Query 024932
Match_columns 260
No_of_seqs 169 out of 1767
Neff 7.6
Searched_HMMs 46136
Date Fri Mar 29 08:35:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024932.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024932hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0698 Serine/threonine prote 100.0 2.7E-40 5.9E-45 301.5 20.3 186 58-260 42-246 (330)
2 KOG0697 Protein phosphatase 1B 100.0 2E-40 4.3E-45 285.9 14.2 188 52-260 18-233 (379)
3 PF00481 PP2C: Protein phospha 100.0 2.3E-40 5.1E-45 291.4 14.7 186 57-260 1-204 (254)
4 PLN03145 Protein phosphatase 2 100.0 3.6E-38 7.8E-43 290.1 21.1 189 54-260 63-272 (365)
5 PTZ00224 protein phosphatase 2 100.0 3.9E-35 8.4E-40 271.0 20.8 172 52-252 18-206 (381)
6 KOG0699 Serine/threonine prote 100.0 6.4E-36 1.4E-40 266.0 9.9 103 141-260 329-439 (542)
7 KOG0700 Protein phosphatase 2C 100.0 1.3E-32 2.8E-37 249.2 14.9 173 71-260 86-333 (390)
8 COG0631 PTC1 Serine/threonine 99.9 2E-27 4.3E-32 210.5 13.4 166 53-248 5-189 (262)
9 smart00332 PP2Cc Serine/threon 99.9 3.2E-25 6.9E-30 193.4 21.4 178 55-256 5-198 (255)
10 cd00143 PP2Cc Serine/threonine 99.9 5.7E-25 1.2E-29 191.1 20.5 173 57-252 2-191 (254)
11 PRK14559 putative protein seri 99.9 1.5E-23 3.3E-28 204.2 16.3 168 54-248 373-567 (645)
12 KOG1323 Serine/threonine phosp 99.9 5.6E-22 1.2E-26 175.5 13.3 149 86-252 140-400 (493)
13 KOG0618 Serine/threonine phosp 99.6 2.2E-15 4.8E-20 148.5 9.0 217 17-260 476-718 (1081)
14 PF13672 PP2C_2: Protein phosp 99.4 8.1E-12 1.7E-16 106.5 12.4 114 61-197 3-138 (212)
15 smart00331 PP2C_SIG Sigma fact 98.9 1.9E-08 4.2E-13 84.3 12.6 94 68-171 15-116 (193)
16 KOG1379 Serine/threonine prote 98.7 1.8E-07 3.9E-12 83.5 11.7 96 68-172 89-199 (330)
17 TIGR02865 spore_II_E stage II 97.5 0.00099 2.1E-08 67.6 12.3 120 53-198 549-678 (764)
18 PF07228 SpoIIE: Stage II spor 96.9 0.025 5.3E-07 46.9 12.4 80 90-172 4-92 (193)
19 PLN02388 phosphopantetheine ad 22.0 61 0.0013 27.1 1.8 18 87-104 19-37 (177)
20 PF05785 CNF1: Rho-activating 21.8 1E+02 0.0022 27.7 3.3 25 139-164 129-153 (281)
No 1
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-40 Score=301.54 Aligned_cols=186 Identities=37% Similarity=0.526 Sum_probs=160.0
Q ss_pred EEEeccCCCCCCCCCeEEEecCCCCCCCCCC-ceeEEEEecCCCChHHHHHHHHHHHHHHHHccC-------------ch
Q 024932 58 ADAAEDKGSRHTMEDASVVLVDASSDSPPNL-RCAHFAIFDGHGGRLAAEYAQKRLHANVISAGL-------------PR 123 (260)
Q Consensus 58 ~g~~s~~G~R~~nED~~~~~~~~~~~~~~~~-~~~lfgVfDGHGG~~aa~~~~~~l~~~l~~~~~-------------~~ 123 (260)
.+.++.+|+|+.|||++....++........ ...||||||||||+.||+|++++|+..|.++.. ..
T Consensus 42 ~~~~~~~~~r~~med~~~~~~~~~~~~~~~~~~~~ffgVfDGHGG~~~A~~~~~~L~~~l~~~~~~~~~~~~~~~a~~~~ 121 (330)
T KOG0698|consen 42 GSLLSIRGRRRKMEDRHVQLPDFLEEDVGGEQDTAFFGVFDGHGGDLAAKFAAKHLHKNLLEQLAFPKDRQDVKDALRRA 121 (330)
T ss_pred eEEEecCCCCCccCcceeecccccccccCCCCceEEEEEEeCCCCHHHHHHHHHHHHHHHHhhhhcccchHHHHHHHHHH
Confidence 5667999999999999999877654333333 689999999999999999999999999986522 12
Q ss_pred HH-HHHHHHHhhhhcCCcCCCCceEEEEEeCC-eEEEEEeCCceeEEEecccCCCCCCCccccCceeEEEcCCCCCCCCH
Q 024932 124 FR-KTDESLLQESVSGGWQDGATAVCIWILGR-TVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYP 201 (260)
Q Consensus 124 f~-~~d~~l~~~~~~~~~~~GsTa~v~~i~~~-~l~vanvGDSravl~~~~~~~g~~~~~~~~~~~~~~~LT~dH~p~~~ 201 (260)
|. ++|.+++.. ......+|||++++++.++ +|||||+||||||||+++ | .+++||.||+|.++
T Consensus 122 F~~~~D~~~~~~-~~~~~~~gstav~~vi~~~~~l~vaN~GDSRaVl~~~~---~-----------~a~~Ls~DHkP~~~ 186 (330)
T KOG0698|consen 122 FLTKTDSEFLEK-REDNRSGGSTAVVALIKKGRKLYVANVGDSRAVLSRKG---G-----------VAVQLSVDHKPDRE 186 (330)
T ss_pred HHHHHHHHHHhh-ccCCCCCcceeeeeeEecCCEEEEEEcCCCcEEEecCC---C-----------eeeeCCCCCCCCcH
Confidence 88 699999876 2224678999999888855 999999999999999875 2 79999999999999
Q ss_pred HHHHHHHHcCCEEeeC---CcccCceeccccccCCCCcCCceeeeceEeeEEEeeCCCCCCC
Q 024932 202 QERARIQKSGGTVSSN---GRLQGRLEVSRAFGDRQFKKGHCISFYSATKIWCCCNARHSFL 260 (260)
Q Consensus 202 ~E~~RI~~~gG~v~~~---~rv~g~l~~sRalGD~~~K~~gv~~~P~i~~~~~~~~~~~~fl 260 (260)
+|+.||+++||+|... +||+|.||+||+|||+.+|.++|+++|||+. ..++.+|+||
T Consensus 187 ~E~~RI~~~GG~v~~~~~~~Rv~G~LavsRa~GD~~~k~~~v~a~Pei~~--~~~~~~deFL 246 (330)
T KOG0698|consen 187 DERERIEAAGGRVSNWGGVWRVNGVLAVSRAFGDVELKSQGVIAEPEIQQ--VKINSDDEFL 246 (330)
T ss_pred HHHHHHHHcCCEEEEcCCcceEeceEEEeeecCCHHhcCCcEecCCceEE--EEcCCCCcEE
Confidence 9999999999999964 4999999999999999999889999999996 8888889986
No 2
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms]
Probab=100.00 E-value=2e-40 Score=285.95 Aligned_cols=188 Identities=30% Similarity=0.460 Sum_probs=157.9
Q ss_pred ceeeEEEEEeccCCCCCCCCCeEEEecCCCCCCCCCCceeEEEEecCCCChHHHHHHHHHHHHHHHHcc--Cc-------
Q 024932 52 DFVEIEADAAEDKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAG--LP------- 122 (260)
Q Consensus 52 ~~~~~~~g~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~lfgVfDGHGG~~aa~~~~~~l~~~l~~~~--~~------- 122 (260)
....++||..|+||||..|||++.....+.. +-.+|+||||||||.|+++|++|+++|...|.... ..
