Query 024929
Match_columns 260
No_of_seqs 126 out of 442
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 16:54:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024929.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024929hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3uzd_A 14-3-3 protein gamma; s 100.0 9.2E-98 3E-102 663.5 24.7 237 6-242 3-241 (248)
2 3ubw_A 14-3-3E, 14-3-3 protein 100.0 3.8E-97 1E-101 662.2 25.4 237 1-237 25-261 (261)
3 3iqu_A 14-3-3 protein sigma; s 100.0 5.9E-97 2E-101 654.6 22.3 230 6-235 7-236 (236)
4 1o9d_A 14-3-3-like protein C; 100.0 1.7E-95 6E-100 653.7 24.8 240 3-242 4-245 (260)
5 2br9_A 14-3-3E, 14-3-3 protein 100.0 1.3E-94 4.6E-99 640.3 25.4 233 4-236 2-234 (234)
6 2npm_A 14-3-3 domain containin 100.0 9.4E-94 3.2E-98 642.0 24.8 233 4-237 25-260 (260)
7 3efz_A 14-3-3 protein; 14-3-3, 100.0 4.6E-90 1.6E-94 617.9 16.7 227 6-240 28-261 (268)
8 2o8p_A 14-3-3 domain containin 100.0 6.9E-82 2.4E-86 554.2 20.9 215 6-232 2-226 (227)
9 3edt_B KLC 2, kinesin light ch 95.9 0.2 6.7E-06 40.9 13.6 157 9-207 45-201 (283)
10 3nf1_A KLC 1, kinesin light ch 95.2 1.1 3.9E-05 37.0 21.2 185 8-207 28-227 (311)
11 3vtx_A MAMA; tetratricopeptide 95.1 0.86 2.9E-05 35.4 17.1 160 9-203 7-169 (184)
12 3n71_A Histone lysine methyltr 93.1 0.58 2E-05 44.7 10.8 100 94-207 326-425 (490)
13 3qwp_A SET and MYND domain-con 92.4 0.81 2.8E-05 42.7 10.5 58 149-207 346-403 (429)
14 3qww_A SET and MYND domain-con 92.1 0.97 3.3E-05 42.4 10.7 100 94-207 315-414 (433)
15 3ro2_A PINS homolog, G-protein 92.1 4.4 0.00015 33.3 19.4 190 7-206 5-214 (338)
16 3edt_B KLC 2, kinesin light ch 92.1 1.1 3.9E-05 36.2 9.9 95 98-206 22-116 (283)
17 3u3w_A Transcriptional activat 91.8 5.3 0.00018 33.8 18.3 72 124-207 157-228 (293)
18 3fp2_A TPR repeat-containing p 91.2 8.1 0.00028 34.8 16.7 49 148-205 444-492 (537)
19 1fch_A Peroxisomal targeting s 91.1 6.5 0.00022 33.4 14.5 57 9-67 100-156 (368)
20 3hym_B Cell division cycle pro 91.0 6 0.0002 32.8 14.9 46 148-202 252-297 (330)
21 3ro2_A PINS homolog, G-protein 90.9 5.8 0.0002 32.5 16.1 55 149-206 200-254 (338)
22 3u4t_A TPR repeat-containing p 90.9 5.6 0.00019 32.3 14.2 53 150-203 197-249 (272)
23 4i17_A Hypothetical protein; T 90.8 5.4 0.00018 31.9 13.1 60 8-68 8-67 (228)
24 3ulq_A Response regulator aspa 90.5 2.6 8.9E-05 36.9 11.3 73 120-206 101-174 (383)
25 3qww_A SET and MYND domain-con 90.2 1.4 4.8E-05 41.3 9.8 58 149-207 315-372 (433)
26 4a1s_A PINS, partner of inscut 90.0 9 0.00031 33.2 22.6 190 8-206 49-254 (411)
27 3ieg_A DNAJ homolog subfamily 89.7 8.1 0.00028 32.2 17.7 47 148-203 288-334 (359)
28 3ulq_A Response regulator aspa 89.6 9.8 0.00033 33.1 17.0 176 12-206 108-295 (383)
29 3n71_A Histone lysine methyltr 89.5 1.7 5.7E-05 41.5 9.8 58 149-207 326-383 (490)
30 4g1t_A Interferon-induced prot 89.0 12 0.0004 33.2 17.1 49 149-202 351-399 (472)
31 2gw1_A Mitochondrial precursor 88.2 13 0.00046 32.9 14.5 55 148-203 205-265 (514)
32 4abn_A Tetratricopeptide repea 88.1 16 0.00055 33.6 16.5 173 8-203 103-286 (474)
33 3ro3_A PINS homolog, G-protein 87.1 6.8 0.00023 28.2 14.1 149 9-205 11-159 (164)
34 4gcn_A Protein STI-1; structur 86.8 1.9 6.6E-05 32.1 6.8 48 148-204 24-71 (127)
35 3q15_A PSP28, response regulat 86.6 4.2 0.00014 35.6 10.0 75 119-206 98-172 (378)
36 3sf4_A G-protein-signaling mod 86.5 14 0.00049 31.4 19.3 53 149-205 204-257 (406)
37 4eqf_A PEX5-related protein; a 85.9 15 0.00053 31.2 16.8 59 8-68 66-124 (365)
38 3qwp_A SET and MYND domain-con 85.9 2.1 7E-05 39.9 7.9 58 149-207 304-361 (429)
39 3sf4_A G-protein-signaling mod 85.7 16 0.00054 31.1 22.4 189 9-206 11-218 (406)
40 4gyw_A UDP-N-acetylglucosamine 85.4 22 0.00074 35.4 15.5 166 8-209 10-179 (723)
41 2xpi_A Anaphase-promoting comp 85.4 22 0.00075 32.5 18.3 47 148-203 532-578 (597)
42 2q7f_A YRRB protein; TPR, prot 84.9 13 0.00043 29.3 16.4 59 8-68 58-116 (243)
43 2y4t_A DNAJ homolog subfamily 84.9 19 0.00066 31.4 15.5 47 148-203 311-357 (450)
44 4a1s_A PINS, partner of inscut 84.7 19 0.00064 31.1 18.4 179 9-206 88-294 (411)
45 4b4t_Q 26S proteasome regulato 84.2 21 0.0007 31.2 18.6 184 10-207 58-248 (434)
46 2qfc_A PLCR protein; TPR, HTH, 83.4 19 0.00065 30.2 19.3 189 8-218 76-276 (293)
47 2y4t_A DNAJ homolog subfamily 82.3 25 0.00084 30.7 17.2 167 10-203 146-323 (450)
48 3q15_A PSP28, response regulat 81.9 25 0.00085 30.5 17.1 54 148-205 238-291 (378)
49 3u3w_A Transcriptional activat 81.3 10 0.00034 32.0 9.8 91 101-205 92-185 (293)
50 2ho1_A Type 4 fimbrial biogene 81.2 19 0.00065 28.6 15.4 165 8-203 38-203 (252)
51 3rkv_A Putative peptidylprolyl 80.9 2.4 8E-05 32.4 5.2 54 149-203 28-91 (162)
52 2qfc_A PLCR protein; TPR, HTH, 80.2 7.2 0.00025 32.9 8.5 73 121-205 154-226 (293)
53 2xpi_A Anaphase-promoting comp 79.9 36 0.0012 31.0 19.5 55 148-204 491-545 (597)
54 1fch_A Peroxisomal targeting s 79.8 26 0.0009 29.5 18.2 58 8-67 65-122 (368)
55 3lf9_A 4E10_D0_1IS1A_001_C (T1 79.7 8.1 0.00028 30.2 7.7 86 21-111 11-103 (121)
56 1qqe_A Vesicular transport pro 79.3 27 0.00094 29.3 12.3 52 148-203 134-186 (292)
57 4gco_A Protein STI-1; structur 78.4 6.5 0.00022 29.2 6.8 46 149-203 30-75 (126)
58 3ro3_A PINS homolog, G-protein 78.3 9.6 0.00033 27.4 7.7 73 122-207 49-121 (164)
59 2vq2_A PILW, putative fimbrial 78.2 21 0.00071 27.4 16.5 167 8-204 9-176 (225)
60 2gw1_A Mitochondrial precursor 78.1 36 0.0012 30.0 16.0 172 9-204 306-478 (514)
61 4eqf_A PEX5-related protein; a 77.9 31 0.0011 29.2 16.1 59 8-68 100-158 (365)
62 1elr_A TPR2A-domain of HOP; HO 77.8 14 0.00047 25.7 8.2 53 149-203 55-107 (131)
63 2pl2_A Hypothetical conserved 77.7 25 0.00087 28.1 13.6 58 8-67 6-63 (217)
64 3ieg_A DNAJ homolog subfamily 77.4 29 0.001 28.6 18.5 168 11-204 124-301 (359)
65 3hym_B Cell division cycle pro 76.1 31 0.0011 28.3 17.4 56 148-204 209-265 (330)
66 3fp2_A TPR repeat-containing p 75.9 43 0.0015 29.8 17.6 54 150-203 213-271 (537)
67 3cv0_A Peroxisome targeting si 74.9 33 0.0011 28.0 16.4 44 8-52 22-65 (327)
68 4gcn_A Protein STI-1; structur 74.5 9 0.00031 28.3 6.7 52 149-202 59-110 (127)
69 4g1t_A Interferon-induced prot 73.5 7.5 0.00026 34.5 7.0 53 149-202 68-121 (472)
70 2q7f_A YRRB protein; TPR, prot 72.5 32 0.0011 26.8 11.4 59 9-69 25-83 (243)
71 3gw4_A Uncharacterized protein 72.1 13 0.00044 28.5 7.3 74 120-205 64-137 (203)
72 2l6j_A TPR repeat-containing p 71.9 13 0.00044 25.4 6.7 45 149-202 21-65 (111)
73 4gyw_A UDP-N-acetylglucosamine 71.6 82 0.0028 31.1 15.2 45 8-53 44-88 (723)
74 1na3_A Designed protein CTPR2; 70.3 17 0.00059 23.7 6.8 46 149-203 26-71 (91)
75 3uq3_A Heat shock protein STI1 70.1 37 0.0013 26.6 19.1 56 8-66 6-61 (258)
76 3k9i_A BH0479 protein; putativ 69.2 16 0.00054 26.0 6.8 47 149-204 44-90 (117)
77 3sz7_A HSC70 cochaperone (SGT) 69.1 24 0.00082 26.5 8.2 46 149-203 62-107 (164)
78 3nf1_A KLC 1, kinesin light ch 68.3 46 0.0016 26.9 20.6 181 9-204 71-307 (311)
79 2kck_A TPR repeat; tetratricop 67.6 20 0.00068 24.0 6.8 46 149-203 23-68 (112)
80 2e2e_A Formate-dependent nitri 67.2 38 0.0013 25.5 12.4 46 149-203 98-143 (177)
81 2xev_A YBGF; tetratricopeptide 67.1 25 0.00087 24.6 7.6 49 149-203 56-104 (129)
82 3upv_A Heat shock protein STI1 66.0 32 0.0011 24.3 11.9 48 149-205 55-102 (126)
83 2hr2_A Hypothetical protein; a 66.0 22 0.00075 28.7 7.6 54 148-203 27-85 (159)
84 3uq3_A Heat shock protein STI1 65.8 46 0.0016 26.0 16.3 32 8-39 80-111 (258)
85 2dba_A Smooth muscle cell asso 65.6 16 0.00054 26.2 6.2 49 149-203 45-93 (148)
86 2kc7_A BFR218_protein; tetratr 65.5 25 0.00084 23.8 7.0 47 149-203 17-63 (99)
87 3ma5_A Tetratricopeptide repea 63.3 34 0.0012 23.7 11.2 58 8-67 8-65 (100)
88 2ifu_A Gamma-SNAP; membrane fu 63.0 68 0.0023 27.0 14.2 52 148-202 171-222 (307)
89 2pl2_A Hypothetical conserved 62.8 56 0.0019 26.0 16.7 44 8-52 40-83 (217)
90 3u4t_A TPR repeat-containing p 62.2 58 0.002 25.9 11.4 49 148-205 158-209 (272)
91 3qky_A Outer membrane assembly 62.1 61 0.0021 26.1 21.7 64 7-71 15-80 (261)
92 3upv_A Heat shock protein STI1 62.0 26 0.0009 24.8 6.8 46 149-203 21-66 (126)
93 4gco_A Protein STI-1; structur 61.6 26 0.00088 25.7 6.8 46 149-203 64-109 (126)
94 2kat_A Uncharacterized protein 61.0 39 0.0013 23.5 12.1 59 8-68 20-78 (115)
95 4gfq_A Ribosome-recycling fact 60.3 21 0.00071 30.4 6.6 69 38-111 127-199 (209)
96 2lni_A Stress-induced-phosphop 60.0 31 0.0011 23.9 6.8 46 149-203 67-112 (133)
97 3ma5_A Tetratricopeptide repea 59.8 40 0.0014 23.3 9.6 72 149-235 24-95 (100)
98 2fbn_A 70 kDa peptidylprolyl i 59.6 58 0.002 25.1 12.2 31 9-39 40-70 (198)
99 2ho1_A Type 4 fimbrial biogene 58.5 65 0.0022 25.3 16.4 61 8-70 72-132 (252)
100 1lyp_A CAP18; lipopolysacchari 57.5 22 0.00075 20.6 4.3 26 83-108 4-29 (32)
101 3vtx_A MAMA; tetratricopeptide 57.3 31 0.0011 26.1 6.8 46 149-203 22-67 (184)
102 1elr_A TPR2A-domain of HOP; HO 56.6 41 0.0014 23.0 6.9 49 149-206 21-69 (131)
103 1qqe_A Vesicular transport pro 56.2 32 0.0011 28.9 7.3 53 149-204 54-106 (292)
104 2kat_A Uncharacterized protein 56.0 46 0.0016 23.1 7.2 49 149-206 36-84 (115)
105 1xnf_A Lipoprotein NLPI; TPR, 55.5 75 0.0026 25.1 9.4 47 148-203 93-139 (275)
106 1xnf_A Lipoprotein NLPI; TPR, 55.1 76 0.0026 25.1 15.4 49 150-203 195-243 (275)
107 3cv0_A Peroxisome targeting si 55.1 83 0.0028 25.5 17.9 33 8-40 56-88 (327)
108 2xcb_A PCRH, regulatory protei 55.1 59 0.002 23.7 8.8 48 149-205 69-116 (142)
109 3bee_A Putative YFRE protein; 54.7 16 0.00056 26.1 4.5 31 9-39 45-75 (93)
110 1elw_A TPR1-domain of HOP; HOP 54.4 38 0.0013 22.7 6.3 45 149-202 55-99 (118)
111 2vgx_A Chaperone SYCD; alterna 54.3 34 0.0012 25.7 6.6 46 149-203 72-117 (148)
112 3rkv_A Putative peptidylprolyl 54.0 65 0.0022 23.9 8.9 70 149-235 80-149 (162)
113 2vyi_A SGTA protein; chaperone 54.0 46 0.0016 22.7 6.8 16 188-203 59-74 (131)
114 1dd5_A Ribosome recycling fact 53.8 33 0.0011 28.6 6.7 73 38-111 103-175 (185)
115 2h6f_A Protein farnesyltransfe 53.8 1.2E+02 0.0042 27.0 14.6 59 7-67 97-156 (382)
116 2vyi_A SGTA protein; chaperone 53.4 48 0.0016 22.6 6.8 47 149-204 63-109 (131)
117 1w3b_A UDP-N-acetylglucosamine 53.1 1.1E+02 0.0036 26.1 15.4 32 9-40 69-100 (388)
118 4ga2_A E3 SUMO-protein ligase 52.2 37 0.0013 25.5 6.4 32 9-40 33-64 (150)
119 1a17_A Serine/threonine protei 52.0 46 0.0016 24.1 6.8 47 149-204 64-110 (166)
120 1elw_A TPR1-domain of HOP; HOP 52.0 50 0.0017 22.0 6.8 47 149-204 21-67 (118)
121 1ise_A Ribosome recycling fact 51.8 35 0.0012 28.4 6.5 69 38-111 103-175 (185)
122 3sz7_A HSC70 cochaperone (SGT) 51.7 71 0.0024 23.7 11.6 31 9-39 13-43 (164)
123 3as5_A MAMA; tetratricopeptide 51.7 66 0.0023 23.3 15.8 58 9-68 10-67 (186)
124 1ihg_A Cyclophilin 40; ppiase 51.6 14 0.00048 33.1 4.4 54 149-203 240-301 (370)
125 2dba_A Smooth muscle cell asso 51.0 50 0.0017 23.3 6.8 46 149-203 82-127 (148)
126 4ga2_A E3 SUMO-protein ligase 50.7 47 0.0016 24.9 6.8 46 149-203 48-93 (150)
127 1eh1_A Ribosome recycling fact 50.4 35 0.0012 28.4 6.3 73 38-111 104-176 (185)
128 1is1_A Ribosome recycling fact 50.2 36 0.0012 28.3 6.4 69 38-111 103-175 (185)
129 3gyz_A Chaperone protein IPGC; 49.6 40 0.0014 26.0 6.4 47 148-203 86-132 (151)
130 2h6f_A Protein farnesyltransfe 49.5 1.4E+02 0.0049 26.6 13.8 44 10-54 203-246 (382)
131 1wqg_A Ribosome recycling fact 48.9 39 0.0013 28.1 6.4 69 38-111 103-175 (185)
132 1ge9_A Ribosome recycling fact 48.9 68 0.0023 26.6 7.9 70 38-111 105-174 (184)
133 2hr2_A Hypothetical protein; a 48.7 32 0.0011 27.7 5.8 72 149-232 74-154 (159)
134 1a17_A Serine/threonine protei 48.0 56 0.0019 23.6 6.8 47 149-204 30-76 (166)
135 1na0_A Designed protein CTPR3; 47.7 61 0.0021 21.8 6.8 46 149-203 26-71 (125)
136 1hh8_A P67PHOX, NCF-2, neutrop 45.8 58 0.002 25.0 6.8 46 149-203 54-99 (213)
137 1na0_A Designed protein CTPR3; 45.4 67 0.0023 21.5 6.8 46 149-203 60-105 (125)
138 1kt0_A FKBP51, 51 kDa FK506-bi 45.4 33 0.0011 31.3 6.1 53 149-203 285-345 (457)
139 1p5q_A FKBP52, FK506-binding p 45.1 19 0.00065 31.4 4.1 54 149-203 164-224 (336)
140 3urz_A Uncharacterized protein 44.9 58 0.002 25.6 6.8 32 7-38 4-35 (208)
141 2ifu_A Gamma-SNAP; membrane fu 44.6 63 0.0022 27.2 7.4 53 148-204 131-184 (307)
142 1w3b_A UDP-N-acetylglucosamine 44.4 1.5E+02 0.005 25.2 15.1 44 8-52 34-77 (388)
143 1ya0_A SMG-7 transcript varian 44.2 66 0.0022 30.6 8.0 47 128-186 158-210 (497)
144 3k9i_A BH0479 protein; putativ 44.1 80 0.0027 22.1 8.3 59 8-68 28-86 (117)
145 2ooe_A Cleavage stimulation fa 43.5 28 0.00095 31.9 5.2 53 148-209 62-114 (530)
146 2xcb_A PCRH, regulatory protei 43.3 92 0.0032 22.6 10.8 32 8-39 19-50 (142)
147 2kck_A TPR repeat; tetratricop 42.7 70 0.0024 21.1 7.9 28 11-38 10-37 (112)
148 2v5f_A Prolyl 4-hydroxylase su 42.5 86 0.003 22.0 7.4 53 149-203 22-74 (104)
149 1wao_1 Serine/threonine protei 41.9 52 0.0018 30.3 6.8 15 188-202 87-101 (477)
150 3as5_A MAMA; tetratricopeptide 41.8 81 0.0028 22.8 6.8 47 149-204 93-139 (186)
151 2yhc_A BAMD, UPF0169 lipoprote 41.7 1.3E+02 0.0044 23.8 19.6 62 8-70 5-68 (225)
152 1zu2_A Mitochondrial import re 40.1 55 0.0019 26.3 5.8 95 128-236 42-143 (158)
153 2c2l_A CHIP, carboxy terminus 38.6 51 0.0018 27.6 5.8 50 153-206 52-103 (281)
154 3gyz_A Chaperone protein IPGC; 38.4 1.3E+02 0.0044 22.9 9.9 45 7-52 36-80 (151)
155 3caz_A BAR protein; thermo-aci 37.1 1.9E+02 0.0065 24.4 10.6 111 13-164 100-210 (294)
156 1na3_A Designed protein CTPR2; 37.0 62 0.0021 20.8 5.0 59 8-68 10-68 (91)
157 1xi4_A Clathrin heavy chain; a 36.6 4.7E+02 0.016 28.8 13.7 23 179-201 1284-1306(1630)
158 2ond_A Cleavage stimulation fa 36.2 1.9E+02 0.0064 24.1 15.3 30 10-39 102-131 (308)
159 2kc7_A BFR218_protein; tetratr 36.2 57 0.0019 21.8 4.8 29 11-39 4-32 (99)
160 2r5s_A Uncharacterized protein 35.4 87 0.003 23.7 6.2 33 8-40 109-141 (176)
161 1hh8_A P67PHOX, NCF-2, neutrop 35.1 77 0.0026 24.2 6.0 53 149-202 88-148 (213)
162 1hxi_A PEX5, peroxisome target 34.8 1.2E+02 0.0042 21.6 8.3 58 8-67 18-75 (121)
163 1hxi_A PEX5, peroxisome target 34.3 1.3E+02 0.0043 21.5 6.8 46 149-203 34-79 (121)
164 4abn_A Tetratricopeptide repea 34.2 2.6E+02 0.009 25.2 14.0 161 19-203 80-249 (474)
165 2l6j_A TPR repeat-containing p 33.4 1.1E+02 0.0036 20.4 6.2 33 8-40 5-37 (111)
166 3onj_A T-snare VTI1; helix, HA 32.5 1.4E+02 0.0049 21.7 9.6 78 23-101 10-90 (97)
167 2vq2_A PILW, putative fimbrial 32.3 1.6E+02 0.0054 22.1 16.7 63 8-71 43-105 (225)
168 2e2e_A Formate-dependent nitri 31.1 99 0.0034 23.0 5.9 48 149-204 61-110 (177)
169 2wh5_A Acyl-COA-binding domain 30.9 73 0.0025 24.0 4.8 36 21-56 10-46 (106)
170 2wb7_A PT26-6P; extra chromoso 30.1 1.5E+02 0.0051 28.5 7.8 53 136-190 436-489 (526)
171 2ond_A Cleavage stimulation fa 30.0 1.4E+02 0.0047 24.9 7.1 48 148-203 115-162 (308)
172 2fbn_A 70 kDa peptidylprolyl i 28.9 1.4E+02 0.0047 22.8 6.5 59 8-68 89-147 (198)
173 2vgx_A Chaperone SYCD; alterna 28.2 1.8E+02 0.0062 21.5 9.3 44 8-52 22-65 (148)
174 3qou_A Protein YBBN; thioredox 27.7 1.7E+02 0.0059 24.2 7.3 33 8-40 220-252 (287)
175 3gw4_A Uncharacterized protein 26.9 1.9E+02 0.0066 21.4 18.9 75 120-207 105-179 (203)
176 3iyk_A VP5; icosahedral virus; 26.3 3.5E+02 0.012 25.9 9.5 196 21-229 121-337 (526)
177 3qky_A Outer membrane assembly 26.3 2.4E+02 0.0084 22.3 16.3 64 8-71 53-125 (261)
178 2if4_A ATFKBP42; FKBP-like, al 26.3 54 0.0019 28.5 3.9 49 149-203 196-258 (338)
179 1wao_1 Serine/threonine protei 26.1 1.1E+02 0.0037 28.1 6.1 9 151-159 59-67 (477)
180 2yhc_A BAMD, UPF0169 lipoprote 25.5 2.4E+02 0.0083 22.0 8.0 46 8-53 42-89 (225)
181 2xev_A YBGF; tetratricopeptide 24.7 1.7E+02 0.0058 20.0 9.9 57 10-67 5-63 (129)
182 3ub0_A Non-structural protein 24.4 55 0.0019 27.4 3.3 39 148-206 19-57 (199)
183 4h7y_A Dual specificity protei 24.2 85 0.0029 25.6 4.3 72 116-201 11-86 (161)
184 2oo2_A Hypothetical protein AF 23.7 61 0.0021 23.6 3.1 45 83-135 9-55 (86)
185 2pmr_A Uncharacterized protein 23.5 1.4E+02 0.0048 21.7 5.0 43 84-134 8-58 (87)
186 2vsy_A XCC0866; transferase, g 22.3 4.4E+02 0.015 23.9 15.0 32 8-39 24-55 (568)
187 3urz_A Uncharacterized protein 22.2 2.8E+02 0.0094 21.5 13.9 28 13-40 60-87 (208)
188 2w9y_A CE-FAR-7, fatty acid/re 21.8 27 0.00093 27.9 0.9 74 95-171 61-136 (140)
189 2c2l_A CHIP, carboxy terminus 20.8 1.3E+02 0.0043 25.1 5.1 31 8-38 5-35 (281)
No 1
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=100.00 E-value=9.2e-98 Score=663.46 Aligned_cols=237 Identities=62% Similarity=0.997 Sum_probs=223.7
Q ss_pred hHHhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhCchHHHHHH
Q 024929 6 ERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRI 85 (260)
Q Consensus 6 ~re~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~Lt~eERnLlsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i 85 (260)
+|++++|+|||++||||||||+.+||++++.+++||.||||||||||||+||++|+|||+|++++|+++.+|++.+++.+
T Consensus 3 ~re~lv~~AklaeqaeRyddM~~~Mk~v~~~~~eLt~EERnLLSvAYKNvig~rR~swRiissieqke~~~~~~~~~~~i 82 (248)
T 3uzd_A 3 DREQLVQKARLAEQAERYDDMAAAMKNVTELNEPLSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTSADGNEKKIEMV 82 (248)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCC-HHHH
T ss_pred cHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhhccCCHHHHHHH
Confidence 69999999999999999999999999999999999999999999999999999999999999999999877888889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC--hhHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHHHHHh
Q 024929 86 KEYRQKVESELSDICNDIMTVIDEHLIPSASAG--ESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAE 163 (260)
Q Consensus 86 ~~yk~kie~EL~~~C~eii~lId~~Lip~~~~~--eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~ 163 (260)
++||++|++||..+|++||++||++|||.++++ ++||||+|||||||||+|||..|++|++++++|+++|++|+++|+
T Consensus 83 ~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~~~a~~aY~~A~~iA~ 162 (248)
T 3uzd_A 83 RAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISK 162 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHhcCCcCCCcchhHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCccchHhHHHHHHHHHhhHhhhccCCCCCC
Q 024929 164 ADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDG 242 (260)
Q Consensus 164 ~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ld~l~ee~y~ds~~IlqLLrDNl~lW~~e~~~~~ 242 (260)
.+||||||||||||||||||||||+|+|++||.||++|||+||++||+|+|++|+|||+||||||||||+||++.++++
T Consensus 163 ~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd~Ai~eld~l~eesykDstlImqLLRDNLtlWts~~~~~~ 241 (248)
T 3uzd_A 163 EHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDD 241 (248)
T ss_dssp HHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC-------
T ss_pred hhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHhhcccCcccc
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999877665
No 2
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=100.00 E-value=3.8e-97 Score=662.18 Aligned_cols=237 Identities=75% Similarity=1.135 Sum_probs=227.8
Q ss_pred CCCchhHHhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhCchH
Q 024929 1 MASSKERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEV 80 (260)
Q Consensus 1 ~~~~~~re~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~Lt~eERnLlsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~~~ 80 (260)
|.++.+|++++|+|||++||||||||+++||++++.+++||.||||||||||||+||+||+|||+|++++|+++.+|++.
