Query 024936
Match_columns 260
No_of_seqs 125 out of 254
Neff 4.3
Searched_HMMs 46136
Date Fri Mar 29 08:37:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024936.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024936hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF06941 NT5C: 5' nucleotidase 99.9 6.6E-26 1.4E-30 193.7 4.9 113 143-255 2-123 (191)
2 COG4502 5'(3')-deoxyribonucleo 99.8 5E-21 1.1E-25 163.5 4.9 110 142-256 2-116 (180)
3 COG5663 Uncharacterized conser 99.2 1.1E-12 2.3E-17 114.9 -0.2 106 143-254 6-117 (194)
4 PHA02597 30.2 hypothetical pro 98.9 2.5E-09 5.4E-14 90.6 5.4 90 143-236 2-98 (197)
5 PRK11009 aphA acid phosphatase 98.7 3.1E-08 6.7E-13 89.8 6.9 93 142-252 62-157 (237)
6 TIGR01672 AphA HAD superfamily 98.0 1.8E-05 4E-10 71.8 8.0 94 142-254 62-159 (237)
7 TIGR01449 PGP_bact 2-phosphogl 98.0 1.6E-05 3.6E-10 67.3 6.8 91 146-237 1-111 (213)
8 TIGR01454 AHBA_synth_RP 3-amin 98.0 5.6E-06 1.2E-10 70.6 3.3 89 146-237 1-101 (205)
9 TIGR01533 lipo_e_P4 5'-nucleot 98.0 2.8E-05 6.1E-10 71.8 8.0 82 142-249 74-158 (266)
10 PRK13225 phosphoglycolate phos 98.0 1.1E-05 2.4E-10 73.9 5.2 104 132-237 51-168 (273)
11 TIGR01990 bPGM beta-phosphoglu 97.9 1.9E-05 4E-10 65.4 5.9 91 146-236 2-112 (185)
12 TIGR01675 plant-AP plant acid 97.9 3.3E-05 7.1E-10 70.3 7.6 86 141-252 75-164 (229)
13 PRK11590 hypothetical protein; 97.9 3.2E-05 7E-10 67.2 7.3 94 142-237 5-122 (211)
14 TIGR02009 PGMB-YQAB-SF beta-ph 97.9 2.9E-05 6.2E-10 64.3 6.5 93 144-236 2-113 (185)
15 TIGR01422 phosphonatase phosph 97.9 3.2E-05 6.9E-10 68.3 6.3 91 145-237 4-125 (253)
16 PRK13478 phosphonoacetaldehyde 97.8 3.2E-05 7E-10 69.1 6.2 93 144-237 5-127 (267)
17 PRK10725 fructose-1-P/6-phosph 97.8 6.9E-05 1.5E-09 62.5 7.4 91 144-236 6-111 (188)
18 PRK10826 2-deoxyglucose-6-phos 97.8 3.4E-05 7.4E-10 66.7 5.6 93 143-236 7-117 (222)
19 TIGR01549 HAD-SF-IA-v1 haloaci 97.8 3.3E-05 7.2E-10 62.5 5.2 98 146-254 2-110 (154)
20 PF03767 Acid_phosphat_B: HAD 97.8 2.4E-05 5.2E-10 70.2 4.3 83 141-249 70-155 (229)
21 COG0546 Gph Predicted phosphat 97.8 5.3E-05 1.2E-09 66.3 6.3 95 143-237 4-115 (220)
22 PRK13288 pyrophosphatase PpaX; 97.8 8.6E-05 1.9E-09 63.7 7.2 88 144-237 4-108 (214)
23 PRK09449 dUMP phosphatase; Pro 97.8 5.3E-05 1.1E-09 65.1 5.8 27 210-236 93-119 (224)
24 TIGR03351 PhnX-like phosphonat 97.7 3.8E-05 8.2E-10 65.9 4.8 93 145-237 3-113 (220)
25 TIGR01993 Pyr-5-nucltdase pyri 97.7 8.6E-06 1.9E-10 68.3 0.6 87 145-237 2-107 (184)
26 TIGR01680 Veg_Stor_Prot vegeta 97.7 0.00013 2.8E-09 68.2 8.4 85 142-251 100-188 (275)
27 TIGR01548 HAD-SF-IA-hyp1 haloa 97.7 0.0001 2.2E-09 62.7 6.9 92 145-237 2-132 (197)
28 PRK13223 phosphoglycolate phos 97.7 7.1E-05 1.5E-09 68.0 5.7 97 139-237 9-127 (272)
29 PRK11587 putative phosphatase; 97.7 8.4E-05 1.8E-09 64.3 5.7 90 145-237 5-109 (218)
30 PLN02770 haloacid dehalogenase 97.7 5E-05 1.1E-09 67.6 4.4 28 210-237 106-134 (248)
31 TIGR02252 DREG-2 REG-2-like, H 97.6 6.9E-05 1.5E-09 63.5 4.8 27 210-236 103-130 (203)
32 PLN02940 riboflavin kinase 97.6 0.00011 2.4E-09 70.3 6.2 107 145-253 13-140 (382)
33 COG0637 Predicted phosphatase/ 97.6 0.00028 6E-09 62.4 8.1 89 145-236 4-111 (221)
34 PF13419 HAD_2: Haloacid dehal 97.5 1.8E-05 3.9E-10 63.1 -0.2 88 146-237 1-103 (176)
35 PLN03243 haloacid dehalogenase 97.5 0.00017 3.6E-09 65.6 5.8 94 142-237 23-135 (260)
36 TIGR00338 serB phosphoserine p 97.5 0.00011 2.5E-09 62.9 4.4 106 140-251 11-123 (219)
37 PRK13226 phosphoglycolate phos 97.5 0.00013 2.8E-09 64.0 4.7 95 142-237 11-121 (229)
38 PRK13222 phosphoglycolate phos 97.4 0.00053 1.1E-08 58.5 7.1 103 144-248 7-129 (226)
39 TIGR01545 YfhB_g-proteo haloac 97.4 0.00021 4.5E-09 63.0 4.6 94 142-237 4-121 (210)
40 PRK06698 bifunctional 5'-methy 97.4 0.00013 2.9E-09 70.7 3.6 28 210-237 328-356 (459)
41 TIGR02247 HAD-1A3-hyp Epoxide 97.4 0.00064 1.4E-08 58.1 7.2 27 210-236 92-119 (211)
42 PLN02779 haloacid dehalogenase 97.3 0.00018 4E-09 65.9 4.0 26 211-236 143-169 (286)
43 TIGR02253 CTE7 HAD superfamily 97.3 0.0001 2.2E-09 63.0 2.0 28 210-237 92-120 (221)
44 TIGR01509 HAD-SF-IA-v3 haloaci 97.3 0.00036 7.8E-09 57.2 5.0 28 211-238 84-112 (183)
45 PLN02575 haloacid dehalogenase 97.3 0.00018 3.9E-09 69.7 3.7 109 144-253 132-262 (381)
46 PRK13582 thrH phosphoserine ph 97.3 0.00032 7E-09 59.3 4.6 29 209-237 65-93 (205)
47 PRK09552 mtnX 2-hydroxy-3-keto 97.2 0.0011 2.3E-08 57.8 7.5 42 210-252 72-114 (219)
48 PRK10563 6-phosphogluconate ph 97.2 0.00043 9.4E-09 59.5 5.0 104 144-251 5-129 (221)
49 TIGR02254 YjjG/YfnB HAD superf 97.2 0.00039 8.4E-09 59.1 4.6 28 210-237 95-122 (224)
50 TIGR01491 HAD-SF-IB-PSPlk HAD- 97.2 0.00039 8.4E-09 58.1 4.5 28 210-237 78-106 (201)
51 cd01427 HAD_like Haloacid deha 97.2 0.0004 8.7E-09 52.5 4.1 39 210-249 22-61 (139)
52 smart00775 LNS2 LNS2 domain. T 97.2 0.00039 8.5E-09 58.9 4.4 35 214-248 29-66 (157)
53 PRK14988 GMP/IMP nucleotidase; 97.2 0.00086 1.9E-08 59.1 6.5 28 209-236 90-118 (224)
54 TIGR01489 DKMTPPase-SF 2,3-dik 97.2 0.00043 9.4E-09 57.1 4.2 28 210-237 70-98 (188)
55 COG0560 SerB Phosphoserine pho 97.2 0.00086 1.9E-08 59.6 6.1 84 142-236 4-102 (212)
56 PRK10748 flavin mononucleotide 97.2 0.00024 5.3E-09 62.7 2.6 28 210-237 111-138 (238)
57 PLN02954 phosphoserine phospha 97.1 0.001 2.2E-08 57.3 5.6 84 144-237 13-110 (224)
58 TIGR03333 salvage_mtnX 2-hydro 97.1 0.0021 4.5E-08 55.9 7.3 96 146-251 2-109 (214)
59 TIGR01428 HAD_type_II 2-haloal 97.1 0.0016 3.5E-08 55.0 6.5 28 210-237 90-118 (198)
60 TIGR01488 HAD-SF-IB Haloacid D 96.9 0.0032 6.9E-08 51.7 6.4 38 210-248 71-109 (177)
61 TIGR01689 EcbF-BcbF capsule bi 96.8 0.0014 3.1E-08 54.5 4.1 41 212-252 24-80 (126)
62 COG2503 Predicted secreted aci 96.8 0.0035 7.5E-08 58.5 6.9 93 140-258 76-173 (274)
63 PLN02919 haloacid dehalogenase 96.8 0.0016 3.5E-08 70.1 5.4 93 145-237 77-187 (1057)
64 PLN02811 hydrolase 96.8 0.0023 5E-08 55.6 5.4 86 150-237 1-104 (220)
65 TIGR02137 HSK-PSP phosphoserin 96.7 0.0049 1.1E-07 54.2 6.6 79 146-237 4-93 (203)
66 TIGR01490 HAD-SF-IB-hyp1 HAD-s 96.6 0.0017 3.6E-08 54.9 3.0 48 187-237 65-113 (202)
67 PRK11133 serB phosphoserine ph 96.5 0.0054 1.2E-07 58.0 5.9 106 141-252 108-220 (322)
68 PRK09456 ?-D-glucose-1-phospha 96.2 0.0092 2E-07 50.9 5.3 27 211-237 83-110 (199)
69 KOG2914 Predicted haloacid-hal 96.2 0.02 4.4E-07 52.0 7.6 103 145-254 12-137 (222)
70 TIGR02250 FCP1_euk FCP1-like p 95.5 0.01 2.2E-07 50.5 2.8 38 210-247 56-95 (156)
71 PHA02530 pseT polynucleotide k 95.4 0.017 3.7E-07 52.2 4.1 40 210-249 185-227 (300)
72 smart00577 CPDc catalytic doma 95.4 0.0037 8.1E-08 51.8 -0.4 28 210-237 43-70 (148)
73 TIGR01493 HAD-SF-IA-v2 Haloaci 95.3 0.0072 1.6E-07 49.9 1.0 23 146-168 2-24 (175)
74 PF12710 HAD: haloacid dehalog 94.9 0.0061 1.3E-07 50.4 -0.5 31 215-246 92-123 (192)
75 KOG3120 Predicted haloacid deh 94.6 0.096 2.1E-06 48.6 6.4 40 209-249 81-122 (256)
76 TIGR02251 HIF-SF_euk Dullard-l 94.5 0.053 1.1E-06 46.0 4.3 27 211-237 41-67 (162)
77 PF08235 LNS2: LNS2 (Lipin/Ned 94.4 0.044 9.6E-07 47.5 3.7 37 213-249 28-67 (157)
78 COG1011 Predicted hydrolase (H 94.0 0.052 1.1E-06 46.2 3.4 47 210-256 97-147 (229)
79 PRK08942 D,D-heptose 1,7-bisph 93.4 0.11 2.4E-06 43.9 4.2 27 211-237 28-55 (181)
80 PF06888 Put_Phosphatase: Puta 93.1 0.19 4.1E-06 46.0 5.6 40 209-249 68-110 (234)
81 PRK08238 hypothetical protein; 92.0 0.27 5.9E-06 49.1 5.5 84 144-237 11-98 (479)
82 PRK14501 putative bifunctional 91.6 0.45 9.7E-06 49.3 6.8 27 212-238 514-542 (726)
83 PF08282 Hydrolase_3: haloacid 90.7 0.36 7.8E-06 40.6 4.2 23 215-237 18-41 (254)
84 TIGR01544 HAD-SF-IE haloacid d 90.4 0.72 1.6E-05 43.3 6.3 28 210-237 119-147 (277)
85 PRK00192 mannosyl-3-phosphogly 89.8 0.42 9.1E-06 43.0 4.1 15 142-156 3-17 (273)
86 TIGR02245 HAD_IIID1 HAD-superf 89.8 0.28 6.1E-06 43.7 2.9 25 213-237 46-70 (195)
87 PRK10187 trehalose-6-phosphate 88.4 0.61 1.3E-05 42.5 4.2 18 140-157 11-28 (266)
88 TIGR00685 T6PP trehalose-phosp 87.4 0.62 1.3E-05 41.5 3.5 27 212-238 25-53 (244)
89 PF13344 Hydrolase_6: Haloacid 86.0 1.1 2.5E-05 35.2 4.0 27 210-236 12-39 (101)
90 PLN02580 trehalose-phosphatase 86.0 0.79 1.7E-05 44.9 3.7 26 212-237 141-166 (384)
91 PLN02177 glycerol-3-phosphate 85.9 1.5 3.2E-05 44.3 5.6 103 143-255 22-149 (497)
92 PLN03017 trehalose-phosphatase 84.6 0.79 1.7E-05 44.7 2.9 18 140-157 108-125 (366)
93 PLN02151 trehalose-phosphatase 83.7 1.5 3.3E-05 42.6 4.5 26 212-237 120-145 (354)
94 TIGR00213 GmhB_yaeD D,D-heptos 80.6 2 4.4E-05 36.1 3.6 27 211-237 25-52 (176)
95 PLN02499 glycerol-3-phosphate 79.2 3.3 7.2E-05 42.1 5.2 106 140-255 5-135 (498)
96 TIGR01459 HAD-SF-IIA-hyp4 HAD- 79.1 3.9 8.5E-05 36.2 5.1 27 210-236 22-49 (242)
97 TIGR01662 HAD-SF-IIIA HAD-supe 78.4 2.6 5.7E-05 33.3 3.4 26 212-237 25-51 (132)
98 TIGR01691 enolase-ppase 2,3-di 78.3 3.4 7.4E-05 37.1 4.5 39 197-237 82-121 (220)
99 TIGR01460 HAD-SF-IIA Haloacid 75.4 5.8 0.00013 35.2 5.2 93 146-249 1-99 (236)
100 PF13344 Hydrolase_6: Haloacid 74.9 3.2 6.8E-05 32.7 3.0 11 146-156 1-11 (101)
101 TIGR01458 HAD-SF-IIA-hyp3 HAD- 73.9 5.4 0.00012 36.1 4.6 25 213-237 22-47 (257)
102 TIGR01261 hisB_Nterm histidino 73.3 3 6.5E-05 35.5 2.6 26 211-236 28-54 (161)
103 TIGR01460 HAD-SF-IIA Haloacid 73.0 7.8 0.00017 34.4 5.3 42 210-251 12-56 (236)
104 TIGR01656 Histidinol-ppas hist 69.8 4 8.6E-05 33.4 2.6 26 212-237 27-53 (147)
105 PF03031 NIF: NLI interacting 69.8 3.3 7.1E-05 34.0 2.0 37 212-248 36-74 (159)
106 TIGR01485 SPP_plant-cyano sucr 68.9 5.1 0.00011 35.5 3.2 27 143-169 1-34 (249)
107 COG0561 Cof Predicted hydrolas 68.1 2.6 5.6E-05 37.4 1.2 15 142-156 2-16 (264)
108 TIGR01664 DNA-3'-Pase DNA 3'-p 67.7 9 0.0002 32.6 4.4 24 213-236 43-67 (166)
109 PLN02645 phosphoglycolate phos 67.6 8.4 0.00018 35.8 4.5 26 212-237 44-70 (311)
110 PLN02423 phosphomannomutase 67.6 3.2 7E-05 37.3 1.7 16 141-156 5-20 (245)
111 KOG3040 Predicted sugar phosph 67.5 7.5 0.00016 36.2 4.1 25 212-236 23-48 (262)
112 PF11019 DUF2608: Protein of u 67.2 14 0.00031 33.8 5.9 37 212-248 81-120 (252)
113 PRK06769 hypothetical protein; 67.0 5 0.00011 34.1 2.6 25 212-236 28-53 (173)
114 TIGR01681 HAD-SF-IIIC HAD-supe 66.8 7.3 0.00016 31.5 3.5 25 212-236 29-54 (128)
115 COG4359 Uncharacterized conser 66.8 12 0.00025 34.4 5.0 86 142-237 2-99 (220)
116 TIGR01689 EcbF-BcbF capsule bi 66.1 3 6.4E-05 34.8 1.1 12 145-156 3-14 (126)
117 PLN03063 alpha,alpha-trehalose 65.1 10 0.00022 40.4 5.0 36 211-247 531-568 (797)
118 PF02358 Trehalose_PPase: Treh 63.0 5 0.00011 35.4 2.0 43 211-256 18-62 (235)
119 TIGR01668 YqeG_hyp_ppase HAD s 62.8 14 0.00031 31.2 4.7 40 211-251 42-82 (170)
120 COG3700 AphA Acid phosphatase 61.7 12 0.00027 34.2 4.3 17 144-160 64-80 (237)
121 PLN02205 alpha,alpha-trehalose 61.4 9.9 0.00021 40.9 4.2 24 215-238 619-644 (854)
122 PTZ00174 phosphomannomutase; P 61.0 4.5 9.7E-05 36.1 1.4 14 143-156 5-18 (247)
123 KOG2116 Protein involved in pl 59.9 16 0.00034 38.8 5.2 21 144-164 531-553 (738)
124 PF10045 DUF2280: Uncharacteri 59.6 3.9 8.5E-05 33.6 0.7 63 156-221 20-84 (104)
125 PRK10444 UMP phosphatase; Prov 58.9 16 0.00034 33.2 4.5 25 212-236 17-42 (248)
126 TIGR02463 MPGP_rel mannosyl-3- 57.9 4.4 9.5E-05 34.8 0.7 11 146-156 2-12 (221)
127 PRK10976 putative hydrolase; P 57.8 5.2 0.00011 35.4 1.2 13 144-156 3-15 (266)
128 TIGR01457 HAD-SF-IIA-hyp2 HAD- 57.0 17 0.00038 32.5 4.4 23 213-235 18-41 (249)
129 PRK10530 pyridoxal phosphate ( 56.6 5.1 0.00011 35.2 0.9 13 144-156 4-16 (272)
130 PRK03669 mannosyl-3-phosphogly 56.5 6.2 0.00013 35.5 1.5 15 142-156 6-20 (271)
131 TIGR01457 HAD-SF-IIA-hyp2 HAD- 55.1 25 0.00053 31.6 5.1 12 145-156 3-14 (249)
