Query 024926
Match_columns 260
No_of_seqs 172 out of 343
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 16:51:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024926.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024926hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dkq_A PKHD-type hydroxylase S 99.8 1.1E-19 3.7E-24 162.9 13.7 163 32-217 19-199 (243)
2 2jig_A Prolyl-4 hydroxylase; h 99.8 8.6E-19 3E-23 153.4 13.7 175 31-217 19-222 (224)
3 3itq_A Prolyl 4-hydroxylase, a 99.8 7.3E-19 2.5E-23 154.9 12.9 154 31-215 38-215 (216)
4 2hbt_A EGL nine homolog 1; pro 99.5 8.3E-13 2.8E-17 118.0 16.0 169 32-219 26-220 (247)
5 3kt7_A PKHD-type hydroxylase T 98.4 1.6E-06 5.6E-11 86.2 13.3 197 6-214 15-230 (633)
6 2rg4_A Uncharacterized protein 98.2 1.8E-05 6E-10 69.0 11.7 94 115-210 103-205 (216)
7 2rdq_A 1-deoxypentalenic acid 97.9 0.00013 4.6E-09 64.4 13.0 88 127-214 134-254 (288)
8 2a1x_A Phytanoyl-COA dioxygena 97.8 0.00037 1.3E-08 62.4 13.3 84 130-213 142-255 (308)
9 2fct_A Syringomycin biosynthes 97.7 0.00065 2.2E-08 60.8 13.7 44 173-216 218-264 (313)
10 2opw_A Phyhd1 protein; double- 97.7 0.00042 1.4E-08 61.4 12.0 89 124-212 147-266 (291)
11 3gja_A CYTC3; halogenase, beta 97.5 0.00051 1.8E-08 62.7 10.6 44 173-216 220-266 (319)
12 3emr_A ECTD; double stranded b 97.5 0.00045 1.5E-08 62.9 10.0 186 19-213 36-269 (310)
13 3nnf_A CURA; non-HAEM Fe(II)/a 96.9 0.0018 6.1E-08 59.8 7.5 177 33-216 41-278 (344)
14 3s57_A Alpha-ketoglutarate-dep 96.5 0.029 9.8E-07 48.2 11.9 158 33-208 12-199 (204)
15 2iuw_A Alkylated repair protei 96.5 0.027 9.3E-07 49.4 11.9 160 32-209 40-227 (238)
16 3tht_A Alkylated DNA repair pr 95.8 0.036 1.2E-06 51.5 9.4 143 28-199 107-274 (345)
17 3pl0_A Uncharacterized protein 92.6 0.14 4.8E-06 45.7 5.3 76 130-215 163-250 (254)
18 3i3q_A Alpha-ketoglutarate-dep 92.4 0.36 1.2E-05 41.7 7.5 80 116-209 106-200 (211)
19 1w9y_A 1-aminocyclopropane-1-c 92.4 0.24 8.3E-06 45.0 6.7 80 119-213 159-254 (319)
20 1gp6_A Leucoanthocyanidin diox 92.0 0.35 1.2E-05 44.6 7.3 79 119-213 214-308 (356)
21 3on7_A Oxidoreductase, iron/as 90.9 0.35 1.2E-05 43.1 6.0 80 119-213 154-255 (280)
22 3oox_A Putative 2OG-Fe(II) oxy 89.7 0.52 1.8E-05 42.5 6.1 80 119-213 173-272 (312)
23 1odm_A Isopenicillin N synthas 89.6 0.51 1.7E-05 42.9 6.0 70 127-213 208-289 (331)
24 1dcs_A Deacetoxycephalosporin 89.3 0.62 2.1E-05 42.0 6.3 81 119-213 161-268 (311)
25 3rcq_A Aspartyl/asparaginyl be 86.2 1.1 3.9E-05 38.3 5.8 76 117-211 104-182 (197)
26 1r26_A Thioredoxin; redox-acti 74.6 1.1 3.6E-05 34.3 1.3 50 189-238 3-58 (125)
27 2dbn_A Hypothetical protein YB 55.7 9.5 0.00033 36.7 4.1 45 178-238 370-414 (461)
28 1oih_A Putative alkylsulfatase 53.8 50 0.0017 28.7 8.3 32 127-158 102-139 (301)
29 3lwc_A Uncharacterized protein 53.2 23 0.00077 27.0 5.3 75 118-218 43-117 (119)
30 1ilo_A Conserved hypothetical 52.0 4.3 0.00015 27.1 0.8 13 225-237 7-19 (77)
31 2ozj_A Cupin 2, conserved barr 48.4 66 0.0023 23.2 7.1 33 177-210 78-110 (114)
32 1otj_A Alpha-ketoglutarate-dep 46.6 92 0.0032 26.6 8.8 43 117-159 82-131 (283)
33 4i4a_A Similar to unknown prot 45.1 87 0.003 22.9 7.4 41 177-217 74-114 (128)
34 1nx8_A CARC, carbapenem syntha 43.8 10 0.00035 32.6 2.1 32 128-159 96-135 (273)
35 1nho_A Probable thioredoxin; b 42.8 7 0.00024 26.4 0.7 12 226-237 10-21 (85)
36 3pvj_A Alpha-ketoglutarate-dep 40.3 87 0.003 27.2 7.7 32 127-158 91-128 (277)
37 3die_A Thioredoxin, TRX; elect 40.1 8.2 0.00028 27.0 0.8 10 227-236 29-38 (106)
38 2vim_A Thioredoxin, TRX; thior 39.9 8 0.00027 27.0 0.7 11 227-237 29-39 (104)
39 3kp8_A Vkorc1/thioredoxin doma 39.6 8.1 0.00028 28.7 0.7 12 225-236 20-31 (106)
40 1fo5_A Thioredoxin; disulfide 39.3 8.1 0.00028 26.0 0.6 12 226-237 11-22 (85)
41 2voc_A Thioredoxin; electron t 38.2 11 0.00039 27.1 1.3 11 227-237 27-37 (112)
42 1fb6_A Thioredoxin M; electron 37.5 9.2 0.00032 26.7 0.7 11 227-237 28-38 (105)
43 4b29_A Dimethylsulfoniopropion 37.3 76 0.0026 27.4 6.6 33 178-211 174-206 (217)
44 3tco_A Thioredoxin (TRXA-1); d 37.1 9.4 0.00032 26.8 0.7 11 226-236 30-40 (109)
45 2pu9_C TRX-F, thioredoxin F-ty 36.4 9.8 0.00033 27.2 0.7 12 226-237 33-44 (111)
46 3m9j_A Thioredoxin; oxidoreduc 36.3 9.9 0.00034 26.6 0.7 12 226-237 29-40 (105)
47 3uvt_A Thioredoxin domain-cont 36.3 9.9 0.00034 26.8 0.7 11 226-236 30-40 (111)
48 1faa_A Thioredoxin F; electron 36.0 9.9 0.00034 27.8 0.7 12 226-237 46-57 (124)
49 2djj_A PDI, protein disulfide- 35.6 11 0.00037 27.3 0.8 11 227-237 35-45 (121)
50 1nsw_A Thioredoxin, TRX; therm 35.3 11 0.00036 26.5 0.7 11 227-237 27-37 (105)
51 2e0q_A Thioredoxin; electron t 35.2 11 0.00036 26.1 0.7 11 227-237 26-36 (104)
52 1mek_A Protein disulfide isome 35.1 11 0.00038 26.8 0.8 11 227-237 34-44 (120)
53 3d6i_A Monothiol glutaredoxin- 35.0 11 0.00036 27.0 0.6 12 226-237 30-41 (112)
54 2trx_A Thioredoxin; electron t 34.8 11 0.00037 26.6 0.7 11 227-237 30-40 (108)
55 3o2g_A Gamma-butyrobetaine dio 34.6 23 0.00078 32.6 3.0 79 74-156 147-232 (388)
56 3f3q_A Thioredoxin-1; His TAG, 34.2 11 0.00038 27.2 0.7 10 227-236 34-43 (109)
57 1ep7_A Thioredoxin CH1, H-type 34.1 11 0.00038 26.7 0.7 12 226-237 33-44 (112)
58 2kuc_A Putative disulphide-iso 34.0 12 0.0004 27.6 0.8 12 226-237 36-47 (130)
59 4euy_A Uncharacterized protein 33.8 11 0.00039 26.7 0.7 10 227-236 28-37 (105)
60 2xc2_A Thioredoxinn; oxidoredu 33.7 11 0.00039 27.2 0.7 12 226-237 42-53 (117)
61 1dby_A Chloroplast thioredoxin 33.6 12 0.0004 26.4 0.7 12 226-237 28-39 (107)
62 2yzu_A Thioredoxin; redox prot 33.6 12 0.0004 26.2 0.7 11 227-237 28-38 (109)
63 2k8s_A Thioredoxin; dimer, str 33.4 11 0.00038 25.8 0.5 12 226-237 9-20 (80)
64 1gh2_A Thioredoxin-like protei 33.4 12 0.0004 26.6 0.7 12 226-237 30-41 (107)
65 1t00_A Thioredoxin, TRX; redox 33.3 12 0.0004 26.7 0.7 11 227-237 33-43 (112)
66 1xwb_A Thioredoxin; dimerizati 33.3 12 0.0004 26.2 0.7 12 226-237 29-40 (106)
67 1zma_A Bacterocin transport ac 32.8 12 0.00041 27.2 0.7 11 226-236 38-48 (118)
68 1thx_A Thioredoxin, thioredoxi 32.5 13 0.00044 26.4 0.8 10 227-236 35-44 (115)
69 2dml_A Protein disulfide-isome 32.5 15 0.0005 27.0 1.1 11 227-237 45-55 (130)
70 1syr_A Thioredoxin; SGPP, stru 32.2 13 0.00043 26.8 0.7 11 227-237 36-46 (112)
71 2l6c_A Thioredoxin; oxidoreduc 32.1 13 0.00045 26.8 0.8 11 227-237 29-39 (110)
72 3gnj_A Thioredoxin domain prot 31.6 13 0.00045 26.2 0.7 10 227-236 32-41 (111)
73 1x5e_A Thioredoxin domain cont 31.5 13 0.00045 27.3 0.7 11 227-237 32-42 (126)
74 3aps_A DNAJ homolog subfamily 31.4 13 0.00045 26.9 0.7 11 227-237 31-41 (122)
75 3qfa_C Thioredoxin; protein-pr 31.2 13 0.00045 27.2 0.7 12 226-237 40-51 (116)
76 3ul3_B Thioredoxin, thioredoxi 31.2 13 0.00045 27.5 0.7 11 227-237 52-62 (128)
77 1zzo_A RV1677; thioredoxin fol 31.1 13 0.00046 26.9 0.7 10 227-236 35-44 (136)
78 2oe3_A Thioredoxin-3; electron 31.1 13 0.00046 27.2 0.7 11 227-237 40-50 (114)
79 1yhf_A Hypothetical protein SP 30.8 1.4E+02 0.0049 21.1 6.4 30 178-208 81-110 (115)
80 2i4a_A Thioredoxin; acidophIle 30.7 14 0.00047 25.8 0.7 11 227-237 30-40 (107)
81 1w4v_A Thioredoxin, mitochondr 30.6 14 0.00047 27.1 0.7 10 227-236 41-50 (119)
82 2fwh_A Thiol:disulfide interch 30.3 14 0.00048 27.8 0.7 10 226-235 40-49 (134)
83 1xvw_A Hypothetical protein RV 30.2 22 0.00077 27.0 1.9 22 200-235 34-55 (160)
84 2f51_A Thioredoxin; electron t 30.1 14 0.00049 27.1 0.7 11 226-236 32-42 (118)
85 2l57_A Uncharacterized protein 30.1 14 0.00049 27.1 0.7 11 227-237 36-46 (126)
86 3fk8_A Disulphide isomerase; A 30.0 14 0.00049 27.3 0.7 12 226-237 38-49 (133)
87 1zvf_A 3-hydroxyanthranilate 3 30.0 2.3E+02 0.0078 23.7 8.1 53 177-236 82-134 (176)
88 2j23_A Thioredoxin; immune pro 29.8 15 0.00052 27.0 0.8 11 227-237 43-53 (121)
89 1xfl_A Thioredoxin H1; AT3G510 29.7 15 0.0005 27.4 0.7 12 226-237 47-58 (124)
90 1lu4_A Soluble secreted antige 29.6 15 0.0005 26.8 0.7 10 227-236 34-43 (136)
91 1yfu_A 3-hydroxyanthranilate-3 29.6 2.4E+02 0.0083 23.4 8.5 92 118-235 36-131 (174)
92 3hxs_A Thioredoxin, TRXP; elec 29.4 16 0.00053 27.4 0.8 10 227-236 61-70 (141)
93 2dj3_A Protein disulfide-isome 29.4 16 0.00053 27.0 0.8 11 227-237 35-45 (133)
94 3eur_A Uncharacterized protein 29.3 13 0.00044 27.9 0.3 9 227-235 41-49 (142)
95 2yj7_A LPBCA thioredoxin; oxid 35.4 11 0.00039 26.0 0.0 11 227-237 29-39 (106)
96 1x5d_A Protein disulfide-isome 29.2 15 0.00051 26.9 0.7 11 227-237 35-45 (133)
97 2l5l_A Thioredoxin; structural 29.1 15 0.00051 27.6 0.7 11 227-237 48-58 (136)
98 2e7p_A Glutaredoxin; thioredox 29.0 15 0.0005 26.7 0.5 11 227-237 28-38 (116)
99 1ti3_A Thioredoxin H, PTTRXH1; 29.0 15 0.00053 25.9 0.7 11 226-236 35-45 (113)
100 3ewl_A Uncharacterized conserv 28.9 13 0.00046 27.6 0.3 9 227-235 37-45 (142)
101 2lja_A Putative thiol-disulfid 28.8 19 0.00064 27.0 1.2 11 227-237 40-50 (152)
102 2vlu_A Thioredoxin, thioredoxi 28.8 16 0.00053 26.5 0.7 12 226-237 43-54 (122)
103 3h79_A Thioredoxin-like protei 28.7 16 0.00053 27.0 0.7 11 227-237 43-53 (127)
104 3r1j_A Alpha-ketoglutarate-dep 28.3 1.5E+02 0.0052 26.1 7.3 31 128-158 98-134 (301)
105 2vm1_A Thioredoxin, thioredoxi 28.3 16 0.00055 26.1 0.7 12 226-237 37-48 (118)
106 3or5_A Thiol:disulfide interch 28.1 16 0.00055 27.7 0.7 11 227-237 44-54 (165)
107 3erw_A Sporulation thiol-disul 28.1 16 0.00056 26.8 0.7 10 227-236 44-53 (145)
108 4evm_A Thioredoxin family prot 28.0 16 0.00056 26.2 0.7 9 227-235 32-40 (138)
109 3iv4_A Putative oxidoreductase 27.9 14 0.00047 28.7 0.2 13 226-238 33-45 (112)
110 3zzx_A Thioredoxin; oxidoreduc 27.9 14 0.00047 27.2 0.2 10 226-235 29-38 (105)
111 3emx_A Thioredoxin; structural 27.7 16 0.00056 27.5 0.6 11 226-236 40-50 (135)
112 2dj0_A Thioredoxin-related tra 27.3 18 0.00062 27.1 0.9 12 226-237 35-46 (137)
113 1kng_A Thiol:disulfide interch 27.3 17 0.00058 27.3 0.7 9 227-235 52-60 (156)
114 2dj1_A Protein disulfide-isome 27.2 17 0.00059 27.0 0.7 11 227-237 44-54 (140)
115 2ju5_A Thioredoxin disulfide i 27.1 17 0.00058 28.2 0.7 12 226-237 57-68 (154)
116 2b5x_A YKUV protein, TRXY; thi 27.1 17 0.00059 26.7 0.7 9 227-235 39-47 (148)
117 3hcz_A Possible thiol-disulfid 27.1 18 0.00063 26.7 0.8 11 227-237 41-51 (148)
118 2o8v_B Thioredoxin 1; disulfid 26.9 17 0.0006 27.2 0.7 12 226-237 49-60 (128)
119 1ds1_A Clavaminate synthase 1; 26.9 31 0.001 30.5 2.4 33 128-160 139-178 (324)
120 2i1u_A Thioredoxin, TRX, MPT46 26.6 18 0.00061 26.0 0.7 11 227-237 40-50 (121)
121 1wmj_A Thioredoxin H-type; str 26.6 16 0.00056 26.6 0.5 12 226-237 45-56 (130)
122 3uws_A Hypothetical protein; c 26.6 23 0.00079 27.8 1.3 26 192-217 93-118 (126)
123 3d22_A TRXH4, thioredoxin H-ty 26.6 18 0.00061 27.0 0.7 12 226-237 55-66 (139)
124 3cxg_A Putative thioredoxin; m 26.5 18 0.00061 27.3 0.7 11 226-236 49-59 (133)
125 3eyt_A Uncharacterized protein 26.5 15 0.00052 27.8 0.3 9 227-235 38-46 (158)
126 1z6n_A Hypothetical protein PA 26.5 15 0.00053 29.6 0.3 11 226-236 63-73 (167)
127 3fkf_A Thiol-disulfide oxidore 26.4 19 0.00064 26.6 0.8 10 227-236 43-52 (148)
128 1ego_A Glutaredoxin; electron 26.3 18 0.00062 24.5 0.6 11 227-237 9-19 (85)
129 3raz_A Thioredoxin-related pro 26.1 18 0.00063 27.3 0.7 10 227-236 34-43 (151)
130 3gix_A Thioredoxin-like protei 26.1 18 0.00062 28.1 0.7 12 226-237 32-43 (149)
131 3lor_A Thiol-disulfide isomera 25.6 16 0.00056 27.6 0.3 9 227-235 40-48 (160)
132 3hz4_A Thioredoxin; NYSGXRC, P 25.6 19 0.00065 27.2 0.7 10 227-236 34-43 (140)
133 1i5g_A Tryparedoxin II; electr 25.4 19 0.00066 26.8 0.7 10 227-236 38-47 (144)
134 2lus_A Thioredoxion; CR-Trp16, 31.1 15 0.00051 27.1 0.0 10 227-236 36-45 (143)
135 3f9u_A Putative exported cytoc 25.2 19 0.00066 28.0 0.7 10 226-235 56-65 (172)
136 2og5_A Putative oxygenase; non 24.8 31 0.0011 31.1 2.1 30 128-157 174-209 (357)
137 3rns_A Cupin 2 conserved barre 24.6 1.7E+02 0.0059 24.2 6.7 33 177-209 193-225 (227)
138 2wbq_A L-arginine beta-hydroxy 24.3 44 0.0015 29.9 3.0 32 128-160 163-200 (358)
139 1sen_A Thioredoxin-like protei 24.1 21 0.00071 28.2 0.7 13 225-237 54-66 (164)
140 4fo5_A Thioredoxin-like protei 24.1 18 0.00062 27.0 0.3 9 227-235 42-50 (143)
141 1o73_A Tryparedoxin; electron 24.1 21 0.00073 26.5 0.7 10 227-236 38-47 (144)
142 2h30_A Thioredoxin, peptide me 23.8 22 0.00074 27.0 0.7 10 227-236 48-57 (164)
143 3ha9_A Uncharacterized thiored 23.8 23 0.00077 27.1 0.8 10 227-236 47-56 (165)
144 3gl3_A Putative thiol:disulfid 23.6 23 0.00078 26.5 0.8 10 227-236 38-47 (152)
145 2lst_A Thioredoxin; structural 29.3 17 0.00058 26.7 0.0 11 226-236 28-38 (130)
146 2q4a_A Clavaminate synthase-li 23.2 34 0.0012 30.2 2.0 32 128-159 115-152 (330)
147 2v1m_A Glutathione peroxidase; 23.1 20 0.0007 27.3 0.4 9 227-235 41-49 (169)
148 2l5o_A Putative thioredoxin; s 23.0 24 0.00082 26.4 0.8 9 227-235 38-46 (153)
149 2f9s_A Thiol-disulfide oxidore 23.0 23 0.00078 26.6 0.7 10 227-236 36-45 (151)
150 2lrn_A Thiol:disulfide interch 22.8 24 0.00083 26.6 0.8 9 227-235 39-47 (152)
151 2wz9_A Glutaredoxin-3; protein 22.7 23 0.00079 27.2 0.7 12 226-237 41-52 (153)
152 1o8x_A Tryparedoxin, TRYX, TXN 22.4 24 0.00082 26.4 0.7 9 227-235 38-46 (146)
153 4g2e_A Peroxiredoxin; redox pr 22.3 33 0.0011 26.7 1.5 9 227-235 41-49 (157)
154 2opk_A Hypothetical protein; p 22.3 60 0.0021 23.9 2.9 25 177-201 75-99 (112)
155 2dbc_A PDCL2, unnamed protein 22.3 24 0.00083 26.7 0.7 12 226-237 39-50 (135)
156 3kcm_A Thioredoxin family prot 22.2 24 0.00083 26.4 0.7 10 227-236 38-47 (154)
157 1un2_A DSBA, thiol-disulfide i 21.4 22 0.00074 29.5 0.2 11 225-235 121-131 (197)
158 3ph9_A Anterior gradient prote 21.3 26 0.00089 27.9 0.7 12 226-237 53-64 (151)
159 2lqo_A Putative glutaredoxin R 21.1 27 0.00092 25.6 0.7 13 227-239 12-24 (92)
160 2arc_A ARAC, arabinose operon 21.1 91 0.0031 23.4 3.9 36 177-212 58-95 (164)
161 1qgv_A Spliceosomal protein U5 21.0 26 0.0009 26.9 0.7 12 226-237 32-43 (142)
162 2b1k_A Thiol:disulfide interch 20.9 27 0.00091 26.8 0.7 10 227-236 61-70 (168)
163 2fgx_A Putative thioredoxin; N 20.8 24 0.00083 26.7 0.4 11 227-237 38-48 (107)
164 3ia1_A THIO-disulfide isomeras 20.6 27 0.00093 26.2 0.7 10 227-236 40-49 (154)
165 3qou_A Protein YBBN; thioredox 20.5 25 0.00085 29.8 0.4 10 227-236 36-45 (287)
166 3eat_X Pyoverdine biosynthesis 20.4 57 0.0019 28.6 2.8 31 129-159 108-146 (293)
167 3kij_A Probable glutathione pe 20.4 25 0.00086 27.7 0.4 9 227-235 48-56 (180)
168 3q6o_A Sulfhydryl oxidase 1; p 20.2 24 0.00081 29.4 0.2 11 226-236 39-49 (244)
169 2p5q_A Glutathione peroxidase 20.0 26 0.00088 26.7 0.4 9 227-235 42-50 (170)
No 1
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=99.82 E-value=1.1e-19 Score=162.92 Aligned_cols=163 Identities=17% Similarity=0.306 Sum_probs=110.4
Q ss_pred CeEEEec-CCCHHHHHHHHHHHHhcccccccCCc-cccccCCCCccceeecccchh-HHHHHHHHHhhhhhhhhhCCCcC
Q 024926 32 PGIYTFE-MLQPRFCEMLLSEVENFERWVHDTRF-RIMRPNTMNKFGAVLDDFGLE-TMLDKLMNDFIRPISKVFFPEVG 108 (260)
Q Consensus 32 p~Vy~fp-vft~~fC~~LI~e~e~f~~w~~~s~~-~~~rpn~mn~ygvvldd~gl~-~~~~~l~~~~l~Pl~~~lfp~~~ 108 (260)
+.++.+| +||+++|++||+.++.- .|..+... ........||..+..++. +. .+++. +...+. .- |.+.
T Consensus 19 ~~i~~i~dvLs~~Ec~~li~~~e~~-~~~dg~~t~g~~~~~vr~n~~l~~d~~-~~~~l~~~-i~~~l~----~~-~~f~ 90 (243)
T 3dkq_A 19 GMLIEIPNVFSKQEVSHLREQLDAR-RWIDGNQTSGAMATTRKRNQQLDKDDP-VAVALGQQ-IMDRLL----AH-PQFV 90 (243)
T ss_dssp TTBEEECCSSCHHHHHHHHHHHHTS-CCEEECCCSSBSSCCCEEEEECCTTCH-HHHHHHHH-HHHHHH----TC-HHHH
T ss_pred CCEEEECCCCCHHHHHHHHHHHhhC-CCccCcccCCCccccceeeeEECCCCH-HHHHHHHH-HHHHHc----cC-cchh
Confidence 5677775 99999999999999863 34332211 111123455555553432 32 22222 222221 11 0011
Q ss_pred CCCC--CccceeEEEEcCCCCCCccccccCC-----------eeeEEEeeCC--ceeccceEEecccccccccccccccc
Q 024926 109 GSTL--DSHHGFVVEYGMDRDVELGFHVDDS-----------EVTLNVCLGR--EFSGGELFFRGVRCDKHVNTETQSEE 173 (260)
Q Consensus 109 ~~~L--ds~~~FvvrY~~~~d~~l~~H~D~S-----------~~TlnV~L~~--dfeGG~l~F~~~~~~~~v~~~~~~~~ 173 (260)
..+| ......+.+|.+|+ ++++|+|.+ .+|+.++||+ +|+||+|.|......