T Consensus 25 ~~~m~~re~lv~~AKLaeqaeRYddMv~~MK~v~~~~~eLt~EERNLLSvAYKNvIgarR~swRiissieqkee~~g~~~ 104 (261)
T 3ubw_A 25 MGSMDDREDLVYQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGED 104 (261)
T ss_dssp -----CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHH
T ss_pred hhhhhhHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHhccCCchhHHHHHhHHHHhhhccccHH
Confidence 55567899999999999999999999999999999999999999999999999999999999999999999998888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHHH
Q 024929 81 NAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATT 160 (260)
Q Consensus 81 ~~~~i~~yk~kie~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~ 160 (260)
+++.+++||++|++||..+|++||++||++|||.++++|+||||+|||||||||+|||..|++|++++++|+++|++|++
T Consensus 105 ~~~~i~~yr~kIe~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlAE~~~g~~rk~~~e~a~~aY~~A~~ 184 (261)
T 3ubw_A 105 KLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASD 184 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCcHHHHHHHHHhhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCccchHhHHHHHHHHHhhHhhhccC
Q 024929 161 AAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSD 237 (260)
Q Consensus 161 ~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ld~l~ee~y~ds~~IlqLLrDNl~lW~~e 237 (260)
+|+.+||||||||||||||||||||||+|+|++||.|||+|||+||++||+|+|++|+|||+||||||||||+|+++
T Consensus 185 iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd~Ai~eLd~L~eesykDstlImQLLRDNLtlWts~ 261 (261)
T 3ubw_A 185 IAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSD 261 (261)
T ss_dssp HHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhccChhhhHHHHHHHHHHHHHHHhhcCC
Confidence 99889999999999999999999999999999999999999999999999999999999999999999999999974
No 3
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=100.00 E-value=5.9e-97 Score=654.57 Aligned_cols=230 Identities=59% Similarity=0.944 Sum_probs=226.9
Q ss_pred hHHhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhCchHHHHHH
Q 024929 6 ERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRI 85 (260)
Q Consensus 6 ~re~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~Lt~eERnLlsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i 85 (260)
+|++++|+|||++||||||||+++||++++.+++||.||||||||||||+||++|+|||+|++++|+++.+|++.+++.+
T Consensus 7 ~re~~v~~AklaeqaeRyddM~~~mk~v~~~~~eLs~EERnLLSvaYKNvig~rR~swRiissieqke~~~~~~~~~~~i 86 (236)
T 3iqu_A 7 ERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAWRVLSSIEQKSNEEGSEEKGPEV 86 (236)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCCCCCSHH
T ss_pred cHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHhhcCCHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999888888889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHHHHHhhc
Q 024929 86 KEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEAD 165 (260)
Q Consensus 86 ~~yk~kie~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~ 165 (260)
++||++|++||..+|++||++||++|||.++++|+||||+|||||||||+|||..|++|++++++|+++|++|+++|+++
T Consensus 87 ~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~e~a~~aY~~A~~iA~~~ 166 (236)
T 3iqu_A 87 REYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKE 166 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCccCCchHHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999989
Q ss_pred CCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCccchHhHHHHHHHHHhhHhhhc
Q 024929 166 LPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWT 235 (260)
Q Consensus 166 L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ld~l~ee~y~ds~~IlqLLrDNl~lW~ 235 (260)
||||||||||||||||||||||+|+|++||.+||+|||+||++||+|+|++|+|||+||||||||||+||
T Consensus 167 L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd~Ai~eld~l~eesykDstlImqLLRDNLtlWt 236 (236)
T 3iqu_A 167 MPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWT 236 (236)
T ss_dssp SCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhccChhhhHHHHHHHHHHHHHHhccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999997
No 4
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=100.00 E-value=1.7e-95 Score=653.67 Aligned_cols=240 Identities=70% Similarity=1.087 Sum_probs=224.4
Q ss_pred CchhHHhHHHHHHHHHHhCCHHHHHHHHHHHHhcC--CCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhCchH
Q 024929 3 SSKERENFVYVAKLAEQAERYDEMVDAMKNVAKLD--VELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEV 80 (260)
Q Consensus 3 ~~~~re~l~~~AklaeqaeRy~Dm~~~mk~~i~~~--~~Lt~eERnLlsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~~~ 80 (260)
++++|++++|+|||++|||||+||+.+||++++.+ ++||.||||||||||||+||++|+|||+|++++|+++.+|++.
T Consensus 4 ~~~~re~~v~~AkLaeqaeRyddm~~~mk~v~~~~~~~eLt~EERnLLSvaYKNvig~rR~swRiissieqke~~k~~~~ 83 (260)
T 1o9d_A 4 APTAREENVYMAKLAEQAERYEEMVEFMEKVSNSLGSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEE 83 (260)
T ss_dssp -CCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHH
T ss_pred ccccHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHhhccCcHH
Confidence 55689999999999999999999999999999998 9999999999999999999999999999999999998888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHHH
Q 024929 81 NAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATT 160 (260)
Q Consensus 81 ~~~~i~~yk~kie~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~ 160 (260)
+++.+++||++|++||..+|++||++||++|||.++++|++|||+|||||||||+|||..|++|++++++|+++|++|++
T Consensus 84 ~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~~ 163 (260)
T 1o9d_A 84 HVNSIREYRSKIENELSKICDGILKLLDAKLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQD 163 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCCCCCCchhHHHHHHHhccHHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCccchHhHHHHHHHHHhhHhhhccCCCC
Q 024929 161 AAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPE 240 (260)
Q Consensus 161 ~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ld~l~ee~y~ds~~IlqLLrDNl~lW~~e~~~ 240 (260)
+|+.+|||||||||||+||||||||||+|+|++||.||++|||+||++||+|+|++|+|+|+||||||||||+|+++.++
T Consensus 164 iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~Ai~eld~L~EesykDstlImqLLRDNLtlWts~~~~ 243 (260)
T 1o9d_A 164 IATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQD 243 (260)
T ss_dssp HHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTC-----CHHHHHHHHHHHHHHHTC----
T ss_pred HHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhhhccChhhhHHHHHHHHHHHHHHHHhhhccCc
Confidence 99889999999999999999999999999999999999999999999999999999999999999999999999998766
Q ss_pred CC
Q 024929 241 DG 242 (260)
Q Consensus 241 ~~ 242 (260)
++
T Consensus 244 ~~ 245 (260)
T 1o9d_A 244 DG 245 (260)
T ss_dssp --
T ss_pred cc
Confidence 55
No 5
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=100.00 E-value=1.3e-94 Score=640.26 Aligned_cols=233 Identities=75% Similarity=1.138 Sum_probs=227.0
Q ss_pred chhHHhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhCchHHHH
Q 024929 4 SKERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAK 83 (260)
Q Consensus 4 ~~~re~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~Lt~eERnLlsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~ 83 (260)
|++|++++|+|||++|||||+||+.+||++++.+++||.||||||||||||+||++|+|||+|++++|+++.+|++.+++
T Consensus 2 m~~re~~v~~AklaeqaeRyddm~~~mk~v~~~~~eLt~EERnLLsvayKnvig~rR~swRiissieqk~~~k~~~~~~~ 81 (234)
T 2br9_A 2 MDDREDLVYQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGEDKLK 81 (234)
T ss_dssp --CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred cchHHHHHHHHHHHHHHhCHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhccCchHHHH
Confidence 34799999999999999999999999999999999999999999999999999999999999999999998888888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHHHHHh
Q 024929 84 RIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAE 163 (260)
Q Consensus 84 ~i~~yk~kie~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~ 163 (260)
.+++||++|++||..+|++|+++||++|||.++++|++|||+|||||||||+|||..|++|++++++|+++|++|+++|+
T Consensus 82 ~i~~yr~kie~EL~~iC~~il~lld~~Lip~a~~~eskVFy~KmKGDyyRYlaE~~~g~~r~~~~e~a~~aY~~A~~iA~ 161 (234)
T 2br9_A 82 MIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAM 161 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHhhccCCCchHhHHHHHHHhccHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCccchHhHHHHHHHHHhhHhhhcc
Q 024929 164 ADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTS 236 (260)
Q Consensus 164 ~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ld~l~ee~y~ds~~IlqLLrDNl~lW~~ 236 (260)
.+||||||+||||+||||||||||+|+|++||.||++|||+|++++|+|+|++|+|+|+||||||||||+||+
T Consensus 162 ~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd~Ai~eld~l~eesykDstlImqLLrDNLtlWts 234 (234)
T 2br9_A 162 TELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTS 234 (234)
T ss_dssp HHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC-
T ss_pred ccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhccChhhhHHHHHHHHHHHHHHHhhcC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999985
No 6
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=100.00 E-value=9.4e-94 Score=641.98 Aligned_cols=233 Identities=63% Similarity=0.997 Sum_probs=226.8
Q ss_pred chhHHhHHHHHHHHHHhCCHHHHHHHHHHHHhcC---CCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhCchH
Q 024929 4 SKERENFVYVAKLAEQAERYDEMVDAMKNVAKLD---VELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEV 80 (260)
Q Consensus 4 ~~~re~l~~~AklaeqaeRy~Dm~~~mk~~i~~~---~~Lt~eERnLlsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~~~ 80 (260)
+.+|++++|+|||++|||||+||+.+||++++.+ ++||.||||||||||||+||++|+|||+|++++|+++.+|++.
T Consensus 25 ~~~re~~v~~AkLaeqaeRyddmv~~mk~v~~~~~~~~eLt~EERnLLSvAyKNvIg~rR~swRiissieqke~~k~~~~ 104 (260)
T 2npm_A 25 VNARESNVYMAKLAEQAERYDEMAKYMKDVVEARQESEELTVEERNLLSVAYKNAVGSRRSSWRIISSVEQKEHSRNAED 104 (260)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHH
T ss_pred cccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhccCcHH
Confidence 4579999999999999999999999999999988 9999999999999999999999999999999999998888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHHH
Q 024929 81 NAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATT 160 (260)
Q Consensus 81 ~~~~i~~yk~kie~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~ 160 (260)
+++.+++||++|++||..+|++||++||++|||.++++|++|||+|||||||||+|||..|++|++++++|+++|++|++
T Consensus 105 ~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~~ 184 (260)
T 2npm_A 105 ASKMCGKYRSKVEAELTDICNDILTMLDKHLIPTATSPDSKVFYFKMKGDYHRYISEFSTGDSKQSSAEDALKAYKDATV 184 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhccCCCchHHHHHHHHHhccHHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCccchHhHHHHHHHHHhhHhhhccC
Q 024929 161 AAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSD 237 (260)
Q Consensus 161 ~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ld~l~ee~y~ds~~IlqLLrDNl~lW~~e 237 (260)
+| .+||||||||||||||||||||||+|++++||.||++|||+||++||+|+|++|+|+|+||||||||||+|+++
T Consensus 185 iA-~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~Ai~eld~L~eesykDstlImqLLRDNLtlWts~ 260 (260)
T 2npm_A 185 VA-KDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFEMAIEQLDKLSEDCYKDSTLIMQLLRDNLTLWTAD 260 (260)
T ss_dssp HH-TTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHTTGGGCCTTTHHHHHHHHHHHHHHHHHHTC-
T ss_pred HH-HhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhcCChhhhHHHHHHHHHHHHHHHHhccC
Confidence 99 89999999999999999999999999999999999999999999999999999999999999999999999974
No 7
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=100.00 E-value=4.6e-90 Score=617.94 Aligned_cols=227 Identities=24% Similarity=0.410 Sum_probs=196.4
Q ss_pred hHHhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhh-hhhCc-hHHHH
Q 024929 6 ERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKE-EAKGN-EVNAK 83 (260)
Q Consensus 6 ~re~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~Lt~eERnLlsvAyKn~i~~~R~s~R~l~~ieqk~-~~~~~-~~~~~ 83 (260)
+|++++|+|||++||||||||+++| ++.+++||.||||||||||||+||++|+|||+|++++|++ +.+|+ +.+++
T Consensus 28 ~r~~lv~~AKLaeqaeRYddMv~~M---~e~~~eLs~EERNLLSvAYKNvIgarR~swRiissieqke~e~kg~~~~~~~ 104 (268)
T 3efz_A 28 KLSEGAYRAKLADMVGNYKDVIKVL---TESSDFRDNSLILLLAGSLRNRVTSIRNSLKSIKSQEEKLRKEKSLNNEFIQ 104 (268)
T ss_dssp ------------------CHHHHHH---TC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
T ss_pred CHHHHHHHHHHHHHhccHHHHHHHH---HhcCCcCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHHhhhccCChHHHHH
Confidence 5999999999999999999999999 7889999999999999999999999999999999999999 67777 88899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHHHHHh
Q 024929 84 RIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAE 163 (260)
Q Consensus 84 ~i~~yk~kie~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~ 163 (260)
.+++||++|++||..+|++||++||++|||.++++ ++|||+|||||||||+|||..|++|++++++|+++|++|+++|+
T Consensus 105 ~i~~yr~kie~EL~~iC~diL~llD~~Lip~a~~~-skVFY~KMKGDYyRYlAE~~~g~erk~~~e~a~~aYq~A~eiA~ 183 (268)
T 3efz_A 105 VIEDIKRDFEESILLESEDVIRIIDDNLLMYSEEG-ARAFCIKLKGDLMRYKAEILKDEEKNQCIKQAVEFYEDALQRER 183 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGCCHH-HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCch-hHHHHHhccchHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999 99999999999999999999999999999999999999999998
Q ss_pred hcC--CCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH---HHHhhcccCccchHhHHHHHHHHHhhHhhhccCC
Q 024929 164 ADL--PPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE---AISELDTLNEESYKDSTLIMQLLRDNLTLWTSDI 238 (260)
Q Consensus 164 ~~L--~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~---Ai~~ld~l~ee~y~ds~~IlqLLrDNl~lW~~e~ 238 (260)
++| |||||||||||||||||||||+|+|++||.+||+|||+ ||++||+|+|++ |+||||||||||+||++.
T Consensus 184 ~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde~~~AIaeld~L~ees----tlImQLLRDNLtlWtsd~ 259 (268)
T 3efz_A 184 SFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQAAENSRSDSEQFSENT----EKLLKILRDNVSQWEQGC 259 (268)
T ss_dssp HHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTCCC--CCCHHH----HHHHHHHHHHHHHHTTTC
T ss_pred HhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHhccCChHH----HHHHHHHHHHHHHhhccc
Confidence 889 99999999999999999999999999999999999999 999999999987 999999999999999986
Q ss_pred CC
Q 024929 239 PE 240 (260)
Q Consensus 239 ~~ 240 (260)
++
T Consensus 260 ~~ 261 (268)
T 3efz_A 260 SG 261 (268)
T ss_dssp CT
T ss_pred cc
Confidence 54
No 8
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=100.00 E-value=6.9e-82 Score=554.18 Aligned_cols=215 Identities=21% Similarity=0.239 Sum_probs=199.0
Q ss_pred hHHhHH---HHHHHHHHhCCHHHHHHHHHHHHh----cCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhCc
Q 024929 6 ERENFV---YVAKLAEQAERYDEMVDAMKNVAK----LDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGN 78 (260)
Q Consensus 6 ~re~l~---~~AklaeqaeRy~Dm~~~mk~~i~----~~~~Lt~eERnLlsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~ 78 (260)
+|++++ |+|||++||||||||+++||++++ .+++||.||||||||||||+||++|+|||+|++++|++ +|+
T Consensus 2 ~re~~v~~~~~AKlaeqaeRyddM~~~mk~v~~~~~~~~~eLt~EERnLLSvAYKNvig~rR~swRiissiEqke--k~~ 79 (227)
T 2o8p_A 2 EMDERLLQKYRAQVFEWGGCFDKMFEALKSLIYLSEFENSEFDDEERHLLTLCIKHKISDYRTMTSQVLQEQTKQ--LNN 79 (227)
T ss_dssp -CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--CSC
T ss_pred cHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHHH--cCC
Confidence 488999 999999999999999999999999 89999999999999999999999999999999999998 677
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHH
Q 024929 79 EVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETA 158 (260)
Q Consensus 79 ~~~~~~i~~yk~kie~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A 158 (260)
+.+++.+++||++|++||..+|++|+++||++|||.+ |+||||+|||||||||+|||..|+ +++|+++|++|
T Consensus 80 ~~~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a---EskVFY~KMKGDYyRYlAE~~~g~-----~e~a~~aY~~A 151 (227)
T 2o8p_A 80 DELVKICSEYVFSLRKDIKAFLQSFEDCVDRLVEKSF---FSKFFKLKVKSDISRYKLEFGLCS-----LEDSKKIHQDA 151 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCSH---HHHHHHHHHHHHHHHHHHHTTSSC-----HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhccCcH---HHHHHHHHHhhhHHHHHHHHcccc-----HHHHHHHHHHH
Confidence 8889999999999999999999999999999999987 999999999999999999999998 89999999999
Q ss_pred HHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH---HHhhcccCccchHhHHHHHHHHHhhHh
Q 024929 159 TTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEA---ISELDTLNEESYKDSTLIMQLLRDNLT 232 (260)
Q Consensus 159 ~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~A---i~~ld~l~ee~y~ds~~IlqLLrDNl~ 232 (260)
+++|+++|||||||||||+||||||||||+|+|++||.+|++||+.+ +..-+. .+.++++|+|+|+|||||.
T Consensus 152 ~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~~~~~~~~~E~--m~~~~~~~~~~q~~~d~~~ 226 (227)
T 2o8p_A 152 FTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKILELQIKEQEN--MDRKAQITVYLQGIKDYIE 226 (227)
T ss_dssp HHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHCCC--HHHHHHHHHHHHHHC----
T ss_pred HHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHhhcccc--chhHHHHHHHHHHHHHhcc
Confidence 99999899999999999999999999999999999999999999976 333333 2358889999999999984
No 9
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=95.94 E-value=0.2 Score=40.93 Aligned_cols=157 Identities=13% Similarity=0.130 Sum_probs=91.6
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhCchHHHHHHHHH
Q 024929 9 NFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEY 88 (260)
Q Consensus 9 ~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~Lt~eERnLlsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i~~y 88 (260)
-+..++.+....|+|++.+.++.+++................+ |..+-.+-.. .++. .
T Consensus 45 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~-----------~~~l~~~~~~---~g~~--~------ 102 (283)
T 3edt_B 45 MLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAAT-----------LNNLAVLYGK---RGKY--K------ 102 (283)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHH-----------HHHHHHHHHT---TTCH--H------
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHH-----------HHHHHHHHHH---hccH--H------
Confidence 3456788888889999999988888753110000000011111 1112111111 1111 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHHHHHhhcCCC
Q 024929 89 RQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPP 168 (260)
Q Consensus 89 k~kie~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~p 168 (260)
+-...+..++.+.....-| +....+..+...|..|...-. .+.|...|++|+.+++...++
T Consensus 103 ------~A~~~~~~al~~~~~~~~~---~~~~~~~~~~~la~~~~~~g~----------~~~A~~~~~~al~~~~~~~~~ 163 (283)
T 3edt_B 103 ------EAEPLCKRALEIREKVLGK---FHPDVAKQLNNLALLCQNQGK----------AEEVEYYYRRALEIYATRLGP 163 (283)
T ss_dssp ------HHHHHHHHHHHHHHHHHCT---TCHHHHHHHHHHHHHHHTTTC----------HHHHHHHHHHHHHHHHHHSCT
T ss_pred ------HHHHHHHHHHHHHHHHcCC---CChHHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHHHhcCC
Confidence 1223334444444443333 122334444456666644422 357999999999998877888
Q ss_pred CCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024929 169 THPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIS 207 (260)
Q Consensus 169 t~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~ 207 (260)
.+|.......+.+..++. +|+.++|+...++++..+-.
T Consensus 164 ~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~l~~~~~ 201 (283)
T 3edt_B 164 DDPNVAKTKNNLASCYLK-QGKYQDAETLYKEILTRAHE 201 (283)
T ss_dssp TCHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHH
Confidence 899888888888877776 69999999999999876543
No 10
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=95.17 E-value=1.1 Score=36.99 Aligned_cols=185 Identities=15% Similarity=0.119 Sum_probs=103.0
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhc-------CCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhh-hh--hC
Q 024929 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKL-------DVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKE-EA--KG 77 (260)
Q Consensus 8 e~l~~~AklaeqaeRy~Dm~~~mk~~i~~-------~~~Lt~eERnLlsvAyKn~i~~~R~s~R~l~~ieqk~-~~--~~ 77 (260)
+-+..++.+....|+|++.+.++++++.. +......=...+..+|-. .+....|...+....... .. ..
T Consensus 28 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~ 106 (311)
T 3nf1_A 28 RTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRD-QNKYKDAANLLNDALAIREKTLGKD 106 (311)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 45667888999999999999999998864 222222233334444322 233334444433211110 00 00
Q ss_pred chHHH----HHHHHHH-HHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhccccccccccccchhHHHHHHHHH
Q 024929 78 NEVNA----KRIKEYR-QKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSM 152 (260)
Q Consensus 78 ~~~~~----~~i~~yk-~kie~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~ 152 (260)
.+... ....-|. ..=-++-...+...+.+.....-+ +....+..+-..|..|... ++ .+.|.
T Consensus 107 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~---~~~~~~~~~~~la~~~~~~-----~~-----~~~A~ 173 (311)
T 3nf1_A 107 HPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGK---DHPDVAKQLNNLALLCQNQ-----GK-----YEEVE 173 (311)
T ss_dssp CHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCT---TCHHHHHHHHHHHHHHHTT-----TC-----HHHHH
T ss_pred ChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCC---CChHHHHHHHHHHHHHHHc-----CC-----HHHHH
Confidence 01100 0011010 000122334444555554433222 1222333334455555333 11 36799
Q ss_pred HHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024929 153 KAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIS 207 (260)
Q Consensus 153 ~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~ 207 (260)
..|++|+.++....++.+|.......+.+..++. .|+.++|+...++++..+-.
T Consensus 174 ~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~ 227 (311)
T 3nf1_A 174 YYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLK-QGKFKQAETLYKEILTRAHE 227 (311)
T ss_dssp HHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHH
Confidence 9999999999877788888888888888877776 69999999999999876543
No 11
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=95.13 E-value=0.86 Score=35.36 Aligned_cols=160 Identities=17% Similarity=0.165 Sum_probs=83.1
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhCchHHHHHH-HH
Q 024929 9 NFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRI-KE 87 (260)
Q Consensus 9 ~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~Lt~eERnLlsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i-~~ 87 (260)
-+..++.+..+-|+|++++.+.+++++.+|.- .+=...+..+|-. .+....+...+........ ........+ .-
T Consensus 7 iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~la~~~~~-~~~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~ 82 (184)
T 3vtx_A 7 IYMDIGDKKRTKGDFDGAIRAYKKVLKADPNN-VETLLKLGKTYMD-IGLPNDAIESLKKFVVLDT--TSAEAYYILGSA 82 (184)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCC--CCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHH-CCCHHHHHHHHHHHHhcCc--hhHHHHHHHHHH
Confidence 45568899999999999999999999988764 4445555555543 2334444444443222211 111100000 00
Q ss_pred HH--HHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHHHHHhhc
Q 024929 88 YR--QKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEAD 165 (260)
Q Consensus 88 yk--~kie~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~ 165 (260)
+. ... ++-...+..++. +-|. + . ..+...|..|.-+ |+ -+.|.+.|++|+++
T Consensus 83 ~~~~~~~-~~a~~~~~~a~~-----~~~~--~--~--~~~~~lg~~~~~~-----g~-----~~~A~~~~~~~l~~---- 136 (184)
T 3vtx_A 83 NFMIDEK-QAAIDALQRAIA-----LNTV--Y--A--DAYYKLGLVYDSM-----GE-----HDKAIEAYEKTISI---- 136 (184)
T ss_dssp HHHTTCH-HHHHHHHHHHHH-----HCTT--C--H--HHHHHHHHHHHHT-----TC-----HHHHHHHHHHHHHH----
T ss_pred HHHcCCH-HHHHHHHHHHHH-----hCcc--c--h--HHHHHHHHHHHHh-----CC-----chhHHHHHHHHHHh----
Confidence 00 000 111111222221 2232 1 1 1222345544322 11 35788999998865
Q ss_pred CCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024929 166 LPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (260)
Q Consensus 166 L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 203 (260)
.|.+| ....|.+..|+ -+|+.++|+..-++|++
T Consensus 137 -~p~~~---~~~~~lg~~~~-~~g~~~~A~~~~~~al~ 169 (184)
T 3vtx_A 137 -KPGFI---RAYQSIGLAYE-GKGLRDEAVKYFKKALE 169 (184)
T ss_dssp -CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred -cchhh---hHHHHHHHHHH-HCCCHHHHHHHHHHHHh
Confidence 34554 34445555555 47999999987776653
No 12
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=93.09 E-value=0.58 Score=44.66 Aligned_cols=100 Identities=6% Similarity=0.037 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCcch
Q 024929 94 SELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHPIR 173 (260)
Q Consensus 94 ~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~Pir 173 (260)
+|-..+|...+.+-...|=|.. + ..+=-+.--|..|+..-. -+.|...|++|+++-+..|+|.||.-
T Consensus 326 ~eA~~l~~~aL~~~~~~lg~~H--p-~~a~~~~nLa~~y~~~g~----------~~eA~~~~~~aL~i~~~~lG~~Hp~~ 392 (490)
T 3n71_A 326 HEVVKLCRECLEKQEPVFADTN--L-YVLRLLSIASEVLSYLQA----------YEEASHYARRMVDGYMKLYHHNNAQL 392 (490)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTS--H-HHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHHHSCTTCHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCC--H-HHHHHHHHHHHHHHHhcC----------HHHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 3556677777877776664432 1 112122223444433311 25689999999999988999999999
Q ss_pred HHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024929 174 LGLALNFSVFYYEIMNSPERACHLAKQAFDEAIS 207 (260)
Q Consensus 174 LgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~ 207 (260)
+....|.++.|+. .|+.++|..+.++|+.--..
T Consensus 393 a~~l~nLa~~~~~-~G~~~eA~~~~~~Al~i~~~ 425 (490)
T 3n71_A 393 GMAVMRAGLTNWH-AGHIEVGHGMICKAYAILLV 425 (490)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHH
Confidence 9999999998887 69999999999999765443
No 13
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=92.38 E-value=0.81 Score=42.75 Aligned_cols=58 Identities=14% Similarity=0.085 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024929 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIS 207 (260)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~ 207 (260)
+.|...|++|+.+-+..++|.||.......|.++-|.. .|+.++|..+.++|++--..
T Consensus 346 ~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~-~g~~~eA~~~~~~Al~i~~~ 403 (429)
T 3qwp_A 346 EEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLH-QGMFPQAMKNLRLAFDIMRV 403 (429)
T ss_dssp HHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHHHHH
Confidence 57999999999999889999999999999999998877 69999999999988875544
No 14
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=92.11 E-value=0.97 Score=42.42 Aligned_cols=100 Identities=14% Similarity=0.089 Sum_probs=70.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCcch
Q 024929 94 SELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHPIR 173 (260)
Q Consensus 94 ~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~Pir 173 (260)
+|-..+|...+.+-.+.|=|.. + ..+=-+.--|.-|+.. |. -+.|...|++|+++-+..++|.||--
T Consensus 315 ~eA~~~~~~~L~i~~~~lg~~H--p-~~a~~~~nLa~~y~~~-----g~-----~~eA~~~~~~aL~i~~~~lG~~Hp~~ 381 (433)
T 3qww_A 315 SELLEICELSQEKMSSVFEDSN--V-YMLHMMYQAMGVCLYM-----QD-----WEGALKYGQKIIKPYSKHYPVYSLNV 381 (433)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTS--H-HHHHHHHHHHHHHHHT-----TC-----HHHHHHHHHHHHHHHHHHSCSSCHHH
T ss_pred HHHHHHHHHHHHHhhCccChhc--h-HHHHHHHHHHHHHHhh-----cC-----HHHHHHHHHHHHHHHHHHcCCCChHH
Confidence 4556677777777776665532 1 1111112233333222 11 25799999999999988999999999
Q ss_pred HHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024929 174 LGLALNFSVFYYEIMNSPERACHLAKQAFDEAIS 207 (260)
Q Consensus 174 LgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~ 207 (260)
.....|.++-|+. .|+.++|..+-++|+.=-..
T Consensus 382 a~~l~nLa~~~~~-qg~~~eA~~~~~~Al~i~~~ 414 (433)
T 3qww_A 382 ASMWLKLGRLYMG-LENKAAGEKALKKAIAIMEV 414 (433)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-ccCHHHHHHHHHHHHHHHHH
Confidence 9999999988776 69999999999988776554
No 15
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=92.07 E-value=4.4 Score=33.30 Aligned_cols=190 Identities=11% Similarity=0.023 Sum_probs=98.4
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHH----HHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhCchHHH
Q 024929 7 RENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEE----RNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNA 82 (260)
Q Consensus 7 re~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~Lt~eE----RnLlsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~ 82 (260)
-..+...+....+.|+|++.+.++++++...|. +.+. ...+..+|- ..+....+...+.....-....+.....
T Consensus 5 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~ 82 (338)
T 3ro2_A 5 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTE-DLKTLSAIYSQLGNAYF-YLHDYAKALEYHHHDLTLARTIGDQLGE 82 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHhhcccccHHH
Confidence 346778899999999999999999999987655 2221 123333332 2233344444443221111111111100
Q ss_pred -----HHHHHH-HHHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhccccccccccc----------cchhHHH
Q 024929 83 -----KRIKEY-RQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFK----------FGDEKKE 146 (260)
Q Consensus 83 -----~~i~~y-k~kie~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~----------~~~~~~~ 146 (260)
....-| ...--++-...+...+.+... ..+....+..+...|..|...-... ...+-..
T Consensus 83 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 157 (338)
T 3ro2_A 83 AKASGNLGNTLKVLGNFDEAIVCCQRHLDISRE-----LNDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRN 157 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-----TTCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH-----hcCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHHH
Confidence 000001 000112233344445544433 2233334445555666666554411 1122334
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 024929 147 AAANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAI 206 (260)
Q Consensus 147 ~~~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai 206 (260)
..+.|...|++|+.++.. .+ .+|.......+.+.. |.-.|+.++|+...++++.-+-
T Consensus 158 ~~~~A~~~~~~a~~~~~~-~~-~~~~~~~~~~~l~~~-~~~~~~~~~A~~~~~~a~~~~~ 214 (338)
T 3ro2_A 158 ALQAAVDLYEENLSLVTA-LG-DRAAQGRAFGNLGNT-HYLLGNFRDAVIAHEQRLLIAK 214 (338)
T ss_dssp HHHHHHHHHHHHHHHHHH-HT-CHHHHHHHHHHHHHH-HHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh-cC-CHHHHHHHHHHHHHH-HHHhCCHHHHHHHHHHHHHHHH
Confidence 467888889998888754 22 234333344444444 4457999999999888876644
No 16
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=92.06 E-value=1.1 Score=36.23 Aligned_cols=95 Identities=16% Similarity=0.161 Sum_probs=64.1
Q ss_pred HHHHHHHHHHHhhcCCCCCCChhHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHh
Q 024929 98 DICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHPIRLGLA 177 (260)
Q Consensus 98 ~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~PirLgLa 177 (260)
.++...+++....+-+ +....+-.+...|..|...-. .+.|...|++|+.++...+.+.+|......