132 PRK01158 phosphoglycolate phos 54.9 6 0.00013 33.9 1.1 13 144-156 4-16 (230)
133 TIGR01685 MDP-1 magnesium-depe 54.9 19 0.00041 31.4 4.2 27 210-236 43-70 (174)
134 KOG3085 Predicted hydrolase (H 54.1 15 0.00033 34.0 3.6 27 210-236 111-138 (237)
135 TIGR01487 SPP-like sucrose-pho 53.9 6.1 0.00013 34.0 0.9 12 145-156 3-14 (215)
136 PRK15126 thiamin pyrimidine py 53.5 6.6 0.00014 35.0 1.1 13 144-156 3-15 (272)
137 PRK15455 PrkA family serine pr 53.1 21 0.00045 37.6 4.8 74 147-224 292-367 (644)
138 TIGR01452 PGP_euk phosphoglyco 53.0 22 0.00047 32.3 4.4 24 213-236 19-43 (279)
139 TIGR01482 SPP-subfamily Sucros 52.5 4.9 0.00011 34.3 0.1 11 146-156 1-11 (225)
140 TIGR01456 CECR5 HAD-superfamil 52.2 27 0.00059 32.6 5.0 41 211-251 15-62 (321)
141 PRK10513 sugar phosphate phosp 51.7 7.2 0.00016 34.5 1.1 13 144-156 4-16 (270)
142 PF08645 PNK3P: Polynucleotide 51.2 11 0.00025 31.9 2.2 22 215-236 32-54 (159)
143 COG0647 NagD Predicted sugar p 50.2 30 0.00064 32.5 4.9 27 210-236 22-49 (269)
144 COG4229 Predicted enolase-phos 50.1 74 0.0016 29.3 7.2 32 210-241 101-133 (229)
145 PF06189 5-nucleotidase: 5'-nu 50.0 31 0.00068 32.6 5.0 16 141-156 119-134 (264)
146 TIGR01456 CECR5 HAD-superfamil 49.6 25 0.00053 32.9 4.3 23 145-167 2-27 (321)
147 PF00702 Hydrolase: haloacid d 49.1 11 0.00025 31.2 1.8 27 210-236 125-152 (215)
148 COG5083 SMP2 Uncharacterized p 47.8 13 0.00028 38.0 2.2 29 140-168 372-402 (580)
149 TIGR01681 HAD-SF-IIIC HAD-supe 47.3 17 0.00037 29.3 2.5 13 145-157 2-14 (128)
150 COG0241 HisB Histidinol phosph 46.7 15 0.00033 32.6 2.3 39 212-250 31-80 (181)
151 TIGR00099 Cof-subfamily Cof su 44.9 9.3 0.0002 33.6 0.7 11 146-156 2-12 (256)
152 KOG1615 Phosphoserine phosphat 43.0 1.1E+02 0.0025 28.3 7.3 25 212-236 88-113 (227)
153 TIGR01670 YrbI-phosphatas 3-de 40.2 12 0.00026 31.1 0.7 12 145-156 3-14 (154)
154 PF00702 Hydrolase: haloacid d 40.1 13 0.00029 30.7 0.9 13 145-157 3-15 (215)
155 PRK09484 3-deoxy-D-manno-octul 40.1 14 0.00029 31.7 1.0 14 143-156 21-34 (183)
156 PRK01158 phosphoglycolate phos 39.9 38 0.00083 29.0 3.7 27 213-239 21-48 (230)
157 TIGR01487 SPP-like sucrose-pho 39.2 40 0.00087 28.9 3.8 27 213-239 19-46 (215)
158 TIGR02461 osmo_MPG_phos mannos 38.2 14 0.00031 32.7 0.8 11 146-156 2-12 (225)
159 TIGR01486 HAD-SF-IIB-MPGP mann 35.9 15 0.00032 32.6 0.5 11 146-156 2-12 (256)
160 TIGR01664 DNA-3'-Pase DNA 3'-p 35.9 22 0.00049 30.2 1.6 15 142-156 12-26 (166)
161 PRK12702 mannosyl-3-phosphogly 35.2 19 0.00041 34.6 1.2 14 143-156 1-14 (302)
162 KOG3107 Predicted haloacid deh 35.2 43 0.00094 33.7 3.7 30 145-174 199-228 (468)
163 COG1877 OtsB Trehalose-6-phosp 34.7 52 0.0011 30.9 4.0 43 211-256 39-83 (266)
164 TIGR02726 phenyl_P_delta pheny 34.6 17 0.00037 31.4 0.7 13 144-156 8-20 (169)
165 TIGR02461 osmo_MPG_phos mannos 34.1 41 0.00088 29.8 3.1 28 213-240 16-44 (225)
166 PRK05446 imidazole glycerol-ph 34.0 35 0.00077 33.1 2.8 26 211-236 29-55 (354)
167 TIGR01486 HAD-SF-IIB-MPGP mann 33.7 42 0.0009 29.7 3.1 35 213-248 17-52 (256)
168 TIGR02471 sucr_syn_bact_C sucr 33.2 18 0.00038 31.6 0.6 21 146-166 2-25 (236)
169 COG1778 Low specificity phosph 32.4 20 0.00044 31.9 0.8 12 145-156 10-21 (170)
170 smart00851 MGS MGS-like domain 31.5 69 0.0015 24.1 3.6 27 217-249 2-29 (90)
171 TIGR01663 PNK-3'Pase polynucle 31.5 43 0.00093 34.3 3.1 24 213-236 198-222 (526)
172 COG1568 Predicted methyltransf 30.7 36 0.00078 33.1 2.2 35 134-172 166-201 (354)
173 PLN02887 hydrolase family prot 30.2 26 0.00056 36.2 1.3 17 140-156 305-321 (580)
174 PF11480 ImmE5: Colicin-E5 Imm 29.6 50 0.0011 26.3 2.5 20 217-236 62-82 (83)
175 PRK10530 pyridoxal phosphate ( 29.4 62 0.0013 28.3 3.4 27 213-239 21-48 (272)
176 PRK10513 sugar phosphate phosp 28.7 50 0.0011 29.1 2.7 27 214-240 22-49 (270)
177 TIGR01484 HAD-SF-IIB HAD-super 28.7 58 0.0012 27.5 3.0 24 215-238 20-44 (204)
178 PRK00647 hypothetical protein; 28.1 1.1E+02 0.0025 24.7 4.4 49 210-258 34-96 (96)
179 PRK10976 putative hydrolase; P 27.6 54 0.0012 28.9 2.7 26 214-239 21-47 (266)
180 PRK15126 thiamin pyrimidine py 27.6 53 0.0012 29.2 2.7 28 213-240 20-48 (272)
181 TIGR00099 Cof-subfamily Cof su 27.1 87 0.0019 27.5 3.9 27 213-239 17-44 (256)
182 COG0647 NagD Predicted sugar p 26.1 99 0.0022 29.0 4.3 26 143-168 8-36 (269)
183 TIGR01658 EYA-cons_domain eyes 25.3 42 0.00091 31.9 1.6 30 145-174 4-35 (274)
184 TIGR02463 MPGP_rel mannosyl-3- 25.2 72 0.0016 27.3 3.0 27 213-239 17-44 (221)
185 KOG2882 p-Nitrophenyl phosphat 24.4 73 0.0016 30.8 3.1 27 210-236 36-63 (306)
186 TIGR01512 ATPase-IB2_Cd heavy 23.6 65 0.0014 32.4 2.7 26 211-236 361-388 (536)
187 TIGR02244 HAD-IG-Ncltidse HAD 23.5 1.3E+02 0.0028 29.3 4.6 26 211-236 183-209 (343)
188 KOG2121 Predicted metal-depend 23.3 1.8E+02 0.004 31.4 6.0 103 118-250 444-553 (746)
189 PF00072 Response_reg: Respons 23.3 1.2E+02 0.0025 22.2 3.5 87 146-247 2-91 (112)
190 TIGR01511 ATPase-IB1_Cu copper 23.3 68 0.0015 32.5 2.8 28 210-237 403-431 (562)
191 TIGR01525 ATPase-IB_hvy heavy 23.0 71 0.0015 32.2 2.9 27 210-236 382-410 (556)
192 COG1658 Small primase-like pro 22.5 2.6E+02 0.0055 23.7 5.7 54 197-252 23-81 (127)
193 TIGR01482 SPP-subfamily Sucros 22.5 80 0.0017 26.8 2.7 27 213-239 16-43 (225)
194 PLN02382 probable sucrose-phos 21.8 48 0.001 32.5 1.4 15 142-156 8-22 (413)
195 KOG1736 Glia maturation factor 21.4 1E+02 0.0022 26.6 3.0 36 215-252 107-142 (143)
196 TIGR01684 viral_ppase viral ph 21.3 47 0.001 32.0 1.2 14 143-156 126-139 (301)
197 cd01424 MGS_CPS_II Methylglyox 21.3 1.3E+02 0.0028 23.4 3.5 27 217-249 15-42 (110)
198 PRK03669 mannosyl-3-phosphogly 21.2 84 0.0018 28.2 2.7 25 215-239 27-52 (271)
199 PRK14502 bifunctional mannosyl 21.1 57 0.0012 34.8 1.8 16 141-156 414-429 (694)
200 KOG3109 Haloacid dehalogenase- 21.1 1.4E+02 0.0031 28.0 4.2 110 141-255 13-146 (244)
201 KOG2938 Predicted inosine-urid 21.1 1.9E+02 0.0041 28.4 5.2 73 140-222 18-91 (350)
202 KOG3350 Uncharacterized conser 20.9 1.3E+02 0.0029 27.6 3.8 70 176-251 115-185 (217)
203 cd00532 MGS-like MGS-like doma 20.8 1.3E+02 0.0028 23.7 3.5 9 240-248 32-40 (112)
No 1
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=99.92 E-value=6.6e-26 Score=193.72 Aligned_cols=113 Identities=24% Similarity=0.382 Sum_probs=94.2
Q ss_pred CeEEEEeccchhHhHHHHHHHHHHHHhCCC--cccccceeeeeeeecCCCHHHHHHHHHHHhcCcCCCCCCCCcccHHHH
Q 024936 143 KIVVAVDVDEVLGNFVSALNRFIADRYSLN--HSVSEYHVYEFFKIWNCSRDEADLRVHEFFKTPYFKTGIHPLPGAQKA 220 (260)
Q Consensus 143 KmrIaIDIDGVLADfi~~fnk~~Ne~yG~n--ltveD~~~Yd~~kv~gvs~EE~~~~l~ef~e~~~Ff~~LpPIPGAqEv 220 (260)
|++|||||||||||+++.+++++|+.||.+ ++.++++.|...+.||+++++..+.+.+++.+++|+.+++|+|||+|+
T Consensus 2 ~i~I~iDiDgVLad~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~~~e~~~~~~~~~~~~~~f~~l~p~~gA~e~ 81 (191)
T PF06941_consen 2 KIRIAIDIDGVLADFNSAFIEWFNEEFGKNPELTPEDITGYWDWEKWGITEPEFYEKLWRFYEEPGFFSNLPPIPGAVEA 81 (191)
T ss_dssp -EEEEEESBTTTB-HHHHHHHHHHHHTTTS----GGGGTSSSHHHHHHHHSTTHHHHHHHHHTSTTTTTT--B-TTHHHH
T ss_pred CcEEEEECCCCCcccHHHHHHHHHHHcCCCCCCCHHHhhhhhHHHHhCCCCHHHHHHHHHHHhChhhhcCCCccHHHHHH
Confidence 568999999999999999999999999999 889999887777888877777778888999999999999999999999
Q ss_pred HHHHhhC-CcEEEEeCCC------CchhHHHHHHHhCCCCcc
Q 024936 221 LHKLSRY-CLGNMLSRTI------PLNGLRSIIRDYFRRSTL 255 (260)
Q Consensus 221 L~kLse~-yEIyIVTAR~------~~e~T~~WL~eHFPfi~~ 255 (260)
|++|.+. ++++|||||. ..++|++||++|||++..
T Consensus 82 l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~~ 123 (191)
T PF06941_consen 82 LKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIPY 123 (191)
T ss_dssp HHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHHH
T ss_pred HHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCch
Confidence 9999885 6999999992 358999999999998763
No 2
>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]
Probab=99.82 E-value=5e-21 Score=163.54 Aligned_cols=110 Identities=16% Similarity=0.249 Sum_probs=92.6
Q ss_pred CCeEEEEeccchhHhHHHHHHHHHHHHhCC-CcccccceeeeeeeecCCCHHHHHHHHHHHhcCcCCCCCCCCcccHHHH
Q 024936 142 GKIVVAVDVDEVLGNFVSALNRFIADRYSL-NHSVSEYHVYEFFKIWNCSRDEADLRVHEFFKTPYFKTGIHPLPGAQKA 220 (260)
Q Consensus 142 ~KmrIaIDIDGVLADfi~~fnk~~Ne~yG~-nltveD~~~Yd~~kv~gvs~EE~~~~l~ef~e~~~Ff~~LpPIPGAqEv 220 (260)
+|+.||||||.||+|++..+++.+| .|.. -++.+|+..+++.. ..+++.. .+++...+|+||+++.++|+||+|
T Consensus 2 ~kk~iaIDmD~vLadll~ewv~~~N-~y~D~~lk~~di~gwdik~---yv~~~~g-~i~~il~ep~fFRnL~V~p~aq~v 76 (180)
T COG4502 2 NKKTIAIDMDTVLADLLREWVKRYN-IYKDKLLKMSDIKGWDIKN---YVKPECG-KIYDILKEPHFFRNLGVQPFAQTV 76 (180)
T ss_pred CCceEEeeHHHHHHHHHHHHHHHhh-hccccCcChHhhcccchhh---ccCccCC-eeeeeccCcchhhhcCccccHHHH
Confidence 5789999999999999999999999 4544 44557887775444 3444444 577889999999999999999999
Q ss_pred HHHHhhCCcEEEEeCCC----CchhHHHHHHHhCCCCccc
Q 024936 221 LHKLSRYCLGNMLSRTI----PLNGLRSIIRDYFRRSTLA 256 (260)
Q Consensus 221 L~kLse~yEIyIVTAR~----~~e~T~~WL~eHFPfi~~~ 256 (260)
+++|.+.|+||||||++ +.+.|++||.+.||||+-.
T Consensus 77 ~keLt~~y~vYivtaamdhp~s~~dK~eWl~E~FPFi~~q 116 (180)
T COG4502 77 LKELTSIYNVYIVTAAMDHPKSCEDKGEWLKEKFPFISYQ 116 (180)
T ss_pred HHHHHhhheEEEEEeccCCchhHHHHHHHHHHHCCCCChh
Confidence 99999999999999994 5688999999999999853
No 3
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=99.24 E-value=1.1e-12 Score=114.94 Aligned_cols=106 Identities=13% Similarity=0.078 Sum_probs=85.9
Q ss_pred CeEEEEeccchhHh---HHHHHHHHHHHHhCCCcccccceeeeeeeecCCCHHHHHHHHHHHhcCcCCCCCCCCcccHHH
Q 024936 143 KIVVAVDVDEVLGN---FVSALNRFIADRYSLNHSVSEYHVYEFFKIWNCSRDEADLRVHEFFKTPYFKTGIHPLPGAQK 219 (260)
Q Consensus 143 KmrIaIDIDGVLAD---fi~~fnk~~Ne~yG~nltveD~~~Yd~~kv~gvs~EE~~~~l~ef~e~~~Ff~~LpPIPGAqE 219 (260)
..++||||||||+| |++.++.. |.+.++..|.+.|+++++.+++.||+++++.+ .+.-.+. ++....++..
T Consensus 6 ~~~~ciDIDGtit~~~t~~~~~n~~----f~kslse~d~t~y~lhkil~i~~ee~~k~~e~-~ea~l~k-e~l~~q~v~~ 79 (194)
T COG5663 6 QLRCCIDIDGTITDDPTFAPYLNPA----FEKSLSEADPTDYDLHKILNITTEEFWKWMEQ-TEAWLYK-EALLAQLVKQ 79 (194)
T ss_pred HhheeeccCCceecCcccchhccHH----HHhhhhhcccccccHHHHhCccHHHHHHHHHH-HHHHHHH-HHHHHHHHHH
Confidence 35799999999995 66655555 66889999999999999999999999987665 5555555 4666788999
Q ss_pred HHHHHhhCCcEEEEeCC--CCchhHHHHHHH-hCCCCc
Q 024936 220 ALHKLSRYCLGNMLSRT--IPLNGLRSIIRD-YFRRST 254 (260)
Q Consensus 220 vL~kLse~yEIyIVTAR--~~~e~T~~WL~e-HFPfi~ 254 (260)
+|.+|++.++|++|||| .....|+.||.. ..|+.+
T Consensus 80 ~L~~~~e~~~L~~itar~~dl~~iT~~~l~~q~ih~~~ 117 (194)
T COG5663 80 VLPSLKEEHRLIYITARKADLTRITYAWLFIQNIHYDH 117 (194)
T ss_pred HhHHHHhhceeeeeehhhHHHHHHHHHHHHHhccchhh
Confidence 99999999999999999 567889999975 344433
No 4
>PHA02597 30.2 hypothetical protein; Provisional
Probab=98.88 E-value=2.5e-09 Score=90.59 Aligned_cols=90 Identities=18% Similarity=0.232 Sum_probs=63.9
Q ss_pred CeEEEEeccchhHhHHHHHHHHHHHHhCCCcccccce-------eeeeeeecCCCHHHHHHHHHHHhcCcCCCCCCCCcc
Q 024936 143 KIVVAVDVDEVLGNFVSALNRFIADRYSLNHSVSEYH-------VYEFFKIWNCSRDEADLRVHEFFKTPYFKTGIHPLP 215 (260)
Q Consensus 143 KmrIaIDIDGVLADfi~~fnk~~Ne~yG~nltveD~~-------~Yd~~kv~gvs~EE~~~~l~ef~e~~~Ff~~LpPIP 215 (260)
.+.|.+||||||+|+...+..+++ .||.+. +++. .+.+.+.++.++++..+.+..|.+. .+....+++|
T Consensus 2 ~k~viFDlDGTLiD~~~~~~~~~~-~~g~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p 77 (197)
T PHA02597 2 KPTILTDVDGVLLSWQSGLPYFAQ-KYNIPT--DHILKMIQDERFRDPGELFGCDQELAKKLIEKYNNS-DFIRYLSAYD 77 (197)
T ss_pred CcEEEEecCCceEchhhccHHHHH-hcCCCH--HHHHHHHhHhhhcCHHHHhcccHHHHHHHhhhhhHH-HHHHhccCCC
Confidence 467999999999999998877774 578653 2211 1222344555666666666665543 2334678999
Q ss_pred cHHHHHHHHhhCCcEEEEeCC
Q 024936 216 GAQKALHKLSRYCLGNMLSRT 236 (260)
Q Consensus 216 GAqEvL~kLse~yEIyIVTAR 236 (260)
|+.|+|++|++.+.++++|+.