T Consensus 91 ~~~L~~~~e~~~~~rY~~G~--~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~~~~----------- 157 (243)
T 3dkq_A 91 SAALPLQFYPPLFNRYQGGE--TFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDTYGQ----------- 157 (243)
T ss_dssp HHHCEEEEEEEEEEEECTTC--EEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEETTEE-----------
T ss_pred hcccccccccceEEEECCCC--eeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeCCCc-----------
Confidence 1112 12235689999986 899999963 5899999998 999999999964321
Q ss_pred cceecCCCceEEEecCCCCcCccccCccceeEEEeeccchhhhh
Q 024926 174 ILDYSHVPGYAVLHRGRHRHGARATTSGSRVNLLVWCRSSVFRE 217 (260)
Q Consensus 174 ~~~~~~~~G~avlh~g~~~H~~~pVTsG~Ry~Lv~w~rss~~R~ 217 (260)
..++|++|.+|+|++..+|+|.|||+|.||+++.|++|. +|+
T Consensus 158 -~~V~P~~G~~v~F~s~~lH~v~pV~~G~R~~~~~Wi~s~-vr~ 199 (243)
T 3dkq_A 158 -QSIKLSAGSLVLYPSSSLHQVTPVLSGERTAAFMWLQSM-VRD 199 (243)
T ss_dssp -EEECCCTTCEEEEETTSEEEECCEEEECEEEEEEEEEES-CCC
T ss_pred -EEEecCCCEEEEECCCCeEcCccccccCEEEEEEehhhc-cCC
Confidence 246899999999999999999999999999999999987 565
No 2
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=99.79 E-value=8.6e-19 Score=153.38 Aligned_cols=175 Identities=15% Similarity=0.212 Sum_probs=112.6
Q ss_pred CCeEEEec-CCCHHHHHHHHHHHHh-ccc--ccccCCccccccCCCCccceeecccchhHHHHHHHHHhhhhhhhhhCCC
Q 024926 31 IPGIYTFE-MLQPRFCEMLLSEVEN-FER--WVHDTRFRIMRPNTMNKFGAVLDDFGLETMLDKLMNDFIRPISKVFFPE 106 (260)
Q Consensus 31 ~p~Vy~fp-vft~~fC~~LI~e~e~-f~~--w~~~s~~~~~rpn~mn~ygvvldd~gl~~~~~~l~~~~l~Pl~~~lfp~ 106 (260)
.|.|+.++ +||+++|+.||+.++. +.. ++.+..-.....+.+++..+-|++- -+.....+. +.|..++ -.|
T Consensus 19 ~P~i~~~~~fLs~~Ec~~li~~~~~~~~~s~v~~~~~g~~~~~~~R~s~~~~l~~~-~~~~~~~i~-~ri~~~~--gl~- 93 (224)
T 2jig_A 19 SPRAFLLKNFLSDEECDYIVEKARPKMVKSSVVDNESGKSVDSEIRTSTGTWFAKG-EDSVISKIE-KRVAQVT--MIP- 93 (224)
T ss_dssp TTTEEEETTCSCHHHHHHHHHHHGGGCEECEEEETTTTEEEECSSBCSEEEECCTT-CSHHHHHHH-HHHHHHH--TCC-
T ss_pred CCCEEEEcccCCHHHHHHHHHHhhccCeeeeeecCCCCcccccCCEEEeeeEecCC-CCHHHHHHH-HHHHHHh--CCC-
Confidence 57888885 9999999999999985 322 2221100111223344455555532 122222222 2333322 112
Q ss_pred cCCCCCCccceeEEEEcCCCCCCccccccCC--------------eeeEEEeeCCceeccceEEeccccccc--cccccc
Q 024926 107 VGGSTLDSHHGFVVEYGMDRDVELGFHVDDS--------------EVTLNVCLGREFSGGELFFRGVRCDKH--VNTETQ 170 (260)
Q Consensus 107 ~~~~~Lds~~~FvvrY~~~~d~~l~~H~D~S--------------~~TlnV~L~~dfeGG~l~F~~~~~~~~--v~~~~~ 170 (260)
+ .. .....+++|.+++ ++.+|+|.. .+|+.++||+..+||+|.|........ .-++.
T Consensus 94 ~---~~-~e~~qv~rY~~G~--~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~~~~~~~~~~c- 166 (224)
T 2jig_A 94 L---EN-HEGLQVLHYHDGQ--KYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVEEGGETVLPNAEQKVTGDGWSEC- 166 (224)
T ss_dssp G---GG-BCCCEEEEEETTC--CEEEECCSSCCTTSSSCCCCSCEEEEEEEECSCCSEECCEEETTSSSCCCSTTSCTT-
T ss_pred c---cc-ccceEEEecCCCc--cccCcccCCCCccccccccCCCeEEEEEEEecCCCCCCceeCCCccccccccccccc-
Confidence 1 11 1123589999986 899999942 389999999999999999986531000 00000
Q ss_pred ccccceecCCCceEEEecC---------CCCcCccccCccceeEEEeeccchhhhh
Q 024926 171 SEEILDYSHVPGYAVLHRG---------RHRHGARATTSGSRVNLLVWCRSSVFRE 217 (260)
Q Consensus 171 ~~~~~~~~~~~G~avlh~g---------~~~H~~~pVTsG~Ry~Lv~w~rss~~R~ 217 (260)
.+..+.++|++|.||+|+. +.+|+|.||++|+||++..|+++..||-
T Consensus 167 ~~~~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~~~~~~ 222 (224)
T 2jig_A 167 AKRGLAVKPIKGDALMFYSLKPDGSNDPASLHGSCPTLKGDKWSATKWIHVAPIGG 222 (224)
T ss_dssp GGGSEEECCCTTCEEEEESBCTTSCBCGGGCEEECCEEESEEEEEEEEEESSCCCC
T ss_pred ccCceEEecccCcEEEEEeeCCCCCCCCCCcccCCccccceEEEEEEeEEcCCcCC
Confidence 0123578999999999987 7999999999999999999999987763
No 3
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=99.79 E-value=7.3e-19 Score=154.90 Aligned_cols=154 Identities=23% Similarity=0.332 Sum_probs=108.1
Q ss_pred CCeEEEec-CCCHHHHHHHHHHHHh-cccccccCCcc--ccccCCCCccceeecccchhHHHHHHHHHhhhhhhhhhCCC
Q 024926 31 IPGIYTFE-MLQPRFCEMLLSEVEN-FERWVHDTRFR--IMRPNTMNKFGAVLDDFGLETMLDKLMNDFIRPISKVFFPE 106 (260)
Q Consensus 31 ~p~Vy~fp-vft~~fC~~LI~e~e~-f~~w~~~s~~~--~~rpn~mn~ygvvldd~gl~~~~~~l~~~~l~Pl~~~lfp~ 106 (260)
.|.|+.++ +||+++|+.||+..+. +.. +... ......++..++-|++ +..... +.+.+..++. +|
T Consensus 38 ~P~i~~~~~fLs~~Ec~~Li~~a~~~l~~----s~v~~~~~~~~~RtS~~~wl~~---~~~v~~-i~~Ri~~~~g--l~- 106 (216)
T 3itq_A 38 EPLIVVLGNVLSDEECDELIELSKSKLAR----SKVGSSRDVNDIRTSSGAFLDD---NELTAK-IEKRISSIMN--VP- 106 (216)
T ss_dssp TTTEEEEESCSCHHHHHHHHHHHHHHHC------------CCCCGGGTTCEECCC---CHHHHH-HHHHHHHHHT--SC-
T ss_pred CCCEEEECCcCCHHHHHHHHHHhhccccc----ceeccCCccCCcEeeeeEEeCC---cHHHHH-HHHHHHHhcC--ce-
Confidence 68899986 9999999999999885 433 1110 0112233344566666 222222 2223333321 11
Q ss_pred cCCCCCCccceeEEEEcCCCCCCccccccCC-----------eeeEEEeeCCceeccceEEecccccccccccccccccc
Q 024926 107 VGGSTLDSHHGFVVEYGMDRDVELGFHVDDS-----------EVTLNVCLGREFSGGELFFRGVRCDKHVNTETQSEEIL 175 (260)
Q Consensus 107 ~~~~~Lds~~~FvvrY~~~~d~~l~~H~D~S-----------~~TlnV~L~~dfeGG~l~F~~~~~~~~v~~~~~~~~~~ 175 (260)
.. ..-...+++|.+++ ++.+|+|.. .+|+.++||+.++||+|.|...+.
T Consensus 107 ~~----~~E~lqv~~Y~~G~--~y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~-------------- 166 (216)
T 3itq_A 107 AS----HGEGLHILNYEVDQ--QYKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGETFFPKLNL-------------- 166 (216)
T ss_dssp GG----GBCCCEEEEECBTC--CEEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCEEETTTTE--------------
T ss_pred ec----cccceeEEEeCCCC--ccccccCCCcCCCcccCCceEEEEEEecccCCcCceeEecCCCC--------------
Confidence 10 11134589999986 899999954 389999999999999999986432
Q ss_pred eecCCCceEEEecC---------CCCcCccccCccceeEEEeeccchhh
Q 024926 176 DYSHVPGYAVLHRG---------RHRHGARATTSGSRVNLLVWCRSSVF 215 (260)
Q Consensus 176 ~~~~~~G~avlh~g---------~~~H~~~pVTsG~Ry~Lv~w~rss~~ 215 (260)
.++|++|.||+|++ +.+|+|.||++|+||+++.|+|...|
T Consensus 167 ~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~G~K~v~~~W~~~~~~ 215 (216)
T 3itq_A 167 SVHPRKGMAVYFEYFYQDQSLNELTLHGGAPVTKGEKWIATQWVRRGTY 215 (216)
T ss_dssp EECCCTTCEEEEECCCSSHHHHHTTCEEECCEEESCEEEEEEEEESSCC
T ss_pred EEecCCCeEEEEeccCCCCCCCCccccccceeccccEEEEEeeEecCCc
Confidence 35899999999998 79999999999999999999998765
No 4
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=99.48 E-value=8.3e-13 Score=118.04 Aligned_cols=169 Identities=19% Similarity=0.240 Sum_probs=106.8
Q ss_pred CeEEEec-CCCHHHHHHHHHHHHhcc---cccccCCccccccCC-----CCcccee-eccc--chhH--HHHHHHHHhhh
Q 024926 32 PGIYTFE-MLQPRFCEMLLSEVENFE---RWVHDTRFRIMRPNT-----MNKFGAV-LDDF--GLET--MLDKLMNDFIR 97 (260)
Q Consensus 32 p~Vy~fp-vft~~fC~~LI~e~e~f~---~w~~~s~~~~~rpn~-----mn~ygvv-ldd~--gl~~--~~~~l~~~~l~ 97 (260)
+++++++ +|++++|++|+++++... .+.. ..+.+.+. .++..+. ++.- .... .+...++..+.
T Consensus 26 ~g~~Vid~fLs~ee~~~L~~~~~~~~~~g~~~~---a~i~~~~~~~~~~iR~d~i~wl~~~~~~~~~~~~l~~~i~~l~~ 102 (247)
T 2hbt_A 26 HGICVVDDFLGKETGQQIGDEVRALHDTGKFTD---GQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIR 102 (247)
T ss_dssp TSEEEESSSSCHHHHHHHHHHHHHHHHTTCSCS---CCEEECCSSSTTCEECCEEEEECSCSTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEECCCCCHHHHHHHHHHHHhhhhcCCccc---cccccccccccccccccceeeecccccchhHHHHHHHHHHHHHH
Confidence 4677775 999999999999999732 1111 11111110 1111222 3321 1221 23444544443
Q ss_pred hhhhhhCCCcCCCCCC-ccceeEEEEcCCCCCCccccccCC-----eeeEEEeeCCc----eeccceEEecccccccccc
Q 024926 98 PISKVFFPEVGGSTLD-SHHGFVVEYGMDRDVELGFHVDDS-----EVTLNVCLGRE----FSGGELFFRGVRCDKHVNT 167 (260)
Q Consensus 98 Pl~~~lfp~~~~~~Ld-s~~~FvvrY~~~~d~~l~~H~D~S-----~~TlnV~L~~d----feGG~l~F~~~~~~~~v~~ 167 (260)
-+.+. .+...++ .....+.+|.+. +.++.+|.|+. .+|+.++||++ +.||+|.|.....
T Consensus 103 ~ln~~----lGl~~i~~~~e~~~~~Y~~~-G~~y~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~------ 171 (247)
T 2hbt_A 103 HCNGK----LGSYKINGRTKAMVACYPGN-GTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGK------ 171 (247)
T ss_dssp HTTTT----STTCCEEEECCEEEEEECSS-SCCEEEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTC------
T ss_pred HHhhh----cCcccccccceEEEEEecCC-CCcccccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCC------
Confidence 33332 1111111 123457899862 34899999973 59999999985 5599999875321
Q ss_pred cccccccceecCCCceEEEecCC--CCcCccccCccceeEEEeeccchhhhhhH
Q 024926 168 ETQSEEILDYSHVPGYAVLHRGR--HRHGARATTSGSRVNLLVWCRSSVFRELK 219 (260)
Q Consensus 168 ~~~~~~~~~~~~~~G~avlh~g~--~~H~~~pVTsG~Ry~Lv~w~rss~~R~~~ 219 (260)
+....+.|+.|++|+|++. ..|+++| +.|.||++..|++....|...
T Consensus 172 ----~~~~~v~P~~grlv~F~s~~~~~H~V~p-~~~~R~sit~W~~~~~~~~~a 220 (247)
T 2hbt_A 172 ----AQFADIEPKFDRLLFFWSDRRNPHEVQP-AYATRYAITVWYFDADERARA 220 (247)
T ss_dssp ----SSCEEECCBTTEEEEEECSTTCCEEECC-BSSCEEEEEEEEEEHHHHHHH
T ss_pred ----CceEEEEcCCCEEEEEecCCCceeeecc-CCCEEEEEEEEEcCCchhhhh
Confidence 1234678999999999986 7999999 679999999999999888644
No 5
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=98.45 E-value=1.6e-06 Score=86.17 Aligned_cols=197 Identities=15% Similarity=0.135 Sum_probs=118.7
Q ss_pred CCChhHHHHcccccHHHHHhhhcccCCeEEEecCCCHHHHHHHHHHHHhcccccc-cCCcc-ccccCCCCc-cceeeccc
Q 024926 6 VLVPAFVKAVRDNTEASFRSIMAEPIPGIYTFEMLQPRFCEMLLSEVENFERWVH-DTRFR-IMRPNTMNK-FGAVLDDF 82 (260)
Q Consensus 6 ~~~p~f~~~i~~~~~~~~~~~~~e~~p~Vy~fpvft~~fC~~LI~e~e~f~~w~~-~s~~~-~~rpn~mn~-ygvvldd~ 82 (260)
+|.++|+++++.... -.+|.|-+..-.+|.++.-+++.+++..--.|.. ..++- +.......| .++.-+++
T Consensus 15 ~~~~~~~~~lk~~y~------~s~PFpH~VIdnfl~d~lle~V~~Efp~~i~f~~KetDlYk~~QsgdLanl~~l~~e~l 88 (633)
T 3kt7_A 15 IWDKTFQDGLKKEIE------DSQPYNWGTIHELVNDDLLRAVRKEIETEIHFTKKETDIYRVNQSGDLANLSGLDWDDL 88 (633)
T ss_dssp GGCHHHHHHHHHHHH------TCSSSCCEEESSCBCHHHHHHHHHHHHHHCCCEEEECSSEEEEECCCTTCTTSCCTTCC
T ss_pred hcCHHHHHHHHhhhh------cCCCcceEEECCCCCHHHHHHHHHHhhhccCcccccccccceeccccccccccCChhhh
Confidence 455556555554333 2578999888899999999999999873222321 11211 111122211 12222333
Q ss_pred chhHHHHHHHHHhhhhhhhhhCCCcCCC-CCC--ccceeEEEEcCCCCCCccccccCC---eeeEEEeeCC-c-----ee
Q 024926 83 GLETMLDKLMNDFIRPISKVFFPEVGGS-TLD--SHHGFVVEYGMDRDVELGFHVDDS---EVTLNVCLGR-E-----FS 150 (260)
Q Consensus 83 gl~~~~~~l~~~~l~Pl~~~lfp~~~~~-~Ld--s~~~FvvrY~~~~d~~l~~H~D~S---~~TlnV~L~~-d-----fe 150 (260)
....-|..|+.....+-.+.+.-++.|- .|. .-...+.+|.+|. +|..|.|.. .+|+.++||+ + -.
T Consensus 89 ~~lp~l~~Lr~~L~S~~Fr~~Ls~iTGi~~Lsg~~~D~~~a~Y~~G~--fL~~H~D~~~~RrvS~VLYLN~pd~~W~~e~ 166 (633)
T 3kt7_A 89 SRLPNLFKLRQILYSKQYRDFFGYVTKAGKLSGSKTDMSINTYTKGC--HLLTHDDVIGSRRISFILYLPDPDRKWKSHY 166 (633)
T ss_dssp TTCHHHHHHHHHHTSHHHHHHHHHHHTCCCCCSSCCCEEEEEECTTC--EEEEECCCCTTEEEEEEEECSCTTSCCCGGG
T ss_pred ccChHHHHHHHHHhcHHHHHHHHHHhCCcccCCCceeEEEEEeCCCC--eeeecCCCCCCeEEEEEEEcCCCCCCCCccC
Confidence 3333444444433333333333222221 221 1123467898775 999999964 5999999997 4 56
Q ss_pred ccceEEecccccccccccccccccceecCCCceEEEecC---CCCcCccccC-ccceeEEEeeccchh
Q 024926 151 GGELFFRGVRCDKHVNTETQSEEILDYSHVPGYAVLHRG---RHRHGARATT-SGSRVNLLVWCRSSV 214 (260)
Q Consensus 151 GG~l~F~~~~~~~~v~~~~~~~~~~~~~~~~G~avlh~g---~~~H~~~pVT-sG~Ry~Lv~w~rss~ 214 (260)
||+|.+....... . ...+....+.|..|+.|+|.. ...|++.+|+ ...|+++.+|.+.+.
T Consensus 167 GGeL~Lyd~d~~~---~-P~~d~~~~I~P~fNrLV~F~vsp~~S~H~V~eV~~~~~RlSItGWF~~p~ 230 (633)
T 3kt7_A 167 GGGLRLFPSILPN---V-PHSDPSAKLVPQFNQIAFFKVLPGFSFHDXEEVKVDKHRLSIQGWYHIPQ 230 (633)
T ss_dssp BCCEEECCEEETT---E-ECSSCSEEECCCTTEEEEEECCTTTCCEEECCBCSSCCEEEEEEEEECCC
T ss_pred CceEEEecCCCcC---C-CCCCceEEEecCCCeEEEEEcCCCCCcCCCCccCCCCCEEEEEEEeccCC
Confidence 9999998643210 0 001223467899999999985 4999999998 566999999999874
No 6
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=98.16 E-value=1.8e-05 Score=69.04 Aligned_cols=94 Identities=11% Similarity=0.056 Sum_probs=68.0
Q ss_pred cceeEEEEcCCCCCCcccccc-CCeeeEEEeeCCceeccceEEecccccccccc-----ccc--ccccceecCCCceEEE
Q 024926 115 HHGFVVEYGMDRDVELGFHVD-DSEVTLNVCLGREFSGGELFFRGVRCDKHVNT-----ETQ--SEEILDYSHVPGYAVL 186 (260)
Q Consensus 115 ~~~FvvrY~~~~d~~l~~H~D-~S~~TlnV~L~~dfeGG~l~F~~~~~~~~v~~-----~~~--~~~~~~~~~~~G~avl 186 (260)
....++.|.++. ....|.| ++.+|-+++|+..-.||+|.|..-+....+.. +.. ......+.|++|..||
T Consensus 103 ~~~W~~~~~~G~--~~~~H~H~~~~lSgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~lvl 180 (216)
T 2rg4_A 103 EDIWINILPEGG--VHGSHIHPHSVISGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLL 180 (216)
T ss_dssp EEEEEEEECTTC--CEEEECCTTCSEEEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEEEE
T ss_pred eeEEEEEcCCCC--cccCccCCCCeEEEEEEEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEecCCCCeEEE
Confidence 356788998875 8899999 47899999998655799999986432100000 000 0122367999999999
Q ss_pred ecCCCCcCccccCc-cceeEEEeec
Q 024926 187 HRGRHRHGARATTS-GSRVNLLVWC 210 (260)
Q Consensus 187 h~g~~~H~~~pVTs-G~Ry~Lv~w~ 210 (260)
||+.+.|++.|..+ +.|+.+-.-+
T Consensus 181 FpS~l~H~V~p~~~~~~RiSIsFN~ 205 (216)
T 2rg4_A 181 WESWLRHEVPMNMAEEDRISVSFNY 205 (216)
T ss_dssp EETTSCEEECCCCSSSCEEEEEEEE
T ss_pred ECCCCEEeccCCCCCCCEEEEEEEe
Confidence 99999999999886 6788875543
No 7
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=97.92 E-value=0.00013 Score=64.40 Aligned_cols=88 Identities=18% Similarity=0.161 Sum_probs=59.7
Q ss_pred CCCccccccCC-------eeeEEEeeCC-ceeccceEEecccccccccc--------------------c-cccccccee
Q 024926 127 DVELGFHVDDS-------EVTLNVCLGR-EFSGGELFFRGVRCDKHVNT--------------------E-TQSEEILDY 177 (260)
Q Consensus 127 d~~l~~H~D~S-------~~TlnV~L~~-dfeGG~l~F~~~~~~~~v~~--------------------~-~~~~~~~~~ 177 (260)
+....||.|.. .+|+.|+|.+ .=+.|.|.|....-...... + .........
T Consensus 134 g~~~~wHqD~~~~~~~~~~v~~wiaL~d~~~enG~l~vvPGSH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 213 (288)
T 2rdq_A 134 HYLTPFHQDGFYIGPNQDFRTFWIPLIRTTRESGGVALADGSHRRGKRDHVLNESFRRFGHPVRGIPPTEVSEDEHLLHS 213 (288)
T ss_dssp TTSCCSBCHHHHSCSCCCCEEEEEESSCCCTTTCEEEEETTTTSSCCCCCEEEEEEEETTEEEEECCGGGSCTTSCEECC
T ss_pred CCCcCccccccccCCCCCeEEEEEECCCCCccCCcEEEEeCCccccccccccchhhhccCcccccCCCccccccCceeec
Confidence 45789999963 5788999975 34567777753211000000 0 011223456
Q ss_pred cCCCceEEEecCCCCcCccccCcc----ceeEEEeeccchh
Q 024926 178 SHVPGYAVLHRGRHRHGARATTSG----SRVNLLVWCRSSV 214 (260)
Q Consensus 178 ~~~~G~avlh~g~~~H~~~pVTsG----~Ry~Lv~w~rss~ 214 (260)
..++|++|+|.+..+|++.|-++. .|++++.|.....
T Consensus 214 ~~~aGdv~lf~~~~~H~s~~N~s~~~R~~R~s~~~~~~~~~ 254 (288)
T 2rdq_A 214 PMEPGDILLFHAHMCHKSIPNLSKDPRLMRMSMDTRVQPAK 254 (288)
T ss_dssp CCCTTCEEEEETTCCEEEECCCCCTTCCCEEEEEEEEEETT
T ss_pred ccCCCCEEEEeCCceecCCCCCCCCccceEEEEEEEEecCc
Confidence 779999999999999999998886 3799999988763
No 8
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=97.76 E-value=0.00037 Score=62.43 Aligned_cols=84 Identities=14% Similarity=0.113 Sum_probs=55.7
Q ss_pred ccccccCC---------eeeEEEeeCC-ceeccceEEeccccccccc------------------cc-ccccccceecCC
Q 024926 130 LGFHVDDS---------EVTLNVCLGR-EFSGGELFFRGVRCDKHVN------------------TE-TQSEEILDYSHV 180 (260)
Q Consensus 130 l~~H~D~S---------~~TlnV~L~~-dfeGG~l~F~~~~~~~~v~------------------~~-~~~~~~~~~~~~ 180 (260)
..||.|.+ .+|+.|+|.+ .=+.|.|.|....-..... .+ ....+......+
T Consensus 142 ~~wHqD~~~~~~~p~~~~v~~wiaL~D~~~enG~l~~vPGSH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 221 (308)
T 2a1x_A 142 HPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLPGTHKGSLKPHDYPKWEGGVNKMFHGIQDYEENKARVHLVME 221 (308)
T ss_dssp -CCBCGGGGCCEECGGGEEEEEEESSCBCTTBTCEEECTTGGGSCCCCCCC-----------CCCCC-CCCSCCEEECBC
T ss_pred CCCccCCccccCCCCCCeEEEEEEeeccCCCCCcEEEEcCCCCCccccccccccccCccccccCCccccccCCeEEccCC
Confidence 58999953 3788889975 3567778876422110000 00 011344567789
Q ss_pred CceEEEecCCCCcCccccCc-cceeEEEeeccch
Q 024926 181 PGYAVLHRGRHRHGARATTS-GSRVNLLVWCRSS 213 (260)
Q Consensus 181 ~G~avlh~g~~~H~~~pVTs-G~Ry~Lv~w~rss 213 (260)
+|++++|.+..+|++.|-++ ..|.++++.....