T Consensus 18 ~GNglryg~SSMQGWR~eMEDah~A~~~l~~---~l~dWSfFAVfDGHAGs~va~~c~~hLlehi~sse~F~~~~k~gsv 94 (379)
T KOG0697|consen 18 EGNGLRYGVSSMQGWRVEMEDAHTAVAGLPS---PLEDWSFFAVFDGHAGSQVANHCAEHLLEHIISSEEFRGMTKNGSV 94 (379)
T ss_pred cCCceeeeeccccchhhhhhhhhhhhhcCCC---CccCceEEEEEcCccchHHHHHHHHHHHHHhhhhHHHhhhccCCcH
Confidence 4467899999999999999999988765543 44578999999999999999999999998886531 10
Q ss_pred ---------hHHHHHHHHHhhh--hcCCcCCCCceEEEEEeCCeEEEEEeCCceeEEEecccCCCCCCCccccCceeEEE
Q 024932 123 ---------RFRKTDESLLQES--VSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIV 191 (260)
Q Consensus 123 ---------~f~~~d~~l~~~~--~~~~~~~GsTa~v~~i~~~~l~vanvGDSravl~~~~~~~g~~~~~~~~~~~~~~~ 191 (260)
.|+.+|+.+.... .....++||||+++++...++|++|+|||||||||++ .+..
T Consensus 95 ~~~~~GIrtGFL~iDE~mr~~~~~~~~~drsGsTAVcv~vsp~h~y~~NcGDSRavl~rng---------------~~~f 159 (379)
T KOG0697|consen 95 ENVEKGIRTGFLSIDEIMRTLSDISKGSDRSGSTAVCVFVSPTHIYIINCGDSRAVLCRNG---------------EVVF 159 (379)
T ss_pred HHHHhhHhhcceeHHHHHhhhhhhhcccccCCceEEEEEecCceEEEEecCcchhheecCC---------------ceEE
Confidence 1888887765544 3345579999999999999999999999999999999 9999
Q ss_pred cCCCCCCCCHHHHHHHHHcCCEEeeCCcccCceeccccccCCCCcCC--------ceeeeceEeeEEEeeCCCCCCC
Q 024932 192 VTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKG--------HCISFYSATKIWCCCNARHSFL 260 (260)
Q Consensus 192 LT~dH~p~~~~E~~RI~~~gG~v~~~~rv~g~l~~sRalGD~~~K~~--------gv~~~P~i~~~~~~~~~~~~fl 260 (260)
-|.||+|.+|.|++||+.|||.|. ..||||.|||||||||++||.. -|+++|||.. ..-+..|+||
T Consensus 160 ~TqDHKP~~p~EkeRIqnAGGSVM-IqRvNGsLAVSRAlGDydyK~v~~kgp~eQlVSPEPev~~--~~R~eedeFi 233 (379)
T KOG0697|consen 160 STQDHKPYLPKEKERIQNAGGSVM-IQRVNGSLAVSRALGDYDYKNVPGKGPTEQLVSPEPEVYI--IERSEEDEFI 233 (379)
T ss_pred eccCCCCCChHHHHHHhcCCCeEE-EEEecceeeeehhccCcccccCCCCCchhcccCCCCceEE--eeccccCcEE
Confidence 999999999999999999999998 5699999999999999999842 3899999887 2333334464
No 3
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 2I0O_A 2POP_C 2POM_A 2J4O_A 2I44_B 3MQ3_A 3N3C_A 2PNQ_B 2P8E_A 2IQ1_A ....
Probab=100.00 E-value=2.3e-40 Score=291.38 Aligned_cols=186 Identities=38% Similarity=0.532 Sum_probs=148.4
Q ss_pred EEEEeccCCCCCCCCCeEEEecCCCCCCCCCCceeEEEEecCCCChHHHHHHHHHHHHHHHHcc----C--------chH
Q 024932 57 EADAAEDKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAG----L--------PRF 124 (260)
Q Consensus 57 ~~g~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~lfgVfDGHGG~~aa~~~~~~l~~~l~~~~----~--------~~f 124 (260)
.+|..+.+|+|.+|||++++..++... .......+|||||||||..+|+|++++|+..+.+.. . ..|
T Consensus 1 ~~~~~~~~g~r~~~eD~~~~~~~~~~~-~~~~~~~l~~V~DGhgG~~~a~~~~~~l~~~l~~~~~~~~~~~~~~al~~a~ 79 (254)
T PF00481_consen 1 DYGVSSMQGVRKEMEDRHLIIQNFNSN-SGNDNVSLFGVFDGHGGSEAAEYASQNLPEFLKENLSFNDGNDIEEALRQAF 79 (254)
T ss_dssp EEEEEEEECTSSSHHEEEEEEEEETCC-TTEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred CcCeecCCCCCCcccCEEEEecCcccc-CCCCCcEEEEEecCCCChhhHHHHHHHHHHHHHhhcccccccchhhccccee
Confidence 478999999999999999998765332 345678999999999999999999999997765431 1 117
Q ss_pred HH-HHHHHHhhhhc-CCcCCCCceEEEEEeCCeEEEEEeCCceeEEEecccCCCCCCCccccCceeEE-EcCCCCCCCCH
Q 024932 125 RK-TDESLLQESVS-GGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAI-VVTRVHKAIYP 201 (260)
Q Consensus 125 ~~-~d~~l~~~~~~-~~~~~GsTa~v~~i~~~~l~vanvGDSravl~~~~~~~g~~~~~~~~~~~~~~-~LT~dH~p~~~ 201 (260)
.. ++..+...... ....+||||++++|.+++||+||||||||||++.+ ... +||.||+|.++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vanvGDSravl~~~~---------------~~~~~Lt~dH~~~~~ 144 (254)
T PF00481_consen 80 LAFTDESLYSDSENNESSKSGSTATVALIDGNKLYVANVGDSRAVLCRNG---------------GIIKQLTRDHKPSNP 144 (254)
T ss_dssp HHHHHHHHHHHHHHHTHTTSEEEEEEEEEETTEEEEEEESS-EEEEEETT---------------EEEEESS---STTSH
T ss_pred eecccccccccccccccccccccccccccccceeEEEeeeeeeeeeeecc---------------ccccccccccccchh
Confidence 77 77777653222 45689999999999999999999999999999998 666 99999999999
Q ss_pred HHHHHHHHcCCEEeeCCcccCceeccccccCCCCcC---CceeeeceEeeEEEeeCCCCCCC
Q 024932 202 QERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKK---GHCISFYSATKIWCCCNARHSFL 260 (260)
Q Consensus 202 ~E~~RI~~~gG~v~~~~rv~g~l~~sRalGD~~~K~---~gv~~~P~i~~~~~~~~~~~~fl 260 (260)
.|++||+++||.|...+|++|.|++||+|||..+|+ ++|+++|+|.. +.+... |.||
T Consensus 145 ~E~~RI~~~gg~v~~~~rv~g~l~~sRalGd~~~k~~~~~~v~~~P~i~~-~~l~~~-d~fl 204 (254)
T PF00481_consen 145 DERERIRKAGGRVSENGRVNGVLAVSRALGDFDLKPPGKPGVIAEPDISE-VDLTPD-DEFL 204 (254)
T ss_dssp HHHHHHHHTT-GEEETEEETTTBSSSB-EE-GGGTTCTSSSSB---EEEE-EEEBTT-EEEE
T ss_pred hccceeeccccccccchhhhhccccccccccccccccccceeeeeccccc-cccccc-ceEE
Confidence 999999999999988899999999999999999998 79999999998 555554 7775
No 4
>PLN03145 Protein phosphatase 2c; Provisional
Probab=100.00 E-value=3.6e-38 Score=290.10 Aligned_cols=189 Identities=33% Similarity=0.488 Sum_probs=155.6
Q ss_pred eeEEEEEeccCCCCCCCCCeEEEecCCCCC----CCCCCceeEEEEecCCCChHHHHHHHHHHHHHHHHccC--------
Q 024932 54 VEIEADAAEDKGSRHTMEDASVVLVDASSD----SPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGL-------- 121 (260)
Q Consensus 54 ~~~~~g~~s~~G~R~~nED~~~~~~~~~~~----~~~~~~~~lfgVfDGHGG~~aa~~~~~~l~~~l~~~~~-------- 121 (260)
..+.++..+++|.|+.|||++++..++... ........||||||||||+.+++|++++|++.|.+...