T Consensus 78 G~~e~L~~L~~~~~~~i~Tn~ 98 (197)
T PHA02597 78 DALDVINKLKEDYDFVAVTAL 98 (197)
T ss_pred CHHHHHHHHHhcCCEEEEeCC
Confidence 999999999887889998886
No 5
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=98.70 E-value=3.1e-08 Score=89.77 Aligned_cols=93 Identities=12% Similarity=0.066 Sum_probs=62.4
Q ss_pred CCeEEEEeccchhHhHHHHHHHHHHHHhCCCcccccceeeeeeeecCCCHHHHHHHHHHHhcCcCCCCCCCCcccHHHHH
Q 024936 142 GKIVVAVDVDEVLGNFVSALNRFIADRYSLNHSVSEYHVYEFFKIWNCSRDEADLRVHEFFKTPYFKTGIHPLPGAQKAL 221 (260)
Q Consensus 142 ~KmrIaIDIDGVLADfi~~fnk~~Ne~yG~nltveD~~~Yd~~kv~gvs~EE~~~~l~ef~e~~~Ff~~LpPIPGAqEvL 221 (260)
.+|.|+|||||||+|--+.+.. -++.|+.+ . ..| ++.+++++++.+ .. .....|.|||+|.|
T Consensus 62 ~p~av~~DIDeTvldnsp~~~~-~~~~f~~~--~---~~y-------~~~~~fw~~y~~----~~-~~~a~p~~Ga~elL 123 (237)
T PRK11009 62 PPMAVGFDIDDTVLFSSPGFWR-GKKTFSPG--S---EDY-------LKNQKFWEKMNN----GW-DEFSIPKEVARQLI 123 (237)
T ss_pred CCcEEEEECcCccccCCchhee-eeeccCCC--c---ccc-------cChHHHHHHHHh----cc-cccCcchHHHHHHH
Confidence 3569999999999974332111 13334333 1 112 445665555443 21 22367889999999
Q ss_pred HHH-hhCCcEEEEeCCC--CchhHHHHHHHhCCC
Q 024936 222 HKL-SRYCLGNMLSRTI--PLNGLRSIIRDYFRR 252 (260)
Q Consensus 222 ~kL-se~yEIyIVTAR~--~~e~T~~WL~eHFPf 252 (260)
+.| .++++|+|||+|. ..+.|.+||.++|..
T Consensus 124 ~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gi 157 (237)
T PRK11009 124 DMHVKRGDSIYFITGRTATKTETVSKTLADDFHI 157 (237)
T ss_pred HHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCC
Confidence 999 4589999999994 568899999998765
No 6
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=98.03 E-value=1.8e-05 Score=71.77 Aligned_cols=94 Identities=13% Similarity=0.043 Sum_probs=62.4
Q ss_pred CCeEEEEeccchhHhHHHHHHHHHHHHhCCCc-ccccceeeeeeeecCCCHHHHHHHHHHHhcCcCCCCCCCCcccHHHH
Q 024936 142 GKIVVAVDVDEVLGNFVSALNRFIADRYSLNH-SVSEYHVYEFFKIWNCSRDEADLRVHEFFKTPYFKTGIHPLPGAQKA 220 (260)
Q Consensus 142 ~KmrIaIDIDGVLADfi~~fnk~~Ne~yG~nl-tveD~~~Yd~~kv~gvs~EE~~~~l~ef~e~~~Ff~~LpPIPGAqEv 220 (260)
.+|.|.+||||||.|--+.+ .+|... +.+++.. ..| ..+++.+.++. .....|.++|.|.
T Consensus 62 ~p~aViFDlDgTLlDSs~~~------~~G~~~~s~~~~~~-----l~g---~~~w~~~~~~~-----~~~s~p~~~a~el 122 (237)
T TIGR01672 62 PPIAVSFDIDDTVLFSSPGF------WRGKKTFSPGSEDY-----LKN---QVFWEKVNNGW-----DEFSIPKEVARQL 122 (237)
T ss_pred CCeEEEEeCCCccccCcHHH------hCCcccCCHHHhhh-----hcC---hHHHHHHHHhc-----ccCCcchhHHHHH
Confidence 34589999999999988887 167653 4443321 112 23344444433 1133566779999
Q ss_pred HHHHhh-CCcEEEEeCCCC--chhHHHHHHHhCCCCc
Q 024936 221 LHKLSR-YCLGNMLSRTIP--LNGLRSIIRDYFRRST 254 (260)
Q Consensus 221 L~kLse-~yEIyIVTAR~~--~e~T~~WL~eHFPfi~ 254 (260)
|+.|.+ ++.|+|||+|.. .+.+-+-|.+||..-.
T Consensus 123 L~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~ 159 (237)
T TIGR01672 123 IDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPA 159 (237)
T ss_pred HHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCch
Confidence 999966 799999999933 5567777888877643
No 7
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=98.00 E-value=1.6e-05 Score=67.29 Aligned_cols=91 Identities=10% Similarity=0.055 Sum_probs=51.8
Q ss_pred EEEeccchhHhHHHHHHHHHH---HHhCCC-ccccccee---e-------eeeeecC--CCHHHHHHH---HHHHhcCcC
Q 024936 146 VAVDVDEVLGNFVSALNRFIA---DRYSLN-HSVSEYHV---Y-------EFFKIWN--CSRDEADLR---VHEFFKTPY 206 (260)
Q Consensus 146 IaIDIDGVLADfi~~fnk~~N---e~yG~n-ltveD~~~---Y-------d~~kv~g--vs~EE~~~~---l~ef~e~~~ 206 (260)
|.+|+||||.|..+.+.+.++ +++|.+ ++.+++.. . .+.+.++ .+.++..+. +.+++.+.
T Consensus 1 viFD~DGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 79 (213)
T TIGR01449 1 VLFDLDGTLVDSAPDIAAAVNMALAALGLPPATLARVIGFIGNGVPVLMERVLAWAGQEPDAQRVAELRKLFDRHYEEV- 79 (213)
T ss_pred CeecCCCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhcccHHHHHHHHhhccccccChHHHHHHHHHHHHHHHHh-
Confidence 579999999986555544444 346664 34322211 0 0111122 222222222 23333332
Q ss_pred CCCCCCCcccHHHHHHHHhh-CCcEEEEeCCC
Q 024936 207 FKTGIHPLPGAQKALHKLSR-YCLGNMLSRTI 237 (260)
Q Consensus 207 Ff~~LpPIPGAqEvL~kLse-~yEIyIVTAR~ 237 (260)
+....++.||+.+.|+.|++ ++.+.|+|+..
T Consensus 80 ~~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~ 111 (213)
T TIGR01449 80 AGELTSVFPGVEATLGALRAKGLRLGLVTNKP 111 (213)
T ss_pred ccccCccCCCHHHHHHHHHHCCCeEEEEeCCC
Confidence 22246899999999999966 68999999973
No 8
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=97.96 E-value=5.6e-06 Score=70.55 Aligned_cols=89 Identities=17% Similarity=0.229 Sum_probs=51.5
Q ss_pred EEEeccchhHhHHHHHHHHHH----HHhCCC-cccccce---ee---eeeeecCCCHHHHHHHHHHHhcCcCCCCCCCCc
Q 024936 146 VAVDVDEVLGNFVSALNRFIA----DRYSLN-HSVSEYH---VY---EFFKIWNCSRDEADLRVHEFFKTPYFKTGIHPL 214 (260)
Q Consensus 146 IaIDIDGVLADfi~~fnk~~N----e~yG~n-ltveD~~---~Y---d~~kv~gvs~EE~~~~l~ef~e~~~Ff~~LpPI 214 (260)
|.+||||||.|..+.+.+.++ +.+|.+ .+.+++. .. ++.+.++.+.+.......+++. +...++|.
T Consensus 1 iiFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 77 (205)
T TIGR01454 1 VVFDLDGVLVDSFAVMREAFAIAYREVVGDGPAPFEEYRRHLGRYFPDIMRIMGLPLEMEEPFVRESYR---LAGEVEVF 77 (205)
T ss_pred CeecCcCccccCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHhCccHHHHHHHcCCCHHHHHHHHHHHHH---hhcccccC
Confidence 579999999986665555555 434543 2322221 11 1111223322211112222221 23467999
Q ss_pred ccHHHHHHHHhh-CCcEEEEeCCC
Q 024936 215 PGAQKALHKLSR-YCLGNMLSRTI 237 (260)
Q Consensus 215 PGAqEvL~kLse-~yEIyIVTAR~ 237 (260)
||+.+.|++|++ ++.+.|+|+..
T Consensus 78 ~g~~~~L~~L~~~g~~~~i~Sn~~ 101 (205)
T TIGR01454 78 PGVPELLAELRADGVGTAIATGKS 101 (205)
T ss_pred CCHHHHHHHHHHCCCeEEEEeCCc
Confidence 999999999976 78999999973
No 9
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=97.95 E-value=2.8e-05 Score=71.84 Aligned_cols=82 Identities=11% Similarity=0.112 Sum_probs=56.2
Q ss_pred CCeEEEEeccchhHhHHHHHHHHHHHHhCCCcccccceeeeeeeecCCCHHHHHHHHHHHhcCcCCCCCCCCcccHHHHH
Q 024936 142 GKIVVAVDVDEVLGNFVSALNRFIADRYSLNHSVSEYHVYEFFKIWNCSRDEADLRVHEFFKTPYFKTGIHPLPGAQKAL 221 (260)
Q Consensus 142 ~KmrIaIDIDGVLADfi~~fnk~~Ne~yG~nltveD~~~Yd~~kv~gvs~EE~~~~l~ef~e~~~Ff~~LpPIPGAqEvL 221 (260)
+++-|.+|||||+.|..++...... .|.. | +++. +.++.... ..+|+|||.|.|
T Consensus 74 kp~AVV~DIDeTvLdns~y~~~~~~--~~~~--------~--------~~~~----w~~wv~~~----~a~~ipGA~e~L 127 (266)
T TIGR01533 74 KKYAIVLDLDETVLDNSPYQGYQVL--NNKP--------F--------DPET----WDKWVQAA----QAKPVAGALDFL 127 (266)
T ss_pred CCCEEEEeCccccccChHHHHHHhc--CCCc--------C--------CHHH----HHHHHHcC----CCCcCccHHHHH
Confidence 4678999999999987776322210 1111 1 1222 22333332 568999999999
Q ss_pred HHHhh-CCcEEEEeCCC--CchhHHHHHHHh
Q 024936 222 HKLSR-YCLGNMLSRTI--PLNGLRSIIRDY 249 (260)
Q Consensus 222 ~kLse-~yEIyIVTAR~--~~e~T~~WL~eH 249 (260)
+.|.+ +..|+|||+|. ..+.|.+||+++
T Consensus 128 ~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~ 158 (266)
T TIGR01533 128 NYANSKGVKIFYVSNRSEKEKAATLKNLKRF 158 (266)
T ss_pred HHHHHCCCeEEEEeCCCcchHHHHHHHHHHc
Confidence 99966 68999999994 567899999874
No 10
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=97.95 E-value=1.1e-05 Score=73.86 Aligned_cols=104 Identities=15% Similarity=0.150 Sum_probs=60.2
Q ss_pred CCCccCCCCCCCeEEEEeccchhHhHHHHHHHHHH---HHhCCC-cccccc---ee---eeeeeecCCCHHHHH---HHH
Q 024936 132 PLGFFDSHLHGKIVVAVDVDEVLGNFVSALNRFIA---DRYSLN-HSVSEY---HV---YEFFKIWNCSRDEAD---LRV 198 (260)
Q Consensus 132 p~~~~~~~~~~KmrIaIDIDGVLADfi~~fnk~~N---e~yG~n-ltveD~---~~---Yd~~kv~gvs~EE~~---~~l 198 (260)
|+-||-.-.+....|.+||||||.|..+.+.+.++ ++||.+ ++.+++ .. .++.+.++.++++.. +.+
T Consensus 51 ~~~~~~~~~~~~k~vIFDlDGTLiDS~~~~~~a~~~~~~~~G~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~ 130 (273)
T PRK13225 51 PQVFPQSYPQTLQAIIFDFDGTLVDSLPTVVAIANAHAPDFGYDPIDERDYAQLRQWSSRTIVRRAGLSPWQQARLLQRV 130 (273)
T ss_pred hhhhhhhhhhhcCEEEECCcCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhCccHHHHHHHcCCCHHHHHHHHHHH
Confidence 45466443334446999999999986544433333 445654 322111 11 111123344433332 233
Q ss_pred HHHhcCcCCCCCCCCcccHHHHHHHHhh-CCcEEEEeCCC
Q 024936 199 HEFFKTPYFKTGIHPLPGAQKALHKLSR-YCLGNMLSRTI 237 (260)
Q Consensus 199 ~ef~e~~~Ff~~LpPIPGAqEvL~kLse-~yEIyIVTAR~ 237 (260)
.+++.. . ...+.|.||+.+.|++|++ ++.+.|||+..
T Consensus 131 ~~~~~~-~-~~~~~l~pg~~e~L~~L~~~gi~laIvSn~~ 168 (273)
T PRK13225 131 QRQLGD-C-LPALQLFPGVADLLAQLRSRSLCLGILSSNS 168 (273)
T ss_pred HHHHHh-h-cccCCcCCCHHHHHHHHHHCCCeEEEEeCCC
Confidence 343333 2 2367899999999999976 68999999884
No 11
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=97.94 E-value=1.9e-05 Score=65.39 Aligned_cols=91 Identities=15% Similarity=0.150 Sum_probs=52.0
Q ss_pred EEEeccchhHhHHHHHHHHHH---HHhCCCcccccceee----------eeeeecC--CCHHHHHHHHHH---HhcCcC-
Q 024936 146 VAVDVDEVLGNFVSALNRFIA---DRYSLNHSVSEYHVY----------EFFKIWN--CSRDEADLRVHE---FFKTPY- 206 (260)
Q Consensus 146 IaIDIDGVLADfi~~fnk~~N---e~yG~nltveD~~~Y----------d~~kv~g--vs~EE~~~~l~e---f~e~~~- 206 (260)
|.+|+||||.|..+.+.+.++ +.||.+++.+....+ .+.+.++ +++++..+.+.. ++....
T Consensus 2 iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (185)
T TIGR01990 2 VIFDLDGVITDTAEYHYLAWKALADELGIPFDEEFNESLKGVSREDSLERILDLGGKKYSEEEKEELAERKNDYYVELLK 81 (185)
T ss_pred eEEcCCCccccChHHHHHHHHHHHHHcCCCCCHHHHHHhcCCChHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 789999999987776655555 566776543221110 0001112 233332222221 121110
Q ss_pred CCCCCCCcccHHHHHHHHhh-CCcEEEEeCC
Q 024936 207 FKTGIHPLPGAQKALHKLSR-YCLGNMLSRT 236 (260)
Q Consensus 207 Ff~~LpPIPGAqEvL~kLse-~yEIyIVTAR 236 (260)
-....+++||+.+.|++|++ ++.+.|+|+.
T Consensus 82 ~~~~~~~~pg~~~~L~~L~~~g~~~~i~s~~ 112 (185)
T TIGR01990 82 ELTPADVLPGIKNLLDDLKKNNIKIALASAS 112 (185)
T ss_pred hcCCcccCccHHHHHHHHHHCCCeEEEEeCC
Confidence 01134789999999999966 6899999976
No 12
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=97.92 E-value=3.3e-05 Score=70.25 Aligned_cols=86 Identities=16% Similarity=0.082 Sum_probs=60.3
Q ss_pred CCCeEEEEeccchhHhHHHHHHHHHHHHhCCCcccccceeeeeeeecCCCHHHHHHHHHHHhcCcCCCCCCCCcccHHHH
Q 024936 141 HGKIVVAVDVDEVLGNFVSALNRFIADRYSLNHSVSEYHVYEFFKIWNCSRDEADLRVHEFFKTPYFKTGIHPLPGAQKA 220 (260)
Q Consensus 141 ~~KmrIaIDIDGVLADfi~~fnk~~Ne~yG~nltveD~~~Yd~~kv~gvs~EE~~~~l~ef~e~~~Ff~~LpPIPGAqEv 220 (260)
.+|..|.+|||||+.+..++..+. .||- +. | +++... ++... ...|++|++++.
T Consensus 75 dg~~A~V~DIDET~LsN~py~~~~---~~g~----~~---------~--~~~~~~----~wv~~----~~apaip~al~l 128 (229)
T TIGR01675 75 DGMDAWIFDVDDTLLSNIPYYKKH---GYGT----EK---------T--DPTAFW----LWLGK----GAAPALPEGLKL 128 (229)
T ss_pred CCCcEEEEccccccccCHHHHHHh---ccCC----Cc---------C--CHHHHH----HHHHc----CCCCCCHHHHHH
Confidence 367789999999999988874333 1221 11 1 122222 22222 256999999999
Q ss_pred HHHHhh-CCcEEEEeCCC--CchhHHHHHHHh-CCC
Q 024936 221 LHKLSR-YCLGNMLSRTI--PLNGLRSIIRDY-FRR 252 (260)
Q Consensus 221 L~kLse-~yEIyIVTAR~--~~e~T~~WL~eH-FPf 252 (260)
+++|.+ +++|+|+|.|. ..+.|.+||.++ ||+
T Consensus 129 ~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~ 164 (229)
T TIGR01675 129 YQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTG 164 (229)
T ss_pred HHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCC
Confidence 999965 89999999994 467899999885 664
No 13
>PRK11590 hypothetical protein; Provisional
Probab=97.91 E-value=3.2e-05 Score=67.23 Aligned_cols=94 Identities=18% Similarity=0.207 Sum_probs=60.5
Q ss_pred CCeEEEEeccchhH--hHHHHHHHHHHHHhCCCc-ccccc---e---eeeeee-------------ecCCCHHHHHHHHH
Q 024936 142 GKIVVAVDVDEVLG--NFVSALNRFIADRYSLNH-SVSEY---H---VYEFFK-------------IWNCSRDEADLRVH 199 (260)
Q Consensus 142 ~KmrIaIDIDGVLA--Dfi~~fnk~~Ne~yG~nl-tveD~---~---~Yd~~k-------------v~gvs~EE~~~~l~ 199 (260)
.++.+.+|+||||+ +....|+.++-+++|... +.+.+ . .+...+ ..|.++++..+...
