (A:) Triosephosphate isomerase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 251
Score = 129 bits (325), Expect = 3e-37
Identities = 78/195 (40%), Positives = 108/195 (55%), Gaps = 4/195 (2%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEAD-VDVVVAPPFVYIDQVKNSL-TDRIEIA 111
K + GNWK NGT + V D+ AD V VV PF+++D++ + ++I
Sbjct: 2 KPIIAGNWKMNGTLAEAVQFVEDVKGHVPPADEVISVVCAPFLFLDRLVQAADGTDLKIG 61
Query: 112 AQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLG 171
AQ GA+TGE+S LKD+G +V+LGHSERR + E D+ + KK A + GL
Sbjct: 62 AQTMHFADQGAYTGEVSPVMLKDLGVTYVILGHSERRQMFAETDETVNKKVLAAFTRGLI 121
Query: 172 VIACIGEQLQEREAGKTFDVCFQQLKAYADAIP--SWDNVVIAYEPVWAIGTGKVATPEQ 229
I C GE L+EREAG+T V Q++ + VIAYEP+WAIGTGK +TPE
Sbjct: 122 PIICCGESLEEREAGQTNAVVASQVEKALAGLTPEQVKQAVIAYEPIWAIGTGKSSTPED 181
Query: 230 AQEVHAALRDWLKNM 244
A V +R + +
Sbjct: 182 ANSVCGHIRSVVSRL 196
>d1m6ja_ c.1.1.1 (A:) Triosephosphate isomerase {Entamoeba
histolytica [TaxId: 5759]}
Length = 260
Score = 129 bits (324), Expect = 6e-37
Identities = 94/203 (46%), Positives = 128/203 (63%), Gaps = 11/203 (5%)
Query: 52 SNKFFVGGNWKCNGTKESITKLVSDLN---DAKLEADVDVVVAPPFVYIDQVKN-----S 103
+ KF VGGNWKCNGT SI L + DA+L V+V+V PF+YI +V+ +
Sbjct: 2 AGKFVVGGNWKCNGTLASIETLTKGVAASVDAELAKKVEVIVGVPFIYIPKVQQILAGEA 61
Query: 104 LTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAA 163
I ++A+N+W K GA+TGE+ V L D +V+LGHSERR + E ++ + +K
Sbjct: 62 NGANILVSAENAWT-KSGAYTGEVHVGMLVDCQVPYVILGHSERRQIFHESNEQVAEKVK 120
Query: 164 YALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIP--SWDNVVIAYEPVWAIGT 221
A+ GL VIACIGE +R A +T +V QLKA +AI +W N+++AYEPVWAIGT
Sbjct: 121 VAIDAGLKVIACIGETEAQRIANQTEEVVAAQLKAINNAISKEAWKNIILAYEPVWAIGT 180
Query: 222 GKVATPEQAQEVHAALRDWLKNM 244
GK ATP+QAQEVH +R W+
Sbjct: 181 GKTATPDQAQEVHQYIRKWMTEN 203
>d1kv5a_ c.1.1.1 (A:) Triosephosphate isomerase {Trypanosoma brucei
[TaxId: 5691]}
Length = 249
Score = 126 bits (317), Expect = 5e-36
Identities = 91/193 (47%), Positives = 121/193 (62%), Gaps = 2/193 (1%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEADVDVVVAPPFVYIDQVKNSLTDRIEIAAQ 113
+ NWKCNG+++S+++L+ N + DV VVA FV++ K L+ + A
Sbjct: 4 QPIAAANWKCNGSQQSLSELIDLFNSTSINHDVQCVVASTFVHLAMTKERLSHPKFVIAA 63
Query: 114 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 173
+ + K GAFTGE+S+ LKD G W+VLGHSERR GE ++ + K A A++ G VI
Sbjct: 64 QNAIAKSGAFTGEVSLPILKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVI 123
Query: 174 ACIGEQLQEREAGKTFDVCFQQLKAYADA--IPSWDNVVIAYEPVWAIGTGKVATPEQAQ 231
ACIGE LQERE+G+T V Q+ A A W VVIAYEPVWAIGTGKVATP+QAQ
Sbjct: 124 ACIGETLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQ 183
Query: 232 EVHAALRDWLKNM 244
E HA + W+ +
Sbjct: 184 EAHALISSWVSSK 196
>d1aw1a_ c.1.1.1 (A:) Triosephosphate isomerase {Vibrio marinus
[TaxId: 90736]}
Length = 255
Score = 126 bits (316), Expect = 8e-36