T Consensus 63 ~~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~~~~~~~~~a 142 (365)
T PLN03145 63 PVVRSGAWADIGSRSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDEDFPREIEKV 142 (365)
T ss_pred CceEEEEEccccCCCCCCCceEecccccccccccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhhccchhHHHH
Confidence 346789999999999999999886643211 11223468999999999999999999999998876421
Q ss_pred --chHHHHHHHHHhhhhcC-CcCCCCceEEEEEeCCeEEEEEeCCceeEEEecccCCCCCCCccccCceeEEEcCCCCCC
Q 024932 122 --PRFRKTDESLLQESVSG-GWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKA 198 (260)
Q Consensus 122 --~~f~~~d~~l~~~~~~~-~~~~GsTa~v~~i~~~~l~vanvGDSravl~~~~~~~g~~~~~~~~~~~~~~~LT~dH~p 198 (260)
..|..++.+|.+..... ...+|||+++++|.++++|||||||||||+++.+ ++++||+||+|
T Consensus 143 l~~af~~~d~~~~~~~~~~~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g---------------~~~~LT~DH~~ 207 (365)
T PLN03145 143 VSSAFLQTDTAFAEACSLDASLASGTTALAALVVGRSLVVANAGDCRAVLCRRG---------------KAIEMSRDHKP 207 (365)
T ss_pred HHHHHHHHhHHHHhhhccccCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCC---------------eEEEecCCCCC
Confidence 12888888887654332 3458999999999999999999999999999998 99999999999
Q ss_pred CCHHHHHHHHHcCCEEeeCCcccCceeccccccCCCCcCC------ceeeeceEeeEEEeeCCCCCCC
Q 024932 199 IYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKG------HCISFYSATKIWCCCNARHSFL 260 (260)
Q Consensus 199 ~~~~E~~RI~~~gG~v~~~~rv~g~l~~sRalGD~~~K~~------gv~~~P~i~~~~~~~~~~~~fl 260 (260)
.++.|++||+++||+|. ++|++|.+++||+|||+.+|.. +++++|+|.. + -++..|.||
T Consensus 208 ~~~~E~~RI~~~Gg~v~-~g~v~g~l~vTRalGD~~~k~~k~~~~~~vs~ePdv~~-~-~l~~~D~fL 272 (365)
T PLN03145 208 MCSKERKRIEASGGYVY-DGYLNGQLNVARALGDWHMEGMKGSDGGPLSAEPELMT-T-QLTEEDEFL 272 (365)
T ss_pred CCHHHHHHHHHcCCcee-cceECCccccccccccccccccccccCCCcceEEEEEE-E-ECCCCCEEE
Confidence 99999999999999997 6899999999999999988743 5899999988 3 344566664
No 5
>PTZ00224 protein phosphatase 2C; Provisional
Probab=100.00 E-value=3.9e-35 Score=271.04 Aligned_cols=172 Identities=31% Similarity=0.473 Sum_probs=144.5
Q ss_pred ceeeEEEEEeccCCCCCCCCCeEEEecCCCCCCCCCCceeEEEEecCCCChHHHHHHHHHHHHHHHHccCc--------h
Q 024932 52 DFVEIEADAAEDKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLP--------R 123 (260)
Q Consensus 52 ~~~~~~~g~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~lfgVfDGHGG~~aa~~~~~~l~~~l~~~~~~--------~ 123 (260)
....+.+|.++.+|.|++|||++++..+ ..+.||||||||||..||+|++++|+..+.+.... .
T Consensus 18 ~~~~~~~g~~s~~G~R~~nED~~~v~~~--------~~~~lfgVfDGHgG~~~S~~~~~~l~~~l~~~~~~~~~~~l~~a 89 (381)
T PTZ00224 18 GNSIFRCASACVNGYRESMEDAHLLYLT--------DDWGFFGVFDGHVNDECSQYLARAWPQALEKEPEPMTDERMEEL 89 (381)
T ss_pred CCccEEEEEEeCCCCCCCCCCeeEeccC--------CCceEEEEEeCCCcHHHHHHHHHHHHHHHHhccccccHHHHHHH
Confidence 4456789999999999999999887532 13469999999999999999999999887543221 2
Q ss_pred HHHHHHHHHhhhhcCCcCCCCceEEEEEe-CCeEEEEEeCCceeEEEecccCCCCCCCccccCceeEEEcCCCCCCCCHH
Q 024932 124 FRKTDESLLQESVSGGWQDGATAVCIWIL-GRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQ 202 (260)
Q Consensus 124 f~~~d~~l~~~~~~~~~~~GsTa~v~~i~-~~~l~vanvGDSravl~~~~~~~g~~~~~~~~~~~~~~~LT~dH~p~~~~ 202 (260)
|..++.++.+.. ..+|||+++++|. +.++|||||||||+|+++.+ ++++||+||+|.++.
T Consensus 90 ~~~~d~~i~~~~----~~~GsTatv~lI~~~~~l~vaNVGDSRayl~r~g---------------~~~~LT~DH~~~~~~ 150 (381)
T PTZ00224 90 CLEIDEEWMDSG----REGGSTGTFCVIMKDVHLQVGNVGDSRVLVCRDG---------------KLVFATEDHKPNNPG 150 (381)
T ss_pred HHHHHHHHHhcc----cCCCCeEEEEEEEECCEEEEEEcccceEEEEECC---------------EEEEcccCCCCCCHH
Confidence 777777776532 2569999988876 57999999999999999988 999999999999999
Q ss_pred HHHHHHHcCCEEeeCCcccCceeccccccCCCCcCCc--------eeeeceEeeEEEe
Q 024932 203 ERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKGH--------CISFYSATKIWCC 252 (260)
Q Consensus 203 E~~RI~~~gG~v~~~~rv~g~l~~sRalGD~~~K~~g--------v~~~P~i~~~~~~ 252 (260)
|+.||.++||.+. .+|++|.+++||+|||..+|.++ |+++|+|.. +.+
T Consensus 151 E~~RI~~~gg~v~-~~Rv~G~l~vTRalGd~~~K~~~~~~~~~~~v~~~Pdi~~-~~l 206 (381)
T PTZ00224 151 ERQRIEACGGRVV-SNRVDGDLAVSRAFGDRSFKVKGTGDYLEQKVIAVPDVTH-LTC 206 (381)
T ss_pred HHhHHHHccCEec-cccccCceeeecccCCcccccccccccccCcceeeeEEEE-EEC
Confidence 9999999999997 57999999999999998877543 789999988 443
No 6
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-36 Score=265.97 Aligned_cols=103 Identities=34% Similarity=0.539 Sum_probs=98.0
Q ss_pred CCCCceEEEEEeCCeEEEEEeCCceeEEEecccCCCCCCCccccCceeEEEcCCCCCCCCHHHHHHHHHcCCEEeeCCcc
Q 024932 141 QDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSNGRL 220 (260)
Q Consensus 141 ~~GsTa~v~~i~~~~l~vanvGDSravl~~~~~~~g~~~~~~~~~~~~~~~LT~dH~p~~~~E~~RI~~~gG~v~~~~rv 220 (260)
.+||||+||++.+++|||||+|||||||+|.| +++-||.||+|..+.|..||.++||.|..+|||
T Consensus 329 DSGtTAvVcLv~g~~liVANAGDSRcV~sr~G---------------kAvdmS~DHKPEDevE~~RI~~AGG~vtlDGRV 393 (542)
T KOG0699|consen 329 DSGTTAVVCLVGGDKLIVANAGDSRCVLSRNG---------------KAVDMSVDHKPEDEVETNRIHAAGGQVTLDGRV 393 (542)
T ss_pred CCCceEEEEEecCceEEEecCCCcceEEecCC---------------ceeecccCCCcccHHHHHHHHhcCCeEeeccee
Confidence 48999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred cCceeccccccCCCCcCC--------ceeeeceEeeEEEeeCCCCCCC
Q 024932 221 QGRLEVSRAFGDRQFKKG--------HCISFYSATKIWCCCNARHSFL 260 (260)
Q Consensus 221 ~g~l~~sRalGD~~~K~~--------gv~~~P~i~~~~~~~~~~~~fl 260 (260)
+|.|++||+|||..||++ -|++-|+|.. ..+++.|+|+
T Consensus 394 NGGLNLSRA~GDHaYK~N~~Lp~eEQMIsALPDiK~--l~lTpedEFm 439 (542)
T KOG0699|consen 394 NGGLNLSRAFGDHAYKKNQELPLEEQMISALPDIKI--LALTPEDEFM 439 (542)
T ss_pred cCccchhhhhhhhhhhcccCCChHHHHhhhccccee--EeecCcccEE
Confidence 999999999999999965 3789999999 8889999985
No 7
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-32 Score=249.17 Aligned_cols=173 Identities=29% Similarity=0.325 Sum_probs=139.6
Q ss_pred CCeEEEecCCCCCCCCCCceeEEEEecCCCChHHHHHHHHHHHHHHHHccCc----------------------------
Q 024932 71 EDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLP---------------------------- 122 (260)
Q Consensus 71 ED~~~~~~~~~~~~~~~~~~~lfgVfDGHGG~~aa~~~~~~l~~~l~~~~~~---------------------------- 122 (260)
||++.+... ...++.|+||||||||..|++|++++|+.++..++..