T Consensus 5 ~~k~~iFD~DGTL~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 84 (211)
T PRK11590 5 ERRVVFFDLDGTLHQQDMFGSFLRYLLRRQPLNLLLVLPLLPVIGLGLLVKGRAARWPMSLLLWGCTFGHSEARLQALEA 84 (211)
T ss_pred cceEEEEecCCCCcccchHHHHHHHHHHhcchhhHHHhHHHHHhccCcccchhhhhhhHHHHHHHHHcCCCHHHHHHHHH
Confidence 45689999999999 688888888855677542 21111 0 111111 12567777666666
Q ss_pred HHhcCcCCCCCCCCcccHHHHH-HHHhh-CCcEEEEeCCC
Q 024936 200 EFFKTPYFKTGIHPLPGAQKAL-HKLSR-YCLGNMLSRTI 237 (260)
Q Consensus 200 ef~e~~~Ff~~LpPIPGAqEvL-~kLse-~yEIyIVTAR~ 237 (260)
+|.+. |...+.+.|||.|.| +.|.+ ++.|.||||..
T Consensus 85 ~f~~~--~~~~~~~~pga~e~L~~~l~~~G~~l~IvSas~ 122 (211)
T PRK11590 85 DFVRW--FRDNVTAFPVVQERLTTYLLSSDADVWLITGSP 122 (211)
T ss_pred HHHHH--HHHhCcCCccHHHHHHHHHHhCCCEEEEEeCCc
Confidence 65321 111256789999999 56765 78999999884
No 14
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=97.91 E-value=2.9e-05 Score=64.25 Aligned_cols=93 Identities=18% Similarity=0.199 Sum_probs=53.2
Q ss_pred eEEEEeccchhHhHHHHHHHH---HHHHhCCCcccccc---eeeeeee-------ec--CCCHHHHHHHH---HHHhcCc
Q 024936 144 IVVAVDVDEVLGNFVSALNRF---IADRYSLNHSVSEY---HVYEFFK-------IW--NCSRDEADLRV---HEFFKTP 205 (260)
Q Consensus 144 mrIaIDIDGVLADfi~~fnk~---~Ne~yG~nltveD~---~~Yd~~k-------v~--gvs~EE~~~~l---~ef~e~~ 205 (260)
..|.+|+||||.|..+...+. +.+++|.+++.+.. ......+ .. ++++++..+.. .+++.+.
T Consensus 2 ~~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (185)
T TIGR02009 2 KAVIFDMDGVIVDTAPLHAQAWKHLADKYGIEFDKQYNTSLGGLSREDILRAILKLRKPGLSLETIHQLAERKNELYREL 81 (185)
T ss_pred CeEEEcCCCcccCChHHHHHHHHHHHHHcCCCCCHHHHHHcCCCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 368999999999866554333 33557876542111 1110000 11 34444433222 2222221
Q ss_pred CCCCCCCCcccHHHHHHHHhh-CCcEEEEeCC
Q 024936 206 YFKTGIHPLPGAQKALHKLSR-YCLGNMLSRT 236 (260)
Q Consensus 206 ~Ff~~LpPIPGAqEvL~kLse-~yEIyIVTAR 236 (260)
.-....+|.||+.+.|+.|++ ++.|.|+|+.
T Consensus 82 ~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~ 113 (185)
T TIGR02009 82 LRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS 113 (185)
T ss_pred HhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc
Confidence 101246899999999999976 6899999987
No 15
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=97.86 E-value=3.2e-05 Score=68.27 Aligned_cols=91 Identities=12% Similarity=0.100 Sum_probs=55.0
Q ss_pred EEEEeccchhHhH-----HHHHHHHHHHHhCCCcccccceee---e-----------------eeeecC--CCHHHHHHH
Q 024936 145 VVAVDVDEVLGNF-----VSALNRFIADRYSLNHSVSEYHVY---E-----------------FFKIWN--CSRDEADLR 197 (260)
Q Consensus 145 rIaIDIDGVLADf-----i~~fnk~~Ne~yG~nltveD~~~Y---d-----------------~~kv~g--vs~EE~~~~ 197 (260)
.|.+||||||.|+ ...+++.+.+ ||.+++.+++... . +.+.++ .++++..+.
T Consensus 4 ~viFD~DGTLiDs~~~~~~~a~~~~~~~-~g~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (253)
T TIGR01422 4 AVIFDWAGTTVDFGSFAPTQAFVEAFAE-FGVQITLEEARGPMGLGKWDHIRALLKMPAVAERWRAKFGRLPTEADIEAI 82 (253)
T ss_pred EEEEeCCCCeecCCCccHHHHHHHHHHH-cCCCccHHHHHHhcCccHHHHHHHHhcCHHHHHHHHHHhCCCCCHHHHHHH
Confidence 5899999999984 4456666644 7877665543211 0 001112 123333332
Q ss_pred HHHH---hcCcCCCCCCCCcccHHHHHHHHhh-CCcEEEEeCCC
Q 024936 198 VHEF---FKTPYFKTGIHPLPGAQKALHKLSR-YCLGNMLSRTI 237 (260)
Q Consensus 198 l~ef---~e~~~Ff~~LpPIPGAqEvL~kLse-~yEIyIVTAR~ 237 (260)
+..| +.... .....|+||+.+.|+.|++ ++.+.|||+..
T Consensus 83 ~~~~~~~~~~~~-~~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~ 125 (253)
T TIGR01422 83 YEAFEPLQLAKL-AEYSSPIPGVIEVIAYLRARGIKIGSTTGYT 125 (253)
T ss_pred HHHHHHHHHHHH-HhcCccCCCHHHHHHHHHHCCCeEEEECCCc
Confidence 2222 12211 2356899999999999976 68999999873
No 16
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=97.84 E-value=3.2e-05 Score=69.13 Aligned_cols=93 Identities=13% Similarity=0.126 Sum_probs=55.6
Q ss_pred eEEEEeccchhHhH-----HHHHHHHHHHHhCCCcccccceee---e-----------------eeeecCC--CHHHHHH
Q 024936 144 IVVAVDVDEVLGNF-----VSALNRFIADRYSLNHSVSEYHVY---E-----------------FFKIWNC--SRDEADL 196 (260)
Q Consensus 144 mrIaIDIDGVLADf-----i~~fnk~~Ne~yG~nltveD~~~Y---d-----------------~~kv~gv--s~EE~~~ 196 (260)
..|.+|+||||.|+ ...+++.+. .||.+++.+++..+ . +.+.+|. ++++..+
T Consensus 5 k~vIFDlDGTLiDs~~~~~~~a~~~~~~-~~g~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 83 (267)
T PRK13478 5 QAVIFDWAGTTVDFGSFAPTQAFVEAFA-QFGVEITLEEARGPMGLGKWDHIRALLKMPRVAARWQAVFGRLPTEADVDA 83 (267)
T ss_pred EEEEEcCCCCeecCCCccHHHHHHHHHH-HcCCCCCHHHHHHhcCCCHHHHHHHHHhcHHHHHHHHHHhCCCCCHHHHHH
Confidence 36899999999985 356666664 47877655442110 0 0111222 2233333
Q ss_pred HHHHHhcC--cCCCCCCCCcccHHHHHHHHhh-CCcEEEEeCCC
Q 024936 197 RVHEFFKT--PYFKTGIHPLPGAQKALHKLSR-YCLGNMLSRTI 237 (260)
Q Consensus 197 ~l~ef~e~--~~Ff~~LpPIPGAqEvL~kLse-~yEIyIVTAR~ 237 (260)
.+..|... ..+.....|+||+.+.|+.|++ ++.+.|+|+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~pg~~elL~~L~~~g~~l~I~T~~~ 127 (267)
T PRK13478 84 LYAAFEPLQIAKLADYATPIPGVLEVIAALRARGIKIGSTTGYT 127 (267)
T ss_pred HHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHCCCEEEEEcCCc
Confidence 33222211 1122356899999999999966 79999999873
No 17
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=97.82 E-value=6.9e-05 Score=62.45 Aligned_cols=91 Identities=11% Similarity=0.093 Sum_probs=50.3
Q ss_pred eEEEEeccchhHhHHHHHHHHHHH---HhCCCccccccee------eeeee----ecC--CCHHHHHHHHHHHhcCcCCC
Q 024936 144 IVVAVDVDEVLGNFVSALNRFIAD---RYSLNHSVSEYHV------YEFFK----IWN--CSRDEADLRVHEFFKTPYFK 208 (260)
Q Consensus 144 mrIaIDIDGVLADfi~~fnk~~Ne---~yG~nltveD~~~------Yd~~k----v~g--vs~EE~~~~l~ef~e~~~Ff 208 (260)
..|.+|+||||.|+.+.+.+.+++ ++|.+++.+++.. +++.+ .++ .+.+++......++.... .
T Consensus 6 ~~viFD~DGTLiDs~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 84 (188)
T PRK10725 6 AGLIFDMDGTILDTEPTHRKAWREVLGRYGLQFDEQAMVALNGSPTWRIAQAIIELNQADLDPHALAREKTEAVKSML-L 84 (188)
T ss_pred eEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCHHHHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHH-h
Confidence 469999999999855444444333 2576554322111 00001 111 122333222222232222 2
Q ss_pred CCCCCcccHHHHHHHHhhCCcEEEEeCC
Q 024936 209 TGIHPLPGAQKALHKLSRYCLGNMLSRT 236 (260)
Q Consensus 209 ~~LpPIPGAqEvL~kLse~yEIyIVTAR 236 (260)
...+|.|+ .+.|..|.+++.+.|+|+.
T Consensus 85 ~~~~~~~~-~e~L~~L~~~~~l~I~T~~ 111 (188)
T PRK10725 85 DSVEPLPL-IEVVKAWHGRRPMAVGTGS 111 (188)
T ss_pred ccCCCccH-HHHHHHHHhCCCEEEEcCC
Confidence 35678885 6999999888899999986
No 18
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.81 E-value=3.4e-05 Score=66.68 Aligned_cols=93 Identities=18% Similarity=0.157 Sum_probs=54.5
Q ss_pred CeEEEEeccchhHhHHHHHHHHHH---HHhCCCccc-ccceee---e-------eeee--c-CCCHHHHHHHHHHHhcCc
Q 024936 143 KIVVAVDVDEVLGNFVSALNRFIA---DRYSLNHSV-SEYHVY---E-------FFKI--W-NCSRDEADLRVHEFFKTP 205 (260)
Q Consensus 143 KmrIaIDIDGVLADfi~~fnk~~N---e~yG~nltv-eD~~~Y---d-------~~kv--~-gvs~EE~~~~l~ef~e~~ 205 (260)
-.-|.+|+||||+|+.+.+.+.++ +++|.+.+. +++..+ . +.+. | +...++..+.+.+.+.+.
T Consensus 7 ~k~iiFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (222)
T PRK10826 7 ILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRREELPDTLGLRIDQVVDLWYARQPWNGPSRQEVVQRIIARVISL 86 (222)
T ss_pred CcEEEEcCCCCCCcCHHHHHHHHHHHHHHCCCCCCHHHHHHHhhCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHH
Confidence 346899999999987665544333 446766543 111110 0 0011 1 122223222233333322
Q ss_pred CCCCCCCCcccHHHHHHHHhh-CCcEEEEeCC
Q 024936 206 YFKTGIHPLPGAQKALHKLSR-YCLGNMLSRT 236 (260)
Q Consensus 206 ~Ff~~LpPIPGAqEvL~kLse-~yEIyIVTAR 236 (260)
+....+|+||+.+.|+.|++ ++.++|+|+.
T Consensus 87 -~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~ 117 (222)
T PRK10826 87 -IEETRPLLPGVREALALCKAQGLKIGLASAS 117 (222)
T ss_pred -HhcCCCCCCCHHHHHHHHHHCCCeEEEEeCC
Confidence 23357899999999999976 7999999997
No 19
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=97.81 E-value=3.3e-05 Score=62.55 Aligned_cols=98 Identities=14% Similarity=0.159 Sum_probs=55.9
Q ss_pred EEEeccchhHhHHHHH----HHHHHHHhCCCcccccceeeeeeeecCCCHHHHH---HHHHHHhcCcCCCCCCCCcccHH
Q 024936 146 VAVDVDEVLGNFVSAL----NRFIADRYSLNHSVSEYHVYEFFKIWNCSRDEAD---LRVHEFFKTPYFKTGIHPLPGAQ 218 (260)
Q Consensus 146 IaIDIDGVLADfi~~f----nk~~Ne~yG~nltveD~~~Yd~~kv~gvs~EE~~---~~l~ef~e~~~Ff~~LpPIPGAq 218 (260)
|.+|+||||.|..+.. .+.++ +||. +++.+. ...|...++.. ..+.++.. |....+.+||+.
T Consensus 2 iifD~DGTL~d~~~~~~~~~~~~~~-~~~~--~~~~~~-----~~~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~ 70 (154)
T TIGR01549 2 ILFDIDGTLVDSSFAIRRAFEETLE-EFGE--DFQALK-----ALRGLAEELLYRIATSFEELLG---YDAEEAYIRGAA 70 (154)
T ss_pred eEecCCCcccccHHHHHHHHHHHHH-Hhcc--cHHHHH-----HHHccChHHHHHHHHHHHHHhC---cchhheeccCHH
Confidence 7899999999865543 33333 3454 222221 12222222221 22334332 444667889999
Q ss_pred HHHHHHhh-CCcEEEEeCCCC--chhHHHH-HHHhCCCCc
Q 024936 219 KALHKLSR-YCLGNMLSRTIP--LNGLRSI-IRDYFRRST 254 (260)
Q Consensus 219 EvL~kLse-~yEIyIVTAR~~--~e~T~~W-L~eHFPfi~ 254 (260)
|.|+.|.+ ++.++|+|+... .....+- |..+|..+.
T Consensus 71 e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~l~~~f~~i~ 110 (154)
T TIGR01549 71 DLLKRLKEAGIKLGIISNGSLRAQKLLLRKHLGDYFDLIL 110 (154)
T ss_pred HHHHHHHHCcCeEEEEeCCchHHHHHHHHHHHHhcCcEEE
Confidence 99999965 689999999832 2222222 666665543
No 20
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=97.78 E-value=2.4e-05 Score=70.22 Aligned_cols=83 Identities=12% Similarity=0.087 Sum_probs=57.1
Q ss_pred CCCeEEEEeccchhHhHHHHHHHHHHHHhCCCcccccceeeeeeeecCCCHHHHHHHHHHHhcCcCCCCCCCCcccHHHH
Q 024936 141 HGKIVVAVDVDEVLGNFVSALNRFIADRYSLNHSVSEYHVYEFFKIWNCSRDEADLRVHEFFKTPYFKTGIHPLPGAQKA 220 (260)
Q Consensus 141 ~~KmrIaIDIDGVLADfi~~fnk~~Ne~yG~nltveD~~~Yd~~kv~gvs~EE~~~~l~ef~e~~~Ff~~LpPIPGAqEv 220 (260)
.+++.|.+|||||+.+-.++....... +..++. +. +.++.... ..++||||.+-
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~--~~~~~~----------------~~----w~~wv~~~----~~~aip~a~~l 123 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFG--GESFSP----------------ED----WDEWVASG----KAPAIPGALEL 123 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHH--THHH-C----------------CH----HHHHHHCT----GGEEETTHHHH
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhc--cCCCCh----------------HH----HHHHHhcc----cCcccHHHHHH
Confidence 466789999999998776654333210 111111 11 22333332 23899999999
Q ss_pred HHHHhh-CCcEEEEeCC--CCchhHHHHHHHh
Q 024936 221 LHKLSR-YCLGNMLSRT--IPLNGLRSIIRDY 249 (260)
Q Consensus 221 L~kLse-~yEIyIVTAR--~~~e~T~~WL~eH 249 (260)
++.+.+ +.+||+||.| ...+.|.+||+++
T Consensus 124 ~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~ 155 (229)
T PF03767_consen 124 YNYARSRGVKVFFITGRPESQREATEKNLKKA 155 (229)
T ss_dssp HHHHHHTTEEEEEEEEEETTCHHHHHHHHHHH
T ss_pred HHHHHHCCCeEEEEecCCchhHHHHHHHHHHc
Confidence 999966 7999999999 4578999999875
No 21
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=97.77 E-value=5.3e-05 Score=66.27 Aligned_cols=95 Identities=17% Similarity=0.168 Sum_probs=56.3
Q ss_pred CeEEEEeccchhHhHHHHHHHHHH---HHhCCC-cccccceee---ee----eeecCCC-HH---HHHHHHHHHhcCcCC
Q 024936 143 KIVVAVDVDEVLGNFVSALNRFIA---DRYSLN-HSVSEYHVY---EF----FKIWNCS-RD---EADLRVHEFFKTPYF 207 (260)
Q Consensus 143 KmrIaIDIDGVLADfi~~fnk~~N---e~yG~n-ltveD~~~Y---d~----~kv~gvs-~E---E~~~~l~ef~e~~~F 207 (260)
.+.|.+|+||||.|..+.+...++ +++|.. .+.+++..+ -. ...++.. .+ +..+.+.+.|...+.
T Consensus 4 ~~~iiFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (220)
T COG0546 4 IKAILFDLDGTLVDSAEDILRAFNAALAELGLPPLDEEEIRQLIGLGLDELIERLLGEADEEAAAELVERLREEFLTAYA 83 (220)
T ss_pred CCEEEEeCCCccccChHHHHHHHHHHHHHcCCCCCCHHHHHHHhcCCHHHHHHHHhccccchhHHHHHHHHHHHHHHHHH
Confidence 458999999999987777666444 556766 454443211 00 0001100 00 122223333333333
Q ss_pred CC-CCCCcccHHHHHHHHhh-CCcEEEEeCCC
Q 024936 208 KT-GIHPLPGAQKALHKLSR-YCLGNMLSRTI 237 (260)
Q Consensus 208 f~-~LpPIPGAqEvL~kLse-~yEIyIVTAR~ 237 (260)
.. ...|.||+.|+|.+|++ ++.+.|||+..