T Consensus 222 aGd~vlf~~~~~H~s~~N~s~~~R~~~~~~y~~~ 255 (308)
T 2a1x_A 222 KGDTVFFHPLLIHGSGQNKTQGFRKAISCHFASA 255 (308)
T ss_dssp TTCEEEECTTCCEEECCBCSSSCEEEEEEEEEET
T ss_pred CccEEEECCCccccCCCCCCCCceEEEEEEEECC
Confidence 99999999999999999765 5688888766554
No 9
>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A*
Probab=97.69 E-value=0.00065 Score=60.84 Aligned_cols=44 Identities=11% Similarity=0.111 Sum_probs=34.1
Q ss_pred ccceecCCCceEEEecCCCCcCccccC--c-cceeEEEeeccchhhh
Q 024926 173 EILDYSHVPGYAVLHRGRHRHGARATT--S-GSRVNLLVWCRSSVFR 216 (260)
Q Consensus 173 ~~~~~~~~~G~avlh~g~~~H~~~pVT--s-G~Ry~Lv~w~rss~~R 216 (260)
+......++|++|+|.+..+|++.|-+ + ..|.++++-..+...|
T Consensus 218 ~~v~~~~~aGd~v~f~~~l~H~s~~N~~ss~~~R~a~~~~y~~~~~~ 264 (313)
T 2fct_A 218 SAVPMQMKAGQFIIFWSTLMHASYPHSGESQEMRMGFASRYVPSFVH 264 (313)
T ss_dssp GCEEECBCTTEEEEEETTSEEEECCBCSSSSSCEEEEEEEEEETTSE
T ss_pred ceeEeeeCCceEEEEeCCceeeCCCCCCCCCCceEEEEEEEECCCce
Confidence 445667899999999999999999987 4 4588887665555434
No 10
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=97.67 E-value=0.00042 Score=61.40 Aligned_cols=89 Identities=18% Similarity=0.146 Sum_probs=58.2
Q ss_pred CCCCCCccccccCC---------eeeEEEeeCC-ceeccceEEeccccccccc--------------------ccccccc
Q 024926 124 MDRDVELGFHVDDS---------EVTLNVCLGR-EFSGGELFFRGVRCDKHVN--------------------TETQSEE 173 (260)
Q Consensus 124 ~~~d~~l~~H~D~S---------~~TlnV~L~~-dfeGG~l~F~~~~~~~~v~--------------------~~~~~~~ 173 (260)
|+......||.|.+ .+|+.|+|.+ .=++|.|.|....-...+. ......+
T Consensus 147 Pg~~~~~~wHqD~~~~~~~p~~~~~~~wi~L~d~~~~nG~l~~vPGSH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (291)
T 2opw_A 147 PHFGGEVSPHQDASFLYTEPLGRVLGVWIAVEDATLENGCLWFIPGSHTSGVSRRMVRAPVGSAPGTSFLGSEPARDNSL 226 (291)
T ss_dssp TTTBCCEEEECGGGTSCEESSSCEEEEEEESSCBCTTTTCEEEETTCSSSCCSEEEEECC----CCEEEEECCCCCCGGG
T ss_pred CCCCCCcCCeeCCcccccCCCCceEEEEEEcccCCCCCCCEEEECCccCCCcccccccCCCCCCCcceeeccccCCCcCC
Confidence 45455689999963 4788888975 3467778775321100000 0001224
Q ss_pred cceecCCCceEEEecCCCCcCccccCcc-ceeEEEeeccc
Q 024926 174 ILDYSHVPGYAVLHRGRHRHGARATTSG-SRVNLLVWCRS 212 (260)
Q Consensus 174 ~~~~~~~~G~avlh~g~~~H~~~pVTsG-~Ry~Lv~w~rs 212 (260)
......++|++|+|.+..+|++.|.++. .|.++++-...
T Consensus 227 ~v~~~~~aGd~~~f~~~~~H~s~~N~s~~~R~~~~~~~~~ 266 (291)
T 2opw_A 227 FVPTPVQRGALVLIHGEVVHKSKQNLSDRSRQAYTFHLME 266 (291)
T ss_dssp CEEECBCTTCEEEEETTCEEEECCBCSSSCCCEEEEEEEE
T ss_pred eeecccCCCcEEEEcCCceecCCCCCCCCceEEEEEEEEc
Confidence 5567889999999999999999988764 57777665444
No 11
>3gja_A CYTC3; halogenase, beta barrel, biosynthetic protein; 2.20A {Streptomyces} PDB: 3gjb_A*
Probab=97.52 E-value=0.00051 Score=62.69 Aligned_cols=44 Identities=16% Similarity=0.176 Sum_probs=33.1
Q ss_pred ccceecCCCceEEEecCCCCcCccccC--cc-ceeEEEeeccchhhh
Q 024926 173 EILDYSHVPGYAVLHRGRHRHGARATT--SG-SRVNLLVWCRSSVFR 216 (260)
Q Consensus 173 ~~~~~~~~~G~avlh~g~~~H~~~pVT--sG-~Ry~Lv~w~rss~~R 216 (260)
+.+....++|++|+|.+..+|++.+-+ +. .|.++++-......|
T Consensus 220 ~~v~~~~~aGd~v~f~~~~~H~s~~N~~ts~~~R~a~~~~y~~~~~~ 266 (319)
T 3gja_A 220 QAYPMVLKPGEAVIFWSNTMHASLPHTGSKTDYRMGFAARYVPTQVQ 266 (319)
T ss_dssp -CCBCCBCTTEEEEEETTSCEEECCCCSCTTCCEEEEEEEEEETTSE
T ss_pred ceeEeeECCCeEEEEcCCccccCCCCCCCCCCcEEEEEEEEECCCce
Confidence 445567899999999999999999988 55 488776655554444
No 12
>3emr_A ECTD; double stranded beta helix, oxidoreductase; HET: MSE; 1.85A {Virgibacillus salexigens}
Probab=97.50 E-value=0.00045 Score=62.89 Aligned_cols=186 Identities=15% Similarity=0.198 Sum_probs=93.7
Q ss_pred cHHHHHhhhcccCCeEEEec-CCCHHHHHHHHHHHHhcccccc--cCCccccccCCCCccceeecccchhHHHHHHH-HH
Q 024926 19 TEASFRSIMAEPIPGIYTFE-MLQPRFCEMLLSEVENFERWVH--DTRFRIMRPNTMNKFGAVLDDFGLETMLDKLM-ND 94 (260)
Q Consensus 19 ~~~~~~~~~~e~~p~Vy~fp-vft~~fC~~LI~e~e~f~~w~~--~s~~~~~rpn~mn~ygvvldd~gl~~~~~~l~-~~ 94 (260)
|.|.+..+-+ .|...++ +|++++|++|.++++....... +....+..|.. ....-+++-......+..++ ..
T Consensus 36 T~eqi~~f~~---dGyvvi~~~ls~eev~~lr~~i~~~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~f~~l~~~p 111 (310)
T 3emr_A 36 TKEQLDSYEK---NGFLQIKNFFSEDEVIDMQKAIFELQDSIKDVASDKVIREPES-NDIRSIFHVHQDDNYFQDVANDK 111 (310)
T ss_dssp CHHHHHHHHH---HSEEEETTCSCHHHHHHHHHHHHHHHHHTTTCCCTTEEECTTT-CCEEEEECHHHHCHHHHHHHTCH
T ss_pred CHHHHHHHHh---CCEEEccCCCCHHHHHHHHHHHHHHHhcccccCCccceecCCC-cceeEEeehhhccHHHHHHHhCh
Confidence 3444443333 3666664 9999999999999987543111 11111111111 11111111001122332222 23
Q ss_pred hhhhhhhhhCCCcCCCCCCccceeEEEEcC-CCCCCccccccCC------------eeeEEEeeCC-ceeccceEEeccc
Q 024926 95 FIRPISKVFFPEVGGSTLDSHHGFVVEYGM-DRDVELGFHVDDS------------EVTLNVCLGR-EFSGGELFFRGVR 160 (260)
Q Consensus 95 ~l~Pl~~~lfp~~~~~~Lds~~~FvvrY~~-~~d~~l~~H~D~S------------~~TlnV~L~~-dfeGG~l~F~~~~ 160 (260)
.|..+++.++. .....+.. .+-+.+ +.+....||.|.. .+|+.|+|.+ .=+.|.|.|....
T Consensus 112 ~l~~i~~~llG----~~~~l~~s-~~~~k~p~~g~~~~wHqD~~~~~~~~g~P~~~~v~~wiaL~D~t~enG~l~viPGS 186 (310)
T 3emr_A 112 RILDIVRHLLG----SDVYVHQS-RINYKPGFKGKEFDWHSDFETWHVEDGMPRMRAISVSIALSDNYSFNGPLMLIPGS 186 (310)
T ss_dssp HHHHHHHHHHT----SCEEEEEE-EEECCCTTCCCCEEEECHHHHHHHHHCCCSSCEEEEEEESSCBCSSSCCCEECTTG
T ss_pred HHHHHHHHHcC----CceEEEee-EEEEcCCCCCCCCCcCCCCccccccCCCcccceEEEEEEecCCCCcCCCEEEEeCC
Confidence 33344444442 11111111 122333 3456789999942 4788889975 3456777775321
Q ss_pred ccccc----ccc--------------ccc----------cc-cceecCCCceEEEecCCCCcCccccCcc-ceeEEEeec
Q 024926 161 CDKHV----NTE--------------TQS----------EE-ILDYSHVPGYAVLHRGRHRHGARATTSG-SRVNLLVWC 210 (260)
Q Consensus 161 ~~~~v----~~~--------------~~~----------~~-~~~~~~~~G~avlh~g~~~H~~~pVTsG-~Ry~Lv~w~ 210 (260)
-...+ ..+ ... .. +.....++|++++|.+..+|++.+-++. .|.++++-.
T Consensus 187 H~~~~~~~g~~p~~~~~~~l~~~~~g~p~~~~~~~~~~~~~~~v~~~~~aGdvl~f~~~~~H~s~~N~S~~~R~~l~~~y 266 (310)
T 3emr_A 187 HNYFVSCVGETPDNNYKESLKKQKLGVPDEESLRELTRIGGGISVPTGKAGSVTLFESNTMHGSTSNITPYPRNNLFMVY 266 (310)
T ss_dssp GGEEEECCC-----------------CCCHHHHHHHHHHHTSCBCCCBSTTCEEEEETTCCEEECCCCSSCCCCEEEEEE
T ss_pred CCCcccccccccccccccccccccccCCCHHHHHHHHhccCceEEeeeCCceEEEEeCCceecCCCCCCCCCeEEEEEEE
Confidence 11000 000 000 01 4556779999999999999999987654 477765554
Q ss_pred cch
Q 024926 211 RSS 213 (260)
Q Consensus 211 rss 213 (260)
.+.
T Consensus 267 ~~~ 269 (310)
T 3emr_A 267 NSV 269 (310)
T ss_dssp EEG
T ss_pred eCC
Confidence 443
No 13
>3nnf_A CURA; non-HAEM Fe(II)/alpha-ketoglutarate-dependent enzymes, catal cryptic chlorination, biosynthetic protein; HET: AKG; 2.20A {Lyngbya majuscula} PDB: 3nnj_A 3nnl_A* 3nnm_A
Probab=96.93 E-value=0.0018 Score=59.79 Aligned_cols=177 Identities=13% Similarity=0.144 Sum_probs=94.5
Q ss_pred eEEEe-cCCCHHHHHHHHHHHHhcccccccCC--ccccccCCCCccce--eecccchhHHHHHHHHHhhhhhhhhhCCCc
Q 024926 33 GIYTF-EMLQPRFCEMLLSEVENFERWVHDTR--FRIMRPNTMNKFGA--VLDDFGLETMLDKLMNDFIRPISKVFFPEV 107 (260)
Q Consensus 33 ~Vy~f-pvft~~fC~~LI~e~e~f~~w~~~s~--~~~~rpn~mn~ygv--vldd~gl~~~~~~l~~~~l~Pl~~~lfp~~ 107 (260)
|-.++ .||+|++-+.|.++++....-...++ ..+.-|+.-.-.-+ -.++++.. .+..|.. ++...+-+ +
T Consensus 41 GYLvlk~vFs~eEv~~l~~el~~~~~d~~~~k~~~~i~~~~s~~lrs~~H~~~~f~~h-~~s~l~~----rll~vl~~-L 114 (344)
T 3nnf_A 41 GYCQIKKIFDFSAIKTIQKTLDQAKQESQISKEKVTLKLGGIDDIDTNDHAYDLVKYD-FVSSFIQ----EKLALLNY-I 114 (344)
T ss_dssp SEEEETTCSCHHHHHHHHHHHHHHHHHCCCCSHHHHHHTTSCCCCBCSEEEECSSCHH-HHHHHHG----GGHHHHHH-H
T ss_pred ceEEEcCCCCHHHHHHHHHHHHHHhhchhhhcccceecCCCccchhcccccchhHHHH-HHHHHHH----HHHHHHHH-H
Confidence 44455 59999999999999998754211111 12222222100011 13334443 2122222 22222221 2
Q ss_pred CCCCCCccceeEEEEcCCCCCCcccccc----------CCeeeEEEeeC--C-ceeccceEEe-----c---ccc-ccc-
Q 024926 108 GGSTLDSHHGFVVEYGMDRDVELGFHVD----------DSEVTLNVCLG--R-EFSGGELFFR-----G---VRC-DKH- 164 (260)
Q Consensus 108 ~~~~Lds~~~FvvrY~~~~d~~l~~H~D----------~S~~TlnV~L~--~-dfeGG~l~F~-----~---~~~-~~~- 164 (260)
.+..+-.|....+.+.++ ...|.||.| +..+|+-|.|. + ++-||-.+.+ | +.- +.+
T Consensus 115 lG~el~i~qs~~fe~kPG-~KGFpWH~D~~~F~~~~~eD~a~S~WIpLd~i~~e~nGGM~~VP~s~~Sgs~~y~~~d~~~ 193 (344)
T 3nnf_A 115 TGKNLMIMHNALFSVEPN-HKGLPWHVGVGSFSFTKTEDFGASIWIPLDKITKEHRGGMQYVSTKIFPGQFYYSVFDLHL 193 (344)
T ss_dssp HTSCEEEEEEEEEEECBT-CCBSCSBCTTTTTTTBCTTSCEEEEEEESSCBCTTTBCSEEEECTTTCCTHHHHHHHHHHH
T ss_pred hCCceeeeecceEeeCCC-CCCCCceecccccccccCCCCeEEEEEECCCCCccCCCceEEecCcccCcceeeecchHHH
Confidence 233333444445677888 679999999 44689999995 3 3556666665 2 100 000
Q ss_pred ---cc---ccccccc------------------------cceecCCCceEEEecCCCCcCccccCcc---ceeEEEeecc
Q 024926 165 ---VN---TETQSEE------------------------ILDYSHVPGYAVLHRGRHRHGARATTSG---SRVNLLVWCR 211 (260)
Q Consensus 165 ---v~---~~~~~~~------------------------~~~~~~~~G~avlh~g~~~H~~~pVTsG---~Ry~Lv~w~r 211 (260)
.+ ....-++ .......||+||+|....+|++.|+..+ .|.++++-.-
T Consensus 194 ~~~Lk~qe~~~sLee~la~~~gi~~~~~~~~i~~~le~~~~ewd~epGDav~F~~~tlHga~plgn~~~~rRRAfS~Rfv 273 (344)
T 3nnf_A 194 KNNIKWDESQGDLNEYVANANTIYNKITEDVIDYTIKDGYEEDEYNLGDAFFFNKYVLHQSVPLKPGLHKLRRAFVIRLV 273 (344)
T ss_dssp HHHTTCCGGGCCHHHHHHHCCCHHHHCCHHHHHHHHTTCEEECCBCTTCEEEEETTCEEEECCBCTTSCSCEEEEEEEEE
T ss_pred HHHhhccCCcccHHHHHHhhcCcccCccccccchhhhhhhccccCCCCcEEEEecceeecCCCCCCCCccceeEEEEEEe
Confidence 00 0000011 1122348999999999999999977764 5767766554
Q ss_pred chhhh
Q 024926 212 SSVFR 216 (260)
Q Consensus 212 ss~~R 216 (260)
++-.|
T Consensus 274 GDDar 278 (344)
T 3nnf_A 274 DYDTR 278 (344)
T ss_dssp ETTCB
T ss_pred cCcce
Confidence 44444
No 14
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=96.55 E-value=0.029 Score=48.23 Aligned_cols=158 Identities=15% Similarity=0.225 Sum_probs=87.3
Q ss_pred eEEEecCCCHHHHHHHHHHHHhccccccc--CCccc-cc----cCCCCcc----------ceeecccchhHHHHHHHHHh
Q 024926 33 GIYTFEMLQPRFCEMLLSEVENFERWVHD--TRFRI-MR----PNTMNKF----------GAVLDDFGLETMLDKLMNDF 95 (260)
Q Consensus 33 ~Vy~fpvft~~fC~~LI~e~e~f~~w~~~--s~~~~-~r----pn~mn~y----------gvvldd~gl~~~~~~l~~~~ 95 (260)
.++...+|++++++.|++++.+--.|..+ ..+++ ++ |....=| |..+...++.+++..+++.
T Consensus 12 ~~~~~~~l~~~~a~~l~~~l~~~~~w~~~~~~~~~~~gk~~~~pR~~~wyg~~~~~Y~Ysg~~~~~~pwp~~L~~l~~~- 90 (204)
T 3s57_A 12 DSSYTVLFGKAEADEIFQELEKEVEYFTGALARVQVFGKWHSVPRKQATYGDAGLTYTFSGLTLSPKPWIPVLERIRDH- 90 (204)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHHCCCCCGGGGEEEETTEEEECSSEEEEEECTTCCEEETTEEECCEECCHHHHHHHHH-
T ss_pred eEEecCcCCHHHHHHHHHHHHHhCCCCCcccceEEECCeEeccCcEEEEECCCCCCcccCCCcccCCCCCHHHHHHHHH-
Confidence 45556799999999999999876677321 11110 11 1110111 1223333444566655542
Q ss_pred hhhhhhhhCCCcCCCCCCccceeEEEEcCCCCCCccccccCC------eeeEEEeeCCceeccceEEeccccccc-cccc
Q 024926 96 IRPISKVFFPEVGGSTLDSHHGFVVEYGMDRDVELGFHVDDS------EVTLNVCLGREFSGGELFFRGVRCDKH-VNTE 168 (260)
Q Consensus 96 l~Pl~~~lfp~~~~~~Lds~~~FvvrY~~~~d~~l~~H~D~S------~~TlnV~L~~dfeGG~l~F~~~~~~~~-v~~~ 168 (260)
+.. ++ +..+| ...+-.|.++.| .+++|.|+. ..-++|+||. ...|. +++... ...+
T Consensus 91 ~~~----~~----g~~~n--~~LvN~Y~~G~d-~i~~H~D~~~~~~~~~~IasvSLG~-----~~~f~-~~~~~~~~~~~ 153 (204)
T 3s57_A 91 VSG----VT----GQTFN--FVLINRYKDGSD-HICEHRDDERELAPGSPIASVSFGA-----SRDFV-FRHKDSRGKSP 153 (204)
T ss_dssp HHH----HH----CCCCS--EEEEEEESSTTC-CEEEECCCCTTBCTTCCEEEEEEES-----CEEEE-EEEGGGCSSSC
T ss_pred HHH----Hh----CCCCc--eeEEEEECCCCC-cccceecChhhccCCCcEEEEECCC-----ceEEE-EEEcCCCcccc
Confidence 211 12 12333 355778988753 799999983 2455666643 22332 111100 0000
Q ss_pred ccccccceecCCCceEEEecCC----CCcCccccC--ccceeEEEe
Q 024926 169 TQSEEILDYSHVPGYAVLHRGR----HRHGARATT--SGSRVNLLV 208 (260)
Q Consensus 169 ~~~~~~~~~~~~~G~avlh~g~----~~H~~~pVT--sG~Ry~Lv~ 208 (260)
........+....|+.++-.|. ..|+..++. .|.|.||..
T Consensus 154 ~~~~~~~~~~L~~GsllvM~g~~q~~w~H~Ip~~~~~~~~RislTF 199 (204)
T 3s57_A 154 SRRVAVVRLPLAHGSLLMMNHPTNTHWYHSLPVRKKVLAPRVNLTF 199 (204)
T ss_dssp SCCCCCEEEEECTTEEEEEETTHHHHEEEEECCCTTCCSCEEEEEE
T ss_pred ccCCceEEEECCCCCEEEECchhhheeEeeccccCCCCCCEEEEEe
Confidence 1112345678899999999998 568877765 388999975
No 15
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=96.53 E-value=0.027 Score=49.44 Aligned_cols=160 Identities=17% Similarity=0.251 Sum_probs=86.7
Q ss_pred CeEEEec-CCCHHHHHHHHHHHHhcccccccCCc----cccccCCCCccc--------eeeccc-chhHHHHHHHHHhhh
Q 024926 32 PGIYTFE-MLQPRFCEMLLSEVENFERWVHDTRF----RIMRPNTMNKFG--------AVLDDF-GLETMLDKLMNDFIR 97 (260)
Q Consensus 32 p~Vy~fp-vft~~fC~~LI~e~e~f~~w~~~s~~----~~~rpn~mn~yg--------vvldd~-gl~~~~~~l~~~~l~ 97 (260)
|+|+.+| +|++++.++|++++.+--.|...... ...-|....-|| ...... ++-.++..+++ .+.
T Consensus 40 ~gl~~~~~fl~~~e~~~Ll~~l~~~~~w~~~~~~~~g~~~~~~R~~~~~g~~~Y~Ys~~~~~~~p~wp~~l~~l~~-~~~ 118 (238)
T 2iuw_A 40 SRVCLYPGFVDVKEADWILEQLCQDVPWKQRTGIREDITYQQPRLTAWYGELPYTYSRITMEPNPHWHPVLRTLKN-RIE 118 (238)
T ss_dssp EEEEEETTSSCHHHHHHHHHHHHHHSCCBCCEEESSSCEEECSSEEEEEECCCTTSCHHHHCCBSSCCHHHHHHHH-HHH
T ss_pred CcEEEECCCCCHHHHHHHHHHHHHhCCCccCceecCCcccccCCeeEEcCCCccccCCcccCCCCCCCHHHHHHHH-HHH
Confidence 4688776 99999999999999754456432210 000011111122 111111 33344444433 111
Q ss_pred hhhhhhCCCcCCCCCCccceeEEEEcCCCCCCccccccCC------eeeEEEeeCCceeccceEEecccccccc--cccc
Q 024926 98 PISKVFFPEVGGSTLDSHHGFVVEYGMDRDVELGFHVDDS------EVTLNVCLGREFSGGELFFRGVRCDKHV--NTET 169 (260)
Q Consensus 98 Pl~~~lfp~~~~~~Lds~~~FvvrY~~~~d~~l~~H~D~S------~~TlnV~L~~dfeGG~l~F~~~~~~~~v--~~~~ 169 (260)
- ++ +..+| ...+-.|.+++ ..+++|.|+. ..-++|+|+ +...|. +++.... +.+.
T Consensus 119 ~----~~----g~~~n--~~LvN~Y~~G~-d~i~~H~D~~~~~~~~~~IaslSLG-----~~~~f~-f~~~~~~~~~~~~ 181 (238)
T 2iuw_A 119 E----NT----GHTFN--SLLCNLYRNEK-DSVDWHSDDEPSLGRCPIIASLSFG-----ATRTFE-MRKKPPPEENGDY 181 (238)
T ss_dssp H----HH----SCCCC--EEEEEEECSTT-CCEEEECCCCGGGCSSCCEEEEEEE-----SCEEEE-EEECCC-------
T ss_pred H----Hh----CCCCC--EEEEEEECCCC-CceeCCcCChhhcCCCCcEEEEECC-----CCEEEE-EeccCCccccCcc
Confidence 1 12 12333 34567788774 3899999974 245566664 223332 1111000 0000
Q ss_pred cccccceecCCCceEEEecCC----CCcCccccC--ccceeEEEee
Q 024926 170 QSEEILDYSHVPGYAVLHRGR----HRHGARATT--SGSRVNLLVW 209 (260)
Q Consensus 170 ~~~~~~~~~~~~G~avlh~g~----~~H~~~pVT--sG~Ry~Lv~w 209 (260)
.....+.+....|+.++..|. ..|+..++. .|.|.||..-
T Consensus 182 ~~~~~~~i~L~~gsllvM~G~~r~~w~H~I~~~~~~~~~RIsLTfR 227 (238)
T 2iuw_A 182 TYVERVKIPLDHGTLLIMEGATQADWQHRVPKEYHSREPRVNLTFR 227 (238)
T ss_dssp -CCCEEEEEECTTCEEEEEETHHHHEEEEECCCSSCCCCEEEEEEE
T ss_pred cCCceEEEEcCCCCEEEEChhhhCccEecCCCcCCCCCCEEEEEee
Confidence 012345678899999999998 579998874 8999999853
No 16
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=95.83 E-value=0.036 Score=51.53 Aligned_cols=143 Identities=18% Similarity=0.331 Sum_probs=73.1
Q ss_pred cccCCeEEEec-CCCHHHHHHHHHHHHhcccccccCC-c---cccccCCCCccceeec------c------cchhHHHHH
Q 024926 28 AEPIPGIYTFE-MLQPRFCEMLLSEVENFERWVHDTR-F---RIMRPNTMNKFGAVLD------D------FGLETMLDK 90 (260)
Q Consensus 28 ~e~~p~Vy~fp-vft~~fC~~LI~e~e~f~~w~~~s~-~---~~~rpn~mn~ygvvld------d------~gl~~~~~~ 90 (260)
....|||+.+| ++|+++.+.|+++++ |..... + ..+.|.....||..++ + .++-.++..