T Consensus 86 edrv~~~~s------~~~~~~fvGIyDGhgGp~as~~v~~~L~~~v~~~L~~~~~~~~~~f~~e~~~~~~~~~~~~~~~~ 159 (390)
T KOG0700|consen 86 EDRVSVAVS------EENGWLFVGIYDGHGGPDASRFLSDHLYPYVARELQGLLWQDEERFPSEYKSEELEHLLVYWKQL 159 (390)
T ss_pred cCcceeeee------ccCCeEEEEEecCCCCccHHHHHHHHHHHHHHHHhhhhhhhhccccccccccchhhhhhhhhhcc
Confidence 666555432 2446789999999999999999999999988722111
Q ss_pred ----------------hHHHHHHHHHhhhhcC------CcCCCCceEEEEEeCCeEEEEEeCCceeEEEecccCCCCCCC
Q 024932 123 ----------------RFRKTDESLLQESVSG------GWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNH 180 (260)
Q Consensus 123 ----------------~f~~~d~~l~~~~~~~------~~~~GsTa~v~~i~~~~l~vanvGDSravl~~~~~~~g~~~~ 180 (260)
.|.+++++|++..... --.+|||+++.+|++..|||||+|||||||++..+
T Consensus 160 ~~~~~~~~~v~~al~~Af~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~~i~~~~LyVaN~GDSRAVLG~~~~------- 232 (390)
T KOG0700|consen 160 SSADQRHGDVLEALSKAFEATEEDFLEMVDKQLQENPELALVGSCCLVGLIKGGDLYVANVGDSRAVLGVVEN------- 232 (390)
T ss_pred cccCccchhHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhcceEEEEEEeCCeEEEEecCcchhhhceecC-------
Confidence 1899999988766331 12479999999999999999999999999988762
Q ss_pred ccccCceeEEEcCCCCCCCCHHHHHHHHHcCC-----EEeeCCcccCceeccccccCCCCc-------------------
Q 024932 181 LDELSSLKAIVVTRVHKAIYPQERARIQKSGG-----TVSSNGRLQGRLEVSRAFGDRQFK------------------- 236 (260)
Q Consensus 181 ~~~~~~~~~~~LT~dH~p~~~~E~~RI~~~gG-----~v~~~~rv~g~l~~sRalGD~~~K------------------- 236 (260)
.+..|.+.|||.||+..+++|+.||+..+. .|...|||.|.|.+||||||.+||
T Consensus 233 --~~~~~~A~qLS~dHn~~ne~Ev~Rir~eHPdd~~~vv~~~~RvkG~L~vsRAfGd~~lK~~~~n~e~l~~~fr~~~~~ 310 (390)
T KOG0700|consen 233 --NGSWLVAVQLSTDHNASNEDEVRRIRSEHPDDPHIVVNKHWRVKGILQVSRAFGDGYLKWPEFNQEPLLEKFRIPYIG 310 (390)
T ss_pred --CCCeEEEEecChhhccccHHHHHHHHHhCCCCcceEeeccceeeEEEEeeeeccceeecchhhccchhHhhcCCCCCC
Confidence 123379999999999999999999999985 232346999999999999999998
Q ss_pred -CCceeeeceEeeEEEeeCCCCCCC
Q 024932 237 -KGHCISFYSATKIWCCCNARHSFL 260 (260)
Q Consensus 237 -~~gv~~~P~i~~~~~~~~~~~~fl 260 (260)
+|-|+|+|+|+. ..+..+|.||
T Consensus 311 t~PyltaeP~i~~--HrL~p~DkFL 333 (390)
T KOG0700|consen 311 TPPYLTAEPSITH--HKLTPNDKFL 333 (390)
T ss_pred CCCceeccceEEE--EEcCCCCeEE
Confidence 345899999999 7777889986
No 8
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.95 E-value=2e-27 Score=210.47 Aligned_cols=166 Identities=27% Similarity=0.316 Sum_probs=131.8
Q ss_pred eeeEEEEEeccCC-CCCCCCCeEEEecCCCCCCCCCCceeEEEEecCCCChHHHHHHHHHHHHHHHHccCc---------
Q 024932 53 FVEIEADAAEDKG-SRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLP--------- 122 (260)
Q Consensus 53 ~~~~~~g~~s~~G-~R~~nED~~~~~~~~~~~~~~~~~~~lfgVfDGHGG~~aa~~~~~~l~~~l~~~~~~--------- 122 (260)
.+.+.++..++.| .|..|||++.+..+. .+.. ..||+|||||||+++++++++.+.+.|.+....
T Consensus 5 ~~~~~~~~~s~~g~~R~~NeD~~~~~~~~----~~~~-~~l~~V~DG~GGh~~ge~aS~~~v~~l~~~~~~~~~~~~~~~ 79 (262)
T COG0631 5 ILSLKVAGLSDVGTVRKHNEDAFLIKPNE----NGNL-LLLFAVADGMGGHAAGEVASKLAVEALARLFDETNFNSLNES 79 (262)
T ss_pred cceeeeeeeccCCCccCCCCcceeecccc----CCcc-eeEEEEEeCccchhHHHHHHHHHHHHHHHHHHhccccccchh
Confidence 3456667777777 578899999987632 1223 579999999999999999999999888665211
Q ss_pred --h-----HHHHHHHHHhhhh--cCCcCCCCceEEEEEeCCeEEEEEeCCceeEEEecccCCCCCCCccccCceeEEEcC
Q 024932 123 --R-----FRKTDESLLQESV--SGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVT 193 (260)
Q Consensus 123 --~-----f~~~d~~l~~~~~--~~~~~~GsTa~v~~i~~~~l~vanvGDSravl~~~~~~~g~~~~~~~~~~~~~~~LT 193 (260)
. +..++..+..... .....+|||++++++.++++|+|||||||+|+++++ .++|||
T Consensus 80 ~~~~l~~~~~~~n~~i~~~~~~~~~~~~mgtTl~~~~~~~~~l~~a~vGDSR~yl~~~~---------------~~~~lT 144 (262)
T COG0631 80 LEELLKEAILKANEAIAEEGQLNEDVRGMGTTLVLLLIRGNKLYVANVGDSRAYLLRDG---------------ELKQLT 144 (262)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcccccCCCceeEEEEEEECCeEEEEEccCCeEEEEcCC---------------ceEEec
Confidence 1 5666666666543 233567999999999999999999999999999999 999999
Q ss_pred CCCCCCCHHHHHHHHHcCCEEeeCCcccCceeccccccCCCCcCCceeeeceEee
Q 024932 194 RVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKGHCISFYSATK 248 (260)
Q Consensus 194 ~dH~p~~~~E~~RI~~~gG~v~~~~rv~g~l~~sRalGD~~~K~~gv~~~P~i~~ 248 (260)
.||++.+..|+.|+...++... .+|.+ ++||+||+... ..|+++.
T Consensus 145 ~DH~~~~~~~~~~~~~~~~~~~-~~~~~---~ltralG~~~~------~~p~~~~ 189 (262)
T COG0631 145 EDHSLVNRLEQRGIITPEEARS-HPRRN---ALTRALGDFDL------LEPDITE 189 (262)
T ss_pred cCCcHHHHHHHhcCCCHHHHHh-Cccch---hhhhhcCCCcc------cceeEEE
Confidence 9999999999999877776665 34554 89999999987 6677666
No 9
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain. The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=99.94 E-value=3.2e-25 Score=193.43 Aligned_cols=178 Identities=38% Similarity=0.486 Sum_probs=144.6
Q ss_pred eEEEEEeccCCCCCCCCCeEEEecCCCCCCCCCCceeEEEEecCCCChHHHHHHHHHHHHHHHHccC--------c----
Q 024932 55 EIEADAAEDKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGL--------P---- 122 (260)
Q Consensus 55 ~~~~g~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~lfgVfDGHGG~~aa~~~~~~l~~~l~~~~~--------~---- 122 (260)
.+.++..+.+|.|..|||++++..+. ..+..+|+|||||||..+|+++++.+...+.+... .