T Consensus 84 ~~~~~~~~~gv~e~L~~L~~~g~~l~i~T~k~ 115 (220)
T COG0546 84 ELLESRLFPGVKELLAALKSAGYKLGIVTNKP 115 (220)
T ss_pred hhccCccCCCHHHHHHHHHhCCCeEEEEeCCc
Confidence 21 14799999999999977 78999999883
No 22
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.76 E-value=8.6e-05 Score=63.69 Aligned_cols=88 Identities=13% Similarity=0.068 Sum_probs=52.0
Q ss_pred eEEEEeccchhHhHHHHHHHHHH---HHhCC-CcccccceeeeeeeecCCC---------HHHHHH---HHHHHhcCcCC
Q 024936 144 IVVAVDVDEVLGNFVSALNRFIA---DRYSL-NHSVSEYHVYEFFKIWNCS---------RDEADL---RVHEFFKTPYF 207 (260)
Q Consensus 144 mrIaIDIDGVLADfi~~fnk~~N---e~yG~-nltveD~~~Yd~~kv~gvs---------~EE~~~---~l~ef~e~~~F 207 (260)
..|.+|+||||.|......+.++ ++|+. ..+.+++. ..+|.+ +++..+ .+.+++... .
T Consensus 4 ~~viFD~DGTL~ds~~~~~~a~~~~~~~~~~~~~~~~~~~-----~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 77 (214)
T PRK13288 4 NTVLFDLDGTLINTNELIISSFLHTLKTYYPNQYKREDVL-----PFIGPSLHDTFSKIDESKVEEMITTYREFNHEH-H 77 (214)
T ss_pred cEEEEeCCCcCccCHHHHHHHHHHHHHHhCCCCCCHHHHH-----HHhCcCHHHHHHhcCHHHHHHHHHHHHHHHHHh-h
Confidence 47999999999986555444433 23343 33333221 223322 222222 223322222 2
Q ss_pred CCCCCCcccHHHHHHHHhh-CCcEEEEeCCC
Q 024936 208 KTGIHPLPGAQKALHKLSR-YCLGNMLSRTI 237 (260)
Q Consensus 208 f~~LpPIPGAqEvL~kLse-~yEIyIVTAR~ 237 (260)
....++.||+.+.|+.|++ ++.+.|+|+..
T Consensus 78 ~~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~ 108 (214)
T PRK13288 78 DELVTEYETVYETLKTLKKQGYKLGIVTTKM 108 (214)
T ss_pred hhhcccCcCHHHHHHHHHHCCCeEEEEeCCC
Confidence 2356899999999999976 78999999984
No 23
>PRK09449 dUMP phosphatase; Provisional
Probab=97.75 E-value=5.3e-05 Score=65.13 Aligned_cols=27 Identities=26% Similarity=0.336 Sum_probs=24.7
Q ss_pred CCCCcccHHHHHHHHhhCCcEEEEeCC
Q 024936 210 GIHPLPGAQKALHKLSRYCLGNMLSRT 236 (260)
Q Consensus 210 ~LpPIPGAqEvL~kLse~yEIyIVTAR 236 (260)
..+|.||+.++|++|++++.|.|+|+.
T Consensus 93 ~~~~~~g~~~~L~~L~~~~~~~i~Tn~ 119 (224)
T PRK09449 93 ICTPLPGAVELLNALRGKVKMGIITNG 119 (224)
T ss_pred cCccCccHHHHHHHHHhCCeEEEEeCC
Confidence 467999999999999988999999987
No 24
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=97.74 E-value=3.8e-05 Score=65.87 Aligned_cols=93 Identities=17% Similarity=0.136 Sum_probs=53.4
Q ss_pred EEEEeccchhHhHHHHHHHHHHH---HhCCCccccccee-e------ee-e---eecCCCHHHHHHHHHHHh---cCcCC
Q 024936 145 VVAVDVDEVLGNFVSALNRFIAD---RYSLNHSVSEYHV-Y------EF-F---KIWNCSRDEADLRVHEFF---KTPYF 207 (260)
Q Consensus 145 rIaIDIDGVLADfi~~fnk~~Ne---~yG~nltveD~~~-Y------d~-~---kv~gvs~EE~~~~l~ef~---e~~~F 207 (260)
.|.+||||||.|..+.+.+.+++ ++|.+.+.+++.. + ++ . +..+.+.++..+.+..|. ....-
T Consensus 3 ~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (220)
T TIGR03351 3 LVVLDMAGTTVDEDGLVYRALRQAVTAAGLSPTPEEVQSAWMGQSKIEAIRALLALDGADEAEAQAAFADFEERLAEAYD 82 (220)
T ss_pred EEEEecCCCeeccCchHHHHHHHHHHHcCCCCCHHHHHHhhcCCCHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhc
Confidence 68899999999855544444443 3677655433321 1 00 0 111333333322222222 22111
Q ss_pred CCCCCCcccHHHHHHHHhh-CCcEEEEeCCC
Q 024936 208 KTGIHPLPGAQKALHKLSR-YCLGNMLSRTI 237 (260)
Q Consensus 208 f~~LpPIPGAqEvL~kLse-~yEIyIVTAR~ 237 (260)
....+++||+.+.|+.|++ ++.+.|||+..
T Consensus 83 ~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~ 113 (220)
T TIGR03351 83 DGPPVALPGAEEAFRSLRSSGIKVALTTGFD 113 (220)
T ss_pred ccCCccCCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 1245899999999999965 79999999983
No 25
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=97.73 E-value=8.6e-06 Score=68.28 Aligned_cols=87 Identities=16% Similarity=0.152 Sum_probs=48.7
Q ss_pred EEEEeccchhHhHHHHHHHHHH--------HHhCCCccc-ccce-----ee-----eeeeecCCCHHHHHHHHHHHhcCc
Q 024936 145 VVAVDVDEVLGNFVSALNRFIA--------DRYSLNHSV-SEYH-----VY-----EFFKIWNCSRDEADLRVHEFFKTP 205 (260)
Q Consensus 145 rIaIDIDGVLADfi~~fnk~~N--------e~yG~nltv-eD~~-----~Y-----d~~kv~gvs~EE~~~~l~ef~e~~ 205 (260)
.|.+|+||||.|....+...++ +++|.+..- +.+. .+ .+...++.+.+++. +.+...
T Consensus 2 ~viFDlDGTL~ds~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~----~~~~~~ 77 (184)
T TIGR01993 2 VWFFDLDNTLYPHSAGIFLQIDRNITEFVAARLKLSEEEARVLRKDYYREYGTTLAGLMILHEIDADEYL----RYVHGR 77 (184)
T ss_pred eEEEeCCCCCCCCcccHHHHHHHHHHHHHHHHcCcCHHHHHHHHHHHHHHHchHHHHHHHhhCCCHHHHH----HHHhcc
Confidence 4889999999986544444333 244543221 0110 00 00011233443333 333332
Q ss_pred CCCCCCCCcccHHHHHHHHhhCCcEEEEeCCC
Q 024936 206 YFKTGIHPLPGAQKALHKLSRYCLGNMLSRTI 237 (260)
Q Consensus 206 ~Ff~~LpPIPGAqEvL~kLse~yEIyIVTAR~ 237 (260)
.-...++|.||+.+.|++|+ +.++|+|+..
T Consensus 78 ~~~~~~~~~~g~~~~L~~L~--~~~~i~Tn~~ 107 (184)
T TIGR01993 78 LPYEKLKPDPELRNLLLRLP--GRKIIFTNGD 107 (184)
T ss_pred CCHHhCCCCHHHHHHHHhCC--CCEEEEeCCC
Confidence 11236789999999999997 5899999874
No 26
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=97.72 E-value=0.00013 Score=68.17 Aligned_cols=85 Identities=15% Similarity=0.161 Sum_probs=58.0
Q ss_pred CCeEEEEeccchhHhHHHHHHHHHHHHhCCCcccccceeeeeeeecCCCHHHHHHHHHHHhcCcCCCCCCCCcccHHHHH
Q 024936 142 GKIVVAVDVDEVLGNFVSALNRFIADRYSLNHSVSEYHVYEFFKIWNCSRDEADLRVHEFFKTPYFKTGIHPLPGAQKAL 221 (260)
Q Consensus 142 ~KmrIaIDIDGVLADfi~~fnk~~Ne~yG~nltveD~~~Yd~~kv~gvs~EE~~~~l~ef~e~~~Ff~~LpPIPGAqEvL 221 (260)
+|-.|.+|||||+.+-+++.... .|| .+.+ + ++...+ ++... ...|++|++++-+
T Consensus 100 ~~dA~V~DIDET~LsN~pY~~~~---~~g----~e~~---------~--~~~w~~---~Wv~~----~~ApAlp~al~ly 154 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIPYYKKH---GYG----SEKF---------D--SELYDE---EFVNK----GEAPALPETLKNY 154 (275)
T ss_pred CCCEEEEECccccccCHHHHHHh---cCC----CCcC---------C--hhhhhH---HHHhc----ccCCCChHHHHHH
Confidence 46789999999999988874421 122 1111 1 111110 11222 2579999999999
Q ss_pred HHHhh-CCcEEEEeCCC--CchhHHHHHHH-hCC
Q 024936 222 HKLSR-YCLGNMLSRTI--PLNGLRSIIRD-YFR 251 (260)
Q Consensus 222 ~kLse-~yEIyIVTAR~--~~e~T~~WL~e-HFP 251 (260)
+.|.+ ++.|++||.|. ..+.|.+||++ .||
T Consensus 155 ~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~ 188 (275)
T TIGR01680 155 NKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYH 188 (275)
T ss_pred HHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCC
Confidence 99965 89999999994 56889999977 454
No 27
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=97.71 E-value=0.0001 Score=62.69 Aligned_cols=92 Identities=9% Similarity=0.108 Sum_probs=54.8
Q ss_pred EEEEeccchhHhHHHHH----HHHHHHHhC-CCcccccceeee---------------eeeecC----------CCHHHH
Q 024936 145 VVAVDVDEVLGNFVSAL----NRFIADRYS-LNHSVSEYHVYE---------------FFKIWN----------CSRDEA 194 (260)
Q Consensus 145 rIaIDIDGVLADfi~~f----nk~~Ne~yG-~nltveD~~~Yd---------------~~kv~g----------vs~EE~ 194 (260)
-|.+||||||.|..+.+ ++.+++ || ..++.+++..+- +.+.++ .+.+++
T Consensus 2 ~viFD~DGTLiDs~~~~~~a~~~~~~~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
T TIGR01548 2 ALVLDMDGVMADVSQSYRRAIIDTVEH-FGGVSVTHADIDHTKLAGNANNDWQLTHRLVVDGLNSASSERVRDAPTLEAV 80 (197)
T ss_pred ceEEecCceEEechHHHHHHHHHHHHH-HcCCCCCHHHHHHHHHccCccCchHHHHHHHHHhhhcccchhccCCccHHHH
Confidence 47899999999865544 444443 44 555543321100 011111 123445
Q ss_pred HHHHHHHhcCcCCC--------CCCCCcccHHHHHHHHhh-CCcEEEEeCCC
Q 024936 195 DLRVHEFFKTPYFK--------TGIHPLPGAQKALHKLSR-YCLGNMLSRTI 237 (260)
Q Consensus 195 ~~~l~ef~e~~~Ff--------~~LpPIPGAqEvL~kLse-~yEIyIVTAR~ 237 (260)
.+.+.+++....+. ....+.+++.++|+.|++ ++.+.|+|+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~g~~~~i~T~~~ 132 (197)
T TIGR01548 81 TAQFQALYQGVGYYRDLATLGLIEDETLLTPKGLLRELHRAPKGMAVVTGRP 132 (197)
T ss_pred HHHHHHHHcCCcccccccchhhhccccccCHHHHHHHHHHcCCcEEEECCCC
Confidence 55566666553221 134677888999999976 69999999983
No 28
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.67 E-value=7.1e-05 Score=67.96 Aligned_cols=97 Identities=12% Similarity=0.026 Sum_probs=57.3
Q ss_pred CCCCCeEEEEeccchhHhHHHHHHHHHH---HHhCCCccc-ccc---eeee---eee--------ecCCCHHHHH---HH
Q 024936 139 HLHGKIVVAVDVDEVLGNFVSALNRFIA---DRYSLNHSV-SEY---HVYE---FFK--------IWNCSRDEAD---LR 197 (260)
Q Consensus 139 ~~~~KmrIaIDIDGVLADfi~~fnk~~N---e~yG~nltv-eD~---~~Yd---~~k--------v~gvs~EE~~---~~ 197 (260)
|+.....|.+||||||.|..+.+.+.++ +.||.+... +.+ .... +.+ .++.+++... +.
T Consensus 9 ~~~~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 88 (272)
T PRK13223 9 PGRLPRLVMFDLDGTLVDSVPDLAAAVDRMLLELGRPPAGLEAVRHWVGNGAPVLVRRALAGSIDHDGVDDELAEQALAL 88 (272)
T ss_pred CCccCCEEEEcCCCccccCHHHHHHHHHHHHHHcCCCCCCHHHHHHHhChhHHHHHHHHhcccccccCCCHHHHHHHHHH
Confidence 3445568999999999986655555544 456766432 111 1100 000 1233333222 33
Q ss_pred HHHHhcCcCCCCCCCCcccHHHHHHHHhh-CCcEEEEeCCC
Q 024936 198 VHEFFKTPYFKTGIHPLPGAQKALHKLSR-YCLGNMLSRTI 237 (260)
Q Consensus 198 l~ef~e~~~Ff~~LpPIPGAqEvL~kLse-~yEIyIVTAR~ 237 (260)
+.+++... . ...++.||+.|+|+.|++ ++.++|+|+..
T Consensus 89 ~~~~~~~~-~-~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~ 127 (272)
T PRK13223 89 FMEAYADS-H-ELTVVYPGVRDTLKWLKKQGVEMALITNKP 127 (272)
T ss_pred HHHHHHhc-C-cCCccCCCHHHHHHHHHHCCCeEEEEECCc
Confidence 33333332 2 246789999999999976 78999999873
No 29
>PRK11587 putative phosphatase; Provisional
Probab=97.65 E-value=8.4e-05 Score=64.32 Aligned_cols=90 Identities=20% Similarity=0.263 Sum_probs=52.2
Q ss_pred EEEEeccchhHhHHHHHHHHHH---HHhCCCcccccceee----ee---eeec--CCCHHHHHHHHHHH--hcCcCCCCC
Q 024936 145 VVAVDVDEVLGNFVSALNRFIA---DRYSLNHSVSEYHVY----EF---FKIW--NCSRDEADLRVHEF--FKTPYFKTG 210 (260)
Q Consensus 145 rIaIDIDGVLADfi~~fnk~~N---e~yG~nltveD~~~Y----d~---~kv~--gvs~EE~~~~l~ef--~e~~~Ff~~ 210 (260)
.|.+||||||.|..+.+.+.++ ++||.+. +++..+ .. .+.+ +.++++..+.+..+ +.. .+...
T Consensus 5 ~viFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 81 (218)
T PRK11587 5 GFLFDLDGTLVDSLPAVERAWSNWADRHGIAP--DEVLNFIHGKQAITSLRHFMAGASEAEIQAEFTRLEQIEA-TDTEG 81 (218)
T ss_pred EEEEcCCCCcCcCHHHHHHHHHHHHHHcCCCH--HHHHHHHcCCCHHHHHHHHhccCCcHHHHHHHHHHHHHHH-hhhcC
Confidence 5899999999986655544433 3456542 221111 00 0111 12333333333321 111 12346
Q ss_pred CCCcccHHHHHHHHhh-CCcEEEEeCCC
Q 024936 211 IHPLPGAQKALHKLSR-YCLGNMLSRTI 237 (260)
Q Consensus 211 LpPIPGAqEvL~kLse-~yEIyIVTAR~ 237 (260)
.+++||+.+.|+.|++ ++.+.|||+..
T Consensus 82 ~~~~pg~~e~L~~L~~~g~~~~ivTn~~ 109 (218)
T PRK11587 82 ITALPGAIALLNHLNKLGIPWAIVTSGS 109 (218)
T ss_pred ceeCcCHHHHHHHHHHcCCcEEEEcCCC
Confidence 7899999999999965 79999999974
No 30
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=97.65 E-value=5e-05 Score=67.59 Aligned_cols=28 Identities=14% Similarity=0.103 Sum_probs=24.8
Q ss_pred CCCCcccHHHHHHHHhh-CCcEEEEeCCC
Q 024936 210 GIHPLPGAQKALHKLSR-YCLGNMLSRTI 237 (260)
Q Consensus 210 ~LpPIPGAqEvL~kLse-~yEIyIVTAR~ 237 (260)
.++++||+.|.|+.|.+ ++.+.|+|+..
T Consensus 106 ~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~ 134 (248)
T PLN02770 106 QLKPLNGLYKLKKWIEDRGLKRAAVTNAP 134 (248)
T ss_pred cCCcCccHHHHHHHHHHcCCeEEEEeCCC
Confidence 57899999999999965 79999999983
No 31
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=97.64 E-value=6.9e-05 Score=63.50 Aligned_cols=27 Identities=22% Similarity=0.169 Sum_probs=23.7
Q ss_pred CCCCcccHHHHHHHHhh-CCcEEEEeCC
Q 024936 210 GIHPLPGAQKALHKLSR-YCLGNMLSRT 236 (260)
Q Consensus 210 ~LpPIPGAqEvL~kLse-~yEIyIVTAR 236 (260)
...+.||+.++|++|++ ++.+.|+|+.
T Consensus 103 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~ 130 (203)
T TIGR02252 103 PWQVYPDAIKLLKDLRERGLILGVISNF 130 (203)
T ss_pred cceeCcCHHHHHHHHHHCCCEEEEEeCC
Confidence 34789999999999976 6899999986
No 32
>PLN02940 riboflavin kinase
Probab=97.60 E-value=0.00011 Score=70.32 Aligned_cols=107 Identities=17% Similarity=0.201 Sum_probs=62.2
Q ss_pred EEEEeccchhHhHHHHHHHHHH---HHhCCCcccccceee---e-------eeeecCC--CHHHHHHHHHHHhcCcCCCC
Q 024936 145 VVAVDVDEVLGNFVSALNRFIA---DRYSLNHSVSEYHVY---E-------FFKIWNC--SRDEADLRVHEFFKTPYFKT 209 (260)
Q Consensus 145 rIaIDIDGVLADfi~~fnk~~N---e~yG~nltveD~~~Y---d-------~~kv~gv--s~EE~~~~l~ef~e~~~Ff~ 209 (260)
.|.+|+||||.|+...+.+.++ ++||..++.+++..+ . +.+.++. +.+++.+.+.+++... + .