T Consensus 107 ~~lp~Gl~~~p~fis~~Ee~~Ll~~i~----w~~~~~~~~~~~~l~~Rr~~~yG~~Y~Ys~~~~~~~~p~p~~~P~~L~~ 182 (345)
T 3tht_A 107 QALPPGLMVVEEIISSEEEKMLLESVD----WTEDTDNQNSQKSLKHRRVKHFGYEFHYENNNVDKDKPLSGGLPDICES 182 (345)
T ss_dssp CSCCTTEEEETTCSCHHHHHHHHTTCC--------------------CEEECCC------------------CCCHHHHH
T ss_pred ccCCCceEEEcCcCCHHHHHHHHHhcc----cCCccccccCcccccCceEEEECCcccccccccccCCCCCcCcCHHHHH
Confidence 34467888886 999999999988776 433111 0 0111222334553211 1 123344555
Q ss_pred HHHHhhhhhhhhhCCCcCCCCCCccceeEEEEcCCCCCCccccccCCe----eeEEEeeCCceeccceEEeccccccccc
Q 024926 91 LMNDFIRPISKVFFPEVGGSTLDSHHGFVVEYGMDRDVELGFHVDDSE----VTLNVCLGREFSGGELFFRGVRCDKHVN 166 (260)
Q Consensus 91 l~~~~l~Pl~~~lfp~~~~~~Lds~~~FvvrY~~~~d~~l~~H~D~S~----~TlnV~L~~dfeGG~l~F~~~~~~~~v~ 166 (260)
+++.... . ++.+...| ...+-.|.++. .+++|.|+.. .-+.|+|+.+ ..|. +++.
T Consensus 183 l~~r~~~----~---~~~~~~~n--~~lvN~Y~~G~--~I~~H~D~~~~~~~~I~slSLG~~-----~~f~-f~~~---- 241 (345)
T 3tht_A 183 FLEKWLR----K---GYIKHKPD--QMTINQYEPGQ--GIPAHIDTHSAFEDEIVSLSLGSE-----IVMD-FKHP---- 241 (345)
T ss_dssp HHHHHHH----H---TSCSSCCS--EEEEEEECTTC--CEEEECCCTTTBCSCEEEEEESSC-----EEEE-EECT----
T ss_pred HHHHHHh----c---ccCCCCCC--EEEEEEecCCC--CEeeccCCchhcCCeEEEEECCCc-----eeEE-EccC----
Confidence 5543321 1 11122223 45678899875 8999999852 3455666532 2221 1110
Q ss_pred ccccccccceecCCCceEEEecCC----CCcCccccC
Q 024926 167 TETQSEEILDYSHVPGYAVLHRGR----HRHGARATT 199 (260)
Q Consensus 167 ~~~~~~~~~~~~~~~G~avlh~g~----~~H~~~pVT 199 (260)
......+...+|+.++-.|. ..|+..++.
T Consensus 242 ----~~~~~~l~L~~gsLlvM~G~~r~~w~H~I~~~~ 274 (345)
T 3tht_A 242 ----DGIAVPVMLPRRSLLVMTGESRYLWTHGITCRK 274 (345)
T ss_dssp ----TSCEEEEEECTTEEEEECTHHHHTSEEEECCCS
T ss_pred ----CCceEEEEcCCCcEEEEChHHhhceEccCCccc
Confidence 01123457788999999986 447765544
No 17
>3pl0_A Uncharacterized protein; quorum sensing, biofilm formation, double-stranded beta-HELI structural genomics; HET: MSE; 1.91A {Methylibium petroleiphilum}
Probab=92.63 E-value=0.14 Score=45.72 Aligned_cols=76 Identities=21% Similarity=0.229 Sum_probs=57.5
Q ss_pred ccccccCCeeeEEEeeC-CceeccceEEeccccccccccccccccccee-cCCCceEEEecCC-CCcCccccCc------
Q 024926 130 LGFHVDDSEVTLNVCLG-REFSGGELFFRGVRCDKHVNTETQSEEILDY-SHVPGYAVLHRGR-HRHGARATTS------ 200 (260)
Q Consensus 130 l~~H~D~S~~TlnV~L~-~dfeGG~l~F~~~~~~~~v~~~~~~~~~~~~-~~~~G~avlh~g~-~~H~~~pVTs------ 200 (260)
=+.|.|+.++++...++ ..=+||++......... .... -..+|++++..-+ .+|++.||..
T Consensus 163 EGiHrDG~d~v~v~lv~R~Ni~GGet~I~~~~~~~----------~~~~~l~~p~d~llv~D~~~~H~vTpI~~~~~~~~ 232 (254)
T 3pl0_A 163 EGAHRDGVDFVAVVFIGRQGVRGGETRVFDAAGPQ----------GVRFTLEQPWTVLLLDDQQVIHESTPLLPLDPADP 232 (254)
T ss_dssp TCSBCCSSSEEEEEEEEEESEEECCEEEEETTSSE----------EEEECCCSTTCEEEEETTTEEEEECCEEESCTTCT
T ss_pred cccccCCCCEEEEEEecCCccccceEEEEcCCCCc----------cceeEecCCCcEEEEeCCcccCCCCccccCCCCCC
Confidence 46899999999999887 56889999988753221 1122 2478888887754 8999999974
Q ss_pred ---cceeEEEeeccchhh
Q 024926 201 ---GSRVNLLVWCRSSVF 215 (260)
Q Consensus 201 ---G~Ry~Lv~w~rss~~ 215 (260)
|.|-+||+-.+...|
T Consensus 233 ~~~g~RDvlVvtf~~~~~ 250 (254)
T 3pl0_A 233 AVPAHRDTLVLTYRSGGF 250 (254)
T ss_dssp TSCCEEEEEEEEEESSSC
T ss_pred CCceEEEEEEEEecCCcc
Confidence 889999998876544
No 18
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=92.42 E-value=0.36 Score=41.72 Aligned_cols=80 Identities=23% Similarity=0.319 Sum_probs=52.2
Q ss_pred ceeEEEEcCCCCCCccccccCCe-----eeEEEeeCCceeccceEEecccccccccccccccccceecCCCceEEEecCC
Q 024926 116 HGFVVEYGMDRDVELGFHVDDSE-----VTLNVCLGREFSGGELFFRGVRCDKHVNTETQSEEILDYSHVPGYAVLHRGR 190 (260)
Q Consensus 116 ~~FvvrY~~~~d~~l~~H~D~S~-----~TlnV~L~~dfeGG~l~F~~~~~~~~v~~~~~~~~~~~~~~~~G~avlh~g~ 190 (260)
...+-.|.++. .+++|.|..+ .-++|+|+. ...|. +++.. ..+....+....|+.++-.|.
T Consensus 106 ~~LvN~Y~~G~--~i~~H~D~~e~~~~~pI~svSLG~-----~~~f~-f~~~~------~~~~~~~i~L~~GsllvM~G~ 171 (211)
T 3i3q_A 106 ACLINRYAPGA--KLSLHQDKDEPDLRAPIVSVSLGL-----PAIFQ-FGGLK------RNDPLKRLLLEHGDVVVWGGE 171 (211)
T ss_dssp EEEEEEECTTC--CEEEECCCCCSCTTSCEEEEEEES-----CEEEE-ECCSS------TTSCCEEEEECTTCEEEECGG
T ss_pred EEEEEEEcCCC--CcccccCCCccccCCCEEEEECCC-----CeEEE-Eeccc------CCCceEEEECCCCCEEEECch
Confidence 35577898876 9999999422 334556643 23332 11110 012334567899999999887
Q ss_pred ---CCcCccccCc-------cceeEEEee
Q 024926 191 ---HRHGARATTS-------GSRVNLLVW 209 (260)
Q Consensus 191 ---~~H~~~pVTs-------G~Ry~Lv~w 209 (260)
+.|+..++.. |.|.||..-
T Consensus 172 ~r~~~H~I~~~~~~~~p~~~~~RIsLTFR 200 (211)
T 3i3q_A 172 SRLFYHGIQPLKAGFHPLTIDCRYNLTFR 200 (211)
T ss_dssp GTTCCEEECCCCCCCBTTTBTCEEEEEEE
T ss_pred HHceEeccCcccCCcCCCCCCCEEEEEee
Confidence 7899988886 569999853
No 19
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=92.39 E-value=0.24 Score=45.01 Aligned_cols=80 Identities=19% Similarity=0.159 Sum_probs=60.3
Q ss_pred EEEEcCCC----CCCccccccCCeeeEEEeeCCceeccceEEecccccccccccccccccceecCCCceEEEecCC----
Q 024926 119 VVEYGMDR----DVELGFHVDDSEVTLNVCLGREFSGGELFFRGVRCDKHVNTETQSEEILDYSHVPGYAVLHRGR---- 190 (260)
Q Consensus 119 vvrY~~~~----d~~l~~H~D~S~~TlnV~L~~dfeGG~l~F~~~~~~~~v~~~~~~~~~~~~~~~~G~avlh~g~---- 190 (260)
+.+|-+-. ...+++|.|-+.+||...-+ + -|||.... ..+++.+++.+|..||.-|.
T Consensus 159 l~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~-~--v~GLQV~~------------~g~Wi~V~p~pgalvVNiGD~l~~ 223 (319)
T 1w9y_A 159 VSNYPPCPKPDLIKGLRAHTDAGGIILLFQDD-K--VSGLQLLK------------DGQWIDVPPMRHSIVVNLGDQLEV 223 (319)
T ss_dssp EEECCCCSCGGGGSSCCCBCCSSSEEEEEESS-S--CCCEEEEE------------TTEEEECCCCTTCEEEEECHHHHH
T ss_pred EEecCCCcccccccccccccCCCceEEEEecC-C--CCeeeEee------------CCeEEEcccCCCcEEEEhHHHHHH
Confidence 67787532 34689999999999987521 2 25676642 23567889999999999875
Q ss_pred --------CCcCccccCccceeEEEeeccch
Q 024926 191 --------HRHGARATTSGSRVNLLVWCRSS 213 (260)
Q Consensus 191 --------~~H~~~pVTsG~Ry~Lv~w~rss 213 (260)
..|++..-..+.||.+..|+.-.
T Consensus 224 ~SnG~~kS~~HRVv~~~~~~R~Sia~F~~p~ 254 (319)
T 1w9y_A 224 ITNGKYKSVMHRVIAQKDGARMSLASFYNPG 254 (319)
T ss_dssp HTTTSSCCCCEEECCCSSSCCEEEEEEEECC
T ss_pred HhCCeeecccceecCCCCCCceEEEEEecCC
Confidence 68999877778899999999754
No 20
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=91.95 E-value=0.35 Score=44.60 Aligned_cols=79 Identities=19% Similarity=0.195 Sum_probs=60.6
Q ss_pred EEEEcCC----CCCCccccccCCeeeEEEeeCCceeccceEEecccccccccccccccccceecCCCceEEEecCC----
Q 024926 119 VVEYGMD----RDVELGFHVDDSEVTLNVCLGREFSGGELFFRGVRCDKHVNTETQSEEILDYSHVPGYAVLHRGR---- 190 (260)
Q Consensus 119 vvrY~~~----~d~~l~~H~D~S~~TlnV~L~~dfeGG~l~F~~~~~~~~v~~~~~~~~~~~~~~~~G~avlh~g~---- 190 (260)
+.+|-+- ....+++|+|-+.+||... ++ -|||.... ..+++.+++.+|..||.-|.
T Consensus 214 l~~YPp~~~~~~~~g~~~HtD~g~lTlL~q--d~--v~GLQV~~------------~g~Wi~V~p~pgalvVNiGD~l~~ 277 (356)
T 1gp6_A 214 INYYPKCPQPELALGVEAHTDVSALTFILH--NM--VPGLQLFY------------EGKWVTAKCVPDSIVMHIGDTLEI 277 (356)
T ss_dssp EEEECCCSSTTTCCSEEEECCCSSEEEEEE--CS--CCCEEEEE------------TTEEEECCCCTTCEEEEECHHHHH
T ss_pred eeecCCCCCcccccCcCCccCCCeEEEEEE--cC--CCCeEEec------------CCcEEECcCCCCeEEEEeccHHHH
Confidence 6788753 2446899999999999875 33 35677652 13567889999999999874
Q ss_pred --------CCcCccccCccceeEEEeeccch
Q 024926 191 --------HRHGARATTSGSRVNLLVWCRSS 213 (260)
Q Consensus 191 --------~~H~~~pVTsG~Ry~Lv~w~rss 213 (260)
..|++..-....||.+..|+.-.
T Consensus 278 ~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~ 308 (356)
T 1gp6_A 278 LSNGKYKSILHRGLVNKEKVRISWAVFCEPP 308 (356)
T ss_dssp HTTTSSCCCCEEECCCSSCCEEEEEEEEECC
T ss_pred hcCCEeeccCceecCCCCCCEEEEEEeecCC
Confidence 67999866677899999999876
No 21
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=90.91 E-value=0.35 Score=43.06 Aligned_cols=80 Identities=16% Similarity=0.192 Sum_probs=58.6
Q ss_pred EEEEcCCC------CCCccccccCCeeeEEEeeCCceeccceEEecccccccccccccccccceecCCCceEEEecCC--
Q 024926 119 VVEYGMDR------DVELGFHVDDSEVTLNVCLGREFSGGELFFRGVRCDKHVNTETQSEEILDYSHVPGYAVLHRGR-- 190 (260)
Q Consensus 119 vvrY~~~~------d~~l~~H~D~S~~TlnV~L~~dfeGG~l~F~~~~~~~~v~~~~~~~~~~~~~~~~G~avlh~g~-- 190 (260)
+.+|-+-. ...+++|.|-+.+||... + +-|||..... ..+++.+++.+|..||.-|.
T Consensus 154 ~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~q--d--~~~GLqV~~~-----------~g~W~~V~p~pg~~vVNiGD~l 218 (280)
T 3on7_A 154 ILHYPPMTGDEEMGAIRAAAHEDINLITVLPT--A--NEPGLQVKAK-----------DGSWLDVPSDFGNIIINIGDML 218 (280)
T ss_dssp EEEECCCCTTCCCCSEEEEEECCCSSEEEEEC--C--SCCCEEEECT-----------TSCEEECCCCTTCEEEEECHHH
T ss_pred EEECCCCCCccccCcccccCCCCCCeEEEEEe--c--CCCCeEEEcC-----------CCCEEECcCCCCEEEEEcChHH
Confidence 67887532 234789999999998864 2 2367877531 23577889999999999886
Q ss_pred ----------CCcCccccC----ccceeEEEeeccch
Q 024926 191 ----------HRHGARATT----SGSRVNLLVWCRSS 213 (260)
Q Consensus 191 ----------~~H~~~pVT----sG~Ry~Lv~w~rss 213 (260)
..|++..-. ...||.+..|++-.
T Consensus 219 ~~~Tng~~kS~~HRVv~~~~~~~~~~R~Si~~F~~P~ 255 (280)
T 3on7_A 219 QEASDGYFPSTSHRVINPEGTDKTKSRISLPLFLHPH 255 (280)
T ss_dssp HHHTTTSSCCCCEEEECCTTCCTTSCEEECCEEECCC
T ss_pred HHHhCCcccCCCceEeCCCCCCCCCCeEEEEEEEcCC
Confidence 578876542 45799999999865
No 22
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=89.71 E-value=0.52 Score=42.45 Aligned_cols=80 Identities=21% Similarity=0.210 Sum_probs=57.3
Q ss_pred EEEEcCC----CCCCccccccCCeeeEEEeeCCceeccceEEecccccccccccccccccceecCCCceEEEecCC----
Q 024926 119 VVEYGMD----RDVELGFHVDDSEVTLNVCLGREFSGGELFFRGVRCDKHVNTETQSEEILDYSHVPGYAVLHRGR---- 190 (260)
Q Consensus 119 vvrY~~~----~d~~l~~H~D~S~~TlnV~L~~dfeGG~l~F~~~~~~~~v~~~~~~~~~~~~~~~~G~avlh~g~---- 190 (260)
+.+|-+- .+..+++|+|-+.+||..+ ++ -|||..... ..+++.+++.+|..||.-|.
T Consensus 173 ~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~q--d~--v~GLqV~~~-----------~g~W~~V~p~pg~~vVNiGD~l~~ 237 (312)
T 3oox_A 173 LLHYPPIPKDATGVRAGAHGDINTITLLLG--AE--EGGLEVLDR-----------DGQWLPINPPPGCLVINIGDMLER 237 (312)
T ss_dssp EEEECCCSSCCC--CEEEECCCSSEEEEEC--CT--TSCEEEECT-----------TSCEEECCCCSSCEEEEECHHHHH
T ss_pred eEecCCCCCCcCCcCccceecCceEEEEeE--cC--cCceEEECC-----------CCcEEECCCCCCeEEEEhHHHHHH
Confidence 5678762 2356789999999998854 33 366776531 23577889999999999875
Q ss_pred --------CCcCccccC----ccceeEEEeeccch
Q 024926 191 --------HRHGARATT----SGSRVNLLVWCRSS 213 (260)
Q Consensus 191 --------~~H~~~pVT----sG~Ry~Lv~w~rss 213 (260)
..|++..-. ...||.+..|+.-.
T Consensus 238 ~TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~ 272 (312)
T 3oox_A 238 LTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFA 272 (312)
T ss_dssp HTTTSSCCCCEEECCCCGGGTTSCEEECCEEECCC
T ss_pred HhCCeecCCCceEeCCCccCCCCCEEEEEEEecCC
Confidence 579986432 34599999999865
No 23
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=89.61 E-value=0.51 Score=42.91 Aligned_cols=70 Identities=14% Similarity=0.110 Sum_probs=53.6
Q ss_pred CCCccccccCCeeeEEEeeCCceeccceEEecccccccccccccccccceecCCCceEEEecCC------------CCcC
Q 024926 127 DVELGFHVDDSEVTLNVCLGREFSGGELFFRGVRCDKHVNTETQSEEILDYSHVPGYAVLHRGR------------HRHG 194 (260)
Q Consensus 127 d~~l~~H~D~S~~TlnV~L~~dfeGG~l~F~~~~~~~~v~~~~~~~~~~~~~~~~G~avlh~g~------------~~H~ 194 (260)
...+++|.|-+.+||... ++ -|||..... .. ++.+++.+|..||.-|. ..|+
T Consensus 208 ~~g~~~HtD~g~lTlL~q--d~--v~GLQV~~~-----------~g-Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HR 271 (331)
T 1odm_A 208 KLSFEWHEDVSLITVLYQ--SN--VQNLQVETA-----------AG-YQDIEADDTGYLINCGSYMAHLTNNYYKAPIHR 271 (331)
T ss_dssp EEEEEEECCSSSEEEEEE--CS--SCCEEEEET-----------TE-EEECCCCTTSEEEEECHHHHHHTTTSSCCCCEE
T ss_pred ccccccccCCCeEEEEee--CC--CCCEEEEcC-----------CC-eEECCCCCCeEEEEccHHHHHHhCCEeeCCCce
Confidence 346899999999999876 32 367776531 23 66789999999999875 5799
Q ss_pred ccccCccceeEEEeeccch
Q 024926 195 ARATTSGSRVNLLVWCRSS 213 (260)
Q Consensus 195 ~~pVTsG~Ry~Lv~w~rss 213 (260)
+.. ....||.+..|+.-.
T Consensus 272 Vv~-~~~~R~Sia~F~~P~ 289 (331)
T 1odm_A 272 VKW-VNAERQSLPFFVNLG 289 (331)
T ss_dssp EEC-CCSCEEEEEEEECCC
T ss_pred eCC-CCCCEEEEEEEEcCC
Confidence 863 356799999999865
No 24
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=89.30 E-value=0.62 Score=42.03 Aligned_cols=81 Identities=21% Similarity=0.159 Sum_probs=57.6
Q ss_pred EEEEcCCC--------CCCccccccCCeeeEEEeeCCceeccc--eEEecccccccccccccccccceecCCCceEEEec
Q 024926 119 VVEYGMDR--------DVELGFHVDDSEVTLNVCLGREFSGGE--LFFRGVRCDKHVNTETQSEEILDYSHVPGYAVLHR 188 (260)
Q Consensus 119 vvrY~~~~--------d~~l~~H~D~S~~TlnV~L~~dfeGG~--l~F~~~~~~~~v~~~~~~~~~~~~~~~~G~avlh~ 188 (260)
+.+|-+-. +..+++|+|-+.+||..+=+ + .||. |.... ..+++.+++.+|..||.-
T Consensus 161 l~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~-~-v~G~~~LqV~~------------~g~W~~V~p~pg~lvVNi 226 (311)
T 1dcs_A 161 FRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTP-C-ANGFVSLQAEV------------GGAFTDLPYRPDAVLVFC 226 (311)
T ss_dssp EEEECC-----------CCEEEEEECSSEEEEEEEC-C-TTCCCCEEEEE------------TTEEEECCCCTTCEEEEE
T ss_pred eecCCCCCcccccCccccccccccCCCeEEEEecCC-C-CCCceeEEEEe------------CCEEEeCcCCCCeEEEEH
Confidence 67886522 33489999999999987621 2 2332 77654 125678899999999998
Q ss_pred CC------------CCcCccccC-----ccceeEEEeeccch
Q 024926 189 GR------------HRHGARATT-----SGSRVNLLVWCRSS 213 (260)
Q Consensus 189 g~------------~~H~~~pVT-----sG~Ry~Lv~w~rss 213 (260)
|. ..|++..-. ...||.+..|+.-.
T Consensus 227 GD~l~~~TnG~~kS~~HRVv~~~~~~~~~~~R~Si~~F~~p~ 268 (311)
T 1dcs_A 227 GAIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPN 268 (311)
T ss_dssp CHHHHHHTTSCSCCCCEEECCC----CTTCCEEEEEEEECCC
T ss_pred HHHHHHHhCCcccCCCceEeCCCcccCCCCCeEEEEEEEcCC
Confidence 75 579987655 55799999999865
No 25
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=86.24 E-value=1.1 Score=38.30 Aligned_cols=76 Identities=13% Similarity=0.080 Sum_probs=52.6
Q ss_pred eeEEEEcCCCCCCccccccCCeeeEEEeeC---CceeccceEEecccccccccccccccccceecCCCceEEEecCCCCc
Q 024926 117 GFVVEYGMDRDVELGFHVDDSEVTLNVCLG---REFSGGELFFRGVRCDKHVNTETQSEEILDYSHVPGYAVLHRGRHRH 193 (260)
Q Consensus 117 ~FvvrY~~~~d~~l~~H~D~S~~TlnV~L~---~dfeGG~l~F~~~~~~~~v~~~~~~~~~~~~~~~~G~avlh~g~~~H 193 (260)
+++.+-.++. ++.+|+|-+...+.+-|+ .+ +|-.++..+. .+.-+.|.+++|-.+..|
T Consensus 104 a~fs~L~pG~--~I~pH~g~~n~~lR~HL~L~~p~-~~~~i~V~~~----------------~~~w~eGe~~~fDds~~H 164 (197)
T 3rcq_A 104 IKYSIMHPGT--HVWPHTGPTNCRLRMHLGLVIPK-EGCKIRCANE----------------TKTWEEGKVLIFDDSFEH 164 (197)
T ss_dssp EEEEEECTTE--EEEEECCSCTTEEEEEEEEECCS-SSEEEEETTE----------------EECCCBTCEEEECTTSCE
T ss_pred EEEEEeCCCC--CcCCeeCCCCCeEEEEEEEEeCC-CCcEEEECCE----------------EEEeeCCcEEEEcCCeEE
Confidence 4455666764 899999976544444443 22 2333332221 246789999999999999
Q ss_pred CccccCccceeEEEeecc
Q 024926 194 GARATTSGSRVNLLVWCR 211 (260)
Q Consensus 194 ~~~pVTsG~Ry~Lv~w~r 211 (260)
++---+.+.|++|++=+.