T Consensus 5 ~~~~~~~~~~~~r~~neD~~~~~~~~------~~~~~~~~v~DG~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 78 (255)
T smart00332 5 GLRYGLSSMQGVRKPMEDAHVITPDL------SDSGAFFGVFDGHGGSEAAKFLSKNLPEILAEELIKHKDELEDVEEAL 78 (255)
T ss_pred ceeEEEecCCCCCCCCcceEEEeccC------CCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHhHhhcccchhHHHHHH
Confidence 35567778889999999999886532 13468999999999999999999999988866421 0
Q ss_pred --hHHHHHHHHHhhhhcC--CcCCCCceEEEEEeCCeEEEEEeCCceeEEEecccCCCCCCCccccCceeEEEcCCCCCC
Q 024932 123 --RFRKTDESLLQESVSG--GWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKA 198 (260)
Q Consensus 123 --~f~~~d~~l~~~~~~~--~~~~GsTa~v~~i~~~~l~vanvGDSravl~~~~~~~g~~~~~~~~~~~~~~~LT~dH~p 198 (260)
.|..++..+....... ...+|||++++++..+++|++|+||||+|+++.+ ...+||.||++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~y~~~~~---------------~~~~lt~dh~~ 143 (255)
T smart00332 79 RKAFLKTDEEILEELESLEEDAGSGSTAVVALISGNKLYVANVGDSRAVLCRNG---------------KAVQLTEDHKP 143 (255)
T ss_pred HHHHHHHHHHHHHhhhhccCCCCCCccEEEEEEECCEEEEEeccCceEEEEeCC---------------ceeEcCCCCCC
Confidence 1555555555443322 2457999999999999999999999999999988 88999999999
Q ss_pred CCHHHHHHHHHcCCEEeeCCcccCceeccccccCCCCcCCceeeeceEeeEEEeeCCC
Q 024932 199 IYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKGHCISFYSATKIWCCCNAR 256 (260)
Q Consensus 199 ~~~~E~~RI~~~gG~v~~~~rv~g~l~~sRalGD~~~K~~gv~~~P~i~~~~~~~~~~ 256 (260)
.++.|..||...++.+. .++.++...+||++|+..+| +.++++|++.. +.++...
T Consensus 144 ~~~~~~~~i~~~~~~~~-~~~~~~~~~lt~~~g~~~~~-~~i~~~p~~~~-~~~~~~~ 198 (255)
T smart00332 144 SNEDERARIEAAGGFVI-NGRVNGVLALSRAIGDFFLK-PYVSAEPDVTV-VELTEKD 198 (255)
T ss_pred cCHHHHHHHHHcCCEEE-CCeECCeEecccccCCHhhc-CCeEeeeEEEE-EEecCCC
Confidence 99999999999999986 56888889999999999886 56999999987 5543333
No 10
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=99.94 E-value=5.7e-25 Score=191.11 Aligned_cols=173 Identities=37% Similarity=0.558 Sum_probs=141.8
Q ss_pred EEEEeccCCCCCCCCCeEEEecCCCCCCCCCCceeEEEEecCCCChHHHHHHHHHHHHHHHHccCc--------------
Q 024932 57 EADAAEDKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLP-------------- 122 (260)
Q Consensus 57 ~~g~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~lfgVfDGHGG~~aa~~~~~~l~~~l~~~~~~-------------- 122 (260)
.++..+..|.|+.|||++.+...... .+..+|+|+|||||...++++++.+.+.+.+....
T Consensus 2 ~~~~~~~~g~r~~neD~~~~~~~~~~-----~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~ 76 (254)
T cd00143 2 SAGVSDKGGDRKTNEDAVVIKPNLNN-----EDGGLFGVFDGHGGHAAGEFASKLLVEELLEELEETLTLSEEDIEEALR 76 (254)
T ss_pred ceeeecCCCCCCCCcceEEEeccCCC-----CCcEEEEEEcCCChHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHH
Confidence 36778888899999999998653210 24589999999999999999999888887654221
Q ss_pred -hHHHHHHHHHhhhhc--CCcCCCCceEEEEEeCCeEEEEEeCCceeEEEecccCCCCCCCccccCceeEEEcCCCCCCC
Q 024932 123 -RFRKTDESLLQESVS--GGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAI 199 (260)
Q Consensus 123 -~f~~~d~~l~~~~~~--~~~~~GsTa~v~~i~~~~l~vanvGDSravl~~~~~~~g~~~~~~~~~~~~~~~LT~dH~p~ 199 (260)
.|..++..+...... ....+|||++++++..++++++|+||||+|+++.+ ..++||.||++.
T Consensus 77 ~~~~~~~~~l~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~~~~~~~---------------~~~~lt~dh~~~ 141 (254)
T cd00143 77 KAFLRADEEILEEAQDEPDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNG---------------EAVQLTKDHKPV 141 (254)
T ss_pred HHHHHHHHHHHHhhhhccCCCCCCCcEEEEEEECCEEEEEEecCcEEEEEcCC---------------ceeEcCCCCCCc
Confidence 166666666554432 33567999999999999999999999999999998 999999999999
Q ss_pred CHHHHHHHHHcCCEEeeCCcccCceeccccccCCCCcCCceeeeceEeeEEEe
Q 024932 200 YPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKGHCISFYSATKIWCC 252 (260)
Q Consensus 200 ~~~E~~RI~~~gG~v~~~~rv~g~l~~sRalGD~~~K~~gv~~~P~i~~~~~~ 252 (260)
++.|+.||...+|++. ..+.++...+||+||+..+| +++.++|++.. +.+
T Consensus 142 ~~~~~~~i~~~~~~~~-~~~~~~~~~~t~~lG~~~~~-~~~~~~~~~~~-~~l 191 (254)
T cd00143 142 NEEERERIEKAGGRVS-NGRVPGVLAVTRALGDFDLK-PGVSAEPDVTV-VKL 191 (254)
T ss_pred ChHHHHHHHHcCCcEE-eCEEcCceeeccccCCcccc-CCEEcCCeEEE-EEe
Confidence 9999999999999886 56778889999999999997 66899999887 444
No 11
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=99.91 E-value=1.5e-23 Score=204.23 Aligned_cols=168 Identities=20% Similarity=0.202 Sum_probs=116.4
Q ss_pred eeEEEEEeccCCC-CCCCCCeEEEecCCCCCC-CC---CCceeEEEEecCCCChH----HHHHHHHHHHHHHHHccC---
Q 024932 54 VEIEADAAEDKGS-RHTMEDASVVLVDASSDS-PP---NLRCAHFAIFDGHGGRL----AAEYAQKRLHANVISAGL--- 121 (260)
Q Consensus 54 ~~~~~g~~s~~G~-R~~nED~~~~~~~~~~~~-~~---~~~~~lfgVfDGHGG~~----aa~~~~~~l~~~l~~~~~--- 121 (260)
+.+.++..+++|. |+.|||++.+..++.... +. .....+|+|||||||+. ||+++.+.|.+.+.+...
T Consensus 373 ~~l~~a~~Td~G~~R~~NEDa~~i~~~~~~~~~~~~~~~~~~~L~aVaDGmGGh~~GevAS~lAv~~L~~~~~~~~~~~~ 452 (645)
T PRK14559 373 VSLEDAGRTDVGRQRHHNEDYFGINTRIQKLENPHGRIVQARGLYILCDGMGGHAAGEVASALAVETLQQYFQQHWQDEL 452 (645)
T ss_pred eeEEEEEECCCCCCCcccCCcccccccccccccccccccccceEEEEEeCCCCchhHHHHHHHHHHHHHHHHHhhhcccc
Confidence 4588899999995 899999987754321100 01 11346899999999776 566667777666543311
Q ss_pred -------chHHHHHHHHHhhhhc----CCcCCCCceEEEEEeCCeEEEEEeCCceeEEEe-cccCCCCCCCccccCceeE
Q 024932 122 -------PRFRKTDESLLQESVS----GGWQDGATAVCIWILGRTVFVANIGDAKAVVAR-SSIVDGSNNHLDELSSLKA 189 (260)
Q Consensus 122 -------~~f~~~d~~l~~~~~~----~~~~~GsTa~v~~i~~~~l~vanvGDSravl~~-~~~~~g~~~~~~~~~~~~~ 189 (260)
..|..++..+.+.... ....+|||++++++.++++|++||||||+|+++ ++ .+
T Consensus 453 ~~~~~L~~ai~~AN~~I~~~~~~~~~~~~~~MGTTlv~alI~~~~l~ianVGDSRaYli~r~g---------------~l 517 (645)
T PRK14559 453 PDEETIREAIYLANEAIYDLNQQNARSGSGRMGTTLVMALVQDTQVAVAHVGDSRLYRVTRKG---------------GL 517 (645)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCceeeeEEEECCEEEEEEecCceEEEEecCC---------------eE
Confidence 1166777777654322 223589999999999999999999999999885 55 89
Q ss_pred EEcCCCCCCCCHHHHHHHHHcCCEEee---CCcccCceeccccccCCCCcCCceeeeceEee
Q 024932 190 IVVTRVHKAIYPQERARIQKSGGTVSS---NGRLQGRLEVSRAFGDRQFKKGHCISFYSATK 248 (260)
Q Consensus 190 ~~LT~dH~p~~~~E~~RI~~~gG~v~~---~~rv~g~l~~sRalGD~~~K~~gv~~~P~i~~ 248 (260)
.+||+||++... +.+.| +.. ..| ++..++||+||+...+. .+|+|..