T Consensus 13 ~VIFDlDGTLvDt~~~~~~a~~~~~~~~G~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~ 90 (382)
T PLN02940 13 HVILDLDGTLLNTDGIVSDVLKAFLVKYGKQWDGREAQKIVGKTPLEAAATVVEDYGLPCSTDEFNSEITPLLSEQ-W-C 90 (382)
T ss_pred EEEECCcCcCCcCHHHHHHHHHHHHHHcCCCCCHHHHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHH-H-c
Confidence 4899999999987666655544 556776554332110 0 0011222 1233333333333322 2 3
Q ss_pred CCCCcccHHHHHHHHhh-CCcEEEEeCCCCc--hhH---HHHHHHhCCCC
Q 024936 210 GIHPLPGAQKALHKLSR-YCLGNMLSRTIPL--NGL---RSIIRDYFRRS 253 (260)
Q Consensus 210 ~LpPIPGAqEvL~kLse-~yEIyIVTAR~~~--e~T---~~WL~eHFPfi 253 (260)
++.+.||+.+.|++|.+ ++.+.|+|+.... ... ...+.++|.++
T Consensus 91 ~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~i 140 (382)
T PLN02940 91 NIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVI 140 (382)
T ss_pred cCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEE
Confidence 57899999999999966 6899999998321 111 23456667665
No 33
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=97.59 E-value=0.00028 Score=62.36 Aligned_cols=89 Identities=18% Similarity=0.181 Sum_probs=48.5
Q ss_pred EEEEeccchhHhHHHH----HHHHHHHHhCCCcccccceeeee---ee-------ecC----CCHHHHHHHHHHHhcCcC
Q 024936 145 VVAVDVDEVLGNFVSA----LNRFIADRYSLNHSVSEYHVYEF---FK-------IWN----CSRDEADLRVHEFFKTPY 206 (260)
Q Consensus 145 rIaIDIDGVLADfi~~----fnk~~Ne~yG~nltveD~~~Yd~---~k-------v~g----vs~EE~~~~l~ef~e~~~ 206 (260)
-+.+||||||.|+.+. +.+++.+ ||.+++.+.+..... ++ ..+ ....+......+ ....
T Consensus 4 avIFD~DGvLvDse~~~~~a~~~~~~~-~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 80 (221)
T COG0637 4 AVIFDMDGTLVDSEPLHARAWLEALKE-YGIEISDEEIRELHGGGIARIIDLLRKLAAGEDPADLAELERLLYE--AEAL 80 (221)
T ss_pred EEEEcCCCCcCcchHHHHHHHHHHHHH-cCCCCCHHHHHHHHCCChHHHHHHHHHHhcCCcccCHHHHHHHHHH--HHHh
Confidence 4889999999996554 4455444 787776543321100 00 001 111111111111 1112
Q ss_pred CCCCCCCcccHHHHHHHHhhC-CcEEEEeCC
Q 024936 207 FKTGIHPLPGAQKALHKLSRY-CLGNMLSRT 236 (260)
Q Consensus 207 Ff~~LpPIPGAqEvL~kLse~-yEIyIVTAR 236 (260)
+...++|+||+.+.|..|.+. -.+-++|+.
T Consensus 81 ~~~~~~~~pGv~~~l~~L~~~~i~~avaS~s 111 (221)
T COG0637 81 ELEGLKPIPGVVELLEQLKARGIPLAVASSS 111 (221)
T ss_pred hhcCCCCCccHHHHHHHHHhcCCcEEEecCC
Confidence 334789999999999999875 445555543
No 34
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=97.53 E-value=1.8e-05 Score=63.06 Aligned_cols=88 Identities=18% Similarity=0.294 Sum_probs=52.8
Q ss_pred EEEeccchhHhHHHHHHHH----HHHHhCCCccccccee---ee-------eeeecCCCHHHHHHHHHHHhcCcCCCCCC
Q 024936 146 VAVDVDEVLGNFVSALNRF----IADRYSLNHSVSEYHV---YE-------FFKIWNCSRDEADLRVHEFFKTPYFKTGI 211 (260)
Q Consensus 146 IaIDIDGVLADfi~~fnk~----~Ne~yG~nltveD~~~---Yd-------~~kv~gvs~EE~~~~l~ef~e~~~Ff~~L 211 (260)
|.+|+||||.|+...+-+. +.+.++.+.+.+++.. .. +.+.++...++..+.+.++ .....+
T Consensus 1 iifD~dgtL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 76 (176)
T PF13419_consen 1 IIFDLDGTLVDTDPAIFRALQRLALEEFGLEISAEELRELFGKSYEEALERLLERFGIDPEEIQELFREY----NLESKL 76 (176)
T ss_dssp EEEESBTTTEEHHHHHHHHHHHHHHHHTTHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHGGE
T ss_pred cEEECCCCcEeCHHHHHHHHHHHHHHHhCCCCCHHHHHHHhCCCHHHHHHHhhhccchhHHHHHHHhhhh----hhhhcc
Confidence 6899999999866643333 3455666644322210 00 0011122233333444443 222356
Q ss_pred CCcccHHHHHHHHh-hCCcEEEEeCCC
Q 024936 212 HPLPGAQKALHKLS-RYCLGNMLSRTI 237 (260)
Q Consensus 212 pPIPGAqEvL~kLs-e~yEIyIVTAR~ 237 (260)
+|.||+.+.|++|+ +++.++++|...
T Consensus 77 ~~~~~~~~~L~~l~~~~~~~~i~Sn~~ 103 (176)
T PF13419_consen 77 QPYPGVRELLERLKAKGIPLVIVSNGS 103 (176)
T ss_dssp EESTTHHHHHHHHHHTTSEEEEEESSE
T ss_pred chhhhhhhhhhhcccccceeEEeecCC
Confidence 89999999999998 689999999983
No 35
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=97.51 E-value=0.00017 Score=65.60 Aligned_cols=94 Identities=10% Similarity=0.009 Sum_probs=53.6
Q ss_pred CCeEEEEeccchhHhHH-----HHHHHHHHHHhCCCcccccce----eeeee----eec--CCCHHHH---HHHHHHHhc
Q 024936 142 GKIVVAVDVDEVLGNFV-----SALNRFIADRYSLNHSVSEYH----VYEFF----KIW--NCSRDEA---DLRVHEFFK 203 (260)
Q Consensus 142 ~KmrIaIDIDGVLADfi-----~~fnk~~Ne~yG~nltveD~~----~Yd~~----kv~--gvs~EE~---~~~l~ef~e 203 (260)
..+-|.+||||||+|.. ..+.+++ ++||.+++.+++. ..... .+. ..+.++. ...+..++.
T Consensus 23 ~~k~vIFDlDGTLvDS~~~~~~~a~~~~~-~~~G~~~~~~e~~~~~~G~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~ 101 (260)
T PLN03243 23 GWLGVVLEWEGVIVEDDSELERKAWRALA-EEEGKRPPPAFLLKRAEGMKNEQAISEVLCWSRDFLQMKRLAIRKEDLYE 101 (260)
T ss_pred CceEEEEeCCCceeCCchHHHHHHHHHHH-HHcCCCCCHHHHHHHhcCCCHHHHHHHHhccCCCHHHHHHHHHHHHHHHH
Confidence 45679999999999863 2344444 4578776544321 11000 111 1222211 111222221
Q ss_pred CcCCCCCCCCcccHHHHHHHHhh-CCcEEEEeCCC
Q 024936 204 TPYFKTGIHPLPGAQKALHKLSR-YCLGNMLSRTI 237 (260)
Q Consensus 204 ~~~Ff~~LpPIPGAqEvL~kLse-~yEIyIVTAR~ 237 (260)
.......+|+||+.+.|++|++ ++.+.|+|+..
T Consensus 102 -~~~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~ 135 (260)
T PLN03243 102 -YMQGGLYRLRPGSREFVQALKKHEIPIAVASTRP 135 (260)
T ss_pred -HHHccCcccCCCHHHHHHHHHHCCCEEEEEeCcC
Confidence 1111246789999999999976 69999999983
No 36
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=97.51 E-value=0.00011 Score=62.85 Aligned_cols=106 Identities=18% Similarity=0.133 Sum_probs=55.7
Q ss_pred CCCCeEEEEeccchhHhHHHHHHHHHHHHhCCCcccccceeeeeeeecCCCHHHH-HHHHHHHhcC-----cCCCCCCCC
Q 024936 140 LHGKIVVAVDVDEVLGNFVSALNRFIADRYSLNHSVSEYHVYEFFKIWNCSRDEA-DLRVHEFFKT-----PYFKTGIHP 213 (260)
Q Consensus 140 ~~~KmrIaIDIDGVLADfi~~fnk~~Ne~yG~nltveD~~~Yd~~kv~gvs~EE~-~~~l~ef~e~-----~~Ff~~LpP 213 (260)
..++.-|.+|+||||++.... . .+.+.+|......++..-.... ..+.++. .+.+..+-.. ..+...++|
T Consensus 11 ~~~~k~iiFD~DGTL~~~~~~-~-~l~~~~g~~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (219)
T TIGR00338 11 LRSKKLVVFDMDSTLINAETI-D-EIAKIAGVEEEVSEITERAMRG--ELDFKASLRERVALLKGLPVELLKEVRENLPL 86 (219)
T ss_pred hccCCEEEEeCcccCCCchHH-H-HHHHHhCCHHHHHHHHHHHHcC--CCCHHHHHHHHHHHhCCCCHHHHHHHHhcCCc
Confidence 345568999999999986532 2 3334567643332211000000 0111111 1111111000 011235789
Q ss_pred cccHHHHHHHHhh-CCcEEEEeCCCCchhHHHHHHHhCC
Q 024936 214 LPGAQKALHKLSR-YCLGNMLSRTIPLNGLRSIIRDYFR 251 (260)
Q Consensus 214 IPGAqEvL~kLse-~yEIyIVTAR~~~e~T~~WL~eHFP 251 (260)
.||+.+.|++|++ ++.++|||+.. ....+++.++++
T Consensus 87 ~~g~~~~l~~l~~~g~~~~IvS~~~--~~~~~~~l~~~~ 123 (219)
T TIGR00338 87 TEGAEELVKTLKEKGYKVAVISGGF--DLFAEHVKDKLG 123 (219)
T ss_pred CCCHHHHHHHHHHCCCEEEEECCCc--HHHHHHHHHHcC
Confidence 9999999999977 79999999863 233334444444
No 37
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=97.49 E-value=0.00013 Score=63.97 Aligned_cols=95 Identities=11% Similarity=0.074 Sum_probs=55.3
Q ss_pred CCeEEEEeccchhHhHHHHHHHHHHH---HhCCC-cccccceee---eee---e-ec-CCCH---HHHHHHHHHHhcCcC
Q 024936 142 GKIVVAVDVDEVLGNFVSALNRFIAD---RYSLN-HSVSEYHVY---EFF---K-IW-NCSR---DEADLRVHEFFKTPY 206 (260)
Q Consensus 142 ~KmrIaIDIDGVLADfi~~fnk~~Ne---~yG~n-ltveD~~~Y---d~~---k-v~-gvs~---EE~~~~l~ef~e~~~ 206 (260)
+-..|.+|+||||.|....+.+.+++ +||.+ ++.+++..+ ... + .+ ..++ ++..+.+.++|...
T Consensus 11 ~~k~viFD~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 89 (229)
T PRK13226 11 FPRAVLFDLDGTLLDSAPDMLATVNAMLAARGRAPITLAQLRPVVSKGARAMLAVAFPELDAAARDALIPEFLQRYEAL- 89 (229)
T ss_pred cCCEEEEcCcCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhhhHHHHHHHHHhccCChHHHHHHHHHHHHHHHHh-
Confidence 34479999999999866665555543 45643 333332111 000 0 11 1222 22223334444432
Q ss_pred CCCCCCCcccHHHHHHHHhh-CCcEEEEeCCC
Q 024936 207 FKTGIHPLPGAQKALHKLSR-YCLGNMLSRTI 237 (260)
Q Consensus 207 Ff~~LpPIPGAqEvL~kLse-~yEIyIVTAR~ 237 (260)
+....++.||+.+.|+.|++ ++.+.|+|+..
T Consensus 90 ~~~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~ 121 (229)
T PRK13226 90 IGTQSQLFDGVEGMLQRLECAGCVWGIVTNKP 121 (229)
T ss_pred hhhcCeeCCCHHHHHHHHHHCCCeEEEECCCC
Confidence 22357899999999999976 68999999974
No 38
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=97.39 E-value=0.00053 Score=58.47 Aligned_cols=103 Identities=12% Similarity=0.062 Sum_probs=56.1
Q ss_pred eEEEEeccchhHhHHHHHHHHHH---HHhCCCc-ccccce---eeeeee----ec-----CCCHHHHHHH---HHHHhcC
Q 024936 144 IVVAVDVDEVLGNFVSALNRFIA---DRYSLNH-SVSEYH---VYEFFK----IW-----NCSRDEADLR---VHEFFKT 204 (260)
Q Consensus 144 mrIaIDIDGVLADfi~~fnk~~N---e~yG~nl-tveD~~---~Yd~~k----v~-----gvs~EE~~~~---l~ef~e~ 204 (260)
..|.+|+||||+|..+.+...++ +.+|.+. +.+.+. .....+ .+ .++.++.... +.+++..
T Consensus 7 ~~iiFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (226)
T PRK13222 7 RAVAFDLDGTLVDSAPDLAAAVNAALAALGLPPAGEERVRTWVGNGADVLVERALTWAGREPDEELLEKLRELFDRHYAE 86 (226)
T ss_pred cEEEEcCCcccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhCccHHHHHHHHHhhccCCccHHHHHHHHHHHHHHHHH
Confidence 47999999999976544333332 3356542 222211 100001 11 2344444333 2333332
Q ss_pred cCCCCCCCCcccHHHHHHHHhh-CCcEEEEeCCCCchhHHHHHHH
Q 024936 205 PYFKTGIHPLPGAQKALHKLSR-YCLGNMLSRTIPLNGLRSIIRD 248 (260)
Q Consensus 205 ~~Ff~~LpPIPGAqEvL~kLse-~yEIyIVTAR~~~e~T~~WL~e 248 (260)
.. .....|.||+.+.|+.|++ ++.++|+|+.... ....|+++
T Consensus 87 ~~-~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~-~~~~~l~~ 129 (226)
T PRK13222 87 NV-AGGSRLYPGVKETLAALKAAGYPLAVVTNKPTP-FVAPLLEA 129 (226)
T ss_pred hc-cccCccCCCHHHHHHHHHHCCCeEEEEeCCCHH-HHHHHHHH
Confidence 22 1246899999999999976 6899999987432 22345543
No 39
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=97.38 E-value=0.00021 Score=63.01 Aligned_cols=94 Identities=13% Similarity=0.159 Sum_probs=59.2
Q ss_pred CCeEEEEeccchhH--hHHHHHHHHHHHHhCCCcc----------cc-----ccee--eee--ee-ecCCCHHHHHHHHH
Q 024936 142 GKIVVAVDVDEVLG--NFVSALNRFIADRYSLNHS----------VS-----EYHV--YEF--FK-IWNCSRDEADLRVH 199 (260)
Q Consensus 142 ~KmrIaIDIDGVLA--Dfi~~fnk~~Ne~yG~nlt----------ve-----D~~~--Yd~--~k-v~gvs~EE~~~~l~ 199 (260)
.+....+|+||||+ |....|+.+...++-..+. .. .... +.. +. ..|.+++++.+...
T Consensus 4 ~~~la~FDfDgTLt~~ds~~~fl~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~l~~~~~ 83 (210)
T TIGR01545 4 AKRIIFFDLDGTLHQQDMFGSFLRFLLRHLPLNALLVIPLLPIIAIALLIGGRAARWPMSLLLWACTFGHREAHLQDLEA 83 (210)
T ss_pred cCcEEEEcCCCCCccCccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHcCCCHHHHHHHHH
Confidence 55678899999999 6777777766544321000 00 0000 000 11 13888888887777
Q ss_pred HHhcCcCCCCCCCCcccHHHHHH-HHh-hCCcEEEEeCCC
Q 024936 200 EFFKTPYFKTGIHPLPGAQKALH-KLS-RYCLGNMLSRTI 237 (260)
Q Consensus 200 ef~e~~~Ff~~LpPIPGAqEvL~-kLs-e~yEIyIVTAR~ 237 (260)
+|.+...- ...+.|||.|.|+ .|+ +++.|+||||..
T Consensus 84 ~f~~~~~~--~~~l~pga~e~L~~~l~~~G~~v~IvSas~ 121 (210)
T TIGR01545 84 DFVAAFRD--KVTAFPLVAERLRQYLESSDADIWLITGSP 121 (210)
T ss_pred HHHHHHHH--hCCCCccHHHHHHHHHHhCCCEEEEEcCCc
Confidence 76553311 2357899999995 787 489999999873
No 40
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=97.37 E-value=0.00013 Score=70.65 Aligned_cols=28 Identities=11% Similarity=0.142 Sum_probs=24.6
Q ss_pred CCCCcccHHHHHHHHhh-CCcEEEEeCCC
Q 024936 210 GIHPLPGAQKALHKLSR-YCLGNMLSRTI 237 (260)
Q Consensus 210 ~LpPIPGAqEvL~kLse-~yEIyIVTAR~ 237 (260)
..+|.||+.|.|+.|++ ++.+.|+|+..
T Consensus 328 ~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~ 356 (459)
T PRK06698 328 KGALYPNVKEIFTYIKENNCSIYIASNGL 356 (459)
T ss_pred CCCcCCCHHHHHHHHHHCCCeEEEEeCCc
Confidence 46889999999999966 78999999983
No 41
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=97.36 E-value=0.00064 Score=58.05 Aligned_cols=27 Identities=11% Similarity=0.086 Sum_probs=24.2
Q ss_pred CCCCcccHHHHHHHHhh-CCcEEEEeCC
Q 024936 210 GIHPLPGAQKALHKLSR-YCLGNMLSRT 236 (260)
Q Consensus 210 ~LpPIPGAqEvL~kLse-~yEIyIVTAR 236 (260)
..++.||+.+.|++|++ ++.++|+|+.
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~ 119 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNN 119 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCC
Confidence 46789999999999976 6999999987
No 42
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=97.35 E-value=0.00018 Score=65.92 Aligned_cols=26 Identities=12% Similarity=0.063 Sum_probs=23.8
Q ss_pred CCCcccHHHHHHHHhh-CCcEEEEeCC
Q 024936 211 IHPLPGAQKALHKLSR-YCLGNMLSRT 236 (260)
Q Consensus 211 LpPIPGAqEvL~kLse-~yEIyIVTAR 236 (260)
++|+||+.+.|++|.+ ++.+.|||+.