T Consensus 165 ev~N~~d~~RvvL~~D~~ 182 (197)
T 3rcq_A 165 EVWQDASSFRLIFIVDVW 182 (197)
T ss_dssp EEEECSSSCEEEEEEEEE
T ss_pred EEEECCCCCEEEEEEeee
Confidence 999999999999987443
No 26
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=74.58 E-value=1.1 Score=34.26 Aligned_cols=50 Identities=22% Similarity=0.387 Sum_probs=27.5
Q ss_pred CCCCcCccccCccceeEEEeeccc-hhhhhhHhhh-----hhcccccchhhhhhhH
Q 024926 189 GRHRHGARATTSGSRVNLLVWCRS-SVFRELKKYQ-----KECSSWCAECQREKKE 238 (260)
Q Consensus 189 g~~~H~~~pVTsG~Ry~Lv~w~rs-s~~R~~~~~~-----~~~~~~c~~c~~~~~~ 238 (260)
|.+.|++.|+-.-.+..+|.=+.+ ..|.+..+-. -=++.||+-|......
T Consensus 3 ~~~~~~~~~~~~~~~~~mv~~l~~~~~f~~~~~~~k~vvv~F~a~wC~~C~~~~p~ 58 (125)
T 1r26_A 3 GWHHHHHHGIRMRARYPSVVDVYSVEQFRNIMSEDILTVAWFTAVWCGPCKTIERP 58 (125)
T ss_dssp ---------CCCSSCCSCCEEECCHHHHHHHHHSSSCEEEEEECTTCHHHHHTHHH
T ss_pred ccccccccceeeeccccceEECCCHHHHHHHHccCCEEEEEEECCcCHhHHHHHHH
Confidence 447788888888888888777777 6676554211 1257899999665443
No 27
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=55.73 E-value=9.5 Score=36.72 Aligned_cols=45 Identities=9% Similarity=0.083 Sum_probs=36.8
Q ss_pred cCCCceEEEecCCCCcCccccCccceeEEEeeccchhhhhhHhhhhhcccccchhhhhhhH
Q 024926 178 SHVPGYAVLHRGRHRHGARATTSGSRVNLLVWCRSSVFRELKKYQKECSSWCAECQREKKE 238 (260)
Q Consensus 178 ~~~~G~avlh~g~~~H~~~pVTsG~Ry~Lv~w~rss~~R~~~~~~~~~~~~c~~c~~~~~~ 238 (260)
...||+.|+..+...|++.++.+|.....|+.+ .-||.|..+..-
T Consensus 370 ~vePGD~V~WH~D~iH~V~~~h~g~~~s~V~YI----------------pa~P~~~~N~~y 414 (461)
T 2dbn_A 370 KLEAGDSVWWHCDVIHSVAPVENQQGWGNVMYI----------------PAAPMCEKNLAY 414 (461)
T ss_dssp CBCTTCEEEEETTCCEEECCBSSCCSCCCEEEC----------------CBCEESHHHHHH
T ss_pred CCCCCCEEEEcCCCccccccCCCCCcceeEEEe----------------cCCCCcccCHHH
Confidence 468999999999999999999999887766543 338999777654
No 28
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=53.80 E-value=50 Score=28.74 Aligned_cols=32 Identities=16% Similarity=0.265 Sum_probs=25.8
Q ss_pred CCCccccccCC------eeeEEEeeCCceeccceEEec
Q 024926 127 DVELGFHVDDS------EVTLNVCLGREFSGGELFFRG 158 (260)
Q Consensus 127 d~~l~~H~D~S------~~TlnV~L~~dfeGG~l~F~~ 158 (260)
...+.||.|.| .+++.-|+.-.=+||+|.|..
T Consensus 102 ~~~~~wHtD~sy~~~pP~~~~L~c~~~p~~GG~T~~ad 139 (301)
T 1oih_A 102 QRANSWHTDVTFVEAYPKASILRSVVAPASGGDTVWAN 139 (301)
T ss_dssp -CCCSCBCTTTTSSSCCSEEEEEEEECCSSCCCEEEEE
T ss_pred CcCcCCEecccCcCCCCceEEEEEeecCCCCCcccccc
Confidence 45789999998 688988996544899999975
No 29
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=53.25 E-value=23 Score=27.01 Aligned_cols=75 Identities=15% Similarity=0.100 Sum_probs=42.7
Q ss_pred eEEEEcCCCCCCccccccCCeeeEEEeeCCceeccceEEecccccccccccccccccceecCCCceEEEecCCCCcCccc
Q 024926 118 FVVEYGMDRDVELGFHVDDSEVTLNVCLGREFSGGELFFRGVRCDKHVNTETQSEEILDYSHVPGYAVLHRGRHRHGARA 197 (260)
Q Consensus 118 FvvrY~~~~d~~l~~H~D~S~~TlnV~L~~dfeGG~l~F~~~~~~~~v~~~~~~~~~~~~~~~~G~avlh~g~~~H~~~p 197 (260)
..++..++. .+.+|.+..++-+.+. |++.+.- +.. .+...+|+++..|....|.-..
T Consensus 43 ~~~~~~pG~--~~~~H~~~~E~~~Vl~-------G~~~~~~-~g~-------------~~~l~~GD~v~ip~g~~H~~~~ 99 (119)
T 3lwc_A 43 GYGRYAPGQ--SLTETMAVDDVMIVLE-------GRLSVST-DGE-------------TVTAGPGEIVYMPKGETVTIRS 99 (119)
T ss_dssp EEEEECTTC--EEEEECSSEEEEEEEE-------EEEEEEE-TTE-------------EEEECTTCEEEECTTCEEEEEE
T ss_pred EEEEECCCC--CcCccCCCCEEEEEEe-------CEEEEEE-CCE-------------EEEECCCCEEEECCCCEEEEEc
Confidence 355666664 6888985545444332 3333321 111 1356899999999999998654
Q ss_pred cCccceeEEEeeccchhhhhh
Q 024926 198 TTSGSRVNLLVWCRSSVFREL 218 (260)
Q Consensus 198 VTsG~Ry~Lv~w~rss~~R~~ 218 (260)
. | ....++|+-.++|++.
T Consensus 100 ~--~-~~~~~l~v~~P~w~~~ 117 (119)
T 3lwc_A 100 H--E-EGALTAYVTYPHWRPA 117 (119)
T ss_dssp E--E-EEEEEEEEEECC----
T ss_pred C--C-CCeEEEEEECCCCccc
Confidence 3 3 4555666666668764
No 30
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=51.96 E-value=4.3 Score=27.14 Aligned_cols=13 Identities=38% Similarity=0.675 Sum_probs=9.4
Q ss_pred cccccchhhhhhh
Q 024926 225 CSSWCAECQREKK 237 (260)
Q Consensus 225 ~~~~c~~c~~~~~ 237 (260)
|+.|||-|.....
T Consensus 7 ~a~wC~~C~~~~~ 19 (77)
T 1ilo_A 7 YGTGCANCQMLEK 19 (77)
T ss_dssp ECSSSSTTHHHHH
T ss_pred EcCCChhHHHHHH
Confidence 5689999965443
No 31
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=48.38 E-value=66 Score=23.16 Aligned_cols=33 Identities=9% Similarity=0.097 Sum_probs=26.7
Q ss_pred ecCCCceEEEecCCCCcCccccCccceeEEEeec
Q 024926 177 YSHVPGYAVLHRGRHRHGARATTSGSRVNLLVWC 210 (260)
Q Consensus 177 ~~~~~G~avlh~g~~~H~~~pVTsG~Ry~Lv~w~ 210 (260)
+...+|++++.+....|..... .+.++.+|++-
T Consensus 78 ~~l~~Gd~i~i~~~~~H~~~~~-~~~~~~~i~~~ 110 (114)
T 2ozj_A 78 IDLVPEDVLMVPAHKIHAIAGK-GRFKMLQITLI 110 (114)
T ss_dssp EEECTTCEEEECTTCCBEEEEE-EEEEEEEEEEC
T ss_pred EEecCCCEEEECCCCcEEEEeC-CCcEEEEEEEc
Confidence 3578999999999999998876 46777777654
No 32
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=46.55 E-value=92 Score=26.61 Aligned_cols=43 Identities=14% Similarity=0.135 Sum_probs=29.9
Q ss_pred eeEEEEcCC-CCCCccccccCC------eeeEEEeeCCceeccceEEecc
Q 024926 117 GFVVEYGMD-RDVELGFHVDDS------EVTLNVCLGREFSGGELFFRGV 159 (260)
Q Consensus 117 ~FvvrY~~~-~d~~l~~H~D~S------~~TlnV~L~~dfeGG~l~F~~~ 159 (260)
.+++.-.++ ......||.|.| .+++.-|+.-.=+||+|.|...
T Consensus 82 i~~v~~~~~~~~~~~~wHtD~sy~~~pp~~~~L~c~~~p~~GG~T~~~d~ 131 (283)
T 1otj_A 82 IIVLDTHNDNPPDNDNWHTDVTFIETPPAGAILAAKELPSTGGDTLWTSG 131 (283)
T ss_dssp EEEEEEBTTBCCCCCSCBCTTTTSSSCEEEEEEEEEECCSSCCCEEEEEH
T ss_pred EEEEeCCCCCCCcCCCcEeeccCccCCCceEEEEEEecCCCCCcceeeeH
Confidence 445554442 112457999998 6888889965558999999863
No 33
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=45.13 E-value=87 Score=22.88 Aligned_cols=41 Identities=7% Similarity=0.075 Sum_probs=28.3
Q ss_pred ecCCCceEEEecCCCCcCccccCccceeEEEeeccchhhhh
Q 024926 177 YSHVPGYAVLHRGRHRHGARATTSGSRVNLLVWCRSSVFRE 217 (260)
Q Consensus 177 ~~~~~G~avlh~g~~~H~~~pVTsG~Ry~Lv~w~rss~~R~ 217 (260)
+...+|++++.+....|.........-..+++|+..+.+..
T Consensus 74 ~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~i~f~~~~~~~ 114 (128)
T 4i4a_A 74 FPVTKGDLIIIPLDSEHHVINNNQEDFHFYTIWWDKESTLN 114 (128)
T ss_dssp EEEETTCEEEECTTCCEEEEECSSSCEEEEEEEECHHHHHH
T ss_pred EEECCCcEEEECCCCcEEeEeCCCCCEEEEEEEECHHHHHH
Confidence 35688999999999999988765443333455555554443
No 34
>1nx8_A CARC, carbapenem synthase; jelly roll, unknown function; HET: AKG N7P; 2.30A {Pectobacterium carotovorum} SCOP: b.82.2.8 PDB: 1nx4_A*
Probab=43.76 E-value=10 Score=32.61 Aligned_cols=32 Identities=16% Similarity=0.083 Sum_probs=26.7
Q ss_pred CCccccccCC------eeeEEEeeCCce--eccceEEecc
Q 024926 128 VELGFHVDDS------EVTLNVCLGREF--SGGELFFRGV 159 (260)
Q Consensus 128 ~~l~~H~D~S------~~TlnV~L~~df--eGG~l~F~~~ 159 (260)
..+.||.|.| .+++.-|+...= +||+|.|...
T Consensus 96 ~~~~~HtD~sy~~~pp~~~~L~c~~~p~~~~GG~T~~~d~ 135 (273)
T 1nx8_A 96 GQLPFHADGGLLLSQVDQVFLYAAEIKNVKFRGATTVCDH 135 (273)
T ss_dssp SCEEEECTTTTTTCCCCEEEEEEEEEESCSSSSCEEEEEH
T ss_pred cCCCCcCCCCCccCCCeeEEEEeEeCCCCCCCCcchhhhH
Confidence 4788999998 789999997555 7999999863
No 35
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=42.81 E-value=7 Score=26.37 Aligned_cols=12 Identities=25% Similarity=0.471 Sum_probs=9.1
Q ss_pred ccccchhhhhhh
Q 024926 226 SSWCAECQREKK 237 (260)
Q Consensus 226 ~~~c~~c~~~~~ 237 (260)
+.|||-|.....
T Consensus 10 ~~~C~~C~~~~~ 21 (85)
T 1nho_A 10 SPTCPYCPMAIE 21 (85)
T ss_dssp CSSSCCSTTHHH
T ss_pred CCCCcchHHHHH
Confidence 579999976544
No 36
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=40.28 E-value=87 Score=27.18 Aligned_cols=32 Identities=13% Similarity=0.084 Sum_probs=25.2
Q ss_pred CCCccccccCCe------eeEEEeeCCceeccceEEec
Q 024926 127 DVELGFHVDDSE------VTLNVCLGREFSGGELFFRG 158 (260)
Q Consensus 127 d~~l~~H~D~S~------~TlnV~L~~dfeGG~l~F~~ 158 (260)
...+.||.|.|- +++.-|+.-.=+||+|.|..
T Consensus 91 ~~~~~wH~D~sy~~~pp~~~~l~~~~~p~~GG~T~~~d 128 (277)
T 3pvj_A 91 RDNAVWHTDVTFLPTPALGAVLSAKQLPAYGGDTLWAS 128 (277)
T ss_dssp GGGSSCBCTTTTSSSCCCEEEEEEEECCSSCCCEEEEE
T ss_pred CcCCCceeeCCCcCCCCceEEEEeeccCCCCCCcEeee
Confidence 346889999874 78888886555899999975
No 37
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=40.09 E-value=8.2 Score=27.03 Aligned_cols=10 Identities=20% Similarity=0.587 Sum_probs=7.7
Q ss_pred cccchhhhhh
Q 024926 227 SWCAECQREK 236 (260)
Q Consensus 227 ~~c~~c~~~~ 236 (260)
.||+.|....
T Consensus 29 ~~C~~C~~~~ 38 (106)
T 3die_A 29 TACGPCKMIA 38 (106)
T ss_dssp SBCHHHHHHH
T ss_pred CCCHHHHHHh
Confidence 7999996543
No 38
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=39.89 E-value=8 Score=26.98 Aligned_cols=11 Identities=27% Similarity=1.075 Sum_probs=8.2
Q ss_pred cccchhhhhhh
Q 024926 227 SWCAECQREKK 237 (260)
Q Consensus 227 ~~c~~c~~~~~ 237 (260)
.|||.|.....
T Consensus 29 ~~C~~C~~~~~ 39 (104)
T 2vim_A 29 QWCGPCRNIAP 39 (104)
T ss_dssp TTCHHHHHHHH
T ss_pred CCCHHHHHhhH
Confidence 79999965543
No 39
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=39.57 E-value=8.1 Score=28.65 Aligned_cols=12 Identities=42% Similarity=1.176 Sum_probs=9.2
Q ss_pred cccccchhhhhh
Q 024926 225 CSSWCAECQREK 236 (260)
Q Consensus 225 ~~~~c~~c~~~~ 236 (260)
++.|||-|.+..
T Consensus 20 ~A~WC~~C~~~~ 31 (106)
T 3kp8_A 20 GAYWCPHCQDQK 31 (106)
T ss_dssp ECTTCHHHHHHH
T ss_pred ECCCCHHHHHHH
Confidence 468999996654
No 40
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=39.32 E-value=8.1 Score=26.03 Aligned_cols=12 Identities=33% Similarity=0.844 Sum_probs=8.9
Q ss_pred ccccchhhhhhh
Q 024926 226 SSWCAECQREKK 237 (260)
Q Consensus 226 ~~~c~~c~~~~~ 237 (260)
+.|||-|.....
T Consensus 11 ~~~C~~C~~~~~ 22 (85)
T 1fo5_A 11 SPMCPHCPAAKR 22 (85)
T ss_dssp CCCSSCCCTHHH
T ss_pred CCCCCchHHHHH
Confidence 479999976543
No 41
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=38.19 E-value=11 Score=27.14 Aligned_cols=11 Identities=18% Similarity=0.676 Sum_probs=8.3
Q ss_pred cccchhhhhhh
Q 024926 227 SWCAECQREKK 237 (260)
Q Consensus 227 ~~c~~c~~~~~ 237 (260)
.||+-|.....
T Consensus 27 ~wC~~C~~~~~ 37 (112)
T 2voc_A 27 PWCGPSKMIAP 37 (112)
T ss_dssp TTBGGGGGHHH
T ss_pred CCCHHHHHHHH
Confidence 69999966544
No 42
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=37.49 E-value=9.2 Score=26.70 Aligned_cols=11 Identities=27% Similarity=1.005 Sum_probs=8.2
Q ss_pred cccchhhhhhh
Q 024926 227 SWCAECQREKK 237 (260)
Q Consensus 227 ~~c~~c~~~~~ 237 (260)
.||+.|.....
T Consensus 28 ~~C~~C~~~~~ 38 (105)
T 1fb6_A 28 PWCGPCKLIAP 38 (105)
T ss_dssp TTCHHHHHHHH
T ss_pred CCChHHHHHHH
Confidence 68999965543
No 43
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=37.26 E-value=76 Score=27.39 Aligned_cols=33 Identities=21% Similarity=0.399 Sum_probs=23.9
Q ss_pred cCCCceEEEecCCCCcCccccCccceeEEEeecc
Q 024926 178 SHVPGYAVLHRGRHRHGARATTSGSRVNLLVWCR 211 (260)
Q Consensus 178 ~~~~G~avlh~g~~~H~~~pVTsG~Ry~Lv~w~r 211 (260)
...+|+.+.+++...|..+ +.+.-=.++++|.-
T Consensus 174 ~l~pGd~v~ipsgv~Ha~r-t~dePllalwvW~G 206 (217)
T 4b29_A 174 MLEPGQTRFHPANAPHAMT-TLTDPILTLVLWRG 206 (217)
T ss_dssp EECTTCEEEECTTCCEEEE-CCSSCEEEEEEEES
T ss_pred ecCCCCEEEcCCCCceeEE-ECCccEEEEEEEeC
Confidence 4688999999999999998 33333444566643
No 44
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=37.14 E-value=9.4 Score=26.78 Aligned_cols=11 Identities=36% Similarity=1.147 Sum_probs=8.2
Q ss_pred ccccchhhhhh
Q 024926 226 SSWCAECQREK 236 (260)
Q Consensus 226 ~~~c~~c~~~~ 236 (260)
+.||+.|....
T Consensus 30 ~~~C~~C~~~~ 40 (109)
T 3tco_A 30 AEWCAPCHLYE 40 (109)
T ss_dssp CTTCHHHHHHH
T ss_pred CCCCHHHHhhh
Confidence 47999996554
No 45
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=36.38 E-value=9.8 Score=27.24 Aligned_cols=12 Identities=17% Similarity=0.706 Sum_probs=8.6
Q ss_pred ccccchhhhhhh
Q 024926 226 SSWCAECQREKK 237 (260)
Q Consensus 226 ~~~c~~c~~~~~ 237 (260)
+.|||.|.....
T Consensus 33 a~wC~~C~~~~~ 44 (111)
T 2pu9_C 33 TQWCGPSKAMAP 44 (111)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCcCHhHHHHCH
Confidence 479999965543
No 46
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=36.27 E-value=9.9 Score=26.61 Aligned_cols=12 Identities=33% Similarity=1.096 Sum_probs=8.5
Q ss_pred ccccchhhhhhh
Q 024926 226 SSWCAECQREKK 237 (260)
Q Consensus 226 ~~~c~~c~~~~~ 237 (260)
+.||+.|.....
T Consensus 29 ~~~C~~C~~~~~ 40 (105)
T 3m9j_A 29 ATWCGPCKMIKP 40 (105)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCCChhhHHHHH
Confidence 369999965543
No 47
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=36.26 E-value=9.9 Score=26.82 Aligned_cols=11 Identities=27% Similarity=1.141 Sum_probs=8.0
Q ss_pred ccccchhhhhh
Q 024926 226 SSWCAECQREK 236 (260)
Q Consensus 226 ~~~c~~c~~~~ 236 (260)
+.||+.|....
T Consensus 30 ~~~C~~C~~~~ 40 (111)
T 3uvt_A 30 APWCGHCKTLA 40 (111)
T ss_dssp CSSCHHHHHHH
T ss_pred CCCChhHHHhh
Confidence 37999996543
No 48
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=36.04 E-value=9.9 Score=27.80 Aligned_cols=12 Identities=25% Similarity=1.021 Sum_probs=8.6
Q ss_pred ccccchhhhhhh
Q 024926 226 SSWCAECQREKK 237 (260)
Q Consensus 226 ~~~c~~c~~~~~ 237 (260)
+.|||.|.....
T Consensus 46 a~wC~~C~~~~~ 57 (124)
T 1faa_A 46 TQWCGPCKAMAP 57 (124)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCcCHhHHHHhH
Confidence 379999965544
No 49
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=35.55 E-value=11 Score=27.31 Aligned_cols=11 Identities=27% Similarity=1.078 Sum_probs=8.1
Q ss_pred cccchhhhhhh
Q 024926 227 SWCAECQREKK 237 (260)
Q Consensus 227 ~~c~~c~~~~~ 237 (260)
.||+-|.+...
T Consensus 35 ~wC~~C~~~~p 45 (121)
T 2djj_A 35 PWCGHCKALAP 45 (121)
T ss_dssp SSCTTHHHHHH
T ss_pred CCCHhHHHhhH
Confidence 69999965443
No 50
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=35.25 E-value=11 Score=26.55 Aligned_cols=11 Identities=27% Similarity=1.063 Sum_probs=8.1
Q ss_pred cccchhhhhhh
Q 024926 227 SWCAECQREKK 237 (260)
Q Consensus 227 ~~c~~c~~~~~ 237 (260)
.||+.|.....
T Consensus 27 ~~C~~C~~~~~ 37 (105)
T 1nsw_A 27 AWCGPCRMMAP 37 (105)
T ss_dssp TTCHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 68999965543
No 51
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=35.25 E-value=11 Score=26.09 Aligned_cols=11 Identities=36% Similarity=0.954 Sum_probs=8.1
Q ss_pred cccchhhhhhh
Q 024926 227 SWCAECQREKK 237 (260)
Q Consensus 227 ~~c~~c~~~~~ 237 (260)
.||+.|.....
T Consensus 26 ~~C~~C~~~~~ 36 (104)
T 2e0q_A 26 EWCAPCLILAP 36 (104)
T ss_dssp TTCHHHHHHHH
T ss_pred CCChhHHHHhH
Confidence 68999965543
No 52
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=35.14 E-value=11 Score=26.82 Aligned_cols=11 Identities=27% Similarity=1.078 Sum_probs=8.4
Q ss_pred cccchhhhhhh
Q 024926 227 SWCAECQREKK 237 (260)
Q Consensus 227 ~~c~~c~~~~~ 237 (260)
.||+.|.+...
T Consensus 34 ~~C~~C~~~~~ 44 (120)
T 1mek_A 34 PWCGHCKALAP 44 (120)
T ss_dssp SSCSTTSTTHH
T ss_pred CCCHHHHHhhH
Confidence 69999976544
No 53
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=34.97 E-value=11 Score=27.05 Aligned_cols=12 Identities=33% Similarity=0.894 Sum_probs=6.7
Q ss_pred ccccchhhhhhh
Q 024926 226 SSWCAECQREKK 237 (260)
Q Consensus 226 ~~~c~~c~~~~~ 237 (260)
+.||+.|.....
T Consensus 30 a~wC~~C~~~~~ 41 (112)
T 3d6i_A 30 TSWAEPCKALKQ 41 (112)
T ss_dssp CCC--CHHHHHH
T ss_pred CCCCHHHHHHHH
Confidence 479999966443
No 54
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=34.75 E-value=11 Score=26.63 Aligned_cols=11 Identities=27% Similarity=1.014 Sum_probs=8.1
Q ss_pred cccchhhhhhh
Q 024926 227 SWCAECQREKK 237 (260)
Q Consensus 227 ~~c~~c~~~~~ 237 (260)
.||+.|.....
T Consensus 30 ~~C~~C~~~~~ 40 (108)
T 2trx_A 30 EWCGPCKMIAP 40 (108)
T ss_dssp TTCHHHHHHHH
T ss_pred CCCHhHHHHHH
Confidence 68999965543
No 55
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=34.60 E-value=23 Score=32.61 Aligned_cols=79 Identities=18% Similarity=0.151 Sum_probs=0.0
Q ss_pred cccee-ecccchhHHHHHHHHHhhhhhhhhhCCCcCCCCCCccceeEEEEcCCCCCCccccccC------CeeeEEEeeC
Q 024926 74 KFGAV-LDDFGLETMLDKLMNDFIRPISKVFFPEVGGSTLDSHHGFVVEYGMDRDVELGFHVDD------SEVTLNVCLG 146 (260)
Q Consensus 74 ~ygvv-ldd~gl~~~~~~l~~~~l~Pl~~~lfp~~~~~~Lds~~~FvvrY~~~~d~~l~~H~D~------S~~TlnV~L~ 146 (260)
.|||+ +.++.++..-..-+.+.+.++....|+++..-.-+.... ..+-....+.||.|. ..+++.-|+.