T Consensus 22 ~~~~~al~~~~~~~~~---~~~~~~~~~~~l~~~~~~~g~----------~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 88 (283)
T 3edt_B 22 PLCKQALEDLEKTSGH---DHPDVATMLNILALVYRDQNK----------YKEAAHLLNDALAIREKTLGKDHPAVAATL 88 (283)
T ss_dssp HHHHHHHHHHHHHHCS---SSHHHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHHHTCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHhcCC---CCHHHHHHHHHHHHHHHHccc----------HHHHHHHHHHHHHHHHHHcCCcchHHHHHH
Confidence 3344455555444422 222334444456766654432 357899999999999877788888777777
Q ss_pred hhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 024929 178 LNFSVFYYEIMNSPERACHLAKQAFDEAI 206 (260)
Q Consensus 178 LN~SVF~yEi~~~~~~A~~iAk~afd~Ai 206 (260)
.+.+..++ ..|+.++|+...++|+.-+-
T Consensus 89 ~~l~~~~~-~~g~~~~A~~~~~~al~~~~ 116 (283)
T 3edt_B 89 NNLAVLYG-KRGKYKEAEPLCKRALEIRE 116 (283)
T ss_dssp HHHHHHHH-TTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-HhccHHHHHHHHHHHHHHHH
Confidence 77777666 47999999999998887653
No 17
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=91.81 E-value=5.3 Score=33.75 Aligned_cols=72 Identities=11% Similarity=0.088 Sum_probs=55.3
Q ss_pred HHHhhccccccccccccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024929 124 FYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (260)
Q Consensus 124 y~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 203 (260)
.+...|..|..+-. -++|...|++|+++++ .++..+|....+..|.+..|++ +|+.++|+...++|++
T Consensus 157 ~~~~lg~~y~~~g~----------~~~A~~~~~~al~~~~-~~~~~~~~~~~~~~nlg~~y~~-~~~y~~A~~~~~~al~ 224 (293)
T 3u3w_A 157 IENAIANIYAENGY----------LKKGIDLFEQILKQLE-ALHDNEEFDVKVRYNHAKALYL-DSRYEESLYQVNKAIE 224 (293)
T ss_dssp HHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHH-HSSCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHH-hcccchhHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHH
Confidence 34456766644322 3679999999999986 4666777777788999998887 6999999999999987
Q ss_pred HHHH
Q 024929 204 EAIS 207 (260)
Q Consensus 204 ~Ai~ 207 (260)
-+..
T Consensus 225 ~~~~ 228 (293)
T 3u3w_A 225 ISCR 228 (293)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7643
No 18
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=91.25 E-value=8.1 Score=34.76 Aligned_cols=49 Identities=14% Similarity=0.107 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024929 148 AANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEA 205 (260)
Q Consensus 148 ~~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~A 205 (260)
.+.|...|++|+++ .|.+| ....+.+..|+ -+|+.++|+...+++++-.
T Consensus 444 ~~~A~~~~~~a~~~-----~p~~~---~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~ 492 (537)
T 3fp2_A 444 FNAAIKLLTKACEL-----DPRSE---QAKIGLAQLKL-QMEKIDEAIELFEDSAILA 492 (537)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHH-HhccHHHHHHHHHHHHHhC
Confidence 46788888888765 34555 34455555555 4799999999888776654
No 19
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=91.10 E-value=6.5 Score=33.40 Aligned_cols=57 Identities=18% Similarity=0.271 Sum_probs=35.6
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHH
Q 024929 9 NFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILS 67 (260)
Q Consensus 9 ~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~Lt~eERnLlsvAyKn~i~~~R~s~R~l~ 67 (260)
-+..++.+..+.|+|++.+.++++++..+|. +.+=...+..+|-. .+....+...+.
T Consensus 100 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~-~g~~~~A~~~~~ 156 (368)
T 1fch_A 100 AWQYLGTTQAENEQELLAISALRRCLELKPD-NQTALMALAVSFTN-ESLQRQACEILR 156 (368)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHCcCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 4566778888888888888888888877665 33444445555433 334444444444
No 20
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=90.98 E-value=6 Score=32.77 Aligned_cols=46 Identities=15% Similarity=0.114 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHH
Q 024929 148 AANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAF 202 (260)
Q Consensus 148 ~~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~af 202 (260)
.+.|...|++|+++. |.+| ....+.+..++ -+|+.++|+...++++
T Consensus 252 ~~~A~~~~~~a~~~~-----~~~~---~~~~~la~~~~-~~g~~~~A~~~~~~al 297 (330)
T 3hym_B 252 YAEALDYHRQALVLI-----PQNA---STYSAIGYIHS-LMGNFENAVDYFHTAL 297 (330)
T ss_dssp HHHHHHHHHHHHHHS-----TTCS---HHHHHHHHHHH-HHTCHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHhhC-----ccch---HHHHHHHHHHH-HhccHHHHHHHHHHHH
Confidence 357888999998663 3343 23344455444 4799999988766654
No 21
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=90.89 E-value=5.8 Score=32.51 Aligned_cols=55 Identities=16% Similarity=-0.005 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 024929 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAI 206 (260)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai 206 (260)
+.|...|++|++++.. . .+|...+.+++.-...|...|+.++|+...+++++-+-
T Consensus 200 ~~A~~~~~~a~~~~~~-~--~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 254 (338)
T 3ro2_A 200 RDAVIAHEQRLLIAKE-F--GDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLAR 254 (338)
T ss_dssp HHHHHHHHHHHHHHHH-H--TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh-c--CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 5788899999988864 2 23444454554445555567999999998888876543
No 22
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=90.87 E-value=5.6 Score=32.25 Aligned_cols=53 Identities=11% Similarity=0.029 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024929 150 NSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (260)
Q Consensus 150 ~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 203 (260)
.|...|++|+++....-.+.++.......+.+.+ |...|+.++|+...++++.
T Consensus 197 ~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~A~~~~~~al~ 249 (272)
T 3u4t_A 197 LAKPYYEKLIEVCAPGGAKYKDELIEANEYIAYY-YTINRDKVKADAAWKNILA 249 (272)
T ss_dssp TTHHHHHHHHHHHGGGGGGGHHHHHHHHHHHHHH-HHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccchHHHHHHHHHHHHH-HHHcCCHHHHHHHHHHHHh
Confidence 4788999999998543222222222344444444 4457999999988777654
No 23
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=90.78 E-value=5.4 Score=31.89 Aligned_cols=60 Identities=13% Similarity=0.031 Sum_probs=42.8
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 024929 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSS 68 (260)
Q Consensus 8 e~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~Lt~eERnLlsvAyKn~i~~~R~s~R~l~~ 68 (260)
+.+..++.+..+.|+|++.+.++.+++..+|.-+..-...+..+|-. .+....|...+..
T Consensus 8 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~ 67 (228)
T 4i17_A 8 NQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADN-IKKYKEAADYFDI 67 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHH-hhcHHHHHHHHHH
Confidence 56788999999999999999999999988874444444445555543 3455556665543
No 24
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=90.45 E-value=2.6 Score=36.95 Aligned_cols=73 Identities=19% Similarity=0.209 Sum_probs=48.9
Q ss_pred hHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHH-hhhHHHHHHHHhCChHHHHHHH
Q 024929 120 STVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHPIRLGL-ALNFSVFYYEIMNSPERACHLA 198 (260)
Q Consensus 120 skvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~PirLgL-aLN~SVF~yEi~~~~~~A~~iA 198 (260)
...+|+-.+|.+|...-. -+.|...|++|+.++.. ++ +|...+. ..+.+..|+ .+|+.++|+...
T Consensus 101 l~~~~~~~~g~~~~~~g~----------~~~A~~~~~~al~~~~~-~~--~~~~~a~~~~~lg~~~~-~~~~~~~A~~~~ 166 (383)
T 3ulq_A 101 LEYYFNFFRGMYELDQRE----------YLSAIKFFKKAESKLIF-VK--DRIEKAEFFFKMSESYY-YMKQTYFSMDYA 166 (383)
T ss_dssp HHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHTTGGG-CC--CHHHHHHHHHHHHHHHH-HTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcC----------HHHHHHHHHHHHHHHhh-CC--CHHHHHHHHHHHHHHHH-HcCCHHHHHHHH
Confidence 345666678887754422 35789999999988753 32 3444444 445555555 489999999998
Q ss_pred HHHHHHHH
Q 024929 199 KQAFDEAI 206 (260)
Q Consensus 199 k~afd~Ai 206 (260)
++|++-+-
T Consensus 167 ~~al~~~~ 174 (383)
T 3ulq_A 167 RQAYEIYK 174 (383)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88876543
No 25
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=90.24 E-value=1.4 Score=41.28 Aligned_cols=58 Identities=9% Similarity=0.015 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024929 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIS 207 (260)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~ 207 (260)
+.|...|++|+++.+..|.|.||..+...-|.+.-|.. +|+.++|..+.++|+.--..
T Consensus 315 ~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~-~g~~~eA~~~~~~aL~i~~~ 372 (433)
T 3qww_A 315 SELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLY-MQDWEGALKYGQKIIKPYSK 372 (433)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHH
Confidence 56788999999999889999999999988888887776 79999999999999776544
No 26
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=89.96 E-value=9 Score=33.21 Aligned_cols=190 Identities=14% Similarity=0.079 Sum_probs=97.9
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCH---HHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhCchHHH--
Q 024929 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTV---EERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNA-- 82 (260)
Q Consensus 8 e~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~Lt~---eERnLlsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~-- 82 (260)
..+..++....+.|+|++.+.++++++...+.-.. .=...+..+|- ..+....+...+....+.....+.....
T Consensus 49 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 127 (411)
T 4a1s_A 49 LELALEGERLCNAGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYF-YLGDYNKAMQYHKHDLTLAKSMNDRLGEAK 127 (411)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHccCchHHHH
Confidence 45667888889999999999999999987665221 11233333333 2344444555443322111101111000
Q ss_pred ---HHHHHH-HHHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccccccc-------ccchhHHHHHHHH
Q 024929 83 ---KRIKEY-RQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEF-------KFGDEKKEAAANS 151 (260)
Q Consensus 83 ---~~i~~y-k~kie~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~-------~~~~~~~~~~~~A 151 (260)
....-| ...=-++-...+...+.+.... .+....+..+...|..|...-.. ....+-....+.|
T Consensus 128 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A 202 (411)
T 4a1s_A 128 SSGNLGNTLKVMGRFDEAAICCERHLTLARQL-----GDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRA 202 (411)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHh-----hchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHH
Confidence 000000 0000123334444555544332 12223333344455555444330 0012223446789
Q ss_pred HHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 024929 152 MKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAI 206 (260)
Q Consensus 152 ~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai 206 (260)
...|++|++++.. + +.+|.......+.+..++ -.|+.++|+...++|+.-.-
T Consensus 203 ~~~~~~al~~~~~-~-~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~ 254 (411)
T 4a1s_A 203 VEFYQENLKLMRD-L-GDRGAQGRACGNLGNTYY-LLGDFQAAIEHHQERLRIAR 254 (411)
T ss_dssp HHHHHHHHHHHHH-H-TCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-c-CCHHHHHHHHHHHHHHHH-HcCChHHHHHHHHHHHHHHH
Confidence 9999999998864 2 223444444455555444 57999999999888876554
No 27
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=89.67 E-value=8.1 Score=32.22 Aligned_cols=47 Identities=11% Similarity=0.087 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024929 148 AANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (260)
Q Consensus 148 ~~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 203 (260)
.+.|...|++|+++ .|.+| ....+.+..++ ..|+.++|+...++|+.
T Consensus 288 ~~~A~~~~~~~~~~-----~~~~~---~~~~~~~~~~~-~~g~~~~A~~~~~~a~~ 334 (359)
T 3ieg_A 288 PVEAIRICSEVLQM-----EPDNV---NALKDRAEAYL-IEEMYDEAIQDYEAAQE 334 (359)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHh-----CcccH---HHHHHHHHHHH-HcCCHHHHHHHHHHHHh
Confidence 35678888888765 34444 34555555554 47999998887776653
No 28
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=89.64 E-value=9.8 Score=33.15 Aligned_cols=176 Identities=7% Similarity=-0.008 Sum_probs=89.5
Q ss_pred HHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHH-----HHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhCc-hHHHHHH
Q 024929 12 YVAKLAEQAERYDEMVDAMKNVAKLDVELTVE-----ERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGN-EVNAKRI 85 (260)
Q Consensus 12 ~~AklaeqaeRy~Dm~~~mk~~i~~~~~Lt~e-----ERnLlsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~-~~~~~~i 85 (260)
+++.+....|+|++++.++++++..-...... =...+..+|-. .+..-.|...+.....--...+. ......+
T Consensus 108 ~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 186 (383)
T 3ulq_A 108 FRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYY-MKQTYFSMDYARQAYEIYKEHEAYNIRLLQC 186 (383)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHTCSTTHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHhCccchHHHHHH
Confidence 37888889999999999999998753332221 22333444332 23333333333221111000111 0000000
Q ss_pred -----HHHHH-HHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHH
Q 024929 86 -----KEYRQ-KVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETAT 159 (260)
Q Consensus 86 -----~~yk~-kie~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~ 159 (260)
.-|.. .=-++=...+...+.+.... .+.......+.-.|..|..+-. -+.|...|++|+
T Consensus 187 ~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~lg~~y~~~g~----------~~~A~~~~~~al 251 (383)
T 3ulq_A 187 HSLFATNFLDLKQYEDAISHFQKAYSMAEAE-----KQPQLMGRTLYNIGLCKNSQSQ----------YEDAIPYFKRAI 251 (383)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-----TCHHHHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHc-----CChHHHHHHHHHHHHHHHHCCC----------HHHHHHHHHHHH
Confidence 00000 00012223344444444321 2223333333446666644321 367999999999
Q ss_pred HHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 024929 160 TAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAI 206 (260)
Q Consensus 160 ~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai 206 (260)
++++..-. .|.......|.+..|+. +|+.++|+...++|+.-+-
T Consensus 252 ~~~~~~~~--~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~ 295 (383)
T 3ulq_A 252 AVFEESNI--LPSLPQAYFLITQIHYK-LGKIDKAHEYHSKGMAYSQ 295 (383)
T ss_dssp HHHHHTTC--GGGHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHhhcc--chhHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHH
Confidence 99865322 14444455566665554 7999999999988877653
No 29
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=89.50 E-value=1.7 Score=41.45 Aligned_cols=58 Identities=19% Similarity=0.123 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024929 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIS 207 (260)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~ 207 (260)
+.|...|++|+++.+.-|.|.||-.+...-|.+..|.. .|+.++|..+.++|++--..
T Consensus 326 ~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~-~g~~~eA~~~~~~aL~i~~~ 383 (490)
T 3n71_A 326 HEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSY-LQAYEEASHYARRMVDGYMK 383 (490)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHH
Confidence 35677899999999889999999999999999888876 69999999999999876544
No 30
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=89.03 E-value=12 Score=33.24 Aligned_cols=49 Identities=14% Similarity=0.132 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHH
Q 024929 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAF 202 (260)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~af 202 (260)
++|...|++|+++ .|.++..-.+.+++..|++...|+.++|+..-++|+
T Consensus 351 ~~A~~~~~kaL~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~Ai~~y~kal 399 (472)
T 4g1t_A 351 EEAEYYFQKEFSK-----ELTPVAKQLLHLRYGNFQLYQMKCEDKAIHHFIEGV 399 (472)
T ss_dssp HHHHHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 5789999999853 344455556678888888778899999987665554
No 31
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=88.18 E-value=13 Score=32.88 Aligned_cols=55 Identities=16% Similarity=0.108 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHhhcC--CCCC----cchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024929 148 AANSMKAYETATTAAEADL--PPTH----PIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (260)
Q Consensus 148 ~~~A~~aY~~A~~~a~~~L--~pt~----PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 203 (260)
.+.|...|++++..-...+ .|.+ |.......+.+..++. .|+.++|+...++++.
T Consensus 205 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~~l~ 265 (514)
T 2gw1_A 205 YDKADESFTKAARLFEEQLDKNNEDEKLKEKLAISLEHTGIFKFL-KNDPLGAHEDIKKAIE 265 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHHHHHHHH-SSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhhccCccccccChHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHh
Confidence 4678888888887433223 4444 5555566666666655 6999999998887764
No 32
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=88.06 E-value=16 Score=33.60 Aligned_cols=173 Identities=18% Similarity=0.122 Sum_probs=89.4
Q ss_pred HhHHHHHHHHHHhCCH-HHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhCchHHHHHHH
Q 024929 8 ENFVYVAKLAEQAERY-DEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIK 86 (260)
Q Consensus 8 e~l~~~AklaeqaeRy-~Dm~~~mk~~i~~~~~Lt~eERnLlsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i~ 86 (260)
.-+..++++....|+| ++.+.++++++..+|.. .+=...|..+|-.. +....|...+....+.... ......+-.
T Consensus 103 ~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~-~~a~~~lg~~~~~~-g~~~~A~~~~~~al~~~p~--~~~~~~lg~ 178 (474)
T 4abn_A 103 QALMLKGKALNVTPDYSPEAEVLLSKAVKLEPEL-VEAWNQLGEVYWKK-GDVTSAHTCFSGALTHCKN--KVSLQNLSM 178 (474)
T ss_dssp HHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHH-TCHHHHHHHHHHHHTTCCC--HHHHHHHHH
T ss_pred HHHHHHHHHHHhccccHHHHHHHHHHHHhhCCCC-HHHHHHHHHHHHHc-CCHHHHHHHHHHHHhhCCC--HHHHHHHHH
Confidence 3456777777778888 88888888888776653 44455555555432 4444444444332211110 011111111
Q ss_pred HHHH----------HHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhccccccccccccchhHHHHHHHHHHHHH
Q 024929 87 EYRQ----------KVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYE 156 (260)
Q Consensus 87 ~yk~----------kie~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~ 156 (260)
-|.. .=-++-...+...+.+ -|.. ..+ +-..|..|.... |..+. ...-.+.|..+|+
T Consensus 179 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~-----~p~~----~~~--~~~lg~~~~~~~-~~~~~-~~g~~~~A~~~~~ 245 (474)
T 4abn_A 179 VLRQLQTDSGDEHSRHVMDSVRQAKLAVQM-----DVLD----GRS--WYILGNAYLSLY-FNTGQ-NPKISQQALSAYA 245 (474)
T ss_dssp HHTTCCCSCHHHHHHHHHHHHHHHHHHHHH-----CTTC----HHH--HHHHHHHHHHHH-HHTTC-CHHHHHHHHHHHH
T ss_pred HHHHhccCChhhhhhhHHHHHHHHHHHHHh-----CCCC----HHH--HHHHHHHHHHHH-Hhhcc-ccchHHHHHHHHH
Confidence 1111 0012223333444332 2321 122 223455544330 11121 1123578999999
Q ss_pred HHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024929 157 TATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (260)
Q Consensus 157 ~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 203 (260)
+|+.+ .|.+|-......|.+..|+. +|+.++|+...++|+.
T Consensus 246 ~al~~-----~p~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 286 (474)
T 4abn_A 246 QAEKV-----DRKASSNPDLHLNRATLHKY-EESYGEALEGFSQAAA 286 (474)
T ss_dssp HHHHH-----CGGGGGCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHh-----CCCcccCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 99876 23222555667777777776 6999999988777754
No 33
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=87.06 E-value=6.8 Score=28.23 Aligned_cols=149 Identities=11% Similarity=0.081 Sum_probs=78.5
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhCchHHHHHHHHH
Q 024929 9 NFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEY 88 (260)
Q Consensus 9 ~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~Lt~eERnLlsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i~~y 88 (260)
-+..++.+....|+|++.+.++.+.+...+.... ......++ ..+..+-.. .++. ...+
T Consensus 11 ~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~--~~~~~~~~-----------~~l~~~~~~---~g~~--~~A~--- 69 (164)
T 3ro3_A 11 AFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGD--KAAERIAY-----------SNLGNAYIF---LGEF--ETAS--- 69 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC--HHHHHHHH-----------HHHHHHHHH---TTCH--HHHH---
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCC--chHHHHHH-----------HHHHHHHHH---cCCH--HHHH---
Confidence 4567888888999999999999998865322111 11111122 112111111 1111 1122
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHHHHHhhcCCC
Q 024929 89 RQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPP 168 (260)
Q Consensus 89 k~kie~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~p 168 (260)
..+...+.+.... .++...+..+...|..|...-. -+.|...|++|++++.. .+
T Consensus 70 ---------~~~~~a~~~~~~~-----~~~~~~~~~~~~l~~~~~~~~~----------~~~A~~~~~~a~~~~~~-~~- 123 (164)
T 3ro3_A 70 ---------EYYKKTLLLARQL-----KDRAVEAQSCYSLGNTYTLLQD----------YEKAIDYHLKHLAIAQE-LK- 123 (164)
T ss_dssp ---------HHHHHHHHHHHHT-----TCHHHHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHH-TT-
T ss_pred ---------HHHHHHHHHHHHh-----CCcHHHHHHHHHHHHHHHHHhh----------HHHHHHHHHHHHHHHHH-cc-
Confidence 2233333333221 1222333333445555543311 35789999999999864 22
Q ss_pred CCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024929 169 THPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEA 205 (260)
Q Consensus 169 t~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~A 205 (260)
.+|.......+.+..+ .-.|+.++|+...++|+.-+
T Consensus 124 ~~~~~~~~~~~la~~~-~~~g~~~~A~~~~~~a~~~~ 159 (164)
T 3ro3_A 124 DRIGEGRACWSLGNAY-TALGNHDQAMHFAEKHLEIS 159 (164)
T ss_dssp CHHHHHHHHHHHHHHH-HHHTCHHHHHHHHHHHHHHH
T ss_pred chHhHHHHHHHHHHHH-HHccCHHHHHHHHHHHHHHH
Confidence 2333334444555544 45799999999888877654
No 34
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=86.77 E-value=1.9 Score=32.13 Aligned_cols=48 Identities=15% Similarity=0.235 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024929 148 AANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 204 (260)
Q Consensus 148 ~~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~ 204 (260)
-+.|...|++|+++ .|.+| .+..|.+..|+. +|+.++|+...++|+.-
T Consensus 24 ~~~A~~~y~~Al~~-----~p~~~---~~~~nlg~~~~~-~~~~~~A~~~~~~al~~ 71 (127)
T 4gcn_A 24 FEKAHVHYDKAIEL-----DPSNI---TFYNNKAAVYFE-EKKFAECVQFCEKAVEV 71 (127)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCCH---HHHHhHHHHHHH-hhhHHHHHHHHHHHHHh
Confidence 35799999999865 45554 345677777776 79999999988888764
No 35
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=86.57 E-value=4.2 Score=35.64 Aligned_cols=75 Identities=15% Similarity=0.110 Sum_probs=51.1
Q ss_pred hhHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHH
Q 024929 119 ESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLA 198 (260)
Q Consensus 119 eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iA 198 (260)
....+|+-.+|.+|...-. -+.|...|++|+.++.. ++ .+|..-....|.+.+|+. +|+.++|+...
T Consensus 98 ~l~~~~~~~~g~~~~~~g~----------~~~A~~~~~~al~~~~~-~~-~~~~~a~~~~~lg~~y~~-~~~~~~A~~~~ 164 (378)
T 3q15_A 98 LLKYYSLFFRGMYEFDQKE----------YVEAIGYYREAEKELPF-VS-DDIEKAEFHFKVAEAYYH-MKQTHVSMYHI 164 (378)
T ss_dssp HHHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHTTGGG-CC-CHHHHHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCC----------HHHHHHHHHHHHHHHhh-CC-ChHHHHHHHHHHHHHHHH-cCCcHHHHHHH
Confidence 3445566678887754422 35789999999998853 33 334444455566666554 79999999999
Q ss_pred HHHHHHHH
Q 024929 199 KQAFDEAI 206 (260)
Q Consensus 199 k~afd~Ai 206 (260)
++|++-.-
T Consensus 165 ~~al~~~~ 172 (378)
T 3q15_A 165 LQALDIYQ 172 (378)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 98876554
No 36
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=86.47 E-value=14 Score=31.40 Aligned_cols=53 Identities=17% Similarity=0.062 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHH-HhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024929 149 ANSMKAYETATTAAEADLPPTHPIRLG-LALNFSVFYYEIMNSPERACHLAKQAFDEA 205 (260)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLg-LaLN~SVF~yEi~~~~~~A~~iAk~afd~A 205 (260)
+.|...|++|+.++.. . + +|..++ ...|.+.. |..+|+.++|+...++|+.-+
T Consensus 204 ~~A~~~~~~al~~~~~-~-~-~~~~~~~~~~~la~~-~~~~g~~~~A~~~~~~al~~~ 257 (406)
T 3sf4_A 204 RDAVIAHEQRLLIAKE-F-G-DKAAERRAYSNLGNA-YIFLGEFETASEYYKKTLLLA 257 (406)
T ss_dssp HHHHHHHHHHHHHHHH-T-T-CHHHHHHHHHHHHHH-HHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh-c-C-CcHHHHHHHHHHHHH-HHHcCChHHHHHHHHHHHHHH
Confidence 5678888888888754 2 2 233333 33444444 444788888888887776544
No 37
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=85.92 E-value=15 Score=31.23 Aligned_cols=59 Identities=10% Similarity=-0.055 Sum_probs=42.1
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 024929 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSS 68 (260)
Q Consensus 8 e~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~Lt~eERnLlsvAyKn~i~~~R~s~R~l~~ 68 (260)
+.++.++....+.|+|++.+.++++++..+|.- .+=...+..+|-. .+....|...+..
T Consensus 66 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~lg~~~~~-~g~~~~A~~~~~~ 124 (365)
T 4eqf_A 66 PGAFEEGLKRLKEGDLPVTILFMEAAILQDPGD-AEAWQFLGITQAE-NENEQAAIVALQR 124 (365)
T ss_dssp TTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcCC-HHHHHHHHHHHHH-CCCHHHHHHHHHH
Confidence 357888999999999999999999999887653 4445555555543 3445555555543
No 38
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=85.91 E-value=2.1 Score=39.94 Aligned_cols=58 Identities=9% Similarity=0.036 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024929 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIS 207 (260)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~ 207 (260)
+.|...|++|+++.+.-|+|.||..+...-|.+.-|.. +|+.++|..+.++++.--..
T Consensus 304 ~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~-~g~~~eA~~~~~~~L~i~~~ 361 (429)
T 3qwp_A 304 EQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACIN-LGLLEEALFYGTRTMEPYRI 361 (429)
T ss_dssp HHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHhHHH
Confidence 45667777777776678999999999999998887766 69999999999998766544
No 39
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=85.65 E-value=16 Score=31.13 Aligned_cols=189 Identities=11% Similarity=0.032 Sum_probs=95.9
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCH---HHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhCchHHH---
Q 024929 9 NFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTV---EERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNA--- 82 (260)
Q Consensus 9 ~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~Lt~---eERnLlsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~--- 82 (260)
.+..++...-+.|+|++.+.++.+++...|.-.. .=...+..+|-. .+....+...+.....-....+.....