Identities = 83/208 (39%), Positives = 120/208 (57%), Gaps = 6/208 (2%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDA-KLEADVDVVVAPPFVYIDQVKNSLTDR---IE 109
V GNWK NG+KE + L++ LN + VDV VAPP +++D + +LT+ I
Sbjct: 2 HPVVMGNWKLNGSKEMVVDLLNGLNAELEGVTGVDVAVAPPALFVDLAERTLTEAGSAII 61
Query: 110 IAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEG 169
+ AQN+ + GAFTG++S LK+ G +++GHSERR E D+F+ KK A+ G
Sbjct: 62 LGAQNTDLNNSGAFTGDMSPAMLKEFGATHIIIGHSERREYHAESDEFVAKKFAFLKENG 121
Query: 170 LGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIP--SWDNVVIAYEPVWAIGTGKVATP 227
L + CIGE + EAG+T VC +QL A + + + +IAYEP+WAIGTGK AT
Sbjct: 122 LTPVLCIGESDAQNEAGETMAVCARQLDAVINTQGVEALEGAIIAYEPIWAIGTGKAATA 181
Query: 228 EQAQEVHAALRDWLKNMSQQTLPLKHVL 255
E AQ +HA +R + S+ +
Sbjct: 182 EDAQRIHAQIRAHIAEKSEAVAKNVVIQ 209
>d1trea_ c.1.1.1 (A:) Triosephosphate isomerase {Escherichia coli
[TaxId: 562]}
Length = 255
Score = 121 bits (305), Expect = 3e-34
Identities = 88/206 (42%), Positives = 115/206 (55%), Gaps = 4/206 (1%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLE-ADVDVVVAPPFVYIDQVKNSLTD-RIEIA 111
V GNWK NG++ + +LVS+L A V +APP +YID K I +
Sbjct: 3 HPLVMGNWKLNGSRHMVHELVSNLRKELAGVAGCAVAIAPPEMYIDMAKREAEGSHIMLG 62
Query: 112 AQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLG 171
AQN + GAFTGE S LKDIG +++++GHSERR E D+ I KK A +GL
Sbjct: 63 AQNVNLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLT 122
Query: 172 VIACIGEQLQEREAGKTFDVCFQQLKAYADAIP--SWDNVVIAYEPVWAIGTGKVATPEQ 229
+ CIGE E EAGKT +VC +Q+ A +++ VIAYEPVWAIGTGK ATP Q
Sbjct: 123 PVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQ 182
Query: 230 AQEVHAALRDWLKNMSQQTLPLKHVL 255
AQ VH +RD + + +
Sbjct: 183 AQAVHKFIRDHIAKVDANIAEQVIIQ 208
>d1w0ma_ c.1.1.1 (A:) Triosephosphate isomerase {Thermoproteus tenax
[TaxId: 2271]}
Length = 226
Score = 98.1 bits (243), Expect = 2e-25
Identities = 44/189 (23%), Positives = 73/189 (38%), Gaps = 26/189 (13%)
Query: 54 KFFVGGNWKCNGTK--ESITKLVSDLNDAKLEADVDVVVAPPFVYIDQVKNSLTDRIEIA 111
+ N+K G + +L A E V++VVAP + + V S+ I +
Sbjct: 3 LPILIINFKAYGEAAGKRAVELAKAAERAARELGVNIVVAPNHLELGLVSQSV--DIPVY 60
Query: 112 AQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLG 171
AQ + V GGA T +S+E +K+ G V+L HSE + + + A A S GL
Sbjct: 61 AQGADVEAGGAHTAHVSLENIKEAGGSGVILNHSEAPLKLNDLAR----LVAKAKSLGLD 116
Query: 172 VIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQ 231
V+ C + + +A EP IGTG+ + + +
Sbjct: 117 VVVCAPDPRTSLA------------------AAALGPHAVAVEPPELIGTGRAVSRYKPE 158
Query: 232 EVHAALRDW 240
+ +
Sbjct: 159 AIVETVGLV 167
>d1hg3a_ c.1.1.1 (A:) Triosephosphate isomerase {Archaeon Pyrococcus
woesei [TaxId: 2262]}
Length = 224
Score = 78.9 bits (193), Expect = 3e-18
Identities = 36/189 (19%), Positives = 69/189 (36%), Gaps = 26/189 (13%)
Query: 54 KFFVGGNWKCNGTK--ESITKLVSDLNDAKLEADVDVVVAPPFVYIDQVKNSLTDRIEIA 111
+ + N+K + ++ E V +VVAP V + + S+ I +
Sbjct: 5 EPIIAINFKTYIEATGKRALEIAKAAEKVYKETGVTIVVAPQLVDLRMIAESV--EIPVF 62