T Consensus 147 ~~Gvv~frg~~~~~~~~~~~a~~~G~l~~~~~g~~~~v~~~~~~~----~~~yt~~~l~~HtD~sy~~~pp~~~~L~c~~ 222 (388)
T 3o2g_A 147 KVGIVRLTGASDKPGEVSKLGKRMGFLYLTFYGHTWQVQDKIDAN----NVAYTTGKLSFHTDYPALHHPPGVQLLHCIK 222 (388)
T ss_dssp HHSEEEEECCCSSTTHHHHHHHHHSCCCCBTTBSSEEESCCTTCS----SGGGSSSCEEEECSCTTSSSCCSEEEEEEEE
T ss_pred hcCEEEEeCCCCCHHHHHHHHHHhCCCccccCCCceEEeecCCcC----cccCccCCcccccCCCccCCCCcEEEEEEEe
Q ss_pred CceeccceEE
Q 024926 147 REFSGGELFF 156 (260)
Q Consensus 147 ~dfeGG~l~F 156 (260)
..=+||++.|
T Consensus 223 ~~~~GG~T~~ 232 (388)
T 3o2g_A 223 QTVTGGDSEI 232 (388)
T ss_dssp CCSSSCCEEE
T ss_pred cCCCCCcCee
No 56
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=34.22 E-value=11 Score=27.20 Aligned_cols=10 Identities=30% Similarity=1.179 Sum_probs=7.8
Q ss_pred cccchhhhhh
Q 024926 227 SWCAECQREK 236 (260)
Q Consensus 227 ~~c~~c~~~~ 236 (260)
.||+-|....
T Consensus 34 ~wC~~C~~~~ 43 (109)
T 3f3q_A 34 TWCGPCKMIA 43 (109)
T ss_dssp TTCHHHHHHH
T ss_pred CcCHhHHHHH
Confidence 7999996554
No 57
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=34.07 E-value=11 Score=26.73 Aligned_cols=12 Identities=25% Similarity=0.996 Sum_probs=8.6
Q ss_pred ccccchhhhhhh
Q 024926 226 SSWCAECQREKK 237 (260)
Q Consensus 226 ~~~c~~c~~~~~ 237 (260)
+.||+.|.....
T Consensus 33 ~~~C~~C~~~~~ 44 (112)
T 1ep7_A 33 ATWCGPCKMIAP 44 (112)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCCCHHHHHHHH
Confidence 369999965543
No 58
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=33.96 E-value=12 Score=27.55 Aligned_cols=12 Identities=42% Similarity=1.301 Sum_probs=8.7
Q ss_pred ccccchhhhhhh
Q 024926 226 SSWCAECQREKK 237 (260)
Q Consensus 226 ~~~c~~c~~~~~ 237 (260)
+.||+-|.....
T Consensus 36 a~wC~~C~~~~~ 47 (130)
T 2kuc_A 36 TTWCGPCKRLSK 47 (130)
T ss_dssp CTTCTHHHHHHH
T ss_pred CCCCccHHHHHH
Confidence 379999976543
No 59
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=33.76 E-value=11 Score=26.73 Aligned_cols=10 Identities=20% Similarity=0.435 Sum_probs=7.7
Q ss_pred cccchhhhhh
Q 024926 227 SWCAECQREK 236 (260)
Q Consensus 227 ~~c~~c~~~~ 236 (260)
.|||-|.+..
T Consensus 28 ~wC~~C~~~~ 37 (105)
T 4euy_A 28 ENCGVCDVML 37 (105)
T ss_dssp SSCHHHHHHH
T ss_pred CCCcchHHHH
Confidence 6999996643
No 60
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=33.74 E-value=11 Score=27.22 Aligned_cols=12 Identities=25% Similarity=1.038 Sum_probs=8.8
Q ss_pred ccccchhhhhhh
Q 024926 226 SSWCAECQREKK 237 (260)
Q Consensus 226 ~~~c~~c~~~~~ 237 (260)
+.||+.|.+...
T Consensus 42 a~wC~~C~~~~~ 53 (117)
T 2xc2_A 42 ATWCGPCKTIAP 53 (117)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCCCHhHHHHhH
Confidence 479999966543
No 61
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=33.63 E-value=12 Score=26.42 Aligned_cols=12 Identities=25% Similarity=0.947 Sum_probs=8.5
Q ss_pred ccccchhhhhhh
Q 024926 226 SSWCAECQREKK 237 (260)
Q Consensus 226 ~~~c~~c~~~~~ 237 (260)
+.|||.|.....
T Consensus 28 ~~~C~~C~~~~~ 39 (107)
T 1dby_A 28 APWCGPCRIIAP 39 (107)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCCCHhHHHHHH
Confidence 369999965543
No 62
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=33.55 E-value=12 Score=26.19 Aligned_cols=11 Identities=36% Similarity=1.072 Sum_probs=8.1
Q ss_pred cccchhhhhhh
Q 024926 227 SWCAECQREKK 237 (260)
Q Consensus 227 ~~c~~c~~~~~ 237 (260)
.||+.|.....
T Consensus 28 ~~C~~C~~~~~ 38 (109)
T 2yzu_A 28 EWCAPCRMIAP 38 (109)
T ss_dssp TTCHHHHHHHH
T ss_pred CCCHHHHHhhH
Confidence 68999965543
No 63
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=33.42 E-value=11 Score=25.83 Aligned_cols=12 Identities=17% Similarity=0.537 Sum_probs=9.2
Q ss_pred ccccchhhhhhh
Q 024926 226 SSWCAECQREKK 237 (260)
Q Consensus 226 ~~~c~~c~~~~~ 237 (260)
+.|||-|.+-+.
T Consensus 9 ~~~C~~C~~~~~ 20 (80)
T 2k8s_A 9 HAGCPVCVSAEQ 20 (80)
T ss_dssp ECSCHHHHHHHH
T ss_pred CCCCCchHHHHH
Confidence 479999976655
No 64
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=33.38 E-value=12 Score=26.60 Aligned_cols=12 Identities=25% Similarity=0.468 Sum_probs=8.7
Q ss_pred ccccchhhhhhh
Q 024926 226 SSWCAECQREKK 237 (260)
Q Consensus 226 ~~~c~~c~~~~~ 237 (260)
+.||+-|.....
T Consensus 30 a~wC~~C~~~~~ 41 (107)
T 1gh2_A 30 MRGCGPCLRIAP 41 (107)
T ss_dssp CSSCHHHHHHHH
T ss_pred CCCChhhHHHHH
Confidence 479999965443
No 65
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=33.31 E-value=12 Score=26.70 Aligned_cols=11 Identities=27% Similarity=1.138 Sum_probs=8.0
Q ss_pred cccchhhhhhh
Q 024926 227 SWCAECQREKK 237 (260)
Q Consensus 227 ~~c~~c~~~~~ 237 (260)
.||+.|.....
T Consensus 33 ~~C~~C~~~~~ 43 (112)
T 1t00_A 33 AWCGPCRQIAP 43 (112)
T ss_dssp TTCHHHHHHHH
T ss_pred CCCHhHHhcCH
Confidence 68999965543
No 66
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=33.29 E-value=12 Score=26.16 Aligned_cols=12 Identities=25% Similarity=1.010 Sum_probs=8.5
Q ss_pred ccccchhhhhhh
Q 024926 226 SSWCAECQREKK 237 (260)
Q Consensus 226 ~~~c~~c~~~~~ 237 (260)
+.||+.|.....
T Consensus 29 ~~~C~~C~~~~~ 40 (106)
T 1xwb_A 29 ATWCGPCKMISP 40 (106)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCcCHHHHHhhH
Confidence 469999965443
No 67
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=32.81 E-value=12 Score=27.20 Aligned_cols=11 Identities=18% Similarity=0.513 Sum_probs=8.3
Q ss_pred ccccchhhhhh
Q 024926 226 SSWCAECQREK 236 (260)
Q Consensus 226 ~~~c~~c~~~~ 236 (260)
+.|||-|.+..
T Consensus 38 a~wC~~C~~~~ 48 (118)
T 1zma_A 38 RKTCPYCRKFA 48 (118)
T ss_dssp CTTCHHHHHHH
T ss_pred CCCCccHHHHH
Confidence 47999997643
No 68
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=32.51 E-value=13 Score=26.37 Aligned_cols=10 Identities=50% Similarity=1.265 Sum_probs=7.6
Q ss_pred cccchhhhhh
Q 024926 227 SWCAECQREK 236 (260)
Q Consensus 227 ~~c~~c~~~~ 236 (260)
.||+.|....
T Consensus 35 ~~C~~C~~~~ 44 (115)
T 1thx_A 35 SWCGPCQLMS 44 (115)
T ss_dssp TTCTTHHHHH
T ss_pred CCCHHHHHhH
Confidence 6899996544
No 69
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=32.45 E-value=15 Score=27.03 Aligned_cols=11 Identities=45% Similarity=1.289 Sum_probs=8.3
Q ss_pred cccchhhhhhh
Q 024926 227 SWCAECQREKK 237 (260)
Q Consensus 227 ~~c~~c~~~~~ 237 (260)
.||+.|.....
T Consensus 45 ~wC~~C~~~~~ 55 (130)
T 2dml_A 45 PWCGHCQRLTP 55 (130)
T ss_dssp TTCSTTGGGHH
T ss_pred CCCHHHHhhCH
Confidence 69999976544
No 70
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=32.16 E-value=13 Score=26.83 Aligned_cols=11 Identities=36% Similarity=1.208 Sum_probs=8.2
Q ss_pred cccchhhhhhh
Q 024926 227 SWCAECQREKK 237 (260)
Q Consensus 227 ~~c~~c~~~~~ 237 (260)
.||+-|.....
T Consensus 36 ~~C~~C~~~~~ 46 (112)
T 1syr_A 36 EWCGPCKRIAP 46 (112)
T ss_dssp TTCHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 69999965543
No 71
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=32.11 E-value=13 Score=26.83 Aligned_cols=11 Identities=27% Similarity=0.851 Sum_probs=8.2
Q ss_pred cccchhhhhhh
Q 024926 227 SWCAECQREKK 237 (260)
Q Consensus 227 ~~c~~c~~~~~ 237 (260)
.|||-|.....
T Consensus 29 ~wC~~C~~~~~ 39 (110)
T 2l6c_A 29 NLCPHCKNMEK 39 (110)
T ss_dssp SSCSTHHHHHH
T ss_pred CCCHhHHHHHH
Confidence 69999976543
No 72
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=31.65 E-value=13 Score=26.23 Aligned_cols=10 Identities=30% Similarity=0.680 Sum_probs=7.5
Q ss_pred cccchhhhhh
Q 024926 227 SWCAECQREK 236 (260)
Q Consensus 227 ~~c~~c~~~~ 236 (260)
.||+.|....
T Consensus 32 ~~C~~C~~~~ 41 (111)
T 3gnj_A 32 KNCHVCQKVT 41 (111)
T ss_dssp SSCHHHHHHH
T ss_pred CCChhHHHHH
Confidence 6999996543
No 73
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.53 E-value=13 Score=27.28 Aligned_cols=11 Identities=36% Similarity=1.180 Sum_probs=8.2
Q ss_pred cccchhhhhhh
Q 024926 227 SWCAECQREKK 237 (260)
Q Consensus 227 ~~c~~c~~~~~ 237 (260)
.||+.|.+...
T Consensus 32 ~wC~~C~~~~p 42 (126)
T 1x5e_A 32 PWCPACQNLQP 42 (126)
T ss_dssp SSCHHHHHHHH
T ss_pred CCCHHHHHHhH
Confidence 69999966543
No 74
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=31.38 E-value=13 Score=26.94 Aligned_cols=11 Identities=36% Similarity=1.081 Sum_probs=8.2
Q ss_pred cccchhhhhhh
Q 024926 227 SWCAECQREKK 237 (260)
Q Consensus 227 ~~c~~c~~~~~ 237 (260)
.||+.|.....
T Consensus 31 ~~C~~C~~~~~ 41 (122)
T 3aps_A 31 PWCGPCQNFAP 41 (122)
T ss_dssp TTCHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 69999966443
No 75
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=31.25 E-value=13 Score=27.16 Aligned_cols=12 Identities=25% Similarity=0.780 Sum_probs=8.6
Q ss_pred ccccchhhhhhh
Q 024926 226 SSWCAECQREKK 237 (260)
Q Consensus 226 ~~~c~~c~~~~~ 237 (260)
+.||+-|.+...
T Consensus 40 a~wC~~C~~~~p 51 (116)
T 3qfa_C 40 ATWCGPSKMIKP 51 (116)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCCCHHHHHHHH
Confidence 479999965543
No 76
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=31.20 E-value=13 Score=27.54 Aligned_cols=11 Identities=27% Similarity=1.129 Sum_probs=8.1
Q ss_pred cccchhhhhhh
Q 024926 227 SWCAECQREKK 237 (260)
Q Consensus 227 ~~c~~c~~~~~ 237 (260)
.||+-|.+...
T Consensus 52 ~wC~~C~~~~p 62 (128)
T 3ul3_B 52 KWCQACTMQST 62 (128)
T ss_dssp TTCHHHHHHHH
T ss_pred CCCHHHHHHhH
Confidence 79999965543
No 77
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=31.13 E-value=13 Score=26.85 Aligned_cols=10 Identities=50% Similarity=1.421 Sum_probs=7.6
Q ss_pred cccchhhhhh
Q 024926 227 SWCAECQREK 236 (260)
Q Consensus 227 ~~c~~c~~~~ 236 (260)
.||+-|....
T Consensus 35 ~~C~~C~~~~ 44 (136)
T 1zzo_A 35 PWCPTCQGEA 44 (136)
T ss_dssp TTCHHHHHHH
T ss_pred CCChhHHHHH
Confidence 6899996543
No 78
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=31.10 E-value=13 Score=27.18 Aligned_cols=11 Identities=27% Similarity=1.132 Sum_probs=8.5
Q ss_pred cccchhhhhhh
Q 024926 227 SWCAECQREKK 237 (260)
Q Consensus 227 ~~c~~c~~~~~ 237 (260)
.||+-|.....
T Consensus 40 ~wC~~C~~~~p 50 (114)
T 2oe3_A 40 TWCGPCKMMQP 50 (114)
T ss_dssp TTCHHHHHTHH
T ss_pred CCCHHHHHHHH
Confidence 79999976554
No 79
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=30.80 E-value=1.4e+02 Score=21.13 Aligned_cols=30 Identities=17% Similarity=0.166 Sum_probs=23.3
Q ss_pred cCCCceEEEecCCCCcCccccCccceeEEEe
Q 024926 178 SHVPGYAVLHRGRHRHGARATTSGSRVNLLV 208 (260)
Q Consensus 178 ~~~~G~avlh~g~~~H~~~pVTsG~Ry~Lv~ 208 (260)
...+|++++.+....|...... ..++.++.
T Consensus 81 ~l~~Gd~~~ip~~~~H~~~~~~-~~~~~~v~ 110 (115)
T 1yhf_A 81 RVAEGQTIVMPAGIPHALYAVE-AFQMLLVV 110 (115)
T ss_dssp EEETTCEEEECTTSCEEEEESS-CEEEEEEE
T ss_pred EECCCCEEEECCCCCEEEEECC-CceEEEEE
Confidence 4688999999999999988765 45555443
No 80
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=30.67 E-value=14 Score=25.82 Aligned_cols=11 Identities=27% Similarity=0.993 Sum_probs=7.9
Q ss_pred cccchhhhhhh
Q 024926 227 SWCAECQREKK 237 (260)
Q Consensus 227 ~~c~~c~~~~~ 237 (260)
.||+.|.....
T Consensus 30 ~~C~~C~~~~~ 40 (107)
T 2i4a_A 30 EWCGPCKMIGP 40 (107)
T ss_dssp TTCHHHHHHHH
T ss_pred CCChhHHHHhH
Confidence 68999965443
No 81
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=30.63 E-value=14 Score=27.06 Aligned_cols=10 Identities=30% Similarity=1.085 Sum_probs=7.6
Q ss_pred cccchhhhhh
Q 024926 227 SWCAECQREK 236 (260)
Q Consensus 227 ~~c~~c~~~~ 236 (260)
.||+.|....
T Consensus 41 ~~C~~C~~~~ 50 (119)
T 1w4v_A 41 QWCGPCKILG 50 (119)
T ss_dssp TTCHHHHHHH
T ss_pred CCCHHHHHHH
Confidence 6899996544
No 82
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=30.35 E-value=14 Score=27.79 Aligned_cols=10 Identities=30% Similarity=1.228 Sum_probs=7.7
Q ss_pred ccccchhhhh
Q 024926 226 SSWCAECQRE 235 (260)
Q Consensus 226 ~~~c~~c~~~ 235 (260)
+.||+-|...
T Consensus 40 a~wC~~C~~~ 49 (134)
T 2fwh_A 40 ADWCVACKEF 49 (134)
T ss_dssp CTTCHHHHHH
T ss_pred CCCCHHHHHH
Confidence 3799999764
No 83
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=30.22 E-value=22 Score=27.00 Aligned_cols=22 Identities=32% Similarity=0.543 Sum_probs=14.4
Q ss_pred ccceeEEEeeccchhhhhhHhhhhhcccccchhhhh
Q 024926 200 SGSRVNLLVWCRSSVFRELKKYQKECSSWCAECQRE 235 (260)
Q Consensus 200 sG~Ry~Lv~w~rss~~R~~~~~~~~~~~~c~~c~~~ 235 (260)
.|.++.+|.|..+ .||+-|..+
T Consensus 34 ~gk~~vvl~F~~a--------------~~C~~C~~~ 55 (160)
T 1xvw_A 34 RGAKNVLLVFFPL--------------AFTGICQGE 55 (160)
T ss_dssp TTTCEEEEEECSC--------------TTSSHHHHH
T ss_pred cCCCCEEEEEECC--------------CCCCchHHH
Confidence 5666666665433 789999543
No 84
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=30.12 E-value=14 Score=27.14 Aligned_cols=11 Identities=45% Similarity=1.310 Sum_probs=8.1
Q ss_pred ccccchhhhhh
Q 024926 226 SSWCAECQREK 236 (260)
Q Consensus 226 ~~~c~~c~~~~ 236 (260)
+.||+.|....
T Consensus 32 a~wC~~C~~~~ 42 (118)
T 2f51_A 32 ATWCGPCQRLG 42 (118)
T ss_dssp CTTCHHHHHHH
T ss_pred CCCCHHHHHHH
Confidence 37999996543
No 85
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=30.11 E-value=14 Score=27.06 Aligned_cols=11 Identities=27% Similarity=0.583 Sum_probs=8.1
Q ss_pred cccchhhhhhh
Q 024926 227 SWCAECQREKK 237 (260)
Q Consensus 227 ~~c~~c~~~~~ 237 (260)
.||+-|.....
T Consensus 36 ~wC~~C~~~~~ 46 (126)
T 2l57_A 36 DTCPYCVEMQK 46 (126)
T ss_dssp SSCHHHHHHHH
T ss_pred CCCccHHHHHH
Confidence 79999965443
No 86
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=30.03 E-value=14 Score=27.34 Aligned_cols=12 Identities=33% Similarity=1.229 Sum_probs=8.9
Q ss_pred ccccchhhhhhh
Q 024926 226 SSWCAECQREKK 237 (260)
Q Consensus 226 ~~~c~~c~~~~~ 237 (260)
+.||+-|.+...
T Consensus 38 a~wC~~C~~~~~ 49 (133)
T 3fk8_A 38 ANWCTDCRALDK 49 (133)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCCCHHHHHHHH
Confidence 479999976544
No 87
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=30.02 E-value=2.3e+02 Score=23.66 Aligned_cols=53 Identities=13% Similarity=0.123 Sum_probs=32.1
Q ss_pred ecCCCceEEEecCCCCcCccccCccceeEEEeeccchhhhhhHhhhhhcccccchhhhhh
Q 024926 177 YSHVPGYAVLHRGRHRHGARATTSGSRVNLLVWCRSSVFRELKKYQKECSSWCAECQREK 236 (260)
Q Consensus 177 ~~~~~G~avlh~g~~~H~~~pVTsG~Ry~Lv~w~rss~~R~~~~~~~~~~~~c~~c~~~~ 236 (260)
+..++|...+-|....|..... .++--.+|-=-|..- -...|.-.|+.|...-
T Consensus 82 v~i~eGdmfllP~gvpHsP~r~-~e~v~lviErkR~~~------~~D~~~wyc~~c~~~~ 134 (176)
T 1zvf_A 82 IIINEGDSYLLPGNVPHSPVRF-ADTVGIVVEQDRPGG------ENDKIRWYCSHCRQVV 134 (176)
T ss_dssp EEECTTEEEEECTTCCEEEEEC-TTCEEEEEEECCCSS------SCCEEEEECTTTCCEE
T ss_pred EEECCCCEEEcCCCCCcCCccc-CCcEEEEEEecCCCC------CccceEEEcCCCCCEE
Confidence 3568899999999999988554 333333333333221 1134555688886543
No 88
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=29.83 E-value=15 Score=27.00 Aligned_cols=11 Identities=27% Similarity=1.032 Sum_probs=8.1
Q ss_pred cccchhhhhhh
Q 024926 227 SWCAECQREKK 237 (260)
Q Consensus 227 ~~c~~c~~~~~ 237 (260)
.||+.|.....
T Consensus 43 ~~C~~C~~~~~ 53 (121)
T 2j23_A 43 TWCGPCKMIGP 53 (121)
T ss_dssp TTCSTHHHHHH
T ss_pred CCCHhHHHHHH
Confidence 69999965543
No 89
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=29.70 E-value=15 Score=27.41 Aligned_cols=12 Identities=33% Similarity=0.974 Sum_probs=8.8
Q ss_pred ccccchhhhhhh
Q 024926 226 SSWCAECQREKK 237 (260)
Q Consensus 226 ~~~c~~c~~~~~ 237 (260)
+.||+-|.....
T Consensus 47 a~wC~~C~~~~~ 58 (124)
T 1xfl_A 47 ASWCGPCRFIAP 58 (124)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCCCHHHHHHHH
Confidence 479999966543
No 90
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=29.59 E-value=15 Score=26.78 Aligned_cols=10 Identities=40% Similarity=1.242 Sum_probs=7.5
Q ss_pred cccchhhhhh
Q 024926 227 SWCAECQREK 236 (260)
Q Consensus 227 ~~c~~c~~~~ 236 (260)
.||+-|....
T Consensus 34 ~~C~~C~~~~ 43 (136)
T 1lu4_A 34 PWCPFCNAEA 43 (136)
T ss_dssp TTCHHHHHHH
T ss_pred CcChhHHHHH
Confidence 6899996543
No 91
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=29.59 E-value=2.4e+02 Score=23.40 Aligned_cols=92 Identities=17% Similarity=0.181 Sum_probs=49.9
Q ss_pred eEEEEcCCCCCCccccccCCeeeEEEeeCC---ceec-cceEEecccccccccccccccccceecCCCceEEEecCCCCc
Q 024926 118 FVVEYGMDRDVELGFHVDDSEVTLNVCLGR---EFSG-GELFFRGVRCDKHVNTETQSEEILDYSHVPGYAVLHRGRHRH 193 (260)
Q Consensus 118 FvvrY~~~~d~~l~~H~D~S~~TlnV~L~~---dfeG-G~l~F~~~~~~~~v~~~~~~~~~~~~~~~~G~avlh~g~~~H 193 (260)
|.|---.+....+.||++.++-.+-|-=|+ ++.+ |. |. ++..++|..++-|....|
T Consensus 36 ~~V~~v~Gpn~r~d~H~h~~dE~FyvlkG~m~i~v~d~g~--~~------------------~v~l~eGE~f~lP~gvpH 95 (174)
T 1yfu_A 36 FIVTVVGGPNHRTDYHDDPLEEFFYQLRGNAYLNLWVDGR--RE------------------RADLKEGDIFLLPPHVRH 95 (174)
T ss_dssp EEEEEECSCBCCCCEEECSSCEEEEEEESCEEEEEEETTE--EE------------------EEEECTTCEEEECTTCCE
T ss_pred EEEEEEcCCCcCccCcCCCCceEEEEEeeEEEEEEEcCCc--ee------------------eEEECCCCEEEeCCCCCc
Confidence 444444455568999999876444442222 2222 11 11 234688999999999999
Q ss_pred CccccCccceeEEEeeccchhhhhhHhhhhhcccccchhhhh
Q 024926 194 GARATTSGSRVNLLVWCRSSVFRELKKYQKECSSWCAECQRE 235 (260)
Q Consensus 194 ~~~pVTsG~Ry~Lv~w~rss~~R~~~~~~~~~~~~c~~c~~~ 235 (260)
....-..+..-.||-=-|..- -...|.-.|+.|...