T Consensus 11 ~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 89 (406)
T 3sf4_A 11 ELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFY-LHDYAKALEYHHHDLTLARTIGDQLGEAKA 89 (406)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHhccccHHHHHH
Confidence 4567888889999999999999999987665322 122234444332 233444444443211111101111100
Q ss_pred --HHHHHHH-HHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhccccccccc-------ccc---chhHHHHHH
Q 024929 83 --KRIKEYR-QKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAE-------FKF---GDEKKEAAA 149 (260)
Q Consensus 83 --~~i~~yk-~kie~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE-------~~~---~~~~~~~~~ 149 (260)
....-|. ..=-++-...+...+.+.... .+....+..+-..|..|...-. ... .++.....+
T Consensus 90 ~~~la~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~ 164 (406)
T 3sf4_A 90 SGNLGNTLKVLGNFDEAIVCCQRHLDISREL-----NDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQ 164 (406)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc-----ccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHH
Confidence 0000010 000123334444555444332 1222222233334444433322 111 123344577
Q ss_pred HHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 024929 150 NSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAI 206 (260)
Q Consensus 150 ~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai 206 (260)
.|...|++|+.++.. + +.+|.......|.+..++ -+|+.++|+...++|+.-+-
T Consensus 165 ~A~~~~~~al~~~~~-~-~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~ 218 (406)
T 3sf4_A 165 AAVDFYEENLSLVTA-L-GDRAAQGRAFGNLGNTHY-LLGNFRDAVIAHEQRLLIAK 218 (406)
T ss_dssp HHHHHHHHHHHHHHH-T-TCHHHHHHHHHHHHHHHH-HHTBHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh-c-cCcHHHHHHHHHHHHHHH-HccCHHHHHHHHHHHHHHHH
Confidence 899999999998864 3 234444445555555555 47999999999888876644
No 40
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=85.41 E-value=22 Score=35.35 Aligned_cols=166 Identities=12% Similarity=0.114 Sum_probs=86.0
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHH-HhhhhhhhCch-HHHHHH
Q 024929 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSS-IEQKEEAKGNE-VNAKRI 85 (260)
Q Consensus 8 e~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~Lt~eERnLlsvAyKn~i~~~R~s~R~l~~-ieqk~~~~~~~-~~~~~i 85 (260)
+-+..++.+..+.|+|++++.+.+++++.+|+.. +=.+-|..+|.. .+..-.|...+.. ++-+.. .. ....+-
T Consensus 10 ~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~-~a~~nLg~~l~~-~g~~~eA~~~~~~Al~l~P~---~~~a~~nLg 84 (723)
T 4gyw_A 10 DSLNNLANIKREQGNIEEAVRLYRKALEVFPEFA-AAHSNLASVLQQ-QGKLQEALMHYKEAIRISPT---FADAYSNMG 84 (723)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCH-HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTT---CHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH-HHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCC---CHHHHHHHH
Confidence 5567899999999999999999999999988753 344455555543 2333344433322 111110 00 011100
Q ss_pred HHHH--HHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHHHHHh
Q 024929 86 KEYR--QKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAE 163 (260)
Q Consensus 86 ~~yk--~kie~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~ 163 (260)
.-|. .+. ++=...++..++ +-|.. ..++ ...|..|+-+ | -.+.|..+|++|+++
T Consensus 85 ~~l~~~g~~-~~A~~~~~kAl~-----l~P~~----~~a~--~~Lg~~~~~~-----g-----~~~eAi~~~~~Al~l-- 140 (723)
T 4gyw_A 85 NTLKEMQDV-QGALQCYTRAIQ-----INPAF----ADAH--SNLASIHKDS-----G-----NIPEAIASYRTALKL-- 140 (723)
T ss_dssp HHHHHTTCH-HHHHHHHHHHHH-----HCTTC----HHHH--HHHHHHHHHT-----T-----CHHHHHHHHHHHHHH--
T ss_pred HHHHHcCCH-HHHHHHHHHHHH-----hCCCC----HHHH--HHHHHHHHHc-----C-----CHHHHHHHHHHHHHh--
Confidence 0010 001 111111222221 12321 2222 2245444322 1 145788889988864
Q ss_pred hcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhh
Q 024929 164 ADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISEL 209 (260)
Q Consensus 164 ~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~l 209 (260)
.|.+|- ...|.+. .|..+|+.++|++..+++.+-.-..+
T Consensus 141 ---~P~~~~---a~~~L~~-~l~~~g~~~~A~~~~~kal~l~~~~~ 179 (723)
T 4gyw_A 141 ---KPDFPD---AYCNLAH-CLQIVCDWTDYDERMKKLVSIVADQL 179 (723)
T ss_dssp ---CSCCHH---HHHHHHH-HHHHTTCCTTHHHHHHHHHHHHHHHH
T ss_pred ---CCCChH---HHhhhhh-HHHhcccHHHHHHHHHHHHHhChhHH
Confidence 355542 3334443 34457889999888888877665544
No 41
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=85.36 E-value=22 Score=32.48 Aligned_cols=47 Identities=9% Similarity=0.107 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024929 148 AANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (260)
Q Consensus 148 ~~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 203 (260)
.+.|...|++++++ .|.+| ....+.+.. |...|+.++|....+++++
T Consensus 532 ~~~A~~~~~~~~~~-----~p~~~---~~~~~l~~~-~~~~g~~~~A~~~~~~~l~ 578 (597)
T 2xpi_A 532 YDAAIDALNQGLLL-----STNDA---NVHTAIALV-YLHKKIPGLAITHLHESLA 578 (597)
T ss_dssp HHHHHHHHHHHHHH-----SSCCH---HHHHHHHHH-HHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCCh---HHHHHHHHH-HHHhCCHHHHHHHHHHHHh
Confidence 45788888888765 25555 233333333 4458999999988777665
No 42
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=84.93 E-value=13 Score=29.32 Aligned_cols=59 Identities=8% Similarity=0.059 Sum_probs=35.1
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 024929 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSS 68 (260)
Q Consensus 8 e~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~Lt~eERnLlsvAyKn~i~~~R~s~R~l~~ 68 (260)
.-+..+|.+..+.|+|++.+.++++++...+.. ..-...+..+|-. .+....+...+..
T Consensus 58 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~~la~~~~~-~~~~~~A~~~~~~ 116 (243)
T 2q7f_A 58 IPYINFANLLSSVNELERALAFYDKALELDSSA-ATAYYGAGNVYVV-KEMYKEAKDMFEK 116 (243)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcc-hHHHHHHHHHHHH-hccHHHHHHHHHH
Confidence 345567788888888888888888888766542 3333334444432 3344445555443
No 43
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=84.87 E-value=19 Score=31.41 Aligned_cols=47 Identities=11% Similarity=0.094 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024929 148 AANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (260)
Q Consensus 148 ~~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 203 (260)
.+.|...|++|+.+ .|.+| ....+.+..+. ..|+.++|+...++++.
T Consensus 311 ~~~A~~~~~~a~~~-----~p~~~---~~~~~l~~~~~-~~~~~~~A~~~~~~al~ 357 (450)
T 2y4t_A 311 PVEAIRVCSEVLQM-----EPDNV---NALKDRAEAYL-IEEMYDEAIQDYETAQE 357 (450)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHh-----CcccH---HHHHHHHHHHH-HhcCHHHHHHHHHHHHH
Confidence 35678888888754 34444 33444444444 57999999988887754
No 44
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=84.68 E-value=19 Score=31.12 Aligned_cols=179 Identities=11% Similarity=0.024 Sum_probs=85.9
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCC-----HHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhCchH---
Q 024929 9 NFVYVAKLAEQAERYDEMVDAMKNVAKLDVELT-----VEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEV--- 80 (260)
Q Consensus 9 ~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~Lt-----~eERnLlsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~~~--- 80 (260)
-+..++.+....|+|++.+.++++++.....+. ..=...+..+|- ..+....+...+.....-....++..
T Consensus 88 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 166 (411)
T 4a1s_A 88 IYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLK-VMGRFDEAAICCERHLTLARQLGDRLSEG 166 (411)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHhhchHHHH
Confidence 355788888889999999999998876421111 111223333332 22334444444432211111011110
Q ss_pred --HHHHHHHHHHH-H-----------------HHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccccccccc
Q 024929 81 --NAKRIKEYRQK-V-----------------ESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKF 140 (260)
Q Consensus 81 --~~~~i~~yk~k-i-----------------e~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~ 140 (260)
...+..-|... - -++-...+...+.+.... .+.......+...|..|...-.
T Consensus 167 ~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~la~~~~~~g~--- 238 (411)
T 4a1s_A 167 RALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDL-----GDRGAQGRACGNLGNTYYLLGD--- 238 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHHHHTTC---
T ss_pred HHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHHHHHHcCC---
Confidence 00111111110 0 133344455555554332 1223334444455665544322
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 024929 141 GDEKKEAAANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAI 206 (260)
Q Consensus 141 ~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai 206 (260)
.+.|...|++|+.++.. . .++...+.+++.-...|--.|+.++|+...++|+..+-
T Consensus 239 -------~~~A~~~~~~al~~~~~-~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 294 (411)
T 4a1s_A 239 -------FQAAIEHHQERLRIARE-F--GDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAV 294 (411)
T ss_dssp -------HHHHHHHHHHHHHHHHH-H--TCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred -------hHHHHHHHHHHHHHHHh-c--CCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHH
Confidence 24677888888887754 1 13333333433333344456888888877777766543
No 45
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=84.20 E-value=21 Score=31.20 Aligned_cols=184 Identities=11% Similarity=0.041 Sum_probs=93.8
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHH-----HHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhCchHHHHH
Q 024929 10 FVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEE-----RNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKR 84 (260)
Q Consensus 10 l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~Lt~eE-----RnLlsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~ 84 (260)
+..++++..+.|+|++++++++++....+.++... ++++...+. ..+..-.+..............++......
T Consensus 58 l~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 136 (434)
T 4b4t_Q 58 ILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQ-VPDSLDDQIFVCEKSIEFAKREKRVFLKHS 136 (434)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHHHHHHHHHHCS-CCSCHHHHHHHHHHHHHHHHHSSCCSSHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHhCccHHHHH
Confidence 67889999999999999999999887656665432 222222221 111222222222211111110111100011
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhc--CCCCCCChhHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHHHHH
Q 024929 85 IKEYRQKVESELSDICNDIMTVIDEHL--IPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAA 162 (260)
Q Consensus 85 i~~yk~kie~EL~~~C~eii~lId~~L--ip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a 162 (260)
+....-++-.+.- -..+.+.++...+ .+...+....+-++-..|..|.-+ ++ .++|...|++|..++
T Consensus 137 ~~~~la~~~~~~g-~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-----~~~A~~~~~~al~~~ 205 (434)
T 4b4t_Q 137 LSIKLATLHYQKK-QYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKL-----RN-----LAKSKASLTAARTAA 205 (434)
T ss_dssp HHHHHHHHHHHHT-CHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHT-----TC-----HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcc-ChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHh-----Cc-----HHHHHHHHHHHHHHh
Confidence 1111111111111 1122233332222 122223334444445555555322 11 357899999999988
Q ss_pred hhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024929 163 EADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIS 207 (260)
Q Consensus 163 ~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~ 207 (260)
.. .+ ..|.-.|...+...-+|...++..+|+..-.++|+..-.
T Consensus 206 ~~-~~-~~~~~~~~~~~~~g~~~~~~~~y~~A~~~~~~a~~~~~~ 248 (434)
T 4b4t_Q 206 NS-IY-CPTQTVAELDLMSGILHCEDKDYKTAFSYFFESFESYHN 248 (434)
T ss_dssp HH-SC-CCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHH
T ss_pred hc-CC-CchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhh
Confidence 53 43 233444666677777777789999999988888876543
No 46
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=83.39 E-value=19 Score=30.19 Aligned_cols=189 Identities=14% Similarity=0.052 Sum_probs=92.2
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHH-----hhhhhhhHHHHHHHHH-HhhhhhhhCchHH
Q 024929 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGY-----KNVIGARRASWRILSS-IEQKEEAKGNEVN 81 (260)
Q Consensus 8 e~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~Lt~eERnLlsvAy-----Kn~i~~~R~s~R~l~~-ieqk~~~~~~~~~ 81 (260)
+.+...+...-..|+|++++.++++.++..+. ..+....+..-| -...+..-.|...+.. +..... ..+...
T Consensus 76 ~~l~~~~~~~~~~~~y~~A~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~ 153 (293)
T 2qfc_A 76 KQFKDQVIMLCKQKRYKEIYNKVWNELKKEEY-HPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLT-GIDVYQ 153 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCC-CHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCC-SSCTTH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHhccccC-ChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhc-CCchHH
Confidence 34556677777889999999999998876655 333322221111 1111233344444432 111111 011110
Q ss_pred -H----HHHHHHHH-HHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhccccccccccccchhHHHHHHHHHHHH
Q 024929 82 -A----KRIKEYRQ-KVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAY 155 (260)
Q Consensus 82 -~----~~i~~yk~-kie~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY 155 (260)
. ....-|.. .=-++-...++..+.+.+. .|. +....+..+-..|..|..+-+ -+.|...|
T Consensus 154 ~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~--~~~--~~~~~~~~~~nlg~~y~~~~~----------y~~Al~~~ 219 (293)
T 2qfc_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEA--LHD--NEEFDVKVRYNHAKALYLDSR----------YEESLYQV 219 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH--SCC--CHHHHHHHHHHHHHHHHHTTC----------HHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh--cCc--cccchHHHHHhHHHHHHHHhh----------HHHHHHHH
Confidence 0 11111111 1112334455555555542 231 122121222335555542211 35799999
Q ss_pred HHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCccchH
Q 024929 156 ETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYK 218 (260)
Q Consensus 156 ~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ld~l~ee~y~ 218 (260)
++|++++.. ..++..++.+++.--..|.-+|+.++|+. ..|+.|+.-.+.++...++
T Consensus 220 ~kal~~~~~---~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~---~~~~~Al~~~~~~~~~~~~ 276 (293)
T 2qfc_A 220 NKAIEISCR---INSMALIGQLYYQRGECLRKLEYEEAEIE---DAYKKASFFFDILEMHAYK 276 (293)
T ss_dssp HHHHHHHHH---TTBCSSHHHHHHHHHHHHHHTTCCHHHHH---HHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHh---cCcHHHHHHHHHHHHHHHHHcCCcHHHHH---HHHHHHHHHHHHhCcHhhH
Confidence 999999853 23444566555555555666899999942 2344444444455555553
No 47
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=82.30 E-value=25 Score=30.70 Aligned_cols=167 Identities=13% Similarity=0.082 Sum_probs=83.6
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhCchH-HHHHHHHH
Q 024929 10 FVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEV-NAKRIKEY 88 (260)
Q Consensus 10 l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~Lt~eERnLlsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~~~-~~~~i~~y 88 (260)
...+|.+..+.|+|++.+.++.+++...|. +..-...+..+|-. .+....+...+........ .+.. ......-|
T Consensus 146 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~-~g~~~~A~~~~~~~~~~~~--~~~~~~~~l~~~~ 221 (450)
T 2y4t_A 146 LRSQALNAFGSGDYTAAIAFLDKILEVCVW-DAELRELRAECFIK-EGEPRKAISDLKAASKLKN--DNTEAFYKISTLY 221 (450)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHH-TTCGGGGHHHHHHHHHHHC--SCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHH-CCCHHHHHHHHHHHHHhCC--CCHHHHHHHHHHH
Confidence 345577788999999999999999987664 34445555555533 3444555555544332211 1111 11111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhc--CCCCCCChhHHHHHHh--------hccccccccccccchhHHHHHHHHHHHHHHH
Q 024929 89 RQKVESELSDICNDIMTVIDEHL--IPSASAGESTVFFYKM--------KGDYYRYLAEFKFGDEKKEAAANSMKAYETA 158 (260)
Q Consensus 89 k~kie~EL~~~C~eii~lId~~L--ip~~~~~eskvfy~Km--------kgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A 158 (260)
... .--.+.+..++..+ -|. +......+..+ .|+.|.- .| -.+.|...|++|
T Consensus 222 ~~~------g~~~~A~~~~~~~~~~~p~--~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g-----~~~~A~~~~~~~ 283 (450)
T 2y4t_A 222 YQL------GDHELSLSEVRECLKLDQD--HKRCFAHYKQVKKLNKLIESAEELIR-----DG-----RYTDATSKYESV 283 (450)
T ss_dssp HHT------TCHHHHHHHHHHHHHHCTT--CHHHHHHHHHHHHHHHHHHHHHHHHH-----HT-----CHHHHHHHHHHH
T ss_pred HHc------CCHHHHHHHHHHHHHhCCC--hHHHHHHHHHHHHHHHHHHHHHHHHH-----cC-----CHHHHHHHHHHH
Confidence 110 01112222222222 232 11111111111 1222211 11 145688888888
Q ss_pred HHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024929 159 TTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (260)
Q Consensus 159 ~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 203 (260)
+++ .|.+|....-++..-...|.-.|+.++|+...++++.
T Consensus 284 l~~-----~p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 323 (450)
T 2y4t_A 284 MKT-----EPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQ 323 (450)
T ss_dssp HHH-----CCSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred Hhc-----CCcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 753 4667765444444444445568999999999888764
No 48
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=81.93 E-value=25 Score=30.52 Aligned_cols=54 Identities=7% Similarity=0.182 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024929 148 AANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEA 205 (260)
Q Consensus 148 ~~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~A 205 (260)
-+.|...|++|++++... .+|.......|.+..++. +|+.++|+...++|+.-+
T Consensus 238 ~~~A~~~~~~al~~~~~~---~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~ 291 (378)
T 3q15_A 238 DQMAVEHFQKAAKVSREK---VPDLLPKVLFGLSWTLCK-AGQTQKAFQFIEEGLDHI 291 (378)
T ss_dssp HHHHHHHHHHHHHHHHHH---CGGGHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHhh---CChhHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHH
Confidence 367999999999998754 345554445555655554 799999998887776643
No 49
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=81.26 E-value=10 Score=31.98 Aligned_cols=91 Identities=10% Similarity=0.004 Sum_probs=53.1
Q ss_pred HHHHHHHHhhcCCCCCCChhH--HHHHHhhccccccccccccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHH-Hh
Q 024929 101 NDIMTVIDEHLIPSASAGEST--VFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHPIRLG-LA 177 (260)
Q Consensus 101 ~eii~lId~~Lip~~~~~esk--vfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~PirLg-La 177 (260)
.+++.+++..+-.....++.+ +.|++..|.+|... ++ .+.|...|++|+++.. +..++.... +.
T Consensus 92 ~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~-----~~~Ai~~~~~al~~~~---~~~~~~~~~~~~ 158 (293)
T 3u3w_A 92 KEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKK-----VD-----YEYCILELKKLLNQQL---TGIDVYQNLYIE 158 (293)
T ss_dssp HHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTS-----SC-----HHHHHHHHHHHHHTCC---CCSCTTHHHHHH
T ss_pred HHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHcc-----cC-----HHHHHHHHHHHHHHhc---ccccHHHHHHHH
Confidence 345555555443322333333 44556567765322 11 3568999999998542 233333333 34
Q ss_pred hhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024929 178 LNFSVFYYEIMNSPERACHLAKQAFDEA 205 (260)
Q Consensus 178 LN~SVF~yEi~~~~~~A~~iAk~afd~A 205 (260)
.|.+++|+. +|+.++|+..-++|++.+
T Consensus 159 ~~lg~~y~~-~g~~~~A~~~~~~al~~~ 185 (293)
T 3u3w_A 159 NAIANIYAE-NGYLKKGIDLFEQILKQL 185 (293)
T ss_dssp HHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-cCCHHHHHHHHHHHHHHH
Confidence 555555554 799999999999988644
No 50
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=81.19 E-value=19 Score=28.64 Aligned_cols=165 Identities=9% Similarity=0.019 Sum_probs=84.3
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhCchH-HHHHHH
Q 024929 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEV-NAKRIK 86 (260)
Q Consensus 8 e~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~Lt~eERnLlsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~~~-~~~~i~ 86 (260)
+-+..+|.+..+.|+|++.+.++++++..+|.. .+-...+..+|-. .+....+...+....+... .+.. ......
T Consensus 38 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~la~~~~~-~~~~~~A~~~~~~a~~~~~--~~~~~~~~la~ 113 (252)
T 2ho1_A 38 DAYIQLGLGYLQRGNTEQAKVPLRKALEIDPSS-ADAHAALAVVFQT-EMEPKLADEEYRKALASDS--RNARVLNNYGG 113 (252)
T ss_dssp HHHHHHHHHHHHTTCTGGGHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCT--TCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHhcCCCh-HHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHCc--CcHHHHHHHHH
Confidence 345678888889999999999999999876553 3444445554433 3445555555544322211 1111 111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHHHHHhhcC
Q 024929 87 EYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADL 166 (260)
Q Consensus 87 ~yk~kie~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L 166 (260)
-|.. ..--.+.+..+++.+- ....+. ....+...|..|... |+ .+.|...|++|+..
T Consensus 114 ~~~~------~g~~~~A~~~~~~~~~-~~~~~~-~~~~~~~la~~~~~~-----g~-----~~~A~~~~~~~~~~----- 170 (252)
T 2ho1_A 114 FLYE------QKRYEEAYQRLLEASQ-DTLYPE-RSRVFENLGLVSLQM-----KK-----PAQAKEYFEKSLRL----- 170 (252)
T ss_dssp HHHH------TTCHHHHHHHHHHHTT-CTTCTT-HHHHHHHHHHHHHHT-----TC-----HHHHHHHHHHHHHH-----
T ss_pred HHHH------HhHHHHHHHHHHHHHh-CccCcc-cHHHHHHHHHHHHHc-----CC-----HHHHHHHHHHHHhc-----
Confidence 1111 1112344445544442 111222 222223345554322 11 35677788887754
Q ss_pred CCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024929 167 PPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (260)
Q Consensus 167 ~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 203 (260)
.|.+| ....+.+..++ ..|+.++|....++++.
T Consensus 171 ~~~~~---~~~~~la~~~~-~~g~~~~A~~~~~~~~~ 203 (252)
T 2ho1_A 171 NRNQP---SVALEMADLLY-KEREYVPARQYYDLFAQ 203 (252)
T ss_dssp CSCCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHT
T ss_pred CcccH---HHHHHHHHHHH-HcCCHHHHHHHHHHHHH
Confidence 23333 23344444444 46888888887777653
No 51
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=80.91 E-value=2.4 Score=32.40 Aligned_cols=54 Identities=19% Similarity=0.276 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHHhhcC---CCC-------CcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024929 149 ANSMKAYETATTAAEADL---PPT-------HPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (260)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L---~pt-------~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 203 (260)
+.|...|++|+.+..... .|+ +|....+.+|.+..|+. +|+.++|+..+.+|+.
T Consensus 28 ~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~~~~~~A~~~~~~al~ 91 (162)
T 3rkv_A 28 KEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLN-IGDLHEAEETSSEVLK 91 (162)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHh
Confidence 578999999999864321 233 67777888888888776 6999999998888754
No 52
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=80.20 E-value=7.2 Score=32.91 Aligned_cols=73 Identities=12% Similarity=0.139 Sum_probs=49.2
Q ss_pred HHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHH
Q 024929 121 TVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQ 200 (260)
Q Consensus 121 kvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~ 200 (260)
.+..+...|..|...-. -+.|...|++|+++++. .|....+...+..|.+..|+. +|+.++|+...++
T Consensus 154 ~~~~~~~lg~~y~~~~~----------~~~A~~~~~kal~~~~~-~~~~~~~~~~~~~nlg~~y~~-~~~y~~Al~~~~k 221 (293)
T 2qfc_A 154 NLYIENAIANIYAENGY----------LKKGIDLFEQILKQLEA-LHDNEEFDVKVRYNHAKALYL-DSRYEESLYQVNK 221 (293)
T ss_dssp HHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHH-SCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHHh-cCccccchHHHHHhHHHHHHH-HhhHHHHHHHHHH
Confidence 34344455666644321 35799999999999863 443222233566777777665 7999999999999
Q ss_pred HHHHH
Q 024929 201 AFDEA 205 (260)
Q Consensus 201 afd~A 205 (260)
|++-+
T Consensus 222 al~~~ 226 (293)
T 2qfc_A 222 AIEIS 226 (293)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98765
No 53
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=79.94 E-value=36 Score=31.04 Aligned_cols=55 Identities=7% Similarity=0.008 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024929 148 AANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 204 (260)
Q Consensus 148 ~~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~ 204 (260)
.+.|.+.|++++++... . +.+|-....+++.-...|-..|+.++|+...++++..
T Consensus 491 ~~~A~~~~~~~~~~~~~-~-~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~ 545 (597)
T 2xpi_A 491 MQTAINHFQNALLLVKK-T-QSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLL 545 (597)
T ss_dssp HHHHHHHHHHHHHHHHH-S-CCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhc-c-ccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 46789999999988643 2 3466553334443344455589999999998888754
No 54
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=79.83 E-value=26 Score=29.46 Aligned_cols=58 Identities=10% Similarity=-0.052 Sum_probs=40.0
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHH
Q 024929 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILS 67 (260)
Q Consensus 8 e~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~Lt~eERnLlsvAyKn~i~~~R~s~R~l~ 67 (260)
..+..++.+..+.|+|++.+.++++++..+|.. ..=...+..+|-. .+....+...+.
T Consensus 65 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~l~~~~~~-~g~~~~A~~~~~ 122 (368)
T 1fch_A 65 PQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPKH-MEAWQYLGTTQAE-NEQELLAISALR 122 (368)
T ss_dssp SSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHH-CcCHHHHHHHHH
Confidence 457889999999999999999999999877653 4444555555433 233444444443
No 55
>3lf9_A 4E10_D0_1IS1A_001_C (T161); epitope-scaffold, immune system; 2.00A {Artificial gene}
Probab=79.71 E-value=8.1 Score=30.17 Aligned_cols=86 Identities=21% Similarity=0.107 Sum_probs=55.6
Q ss_pred CCHHHHHHHHHHHH---hcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHH--Hh--hhhhhhCchHHHHHHHHHHHHHH
Q 024929 21 ERYDEMVDAMKNVA---KLDVELTVEERNLLSVGYKNVIGARRASWRILSS--IE--QKEEAKGNEVNAKRIKEYRQKVE 93 (260)
Q Consensus 21 eRy~Dm~~~mk~~i---~~~~~Lt~eERnLlsvAyKn~i~~~R~s~R~l~~--ie--qk~~~~~~~~~~~~i~~yk~kie 93 (260)
+|.|..++.+|.-+ -++++||.|-|.=|.--.|...-.-|-|+|-+.. .. .+....+ .+-++-....+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~plTEERRKeLVK~akk~aEeaKVAIRNIRRDAnd~lKKl~Kdk-----eISEDe~kr~e 85 (121)
T 3lf9_A 11 ERMDKSVEALKNNLSKVRTGGGGTEERRKDLVKIVRGEAEGGRVAVRNIARDAANDLAALGKDK-----EVNWFDISQAL 85 (121)
T ss_dssp HHHHHHHHHHHHHHHHCCCSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCT-----TSCHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhhcC-----CCCHHHHHhHH
Confidence 56777888887665 3589999999999999888888888888887743 11 0110001 11133444566
Q ss_pred HHHHHHHHHHHHHHHhhc
Q 024929 94 SELSDICNDIMTVIDEHL 111 (260)
Q Consensus 94 ~EL~~~C~eii~lId~~L 111 (260)
++|..+.+..+.-||..|
T Consensus 86 ~eIQKLTDkyIkkID~ll 103 (121)
T 3lf9_A 86 WEIQKLTDVAVKKIDEVL 103 (121)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 666666666666666554
No 56
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=79.26 E-value=27 Score=29.34 Aligned_cols=52 Identities=12% Similarity=-0.017 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchH-HHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024929 148 AANSMKAYETATTAAEADLPPTHPIRL-GLALNFSVFYYEIMNSPERACHLAKQAFD 203 (260)
Q Consensus 148 ~~~A~~aY~~A~~~a~~~L~pt~PirL-gLaLN~SVF~yEi~~~~~~A~~iAk~afd 203 (260)
.+.|..+|++|+++.... . +|... ....|.+.++.. +|+.++|+...+++..
T Consensus 134 ~~~A~~~~~~Al~~~~~~-~--~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 186 (292)
T 1qqe_A 134 YAKAIDCYELAGEWYAQD-Q--SVALSNKCFIKCADLKAL-DGQYIEASDIYSKLIK 186 (292)
T ss_dssp HHHHHHHHHHHHHHHHHT-T--CHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhC-C--ChHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHH
Confidence 367999999999987531 1 23332 345566666665 6999999987666554
No 57
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=78.39 E-value=6.5 Score=29.18 Aligned_cols=46 Identities=17% Similarity=0.185 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024929 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (260)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 203 (260)
+.|.+.|++|+++ .|.+| .+..|.+..|+. +|+.++|+...++|+.
T Consensus 30 ~~A~~~~~~al~~-----~p~~~---~~~~~~~~~~~~-~~~~~~A~~~~~~al~ 75 (126)
T 4gco_A 30 PTAMRHYNEAVKR-----DPENA---ILYSNRAACLTK-LMEFQRALDDCDTCIR 75 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHhhHHHh-hccHHHHHHHHHHHHH
Confidence 5788999998864 34454 455666666665 6999999987777654
No 58
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=78.28 E-value=9.6 Score=27.38 Aligned_cols=73 Identities=16% Similarity=0.200 Sum_probs=47.2
Q ss_pred HHHHHhhccccccccccccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHH
Q 024929 122 VFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQA 201 (260)
Q Consensus 122 vfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~a 201 (260)
+..+-..|..|...-. .+.|...|++|+.++.. .+ .+|.......|.+..++. .|+.++|+...++|
T Consensus 49 ~~~~~~l~~~~~~~g~----------~~~A~~~~~~a~~~~~~-~~-~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~a 115 (164)
T 3ro3_A 49 RIAYSNLGNAYIFLGE----------FETASEYYKKTLLLARQ-LK-DRAVEAQSCYSLGNTYTL-LQDYEKAIDYHLKH 115 (164)
T ss_dssp HHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHH-TT-CHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHHH-hC-CcHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHH
Confidence 3344445666544322 35789999999999864 22 233334445555555554 79999999999988
Q ss_pred HHHHHH
Q 024929 202 FDEAIS 207 (260)
Q Consensus 202 fd~Ai~ 207 (260)
++-+-.
T Consensus 116 ~~~~~~ 121 (164)
T 3ro3_A 116 LAIAQE 121 (164)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 876543
No 59
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=78.24 E-value=21 Score=27.40 Aligned_cols=167 Identities=10% Similarity=-0.023 Sum_probs=85.9
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhCchH-HHHHHH
Q 024929 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEV-NAKRIK 86 (260)
Q Consensus 8 e~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~Lt~eERnLlsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~~~-~~~~i~ 86 (260)
.-+..++.+..+.|+|++.+.++++++...|.. .+-...+..+|-. .+....+...+....+... .+.. ......
T Consensus 9 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~~--~~~~~~~~l~~ 84 (225)
T 2vq2_A 9 NIKTQLAMEYMRGQDYRQATASIEDALKSDPKN-ELAWLVRAEIYQY-LKVNDKAQESFRQALSIKP--DSAEINNNYGW 84 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCT--TCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHhCccc-hHHHHHHHHHHHH-cCChHHHHHHHHHHHHhCC--CChHHHHHHHH
Confidence 345677888999999999999999999876654 3444445555432 3445555555544322211 1111 111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHHHHHhhcC
Q 024929 87 EYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADL 166 (260)
Q Consensus 87 ~yk~kie~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L 166 (260)
-|... ..--.+.+..++..+- ....+. ....+...|..|... |+ .+.|...|+++++.