Query: 112 AQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLG 171
AQ+ K G+ TG + E +K+ G +L HSE R ++ + + I + L
Sbjct: 63 AQHIDPIKPGSHTGHVLPEAVKEAGAVGTLLNHSENRMILADLEAAIRRAEEVGL----- 117
Query: 172 VIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQ 231
+ A + A+ + + +A EP IGTG + + +
Sbjct: 118 -----------------MTMVCSNNPAVSAAVAALNPDYVAVEPPELIGTGIPVSKAKPE 160
Query: 232 EVHAALRDW 240
+ +
Sbjct: 161 VITNTVELV 169
>d2rhwa1 c.69.1.10 (A:4-286)
2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase
(BPHD) {Burkholderia xenovorans [TaxId: 36873]}
Length = 283
Score = 29.0 bits (63), Expect = 0.46
Identities = 10/53 (18%), Positives = 16/53 (30%), Gaps = 7/53 (13%)
Query: 191 VCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKN 243
V I V + G A E A E + + D+L++
Sbjct: 237 VPLDHGLKLLWNIDDARLHVFS-------KCGHWAQWEHADEFNRLVIDFLRH 282
>d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId:
51671]}
Length = 279
Score = 28.4 bits (61), Expect = 0.76
Identities = 12/49 (24%), Positives = 19/49 (38%), Gaps = 7/49 (14%)
Query: 194 QQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLK 242
+ + A+P D V + G A EV+AAL+ +L
Sbjct: 237 ATARRFHQAVPEADYVEVE-------GAPHGLLWTHADEVNAALKTFLA 278
>d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans
[TaxId: 1916]}
Length = 275
Score = 28.4 bits (61), Expect = 0.78
Identities = 4/50 (8%), Positives = 13/50 (26%), Gaps = 7/50 (14%)
Query: 194 QQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKN 243
A+ + + G + ++ L ++K+
Sbjct: 233 DAAPKSAELLANATLKSYE-------GLPHGMLSTHPEVLNPDLLAFVKS 275
>d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate
hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId:
1831]}
Length = 281
Score = 28.3 bits (61), Expect = 0.90
Identities = 6/46 (13%), Positives = 13/46 (28%), Gaps = 7/46 (15%)
Query: 197 KAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLK 242
+ + VV+ G A E+ + L + +
Sbjct: 242 LYLTKHLKHAELVVLD-------RCGHWAQLERWDAMGPMLMEHFR 280
>d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces
aureofaciens [TaxId: 1894]}
Length = 277
Score = 27.9 bits (60), Expect = 1.3
Identities = 11/49 (22%), Positives = 19/49 (38%), Gaps = 7/49 (14%)
Query: 194 QQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLK 242
+ + A+PS + V + G A+EV+ AL +L
Sbjct: 235 NTARVFHKALPSAEYVEVE-------GAPHGLLWTHAEEVNTALLAFLA 276
>d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase,
C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 322
Score = 27.5 bits (59), Expect = 1.6
Identities = 11/50 (22%), Positives = 16/50 (32%), Gaps = 7/50 (14%)
Query: 194 QQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKN 243
Q + D IP I G ++ EV+ L WL +
Sbjct: 276 QMSQHMEDWIPHLKRGHIE-------DCGHWTQMDKPTEVNQILIKWLDS 318
>d2oika1 d.13.1.1 (A:6-144) Histidine triad protein Mfla2506
{Methylobacillus flagellatus [TaxId: 405]}
Length = 139
Score = 26.8 bits (58), Expect = 1.9