T Consensus 96 ~P~r~~~e~~~lviE~~r~~~------~~d~~~wyc~~c~~~ 131 (174)
T 1yfu_A 96 SPQRPEAGSACLVIERQRPAG------MLDGFEWYCDACGHL 131 (174)
T ss_dssp EEEBCCTTCEEEEEEECCCTT------CCEEEEEECTTTCCE
T ss_pred CccccCCCCEEEEEEeCCCCC------CccceEEEcCCCCCE
Confidence 765432133333333222221 113455568888653
No 92
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=29.38 E-value=16 Score=27.35 Aligned_cols=10 Identities=30% Similarity=1.172 Sum_probs=7.6
Q ss_pred cccchhhhhh
Q 024926 227 SWCAECQREK 236 (260)
Q Consensus 227 ~~c~~c~~~~ 236 (260)
.||+.|....
T Consensus 61 ~wC~~C~~~~ 70 (141)
T 3hxs_A 61 DWCGPCKMVA 70 (141)
T ss_dssp TTCTTHHHHH
T ss_pred CCCHHHHHHH
Confidence 6899996543
No 93
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=29.36 E-value=16 Score=26.99 Aligned_cols=11 Identities=27% Similarity=1.189 Sum_probs=8.1
Q ss_pred cccchhhhhhh
Q 024926 227 SWCAECQREKK 237 (260)
Q Consensus 227 ~~c~~c~~~~~ 237 (260)
.||+-|.....
T Consensus 35 ~wC~~C~~~~p 45 (133)
T 2dj3_A 35 PWCGHCKQLEP 45 (133)
T ss_dssp TTCSHHHHHHH
T ss_pred CCChhHHHHHH
Confidence 69999965543
No 94
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=29.33 E-value=13 Score=27.87 Aligned_cols=9 Identities=22% Similarity=0.623 Sum_probs=7.3
Q ss_pred cccchhhhh
Q 024926 227 SWCAECQRE 235 (260)
Q Consensus 227 ~~c~~c~~~ 235 (260)
.||+-|..+
T Consensus 41 ~wC~~C~~~ 49 (142)
T 3eur_A 41 PGCHACAEM 49 (142)
T ss_dssp SSSHHHHHH
T ss_pred CCCccHHHH
Confidence 799999655
No 95
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=35.45 E-value=11 Score=25.99 Aligned_cols=11 Identities=27% Similarity=1.020 Sum_probs=8.2
Q ss_pred cccchhhhhhh
Q 024926 227 SWCAECQREKK 237 (260)
Q Consensus 227 ~~c~~c~~~~~ 237 (260)
.||+.|.....
T Consensus 29 ~~C~~C~~~~~ 39 (106)
T 2yj7_A 29 PWCGPCRMIAP 39 (106)
Confidence 68999976543
No 96
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.21 E-value=15 Score=26.92 Aligned_cols=11 Identities=27% Similarity=1.153 Sum_probs=8.1
Q ss_pred cccchhhhhhh
Q 024926 227 SWCAECQREKK 237 (260)
Q Consensus 227 ~~c~~c~~~~~ 237 (260)
.||+-|.....
T Consensus 35 ~wC~~C~~~~~ 45 (133)
T 1x5d_A 35 PWCGHCKNLEP 45 (133)
T ss_dssp TTCHHHHTHHH
T ss_pred CCCHHHHhhcH
Confidence 69999965443
No 97
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=29.14 E-value=15 Score=27.61 Aligned_cols=11 Identities=27% Similarity=1.047 Sum_probs=8.3
Q ss_pred cccchhhhhhh
Q 024926 227 SWCAECQREKK 237 (260)
Q Consensus 227 ~~c~~c~~~~~ 237 (260)
.||+-|.....
T Consensus 48 ~wC~~C~~~~~ 58 (136)
T 2l5l_A 48 DWCGPCKMVAP 58 (136)
T ss_dssp TTSHHHHHHHH
T ss_pred CcCHHHHHHHH
Confidence 69999966543
No 98
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=28.97 E-value=15 Score=26.66 Aligned_cols=11 Identities=36% Similarity=1.047 Sum_probs=8.3
Q ss_pred cccchhhhhhh
Q 024926 227 SWCAECQREKK 237 (260)
Q Consensus 227 ~~c~~c~~~~~ 237 (260)
.|||-|.+.+.
T Consensus 28 ~~C~~C~~~~~ 38 (116)
T 2e7p_A 28 TYCGYCNRVKQ 38 (116)
T ss_dssp TTCHHHHHHHH
T ss_pred CCChhHHHHHH
Confidence 79999975543
No 99
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=28.97 E-value=15 Score=25.92 Aligned_cols=11 Identities=36% Similarity=1.120 Sum_probs=8.0
Q ss_pred ccccchhhhhh
Q 024926 226 SSWCAECQREK 236 (260)
Q Consensus 226 ~~~c~~c~~~~ 236 (260)
+.||+.|....
T Consensus 35 ~~~C~~C~~~~ 45 (113)
T 1ti3_A 35 ASWCPPCKMIA 45 (113)
T ss_dssp CSSCHHHHHHH
T ss_pred CCCCHHHHHHH
Confidence 36999996544
No 100
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=28.87 E-value=13 Score=27.56 Aligned_cols=9 Identities=22% Similarity=0.759 Sum_probs=7.5
Q ss_pred cccchhhhh
Q 024926 227 SWCAECQRE 235 (260)
Q Consensus 227 ~~c~~c~~~ 235 (260)
.|||-|...
T Consensus 37 ~~C~~C~~~ 45 (142)
T 3ewl_A 37 PDCSNCRKF 45 (142)
T ss_dssp SSCHHHHHH
T ss_pred CCCccHHHH
Confidence 689999765
No 101
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=28.83 E-value=19 Score=26.98 Aligned_cols=11 Identities=36% Similarity=1.214 Sum_probs=8.1
Q ss_pred cccchhhhhhh
Q 024926 227 SWCAECQREKK 237 (260)
Q Consensus 227 ~~c~~c~~~~~ 237 (260)
.||+.|.....
T Consensus 40 ~~C~~C~~~~~ 50 (152)
T 2lja_A 40 TWCGPCRGELP 50 (152)
T ss_dssp SSCCGGGGTHH
T ss_pred CcCHhHHHHhH
Confidence 68999965443
No 102
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=28.79 E-value=16 Score=26.54 Aligned_cols=12 Identities=33% Similarity=1.016 Sum_probs=8.5
Q ss_pred ccccchhhhhhh
Q 024926 226 SSWCAECQREKK 237 (260)
Q Consensus 226 ~~~c~~c~~~~~ 237 (260)
+.||+.|.....
T Consensus 43 ~~~C~~C~~~~~ 54 (122)
T 2vlu_A 43 ASWCGPCRIMAP 54 (122)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCCCHHHHHHHH
Confidence 379999965543
No 103
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=28.70 E-value=16 Score=27.03 Aligned_cols=11 Identities=9% Similarity=0.419 Sum_probs=8.2
Q ss_pred cccchhhhhhh
Q 024926 227 SWCAECQREKK 237 (260)
Q Consensus 227 ~~c~~c~~~~~ 237 (260)
.||+-|.+...
T Consensus 43 ~wC~~C~~~~p 53 (127)
T 3h79_A 43 PWSRHSVAAMR 53 (127)
T ss_dssp TTCHHHHHHHH
T ss_pred CccHHHHHHhH
Confidence 79999966443
No 104
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=28.32 E-value=1.5e+02 Score=26.10 Aligned_cols=31 Identities=13% Similarity=0.213 Sum_probs=24.3
Q ss_pred CCccccccCC------eeeEEEeeCCceeccceEEec
Q 024926 128 VELGFHVDDS------EVTLNVCLGREFSGGELFFRG 158 (260)
Q Consensus 128 ~~l~~H~D~S------~~TlnV~L~~dfeGG~l~F~~ 158 (260)
..+.||.|.| .+++.-|+.-.=+||+|.|..
T Consensus 98 ~~~~wH~D~s~~~~pp~~~~l~~~~~p~~GG~T~fad 134 (301)
T 3r1j_A 98 KATRWHTDVTFAANYPAASILRAVTLPSYGGSTLWAS 134 (301)
T ss_dssp -CCSCBCTTTTSSSCCSEEEEEEEECCSSCCCEEEEE
T ss_pred CCCCCccccCCccCCCceeEEEEeecCCCCCCCeeEc
Confidence 4688999987 478888886555899999975
No 105
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=28.32 E-value=16 Score=26.06 Aligned_cols=12 Identities=33% Similarity=1.007 Sum_probs=8.5
Q ss_pred ccccchhhhhhh
Q 024926 226 SSWCAECQREKK 237 (260)
Q Consensus 226 ~~~c~~c~~~~~ 237 (260)
+.||+.|.....
T Consensus 37 ~~~C~~C~~~~~ 48 (118)
T 2vm1_A 37 ASWCGPCRVIAP 48 (118)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCCCHhHHHHhH
Confidence 369999965543
No 106
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=28.10 E-value=16 Score=27.72 Aligned_cols=11 Identities=36% Similarity=1.232 Sum_probs=8.1
Q ss_pred cccchhhhhhh
Q 024926 227 SWCAECQREKK 237 (260)
Q Consensus 227 ~~c~~c~~~~~ 237 (260)
.||+.|...-.
T Consensus 44 ~~C~~C~~~~~ 54 (165)
T 3or5_A 44 TWCPPCRSEIP 54 (165)
T ss_dssp TTSHHHHHHHH
T ss_pred CcCHHHHHHHH
Confidence 68999966543
No 107
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=28.08 E-value=16 Score=26.78 Aligned_cols=10 Identities=50% Similarity=1.494 Sum_probs=7.6
Q ss_pred cccchhhhhh
Q 024926 227 SWCAECQREK 236 (260)
Q Consensus 227 ~~c~~c~~~~ 236 (260)
.||+-|....
T Consensus 44 ~~C~~C~~~~ 53 (145)
T 3erw_A 44 SWCPPCKKEL 53 (145)
T ss_dssp SSCHHHHHHH
T ss_pred CCCHHHHHHH
Confidence 6899996543
No 108
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=27.97 E-value=16 Score=26.17 Aligned_cols=9 Identities=44% Similarity=1.324 Sum_probs=7.0
Q ss_pred cccchhhhh
Q 024926 227 SWCAECQRE 235 (260)
Q Consensus 227 ~~c~~c~~~ 235 (260)
.||+.|...
T Consensus 32 ~~C~~C~~~ 40 (138)
T 4evm_A 32 SWCSICLAS 40 (138)
T ss_dssp TTCHHHHHH
T ss_pred CcCHHHHHH
Confidence 789999544
No 109
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=27.93 E-value=14 Score=28.70 Aligned_cols=13 Identities=15% Similarity=0.215 Sum_probs=9.7
Q ss_pred ccccchhhhhhhH
Q 024926 226 SSWCAECQREKKE 238 (260)
Q Consensus 226 ~~~c~~c~~~~~~ 238 (260)
|.|||-|.+-...
T Consensus 33 atwCgpc~~~~~~ 45 (112)
T 3iv4_A 33 SETCPISANAYDQ 45 (112)
T ss_dssp CTTCHHHHHHHHH
T ss_pred CCcCHhHHHHHHH
Confidence 6799999775444
No 110
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=27.90 E-value=14 Score=27.23 Aligned_cols=10 Identities=30% Similarity=1.228 Sum_probs=7.7
Q ss_pred ccccchhhhh
Q 024926 226 SSWCAECQRE 235 (260)
Q Consensus 226 ~~~c~~c~~~ 235 (260)
+.|||-|.+-
T Consensus 29 a~wC~~C~~~ 38 (105)
T 3zzx_A 29 ATWCGPCKMI 38 (105)
T ss_dssp CTTCHHHHHH
T ss_pred CCCCCCccCC
Confidence 4799999654
No 111
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=27.70 E-value=16 Score=27.49 Aligned_cols=11 Identities=36% Similarity=0.836 Sum_probs=8.2
Q ss_pred ccccchhhhhh
Q 024926 226 SSWCAECQREK 236 (260)
Q Consensus 226 ~~~c~~c~~~~ 236 (260)
+.|||-|....
T Consensus 40 a~wC~~C~~~~ 50 (135)
T 3emx_A 40 SKTCPHCHRDW 50 (135)
T ss_dssp ETTCHHHHHHH
T ss_pred CCcCHhhhHhC
Confidence 37999996653
No 112
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.35 E-value=18 Score=27.08 Aligned_cols=12 Identities=25% Similarity=0.772 Sum_probs=9.0
Q ss_pred ccccchhhhhhh
Q 024926 226 SSWCAECQREKK 237 (260)
Q Consensus 226 ~~~c~~c~~~~~ 237 (260)
+.||+-|.....
T Consensus 35 a~wC~~C~~~~p 46 (137)
T 2dj0_A 35 ANWSNDCQSFAP 46 (137)
T ss_dssp CTTCSTTTTTHH
T ss_pred CCCCHHHHHHHH
Confidence 479999976544
No 113
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=27.35 E-value=17 Score=27.29 Aligned_cols=9 Identities=56% Similarity=1.608 Sum_probs=7.1
Q ss_pred cccchhhhh
Q 024926 227 SWCAECQRE 235 (260)
Q Consensus 227 ~~c~~c~~~ 235 (260)
.||+.|...
T Consensus 52 ~~C~~C~~~ 60 (156)
T 1kng_A 52 SWCVPCHDE 60 (156)
T ss_dssp TTCHHHHHH
T ss_pred ccCHhHHHH
Confidence 789999654
No 114
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=27.20 E-value=17 Score=27.00 Aligned_cols=11 Identities=27% Similarity=1.108 Sum_probs=8.2
Q ss_pred cccchhhhhhh
Q 024926 227 SWCAECQREKK 237 (260)
Q Consensus 227 ~~c~~c~~~~~ 237 (260)
.||+.|.....
T Consensus 44 ~wC~~C~~~~p 54 (140)
T 2dj1_A 44 PWCGHCKQFAP 54 (140)
T ss_dssp TTCHHHHTTHH
T ss_pred CCCHHHHHhhH
Confidence 68999966543
No 115
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=27.10 E-value=17 Score=28.19 Aligned_cols=12 Identities=33% Similarity=0.991 Sum_probs=8.9
Q ss_pred ccccchhhhhhh
Q 024926 226 SSWCAECQREKK 237 (260)
Q Consensus 226 ~~~c~~c~~~~~ 237 (260)
+.|||-|.....
T Consensus 57 a~wC~~C~~~~p 68 (154)
T 2ju5_A 57 SDWCMWCIKMQD 68 (154)
T ss_dssp TTTCHHHHHHHH
T ss_pred CCCCHhHHHHHH
Confidence 489999976543
No 116
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=27.08 E-value=17 Score=26.73 Aligned_cols=9 Identities=22% Similarity=0.600 Sum_probs=7.0
Q ss_pred cccchhhhh
Q 024926 227 SWCAECQRE 235 (260)
Q Consensus 227 ~~c~~c~~~ 235 (260)
.||+-|...
T Consensus 39 ~~C~~C~~~ 47 (148)
T 2b5x_A 39 ISCHLCKEA 47 (148)
T ss_dssp TTCHHHHHH
T ss_pred CCCHHHHHH
Confidence 689999654
No 117
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=27.07 E-value=18 Score=26.66 Aligned_cols=11 Identities=45% Similarity=0.930 Sum_probs=8.2
Q ss_pred cccchhhhhhh
Q 024926 227 SWCAECQREKK 237 (260)
Q Consensus 227 ~~c~~c~~~~~ 237 (260)
.||+.|...-.
T Consensus 41 ~~C~~C~~~~~ 51 (148)
T 3hcz_A 41 SQCGHCQQETP 51 (148)
T ss_dssp GGGCTTCSHHH
T ss_pred CCCccHHHHHH
Confidence 78999976543
No 118
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=26.95 E-value=17 Score=27.18 Aligned_cols=12 Identities=17% Similarity=0.656 Sum_probs=8.8
Q ss_pred ccccchhhhhhh
Q 024926 226 SSWCAECQREKK 237 (260)
Q Consensus 226 ~~~c~~c~~~~~ 237 (260)
+.||+-|.....
T Consensus 49 a~wC~~C~~~~p 60 (128)
T 2o8v_B 49 AEWCGPAKMIAP 60 (128)
T ss_dssp CSSCHHHHHTHH
T ss_pred CCCCHHHHHHhH
Confidence 479999966543
No 119
>1ds1_A Clavaminate synthase 1; oxygenase, trifunctional enzyme, oxidoreductase,lyase; HET: AKG; 1.08A {Streptomyces clavuligerus} SCOP: b.82.2.2 PDB: 1drt_A* 1ds0_A 1dry_A* 1gvg_A*
Probab=26.93 E-value=31 Score=30.53 Aligned_cols=33 Identities=18% Similarity=0.331 Sum_probs=26.2
Q ss_pred CCccccccCC------eeeEEEeeCCcee-ccceEEeccc
Q 024926 128 VELGFHVDDS------EVTLNVCLGREFS-GGELFFRGVR 160 (260)
Q Consensus 128 ~~l~~H~D~S------~~TlnV~L~~dfe-GG~l~F~~~~ 160 (260)
..+.||.|.+ .+++.-||...=+ ||.|.|.+..
T Consensus 139 ~~l~~HtD~sy~~~pP~~~~L~c~~~~~~GGg~T~~~~~~ 178 (324)
T 1ds1_A 139 TLLEFHTEMAYHRLQPNYVMLACSRADHERTAATLVASVR 178 (324)
T ss_dssp SCEEEECTTTTBTTCCSEEEEEEEECCTTCCCCEEEEEHH
T ss_pred CcccccccCCCCCCCCCeEEEEEeecCccCCceEEEeeHH
Confidence 4789999998 7899999964444 8889987643
No 120
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=26.64 E-value=18 Score=26.00 Aligned_cols=11 Identities=27% Similarity=1.078 Sum_probs=8.1
Q ss_pred cccchhhhhhh
Q 024926 227 SWCAECQREKK 237 (260)
Q Consensus 227 ~~c~~c~~~~~ 237 (260)
.||+.|.....
T Consensus 40 ~~C~~C~~~~~ 50 (121)
T 2i1u_A 40 TWCGPCKMVAP 50 (121)
T ss_dssp TTCHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 68999965544
No 121
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=26.64 E-value=16 Score=26.59 Aligned_cols=12 Identities=33% Similarity=0.974 Sum_probs=8.8
Q ss_pred ccccchhhhhhh
Q 024926 226 SSWCAECQREKK 237 (260)
Q Consensus 226 ~~~c~~c~~~~~ 237 (260)
+.||+.|.....
T Consensus 45 ~~~C~~C~~~~~ 56 (130)
T 1wmj_A 45 ASWCGPCRFIAP 56 (130)
T ss_dssp SSSCSCSSSSHH
T ss_pred CCCChhHHHHHH
Confidence 379999976544
No 122
>3uws_A Hypothetical protein; clostripain family protein, peptidase_C11, structural genomi center for structural genomics, JCSG; HET: MSE; 1.70A {Parabacteroides merdae}
Probab=26.64 E-value=23 Score=27.82 Aligned_cols=26 Identities=8% Similarity=0.240 Sum_probs=19.4
Q ss_pred CcCccccCccceeEEEeeccchhhhh
Q 024926 192 RHGARATTSGSRVNLLVWCRSSVFRE 217 (260)
Q Consensus 192 ~H~~~pVTsG~Ry~Lv~w~rss~~R~ 217 (260)
+-.+.....=.+|.||+|++++.|.-
T Consensus 93 l~~~~~~~PA~~y~LIlw~HG~GW~p 118 (126)
T 3uws_A 93 IGEVVSQYPADSYGLVLWSHGTAWLP 118 (126)
T ss_dssp HHHHHHHSCEEEEEEEEESCBCTTCC
T ss_pred HHHHHHhCCccceEEEEEeCCCcCcC
Confidence 33444556668999999999997764
No 123
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=26.63 E-value=18 Score=27.02 Aligned_cols=12 Identities=17% Similarity=0.722 Sum_probs=8.7
Q ss_pred ccccchhhhhhh
Q 024926 226 SSWCAECQREKK 237 (260)
Q Consensus 226 ~~~c~~c~~~~~ 237 (260)
+.||+-|.....
T Consensus 55 a~wC~~C~~~~~ 66 (139)
T 3d22_A 55 ARWCGPSRQIAP 66 (139)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCCCHHHHHHHH
Confidence 479999965543
No 124
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=26.55 E-value=18 Score=27.33 Aligned_cols=11 Identities=36% Similarity=1.220 Sum_probs=8.2
Q ss_pred ccccchhhhhh
Q 024926 226 SSWCAECQREK 236 (260)
Q Consensus 226 ~~~c~~c~~~~ 236 (260)
+.||+-|....
T Consensus 49 a~wC~~C~~~~ 59 (133)
T 3cxg_A 49 AVWCKPCNKIK 59 (133)
T ss_dssp CTTCHHHHHTH
T ss_pred CCCCHHHHHHH
Confidence 36999997653
No 125
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=26.54 E-value=15 Score=27.76 Aligned_cols=9 Identities=22% Similarity=0.652 Sum_probs=7.3
Q ss_pred cccchhhhh
Q 024926 227 SWCAECQRE 235 (260)
Q Consensus 227 ~~c~~c~~~ 235 (260)
.||+-|..+
T Consensus 38 ~wC~~C~~~ 46 (158)
T 3eyt_A 38 MLCPGCVMH 46 (158)
T ss_dssp TTCHHHHHT
T ss_pred CcCcchhhh
Confidence 689999764
No 126
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=26.46 E-value=15 Score=29.64 Aligned_cols=11 Identities=36% Similarity=1.153 Sum_probs=8.4
Q ss_pred ccccchhhhhh
Q 024926 226 SSWCAECQREK 236 (260)
Q Consensus 226 ~~~c~~c~~~~ 236 (260)
.+|||-|.+..
T Consensus 63 A~WC~pC~~~~ 73 (167)
T 1z6n_A 63 EMWCPDCQINL 73 (167)
T ss_dssp CTTCHHHHHHH
T ss_pred CCCChhHHHHH
Confidence 38999997654
No 127
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=26.43 E-value=19 Score=26.60 Aligned_cols=10 Identities=30% Similarity=0.856 Sum_probs=7.5
Q ss_pred cccchhhhhh
Q 024926 227 SWCAECQREK 236 (260)
Q Consensus 227 ~~c~~c~~~~ 236 (260)
.||+-|...-
T Consensus 43 ~~C~~C~~~~ 52 (148)
T 3fkf_A 43 SWCDPQPEAN 52 (148)
T ss_dssp GGGCCCHHHH
T ss_pred CCCHHHHHHh
Confidence 6899996543
No 128
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=26.29 E-value=18 Score=24.50 Aligned_cols=11 Identities=45% Similarity=0.779 Sum_probs=8.5
Q ss_pred cccchhhhhhh
Q 024926 227 SWCAECQREKK 237 (260)
Q Consensus 227 ~~c~~c~~~~~ 237 (260)
.|||-|.+-+.
T Consensus 9 ~~C~~C~~~~~ 19 (85)
T 1ego_A 9 SGCPYCVRAKD 19 (85)
T ss_dssp TTSTHHHHHHH
T ss_pred CCCCCHHHHHH
Confidence 79999976554
No 129
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=26.12 E-value=18 Score=27.29 Aligned_cols=10 Identities=40% Similarity=1.501 Sum_probs=7.7
Q ss_pred cccchhhhhh
Q 024926 227 SWCAECQREK 236 (260)
Q Consensus 227 ~~c~~c~~~~ 236 (260)
.|||-|...-
T Consensus 34 ~wC~~C~~~~ 43 (151)
T 3raz_A 34 TWCGPCRKEM 43 (151)
T ss_dssp TTCHHHHHHH
T ss_pred CcCHHHHHHH
Confidence 6899996544
No 130
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=26.08 E-value=18 Score=28.08 Aligned_cols=12 Identities=8% Similarity=0.025 Sum_probs=8.7
Q ss_pred ccccchhhhhhh
Q 024926 226 SSWCAECQREKK 237 (260)
Q Consensus 226 ~~~c~~c~~~~~ 237 (260)
+.||+-|.+...
T Consensus 32 a~WC~~C~~~~p 43 (149)
T 3gix_A 32 RDEDPVCLQLDD 43 (149)
T ss_dssp CTTSHHHHHHHH
T ss_pred CCCCHHHHHHHH
Confidence 489999966443
No 131
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=25.65 E-value=16 Score=27.60 Aligned_cols=9 Identities=22% Similarity=0.726 Sum_probs=7.1
Q ss_pred cccchhhhh
Q 024926 227 SWCAECQRE 235 (260)
Q Consensus 227 ~~c~~c~~~ 235 (260)
.||+-|..+
T Consensus 40 ~~C~~C~~e 48 (160)
T 3lor_A 40 MLCPGCVNH 48 (160)
T ss_dssp TTCHHHHHT
T ss_pred CCCcchhhh
Confidence 689999753
No 132
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=25.55 E-value=19 Score=27.22 Aligned_cols=10 Identities=20% Similarity=0.584 Sum_probs=7.5
Q ss_pred cccchhhhhh
Q 024926 227 SWCAECQREK 236 (260)
Q Consensus 227 ~~c~~c~~~~ 236 (260)
.||+.|....