T Consensus 85 ~~~~~-----~~~~~~A~~~~~~~~~-~~~~~~-~~~~~~~l~~~~~~~-----~~-----~~~A~~~~~~~~~~----- 142 (225)
T 2vq2_A 85 FLCGR-----LNRPAESMAYFDKALA-DPTYPT-PYIANLNKGICSAKQ-----GQ-----FGLAEAYLKRSLAA----- 142 (225)
T ss_dssp HHHTT-----TCCHHHHHHHHHHHHT-STTCSC-HHHHHHHHHHHHHHT-----TC-----HHHHHHHHHHHHHH-----
T ss_pred HHHHh-----cCcHHHHHHHHHHHHc-CcCCcc-hHHHHHHHHHHHHHc-----CC-----HHHHHHHHHHHHHh-----
Confidence 11110 0011223333333332 111121 222333455555332 11 35678888888764
Q ss_pred CCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024929 167 PPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 204 (260)
Q Consensus 167 ~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~ 204 (260)
.|.+| ....+.+..++ -.|+.++|+...++++..
T Consensus 143 ~~~~~---~~~~~la~~~~-~~~~~~~A~~~~~~~~~~ 176 (225)
T 2vq2_A 143 QPQFP---PAFKELARTKM-LAGQLGDADYYFKKYQSR 176 (225)
T ss_dssp STTCH---HHHHHHHHHHH-HHTCHHHHHHHHHHHHHH
T ss_pred CCCCc---hHHHHHHHHHH-HcCCHHHHHHHHHHHHHh
Confidence 23443 23344444444 479999999888877653
No 60
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=78.12 E-value=36 Score=30.03 Aligned_cols=172 Identities=10% Similarity=-0.025 Sum_probs=81.0
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhCchHHHHHHHHH
Q 024929 9 NFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEY 88 (260)
Q Consensus 9 ~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~Lt~eERnLlsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i~~y 88 (260)
-+..++.+..+.|+|++.+.++++++...|.... -...+..+|- ..+....+...+........... ........-|
T Consensus 306 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~-~~~~l~~~~~-~~~~~~~A~~~~~~~~~~~~~~~-~~~~~la~~~ 382 (514)
T 2gw1_A 306 VYYHRGQMNFILQNYDQAGKDFDKAKELDPENIF-PYIQLACLAY-RENKFDDCETLFSEAKRKFPEAP-EVPNFFAEIL 382 (514)
T ss_dssp HHHHHHHHHHHTTCTTHHHHHHHHHHHTCSSCSH-HHHHHHHHTT-TTTCHHHHHHHHHHHHHHSTTCS-HHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHhChhhHH-HHHHHHHHHH-HcCCHHHHHHHHHHHHHHcccCH-HHHHHHHHHH
Confidence 4556778888888888888888888877666332 3333333332 23444555555544332211110 0111111111
Q ss_pred H-HHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHHHHHhhcCC
Q 024929 89 R-QKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLP 167 (260)
Q Consensus 89 k-~kie~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~ 167 (260)
. ..--++-......++.+- |........+..+-..|..|.... ..| -.+.|...|++|+.+ .
T Consensus 383 ~~~~~~~~A~~~~~~a~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~--~~~-----~~~~A~~~~~~a~~~-----~ 445 (514)
T 2gw1_A 383 TDKNDFDKALKQYDLAIELE-----NKLDGIYVGIAPLVGKATLLTRNP--TVE-----NFIEATNLLEKASKL-----D 445 (514)
T ss_dssp HHTTCHHHHHHHHHHHHHHH-----HTSSSCSSCSHHHHHHHHHHHTSC--CTT-----HHHHHHHHHHHHHHH-----C
T ss_pred HHCCCHHHHHHHHHHHHHhh-----hccchHHHHHHHHHHHHHHHhhhh--hcC-----CHHHHHHHHHHHHHh-----C
Confidence 0 000112222333333222 221111111112223344332200 012 145788888888764 3
Q ss_pred CCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024929 168 PTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 204 (260)
Q Consensus 168 pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~ 204 (260)
|.+| ....+.+..+. -.|+.++|+...+++++-
T Consensus 446 ~~~~---~~~~~la~~~~-~~g~~~~A~~~~~~a~~~ 478 (514)
T 2gw1_A 446 PRSE---QAKIGLAQMKL-QQEDIDEAITLFEESADL 478 (514)
T ss_dssp TTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred cccH---HHHHHHHHHHH-HhcCHHHHHHHHHHHHHh
Confidence 4444 33344444444 579999999887777653
No 61
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=77.88 E-value=31 Score=29.23 Aligned_cols=59 Identities=15% Similarity=0.254 Sum_probs=40.2
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 024929 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSS 68 (260)
Q Consensus 8 e~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~Lt~eERnLlsvAyKn~i~~~R~s~R~l~~ 68 (260)
.-+..++.+..+.|+|++.+.++++++..+|.. ..=...+..+|.. .+....|...+..
T Consensus 100 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~l~~~~~~-~g~~~~A~~~~~~ 158 (365)
T 4eqf_A 100 EAWQFLGITQAENENEQAAIVALQRCLELQPNN-LKALMALAVSYTN-TSHQQDACEALKN 158 (365)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCC-HHHHHHHHHHHHc-cccHHHHHHHHHH
Confidence 346678899999999999999999999887654 3444555555543 3444455555543
No 62
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=77.76 E-value=14 Score=25.68 Aligned_cols=53 Identities=9% Similarity=0.056 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024929 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (260)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 203 (260)
+.|...|++|+.+.. ..++.+|.......+.+..++. +|+.++|+...++++.
T Consensus 55 ~~A~~~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~ 107 (131)
T 1elr_A 55 NKCRELCEKAIEVGR-ENREDYRQIAKAYARIGNSYFK-EEKYKDAIHFYNKSLA 107 (131)
T ss_dssp HHHHHHHHHHHHHHH-HSTTCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcc-ccchhHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 578899999998874 3455555545566777776665 7999999887666655
No 63
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=77.67 E-value=25 Score=28.09 Aligned_cols=58 Identities=14% Similarity=0.055 Sum_probs=34.6
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHH
Q 024929 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILS 67 (260)
Q Consensus 8 e~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~Lt~eERnLlsvAyKn~i~~~R~s~R~l~ 67 (260)
+-+..++.+..+.|+|++.+..+.+++..+|.. .+=...+..+|-. .+....+...+.
T Consensus 6 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-~~a~~~lg~~~~~-~g~~~~A~~~~~ 63 (217)
T 2pl2_A 6 QNPLRLGVQLYALGRYDAALTLFERALKENPQD-PEALYWLARTQLK-LGLVNPALENGK 63 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSC-HHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 345667777777888888888888887766653 3334444444432 333444444443
No 64
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=77.37 E-value=29 Score=28.64 Aligned_cols=168 Identities=14% Similarity=0.114 Sum_probs=86.9
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhCchH-HHHHHHHHH
Q 024929 11 VYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEV-NAKRIKEYR 89 (260)
Q Consensus 11 ~~~AklaeqaeRy~Dm~~~mk~~i~~~~~Lt~eERnLlsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~~~-~~~~i~~yk 89 (260)
..+|.+..+.|+|++.+.++++++..+|. +.+-...+..+|-. .+....+...+........ .+.. ......-|.
T Consensus 124 ~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~A~~~~~~~~~~~~--~~~~~~~~la~~~~ 199 (359)
T 3ieg_A 124 RSQALDAFDGADYTAAITFLDKILEVCVW-DAELRELRAECFIK-EGEPRKAISDLKAASKLKS--DNTEAFYKISTLYY 199 (359)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTTCS--CCHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHhCCC-chHHHHHHHHHHHH-CCCHHHHHHHHHHHHHhCC--CCHHHHHHHHHHHH
Confidence 44588999999999999999999987664 34445555555543 3555566666654332211 1111 111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhh--------ccccccccccccchhHHHHHHHHHHHHHHHHHH
Q 024929 90 QKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMK--------GDYYRYLAEFKFGDEKKEAAANSMKAYETATTA 161 (260)
Q Consensus 90 ~kie~EL~~~C~eii~lId~~Lip~~~~~eskvfy~Kmk--------gDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~ 161 (260)
. . .--.+.+..+...+--...+.....+|.++. |..+. ..+ -.+.|...|+++++.
T Consensus 200 ~-----~-~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~-----~~~-----~~~~A~~~~~~~~~~ 263 (359)
T 3ieg_A 200 Q-----L-GDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELI-----RDG-----RYTDATSKYESVMKT 263 (359)
T ss_dssp H-----H-TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHH-----HTT-----CHHHHHHHHHHHHHH
T ss_pred H-----c-CCHHHHHHHHHHHHhhCccchHHHHHHHHHHHHHHHHHHHHHHH-----HcC-----CHHHHHHHHHHHHhc
Confidence 0 0 1112223333332211112223333332221 32221 111 135678888888764
Q ss_pred HhhcCCCCCcchH-HHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024929 162 AEADLPPTHPIRL-GLALNFSVFYYEIMNSPERACHLAKQAFDE 204 (260)
Q Consensus 162 a~~~L~pt~PirL-gLaLN~SVF~yEi~~~~~~A~~iAk~afd~ 204 (260)
. |.+|... .+..+.+..++. .|+.++|+...++++..
T Consensus 264 ~-----~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~~ 301 (359)
T 3ieg_A 264 E-----PSVAEYTVRSKERICHCFSK-DEKPVEAIRICSEVLQM 301 (359)
T ss_dssp C-----CSSHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred C-----CCchHHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHh
Confidence 2 4565443 344555655554 79999999988887663
No 65
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=76.14 E-value=31 Score=28.26 Aligned_cols=56 Identities=14% Similarity=-0.072 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCC-cchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024929 148 AANSMKAYETATTAAEADLPPTH-PIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 204 (260)
Q Consensus 148 ~~~A~~aY~~A~~~a~~~L~pt~-PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~ 204 (260)
.+.|...|++|+.+....-.+.+ |-...+..+.+..++ ..|+.++|+...++++..
T Consensus 209 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~a~~~ 265 (330)
T 3hym_B 209 WKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCR-KLKKYAEALDYHRQALVL 265 (330)
T ss_dssp HHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHhh
Confidence 35789999999998754333222 333344555666554 479999999988887653
No 66
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=75.92 E-value=43 Score=29.83 Aligned_cols=54 Identities=13% Similarity=0.090 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHhh--cCCCCCcc---hHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024929 150 NSMKAYETATTAAEA--DLPPTHPI---RLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (260)
Q Consensus 150 ~A~~aY~~A~~~a~~--~L~pt~Pi---rLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 203 (260)
.+...|.+|....+. .+.|.+|- .++.++..--..|...|+.++|+...++++.
T Consensus 213 ~a~~~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~ 271 (537)
T 3fp2_A 213 VANDLLTKSTDMYHSLLSANTVDDPLRENAALALCYTGIFHFLKNNLLDAQVLLQESIN 271 (537)
T ss_dssp HHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 344455666555432 45566653 2455565555666678999999998888765
No 67
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=74.88 E-value=33 Score=28.02 Aligned_cols=44 Identities=18% Similarity=0.039 Sum_probs=25.0
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHH
Q 024929 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGY 52 (260)
Q Consensus 8 e~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~Lt~eERnLlsvAy 52 (260)
+.++.+|....+.|+|++.+.++++++...|. +..-...+..+|
T Consensus 22 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~ 65 (327)
T 3cv0_A 22 ENPMEEGLSMLKLANLAEAALAFEAVCQAAPE-REEAWRSLGLTQ 65 (327)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHH
Confidence 34566666666667777777777766665544 233333344433
No 68
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=74.51 E-value=9 Score=28.26 Aligned_cols=52 Identities=10% Similarity=0.042 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHH
Q 024929 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAF 202 (260)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~af 202 (260)
+.|...|++|+++.. ..++.++.+-....|.+..+ .-+|+.++|++.-++|+
T Consensus 59 ~~A~~~~~~al~~~~-~~~~~~~~~a~~~~~lg~~~-~~~~~~~~A~~~~~kal 110 (127)
T 4gcn_A 59 AECVQFCEKAVEVGR-ETRADYKLIAKAMSRAGNAF-QKQNDLSLAVQWFHRSL 110 (127)
T ss_dssp HHHHHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCc-ccchhhHHHHHHHHHHHHHH-HHcCCHHHHHHHHHHHH
Confidence 578999999999875 34554544333444555554 45799999998655544
No 69
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=73.47 E-value=7.5 Score=34.54 Aligned_cols=53 Identities=11% Similarity=0.098 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHHhhc-CCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHH
Q 024929 149 ANSMKAYETATTAAEAD-LPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAF 202 (260)
Q Consensus 149 ~~A~~aY~~A~~~a~~~-L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~af 202 (260)
+.|.++|++|+++.+.. ....||-.+...-|.+.-|+. +|+.++|+..-+++.
T Consensus 68 ~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~-~g~~~~A~~~~~ka~ 121 (472)
T 4g1t_A 68 EAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYH-MGRLSDVQIYVDKVK 121 (472)
T ss_dssp HHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHH-cCChHHHHHHHHHHH
Confidence 57999999999998643 345678777777788887776 799999987666554
No 70
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=72.47 E-value=32 Score=26.80 Aligned_cols=59 Identities=5% Similarity=-0.071 Sum_probs=25.4
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHH
Q 024929 9 NFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSI 69 (260)
Q Consensus 9 ~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~Lt~eERnLlsvAyKn~i~~~R~s~R~l~~i 69 (260)
.+..+|...-+.|+|++.+.++++++..+|.- .+-...+..+|- ..+....+...+...
T Consensus 25 ~~~~~a~~~~~~~~~~~A~~~~~~~l~~~~~~-~~~~~~la~~~~-~~~~~~~A~~~~~~~ 83 (243)
T 2q7f_A 25 TGGQQMGRGSEFGDYEKAAEAFTKAIEENKED-AIPYINFANLLS-SVNELERALAFYDKA 83 (243)
T ss_dssp -----------------CCTTHHHHHTTCTTC-HHHHHHHHHHHH-HTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHHhCccc-HHHHHHHHHHHH-HcCCHHHHHHHHHHH
Confidence 45667888888999999999999999866553 444444444443 244555566655543
No 71
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=72.09 E-value=13 Score=28.49 Aligned_cols=74 Identities=9% Similarity=-0.024 Sum_probs=48.7
Q ss_pred hHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHH
Q 024929 120 STVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAK 199 (260)
Q Consensus 120 skvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk 199 (260)
..+..+-..|..|...-. .+.|...|++|+.+++ ..+ .+|...+.+++.-...|--+|++++|+...+
T Consensus 64 ~~~~~~~~l~~~~~~~g~----------~~~A~~~~~~al~~~~-~~~-~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~ 131 (203)
T 3gw4_A 64 AEHRALHQVGMVERMAGN----------WDAARRCFLEERELLA-SLP-EDPLAASANAYEVATVALHFGDLAGARQEYE 131 (203)
T ss_dssp HHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHH-HSC-CCHHHHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHH-HcC-ccHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 344444556666655432 3578999999999986 344 3554555544444444555899999999999
Q ss_pred HHHHHH
Q 024929 200 QAFDEA 205 (260)
Q Consensus 200 ~afd~A 205 (260)
+|+.-+
T Consensus 132 ~al~~~ 137 (203)
T 3gw4_A 132 KSLVYA 137 (203)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888654
No 72
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=71.90 E-value=13 Score=25.41 Aligned_cols=45 Identities=18% Similarity=0.279 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHH
Q 024929 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAF 202 (260)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~af 202 (260)
+.|...|++|+.+ .|.+| ....|.+..++. +|+.++|+...++|+
T Consensus 21 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~g~~~~A~~~~~~al 65 (111)
T 2l6j_A 21 REAVHCYDQLITA-----QPQNP---VGYSNKAMALIK-LGEYTQAIQMCQQGL 65 (111)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHHH-hcCHHHHHHHHHHHH
Confidence 5788899999865 34454 344566666655 799999988766654
No 73
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=71.57 E-value=82 Score=31.12 Aligned_cols=45 Identities=11% Similarity=0.163 Sum_probs=34.2
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHh
Q 024929 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYK 53 (260)
Q Consensus 8 e~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~Lt~eERnLlsvAyK 53 (260)
+-+..++.+..+.|+|++++.+.+++++.+|+.. +=.+.|..+|.
T Consensus 44 ~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~-~a~~nLg~~l~ 88 (723)
T 4gyw_A 44 AAHSNLASVLQQQGKLQEALMHYKEAIRISPTFA-DAYSNMGNTLK 88 (723)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH-HHHHHHHHHHH
Confidence 3456789999999999999999999999888753 33444555544
No 74
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=70.26 E-value=17 Score=23.74 Aligned_cols=46 Identities=17% Similarity=0.320 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024929 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (260)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 203 (260)
+.|...|++|+.+ .|.+| ....+.+..++. .|+.++|+...++++.
T Consensus 26 ~~A~~~~~~a~~~-----~~~~~---~~~~~l~~~~~~-~~~~~~A~~~~~~a~~ 71 (91)
T 1na3_A 26 DEAIEYYQKALEL-----DPNNA---EAWYNLGNAYYK-QGDYDEAIEYYQKALE 71 (91)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHHH-HhhHHHHHHHHHHHHh
Confidence 5688889988865 34443 344566665554 7999999987777665
No 75
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=70.11 E-value=37 Score=26.55 Aligned_cols=56 Identities=13% Similarity=0.083 Sum_probs=35.9
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHH
Q 024929 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRIL 66 (260)
Q Consensus 8 e~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~Lt~eERnLlsvAyKn~i~~~R~s~R~l 66 (260)
+.+..++.+.-+.|+|++.+.++.+++..+ -+..=...+..+|-. .+....|...+
T Consensus 6 ~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~--~~~~~~~~~~~~~~~-~~~~~~A~~~~ 61 (258)
T 3uq3_A 6 DKEKAEGNKFYKARQFDEAIEHYNKAWELH--KDITYLNNRAAAEYE-KGEYETAISTL 61 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--CCTHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHH-cccHHHHHHHH
Confidence 456778888888999999999999988776 334444445544432 23333444444
No 76
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=69.24 E-value=16 Score=26.02 Aligned_cols=47 Identities=15% Similarity=0.281 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024929 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 204 (260)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~ 204 (260)
+.|...|++|+++ .|.+ ..+..|.+..++. +|+.++|+...++++..
T Consensus 44 ~~A~~~~~~al~~-----~p~~---~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~ 90 (117)
T 3k9i_A 44 RKAEAVLANGVKQ-----FPNH---QALRVFYAMVLYN-LGRYEQGVELLLKIIAE 90 (117)
T ss_dssp HHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCc---hHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 5788888888765 3445 3456667766665 69999999988887754
No 77
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=69.09 E-value=24 Score=26.51 Aligned_cols=46 Identities=13% Similarity=0.130 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024929 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (260)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 203 (260)
+.|...|++|+.+ .|.+| ....|.+..|+. +|+.++|+...++++.
T Consensus 62 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 107 (164)
T 3sz7_A 62 EKAAEDAELATVV-----DPKYS---KAWSRLGLARFD-MADYKGAKEAYEKGIE 107 (164)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Confidence 4566666666654 23343 344455555554 6888887776666554
No 78
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=68.28 E-value=46 Score=26.88 Aligned_cols=181 Identities=13% Similarity=0.089 Sum_probs=90.0
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcC-------CCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhh-hh--hCc
Q 024929 9 NFVYVAKLAEQAERYDEMVDAMKNVAKLD-------VELTVEERNLLSVGYKNVIGARRASWRILSSIEQKE-EA--KGN 78 (260)
Q Consensus 9 ~l~~~AklaeqaeRy~Dm~~~mk~~i~~~-------~~Lt~eERnLlsvAyKn~i~~~R~s~R~l~~ieqk~-~~--~~~ 78 (260)
-+..++.+....|+|++.+.++++++... .+....=...+..+|- ..+....|...+....... .. ...
T Consensus 71 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~a~~~~~~~~~~~~ 149 (311)
T 3nf1_A 71 MLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYG-KRGKYKEAEPLCKRALEIREKVLGKDH 149 (311)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHH-HcCcHHHHHHHHHHHHHHHHHhcCCCC
Confidence 35678888889999999999999988642 1112222333333332 2344444555544322211 00 001
Q ss_pred hHHH----HHHHHH-HHHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhccccccccccccchhHHHHHHHHHH
Q 024929 79 EVNA----KRIKEY-RQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMK 153 (260)
Q Consensus 79 ~~~~----~~i~~y-k~kie~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~ 153 (260)
+... ....-| ...=-++-.......+.+.....-+ +....+..+-..|..|...-. .+.|..
T Consensus 150 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~---~~~~~~~~~~~la~~~~~~g~----------~~~A~~ 216 (311)
T 3nf1_A 150 PDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGP---DDPNVAKTKNNLASCYLKQGK----------FKQAET 216 (311)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCT---TCHHHHHHHHHHHHHHHHHTC----------HHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCC---CCHHHHHHHHHHHHHHHHcCC----------HHHHHH
Confidence 1101 000000 0000123334444555554433222 122233333445555533311 356888
Q ss_pred HHHHHHHHHhh-----------------------------------------cCCCCCcchHHHhhhHHHHHHHHhCChH
Q 024929 154 AYETATTAAEA-----------------------------------------DLPPTHPIRLGLALNFSVFYYEIMNSPE 192 (260)
Q Consensus 154 aY~~A~~~a~~-----------------------------------------~L~pt~PirLgLaLN~SVF~yEi~~~~~ 192 (260)
.|++|++++.. .....+|.......+.+..|+. .|+.+
T Consensus 217 ~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~ 295 (311)
T 3nf1_A 217 LYKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYRR-QGKFE 295 (311)
T ss_dssp HHHHHHHHHHHHHHC------CCHHHHHHHHHHC-------CCSCCCC---------CHHHHHHHHHHHHHHHH-HTCHH
T ss_pred HHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHH-CCCHH
Confidence 88888877532 1122456666666666666655 69999
Q ss_pred HHHHHHHHHHHH
Q 024929 193 RACHLAKQAFDE 204 (260)
Q Consensus 193 ~A~~iAk~afd~ 204 (260)
+|+...++|+.-
T Consensus 296 ~A~~~~~~al~l 307 (311)
T 3nf1_A 296 AAETLEEAAMRS 307 (311)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999988887653
No 79
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=67.62 E-value=20 Score=24.02 Aligned_cols=46 Identities=17% Similarity=0.200 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024929 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (260)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 203 (260)
+.|...|++|+.+ .|.++ ....+.+..++. .|+.++|+...++++.
T Consensus 23 ~~A~~~~~~a~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~a~~ 68 (112)
T 2kck_A 23 TESIDLFEKAIQL-----DPEES---KYWLMKGKALYN-LERYEEAVDCYNYVIN 68 (112)
T ss_dssp HHHHHHHHHHHHH-----CCCCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CcCCH---HHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Confidence 5688888888765 23333 345666766665 6999999887776654
No 80
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=67.18 E-value=38 Score=25.51 Aligned_cols=46 Identities=11% Similarity=0.051 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024929 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (260)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 203 (260)
+.|...|++|+.+ .|.+| ....+.+..++. .|+.++|+...++++.
T Consensus 98 ~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~ 143 (177)
T 2e2e_A 98 AQTRAMIDKALAL-----DSNEI---TALMLLASDAFM-QANYAQAIELWQKVMD 143 (177)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-cccHHHHHHHHHHHHh
Confidence 4678888888764 34443 445566666555 6999998887666553
No 81
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=67.12 E-value=25 Score=24.65 Aligned_cols=49 Identities=16% Similarity=0.138 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024929 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (260)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 203 (260)
+.|...|++++.. .|.+|......++.+..++. +|+.++|+..-++++.
T Consensus 56 ~~A~~~~~~~~~~-----~p~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~~~ 104 (129)
T 2xev_A 56 QLAEAQFRDLVSR-----YPTHDKAAGGLLKLGLSQYG-EGKNTEAQQTLQQVAT 104 (129)
T ss_dssp HHHHHHHHHHHHH-----CTTSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCCcccHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 5688888888753 46776655566666666664 7999999887666554
No 82
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=66.04 E-value=32 Score=24.31 Aligned_cols=48 Identities=8% Similarity=0.014 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024929 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEA 205 (260)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~A 205 (260)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.-.
T Consensus 55 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~ 102 (126)
T 3upv_A 55 PEAIADCNKAIEK-----DPNFV---RAYIRKATAQIA-VKEYASALETLDAARTKD 102 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-HhCHHHHHHHHHHHHHhC
Confidence 4577788888754 34443 334455554444 688888888777776654
No 83
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=65.98 E-value=22 Score=28.67 Aligned_cols=54 Identities=15% Similarity=0.188 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHH-----HhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024929 148 AANSMKAYETATTAAEADLPPTHPIRLG-----LALNFSVFYYEIMNSPERACHLAKQAFD 203 (260)
Q Consensus 148 ~~~A~~aY~~A~~~a~~~L~pt~PirLg-----LaLN~SVF~yEi~~~~~~A~~iAk~afd 203 (260)
-+.|..+|++|+++.-. .|+..++.+. +..|-+.-+.. +|+.++|+.-+.+|+.
T Consensus 27 ~eeAi~~Y~kAL~l~p~-~~~~~a~~~~~~~a~a~~n~g~al~~-Lgr~~eAl~~~~kAL~ 85 (159)
T 2hr2_A 27 YDEAAANCRRAMEISHT-MPPEEAFDHAGFDAFCHAGLAEALAG-LRSFDEALHSADKALH 85 (159)
T ss_dssp HHHHHHHHHHHHHHHTT-SCTTSCCCHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCC-CcchhhhhhccchHHHHHHHHHHHHH-CCCHHHHHHHHHHHHH
Confidence 45799999999998743 3333344333 66676666555 7999999988777765
No 84
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=65.79 E-value=46 Score=25.99 Aligned_cols=32 Identities=3% Similarity=0.088 Sum_probs=27.1
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Q 024929 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVE 39 (260)
Q Consensus 8 e~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~ 39 (260)
.-+..++.+..+.|+|++.+.++++++...+.
T Consensus 80 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~ 111 (258)
T 3uq3_A 80 KSFARIGNAYHKLGDLKKTIEYYQKSLTEHRT 111 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHhcCch
Confidence 34567888999999999999999999987665
No 85
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=65.64 E-value=16 Score=26.20 Aligned_cols=49 Identities=20% Similarity=0.182 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024929 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (260)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 203 (260)
+.|...|++|+. +.|.+|....+..+.+..++. +|+.++|+...++++.
T Consensus 45 ~~A~~~~~~a~~-----~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~~~~ 93 (148)
T 2dba_A 45 GGALAAYTQALG-----LDATPQDQAVLHRNRAACHLK-LEDYDKAETEASKAIE 93 (148)
T ss_dssp HHHHHHHHHHHT-----SCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----HcccchHHHHHHHHHHHHHHH-HccHHHHHHHHHHHHh
Confidence 356666666653 345555555566666666554 5788887777766654
No 86
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=65.51 E-value=25 Score=23.75 Aligned_cols=47 Identities=15% Similarity=0.143 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024929 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (260)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 203 (260)
+.|...|++|++. .|.+|.. ...+.+..++. +|+.++|+...++++.
T Consensus 17 ~~A~~~~~~al~~-----~p~~~~~--~~~~lg~~~~~-~~~~~~A~~~~~~al~ 63 (99)
T 2kc7_A 17 ENALQALEEFLQT-----EPVGKDE--AYYLMGNAYRK-LGDWQKALNNYQSAIE 63 (99)
T ss_dssp HHHHHHHHHHHHH-----CSSTHHH--HHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCcHHH--HHHHHHHHHHH-cCCHHHHHHHHHHHHh
Confidence 4677888887754 3445421 45666666665 6999999887766654
No 87
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=63.31 E-value=34 Score=23.67 Aligned_cols=58 Identities=7% Similarity=0.017 Sum_probs=41.1
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHH
Q 024929 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILS 67 (260)
Q Consensus 8 e~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~Lt~eERnLlsvAyKn~i~~~R~s~R~l~ 67 (260)
.-+..++.+..+.|+|++.+.++++++..+|.... =...+..+|.. .+..-.|...+.
T Consensus 8 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~-a~~~lg~~~~~-~g~~~~A~~~~~ 65 (100)
T 3ma5_A 8 FTRYALAQEHLKHDNASRALALFEELVETDPDYVG-TYYHLGKLYER-LDRTDDAIDTYA 65 (100)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTH-HHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH-HHHHHHHHHHH-cCCHHHHHHHHH
Confidence 45678899999999999999999999998887544 44556666543 344444444443
No 88
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=62.98 E-value=68 Score=27.00 Aligned_cols=52 Identities=6% Similarity=-0.038 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHH
Q 024929 148 AANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAF 202 (260)
Q Consensus 148 ~~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~af 202 (260)
-+.|...|++|+.+... .+. +| ..+.++.-.+..|-.+|+.++|+...++++
T Consensus 171 ~~~A~~~~~~al~~~~~-~~~-~~-~~~~~~~~~g~~~~~~g~~~~A~~~~~~al 222 (307)
T 2ifu_A 171 FDEAAASLQKEKSMYKE-MEN-YP-TCYKKCIAQVLVQLHRADYVAAQKCVRESY 222 (307)
T ss_dssp HHHHHHHHHHHHHHHHH-TTC-HH-HHHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHH-cCC-hh-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 35789999999999864 222 22 333333334445556799999988766654
No 89
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=62.83 E-value=56 Score=25.96 Aligned_cols=44 Identities=14% Similarity=0.161 Sum_probs=33.3
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHH
Q 024929 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGY 52 (260)
Q Consensus 8 e~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~Lt~eERnLlsvAy 52 (260)
+-+..++.+..+.|+|++.+.++++++..+|.. .+=...+..+|
T Consensus 40 ~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~-~~a~~~lg~~~ 83 (217)
T 2pl2_A 40 EALYWLARTQLKLGLVNPALENGKTLVARTPRY-LGGYMVLSEAY 83 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc-HHHHHHHHHHH
Confidence 345678899999999999999999999988764 33344444444
No 90
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=62.20 E-value=58 Score=25.91 Aligned_cols=49 Identities=6% Similarity=-0.147 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCC---hHHHHHHHHHHHHHH
Q 024929 148 AANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNS---PERACHLAKQAFDEA 205 (260)
Q Consensus 148 ~~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~---~~~A~~iAk~afd~A 205 (260)
.+.|...|++|+++ .|.+| ...++.+..++ .+++ .++|+...+++++-.