T Consensus 518 ~QLT~DHs~~~~-----lv~~G--i~~~~a~~~-p~~~~LTrALG~~~~~~----l~Pdi~~ 567 (645)
T PRK14559 518 EQLTVDHEVGQR-----EIQRG--VEPQIAYAR-PDAYQLTQALGPRDNSA----IQPDIQF 567 (645)
T ss_pred EEeCCCCCHHHH-----HHHhC--CCHHHHhcC-cccceeeeccCCCCCCc----ccceEEE
Confidence 999999998632 22333 221 123 34578999999976543 3788766
No 12
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms]
Probab=99.88 E-value=5.6e-22 Score=175.55 Aligned_cols=149 Identities=28% Similarity=0.396 Sum_probs=122.4
Q ss_pred CCCceeEEEEecCCCChHHHHHHHHHHHHHHHHccCch------------------------------------------
Q 024932 86 PNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLPR------------------------------------------ 123 (260)
Q Consensus 86 ~~~~~~lfgVfDGHGG~~aa~~~~~~l~~~l~~~~~~~------------------------------------------ 123 (260)
...++.+|.+||||.|..+|-.+++.++..|.+.+...
T Consensus 140 ~~~~~~~~slfdghags~~avvAsrll~~hI~~ql~~vvd~i~~~~~~~~~~~g~~~~~s~~s~~~~~~~~ek~Ir~E~L 219 (493)
T KOG1323|consen 140 PRADGALFSLFDGHAGSAVAVVASRLLHRHIKEQLCEVVDTILHMDRHENLNFGKHRSESSYSMSEMSREDEKRIRHEHL 219 (493)
T ss_pred CCCcceeeeeecCCCcchHHHHHHHHHHHhhhHHHHHHHHHHhhhccccccccccccccCCcccccccchhhccCchHHh
Confidence 34578999999999999999999888887774431100
Q ss_pred --------HHHHHHHHHhhhhcCCcCCCCceEEEEEeCCeEEEEEeCCceeEEEecccCCCCCCCccccCceeEEEcCCC
Q 024932 124 --------FRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRV 195 (260)
Q Consensus 124 --------f~~~d~~l~~~~~~~~~~~GsTa~v~~i~~~~l~vanvGDSravl~~~~~~~g~~~~~~~~~~~~~~~LT~d 195 (260)
|+.+|..+......-....||||++++..-.+||+||+|||||||.+++ .+.+||.+
T Consensus 220 ViGAlEsAFqemDeqiarer~~~~~~GGCtalvvi~llGKlYvaNAGDsRAIlVrnd---------------eirplS~e 284 (493)
T KOG1323|consen 220 VIGALESAFQEMDEQIARERQVWRLPGGCTALVVIVLLGKLYVANAGDSRAILVRND---------------EIRPLSKE 284 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEEeeeeccceEEccCCCceEEEEecC---------------Ceeecccc
Confidence 9999999988777666778999999999999999999999999999999 99999999
Q ss_pred CCCCCHHHHHHHHHcC--------C-----------------------------EEee-----------------CCccc
Q 024932 196 HKAIYPQERARIQKSG--------G-----------------------------TVSS-----------------NGRLQ 221 (260)
Q Consensus 196 H~p~~~~E~~RI~~~g--------G-----------------------------~v~~-----------------~~rv~ 221 (260)
.+|. .||+||+..+ + |-.. +.|+.
T Consensus 285 fTPe--tERqRlQ~Laf~~PeLlgneFtrLEfprRl~~~dLgqrvLyRD~~MtGWayKtve~~DLr~pLI~gegrkaRll 362 (493)
T KOG1323|consen 285 FTPE--TERQRLQELAFRNPELLGNEFTRLEFPRRLTIKDLGQRVLYRDWNMTGWAYKTVEEEDLRFPLISGEGRKARLL 362 (493)
T ss_pred cCcH--HHHHHHHHHhhcChHhhcccccceecccccChhhhcceeeeeccccccceeehhhhhcCCcceecccchhhhhh
Confidence 9997 8999999874 1 1110 01677
Q ss_pred CceeccccccCCCCc--------CCceeeeceEeeEEEe
Q 024932 222 GRLEVSRAFGDRQFK--------KGHCISFYSATKIWCC 252 (260)
Q Consensus 222 g~l~~sRalGD~~~K--------~~gv~~~P~i~~~~~~ 252 (260)
+.+.|||.|||.++| +|-++|.|+|+. +.+
T Consensus 363 ~TigVsRGlGDH~Lkv~dsnl~iKPFLssvPeV~V-~dl 400 (493)
T KOG1323|consen 363 ATIGVSRGLGDHHLKVVDSNLSIKPFLSSVPEVRV-YDL 400 (493)
T ss_pred hhheeccccCcceeeeecCCcccchhhhcCCeeEE-Eeh
Confidence 889999999999987 456899999988 443
No 13
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.60 E-value=2.2e-15 Score=148.54 Aligned_cols=217 Identities=20% Similarity=0.237 Sum_probs=162.8
Q ss_pred CCCCCcchhhcccccccccccHH--HHHHhhhccc-----ccceeeEEEEEeccCCCCCCCCCeEEEecCCCCCCCCCCc
Q 024932 17 GDFDDFNLIAKKSKIEKVNENEE--EAARAQIMHK-----QIDFVEIEADAAEDKGSRHTMEDASVVLVDASSDSPPNLR 89 (260)
Q Consensus 17 ~~l~~~nl~~~~~~~~~~~~~~~--~~~~~~~~~~-----~~~~~~~~~g~~s~~G~R~~nED~~~~~~~~~~~~~~~~~ 89 (260)
|.|+..|+..+........-.+. ......+..+ ....+...+|++...|.|.++.-+...+.++. .+ .
T Consensus 476 p~LkyLdlSGN~~l~~d~~~l~~l~~l~~~~i~~~~~~d~~~n~~~~t~Gv~~~~gqrnk~c~~~~~v~nf~----~~-~ 550 (1081)
T KOG0618|consen 476 PNLKYLDLSGNTRLVFDHKTLKVLKSLSQMDITLNNTPDGNVNAFLWTYGVAGVSGQRNKVCSRAVWVENFF----LN-P 550 (1081)
T ss_pred cccceeeccCCcccccchhhhHHhhhhhheecccCCCCccccceeheeeccchhcccccchhhhhhhhhhcc----cC-C
Confidence 77777887777642221111111 1112222222 23456677999999999999888877766542 22 2
Q ss_pred eeEEEEecCCCChHHHHHHHHHHHHHHHHccCc----------hHHHHHHHHHhhhhcCCcCCCCceEEEEEeCC-----
Q 024932 90 CAHFAIFDGHGGRLAAEYAQKRLHANVISAGLP----------RFRKTDESLLQESVSGGWQDGATAVCIWILGR----- 154 (260)
Q Consensus 90 ~~lfgVfDGHGG~~aa~~~~~~l~~~l~~~~~~----------~f~~~d~~l~~~~~~~~~~~GsTa~v~~i~~~----- 154 (260)
...||.|||-+...+..+++..+.+++.++... .|+.+++++-. .+...|..++.+.|..+
T Consensus 551 ~a~~g~~dgs~n~~v~~~vq~~ma~~L~eev~~~~~et~~mr~~fl~~~rklg~----~g~~lg~~~~~~~i~~d~~~~a 626 (1081)
T KOG0618|consen 551 QATFGCFDGSRNSRVLSLVQDTMASYLAEEVQLYGNETEQMRNTFLRLNRKLGE----EGQVLGGSVVLCQIVEDSLSPA 626 (1081)
T ss_pred cceEEEEcCCCchhHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHhhhhhh----hhccccchhhheeecccccCcc
Confidence 368999999999999999999999999776322 16777766633 23345666666766543
Q ss_pred ---eEEEEEeCCceeEEEecccCCCCCCCccccCceeEEEcCCCC-CCCCHHHHHHHHHcCCEEeeCCcccCceeccccc
Q 024932 155 ---TVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVH-KAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAF 230 (260)
Q Consensus 155 ---~l~vanvGDSravl~~~~~~~g~~~~~~~~~~~~~~~LT~dH-~p~~~~E~~RI~~~gG~v~~~~rv~g~l~~sRal 230 (260)
++.+||+|+|.+|+|+.+ +..++|+-. ...+++|.+||...+|+|..+++++|+...||++
T Consensus 627 sS~~l~~Anvg~c~avls~ng---------------~~~p~t~~~~~~v~~eE~~RI~~~~g~i~ed~k~ngvt~~tR~i 691 (1081)
T KOG0618|consen 627 SSKTLFAANVGTCMAVLSRNG---------------KPLPTTRSPMLEVDREEYKRIVDSKGFITEDNKLNGVTSSTRAI 691 (1081)
T ss_pred cchhhhHhhhccchhhhhhcC---------------CcCcccccccccCCHHHHHHHHHhcCeecCCCeeeceeeeeeec
Confidence 789999999999999999 888887754 5569999999999999999999999999999999
Q ss_pred cCCCCcCCceeeeceEeeEEEeeCCCCCCC
Q 024932 231 GDRQFKKGHCISFYSATKIWCCCNARHSFL 260 (260)
Q Consensus 231 GD~~~K~~gv~~~P~i~~~~~~~~~~~~fl 260 (260)
|.+.+ .|+|.+.|+|.+ ..++..|+||
T Consensus 692 G~~~l-~P~v~p~Phv~~--~~Lt~qdE~L 718 (1081)
T KOG0618|consen 692 GPFSL-FPHVLPDPHVSV--VILTEQDEFL 718 (1081)
T ss_pred ccccc-cccccCCCceee--EecccCceEE
Confidence 99998 568999999999 8888888886
No 14
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B ....