T Consensus 143 ~~l~pGv~elL~~L~~~g~~l~IvTn~ 169 (286)
T PLN02779 143 LPLRPGVLRLMDEALAAGIKVAVCSTS 169 (286)
T ss_pred CCchhhHHHHHHHHHHCCCeEEEEeCC
Confidence 6899999999999976 7999999987
No 43
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=97.33 E-value=0.0001 Score=62.97 Aligned_cols=28 Identities=14% Similarity=0.241 Sum_probs=24.8
Q ss_pred CCCCcccHHHHHHHHhh-CCcEEEEeCCC
Q 024936 210 GIHPLPGAQKALHKLSR-YCLGNMLSRTI 237 (260)
Q Consensus 210 ~LpPIPGAqEvL~kLse-~yEIyIVTAR~ 237 (260)
.+++.||+.+.|++|++ ++.+.|||+..
T Consensus 92 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~ 120 (221)
T TIGR02253 92 YLRVYPGVRDTLMELRESGYRLGIITDGL 120 (221)
T ss_pred hCCCCCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 46899999999999977 58999999984
No 44
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=97.32 E-value=0.00036 Score=57.15 Aligned_cols=28 Identities=25% Similarity=0.351 Sum_probs=24.8
Q ss_pred CCCcccHHHHHHHHhh-CCcEEEEeCCCC
Q 024936 211 IHPLPGAQKALHKLSR-YCLGNMLSRTIP 238 (260)
Q Consensus 211 LpPIPGAqEvL~kLse-~yEIyIVTAR~~ 238 (260)
+++.||+.+.|++|++ ++.++|+|+...
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~ 112 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPR 112 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCch
Confidence 6889999999999976 799999999843
No 45
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=97.31 E-value=0.00018 Score=69.75 Aligned_cols=109 Identities=12% Similarity=0.001 Sum_probs=59.4
Q ss_pred eEEEEeccchhHhHHHH----HHHHHHHHhCCCcccccc----eeeeee---e-e--cCCCHHHHH---HHHHHHhcCcC
Q 024936 144 IVVAVDVDEVLGNFVSA----LNRFIADRYSLNHSVSEY----HVYEFF---K-I--WNCSRDEAD---LRVHEFFKTPY 206 (260)
Q Consensus 144 mrIaIDIDGVLADfi~~----fnk~~Ne~yG~nltveD~----~~Yd~~---k-v--~gvs~EE~~---~~l~ef~e~~~ 206 (260)
..|++||||||.|..+. ....+-+++|.+.+.+++ ...... + + +..++++.. +.+.++|.+..
T Consensus 132 ~~VIFDlDGTLIDS~~~i~~~a~~~l~~e~G~~~~~~e~~~~~~G~~~~~~l~~ll~~~~~~~~~e~l~~~~~~~y~~~~ 211 (381)
T PLN02575 132 LGAIFEWEGVIIEDNPDLENQAWLTLAQEEGKSPPPAFILRRVEGMKNEQAISEVLCWSRDPAELRRMATRKEEIYQALQ 211 (381)
T ss_pred CEEEEcCcCcceeCHHHHHHHHHHHHHHHcCCCCCHHHHHHHhcCCCHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHh
Confidence 46899999999975442 333344567876554322 111101 1 1 111222222 22233332221
Q ss_pred CCCCCCCcccHHHHHHHHhh-CCcEEEEeCCCCc--h--hHHHHHHHhCCCC
Q 024936 207 FKTGIHPLPGAQKALHKLSR-YCLGNMLSRTIPL--N--GLRSIIRDYFRRS 253 (260)
Q Consensus 207 Ff~~LpPIPGAqEvL~kLse-~yEIyIVTAR~~~--e--~T~~WL~eHFPfi 253 (260)
.....++||+.|.|+.|.+ ++.+.|+|+.... + ....-|..+|..|
T Consensus 212 -~~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~I 262 (381)
T PLN02575 212 -GGIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVI 262 (381)
T ss_pred -ccCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEE
Confidence 1245889999999999966 6899999998421 1 1222345566554
No 46
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=97.30 E-value=0.00032 Score=59.34 Aligned_cols=29 Identities=34% Similarity=0.410 Sum_probs=25.2
Q ss_pred CCCCCcccHHHHHHHHhhCCcEEEEeCCC
Q 024936 209 TGIHPLPGAQKALHKLSRYCLGNMLSRTI 237 (260)
Q Consensus 209 ~~LpPIPGAqEvL~kLse~yEIyIVTAR~ 237 (260)
..++++||+.+.|+.|++.+.++|||+..
T Consensus 65 ~~~~~~pg~~e~L~~L~~~~~~~IvS~~~ 93 (205)
T PRK13582 65 ATLDPLPGAVEFLDWLRERFQVVILSDTF 93 (205)
T ss_pred HhCCCCCCHHHHHHHHHhcCCEEEEeCCc
Confidence 35788999999999998779999999873
No 47
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=97.25 E-value=0.0011 Score=57.76 Aligned_cols=42 Identities=5% Similarity=-0.032 Sum_probs=32.5
Q ss_pred CCCCcccHHHHHHHHhh-CCcEEEEeCCCCchhHHHHHHHhCCC
Q 024936 210 GIHPLPGAQKALHKLSR-YCLGNMLSRTIPLNGLRSIIRDYFRR 252 (260)
Q Consensus 210 ~LpPIPGAqEvL~kLse-~yEIyIVTAR~~~e~T~~WL~eHFPf 252 (260)
.+++.||+.|.|+.|++ ++.++|||+... .....+|+++++.
T Consensus 72 ~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~-~~i~~il~~~~~~ 114 (219)
T PRK09552 72 TAEIREGFHEFVQFVKENNIPFYVVSGGMD-FFVYPLLQGLIPK 114 (219)
T ss_pred CCCcCcCHHHHHHHHHHcCCeEEEECCCcH-HHHHHHHHHhCCc
Confidence 56889999999999976 699999999853 3455677666443
No 48
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=97.25 E-value=0.00043 Score=59.51 Aligned_cols=104 Identities=18% Similarity=0.247 Sum_probs=57.9
Q ss_pred eEEEEeccchhHhHH----HHHHHHHHHHhCCCccccccee-------eeeee----ecCC--CHHHHHHHHHHHhcCcC
Q 024936 144 IVVAVDVDEVLGNFV----SALNRFIADRYSLNHSVSEYHV-------YEFFK----IWNC--SRDEADLRVHEFFKTPY 206 (260)
Q Consensus 144 mrIaIDIDGVLADfi----~~fnk~~Ne~yG~nltveD~~~-------Yd~~k----v~gv--s~EE~~~~l~ef~e~~~ 206 (260)
..|.+|+||||.|.. ..+.+.+. +||.+++.+++.. +++++ .++. +.+++...+.+.+.. .
T Consensus 5 ~~viFD~DGTL~d~~~~~~~a~~~~~~-~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 82 (221)
T PRK10563 5 EAVFFDCDGTLVDSEVICSRAYVTMFA-EFGITLSLEEVFKRFKGVKLYEIIDIISKEHGVTLAKAELEPVYRAEVAR-L 82 (221)
T ss_pred CEEEECCCCCCCCChHHHHHHHHHHHH-HcCCCCCHHHHHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH-H
Confidence 368999999999854 34444443 4687655433211 11111 1222 233333333322221 1
Q ss_pred CCCCCCCcccHHHHHHHHhhCCcEEEEeCCCC--chh--HHHHHHHhCC
Q 024936 207 FKTGIHPLPGAQKALHKLSRYCLGNMLSRTIP--LNG--LRSIIRDYFR 251 (260)
Q Consensus 207 Ff~~LpPIPGAqEvL~kLse~yEIyIVTAR~~--~e~--T~~WL~eHFP 251 (260)
+...+++.||+.+.|+.|. +.+.|||+... ... +...|..+|+
T Consensus 83 ~~~~~~~~~gv~~~L~~L~--~~~~ivTn~~~~~~~~~l~~~~l~~~F~ 129 (221)
T PRK10563 83 FDSELEPIAGANALLESIT--VPMCVVSNGPVSKMQHSLGKTGMLHYFP 129 (221)
T ss_pred HHccCCcCCCHHHHHHHcC--CCEEEEeCCcHHHHHHHHHhcChHHhCc
Confidence 1235789999999999994 89999998732 222 2234566675
No 49
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=97.25 E-value=0.00039 Score=59.07 Aligned_cols=28 Identities=21% Similarity=0.337 Sum_probs=24.9
Q ss_pred CCCCcccHHHHHHHHhhCCcEEEEeCCC
Q 024936 210 GIHPLPGAQKALHKLSRYCLGNMLSRTI 237 (260)
Q Consensus 210 ~LpPIPGAqEvL~kLse~yEIyIVTAR~ 237 (260)
...+.||+.+.|++|++.+.+.|+|+..
T Consensus 95 ~~~~~~g~~~~L~~l~~~~~~~i~Sn~~ 122 (224)
T TIGR02254 95 GHQLLPGAFELMENLQQKFRLYIVTNGV 122 (224)
T ss_pred cCeeCccHHHHHHHHHhcCcEEEEeCCc
Confidence 4678999999999998779999999983
No 50
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=97.24 E-value=0.00039 Score=58.11 Aligned_cols=28 Identities=18% Similarity=0.011 Sum_probs=24.7
Q ss_pred CCCCcccHHHHHHHHhh-CCcEEEEeCCC
Q 024936 210 GIHPLPGAQKALHKLSR-YCLGNMLSRTI 237 (260)
Q Consensus 210 ~LpPIPGAqEvL~kLse-~yEIyIVTAR~ 237 (260)
.+++.||+.|.|+.|.+ ++.++|||+..
T Consensus 78 ~~~~~~g~~e~l~~l~~~g~~~~IvS~~~ 106 (201)
T TIGR01491 78 EISLRDYAEELVRWLKEKGLKTAIVSGGI 106 (201)
T ss_pred hCCCCccHHHHHHHHHHCCCEEEEEeCCc
Confidence 56889999999999975 79999999873
No 51
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.24 E-value=0.0004 Score=52.49 Aligned_cols=39 Identities=13% Similarity=0.219 Sum_probs=30.6
Q ss_pred CCCCcccHHHHHHHHhh-CCcEEEEeCCCCchhHHHHHHHh
Q 024936 210 GIHPLPGAQKALHKLSR-YCLGNMLSRTIPLNGLRSIIRDY 249 (260)
Q Consensus 210 ~LpPIPGAqEvL~kLse-~yEIyIVTAR~~~e~T~~WL~eH 249 (260)
...+.|++.+.|++|.+ ++.|+|+|++. ......|++++
T Consensus 22 ~~~~~~~~~~~l~~l~~~g~~i~ivS~~~-~~~~~~~~~~~ 61 (139)
T cd01427 22 ELELYPGVKEALKELKEKGIKLALATNKS-RREVLELLEEL 61 (139)
T ss_pred cCCcCcCHHHHHHHHHHCCCeEEEEeCch-HHHHHHHHHHc
Confidence 56889999999999987 58999999986 34445566553
No 52
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=97.23 E-value=0.00039 Score=58.91 Aligned_cols=35 Identities=17% Similarity=0.123 Sum_probs=30.5
Q ss_pred cccHHHHHHHHhh-CCcEEEEeCC--CCchhHHHHHHH
Q 024936 214 LPGAQKALHKLSR-YCLGNMLSRT--IPLNGLRSIIRD 248 (260)
Q Consensus 214 IPGAqEvL~kLse-~yEIyIVTAR--~~~e~T~~WL~e 248 (260)
-|++.+++++|++ +|.|+|+|+| ...+.|..||++
T Consensus 29 ~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~ 66 (157)
T smart00775 29 HPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQ 66 (157)
T ss_pred CHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHH
Confidence 3899999999977 7999999999 445678999988
No 53
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=97.20 E-value=0.00086 Score=59.08 Aligned_cols=28 Identities=11% Similarity=-0.098 Sum_probs=25.0
Q ss_pred CCCCCcccHHHHHHHHhh-CCcEEEEeCC
Q 024936 209 TGIHPLPGAQKALHKLSR-YCLGNMLSRT 236 (260)
Q Consensus 209 ~~LpPIPGAqEvL~kLse-~yEIyIVTAR 236 (260)
..+.++||+.|.|+.|++ ++.++|+|+.
T Consensus 90 ~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~ 118 (224)
T PRK14988 90 PRAVLREDTVPFLEALKASGKRRILLTNA 118 (224)
T ss_pred ccCCcCCCHHHHHHHHHhCCCeEEEEeCc
Confidence 457899999999999977 6899999996
No 54
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=97.19 E-value=0.00043 Score=57.08 Aligned_cols=28 Identities=11% Similarity=-0.098 Sum_probs=24.5
Q ss_pred CCCCcccHHHHHHHHhh-CCcEEEEeCCC
Q 024936 210 GIHPLPGAQKALHKLSR-YCLGNMLSRTI 237 (260)
Q Consensus 210 ~LpPIPGAqEvL~kLse-~yEIyIVTAR~ 237 (260)
.+++.||+.+.|+.|.+ ++.++|+|+..
T Consensus 70 ~~~l~~g~~~ll~~l~~~g~~~~i~S~~~ 98 (188)
T TIGR01489 70 SAPIDPGFKEFIAFIKEHGIDFIVISDGN 98 (188)
T ss_pred hCCCCccHHHHHHHHHHcCCcEEEEeCCc
Confidence 47899999999999976 68999999874
No 55
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=97.16 E-value=0.00086 Score=59.62 Aligned_cols=84 Identities=19% Similarity=0.148 Sum_probs=56.2
Q ss_pred CCeEEEEeccchhHhHHHHHHHHHHHHhCCCcccccce-----e-eeee--------eecCCCHHHHHHHHHHHhcCcCC
Q 024936 142 GKIVVAVDVDEVLGNFVSALNRFIADRYSLNHSVSEYH-----V-YEFF--------KIWNCSRDEADLRVHEFFKTPYF 207 (260)
Q Consensus 142 ~KmrIaIDIDGVLADfi~~fnk~~Ne~yG~nltveD~~-----~-Yd~~--------kv~gvs~EE~~~~l~ef~e~~~F 207 (260)
++..+.+|||+||++ ....+++++..|....+...+ . +++. .+-|.+.++..++..+|
T Consensus 4 ~~~L~vFD~D~TLi~--~~~~~~~~~~~g~~~~v~~~t~~~~~~~~~~~~~~~~~v~~l~g~~~~~v~~~~~~~------ 75 (212)
T COG0560 4 MKKLAVFDLDGTLIN--AELIDELARGAGVGEEVLAITERAMRGELDFEESLRLRVALLKGLPVEVLEEVREEF------ 75 (212)
T ss_pred ccceEEEecccchhh--HHHHHHHHHHhCCHHHHHHHHHHHhcccccHHHHHHHHHHHhCCCCHHHHHHHHHhc------
Confidence 566899999999998 555666666676654332211 1 1111 12255555555444442
Q ss_pred CCCCCCcccHHHHHHHHhh-CCcEEEEeCC
Q 024936 208 KTGIHPLPGAQKALHKLSR-YCLGNMLSRT 236 (260)
Q Consensus 208 f~~LpPIPGAqEvL~kLse-~yEIyIVTAR 236 (260)
+++.|||.|.++.|++ ++.|.|||+-
T Consensus 76 ---~~l~~ga~elv~~lk~~G~~v~iiSgg 102 (212)
T COG0560 76 ---LRLTPGAEELVAALKAAGAKVVIISGG 102 (212)
T ss_pred ---CcCCccHHHHHHHHHHCCCEEEEEcCC
Confidence 6788999999999977 7999999987
No 56
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=97.16 E-value=0.00024 Score=62.73 Aligned_cols=28 Identities=11% Similarity=0.055 Sum_probs=25.1
Q ss_pred CCCCcccHHHHHHHHhhCCcEEEEeCCC
Q 024936 210 GIHPLPGAQKALHKLSRYCLGNMLSRTI 237 (260)
Q Consensus 210 ~LpPIPGAqEvL~kLse~yEIyIVTAR~ 237 (260)
.+++.||+.++|++|++++.+.|+|+-.
T Consensus 111 ~~~~~~gv~~~L~~L~~~~~l~i~Tn~~ 138 (238)
T PRK10748 111 RIDVPQATHDTLKQLAKKWPLVAITNGN 138 (238)
T ss_pred cCCCCccHHHHHHHHHcCCCEEEEECCC
Confidence 4688899999999998889999999964
No 57
>PLN02954 phosphoserine phosphatase
Probab=97.09 E-value=0.001 Score=57.25 Aligned_cols=84 Identities=21% Similarity=0.167 Sum_probs=47.6
Q ss_pred eEEEEeccchhHhHHHHHHHHHHHHhCCCcccccceeeeeeeecC--CCHHHH-----------HHHHHHHhcCcCCCCC
Q 024936 144 IVVAVDVDEVLGNFVSALNRFIADRYSLNHSVSEYHVYEFFKIWN--CSRDEA-----------DLRVHEFFKTPYFKTG 210 (260)
Q Consensus 144 mrIaIDIDGVLADfi~~fnk~~Ne~yG~nltveD~~~Yd~~kv~g--vs~EE~-----------~~~l~ef~e~~~Ff~~ 210 (260)
..|.+|+||||++... ...+.+.||.....+++.. ++.+ ++-.+. .+.+.+++++. .
T Consensus 13 k~viFDfDGTL~~~~~--~~~~~~~~g~~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 82 (224)
T PLN02954 13 DAVCFDVDSTVCVDEG--IDELAEFCGAGEAVAEWTA----KAMGGSVPFEEALAARLSLFKPSLSQVEEFLEKR----P 82 (224)
T ss_pred CEEEEeCCCcccchHH--HHHHHHHcCChHHHHHHHH----HHHCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHc----c
Confidence 4688999999997532 2444455665432222110 0011 111111 01123333331 2
Q ss_pred CCCcccHHHHHHHHhh-CCcEEEEeCCC
Q 024936 211 IHPLPGAQKALHKLSR-YCLGNMLSRTI 237 (260)
Q Consensus 211 LpPIPGAqEvL~kLse-~yEIyIVTAR~ 237 (260)
..+.||+.|.|+.|++ ++.++|||+..
T Consensus 83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~ 110 (224)
T PLN02954 83 PRLSPGIPELVKKLRARGTDVYLVSGGF 110 (224)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCc
Confidence 4578999999999966 68999999984
No 58
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=97.05 E-value=0.0021 Score=55.86 Aligned_cols=96 Identities=11% Similarity=0.072 Sum_probs=54.6
Q ss_pred EEEeccchhH--hHHHHHHHH---------HHHHhCCCcccccceeeeeeeecCCCHHHHHHHHHHHhcCcCCCCCCCCc
Q 024936 146 VAVDVDEVLG--NFVSALNRF---------IADRYSLNHSVSEYHVYEFFKIWNCSRDEADLRVHEFFKTPYFKTGIHPL 214 (260)
Q Consensus 146 IaIDIDGVLA--Dfi~~fnk~---------~Ne~yG~nltveD~~~Yd~~kv~gvs~EE~~~~l~ef~e~~~Ff~~LpPI 214 (260)
|++|.||||+ |....+++. .++.+.-.++..+.. ....+.+..+..+ .+.+++.. .+++.