T Consensus 158 ~~~A~~~~~~a~~~-----~p~~~---~~~~~~~~~~~-~~~~~~~~~~A~~~~~~a~~~~ 209 (272)
T 3u4t_A 158 YVKADSSFVKVLEL-----KPNIY---IGYLWRARANA-AQDPDTKQGLAKPYYEKLIEVC 209 (272)
T ss_dssp HHHHHHHHHHHHHH-----STTCH---HHHHHHHHHHH-HHSTTCSSCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----Cccch---HHHHHHHHHHH-HcCcchhhHHHHHHHHHHHHHH
Confidence 35677778877754 34443 22233333333 3466 666776666665543
No 91
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=62.11 E-value=61 Score=26.14 Aligned_cols=64 Identities=13% Similarity=0.032 Sum_probs=45.8
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCC--HHHHHHHHHHHhhhhhhhHHHHHHHHHHhh
Q 024929 7 RENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELT--VEERNLLSVGYKNVIGARRASWRILSSIEQ 71 (260)
Q Consensus 7 re~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~Lt--~eERnLlsvAyKn~i~~~R~s~R~l~~ieq 71 (260)
-+.+..+|...-+.|+|++.+..+++++...|.-. .+=...+..+|-. .+....|...+..+..
T Consensus 15 ~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~~~l~ 80 (261)
T 3qky_A 15 PQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQ-NKEYLLAASEYERFIQ 80 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHH-hCcHHHHHHHHHHHHH
Confidence 46778899999999999999999999998766543 4444555555533 4556667666665443
No 92
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=62.00 E-value=26 Score=24.81 Aligned_cols=46 Identities=20% Similarity=0.146 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024929 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (260)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 203 (260)
+.|...|++|+.+ .|.+| .+..|.+..++. +|+.++|+...++|+.
T Consensus 21 ~~A~~~~~~al~~-----~p~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~al~ 66 (126)
T 3upv_A 21 PNAVKAYTEMIKR-----APEDA---RGYSNRAAALAK-LMSFPEAIADCNKAIE 66 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCh---HHHHHHHHHHHH-hcCHHHHHHHHHHHHH
Confidence 5688889888865 34444 455566666655 7999999998888765
No 93
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=61.59 E-value=26 Score=25.73 Aligned_cols=46 Identities=9% Similarity=0.026 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024929 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (260)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 203 (260)
+.|...|++|+++ .|.+| ....|.+..++. +|+.++|+..-++|+.
T Consensus 64 ~~A~~~~~~al~~-----~p~~~---~a~~~lg~~~~~-~~~~~~A~~~~~~al~ 109 (126)
T 4gco_A 64 QRALDDCDTCIRL-----DSKFI---KGYIRKAACLVA-MREWSKAQRAYEDALQ 109 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----hhhhh---HHHHHHHHHHHH-CCCHHHHHHHHHHHHH
Confidence 5688899999865 44454 344555555554 7999998876665543
No 94
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=60.98 E-value=39 Score=23.53 Aligned_cols=59 Identities=14% Similarity=0.149 Sum_probs=42.1
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 024929 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSS 68 (260)
Q Consensus 8 e~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~Lt~eERnLlsvAyKn~i~~~R~s~R~l~~ 68 (260)
.-+..++.+..+.|+|++.+.++++++..+|.. .+=...+..+|.. .+....+...+..
T Consensus 20 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~la~~~~~-~g~~~~A~~~~~~ 78 (115)
T 2kat_A 20 LLRFTLGKTYAEHEQFDAALPHLRAALDFDPTY-SVAWKWLGKTLQG-QGDRAGARQAWES 78 (115)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-HTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCc-HHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 345678899999999999999999999887764 3445556666654 3555555555543
No 95
>4gfq_A Ribosome-recycling factor; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.65A {Bacillus anthracis}
Probab=60.29 E-value=21 Score=30.43 Aligned_cols=69 Identities=17% Similarity=0.132 Sum_probs=45.4
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhh----hhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 024929 38 VELTVEERNLLSVGYKNVIGARRASWRILSSIEQ----KEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHL 111 (260)
Q Consensus 38 ~~Lt~eERnLlsvAyKn~i~~~R~s~R~l~~ieq----k~~~~~~~~~~~~i~~yk~kie~EL~~~C~eii~lId~~L 111 (260)
|+||.|-|.=|....|...-.-|.+.|-+..--. +.+..+ .+-++-.++.+++|..+.+..+.-||..+
T Consensus 127 P~LTeErRkelvK~ak~~~E~aKvaIRniRrda~~~lKk~~K~~-----~isEDe~k~~e~eiQklTd~~i~~iD~~l 199 (209)
T 4gfq_A 127 PALTEERRRDLVKVVKKYAEEAKVAVRNVRRDGNDDLKKLEKAG-----EITEDDLRGYTEDIQKETDKYIAKVDEIA 199 (209)
T ss_dssp CBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999988888888888753111 100001 11133445666777777777777777654
No 96
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=59.95 E-value=31 Score=23.92 Aligned_cols=46 Identities=17% Similarity=0.106 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024929 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (260)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 203 (260)
+.|...|++|+.+ .|.+| ....+.+..++ -+|+.++|+...++++.
T Consensus 67 ~~A~~~~~~a~~~-----~~~~~---~~~~~la~~~~-~~~~~~~A~~~~~~~~~ 112 (133)
T 2lni_A 67 QLALKDCEECIQL-----EPTFI---KGYTRKAAALE-AMKDYTKAMDVYQKALD 112 (133)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCch---HHHHHHHHHHH-HHhhHHHHHHHHHHHHH
Confidence 5688888888864 33343 34455665555 47999999887777664
No 97
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=59.79 E-value=40 Score=23.30 Aligned_cols=72 Identities=14% Similarity=0.111 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCccchHhHHHHHHHHH
Q 024929 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLR 228 (260)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ld~l~ee~y~ds~~IlqLLr 228 (260)
+.|...|++|+++ .|.+|. ...+.+..|+ -+|+.++|+...++|+.-+-.. ....-...+.++|+
T Consensus 24 ~~A~~~~~~al~~-----~p~~~~---a~~~lg~~~~-~~g~~~~A~~~~~~al~l~~~~------~~~~~~~~l~~~l~ 88 (100)
T 3ma5_A 24 SRALALFEELVET-----DPDYVG---TYYHLGKLYE-RLDRTDDAIDTYAQGIEVAREE------GTQKDLSELQDAKL 88 (100)
T ss_dssp HHHHHHHHHHHHH-----STTCTH---HHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHH------SCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcHH---HHHHHHHHHH-HcCCHHHHHHHHHHHHhhhhcC------CchhHHHHHHHHHH
Confidence 5788888888865 344443 4455555554 4799999999888887665432 12333455566666
Q ss_pred hhHhhhc
Q 024929 229 DNLTLWT 235 (260)
Q Consensus 229 DNl~lW~ 235 (260)
..=..|.
T Consensus 89 ~~~~~~~ 95 (100)
T 3ma5_A 89 KAEGLEH 95 (100)
T ss_dssp HHHTTC-
T ss_pred Hcccccc
Confidence 5555554
No 98
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=59.64 E-value=58 Score=25.11 Aligned_cols=31 Identities=6% Similarity=0.004 Sum_probs=25.5
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Q 024929 9 NFVYVAKLAEQAERYDEMVDAMKNVAKLDVE 39 (260)
Q Consensus 9 ~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~ 39 (260)
.+..++....+.|+|++.+.++++++...+.
T Consensus 40 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~ 70 (198)
T 2fbn_A 40 DIKEEGNEFFKKNEINEAIVKYKEALDFFIH 70 (198)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHhc
Confidence 4567788888899999999999999976443
No 99
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=58.51 E-value=65 Score=25.32 Aligned_cols=61 Identities=7% Similarity=-0.076 Sum_probs=42.1
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHh
Q 024929 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIE 70 (260)
Q Consensus 8 e~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~Lt~eERnLlsvAyKn~i~~~R~s~R~l~~ie 70 (260)
.-+..+|.+..+.|+|++.+.++++++..++.- ..-...+..+|-. .+....+.+.+....
T Consensus 72 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~-~~~~~~la~~~~~-~g~~~~A~~~~~~~~ 132 (252)
T 2ho1_A 72 DAHAALAVVFQTEMEPKLADEEYRKALASDSRN-ARVLNNYGGFLYE-QKRYEEAYQRLLEAS 132 (252)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCc-HHHHHHHHHHHHH-HhHHHHHHHHHHHHH
Confidence 345678889999999999999999999877653 3444445555433 455566666665543
No 100
>1lyp_A CAP18; lipopolysaccharide-binding protein; NMR {Oryctolagus cuniculus} SCOP: j.17.1.1
Probab=57.53 E-value=22 Score=20.65 Aligned_cols=26 Identities=27% Similarity=0.611 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 024929 83 KRIKEYRQKVESELSDICNDIMTVID 108 (260)
Q Consensus 83 ~~i~~yk~kie~EL~~~C~eii~lId 108 (260)
+.++.||.+|.+.|..+.+.|-.++-
T Consensus 4 krlrkfrnkikeklkkigqkiqgllp 29 (32)
T 1lyp_A 4 KRLRKFRNKIKEKLKKIGQKIQGLLP 29 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 45788999999999999998877663
No 101
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=57.35 E-value=31 Score=26.09 Aligned_cols=46 Identities=20% Similarity=0.315 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024929 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (260)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 203 (260)
+.|..+|++|+++ .|.|| ....+.+..|+. +|+.++|+...+++..
T Consensus 22 ~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~~~~~~a~~~~~~~~~ 67 (184)
T 3vtx_A 22 DGAIRAYKKVLKA-----DPNNV---ETLLKLGKTYMD-IGLPNDAIESLKKFVV 67 (184)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-CCCHHHHHHHHHHHHh
Confidence 5788899998864 35554 233444444443 6888888887777643
No 102
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=56.63 E-value=41 Score=23.04 Aligned_cols=49 Identities=20% Similarity=0.345 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 024929 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAI 206 (260)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai 206 (260)
+.|...|++|+.. .|.+| .+..+.+..++. .|+.++|+...++++...-
T Consensus 21 ~~A~~~~~~a~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~~~~ 69 (131)
T 1elr_A 21 DTALKHYDKAKEL-----DPTNM---TYITNQAAVYFE-KGDYNKCRELCEKAIEVGR 69 (131)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCccH---HHHHHHHHHHHH-hccHHHHHHHHHHHHhhcc
Confidence 5688888888765 23343 344566666555 6999999999888877653
No 103
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=56.15 E-value=32 Score=28.87 Aligned_cols=53 Identities=8% Similarity=-0.051 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024929 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 204 (260)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~ 204 (260)
+.|..+|++|+++... +. +|...+.+++-.-..|.-+|++++|+...++|+.-
T Consensus 54 ~~A~~~~~~al~~~~~-~~--~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l 106 (292)
T 1qqe_A 54 NLAGDSFLKAADYQKK-AG--NEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQI 106 (292)
T ss_dssp HHHHHHHHHHHHHHHH-TT--CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-hC--CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 5799999999999753 32 55555666666566666789999999988887654
No 104
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=56.01 E-value=46 Score=23.14 Aligned_cols=49 Identities=10% Similarity=-0.064 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 024929 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAI 206 (260)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai 206 (260)
+.|...|++|+.+ .|.+| ....+.+..+.. +|+.++|+...++++.-.-
T Consensus 36 ~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~ 84 (115)
T 2kat_A 36 DAALPHLRAALDF-----DPTYS---VAWKWLGKTLQG-QGDRAGARQAWESGLAAAQ 84 (115)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCcH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHHhcc
Confidence 5688889998864 34443 234555555554 7999999998887776543
No 105
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=55.51 E-value=75 Score=25.11 Aligned_cols=47 Identities=15% Similarity=0.082 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024929 148 AANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (260)
Q Consensus 148 ~~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 203 (260)
.+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.
T Consensus 93 ~~~A~~~~~~al~~-----~~~~~---~~~~~la~~~~~-~g~~~~A~~~~~~a~~ 139 (275)
T 1xnf_A 93 FDAAYEAFDSVLEL-----DPTYN---YAHLNRGIALYY-GGRDKLAQDDLLAFYQ 139 (275)
T ss_dssp HHHHHHHHHHHHHH-----CTTCT---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-----Ccccc---HHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 35677888888764 34443 233444444444 7999999888888765
No 106
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=55.12 E-value=76 Score=25.07 Aligned_cols=49 Identities=14% Similarity=0.150 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024929 150 NSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (260)
Q Consensus 150 ~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 203 (260)
.|...|++++..... ..|....+.++.+..++. +|+.++|+...++++.
T Consensus 195 ~a~~~~~~~~~~~~~----~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~ 243 (275)
T 1xnf_A 195 TLMERLKADATDNTS----LAEHLSETNFYLGKYYLS-LGDLDSATALFKLAVA 243 (275)
T ss_dssp HHHHHHHHHCCSHHH----HHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhccccc----ccccccHHHHHHHHHHHH-cCCHHHHHHHHHHHHh
Confidence 455555555433221 122223445555555554 6999999887776653
No 107
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=55.09 E-value=83 Score=25.48 Aligned_cols=33 Identities=15% Similarity=0.122 Sum_probs=27.3
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCC
Q 024929 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVEL 40 (260)
Q Consensus 8 e~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~L 40 (260)
.-+..++.+..+.|+|++.+.++++++..+|..
T Consensus 56 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~ 88 (327)
T 3cv0_A 56 EAWRSLGLTQAENEKDGLAIIALNHARMLDPKD 88 (327)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCC
Confidence 345678888999999999999999999876653
No 108
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=55.06 E-value=59 Score=23.73 Aligned_cols=48 Identities=10% Similarity=0.061 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024929 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEA 205 (260)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~A 205 (260)
+.|..+|++|+.+ .|.+|. ..+|.+..++. +|+.++|+...++++.-.
T Consensus 69 ~~A~~~~~~al~~-----~p~~~~---~~~~lg~~~~~-~g~~~~A~~~~~~al~~~ 116 (142)
T 2xcb_A 69 EQALQSYSYGALM-----DINEPR---FPFHAAECHLQ-LGDLDGAESGFYSARALA 116 (142)
T ss_dssp HHHHHHHHHHHHH-----CTTCTH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCcH---HHHHHHHHHHH-cCCHHHHHHHHHHHHHhC
Confidence 5689999999864 456663 34556665554 799999998777776544
No 109
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=54.75 E-value=16 Score=26.10 Aligned_cols=31 Identities=13% Similarity=0.085 Sum_probs=23.0
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Q 024929 9 NFVYVAKLAEQAERYDEMVDAMKNVAKLDVE 39 (260)
Q Consensus 9 ~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~ 39 (260)
-+++++.++.+.|+|++.+.+..++.+.+|+
T Consensus 45 A~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~ 75 (93)
T 3bee_A 45 ALSLIANDHFISFRFQEAIDTWVLLLDSNDP 75 (93)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTCCCT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Confidence 4567777777778888888777777776666
No 110
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=54.38 E-value=38 Score=22.70 Aligned_cols=45 Identities=9% Similarity=-0.052 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHH
Q 024929 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAF 202 (260)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~af 202 (260)
+.|...|++|+.+ .|.+| ....+.+..++ -+|+.++|+...++++
T Consensus 55 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~-~~~~~~~A~~~~~~~~ 99 (118)
T 1elw_A 55 QKAYEDGCKTVDL-----KPDWG---KGYSRKAAALE-FLNRFEEAKRTYEEGL 99 (118)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHH-HHhhHHHHHHHHHHHH
Confidence 5678888888764 34443 34456665554 4799999988766654
No 111
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=54.27 E-value=34 Score=25.74 Aligned_cols=46 Identities=9% Similarity=-0.011 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024929 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (260)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 203 (260)
+.|..+|++|+.+ .|.+|. ..+|.++.|+. +|+.++|+...++|+.
T Consensus 72 ~~A~~~~~~al~l-----~p~~~~---~~~~lg~~~~~-~g~~~~A~~~~~~al~ 117 (148)
T 2vgx_A 72 DLAIHSYSYGAVM-----DIXEPR---FPFHAAECLLQ-XGELAEAESGLFLAQE 117 (148)
T ss_dssp HHHHHHHHHHHHH-----STTCTH---HHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCch---HHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 5789999999865 456653 34666666665 7999999876666544
No 112
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=54.00 E-value=65 Score=23.91 Aligned_cols=70 Identities=6% Similarity=-0.088 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCccchHhHHHHHHHHH
Q 024929 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLR 228 (260)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ld~l~ee~y~ds~~IlqLLr 228 (260)
+.|...|++|+.+ .|.+| ...++.+..|+. +|+.++|+...++|+.- +.+.-......+..++
T Consensus 80 ~~A~~~~~~al~~-----~p~~~---~a~~~~g~~~~~-~g~~~~A~~~~~~al~l--------~p~~~~~~~~~l~~~~ 142 (162)
T 3rkv_A 80 HEAEETSSEVLKR-----EETNE---KALFRRAKARIA-AWKLDEAEEDLKLLLRN--------HPAAASVVAREMKIVT 142 (162)
T ss_dssp HHHHHHHHHHHHH-----STTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH--------CGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCcch---HHHHHHHHHHHH-HhcHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHH
Confidence 4678888888765 45554 344455555554 79999998766665432 2222223444555555
Q ss_pred hhHhhhc
Q 024929 229 DNLTLWT 235 (260)
Q Consensus 229 DNl~lW~ 235 (260)
.-+..+.
T Consensus 143 ~~~~~~~ 149 (162)
T 3rkv_A 143 ERRAEKK 149 (162)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 5554443
No 113
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=53.98 E-value=46 Score=22.65 Aligned_cols=16 Identities=13% Similarity=0.065 Sum_probs=9.1
Q ss_pred hCChHHHHHHHHHHHH
Q 024929 188 MNSPERACHLAKQAFD 203 (260)
Q Consensus 188 ~~~~~~A~~iAk~afd 203 (260)
.|+.++|+....+++.
T Consensus 59 ~~~~~~A~~~~~~~~~ 74 (131)
T 2vyi_A 59 LGNYAGAVQDCERAIC 74 (131)
T ss_dssp TTCHHHHHHHHHHHHH
T ss_pred hhchHHHHHHHHHHHh
Confidence 4666666665555543
No 114
>1dd5_A Ribosome recycling factor; three-helix bundle, beta-alpha-beta sandwich; 2.55A {Thermotoga maritima} SCOP: d.67.3.1 PDB: 1t1m_C
Probab=53.85 E-value=33 Score=28.58 Aligned_cols=73 Identities=15% Similarity=0.214 Sum_probs=45.0
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 024929 38 VELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHL 111 (260)
Q Consensus 38 ~~Lt~eERnLlsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i~~yk~kie~EL~~~C~eii~lId~~L 111 (260)
|+||.|-|.=|....|...-..|.+.|.+..--...- +.......+-++-.++.++++..+.+..+.-||..+
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~l-Kk~~K~~~iseD~~k~~e~~iQkltd~~i~~id~~~ 175 (185)
T 1dd5_A 103 PSPTTEQREKWVKKAKEIVEEGKIAIRNIRREILKKI-KEDQKEGLIPEDDAKRLENEIQKLTDEFIEKLDEVF 175 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999988888888888743111000 000000011234445666777777777777776654
No 115
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=53.76 E-value=1.2e+02 Score=27.04 Aligned_cols=59 Identities=12% Similarity=0.196 Sum_probs=39.6
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhh-hHHHHHHHH
Q 024929 7 RENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGA-RRASWRILS 67 (260)
Q Consensus 7 re~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~Lt~eERnLlsvAyKn~i~~-~R~s~R~l~ 67 (260)
.+-+.+++.+..+.|+|++.+....+++..+|... +=.+.+..+|... +. ...+...+.
T Consensus 97 ~~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~~~-~a~~~~g~~l~~~-g~d~~eAl~~~~ 156 (382)
T 2h6f_A 97 RDVYDYFRAVLQRDERSERAFKLTRDAIELNAANY-TVWHFRRVLLKSL-QKDLHEEMNYIT 156 (382)
T ss_dssp HHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTTCH-HHHHHHHHHHHHT-TCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCChHHHHHHHHHHHHhCccCH-HHHHHHHHHHHHc-ccCHHHHHHHHH
Confidence 34566788888889999999999999999887743 3344444444432 32 445555544
No 116
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=53.35 E-value=48 Score=22.56 Aligned_cols=47 Identities=17% Similarity=0.126 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024929 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 204 (260)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~ 204 (260)
+.|...|++|+.+ .|.+| ....+.+..++ -+|+.++|+...++++..
T Consensus 63 ~~A~~~~~~~~~~-----~~~~~---~~~~~~~~~~~-~~~~~~~A~~~~~~~~~~ 109 (131)
T 2vyi_A 63 AGAVQDCERAICI-----DPAYS---KAYGRMGLALS-SLNKHVEAVAYYKKALEL 109 (131)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CccCH---HHHHHHHHHHH-HhCCHHHHHHHHHHHHhc
Confidence 5688888888764 34443 23445555544 479999999877776643
No 117
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=53.14 E-value=1.1e+02 Score=26.11 Aligned_cols=32 Identities=6% Similarity=0.310 Sum_probs=21.9
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCC
Q 024929 9 NFVYVAKLAEQAERYDEMVDAMKNVAKLDVEL 40 (260)
Q Consensus 9 ~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~L 40 (260)
-+..++.+..+.|+|++.+.++++++..+|..
T Consensus 69 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 100 (388)
T 1w3b_A 69 AYSNLGNVYKERGQLQEAIEHYRHALRLKPDF 100 (388)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHcCcch
Confidence 35566777777777777777777777666554
No 118
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=52.22 E-value=37 Score=25.49 Aligned_cols=32 Identities=22% Similarity=0.168 Sum_probs=28.0
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCC
Q 024929 9 NFVYVAKLAEQAERYDEMVDAMKNVAKLDVEL 40 (260)
Q Consensus 9 ~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~L 40 (260)
-...+|++..+.|+|+..+.+++++++.+|.-
T Consensus 33 ~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~ 64 (150)
T 4ga2_A 33 KGFYFAKLYYEAKEYDLAKKYICTYINVQERD 64 (150)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 34678999999999999999999999987764
No 119
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=52.04 E-value=46 Score=24.14 Aligned_cols=47 Identities=4% Similarity=-0.178 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024929 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 204 (260)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~ 204 (260)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++..
T Consensus 64 ~~A~~~~~~a~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~a~~~ 110 (166)
T 1a17_A 64 GYALGDATRAIEL-----DKKYI---KGYYRRAASNMA-LGKFRAALRDYETVVKV 110 (166)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHHH-hccHHHHHHHHHHHHHh
Confidence 5688888888865 24443 344555555554 79999999888777653
No 120
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=51.95 E-value=50 Score=22.03 Aligned_cols=47 Identities=19% Similarity=0.199 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024929 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 204 (260)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~ 204 (260)
+.|...|++|+.. .|.+| ....+.+..++. .|+.++|+...++++..
T Consensus 21 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~ 67 (118)
T 1elw_A 21 DDALQCYSEAIKL-----DPHNH---VLYSNRSAAYAK-KGDYQKAYEDGCKTVDL 67 (118)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCcH---HHHHHHHHHHHh-hccHHHHHHHHHHHHHh
Confidence 5678888888754 34443 244555555554 79999999988887654
No 121
>1ise_A Ribosome recycling factor; translation; 2.20A {Escherichia coli} SCOP: d.67.3.1 PDB: 1ek8_A* 1zn0_A 1zn1_A 2rdo_8
Probab=51.79 E-value=35 Score=28.43 Aligned_cols=69 Identities=13% Similarity=0.121 Sum_probs=44.5
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhh----hhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 024929 38 VELTVEERNLLSVGYKNVIGARRASWRILSSIEQ----KEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHL 111 (260)
Q Consensus 38 ~~Lt~eERnLlsvAyKn~i~~~R~s~R~l~~ieq----k~~~~~~~~~~~~i~~yk~kie~EL~~~C~eii~lId~~L 111 (260)
|+||.|-|.=|....|...-..|.+.|.+..--. +.+..+ .+-++-.++.++++..+.+..+.-||..+
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K~~-----~iseD~~k~~e~~iQkltd~~i~~id~~~ 175 (185)
T 1ise_A 103 PPLTEERRKDLTKIVRGEAEQARVAVRNVGRDANDKVKALLKDK-----EISEDDDRRSQDDVQKLTDAAIKKIEAAL 175 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-----SSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999988888888888743110 100000 01234445566677777777666666554
No 122
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=51.70 E-value=71 Score=23.71 Aligned_cols=31 Identities=10% Similarity=0.156 Sum_probs=17.8
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Q 024929 9 NFVYVAKLAEQAERYDEMVDAMKNVAKLDVE 39 (260)
Q Consensus 9 ~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~ 39 (260)
.+..++.+..+.|+|++.+.++.+++..+|.
T Consensus 13 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~ 43 (164)
T 3sz7_A 13 KLKSEGNAAMARKEYSKAIDLYTQALSIAPA 43 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc
Confidence 3445555555666666666666666655443
No 123
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=51.69 E-value=66 Score=23.34 Aligned_cols=58 Identities=21% Similarity=0.185 Sum_probs=35.7
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 024929 9 NFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSS 68 (260)
Q Consensus 9 ~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~Lt~eERnLlsvAyKn~i~~~R~s~R~l~~ 68 (260)
-+..++.+..+.|+|++.+..+++++...|.- ..-...+..+|- ..+....+...+..
T Consensus 10 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~A~~~~~~ 67 (186)
T 3as5_A 10 YYRDKGISHAKAGRYSQAVMLLEQVYDADAFD-VDVALHLGIAYV-KTGAVDRGTELLER 67 (186)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHTTTCCTTSCC-HHHHHHHHHHHH-HTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCccC-hHHHHHHHHHHH-HcCCHHHHHHHHHH
Confidence 34567888888999999999999988765543 333333444332 23444445554443
No 124
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=51.58 E-value=14 Score=33.13 Aligned_cols=54 Identities=19% Similarity=0.238 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHhhc--------CCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024929 149 ANSMKAYETATTAAEAD--------LPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (260)
Q Consensus 149 ~~A~~aY~~A~~~a~~~--------L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 203 (260)
+.|...|++|+.+.... ....+|....+.+|.+..|+. +|+.++|+..+++|+.
T Consensus 240 ~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 301 (370)
T 1ihg_A 240 EMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLK-MSDWQGAVDSCLEALE 301 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHh-ccCHHHHHHHHHHHHH
Confidence 56788888888765421 011467777788888887775 6889988888887754
No 125
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=50.98 E-value=50 Score=23.34 Aligned_cols=46 Identities=7% Similarity=-0.076 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024929 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (260)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 203 (260)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.
T Consensus 82 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~al~ 127 (148)
T 2dba_A 82 DKAETEASKAIEK-----DGGDV---KALYRRSQALEK-LGRLDQAVLDLQRCVS 127 (148)
T ss_dssp HHHHHHHHHHHHH-----TSCCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh-----CccCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 5688888888765 34443 344555655554 7999999887766654
No 126
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=50.65 E-value=47 Score=24.87 Aligned_cols=46 Identities=11% Similarity=0.135 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024929 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (260)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 203 (260)
+.|...|++|+++ .|.||- ...+.+..|+ -+|+.++|+..-++|+.