T Consensus 34 ~wC~~C~~~~ 43 (140)
T 3hz4_A 34 PACPYCKAME 43 (140)
T ss_dssp TTCHHHHHHH
T ss_pred CCChhHHHHH
Confidence 6999996543
No 133
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=25.37 E-value=19 Score=26.84 Aligned_cols=10 Identities=30% Similarity=0.830 Sum_probs=7.4
Q ss_pred cccchhhhhh
Q 024926 227 SWCAECQREK 236 (260)
Q Consensus 227 ~~c~~c~~~~ 236 (260)
.||+-|....
T Consensus 38 ~wC~~C~~~~ 47 (144)
T 1i5g_A 38 SWCPPSRAFT 47 (144)
T ss_dssp TTCHHHHHHH
T ss_pred CCCHHHHHHH
Confidence 6899996543
No 134
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=31.11 E-value=15 Score=27.14 Aligned_cols=10 Identities=30% Similarity=1.115 Sum_probs=7.6
Q ss_pred cccchhhhhh
Q 024926 227 SWCAECQREK 236 (260)
Q Consensus 227 ~~c~~c~~~~ 236 (260)
.|||-|....
T Consensus 36 ~wC~~C~~~~ 45 (143)
T 2lus_A 36 HWCPPCRGFT 45 (143)
Confidence 6899996543
No 135
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=25.19 E-value=19 Score=28.01 Aligned_cols=10 Identities=20% Similarity=0.690 Sum_probs=7.9
Q ss_pred ccccchhhhh
Q 024926 226 SSWCAECQRE 235 (260)
Q Consensus 226 ~~~c~~c~~~ 235 (260)
.+||+-|.+.
T Consensus 56 A~WC~~C~~~ 65 (172)
T 3f9u_A 56 GYGCVNCRKM 65 (172)
T ss_dssp CTTCHHHHHH
T ss_pred CCCCHHHHHH
Confidence 3799999763
No 136
>2og5_A Putative oxygenase; non-ribosomal peptide synthesis, iron(II)/alpha-ketoglutarat dependent hydroxylase, jelly-roll fold; 1.45A {Streptomyces coelicolor} PDB: 2og6_A 2og7_A*
Probab=24.77 E-value=31 Score=31.10 Aligned_cols=30 Identities=20% Similarity=0.394 Sum_probs=24.5
Q ss_pred CCccccccCC------eeeEEEeeCCceeccceEEe
Q 024926 128 VELGFHVDDS------EVTLNVCLGREFSGGELFFR 157 (260)
Q Consensus 128 ~~l~~H~D~S------~~TlnV~L~~dfeGG~l~F~ 157 (260)
..+.||.|.+ .+++.-||...=+||++.|.
T Consensus 174 ~~l~~HtD~sy~~~pP~~~~L~cl~~~~~GG~t~~~ 209 (357)
T 2og5_A 174 TLLTFHNENAFHEHRPDFVMLLCLRADPTGRAGLRT 209 (357)
T ss_dssp SCEEEECTTTTCTTCCSEEEEEEEECCTTSCCCEEE
T ss_pred ccccccccCCCCCCCCCeEEEEEEccCCCCCccEEE
Confidence 4688999998 79999999766679986654
No 137
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=24.55 E-value=1.7e+02 Score=24.17 Aligned_cols=33 Identities=15% Similarity=0.181 Sum_probs=26.4
Q ss_pred ecCCCceEEEecCCCCcCccccCccceeEEEee
Q 024926 177 YSHVPGYAVLHRGRHRHGARATTSGSRVNLLVW 209 (260)
Q Consensus 177 ~~~~~G~avlh~g~~~H~~~pVTsG~Ry~Lv~w 209 (260)
+...+|++++.|....|.........++.++++
T Consensus 193 ~~l~~Gd~i~ip~~~~H~~~~~~~~~~~ll~~v 225 (227)
T 3rns_A 193 FIVKKGESAVLPANIPHAVEAETENFKMLLILV 225 (227)
T ss_dssp EEEETTEEEEECTTSCEEEECCSSCEEEEEEEE
T ss_pred EEECCCCEEEECCCCcEEEEeCCCCEEEEEEEE
Confidence 356889999999999999877444568888775
No 138
>2wbq_A L-arginine beta-hydroxylase; oxidoreductase, non-heme Fe(II) hydroxylase, cbeta- hydroxylation, L-arginine oxygenase, NRPS, viomycin; HET: ZZU; 1.10A {Streptomyces vinaceus} PDB: 2wbp_A* 2wbo_A*
Probab=24.33 E-value=44 Score=29.91 Aligned_cols=32 Identities=28% Similarity=0.371 Sum_probs=25.0
Q ss_pred CCccccccCC------eeeEEEeeCCceeccceEEeccc
Q 024926 128 VELGFHVDDS------EVTLNVCLGREFSGGELFFRGVR 160 (260)
Q Consensus 128 ~~l~~H~D~S------~~TlnV~L~~dfeGG~l~F~~~~ 160 (260)
..+.||.|.| .+++.-||...= ||++.|....
T Consensus 163 ~~l~~HtD~sy~~~pp~~~~L~cl~~p~-gG~T~~ad~~ 200 (358)
T 2wbq_A 163 QELGWHTEDAFSPYRADYVGLLSLRNPD-GVATTLAGVP 200 (358)
T ss_dssp SCEEEECTTTTCTTCCSEEEEEEEECTT-CCEEEEEECC
T ss_pred CCccccccCCCCCCCCCeEEEEeEecCC-CCCceEEech
Confidence 3588999987 789999996433 8999998743
No 139
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=24.12 E-value=21 Score=28.15 Aligned_cols=13 Identities=38% Similarity=1.009 Sum_probs=9.8
Q ss_pred cccccchhhhhhh
Q 024926 225 CSSWCAECQREKK 237 (260)
Q Consensus 225 ~~~~c~~c~~~~~ 237 (260)
++.|||-|.....
T Consensus 54 ~a~WC~~C~~~~p 66 (164)
T 1sen_A 54 HKSWCGACKALKP 66 (164)
T ss_dssp ECTTCHHHHHHHH
T ss_pred ECCCCHHHHHHHH
Confidence 4589999976654
No 140
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=24.08 E-value=18 Score=27.03 Aligned_cols=9 Identities=22% Similarity=0.349 Sum_probs=7.4
Q ss_pred cccchhhhh
Q 024926 227 SWCAECQRE 235 (260)
Q Consensus 227 ~~c~~c~~~ 235 (260)
.||+-|..+
T Consensus 42 ~wC~~C~~~ 50 (143)
T 4fo5_A 42 AYDAESRAR 50 (143)
T ss_dssp TTCHHHHHH
T ss_pred CcCHHHHHH
Confidence 789999665
No 141
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=24.06 E-value=21 Score=26.46 Aligned_cols=10 Identities=40% Similarity=1.195 Sum_probs=7.4
Q ss_pred cccchhhhhh
Q 024926 227 SWCAECQREK 236 (260)
Q Consensus 227 ~~c~~c~~~~ 236 (260)
.||+-|....
T Consensus 38 ~wC~~C~~~~ 47 (144)
T 1o73_A 38 SWCPPCRGFT 47 (144)
T ss_dssp TTCHHHHHHH
T ss_pred cCCHHHHHHH
Confidence 6899996543
No 142
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=23.84 E-value=22 Score=26.99 Aligned_cols=10 Identities=50% Similarity=1.218 Sum_probs=7.6
Q ss_pred cccchhhhhh
Q 024926 227 SWCAECQREK 236 (260)
Q Consensus 227 ~~c~~c~~~~ 236 (260)
.||+-|....
T Consensus 48 ~~C~~C~~~~ 57 (164)
T 2h30_A 48 SWCPLCLSEL 57 (164)
T ss_dssp TTCHHHHHHH
T ss_pred CCCHHHHHHH
Confidence 6899996543
No 143
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=23.75 E-value=23 Score=27.13 Aligned_cols=10 Identities=30% Similarity=1.102 Sum_probs=7.6
Q ss_pred cccchhhhhh
Q 024926 227 SWCAECQREK 236 (260)
Q Consensus 227 ~~c~~c~~~~ 236 (260)
.||+.|...-
T Consensus 47 ~~C~~C~~~~ 56 (165)
T 3ha9_A 47 AWCPSCVYMA 56 (165)
T ss_dssp TTCTTHHHHH
T ss_pred CCCcchhhhH
Confidence 7899996543
No 144
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=23.64 E-value=23 Score=26.48 Aligned_cols=10 Identities=40% Similarity=1.308 Sum_probs=7.4
Q ss_pred cccchhhhhh
Q 024926 227 SWCAECQREK 236 (260)
Q Consensus 227 ~~c~~c~~~~ 236 (260)
.||+-|....
T Consensus 38 ~~C~~C~~~~ 47 (152)
T 3gl3_A 38 SWCGPCRQSF 47 (152)
T ss_dssp TTCTHHHHHH
T ss_pred CcCHHHHHHH
Confidence 6899996543
No 145
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=29.31 E-value=17 Score=26.73 Aligned_cols=11 Identities=36% Similarity=0.764 Sum_probs=8.4
Q ss_pred ccccchhhhhh
Q 024926 226 SSWCAECQREK 236 (260)
Q Consensus 226 ~~~c~~c~~~~ 236 (260)
+.||+-|....
T Consensus 28 a~wC~~C~~~~ 38 (130)
T 2lst_A 28 SEHCPYCQQMN 38 (130)
Confidence 47999997654
No 146
>2q4a_A Clavaminate synthase-like protein AT3G21360; ensemble refinement, refinement methodology development, AT3 structural genomics; 2.39A {Arabidopsis thaliana} SCOP: b.82.2.8 PDB: 1y0z_A
Probab=23.24 E-value=34 Score=30.20 Aligned_cols=32 Identities=19% Similarity=0.147 Sum_probs=26.3
Q ss_pred CCccccccCC------eeeEEEeeCCceeccceEEecc
Q 024926 128 VELGFHVDDS------EVTLNVCLGREFSGGELFFRGV 159 (260)
Q Consensus 128 ~~l~~H~D~S------~~TlnV~L~~dfeGG~l~F~~~ 159 (260)
..+.||.|.| .+++.-|+...=+||+|.|...
T Consensus 115 ~~~~~HtD~sy~~~pP~~~~L~c~~~p~~GG~T~~ad~ 152 (330)
T 2q4a_A 115 QKIPFHHEMAQVREFPSKLFFYCEIEPKCGGETPIVLS 152 (330)
T ss_dssp SCEEEECTTTTSTTCCSEEEEEEEECCSEECCCCEEEH
T ss_pred cccccccccCCCCCCCceEEEECcCCCCcCCceeeecH
Confidence 4788999998 6899999965557999999753
No 147
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=23.07 E-value=20 Score=27.28 Aligned_cols=9 Identities=11% Similarity=0.468 Sum_probs=6.9
Q ss_pred cccchhhhh
Q 024926 227 SWCAECQRE 235 (260)
Q Consensus 227 ~~c~~c~~~ 235 (260)
.|||-|..+
T Consensus 41 ~~C~~C~~~ 49 (169)
T 2v1m_A 41 CKCGATDKN 49 (169)
T ss_dssp SSSTTHHHH
T ss_pred ccCCchHHH
Confidence 689999543
No 148
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=23.03 E-value=24 Score=26.39 Aligned_cols=9 Identities=33% Similarity=0.796 Sum_probs=7.0
Q ss_pred cccchhhhh
Q 024926 227 SWCAECQRE 235 (260)
Q Consensus 227 ~~c~~c~~~ 235 (260)
.||+-|...
T Consensus 38 ~~C~~C~~~ 46 (153)
T 2l5o_A 38 PSCPGCVSE 46 (153)
T ss_dssp TTCTTHHHH
T ss_pred CCCccHHHH
Confidence 589999654
No 149
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=22.98 E-value=23 Score=26.58 Aligned_cols=10 Identities=40% Similarity=1.421 Sum_probs=7.3
Q ss_pred cccchhhhhh
Q 024926 227 SWCAECQREK 236 (260)
Q Consensus 227 ~~c~~c~~~~ 236 (260)
.||+-|....
T Consensus 36 ~~C~~C~~~~ 45 (151)
T 2f9s_A 36 TWCEPCKKEF 45 (151)
T ss_dssp TTCHHHHHHH
T ss_pred CCCHHHHHHH
Confidence 6899996543
No 150
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=22.83 E-value=24 Score=26.61 Aligned_cols=9 Identities=33% Similarity=0.914 Sum_probs=7.0
Q ss_pred cccchhhhh
Q 024926 227 SWCAECQRE 235 (260)
Q Consensus 227 ~~c~~c~~~ 235 (260)
.||+-|...
T Consensus 39 ~~C~~C~~~ 47 (152)
T 2lrn_A 39 AGCSWCRKE 47 (152)
T ss_dssp TTCTTHHHH
T ss_pred CCChhHHHH
Confidence 689999654
No 151
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=22.73 E-value=23 Score=27.22 Aligned_cols=12 Identities=17% Similarity=0.861 Sum_probs=8.6
Q ss_pred ccccchhhhhhh
Q 024926 226 SSWCAECQREKK 237 (260)
Q Consensus 226 ~~~c~~c~~~~~ 237 (260)
+.||+-|.....
T Consensus 41 a~wC~~C~~~~p 52 (153)
T 2wz9_A 41 APWAPQCAQMNE 52 (153)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCCCHhHHHHHH
Confidence 379999966443
No 152
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=22.36 E-value=24 Score=26.44 Aligned_cols=9 Identities=33% Similarity=0.918 Sum_probs=6.9
Q ss_pred cccchhhhh
Q 024926 227 SWCAECQRE 235 (260)
Q Consensus 227 ~~c~~c~~~ 235 (260)
.||+-|...
T Consensus 38 ~wC~~C~~~ 46 (146)
T 1o8x_A 38 SWCPPARGF 46 (146)
T ss_dssp TTCHHHHHH
T ss_pred cCCHHHHHH
Confidence 689999544
No 153
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=22.33 E-value=33 Score=26.65 Aligned_cols=9 Identities=22% Similarity=0.737 Sum_probs=4.4
Q ss_pred cccchhhhh
Q 024926 227 SWCAECQRE 235 (260)
Q Consensus 227 ~~c~~c~~~ 235 (260)
.|||-|..+
T Consensus 41 ~~c~~C~~e 49 (157)
T 4g2e_A 41 AFTQVCTKE 49 (157)
T ss_dssp TTCCC----
T ss_pred CCCCccccc
Confidence 689999654
No 154
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=22.32 E-value=60 Score=23.94 Aligned_cols=25 Identities=24% Similarity=0.183 Sum_probs=21.4
Q ss_pred ecCCCceEEEecCCCCcCccccCcc
Q 024926 177 YSHVPGYAVLHRGRHRHGARATTSG 201 (260)
Q Consensus 177 ~~~~~G~avlh~g~~~H~~~pVTsG 201 (260)
+...+|+.++.|....|.....+..
T Consensus 75 ~~l~~Gd~i~ipa~~~H~~~n~~~~ 99 (112)
T 2opk_A 75 RVMRPGDWLHVPAHCRHRVAWTDGG 99 (112)
T ss_dssp EEECTTEEEEECTTCCEEEEEECSS
T ss_pred EEECCCCEEEECCCCcEEEEeCCCC
Confidence 3568899999999999999887765
No 155
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=22.29 E-value=24 Score=26.68 Aligned_cols=12 Identities=17% Similarity=0.149 Sum_probs=8.6
Q ss_pred ccccchhhhhhh
Q 024926 226 SSWCAECQREKK 237 (260)
Q Consensus 226 ~~~c~~c~~~~~ 237 (260)
+.||+.|.+...
T Consensus 39 a~wC~~C~~~~p 50 (135)
T 2dbc_A 39 RSSVPMCLVVNQ 50 (135)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCCChHHHHHHH
Confidence 379999965543
No 156
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=22.19 E-value=24 Score=26.38 Aligned_cols=10 Identities=40% Similarity=1.394 Sum_probs=7.5
Q ss_pred cccchhhhhh
Q 024926 227 SWCAECQREK 236 (260)
Q Consensus 227 ~~c~~c~~~~ 236 (260)
.||+.|...-
T Consensus 38 ~~C~~C~~~~ 47 (154)
T 3kcm_A 38 TWCPPCREEI 47 (154)
T ss_dssp TTCHHHHHHH
T ss_pred CCCHHHHHHH
Confidence 6899996543
No 157
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=21.38 E-value=22 Score=29.46 Aligned_cols=11 Identities=27% Similarity=0.661 Sum_probs=8.5
Q ss_pred cccccchhhhh
Q 024926 225 CSSWCAECQRE 235 (260)
Q Consensus 225 ~~~~c~~c~~~ 235 (260)
|+-|||-|.+-
T Consensus 121 f~~~C~~C~~~ 131 (197)
T 1un2_A 121 FSFFCPHCYQF 131 (197)
T ss_dssp ECTTCHHHHHH
T ss_pred ECCCChhHHHh
Confidence 56799999653
No 158
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=21.27 E-value=26 Score=27.91 Aligned_cols=12 Identities=33% Similarity=0.205 Sum_probs=9.0
Q ss_pred ccccchhhhhhh
Q 024926 226 SSWCAECQREKK 237 (260)
Q Consensus 226 ~~~c~~c~~~~~ 237 (260)
+.|||-|.+-..
T Consensus 53 A~WC~~Ck~m~p 64 (151)
T 3ph9_A 53 LEDCQYSQALKK 64 (151)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCCCHhHHHHHH
Confidence 489999976444
No 159
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=21.09 E-value=27 Score=25.57 Aligned_cols=13 Identities=46% Similarity=0.989 Sum_probs=10.4
Q ss_pred cccchhhhhhhHH
Q 024926 227 SWCAECQREKKER 239 (260)
Q Consensus 227 ~~c~~c~~~~~~~ 239 (260)
+|||.|.+-|+.=
T Consensus 12 ~~Cp~C~~aK~~L 24 (92)
T 2lqo_A 12 SWCGYCLRLKTAL 24 (92)
T ss_dssp TTCSSHHHHHHHH
T ss_pred CCCHhHHHHHHHH
Confidence 7999998877653
No 160
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=21.07 E-value=91 Score=23.42 Aligned_cols=36 Identities=11% Similarity=0.049 Sum_probs=26.5
Q ss_pred ecCCCceEEEecCCCCcCccccC--ccceeEEEeeccc
Q 024926 177 YSHVPGYAVLHRGRHRHGARATT--SGSRVNLLVWCRS 212 (260)
Q Consensus 177 ~~~~~G~avlh~g~~~H~~~pVT--sG~Ry~Lv~w~rs 212 (260)
|...+|++++.+....|...+.. .+.++..+.+-.+
T Consensus 58 ~~l~~Gd~~~i~p~~~H~~~~~~~~~~~~~~~i~f~~~ 95 (164)
T 2arc_A 58 FVCRPGDILLFPPGEIHHYGRHPEAREWYHQWVYFRPR 95 (164)
T ss_dssp EEECTTCEEEECTTCCEEEEECTTSSEEEEEEEEECCC
T ss_pred EEecCCeEEEEcCCCCEEEEeCCCCCcEEEEEEEECCh
Confidence 46789999999999999977665 3356666665443
No 161
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=21.01 E-value=26 Score=26.89 Aligned_cols=12 Identities=17% Similarity=0.678 Sum_probs=8.5
Q ss_pred ccccchhhhhhh
Q 024926 226 SSWCAECQREKK 237 (260)
Q Consensus 226 ~~~c~~c~~~~~ 237 (260)
+.||+-|.....
T Consensus 32 a~wC~~C~~~~p 43 (142)
T 1qgv_A 32 HDWDPTCMKMDE 43 (142)
T ss_dssp CTTSHHHHHHHH
T ss_pred CCCCHHHHHHHH
Confidence 379999965443
No 162
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=20.86 E-value=27 Score=26.78 Aligned_cols=10 Identities=40% Similarity=1.464 Sum_probs=7.6
Q ss_pred cccchhhhhh
Q 024926 227 SWCAECQREK 236 (260)
Q Consensus 227 ~~c~~c~~~~ 236 (260)
.|||-|....
T Consensus 61 ~~C~~C~~~~ 70 (168)
T 2b1k_A 61 TWCPTCRAEH 70 (168)
T ss_dssp TTCHHHHHHH
T ss_pred CCCHHHHHHH
Confidence 6899996543
No 163
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=20.76 E-value=24 Score=26.72 Aligned_cols=11 Identities=18% Similarity=0.401 Sum_probs=7.9
Q ss_pred cccchhhhhhh
Q 024926 227 SWCAECQREKK 237 (260)
Q Consensus 227 ~~c~~c~~~~~ 237 (260)
.|||.|.+-+.
T Consensus 38 ~~C~~C~~a~~ 48 (107)
T 2fgx_A 38 EGCHLCEEMIA 48 (107)
T ss_dssp SSCHHHHHHHH
T ss_pred CCChhHHHHHH
Confidence 58999965443
No 164
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=20.64 E-value=27 Score=26.16 Aligned_cols=10 Identities=50% Similarity=1.308 Sum_probs=7.5
Q ss_pred cccchhhhhh
Q 024926 227 SWCAECQREK 236 (260)
Q Consensus 227 ~~c~~c~~~~ 236 (260)
.||+.|...-
T Consensus 40 ~~C~~C~~~~ 49 (154)
T 3ia1_A 40 SWCTVCKAEF 49 (154)
T ss_dssp TTCHHHHHHH
T ss_pred ccChhHHHHH
Confidence 7899996543
No 165
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=20.49 E-value=25 Score=29.80 Aligned_cols=10 Identities=10% Similarity=0.255 Sum_probs=7.8
Q ss_pred cccchhhhhh
Q 024926 227 SWCAECQREK 236 (260)
Q Consensus 227 ~~c~~c~~~~ 236 (260)
.|||-|....
T Consensus 36 ~wC~~C~~~~ 45 (287)
T 3qou_A 36 ERSQHCLQLT 45 (287)
T ss_dssp TTCTTTTTTH
T ss_pred CCChHHHHHH
Confidence 6999997654
No 166
>3eat_X Pyoverdine biosynthesis protein PVCB; paerucumarin, Fe/alpha-ketoglutarate dependent hydroxylase, 2-isocyano-6,7-dihydroxycoumarin; 2.50A {Pseudomonas aeruginosa}
Probab=20.41 E-value=57 Score=28.58 Aligned_cols=31 Identities=23% Similarity=0.341 Sum_probs=24.3
Q ss_pred CccccccCC------eeeEEEeeCCce--eccceEEecc
Q 024926 129 ELGFHVDDS------EVTLNVCLGREF--SGGELFFRGV 159 (260)
Q Consensus 129 ~l~~H~D~S------~~TlnV~L~~df--eGG~l~F~~~ 159 (260)
.+.||.|.| .+++.-|+.-.= +||+|.|...
T Consensus 108 ~~~wHtD~sy~~~pp~~~~L~c~~~p~~~~GG~T~~~d~ 146 (293)
T 3eat_X 108 YVPLHWDGMYLETVPEFQVFHCVDAPGDSDGGRTTFSST 146 (293)
T ss_dssp CEEEECTTTTSSEEEEEEEEEEEECCSCCSBCCEEEEEH
T ss_pred CccceECCCCcCCCCceEEEEeEeCCCCCCCCceEEeeH
Confidence 578999988 578888886433 8999999753
No 167
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=20.36 E-value=25 Score=27.70 Aligned_cols=9 Identities=33% Similarity=0.427 Sum_probs=7.2
Q ss_pred cccchhhhh
Q 024926 227 SWCAECQRE 235 (260)
Q Consensus 227 ~~c~~c~~~ 235 (260)
.|||-|..+
T Consensus 48 twC~~C~~~ 56 (180)
T 3kij_A 48 SDCQLTDRN 56 (180)
T ss_dssp SSSTTHHHH
T ss_pred cCCCCcHHH
Confidence 689999654
No 168
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=20.19 E-value=24 Score=29.40 Aligned_cols=11 Identities=36% Similarity=1.047 Sum_probs=8.1
Q ss_pred ccccchhhhhh
Q 024926 226 SSWCAECQREK 236 (260)
Q Consensus 226 ~~~c~~c~~~~ 236 (260)
+.||+-|.+..
T Consensus 39 a~wC~~C~~~~ 49 (244)
T 3q6o_A 39 ASWCGHCIAFA 49 (244)
T ss_dssp CTTCHHHHHHH
T ss_pred CCcCHHHHHHH
Confidence 47999996543
No 169
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=20.04 E-value=26 Score=26.72 Aligned_cols=9 Identities=22% Similarity=0.357 Sum_probs=6.9
Q ss_pred cccchhhhh
Q 024926 227 SWCAECQRE 235 (260)
Q Consensus 227 ~~c~~c~~~ 235 (260)
.||+-|..+
T Consensus 42 ~~C~~C~~~ 50 (170)
T 2p5q_A 42 SKCGMTNSN 50 (170)
T ss_dssp SSSTTHHHH
T ss_pred ccCCccHHH
Confidence 689999653
Done!