Identities = 7/40 (17%), Positives = 11/40 (27%)
Query: 203 IPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLK 242
IP + VW + Q AL+ +
Sbjct: 96 IPRFKRDRHFPNSVWGETKRESLPQALDQGSTTALKKAIS 135
>d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD
{Pseudomonas fluorescens [TaxId: 294]}
Length = 271
Score = 27.1 bits (58), Expect = 2.2
Identities = 6/52 (11%), Positives = 11/52 (21%), Gaps = 7/52 (13%)
Query: 191 VCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLK 242
V + I V G EQ + + ++
Sbjct: 225 VPLSSSLRLGELIDRAQLHVFG-------RCGHWTQIEQTDRFNRLVVEFFN 269
>d1sraa_ a.39.1.3 (A:) C-terminal (EC) domain of
BM-40/SPARC/osteonectin {Human (Homo sapiens) [TaxId:
9606]}
Length = 151
Score = 26.1 bits (57), Expect = 2.7
Identities = 7/22 (31%), Positives = 10/22 (45%)
Query: 226 TPEQAQEVHAALRDWLKNMSQQ 247
+ E +RDWLKN+
Sbjct: 4 LDSELTEFPLRMRDWLKNVLVT 25
>d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH
{Escherichia coli [TaxId: 562]}
Length = 256
Score = 26.3 bits (56), Expect = 3.7
Identities = 5/52 (9%), Positives = 11/52 (21%), Gaps = 7/52 (13%)
Query: 191 VCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLK 242
V + + P ++ + A E L +
Sbjct: 208 VPRKVVPMLDKLWPHSESYIFA-------KAAHAPFISHPAEFCHLLVALKQ 252
>d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC
{Janthinobacterium sp. J3 [TaxId: 213804]}
Length = 268
Score = 26.3 bits (56), Expect = 4.0
Identities = 9/51 (17%), Positives = 15/51 (29%), Gaps = 7/51 (13%)
Query: 191 VCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWL 241
V + + D I +I G A E ++ A +L
Sbjct: 222 VPVETAYKFLDLIDDSWGYIIP-------HCGHWAMIEHPEDFANATLSFL 265
>d1jnda1 c.1.8.5 (A:2-278,A:371-420) Imaginal disc growth factor-2
{Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 327
Score = 26.3 bits (57), Expect = 4.3
Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 3/36 (8%)
Query: 139 WVVLGHSERRHVIG---EDDQFIGKKAAYALSEGLG 171
W+ G + +G +D KAAYA + LG
Sbjct: 261 WLSQGFPSNKINLGVATDDPDSASNKAAYARVKNLG 296
>d1lfka_ a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatopsis
orientalis [TaxId: 31958]}
Length = 394
Score = 26.3 bits (56), Expect = 4.4
Identities = 16/73 (21%), Positives = 27/73 (36%), Gaps = 2/73 (2%)
Query: 137 CKWVVLGHSERRHVIGED-DQFIGKKAAYA-LSEGLGVIACIGEQLQEREAGKTFDVCFQ 194
L + R + D D+ + ++ G GV C+G L E F ++
Sbjct: 303 SVICSLPAANRDPALAPDVDRLDVTREPIPHVAFGHGVHHCLGAALARLELRTVFTELWR 362
Query: 195 QLKAYADAIPSWD 207
+ A A P+ D
Sbjct: 363 RFPALRLADPAQD 375
>d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio
cholerae [TaxId: 666]}
Length = 124
Score = 25.2 bits (55), Expect = 4.4
Identities = 14/61 (22%), Positives = 23/61 (37%), Gaps = 7/61 (11%)
Query: 104 LTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKW--VVLGHSERRHVIGEDDQFIGKK 161
T R + + VGK T I E L + +++G + G D +I +
Sbjct: 46 STARNMRTYEGN-VGKINIHTLPIITEWLDKHQVPYDEILVG----KPWCGHDGFYIDDR 100