Probab=99.37 E-value=8.1e-12 Score=106.47 Aligned_cols=114 Identities=23% Similarity=0.233 Sum_probs=68.8
Q ss_pred eccCCCCCCCCCeEEEecCCCCCCCCCCceeEEEEecCCC----ChHHHHHHHHHHHHHHHHccCch--------HHHHH
Q 024932 61 AEDKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHG----GRLAAEYAQKRLHANVISAGLPR--------FRKTD 128 (260)
Q Consensus 61 ~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~lfgVfDGHG----G~~aa~~~~~~l~~~l~~~~~~~--------f~~~d 128 (260)
.+++|.+..|||++.+.... +..+++|+||+| |+.+|..+.+.+.+.+.+..... +..+.
T Consensus 3 ~sh~~~~~~nqD~~~~~~~~--------~~~~~aVaDG~g~~~~~~~aa~~av~~~~~~l~~~~~~~~~~~~~~~~~~~~ 74 (212)
T PF13672_consen 3 RSHRGRGAPNQDAFGIRTDD--------DGNLAAVADGVGGSPYGEEAAQLAVETFINYLKKLLSQESPSSIEALIRAIK 74 (212)
T ss_dssp ----TTSSS--EEEEEE-TC--------CTCEEEEEEEESTTTHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHH
T ss_pred ccccCCCCCCCCCEEeeeCC--------CCEEEEEEECCCCCchhHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHH
Confidence 57889999999999965321 226779999999 44556667777766666553322 23333
Q ss_pred HHHHhh---------hhcCCcCCCCceEEEEEeCCeEEEEEeCCceeEEE-ecccCCCCCCCccccCceeEEEcCCCCC
Q 024932 129 ESLLQE---------SVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVA-RSSIVDGSNNHLDELSSLKAIVVTRVHK 197 (260)
Q Consensus 129 ~~l~~~---------~~~~~~~~GsTa~v~~i~~~~l~vanvGDSravl~-~~~~~~g~~~~~~~~~~~~~~~LT~dH~ 197 (260)
.++... ........+||++++++.+++++++|+||||+++. +.+ ....|+.+|.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~tTl~~~v~~~~~~~~~~iGD~~i~~~~~~g---------------~~~~l~~~~~ 138 (212)
T PF13672_consen 75 KEILSIVRAFQSAKQADLELRDYGTTLLALVIDPDKVYIFNIGDSRIYVIRRNG---------------EIQQLTDDHS 138 (212)
T ss_dssp HHHHHHH----HHHHHSGGGTT-EE-EEEEEEETTEEEEEEESS-EEEEEEETT---------------EEEE-S---B
T ss_pred HHHHHHhhhhhhhhhccccccccCceEEEEEEECCEEEEEEECCCeEEEEECCC---------------EEEEcCCCcc
Confidence 333311 11223345899999999999999999999999765 555 8899999996
No 15
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases.
Probab=98.93 E-value=1.9e-08 Score=84.33 Aligned_cols=94 Identities=20% Similarity=0.075 Sum_probs=67.5
Q ss_pred CCCCCeEEEecCCCCCCCCCCceeEEEEecCCCChHHHHHHHHHHHHHHHHccCc------hHHHHHHHHHhhhhcCCcC
Q 024932 68 HTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLP------RFRKTDESLLQESVSGGWQ 141 (260)
Q Consensus 68 ~~nED~~~~~~~~~~~~~~~~~~~lfgVfDGHGG~~aa~~~~~~l~~~l~~~~~~------~f~~~d~~l~~~~~~~~~~ 141 (260)
...-|.+.+... ..+..+|+|+||||+...|.+++..+...+.+.... .+..+++.+... ....
T Consensus 15 ~~~GD~~~~~~~-------~~~~~~~~v~Dg~G~G~~aa~~s~~~~~~~~~~~~~~~~~~~~l~~~n~~l~~~---~~~~ 84 (193)
T smart00331 15 QVGGDFYDVVKL-------PEGRLLIAIADVMGKGLAAALAMSMARSALRTLLSEGISLSQILERLNRAIYEN---GEDG 84 (193)
T ss_pred hcCccEEEEEEe-------CCCeEEEEEEecCCCChHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHhc---CCCC
Confidence 445677766532 123478999999998877777787777777554222 155666665443 2345
Q ss_pred CCCceEEEEE--eCCeEEEEEeCCceeEEEec
Q 024932 142 DGATAVCIWI--LGRTVFVANIGDAKAVVARS 171 (260)
Q Consensus 142 ~GsTa~v~~i--~~~~l~vanvGDSravl~~~ 171 (260)
.|+|++++++ ..++++++|+||+|+++++.
T Consensus 85 ~~~T~~~~~id~~~~~l~~~~~Gd~~~~~~~~ 116 (193)
T smart00331 85 MFATLFLALYDFAGGTLSYANAGHSPPYLLRA 116 (193)
T ss_pred cEEEEEEEEEECCCCEEEEEeCCCCceEEEEC
Confidence 7999999988 67899999999999999983
No 16
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=98.71 E-value=1.8e-07 Score=83.49 Aligned_cols=96 Identities=19% Similarity=0.192 Sum_probs=63.2
Q ss_pred CCCCCeEEEecCCCCCCCCCCceeEEEEecCCCCh-----HHHHHHHHHHHHHHHHc-----cCc-h-HHHHHHHHHhhh
Q 024932 68 HTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGR-----LAAEYAQKRLHANVISA-----GLP-R-FRKTDESLLQES 135 (260)
Q Consensus 68 ~~nED~~~~~~~~~~~~~~~~~~~lfgVfDGHGG~-----~aa~~~~~~l~~~l~~~-----~~~-~-f~~~d~~l~~~~ 135 (260)
+.-||++++..+ ....++||+||.||. ..+.|.++.+. +..+. ..+ . -.-++..+.+..