T Consensus 48 ~~A~~~~~~al~~-----~p~~~~---a~~~lg~~~~-~~~~~~~A~~~~~~al~ 93 (150)
T 4ga2_A 48 DLAKKYICTYINV-----QERDPK---AHRFLGLLYE-LEENTDKAVECYRRSVE 93 (150)
T ss_dssp HHHHHHHHHHHHH-----CTTCHH---HHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCHH---HHHHHHHHHH-HcCchHHHHHHHHHHHH
Confidence 5788888888765 455542 3344444444 47999998887666654
No 127
>1eh1_A Ribosome recycling factor; translation, hinge variability; 2.60A {Thermus thermophilus} SCOP: d.67.3.1 PDB: 2qbe_6 2qbg_6 2qbi_6* 2qbk_6* 2v46_Y* 2v48_Y* 2z4l_6* 2z4n_6* 3j0d_J 3j0e_G
Probab=50.39 E-value=35 Score=28.44 Aligned_cols=73 Identities=16% Similarity=0.162 Sum_probs=45.7
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 024929 38 VELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHL 111 (260)
Q Consensus 38 ~~Lt~eERnLlsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i~~yk~kie~EL~~~C~eii~lId~~L 111 (260)
|+||.|-|.=|....|...-..|.+.|.+..--...- +.......+-++-.++.++++..+.+..+.-||..+
T Consensus 104 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~l-Kk~~K~~~iseD~~k~~e~~iQkltd~~i~~id~~~ 176 (185)
T 1eh1_A 104 PPLTEERRKDLVRAVRQYAEEGRVAIRNIRREALDKL-KKLAKELHLSEDETKRAEAEIQKITDEFIAKADQLA 176 (185)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999988888888888743111000 000000011234455666777777777777777654
No 128
>1is1_A Ribosome recycling factor; translation; 2.20A {Vibrio parahaemolyticus} SCOP: d.67.3.1 PDB: 3r8n_Y
Probab=50.16 E-value=36 Score=28.30 Aligned_cols=69 Identities=19% Similarity=0.132 Sum_probs=44.5
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhh----hhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 024929 38 VELTVEERNLLSVGYKNVIGARRASWRILSSIEQ----KEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHL 111 (260)
Q Consensus 38 ~~Lt~eERnLlsvAyKn~i~~~R~s~R~l~~ieq----k~~~~~~~~~~~~i~~yk~kie~EL~~~C~eii~lId~~L 111 (260)
|+||.|-|.=|....|...-..|.+.|.+..--. +.+..+ .+-++-.++.++++..+.+..+.-||..+
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K~~-----~iseD~~k~~e~~iQkltd~~i~~id~~~ 175 (185)
T 1is1_A 103 PPLTEERRKDLVKIVRGEAEGGRVAVRNIRRDANNDLKALLKDK-----EISEDEDRKAQEEIQKLTDVAVKKIDEVL 175 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999988888888888743110 100001 01234445566677777777776666554
No 129
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=49.59 E-value=40 Score=25.97 Aligned_cols=47 Identities=9% Similarity=0.044 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024929 148 AANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (260)
Q Consensus 148 ~~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 203 (260)
-+.|..+|++|+.+ .|.+|. ...|.++.|.. +|++++|+..-++|+.
T Consensus 86 ~~~Ai~~~~~al~l-----~P~~~~---~~~~lg~~~~~-lg~~~eA~~~~~~al~ 132 (151)
T 3gyz_A 86 FQQAADLYAVAFAL-----GKNDYT---PVFHTGQCQLR-LKAPLKAKECFELVIQ 132 (151)
T ss_dssp HHHHHHHHHHHHHH-----SSSCCH---HHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhh-----CCCCcH---HHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 35789999999865 456663 34566666554 7999999876555544
No 130
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=49.51 E-value=1.4e+02 Score=26.58 Aligned_cols=44 Identities=14% Similarity=0.070 Sum_probs=25.9
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhh
Q 024929 10 FVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKN 54 (260)
Q Consensus 10 l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~Lt~eERnLlsvAyKn 54 (260)
+..++.+..+.|+|++.+.++.+++..+|. +..=.+-+..+|..
T Consensus 203 ~~~lg~~~~~~g~~~eAl~~~~~al~l~P~-~~~a~~~lg~~l~~ 246 (382)
T 2h6f_A 203 WQHRQWVIQEFKLWDNELQYVDQLLKEDVR-NNSVWNQRYFVISN 246 (382)
T ss_dssp HHHHHHHHHHHTCCTTHHHHHHHHHHHCTT-CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHH
Confidence 345666666677777777777777766555 23334444444444
No 131
>1wqg_A Ribosome recycling factor; translation factor, triple-helix bundle, protein synthesis, translation; 2.15A {Mycobacterium tuberculosis} SCOP: d.67.3.1 PDB: 1wqf_A 1wqh_A
Probab=48.95 E-value=39 Score=28.11 Aligned_cols=69 Identities=22% Similarity=0.198 Sum_probs=43.9
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhh----hhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 024929 38 VELTVEERNLLSVGYKNVIGARRASWRILSSIEQ----KEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHL 111 (260)
Q Consensus 38 ~~Lt~eERnLlsvAyKn~i~~~R~s~R~l~~ieq----k~~~~~~~~~~~~i~~yk~kie~EL~~~C~eii~lId~~L 111 (260)
|+||.|-|.=|....|...-..|.+.|.+..--. +.+..+ .+-++-.++.++++..+.+..+.-||..+
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K~~-----~iseD~~k~~e~~iQkltd~~i~~id~~~ 175 (185)
T 1wqg_A 103 PQLTEERRRELVKQAKHKGEEAKVSVRNIRRKAMEELHRIRKEG-----EAGEDEVGRAEKDLDKTTHQYVTQIDELV 175 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999888888888888743110 110000 01134445566666666666666666544
No 132
>1ge9_A Ribosome recycling factor; three-helix bundle; NMR {Aquifex aeolicus} SCOP: d.67.3.1
Probab=48.92 E-value=68 Score=26.58 Aligned_cols=70 Identities=13% Similarity=0.119 Sum_probs=46.4
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 024929 38 VELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHL 111 (260)
Q Consensus 38 ~~Lt~eERnLlsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i~~yk~kie~EL~~~C~eii~lId~~L 111 (260)
|+||.|-|.=|....|...-..|.+.|.+..--...-.+.. .+-++-.++.++++..+.+..+.-||..+
T Consensus 105 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~----kiseD~~k~~e~~iQkltd~~i~~id~~~ 174 (184)
T 1ge9_A 105 PPLTEERRRELVRLLHKITEEARVRVRNVRREAKEMIEELE----GISEDEKKRALERLQKLTDKYIDEINKLM 174 (184)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHST----TCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999888888888887431111100100 02244555667777777777777777654
No 133
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=48.73 E-value=32 Score=27.66 Aligned_cols=72 Identities=13% Similarity=0.117 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHHh--hcCCCCCc-------chHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCccchHh
Q 024929 149 ANSMKAYETATTAAE--ADLPPTHP-------IRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKD 219 (260)
Q Consensus 149 ~~A~~aY~~A~~~a~--~~L~pt~P-------irLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ld~l~ee~y~d 219 (260)
+.|..+|.+|+++-. -.+.|.++ .|+|.+|. -+|+.++|+.--++|+.-. .-+-..+++
T Consensus 74 ~eAl~~~~kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~-------~lgr~eEAl~~y~kAlel~-----p~d~~~~~~ 141 (159)
T 2hr2_A 74 DEALHSADKALHYFNRRGELNQDEGKLWISAVYSRALALD-------GLGRGAEAMPEFKKVVEMI-----EERKGETPG 141 (159)
T ss_dssp HHHHHHHHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHH-------HTTCHHHHHHHHHHHHHHH-----HHCCSCCTT
T ss_pred HHHHHHHHHHHHhhhccccCCCchHHHHHHHHHhHHHHHH-------HCCCHHHHHHHHHHHHhcC-----CCcHHHHHH
Confidence 468888999988732 24566554 34444444 4899999987555544332 223334666
Q ss_pred HHHHHHHHHhhHh
Q 024929 220 STLIMQLLRDNLT 232 (260)
Q Consensus 220 s~~IlqLLrDNl~ 232 (260)
...+.+.+.+.+.
T Consensus 142 ~~~~~~~~~~~~~ 154 (159)
T 2hr2_A 142 KERMMEVAIDRIA 154 (159)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 6666666655443
No 134
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=48.02 E-value=56 Score=23.60 Aligned_cols=47 Identities=23% Similarity=0.161 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024929 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 204 (260)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~ 204 (260)
+.|...|++|+.+. |.+ ..+..+.+..++. .|+.++|+...++++..
T Consensus 30 ~~A~~~~~~al~~~-----~~~---~~~~~~~a~~~~~-~~~~~~A~~~~~~a~~~ 76 (166)
T 1a17_A 30 ENAIKFYSQAIELN-----PSN---AIYYGNRSLAYLR-TECYGYALGDATRAIEL 76 (166)
T ss_dssp HHHHHHHHHHHHHS-----TTC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC-----CCC---hHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 56888888888652 333 3445555555554 79999999988887653
No 135
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=47.68 E-value=61 Score=21.76 Aligned_cols=46 Identities=17% Similarity=0.320 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024929 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (260)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 203 (260)
+.|...|++|+.. .|.+| ....+.+..++. .|+.++|+...++++.
T Consensus 26 ~~A~~~~~~~~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~ 71 (125)
T 1na0_A 26 DEAIEYYQKALEL-----DPNNA---EAWYNLGNAYYK-QGDYDEAIEYYQKALE 71 (125)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CcCcH---HHHHHHHHHHHH-hCCHHHHHHHHHHHHH
Confidence 4566667666643 22232 223344444443 5777777776666554
No 136
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=45.82 E-value=58 Score=25.00 Aligned_cols=46 Identities=15% Similarity=0.164 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024929 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (260)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 203 (260)
+.|...|++|+.+ .|.+| ....|.+..++. +|+.++|+...++++.
T Consensus 54 ~~A~~~~~~al~~-----~~~~~---~~~~~lg~~~~~-~~~~~~A~~~~~~al~ 99 (213)
T 1hh8_A 54 TEAEKAFTRSINR-----DKHLA---VAYFQRGMLYYQ-TEKYDLAIKDLKEALI 99 (213)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----Cccch---HHHHHHHHHHHH-cccHHHHHHHHHHHHH
Confidence 5788899998865 23443 445666666665 7999999998888877
No 137
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=45.38 E-value=67 Score=21.55 Aligned_cols=46 Identities=17% Similarity=0.320 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024929 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (260)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 203 (260)
+.|...|++++.+ .|.+| ....+.+..++. .|+.++|+...++++.
T Consensus 60 ~~A~~~~~~~~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~ 105 (125)
T 1na0_A 60 DEAIEYYQKALEL-----DPNNA---EAWYNLGNAYYK-QGDYDEAIEYYQKALE 105 (125)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCccH---HHHHHHHHHHHH-hcCHHHHHHHHHHHHH
Confidence 4678888888754 33443 334556666654 6999999887776654
No 138
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=45.38 E-value=33 Score=31.32 Aligned_cols=53 Identities=15% Similarity=0.207 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHhhcCCC--------CCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024929 149 ANSMKAYETATTAAEADLPP--------THPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (260)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~p--------t~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 203 (260)
+.|...|++|+.+... .+. .+|.+..+.+|.+..|+. +++.++|+...++|+.
T Consensus 285 ~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 345 (457)
T 1kt0_A 285 MQAVIQYGKIVSWLEM-EYGLSEKESKASESFLLAAFLNLAMCYLK-LREYTKAVECCDKALG 345 (457)
T ss_dssp HHHHHHHHHHHHHHTT-CCSCCHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcc-cccCChHHHHHHHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHh
Confidence 5688888888876531 110 134667788888888776 6899998888877643
No 139
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=45.13 E-value=19 Score=31.43 Aligned_cols=54 Identities=15% Similarity=0.248 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHhhcC-------CCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024929 149 ANSMKAYETATTAAEADL-------PPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (260)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L-------~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 203 (260)
+.|...|++|+.+....- ...+|.+..+.+|.+..|+. +|+.++|+...++|+.
T Consensus 164 ~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 224 (336)
T 1p5q_A 164 KQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLK-LQAFSAAIESCNKALE 224 (336)
T ss_dssp HHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
No 140
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=44.86 E-value=58 Score=25.65 Aligned_cols=32 Identities=13% Similarity=0.206 Sum_probs=27.2
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHHhcCC
Q 024929 7 RENFVYVAKLAEQAERYDEMVDAMKNVAKLDV 38 (260)
Q Consensus 7 re~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~ 38 (260)
-+.++..+...-+.|+|++.+.++.+++..+|
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p 35 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALNI 35 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCC
Confidence 35678888888899999999999999987654
No 141
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=44.60 E-value=63 Score=27.22 Aligned_cols=53 Identities=11% Similarity=0.030 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcch-HHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024929 148 AANSMKAYETATTAAEADLPPTHPIR-LGLALNFSVFYYEIMNSPERACHLAKQAFDE 204 (260)
Q Consensus 148 ~~~A~~aY~~A~~~a~~~L~pt~Pir-LgLaLN~SVF~yEi~~~~~~A~~iAk~afd~ 204 (260)
.+.|...|++|+++... . .+|.. .....|.+.+|.. +|+.++|+...++|+.-
T Consensus 131 ~~~A~~~~~~Al~~~~~-~--~~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~ 184 (307)
T 2ifu_A 131 LSKAVHLYQQAAAVFEN-E--ERLRQAAELIGKASRLLVR-QQKFDEAAASLQKEKSM 184 (307)
T ss_dssp HHHHHHHHHHHHHHHHH-T--TCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh-C--CChhHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHH
Confidence 36799999999999864 2 23333 3345566666665 79999999888877664
No 142
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=44.39 E-value=1.5e+02 Score=25.19 Aligned_cols=44 Identities=18% Similarity=0.129 Sum_probs=31.9
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHH
Q 024929 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGY 52 (260)
Q Consensus 8 e~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~Lt~eERnLlsvAy 52 (260)
.-+..++.+.-+.+++++.+.+.+.++..+|.. .+-...+..+|
T Consensus 34 ~~~~~l~~~~~~~~~~~~a~~~~~~a~~~~p~~-~~~~~~lg~~~ 77 (388)
T 1w3b_A 34 GVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLL-AEAYSNLGNVY 77 (388)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCc-hHHHHHHHHHH
Confidence 345677888888999999999999988876653 44455555554
No 143
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=44.15 E-value=66 Score=30.59 Aligned_cols=47 Identities=21% Similarity=0.317 Sum_probs=30.8
Q ss_pred hccccccccccccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhH------HHHHHH
Q 024929 128 KGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHPIRLGLALNF------SVFYYE 186 (260)
Q Consensus 128 kgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~------SVF~yE 186 (260)
-||..||...+ ..|...|.+|..+.=.+= ..-..||+.-.+ +||||-
T Consensus 158 LGDL~RY~~~~----------~~A~~~Y~~A~~~~P~~G--~~~nqLavla~~~~~~l~a~y~y~ 210 (497)
T 1ya0_A 158 LGDIARYRNQT----------SQAESYYRHAAQLVPSNG--QPYNQLAILASSKGDHLTTIFYYC 210 (497)
T ss_dssp HHHHHHHTTCH----------HHHHHHHHHHHHHCTTBS--HHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cccHHHHHHHH----------HHHHHHHHHHHHhCCCCC--chHHHHHHHHhcccccHHHHHHHH
Confidence 79999999764 578999999987641111 111456655554 577763
No 144
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=44.07 E-value=80 Score=22.07 Aligned_cols=59 Identities=14% Similarity=0.098 Sum_probs=41.3
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 024929 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSS 68 (260)
Q Consensus 8 e~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~Lt~eERnLlsvAyKn~i~~~R~s~R~l~~ 68 (260)
.-+..++.+..+.|+|++.+.++++++..+|.. .+=...+..+|-. .+....|...+..
T Consensus 28 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~-~~~~~~l~~~~~~-~g~~~~A~~~~~~ 86 (117)
T 3k9i_A 28 ECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNH-QALRVFYAMVLYN-LGRYEQGVELLLK 86 (117)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-HTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc-hHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 445678889999999999999999999887775 4444455555543 3445555555543
No 145
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=43.54 E-value=28 Score=31.94 Aligned_cols=53 Identities=13% Similarity=0.090 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhh
Q 024929 148 AANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISEL 209 (260)
Q Consensus 148 ~~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~l 209 (260)
.+.|...|++|+.. +| ...+-+.|.-|..+..|+.+.|.+.+.++|+.|+..+
T Consensus 62 ~~~a~~~~~ral~~--------~p-~~~lw~~~~~~~~~~~~~~~~a~~~~~~~~~~al~~~ 114 (530)
T 2ooe_A 62 YDKVEKLFQRCLMK--------VL-HIDLWKCYLSYVRETKGKLPSYKEKMAQAYDFALDKI 114 (530)
T ss_dssp HHHHHHHHHHHTTT--------CC-CHHHHHHHHHHHHHHTTTSTTHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc--------CC-ChHHHHHHHHHHHHHccchhhHHHHHHHHHHHHHHHC
Confidence 45788888888632 23 2457888888999999999999999999999998753
No 146
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=43.31 E-value=92 Score=22.59 Aligned_cols=32 Identities=19% Similarity=0.208 Sum_probs=19.6
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Q 024929 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVE 39 (260)
Q Consensus 8 e~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~ 39 (260)
+.+..+|....+.|+|++.+.++++++..+|.
T Consensus 19 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~ 50 (142)
T 2xcb_A 19 EQLYALGFNQYQAGKWDDAQKIFQALCMLDHY 50 (142)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHHhCCc
Confidence 34455566666666777766666666665543
No 147
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=42.75 E-value=70 Score=21.06 Aligned_cols=28 Identities=25% Similarity=0.330 Sum_probs=15.8
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhcCC
Q 024929 11 VYVAKLAEQAERYDEMVDAMKNVAKLDV 38 (260)
Q Consensus 11 ~~~AklaeqaeRy~Dm~~~mk~~i~~~~ 38 (260)
..++.+..+.|+|++.+.++++++...+
T Consensus 10 ~~~~~~~~~~~~~~~A~~~~~~a~~~~~ 37 (112)
T 2kck_A 10 YLEGVLQYDAGNYTESIDLFEKAIQLDP 37 (112)
T ss_dssp GGHHHHHHSSCCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhCc
Confidence 3455555555666666666666555544
No 148
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=42.47 E-value=86 Score=22.03 Aligned_cols=53 Identities=13% Similarity=0.055 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024929 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (260)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 203 (260)
..|..-|++|+......- ...+.+-.+..++++-+| -+|+.++|+...++|+.
T Consensus 22 ~~A~~W~~~Al~~~~~~~-~~~~~~~~i~~~L~~~~~-~~g~~~~A~~~~~~al~ 74 (104)
T 2v5f_A 22 YHTELWMEQALRQLDEGE-ISTIDKVSVLDYLSYAVY-QQGDLDKALLLTKKLLE 74 (104)
T ss_dssp HHHHHHHHHHHHHHHTTC-CCSSCHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhccC-CCcccHHHHHHHHHHHHH-HccCHHHHHHHHHHHHh
Confidence 467888888887764221 112334445555555555 57999999998888764
No 149
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=41.92 E-value=52 Score=30.34 Aligned_cols=15 Identities=7% Similarity=-0.086 Sum_probs=7.9
Q ss_pred hCChHHHHHHHHHHH
Q 024929 188 MNSPERACHLAKQAF 202 (260)
Q Consensus 188 ~~~~~~A~~iAk~af 202 (260)
+|+.++|+...++|+
T Consensus 87 ~g~~~eA~~~~~~al 101 (477)
T 1wao_1 87 LGKFRAALRDYETVV 101 (477)
T ss_dssp HTCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHH
Confidence 456655555544444
No 150
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=41.77 E-value=81 Score=22.84 Aligned_cols=47 Identities=13% Similarity=0.044 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024929 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 204 (260)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~ 204 (260)
+.|...|+++... .|.+| ....+.+..++ -.|+.++|+...++++..
T Consensus 93 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~ 139 (186)
T 3as5_A 93 DLAVPLLIKVAEA-----NPINF---NVRFRLGVALD-NLGRFDEAIDSFKIALGL 139 (186)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CcHhH---HHHHHHHHHHH-HcCcHHHHHHHHHHHHhc
Confidence 4677788887755 23343 33455555554 479999999988887654
No 151
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=41.70 E-value=1.3e+02 Score=23.77 Aligned_cols=62 Identities=6% Similarity=-0.011 Sum_probs=42.2
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC--CCHHHHHHHHHHHhhhhhhhHHHHHHHHHHh
Q 024929 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVE--LTVEERNLLSVGYKNVIGARRASWRILSSIE 70 (260)
Q Consensus 8 e~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~--Lt~eERnLlsvAyKn~i~~~R~s~R~l~~ie 70 (260)
+.+..+|...-+.|+|++++..+++++...|. ...+-...+..+|-. .+....|...+..+.
T Consensus 5 ~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~~~l 68 (225)
T 2yhc_A 5 NEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYK-NADLPLAQAAIDRFI 68 (225)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHH
Confidence 35667888899999999999999999987654 334445555555432 455566666665544
No 152
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=40.07 E-value=55 Score=26.26 Aligned_cols=95 Identities=16% Similarity=0.177 Sum_probs=56.3
Q ss_pred hccccccccccccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCc---chHHHhhhHHHHH----HHHhCChHHHHHHHHH
Q 024929 128 KGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHP---IRLGLALNFSVFY----YEIMNSPERACHLAKQ 200 (260)
Q Consensus 128 kgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~P---irLgLaLN~SVF~----yEi~~~~~~A~~iAk~ 200 (260)
.|.-+.=+..+..+.+..+..+.|..+|++|+++ .|.++ ..||.++.---|+ -+-.++.++|+.
T Consensus 42 ~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~l-----dP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~---- 112 (158)
T 1zu2_A 42 WGGVLLELSQFHSISDAKQMIQEAITKFEEALLI-----DPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQ---- 112 (158)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH-----CTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH----
T ss_pred HHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHh-----CcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHH----
Confidence 4555655666677777777889999999999865 45555 3455555322221 111245556655
Q ss_pred HHHHHHHhhcccCccchHhHHHHHHHHHhhHhhhcc
Q 024929 201 AFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTS 236 (260)
Q Consensus 201 afd~Ai~~ld~l~ee~y~ds~~IlqLLrDNl~lW~~ 236 (260)
+|+.|+. + +.+ +.+...-+++..++-.+|..
T Consensus 113 ~~~kAl~-l---~P~-~~~y~~al~~~~ka~el~~~ 143 (158)
T 1zu2_A 113 FFQQAVD-E---QPD-NTHYLKSLEMTAKAPQLHAE 143 (158)
T ss_dssp HHHHHHH-H---CTT-CHHHHHHHHHHHTHHHHHHH
T ss_pred HHHHHHH-h---CCC-CHHHHHHHHHHHhCHhccCc
Confidence 5666664 2 221 23445557777888887764
No 153
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=38.62 E-value=51 Score=27.63 Aligned_cols=50 Identities=16% Similarity=0.066 Sum_probs=29.9
Q ss_pred HHHHHHHHHHhh--cCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 024929 153 KAYETATTAAEA--DLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAI 206 (260)
Q Consensus 153 ~aY~~A~~~a~~--~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai 206 (260)
.-|++|....+. .+.|.++ ....+.+..|+ -+|+.++|+...++|+.-.-
T Consensus 52 ~~~~~A~~~~~~al~~~p~~~---~~~~~lg~~~~-~~g~~~~A~~~~~~al~l~p 103 (281)
T 2c2l_A 52 QQPEQALADCRRALELDGQSV---KAHFFLGQCQL-EMESYDEAIANLQRAYSLAK 103 (281)
T ss_dssp TCHHHHHHHHHHHTTSCTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCc
Confidence 345666665543 3444443 44455555554 47888888888888776543
No 154
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=38.44 E-value=1.3e+02 Score=22.91 Aligned_cols=45 Identities=16% Similarity=0.005 Sum_probs=30.1
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHH
Q 024929 7 RENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGY 52 (260)
Q Consensus 7 re~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~Lt~eERnLlsvAy 52 (260)
-+-+..++.+..+.|+|++.+.++++++..+|. +.+=...|..+|
T Consensus 36 ~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~-~~~~~~~lg~~~ 80 (151)
T 3gyz_A 36 MDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFY-NVDYIMGLAAIY 80 (151)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHH
Confidence 345667777777888888888888888877664 334444455554
No 155
>3caz_A BAR protein; thermo-acidophilic RED ALGA, protein structure initiative, PSI, center for eukaryotic structural genomics, signaling protein; 3.34A {Galdieria sulphuraria}
Probab=37.07 E-value=1.9e+02 Score=24.42 Aligned_cols=111 Identities=19% Similarity=0.287 Sum_probs=60.7
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhCchHHHHHHHHHHHHH
Q 024929 13 VAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKV 92 (260)
Q Consensus 13 ~AklaeqaeRy~Dm~~~mk~~i~~~~~Lt~eERnLlsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i~~yk~ki 92 (260)
.|+|.+....|-.||+-+|.-.. +..|..|.=.-||=-+.. ++.+. ....++..=+..-.+-
T Consensus 100 iarllekiqkyfQ~IEtlK~ql~-----nf~e~RLiYDHYKlKvdE----------LEK~~---KdSeKI~RNQsKLssA 161 (294)
T 3caz_A 100 IARLLEKIQKYRQEIEEIKKEYK-----ETDKYRERYDHYKVKLDN----------LEKKN---KDQERIERNQQKFKDA 161 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHH----------HHHHT---CCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-----hhHHHHHHHHHHHHhHHH----------HHhcc---chHHHHHHhHHHhhhH
Confidence 57788877778777777754221 123445555555544432 22211 1112222222222333
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHHHHHhh
Q 024929 93 ESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEA 164 (260)
Q Consensus 93 e~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~ 164 (260)
+.--..+|-++|+-.+ ++-|.|||.++|..+. +=...--|-+|++.|..
T Consensus 162 EtaYkqvcsDiInkMn-----------------kll~n~~riineaasa------vwstqlqyakaleaaan 210 (294)
T 3caz_A 162 EAAYSSVCADLIQKME-----------------TVWKKHVSIFAEAASA------VWSTQLQYAKALEAAAN 210 (294)
T ss_dssp HHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHhcC
Confidence 4445667777777665 4557788888886543 22234458888888754
No 156
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=37.00 E-value=62 Score=20.80 Aligned_cols=59 Identities=17% Similarity=0.206 Sum_probs=40.9
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 024929 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSS 68 (260)
Q Consensus 8 e~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~Lt~eERnLlsvAyKn~i~~~R~s~R~l~~ 68 (260)
.-+..++.+..+.++|++.+.++++++..+|.- ..=...+..+|-. .+....+...+..
T Consensus 10 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~-~~~~~~l~~~~~~-~~~~~~A~~~~~~ 68 (91)
T 1na3_A 10 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN-AEAWYNLGNAYYK-QGDYDEAIEYYQK 68 (91)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCC-HHHHHHHHHHHHH-HhhHHHHHHHHHH
Confidence 345678889999999999999999999876653 3444455555543 4455566666554
No 157
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=36.61 E-value=4.7e+02 Score=28.80 Aligned_cols=23 Identities=17% Similarity=0.115 Sum_probs=19.9
Q ss_pred hHHHHHHHHhCChHHHHHHHHHH
Q 024929 179 NFSVFYYEIMNSPERACHLAKQA 201 (260)
Q Consensus 179 N~SVF~yEi~~~~~~A~~iAk~a 201 (260)
.-.|-+|+-.|..++||.+..+|
T Consensus 1284 eeli~yYe~~G~feEAI~LlE~a 1306 (1630)
T 1xi4_A 1284 EELINYYQDRGYFEELITMLEAA 1306 (1630)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHH
Confidence 35567889999999999999988
No 158
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=36.22 E-value=1.9e+02 Score=24.06 Aligned_cols=30 Identities=10% Similarity=0.232 Sum_probs=22.9
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Q 024929 10 FVYVAKLAEQAERYDEMVDAMKNVAKLDVE 39 (260)
Q Consensus 10 l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~ 39 (260)
.+.++.+..+.|+++++.....+++...|.
T Consensus 102 ~~~~~~~~~~~~~~~~A~~~~~~al~~~p~ 131 (308)
T 2ond_A 102 YFAYADYEESRMKYEKVHSIYNRLLAIEDI 131 (308)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTSSSS
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhcccc
Confidence 456777778888888888888888876553
No 159
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=36.17 E-value=57 Score=21.76 Aligned_cols=29 Identities=7% Similarity=0.061 Sum_probs=20.1
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Q 024929 11 VYVAKLAEQAERYDEMVDAMKNVAKLDVE 39 (260)
Q Consensus 11 ~~~AklaeqaeRy~Dm~~~mk~~i~~~~~ 39 (260)
+.+|....+.|+|++.+..+++++..+|.
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~ 32 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPV 32 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCC
Confidence 45666666777777777777777766544
No 160
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=35.38 E-value=87 Score=23.66 Aligned_cols=33 Identities=21% Similarity=0.204 Sum_probs=23.4
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCC
Q 024929 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVEL 40 (260)
Q Consensus 8 e~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~L 40 (260)
+-+..++.+..+.|+|++.+.++.+++..+|..
T Consensus 109 ~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~ 141 (176)
T 2r5s_A 109 ELACELAVQYNQVGRDEEALELLWNILKVNLGA 141 (176)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTT
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHhCccc
Confidence 344567777777788888887777777766654
No 161
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=35.08 E-value=77 Score=24.24 Aligned_cols=53 Identities=11% Similarity=0.036 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHhhcC--------CCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHH
Q 024929 149 ANSMKAYETATTAAEADL--------PPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAF 202 (260)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L--------~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~af 202 (260)
+.|...|++|+++...+- ...+|-......|.+..++. +|+.++|+...++|+
T Consensus 88 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al 148 (213)
T 1hh8_A 88 DLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAK-KEEWKKAEEQLALAT 148 (213)
T ss_dssp HHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHH-ccCHHHHHHHHHHHH
Confidence 568888999886542100 00334455666777777665 699999987666554
No 162
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=34.77 E-value=1.2e+02 Score=21.56 Aligned_cols=58 Identities=16% Similarity=0.014 Sum_probs=41.2
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHH
Q 024929 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILS 67 (260)
Q Consensus 8 e~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~Lt~eERnLlsvAyKn~i~~~R~s~R~l~ 67 (260)
.....++...-+.|+|++.+..+++++..+|. +.+=...+..+|-. .+....|...+.
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~-~g~~~~A~~~~~ 75 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPE-REEAWRSLGLTQAE-NEKDGLAIIALN 75 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 45677888888999999999999999988776 34555666666543 344455555554
No 163
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=34.30 E-value=1.3e+02 Score=21.51 Aligned_cols=46 Identities=15% Similarity=0.034 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024929 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (260)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 203 (260)
+.|...|++|+.+ .|.+| ....+.++.+.. +|+.++|+...++|+.