Query: 162 A 162
A
Sbjct: 101 A 101
>d1x4ta1 a.2.15.1 (A:7-86) Pre-mRNA-splicing factor ISY1 homolog
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 80
Score = 24.6 bits (54), Expect = 4.5
Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 7/48 (14%)
Query: 35 VSSRRPRRSSSVVAMASSNKFFVGGNWKCNGTKESITKLVSDLNDAKL 82
V RRP +S + + K W+ E I+K V+ + +A L
Sbjct: 3 VKERRPFLASECTELPKAEK------WRRQIIGE-ISKKVAQIQNAGL 43
>d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens
[TaxId: 294]}
Length = 273
Score = 26.0 bits (55), Expect = 4.8
Identities = 7/46 (15%), Positives = 15/46 (32%), Gaps = 7/46 (15%)
Query: 197 KAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLK 242
A A + + + G T +++A L ++K
Sbjct: 234 IASAALVKGSTLKIYS-------GAPHGLTDTHKDQLNADLLAFIK 272
>d1ls1a1 a.24.13.1 (A:1-88) Signal sequence recognition protein
Ffh {Thermus aquaticus [TaxId: 271]}
Length = 88
Score = 24.3 bits (53), Expect = 5.9
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 66 TKESITKLVSDLNDAKLEADVDVVVA 91
T+E + + ++ A ++ADV++ VA
Sbjct: 23 TEEDLKATLREIRRALMDADVNLEVA 48
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain
{Fungi (Fusarium sp.) [TaxId: 29916]}
Length = 387
Score = 25.2 bits (53), Expect = 9.0
Identities = 8/60 (13%), Positives = 16/60 (26%)
Query: 6 STNCAQFSGLRRSSPTQSYSQHVNSHLRLVSSRRPRRSSSVVAMASSNKFFVGGNWKCNG 65
F + Y ++ + + R S+ + + F GG C
Sbjct: 308 QRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGGLCGD 367
>d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC
{Streptomyces purpurascens [TaxId: 1924]}
Length = 297
Score = 25.3 bits (53), Expect = 9.9
Identities = 7/52 (13%), Positives = 13/52 (25%), Gaps = 7/52 (13%)
Query: 194 QQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNMS 245
K A IP+ I G G + + ++ +
Sbjct: 253 PHGKHLAGLIPTARLAEIP-------GMGHALPSSVHGPLAEVILAHTRSAA 297
>d1itxa1 c.1.8.5 (A:33-337,A:410-451) Chitinase A1 {Bacillus
circulans [TaxId: 1397]}
Length = 347
Score = 25.2 bits (54), Expect = 10.0
Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 10/64 (15%)
Query: 111 AAQNSWVGKGGAFTGEISVEQLKDIGC--KWVVLGHSERRHVIG-EDDQFIGKKAAYALS 167
AA + V F + D G +VLG + +D + +G K AY S
Sbjct: 268 AASAAGVPDANTFNVAAGAQGHLDAGVPAAKLVLG-------VPFDDAESVGYKTAYIKS 320
Query: 168 EGLG 171
+GLG
Sbjct: 321 KGLG 324
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.316 0.130 0.386
Gapped
Lambda K H
0.267 0.0370 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 932,114
Number of extensions: 41571
Number of successful extensions: 200
Number of sequences better than 10.0: 1
Number of HSP's gapped: 186
Number of HSP's successfully gapped: 35
Length of query: 260
Length of database: 2,407,596
Length adjustment: 83
Effective length of query: 177
Effective length of database: 1,268,006
Effective search space: 224437062
Effective search space used: 224437062
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.8 bits)