T Consensus 89 ~~GEDa~Fvss~--------~~~~v~GVADGVGGWa~~GiDpg~fS~eLM~-~ce~~v~~~~~~~~~P~~lL~~ay~~l~ 159 (330)
T KOG1379|consen 89 KGGEDAWFVSSN--------PHAIVMGVADGVGGWAEYGIDPGAFSRELMS-NCERLVQNSDFNPSDPVNLLEKAYAELK 159 (330)
T ss_pred CCCCcceeeccC--------cccceEEEccccchHhhcCcCHHHHHHHHHH-HHHHHhcccccCCCChHHHHHHHHHHHh
Confidence 346999999754 234789999999954 56776555443 33222 111 1 222333333322
Q ss_pred hc-CCcCCCCceEEEEEe--CCeEEEEEeCCceeEEEecc
Q 024932 136 VS-GGWQDGATAVCIWIL--GRTVFVANIGDAKAVVARSS 172 (260)
Q Consensus 136 ~~-~~~~~GsTa~v~~i~--~~~l~vanvGDSravl~~~~ 172 (260)
.. -..-++|||+++++. +.+||+||+|||-..+.|+|
T Consensus 160 ~~~~~~vGSSTAcI~~l~~~~~~Lh~aNLGDSGF~VvR~G 199 (330)
T KOG1379|consen 160 SQKVPIVGSSTACILALDRENGKLHTANLGDSGFLVVREG 199 (330)
T ss_pred hcCCCCCCcceeeeeeeecCCCeEEEeeccCcceEEEECC
Confidence 22 223467899999888 88999999999999999998
No 17
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=97.54 E-value=0.00099 Score=67.62 Aligned_cols=120 Identities=17% Similarity=0.083 Sum_probs=76.2
Q ss_pred eeeEEEEEe-ccCCCCCCCCCeEEEecCCCCCCCCCCceeEEEEecCCC-ChHHHHHHHHHHHHHHH---HccCch---H
Q 024932 53 FVEIEADAA-EDKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHG-GRLAAEYAQKRLHANVI---SAGLPR---F 124 (260)
Q Consensus 53 ~~~~~~g~~-s~~G~R~~nED~~~~~~~~~~~~~~~~~~~lfgVfDGHG-G~~aa~~~~~~l~~~l~---~~~~~~---f 124 (260)
.+.+.+|++ ..++.+..+.|.+.+... .++..+++|.||.| |..|+ ..+....+.+. +...+. .
T Consensus 549 ~~~~~~g~a~~~k~g~~vsGD~y~~~~l-------~~g~~~~~laDGmGhG~~Aa-~~S~~~~~ll~~~~~~g~~~~~ai 620 (764)
T TIGR02865 549 KYHVSTGVARAAKDGELVSGDSYSFGKL-------SAGKYAVAISDGMGSGPEAA-QESSACVRLLEKFLESGFDREVAI 620 (764)
T ss_pred ceeehhhHHHhcCCCCcccCceEEEEEE-------CCCEEEEEEEcccCCCHHHH-HHHHHHHHHHHHHHHcCCCHHHHH
Confidence 355556665 345567788999877541 12336799999999 44444 33433333332 222221 4
Q ss_pred HHHHHHHHhhhhcCCcCCCCceEEEEEe--CCeEEEEEeCCceeEEEecccCCCCCCCccccCceeEEEcCCCCCC
Q 024932 125 RKTDESLLQESVSGGWQDGATAVCIWIL--GRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKA 198 (260)
Q Consensus 125 ~~~d~~l~~~~~~~~~~~GsTa~v~~i~--~~~l~vanvGDSravl~~~~~~~g~~~~~~~~~~~~~~~LT~dH~p 198 (260)
..++..+... ......+|+.+++++ .+++.++|+|++++++.+.+ .+.+++..+.|
T Consensus 621 ~~lN~~L~~~---~~~~~faTl~l~~IDl~~g~~~~~~aG~~p~~i~r~~---------------~v~~i~s~~lP 678 (764)
T TIGR02865 621 KTVNSILSLR---STDEKFSTLDLSVIDLYTGQAEFVKVGAVPSFIKRGA---------------KVEVIRSSNLP 678 (764)
T ss_pred HHHHHHHHhC---CCCCeEEEEEEEEEECCCCeEEEEecCCCceEEEECC---------------EEEEecCCCce
Confidence 5555555332 222457999888885 67899999999999998877 77777666554
No 18
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 3KE6_B 3ZT9_A 3RNR_A 3EQ2_A 3F7A_B 3F79_A 3ES2_B 3PU9_B 3T91_B 3T9Q_B ....
Probab=96.91 E-value=0.025 Score=46.92 Aligned_cols=80 Identities=23% Similarity=0.210 Sum_probs=50.6
Q ss_pred eeEEEEecCCC-ChHHHHHHHHHHHHHHHH---cc-Cch--HHHHHHHHHhhhhcCCcCCCCceEEEEEe--CCeEEEEE
Q 024932 90 CAHFAIFDGHG-GRLAAEYAQKRLHANVIS---AG-LPR--FRKTDESLLQESVSGGWQDGATAVCIWIL--GRTVFVAN 160 (260)
Q Consensus 90 ~~lfgVfDGHG-G~~aa~~~~~~l~~~l~~---~~-~~~--f~~~d~~l~~~~~~~~~~~GsTa~v~~i~--~~~l~van 160 (260)
..++.|.|+.| |-.|| +++..+...+.. .. .+. ...+++.+....... ...+|++++.+. .++++++|
T Consensus 4 ~~~~~v~D~~GhG~~aa-~~~~~~~~~~~~~~~~~~~p~~~l~~ln~~l~~~~~~~--~~~~t~~~~~~d~~~~~l~~~~ 80 (193)
T PF07228_consen 4 RYFIIVGDVSGHGVSAA-LLSAALASAIRELLDEGLDPEELLEALNRRLYRDLKGD--NRYATACYAIIDPETGTLTYAN 80 (193)
T ss_dssp EEEEEEEEESSSSHHHH-HHHHHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHTTTT--STTEEEEEEEEETTTTEEEEEE
T ss_pred EEEEEEEEecCCCHHHH-HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhhc--cccceEEEEEecccceEEEEeC
Confidence 46899999988 44443 333334433322 22 121 555566554433322 357788877765 56899999
Q ss_pred eCCceeEEEecc
Q 024932 161 IGDAKAVVARSS 172 (260)
Q Consensus 161 vGDSravl~~~~ 172 (260)
+|++++++++.+
T Consensus 81 aG~~~~l~~~~~ 92 (193)
T PF07228_consen 81 AGHPPPLLLRPG 92 (193)
T ss_dssp ESSSEEEEEETT
T ss_pred CCCCCEEEEecc
Confidence 999999999994
No 19
>PLN02388 phosphopantetheine adenylyltransferase
Probab=21.96 E-value=61 Score=27.08 Aligned_cols=18 Identities=22% Similarity=0.134 Sum_probs=14.0
Q ss_pred CCceeEEEEecC-CCChHH
Q 024932 87 NLRCAHFAIFDG-HGGRLA 104 (260)
Q Consensus 87 ~~~~~lfgVfDG-HGG~~a 104 (260)
.+.+.+.|-||| |-||+.
T Consensus 19 ~~~Vv~gGtFDgLH~GHq~ 37 (177)
T PLN02388 19 YGAVVLGGTFDRLHDGHRL 37 (177)
T ss_pred CCeEEEEecCCccCHHHHH
Confidence 345688999999 669965
No 20
>PF05785 CNF1: Rho-activating domain of cytotoxic necrotizing factor; InterPro: IPR008430 This entry represents several bacterial cytotoxic necrotizing factor proteins as well as related dermonecrotic toxin (DNT) from Bordetella species. Cytotoxic necrotizing factor 1 (CNF1) is a toxin whose structure from Escherichia coli revealed a 4-layer alpha/beta/beta/alpha structure containing mixed beta-sheets []. CNF1 is expressed in strains of E. coli causing uropathogenic and neonatal meningitis. CNF1 alters host cell actin cytoskeleton and promotes bacterial invasion of the blood-brain barrier endothelial cells []. CNF1 belongs to a unique group of large cytotoxins that cause constitutive activation of Rho guanosine triphosphatases (GTPases), which are key regulators of the actin cytoskeleton []. Bordetella dermonecrotic toxin (DNT) stimulates the assembly of actin stress fibres and focal adhesions by deamidating or polyaminating Gln63 of the small GTPase Rho. DNT is an A-B toxin composed of an N-terminal receptor-binding (B) domain and a C-terminal enzymatically active (A) domain [].; PDB: 1HZG_A 1HQ0_A.
Probab=21.84 E-value=1e+02 Score=27.70 Aligned_cols=25 Identities=16% Similarity=0.248 Sum_probs=18.9
Q ss_pred CcCCCCceEEEEEeCCeEEEEEeCCc
Q 024932 139 GWQDGATAVCIWILGRTVFVANIGDA 164 (260)
Q Consensus 139 ~~~~GsTa~v~~i~~~~l~vanvGDS 164 (260)
...+|||.+++ ++++.+|..|+|-+
T Consensus 129 G~LSGCT~i~A-~K~~~~y~~HtGk~ 153 (281)
T PF05785_consen 129 GALSGCTMIYA-RKDNYFYAYHTGKS 153 (281)
T ss_dssp --BSS-EEEEE-EETTEEEEEEEEES
T ss_pred CccCCCEEEEE-EcCCeEEEEEcCCC
Confidence 34689998866 78899999999976
Done!