T Consensus 34 ~~A~~~~~~al~~-----~P~~~---~a~~~lg~~~~~-~g~~~~A~~~~~~al~ 79 (121)
T 1hxi_A 34 AEAALAFEAVCQK-----EPERE---EAWRSLGLTQAE-NEKDGLAIIALNHARM 79 (121)
T ss_dssp HHHHHHHHHHHHH-----STTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 5677778877753 34444 233444554444 6999998877666544
No 164
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=34.21 E-value=2.6e+02 Score=25.20 Aligned_cols=161 Identities=14% Similarity=0.038 Sum_probs=76.1
Q ss_pred HhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhh-HHHHHHHHHHhhhhhhhCchH-HHHHHHHHHHHHHHHH
Q 024929 19 QAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGAR-RASWRILSSIEQKEEAKGNEV-NAKRIKEYRQKVESEL 96 (260)
Q Consensus 19 qaeRy~Dm~~~mk~~i~~~~~Lt~eERnLlsvAyKn~i~~~-R~s~R~l~~ieqk~~~~~~~~-~~~~i~~yk~kie~EL 96 (260)
..++++..+..+.++... .+-..+-...+..+|-. .+.. ..|...+....+... .+.. ...+-.-|...
T Consensus 80 ~~~~~~~al~~l~~~~~~-~~~~a~~~~~lg~~~~~-~g~~~~~A~~~~~~al~~~p--~~~~a~~~lg~~~~~~----- 150 (474)
T 4abn_A 80 VQEEMEKTLQQMEEVLGS-AQVEAQALMLKGKALNV-TPDYSPEAEVLLSKAVKLEP--ELVEAWNQLGEVYWKK----- 150 (474)
T ss_dssp HHHHHHHHHHHHHHHHTT-CCCCHHHHHHHHHHHTS-SSSCCHHHHHHHHHHHHHCT--TCHHHHHHHHHHHHHH-----
T ss_pred HHHHHHHHHHHHHHHhcc-CchhHHHHHHHHHHHHh-ccccHHHHHHHHHHHHhhCC--CCHHHHHHHHHHHHHc-----
Confidence 345567777777776543 33455556666666543 3445 556665544322211 1111 11111111110
Q ss_pred HHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHH
Q 024929 97 SDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHPIRLGL 176 (260)
Q Consensus 97 ~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~PirLgL 176 (260)
.--.+.+...+..|-- ++.. ..+...|..|+.+.. ....++..-.+.|...|++|+++ .|.+|. .
T Consensus 151 -g~~~~A~~~~~~al~~---~p~~--~~~~~lg~~~~~~~~-~~~~~~~g~~~~A~~~~~~al~~-----~p~~~~---~ 215 (474)
T 4abn_A 151 -GDVTSAHTCFSGALTH---CKNK--VSLQNLSMVLRQLQT-DSGDEHSRHVMDSVRQAKLAVQM-----DVLDGR---S 215 (474)
T ss_dssp -TCHHHHHHHHHHHHTT---CCCH--HHHHHHHHHHTTCCC-SCHHHHHHHHHHHHHHHHHHHHH-----CTTCHH---H
T ss_pred -CCHHHHHHHHHHHHhh---CCCH--HHHHHHHHHHHHhcc-CChhhhhhhHHHHHHHHHHHHHh-----CCCCHH---H
Confidence 1112334444443321 1222 444557777766532 12223333457889999999875 355542 2
Q ss_pred hhhHHHHHHHH---h----CChHHHHHHHHHHHH
Q 024929 177 ALNFSVFYYEI---M----NSPERACHLAKQAFD 203 (260)
Q Consensus 177 aLN~SVF~yEi---~----~~~~~A~~iAk~afd 203 (260)
..|.+..|... . |+.++|+...++|+.
T Consensus 216 ~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~ 249 (474)
T 4abn_A 216 WYILGNAYLSLYFNTGQNPKISQQALSAYAQAEK 249 (474)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhccccchHHHHHHHHHHHHH
Confidence 23333333321 1 556677666555544
No 165
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=33.45 E-value=1.1e+02 Score=20.41 Aligned_cols=33 Identities=12% Similarity=0.020 Sum_probs=28.1
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCC
Q 024929 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVEL 40 (260)
Q Consensus 8 e~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~L 40 (260)
+.+..++.+....|+|++.+.+..+++..+|.-
T Consensus 5 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~ 37 (111)
T 2l6j_A 5 EKQKEQGNSLFKQGLYREAVHCYDQLITAQPQN 37 (111)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC
Confidence 456778888889999999999999999877653
No 166
>3onj_A T-snare VTI1; helix, HABC, protein transport; 1.92A {Saccharomyces cerevisiae} PDB: 3onl_C
Probab=32.48 E-value=1.4e+02 Score=21.66 Aligned_cols=78 Identities=9% Similarity=0.144 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhh---hhCchHHHHHHHHHHHHHHHHHHHH
Q 024929 23 YDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEE---AKGNEVNAKRIKEYRQKVESELSDI 99 (260)
Q Consensus 23 y~Dm~~~mk~~i~~~~~Lt~eERnLlsvAyKn~i~~~R~s~R~l~~ieqk~~---~~~~~~~~~~i~~yk~kie~EL~~~ 99 (260)
|...+.-+...+..-+.++-++|+-+.......+..-..=++.+. +|-+.- ..........++.||..+..+|..-
T Consensus 10 f~~~~~~i~~~l~~~~~~~ge~Rk~~i~~ie~~ldEA~ell~qMe-lE~~~~~~p~~~R~~~~~klr~Yk~dl~~~lk~~ 88 (97)
T 3onj_A 10 FKTTLEQAKASLAEAPSQPLSQRNTTLKHVEQQQDELFDLLDQMD-VEVNNSIGDASERATYKAKLREWKKTIQSDIKRP 88 (97)
T ss_dssp HHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444678889999887777777776544444432 222211 0112245678889988887766543
Q ss_pred HH
Q 024929 100 CN 101 (260)
Q Consensus 100 C~ 101 (260)
-+
T Consensus 89 lk 90 (97)
T 3onj_A 89 LQ 90 (97)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 167
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=32.28 E-value=1.6e+02 Score=22.09 Aligned_cols=63 Identities=8% Similarity=0.022 Sum_probs=43.1
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhh
Q 024929 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQ 71 (260)
Q Consensus 8 e~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~Lt~eERnLlsvAyKn~i~~~R~s~R~l~~ieq 71 (260)
.-+..++.+..+.|+|++.+.++.+++...|.. ..-...+..+|-...+....+...+....+
T Consensus 43 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~-~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~ 105 (225)
T 2vq2_A 43 LAWLVRAEIYQYLKVNDKAQESFRQALSIKPDS-AEINNNYGWFLCGRLNRPAESMAYFDKALA 105 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHTTTCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC-hHHHHHHHHHHHHhcCcHHHHHHHHHHHHc
Confidence 345678888899999999999999999876653 344455555554432556666666655443
No 168
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=31.07 E-value=99 Score=23.01 Aligned_cols=48 Identities=17% Similarity=0.190 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCh--HHHHHHHHHHHHH
Q 024929 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSP--ERACHLAKQAFDE 204 (260)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~--~~A~~iAk~afd~ 204 (260)
+.|..+|++|+.+. |.+| .+..+++..+|.-.|+. ++|+...++++..
T Consensus 61 ~~A~~~~~~al~~~-----p~~~---~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~ 110 (177)
T 2e2e_A 61 SNSLLAYRQALQLR-----GENA---ELYAALATVLYYQASQHMTAQTRAMIDKALAL 110 (177)
T ss_dssp HHHHHHHHHHHHHH-----CSCH---HHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcC-----CCCH---HHHHHHHHHHHHhcCCcchHHHHHHHHHHHHh
Confidence 57899999998764 3444 34556666656557887 9998887777643
No 169
>2wh5_A Acyl-COA-binding domain-containing protein 4; alternative splicing, fatty acid metabolism, lipid transport, lipid binding protein; HET: STE ST9 COA; 2.60A {Homo sapiens}
Probab=30.90 E-value=73 Score=23.98 Aligned_cols=36 Identities=19% Similarity=0.244 Sum_probs=27.0
Q ss_pred CCHHHHHHHHHHHHhcC-CCCCHHHHHHHHHHHhhhh
Q 024929 21 ERYDEMVDAMKNVAKLD-VELTVEERNLLSVGYKNVI 56 (260)
Q Consensus 21 eRy~Dm~~~mk~~i~~~-~~Lt~eERnLlsvAyKn~i 56 (260)
++|+.++..++.+-..+ ..++.+++-.|---||...
T Consensus 10 ~~F~~A~~~vk~l~~~g~~~ps~e~~L~LYaLyKQAt 46 (106)
T 2wh5_A 10 KQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQAT 46 (106)
T ss_dssp HHHHHHHHHHHHSCSSCSCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHhhhc
Confidence 56888888888764332 3689999988888888864
No 170
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=30.10 E-value=1.5e+02 Score=28.53 Aligned_cols=53 Identities=15% Similarity=0.037 Sum_probs=35.9
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHHHhhcCCC-CCcchHHHhhhHHHHHHHHhCC
Q 024929 136 AEFKFGDEKKEAAANSMKAYETATTAAEADLPP-THPIRLGLALNFSVFYYEIMNS 190 (260)
Q Consensus 136 aE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~p-t~PirLgLaLN~SVF~yEi~~~ 190 (260)
||....+.-.+++++|.++|++|++..+. +.. .+|--.-.+||-| -.||..||
T Consensus 436 ~e~~~n~~a~~yA~kAi~~Y~~Ai~~L~k-~~~tdd~~~v~~~~~~a-k~yE~aGD 489 (526)
T 2wb7_A 436 AKGMNNENAIEYAQGAIDEYKAAINDLQK-AAQQDDYQMFLNYLNAA-KKHEMAGD 489 (526)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHH-HTTCCSHHHHHHHHHHH-HHHHHHHH
T ss_pred hhccCCHHHHHHHHHHHHHHHHHHHHHHh-hhccCCHHHHHHHHHHh-hhhhhccH
Confidence 56667777788999999999999999964 554 4444444444433 33665543
No 171
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=30.04 E-value=1.4e+02 Score=24.92 Aligned_cols=48 Identities=10% Similarity=0.141 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024929 148 AANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (260)
Q Consensus 148 ~~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 203 (260)
.+.|...|++|+. ++|.+|.. +-++++.|+.. .|+.++|+.+-++|+.
T Consensus 115 ~~~A~~~~~~al~-----~~p~~~~~--~~~~~~~~~~~-~~~~~~A~~~~~~a~~ 162 (308)
T 2ond_A 115 YEKVHSIYNRLLA-----IEDIDPTL--VYIQYMKFARR-AEGIKSGRMIFKKARE 162 (308)
T ss_dssp HHHHHHHHHHHHT-----SSSSCTHH--HHHHHHHHHHH-HHCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh-----ccccCccH--HHHHHHHHHHH-hcCHHHHHHHHHHHHh
Confidence 3566666666653 56666632 56677777665 5777777655555543
No 172
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=28.85 E-value=1.4e+02 Score=22.84 Aligned_cols=59 Identities=19% Similarity=0.157 Sum_probs=41.5
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 024929 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSS 68 (260)
Q Consensus 8 e~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~Lt~eERnLlsvAyKn~i~~~R~s~R~l~~ 68 (260)
.-+..+|.+..+.|+|++++.+..+++..+|.. ..=...+..+|- ..+....|...+..
T Consensus 89 ~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~-~~~~~~lg~~~~-~~~~~~~A~~~~~~ 147 (198)
T 2fbn_A 89 SCNLNLATCYNKNKDYPKAIDHASKVLKIDKNN-VKALYKLGVANM-YFGFLEEAKENLYK 147 (198)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC-HHHHHHHHHHHH-HHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCccc-HHHHHHHHHHHH-HcccHHHHHHHHHH
Confidence 345678888889999999999999999886653 444555666653 34555666666654
No 173
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=28.23 E-value=1.8e+02 Score=21.46 Aligned_cols=44 Identities=16% Similarity=0.041 Sum_probs=28.5
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHH
Q 024929 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGY 52 (260)
Q Consensus 8 e~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~Lt~eERnLlsvAy 52 (260)
+-+..++.+..+.|+|++.+.++++++..+|. +.+=...+..+|
T Consensus 22 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~ 65 (148)
T 2vgx_A 22 EQLYSLAFNQYQSGXYEDAHXVFQALCVLDHY-DSRFFLGLGACR 65 (148)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHcCcc-cHHHHHHHHHHH
Confidence 44556777777788888888888887776654 333344445544
No 174
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=27.67 E-value=1.7e+02 Score=24.25 Aligned_cols=33 Identities=15% Similarity=0.114 Sum_probs=24.9
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCC
Q 024929 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVEL 40 (260)
Q Consensus 8 e~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~L 40 (260)
+-...+|.+..+.|||++.+..+.+++..+|..
T Consensus 220 ~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~ 252 (287)
T 3qou_A 220 ALATQLALQLHQVGRNEEALELLFGHLRXDLTA 252 (287)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTG
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHhccccc
Confidence 345667777888888888888888888777665
No 175
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=26.95 E-value=1.9e+02 Score=21.40 Aligned_cols=75 Identities=11% Similarity=-0.087 Sum_probs=49.2
Q ss_pred hHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHH
Q 024929 120 STVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAK 199 (260)
Q Consensus 120 skvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk 199 (260)
..+..+-..|..|...-+ .+.|...|++|+.++.. . .+|...+.++..-...|.-.|+.++|+...+
T Consensus 105 ~~~~~~~~lg~~~~~~g~----------~~~A~~~~~~al~~~~~-~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 171 (203)
T 3gw4_A 105 AASANAYEVATVALHFGD----------LAGARQEYEKSLVYAQQ-A--DDQVAIACAFRGLGDLAQQEKNLLEAQQHWL 171 (203)
T ss_dssp HHHHHHHHHHHHHHHHTC----------HHHHHHHHHHHHHHHHH-T--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCC----------HHHHHHHHHHHHHHHHh-c--cchHHHHHHHHHHHHHHHHCcCHHHHHHHHH
Confidence 344444556665544322 35789999999998853 2 3455556555555555666899999998888
Q ss_pred HHHHHHHH
Q 024929 200 QAFDEAIS 207 (260)
Q Consensus 200 ~afd~Ai~ 207 (260)
+|++-+-.
T Consensus 172 ~al~~~~~ 179 (203)
T 3gw4_A 172 RARDIFAE 179 (203)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77776543
No 176
>3iyk_A VP5; icosahedral virus; HET: MNA; 7.00A {Bluetongue virus}
Probab=26.35 E-value=3.5e+02 Score=25.93 Aligned_cols=196 Identities=17% Similarity=0.235 Sum_probs=98.6
Q ss_pred CCHHHHHHHHHHHHhcCCCCCHH---HHHHHHHH---HhhhhhhhHHHHHHHHHHhhhhhhhCchHHHHHHHHHHHHHHH
Q 024929 21 ERYDEMVDAMKNVAKLDVELTVE---ERNLLSVG---YKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVES 94 (260)
Q Consensus 21 eRy~Dm~~~mk~~i~~~~~Lt~e---ERnLlsvA---yKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i~~yk~kie~ 94 (260)
++|..-++-+++++........+ |-.+|-.| |..++..-+..+..|..-.+++...-+..-...+..||.++..
T Consensus 121 ~k~g~~l~~v~~~~~~~~~~e~~e~~q~~~LekAl~s~~~i~~~e~~~l~~L~~AL~kE~~~Rt~dE~~mi~~yr~k~~a 200 (526)
T 3iyk_A 121 EKFGKELEEVYNFMNGEANAEIEDEKQFDILNKAVTSYNKILTEEDLQMRRLATALQKEIGERTHAETVMVKEYRDKIDA 200 (526)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHHH
Confidence 55667777777777654445444 44566655 5567777788888887766776544444456777888777632
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhccccccccc-cc-cchhHHHH---HHHHHHHHHHHHHH--------
Q 024929 95 ELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAE-FK-FGDEKKEA---AANSMKAYETATTA-------- 161 (260)
Q Consensus 95 EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE-~~-~~~~~~~~---~~~A~~aY~~A~~~-------- 161 (260)
== +.|++=..-|+- |+.==-.-|-||.---.|| +. -|.--... ..-+...|+-.--+
T Consensus 201 L~-----~aIe~Er~~~~E-----EAIqe~~dmsaeI~E~AaeEVP~vGag~At~iATaRaieg~yKLkkvI~aLtGidl 270 (526)
T 3iyk_A 201 LK-----NAIEVERDGMQE-----EAIQEIAGMTADVLEAASEEVPLIGAGMATAVATGRAIEGAYKLKKVINALSGIDL 270 (526)
T ss_pred HH-----HHHHHHHhHHHH-----HHHHHHhcchHHHHHHHhhhCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 11 111111111110 0000011233443333332 11 12222221 22335556644333
Q ss_pred HhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHH--HHHHHHHHhhcccCccchHhHHHHHHHHHh
Q 024929 162 AEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAK--QAFDEAISELDTLNEESYKDSTLIMQLLRD 229 (260)
Q Consensus 162 a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk--~afd~Ai~~ld~l~ee~y~ds~~IlqLLrD 229 (260)
.....|+-||--|..+|-. =+ .-.+|..-|.-+.. ..+++--.+++.+.++..+-....++--+.
T Consensus 271 sHl~~P~I~p~~iet~L~~-~~--~~i~D~~L~~~v~sK~~~v~E~~~Ev~Hi~~~i~P~~kk~~~~~~~ 337 (526)
T 3iyk_A 271 THLRTPKIEPSVVSTILEY-RA--KEIPDNALAVSVLSKNRAIQENHKELMHIKNEILPRFKKAMDEEKE 337 (526)
T ss_pred hhccCCCCCHHHHHHHHhC-CC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2346889999988888842 01 12233333333222 446666666666766665555555544333
No 177
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=26.30 E-value=2.4e+02 Score=22.33 Aligned_cols=64 Identities=9% Similarity=0.060 Sum_probs=45.1
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC--CCHHHHHHHHHHHhhh-------hhhhHHHHHHHHHHhh
Q 024929 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVE--LTVEERNLLSVGYKNV-------IGARRASWRILSSIEQ 71 (260)
Q Consensus 8 e~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~--Lt~eERnLlsvAyKn~-------i~~~R~s~R~l~~ieq 71 (260)
+-+..++.+..+.|+|++++..+++++...|. ...+=...+..+|-.. .+....|...+..+..
T Consensus 53 ~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~ 125 (261)
T 3qky_A 53 DAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFID 125 (261)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHH
Confidence 34678899999999999999999999987664 3344455556665442 5666667777665443
No 178
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=26.28 E-value=54 Score=28.48 Aligned_cols=49 Identities=14% Similarity=0.168 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCc--------------chHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024929 149 ANSMKAYETATTAAEADLPPTHP--------------IRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (260)
Q Consensus 149 ~~A~~aY~~A~~~a~~~L~pt~P--------------irLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 203 (260)
+.|...|++|+.+. |.++ ++..+.+|.+..|+. +|+.++|+...++|+.
T Consensus 196 ~~A~~~y~~Al~~~-----p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 258 (338)
T 2if4_A 196 EEAMQQYEMAIAYM-----GDDFMFQLYGKYQDMALAVKNPCHLNIAACLIK-LKRYDEAIGHCNIVLT 258 (338)
T ss_dssp HHHHHHHHHHHHHS-----CHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHT-TTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----ccchhhhhcccHHHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
No 179
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=26.09 E-value=1.1e+02 Score=28.13 Aligned_cols=9 Identities=11% Similarity=0.069 Sum_probs=3.5
Q ss_pred HHHHHHHHH
Q 024929 151 SMKAYETAT 159 (260)
Q Consensus 151 A~~aY~~A~ 159 (260)
|...|++|+
T Consensus 59 A~~~~~~al 67 (477)
T 1wao_1 59 ALGDATRAI 67 (477)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 333344433
No 180
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=25.54 E-value=2.4e+02 Score=22.04 Aligned_cols=46 Identities=4% Similarity=-0.122 Sum_probs=34.4
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCH--HHHHHHHHHHh
Q 024929 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTV--EERNLLSVGYK 53 (260)
Q Consensus 8 e~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~Lt~--eERnLlsvAyK 53 (260)
+-+..++.+..+.|+|++.+..+++++...|.-.. +-.-.+..+|-
T Consensus 42 ~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~ 89 (225)
T 2yhc_A 42 QVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNM 89 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHH
Confidence 45677899999999999999999999988776443 23444555553
No 181
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=24.70 E-value=1.7e+02 Score=19.99 Aligned_cols=57 Identities=14% Similarity=0.009 Sum_probs=28.7
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCH--HHHHHHHHHHhhhhhhhHHHHHHHH
Q 024929 10 FVYVAKLAEQAERYDEMVDAMKNVAKLDVELTV--EERNLLSVGYKNVIGARRASWRILS 67 (260)
Q Consensus 10 l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~Lt~--eERnLlsvAyKn~i~~~R~s~R~l~ 67 (260)
+..+|....+.|+|++.+..+++++...|.-.. +-...+..+|-. .+....|...+.
T Consensus 5 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~-~~~~~~A~~~~~ 63 (129)
T 2xev_A 5 AYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYA-TRNFQLAEAQFR 63 (129)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHH-hccHHHHHHHHH
Confidence 345566666666666666666666655444322 333344444322 233444444443
No 182
>3ub0_A Non-structural protein 6, NSP6,; feline coronavirus, primer-independen polymerase, replication; 2.60A {Feline infectious peritonitis virus}
Probab=24.39 E-value=55 Score=27.38 Aligned_cols=39 Identities=23% Similarity=0.456 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 024929 148 AANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAI 206 (260)
Q Consensus 148 ~~~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai 206 (260)
-+.|.++|++|.. .. ..|. +++...+|+.|||.+||.=.
T Consensus 19 YE~A~~~Ye~a~~---ng---~~pQ--------------~~Kql~KA~NIAKse~drd~ 57 (199)
T 3ub0_A 19 YEKARADLEEAKK---ND---VSPQ--------------LLKQLTKACNIAKSEFEREA 57 (199)
T ss_dssp HHHHHHHHHHHHH---TT---CCHH--------------HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh---cC---CCHH--------------HHHHHHHHHHHHHHHHhHHH
Confidence 4678888888843 22 2232 35677899999999998633
No 183
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=24.25 E-value=85 Score=25.56 Aligned_cols=72 Identities=15% Similarity=0.139 Sum_probs=47.4
Q ss_pred CCChhHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHHHHHhhcCCCC----CcchHHHhhhHHHHHHHHhCCh
Q 024929 116 SAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPT----HPIRLGLALNFSVFYYEIMNSP 191 (260)
Q Consensus 116 ~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt----~PirLgLaLN~SVF~yEi~~~~ 191 (260)
.++++-.-|+++--.. -.+..+ ...++-.+.|+.|.. .+||+ ..-+.-|=++|+.| .++ +|+
T Consensus 11 ~~yd~W~~yl~llE~~------g~p~~d--~~l~rlrd~YerAia----~~Pp~k~~~wrrYI~LWIrYA~~-~ei-~D~ 76 (161)
T 4h7y_A 11 NNPEDWLSLLLKLEKN------SVPLSD--ALLNKLIGRYSQAIE----ALPPDKYGQNESFARIQVRFAEL-KAI-QEP 76 (161)
T ss_dssp CSHHHHHHHHHHHHHH------TCSCCH--HHHHHHHHHHHHHHH----HSCGGGGTTCHHHHHHHHHHHHH-HHH-HCG
T ss_pred CCHHHHHHHHHHHHHc------CCCchh--hHHHHHHHHHHHHHH----cCCccccccHHHHHHHHHHHHHH-HHh-cCH
Confidence 4677777777763222 001122 567788899998864 46664 33456688999998 455 899
Q ss_pred HHHHHHHHHH
Q 024929 192 ERACHLAKQA 201 (260)
Q Consensus 192 ~~A~~iAk~a 201 (260)
++|.++=+.|
T Consensus 77 d~aR~vy~~a 86 (161)
T 4h7y_A 77 DDARDYFQMA 86 (161)
T ss_dssp GGCHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9888777766
No 184
>2oo2_A Hypothetical protein AF_1782; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Archaeoglobus fulgidus dsm 4304} SCOP: a.8.11.1
Probab=23.69 E-value=61 Score=23.61 Aligned_cols=45 Identities=22% Similarity=0.489 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHHH--HHHHHHHHHhhcCCCCCCChhHHHHHHhhccccccc
Q 024929 83 KRIKEYRQKVESELSDI--CNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYL 135 (260)
Q Consensus 83 ~~i~~yk~kie~EL~~~--C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYl 135 (260)
..+.+|...+++-|..+ +.++++++..++- .++ +|++ |||+-+=+
T Consensus 9 Eki~kYi~~l~eaL~~i~~a~~~l~mA~~Y~~------Da~-~fl~-kGD~v~Al 55 (86)
T 2oo2_A 9 RETLKWLERIEERVKEIEGDEGFMRNIEAYIS------DSR-YFLE-KGDLVRAF 55 (86)
T ss_dssp HHHHHHHHHHHHHGGGEEECHHHHHHHHHHHH------HHH-HHHH-TTCHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH------HHH-HHHH-cCCHHHHH
Confidence 45667777777776655 6899999998882 244 4444 68876444
No 185
>2pmr_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.32A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.8.11.1
Probab=23.53 E-value=1.4e+02 Score=21.65 Aligned_cols=43 Identities=19% Similarity=0.215 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHHH--------HHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccc
Q 024929 84 RIKEYRQKVESELSD--------ICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRY 134 (260)
Q Consensus 84 ~i~~yk~kie~EL~~--------~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRY 134 (260)
.+.+|...+++-|.. ...++++++..++- .++ +|++ |||+-+=
T Consensus 8 ki~kYi~~leeaL~~i~~~~l~~~a~~~l~mA~~Y~~------Da~-~fl~-kGD~v~A 58 (87)
T 2pmr_A 8 RIEKDLELLEKNLMEMKSIKLSDDEEAVVERALNYRD------DSV-YYLE-KGDHITS 58 (87)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHH------HHH-HHHH-TTCHHHH
T ss_pred HHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHH------HHH-HHHH-cCCHHHH
Confidence 344555555554443 44788888888772 244 4434 5887543
No 186
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=22.30 E-value=4.4e+02 Score=23.92 Aligned_cols=32 Identities=9% Similarity=-0.067 Sum_probs=26.1
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Q 024929 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVE 39 (260)
Q Consensus 8 e~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~ 39 (260)
+-+..+|.+..+.|+|++++.+++++++.+|.
T Consensus 24 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 55 (568)
T 2vsy_A 24 VAWLMLADAELGMGDTTAGEMAVQRGLALHPG 55 (568)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 34567788888889999999999999887665
No 187
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=22.19 E-value=2.8e+02 Score=21.48 Aligned_cols=28 Identities=14% Similarity=0.087 Sum_probs=24.6
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHhcCCCC
Q 024929 13 VAKLAEQAERYDEMVDAMKNVAKLDVEL 40 (260)
Q Consensus 13 ~AklaeqaeRy~Dm~~~mk~~i~~~~~L 40 (260)
++.+..+.|+|++.+.+++++++.+|.-
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~~p~~ 87 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQKAPNN 87 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCCCC
Confidence 7888889999999999999999887763
No 188
>2w9y_A CE-FAR-7, fatty acid/retinol binding protein protein 7, isoform A, confirmed by transcript...; lipid transport; HET: CSX; 1.80A {Caenorhabditis elegans}
Probab=21.78 E-value=27 Score=27.89 Aligned_cols=74 Identities=14% Similarity=0.215 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhccccccccccccch--hHHHHHHHHHHHHHHHHHHHhhcCCCCCc
Q 024929 95 ELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGD--EKKEAAANSMKAYETATTAAEADLPPTHP 171 (260)
Q Consensus 95 EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~--~~~~~~~~A~~aY~~A~~~a~~~L~pt~P 171 (260)
+|-.-...+.+.|...| .+-+++++-|.-+|.+-+---.++...|. +..++.. ..+.|+.-.+-+++.|..+-|
T Consensus 61 ~L~~K~~~l~~~lk~Ki--~~L~Peak~Fv~kli~~~r~l~~~~~~G~k~~~~~lK~-~~~~ykaLS~~aK~dL~k~FP 136 (140)
T 2w9y_A 61 ELGKRLATVLEGNKKRL--DGLSPAAVEYAKKLIHMVTTTLCSLTVGKPIDDADAKR-LHQEFQSLSSEDQAALRKNNP 136 (140)
T ss_dssp HHHHHHHHHHHHHHHTT--TTCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCTHHHHH-HHHHHHTSCHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHHHH--HcCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHH-HHHHHHcCCHHHHHHHHHhCc
Confidence 44555556666777777 44578999999998776655555543331 1122222 226666544445444444444
No 189
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=20.82 E-value=1.3e+02 Score=25.08 Aligned_cols=31 Identities=6% Similarity=0.021 Sum_probs=22.4
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCC
Q 024929 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDV 38 (260)
Q Consensus 8 e~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~ 38 (260)
+.+..+|.+..+.|+|++++.++.+++..+|
T Consensus 5 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p 35 (281)
T 2c2l_A 5 QELKEQGNRLFVGRKYPEAAACYGRAITRNP 35 (281)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 3456677777778888888888877776544
Done!