T Consensus 2 ~~fDFDgTit~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~e~~-~~~~~~~~~~~~~---~~~~~~~~-----~~~l~ 72 (214)
T TIGR03333 2 IICDFDGTITNNDNIISIMKQFAPPEWEALKDGVLSKTLSIQEGV-GRMFGLLPSSLKE---EITSFVLE-----TAEIR 72 (214)
T ss_pred EEeccCCCCCcchhHHHHHHHhCcHHHHHHHHHHHcCCccHHHHH-HHHHhhCCCchHH---HHHHHHHh-----cCccc
Confidence 7899999999 333332222 122222233333321 1122344444311 23343332 36889
Q ss_pred ccHHHHHHHHhh-CCcEEEEeCCCCchhHHHHHHHhCC
Q 024936 215 PGAQKALHKLSR-YCLGNMLSRTIPLNGLRSIIRDYFR 251 (260)
Q Consensus 215 PGAqEvL~kLse-~yEIyIVTAR~~~e~T~~WL~eHFP 251 (260)
||+.+.|+.|.+ ++.++|||+... .....||+++.+
T Consensus 73 pg~~e~l~~l~~~g~~~~IvS~~~~-~~i~~il~~~~~ 109 (214)
T TIGR03333 73 EGFREFVAFINEHGIPFYVISGGMD-FFVYPLLEGIVE 109 (214)
T ss_pred ccHHHHHHHHHHCCCeEEEECCCcH-HHHHHHHHhhCC
Confidence 999999999977 689999999843 445556766544
No 59
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=97.05 E-value=0.0016 Score=55.04 Aligned_cols=28 Identities=21% Similarity=0.210 Sum_probs=24.9
Q ss_pred CCCCcccHHHHHHHHhh-CCcEEEEeCCC
Q 024936 210 GIHPLPGAQKALHKLSR-YCLGNMLSRTI 237 (260)
Q Consensus 210 ~LpPIPGAqEvL~kLse-~yEIyIVTAR~ 237 (260)
.+++.||+.++|++|++ ++.++|+|+..
T Consensus 90 ~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~ 118 (198)
T TIGR01428 90 RLPPHPDVPAGLRALKERGYRLAILSNGS 118 (198)
T ss_pred cCCCCCCHHHHHHHHHHCCCeEEEEeCCC
Confidence 56889999999999988 59999999873
No 60
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=96.85 E-value=0.0032 Score=51.71 Aligned_cols=38 Identities=13% Similarity=0.075 Sum_probs=28.7
Q ss_pred CCCCcccHHHHHHHHhh-CCcEEEEeCCCCchhHHHHHHH
Q 024936 210 GIHPLPGAQKALHKLSR-YCLGNMLSRTIPLNGLRSIIRD 248 (260)
Q Consensus 210 ~LpPIPGAqEvL~kLse-~yEIyIVTAR~~~e~T~~WL~e 248 (260)
.+++.||+.+.|+.|.+ ++.++|||+... ...+.|+++
T Consensus 71 ~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~-~~i~~~~~~ 109 (177)
T TIGR01488 71 QVALRPGARELISWLKERGIDTVIVSGGFD-FFVEPVAEK 109 (177)
T ss_pred cCCcCcCHHHHHHHHHHCCCEEEEECCCcH-HHHHHHHHH
Confidence 45778999999999966 689999999843 334455554
No 61
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=96.81 E-value=0.0014 Score=54.52 Aligned_cols=41 Identities=7% Similarity=-0.136 Sum_probs=33.4
Q ss_pred CCcccHHHHHHHHh-hCCcEEEEeCCCC--c------------hhHHHHHHHh-CCC
Q 024936 212 HPLPGAQKALHKLS-RYCLGNMLSRTIP--L------------NGLRSIIRDY-FRR 252 (260)
Q Consensus 212 pPIPGAqEvL~kLs-e~yEIyIVTAR~~--~------------e~T~~WL~eH-FPf 252 (260)
+|.+++.++|++|. ++++|+|+|||.. . +.|.+||++| +|+
T Consensus 24 ~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~ipY 80 (126)
T TIGR01689 24 APILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHNVPY 80 (126)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHHcCCCC
Confidence 57799999999994 5899999999932 2 4899999885 444
No 62
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=96.81 E-value=0.0035 Score=58.45 Aligned_cols=93 Identities=12% Similarity=0.065 Sum_probs=58.9
Q ss_pred CCCCeEEEEeccchhHhHHHHHHHHHHHHhCCCcccccceeeeeeeecCCCHHHHHHHHHHHhcCcCCCCCCCCcccHHH
Q 024936 140 LHGKIVVAVDVDEVLGNFVSALNRFIADRYSLNHSVSEYHVYEFFKIWNCSRDEADLRVHEFFKTPYFKTGIHPLPGAQK 219 (260)
Q Consensus 140 ~~~KmrIaIDIDGVLADfi~~fnk~~Ne~yG~nltveD~~~Yd~~kv~gvs~EE~~~~l~ef~e~~~Ff~~LpPIPGAqE 219 (260)
..+++.|.+|||||+.|..++-.-.. ..+..+++ +. |+.|.+.. .+.|+|||.|
T Consensus 76 k~K~~aVvlDlDETvLdNs~Yqgy~v--~nnk~f~p----------------e~----Wd~wV~a~----~sk~vpGA~e 129 (274)
T COG2503 76 KGKKKAVVLDLDETVLDNSAYQGYQV--LNNKGFTP----------------ET----WDKWVQAK----KSKAVPGAVE 129 (274)
T ss_pred cCCCceEEEecchHhhcCccccchhh--hcCCCCCc----------------cc----hHHHHhhc----ccccCccHHH
Confidence 34566899999999998665532221 12333333 22 23333333 5689999999
Q ss_pred HHHHHhh-CCcEEEEeCC---CCchhHHHHHH-HhCCCCccccc
Q 024936 220 ALHKLSR-YCLGNMLSRT---IPLNGLRSIIR-DYFRRSTLATT 258 (260)
Q Consensus 220 vL~kLse-~yEIyIVTAR---~~~e~T~~WL~-eHFPfi~~~~~ 258 (260)
-|+--.+ +-.||+||.| +....|.+=|+ +-||.....+.
T Consensus 130 Fl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~~~ 173 (274)
T COG2503 130 FLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLESHL 173 (274)
T ss_pred HHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccccce
Confidence 9998855 7899999999 33455555444 55776655443
No 63
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=96.81 E-value=0.0016 Score=70.12 Aligned_cols=93 Identities=19% Similarity=0.231 Sum_probs=52.4
Q ss_pred EEEEeccchhHhHHHHHHHHHH---HHhCCCcccccceee------eee----eecC---CCHHHHHHHHHHHhcCcCC-
Q 024936 145 VVAVDVDEVLGNFVSALNRFIA---DRYSLNHSVSEYHVY------EFF----KIWN---CSRDEADLRVHEFFKTPYF- 207 (260)
Q Consensus 145 rIaIDIDGVLADfi~~fnk~~N---e~yG~nltveD~~~Y------d~~----kv~g---vs~EE~~~~l~ef~e~~~F- 207 (260)
-|.+||||||+|..+.+.+.++ +++|.+++.+++..+ +++ +.++ .+.++..+.+.+.+...+.
T Consensus 77 aVIFDlDGTLiDS~~~~~~a~~~~~~~~G~~it~e~~~~~~G~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 156 (1057)
T PLN02919 77 AVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFVPFMGTGEANFLGGVASVKGVKGFDPDAAKKRFFEIYLEKYAK 156 (1057)
T ss_pred EEEECCCCCeEeChHHHHHHHHHHHHHcCCCCCHHHHHHHhCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhhh
Confidence 5899999999986555544444 346777654433111 000 1112 2223322222222222111
Q ss_pred CCCCCCcccHHHHHHHHhh-CCcEEEEeCCC
Q 024936 208 KTGIHPLPGAQKALHKLSR-YCLGNMLSRTI 237 (260)
Q Consensus 208 f~~LpPIPGAqEvL~kLse-~yEIyIVTAR~ 237 (260)
.....++||+.+.|++|++ ++.+.|+|+..
T Consensus 157 ~~~~~~~pG~~elL~~Lk~~G~~l~IvSn~~ 187 (1057)
T PLN02919 157 PNSGIGFPGALELITQCKNKGLKVAVASSAD 187 (1057)
T ss_pred cccCccCccHHHHHHHHHhCCCeEEEEeCCc
Confidence 1122478999999999966 79999999873
No 64
>PLN02811 hydrolase
Probab=96.80 E-value=0.0023 Score=55.58 Aligned_cols=86 Identities=13% Similarity=0.069 Sum_probs=49.9
Q ss_pred ccchhHhHHHHHHHHHH---HHhCCCcccccceee----------eeeeecCC----CHHHHHHHHHHHhcCcCCCCCCC
Q 024936 150 VDEVLGNFVSALNRFIA---DRYSLNHSVSEYHVY----------EFFKIWNC----SRDEADLRVHEFFKTPYFKTGIH 212 (260)
Q Consensus 150 IDGVLADfi~~fnk~~N---e~yG~nltveD~~~Y----------d~~kv~gv----s~EE~~~~l~ef~e~~~Ff~~Lp 212 (260)
|||||+|....+.+.++ ++||.+++.+.+..+ .+.+.++. ..++..+..+.++... ....+
T Consensus 1 ~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 78 (220)
T PLN02811 1 MDGLLLDTEKFYTEVQEKILARYGKTFDWSLKAKMMGKKAIEAARIFVEESGLSDSLSPEDFLVEREAMLQDL--FPTSD 78 (220)
T ss_pred CCCcceecHHHHHHHHHHHHHHcCCCCCHHHHHHccCCCHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHH--HhhCC
Confidence 79999986555544444 556766543211100 01111222 2233333333333322 23578
Q ss_pred CcccHHHHHHHHhh-CCcEEEEeCCC
Q 024936 213 PLPGAQKALHKLSR-YCLGNMLSRTI 237 (260)
Q Consensus 213 PIPGAqEvL~kLse-~yEIyIVTAR~ 237 (260)
++||+.+.|+.|++ ++.+.|||+..
T Consensus 79 l~~gv~e~l~~L~~~g~~~~i~S~~~ 104 (220)
T PLN02811 79 LMPGAERLVRHLHAKGIPIAIATGSH 104 (220)
T ss_pred CCccHHHHHHHHHHCCCcEEEEeCCc
Confidence 89999999999977 79999999873
No 65
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=96.68 E-value=0.0049 Score=54.24 Aligned_cols=79 Identities=19% Similarity=0.204 Sum_probs=47.0
Q ss_pred EEEeccchhHhHHHHHHHHHHHHhCCC-ccc--c---cceeeee-----eeecCCCHHHHHHHHHHHhcCcCCCCCCCCc
Q 024936 146 VAVDVDEVLGNFVSALNRFIADRYSLN-HSV--S---EYHVYEF-----FKIWNCSRDEADLRVHEFFKTPYFKTGIHPL 214 (260)
Q Consensus 146 IaIDIDGVLADfi~~fnk~~Ne~yG~n-ltv--e---D~~~Yd~-----~kv~gvs~EE~~~~l~ef~e~~~Ff~~LpPI 214 (260)
+.+||||||.+- .|.++ ....|.. ... . +|..|-. .+..|++.+++.+. .+.+++.
T Consensus 4 a~FDlD~TLi~~--~w~~~-~~~~g~~~~~~~~~~~~~~~~~~~~r~~ll~~~g~~~~~i~~~----------~~~i~l~ 70 (203)
T TIGR02137 4 ACLDLEGVLVPE--IWIAF-AEKTGIDALKATTRDIPDYDVLMKQRLRILDEHGLKLGDIQEV----------IATLKPL 70 (203)
T ss_pred EEEeCCcccHHH--HHHHH-HHHcCCcHHHHHhcCCcCHHHHHHHHHHHHHHCCCCHHHHHHH----------HHhCCCC
Confidence 679999999975 34444 3445632 111 0 0111100 11125555543222 1245789
Q ss_pred ccHHHHHHHHhhCCcEEEEeCCC
Q 024936 215 PGAQKALHKLSRYCLGNMLSRTI 237 (260)
Q Consensus 215 PGAqEvL~kLse~yEIyIVTAR~ 237 (260)
|||.+.|+.|++.+.+.|||+-.
T Consensus 71 pga~ell~~lk~~~~~~IVS~~~ 93 (203)
T TIGR02137 71 EGAVEFVDWLRERFQVVILSDTF 93 (203)
T ss_pred ccHHHHHHHHHhCCeEEEEeCCh
Confidence 99999999998878999999883
No 66
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=96.59 E-value=0.0017 Score=54.88 Aligned_cols=48 Identities=13% Similarity=0.050 Sum_probs=38.9
Q ss_pred cCCCHHHHHHHHHHHhcCcCCCCCCCCcccHHHHHHHHhh-CCcEEEEeCCC
Q 024936 187 WNCSRDEADLRVHEFFKTPYFKTGIHPLPGAQKALHKLSR-YCLGNMLSRTI 237 (260)
Q Consensus 187 ~gvs~EE~~~~l~ef~e~~~Ff~~LpPIPGAqEvL~kLse-~yEIyIVTAR~ 237 (260)
.|++.+++.....+|+++.. ...+.||+.+.|++|.+ ++.|+|||+..
T Consensus 65 ~g~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~l~~l~~~g~~v~ivS~s~ 113 (202)
T TIGR01490 65 AGLLEEDVRAIVEEFVNQKI---ESILYPEARDLIRWHKAEGHTIVLVSASL 113 (202)
T ss_pred cCCCHHHHHHHHHHHHHHHH---HHhccHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 48999998888888776532 24678999999999966 68999999874
No 67
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=96.47 E-value=0.0054 Score=57.98 Aligned_cols=106 Identities=15% Similarity=0.081 Sum_probs=57.4
Q ss_pred CCCeEEEEeccchhHhHHHHHHHHHHHHhCCCcccccceeeeeeeecCCCHHH-HHHHHHHHhcCc-----CCCCCCCCc
Q 024936 141 HGKIVVAVDVDEVLGNFVSALNRFIADRYSLNHSVSEYHVYEFFKIWNCSRDE-ADLRVHEFFKTP-----YFKTGIHPL 214 (260)
Q Consensus 141 ~~KmrIaIDIDGVLADfi~~fnk~~Ne~yG~nltveD~~~Yd~~kv~gvs~EE-~~~~l~ef~e~~-----~Ff~~LpPI 214 (260)
..+..|++||||||... ..++.+.+.+|....+..++..-.. ..++-++ ..+.+..+-..+ .+...+++.
T Consensus 108 ~~~~LvvfDmDGTLI~~--e~i~eia~~~g~~~~v~~it~~~m~--Geldf~esl~~rv~~l~g~~~~il~~v~~~l~l~ 183 (322)
T PRK11133 108 RTPGLLVMDMDSTAIQI--ECIDEIAKLAGTGEEVAEVTERAMR--GELDFEASLRQRVATLKGADANILQQVRENLPLM 183 (322)
T ss_pred cCCCEEEEECCCCCcch--HHHHHHHHHhCCchHHHHHHHHHHc--CCcCHHHHHHHHHHHhCCCCHHHHHHHHHhCCCC
Confidence 34568999999999832 2233344456765443332211000 1112122 111121110000 012368999
Q ss_pred ccHHHHHHHHhh-CCcEEEEeCCCCchhHHHHHHHhCCC
Q 024936 215 PGAQKALHKLSR-YCLGNMLSRTIPLNGLRSIIRDYFRR 252 (260)
Q Consensus 215 PGAqEvL~kLse-~yEIyIVTAR~~~e~T~~WL~eHFPf 252 (260)
||+.+.|+.|++ ++.+.|||+-...- .+++.+++..
T Consensus 184 pGa~elL~~Lk~~G~~~aIvSgg~~~~--~~~l~~~Lgl 220 (322)
T PRK11133 184 PGLTELVLKLQALGWKVAIASGGFTYF--ADYLRDKLRL 220 (322)
T ss_pred hhHHHHHHHHHHcCCEEEEEECCcchh--HHHHHHHcCC
Confidence 999999999976 78999999884321 3356656654
No 68
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=96.18 E-value=0.0092 Score=50.93 Aligned_cols=27 Identities=26% Similarity=0.158 Sum_probs=23.7
Q ss_pred CCCcccHHHHHHHHhh-CCcEEEEeCCC
Q 024936 211 IHPLPGAQKALHKLSR-YCLGNMLSRTI 237 (260)
Q Consensus 211 LpPIPGAqEvL~kLse-~yEIyIVTAR~ 237 (260)
.++.||+.|.|++|++ ++.++|+|+..
T Consensus 83 ~~~~~g~~e~L~~l~~~g~~~~i~Sn~~ 110 (199)
T PRK09456 83 VALRPEVIAIMHKLREQGHRVVVLSNTN 110 (199)
T ss_pred hccCHHHHHHHHHHHhCCCcEEEEcCCc
Confidence 4688999999999976 79999999974
No 69
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=96.17 E-value=0.02 Score=51.99 Aligned_cols=103 Identities=19% Similarity=0.164 Sum_probs=66.0
Q ss_pred EEEEeccchhHhHHH---HHHHHHHHHhCCCcccccceeeeeeeecC-----------------CCHHHHHHHHHHHhcC
Q 024936 145 VVAVDVDEVLGNFVS---ALNRFIADRYSLNHSVSEYHVYEFFKIWN-----------------CSRDEADLRVHEFFKT 204 (260)
Q Consensus 145 rIaIDIDGVLADfi~---~fnk~~Ne~yG~nltveD~~~Yd~~kv~g-----------------vs~EE~~~~l~ef~e~ 204 (260)
-..+||||+|.|+.. ...+-+-.+||+.++.+.. . +.-| ++.+|+....++...
T Consensus 12 ~~lfD~dG~lvdte~~y~~~~~~~~~~ygk~~~~~~~-~----~~mG~~~~eaa~~~~~~~~dp~s~ee~~~e~~~~~~- 85 (222)
T KOG2914|consen 12 ACLFDMDGTLVDTEDLYTEAWQELLDRYGKPYPWDVK-V----KSMGKRTSEAARLFVKKLPDPVSREEFNKEEEEILD- 85 (222)
T ss_pred eEEEecCCcEEecHHHHHHHHHHHHHHcCCCChHHHH-H----HHcCCCHHHHHHHHHhhcCCCCCHHHHHHHHHHHHH-
Confidence 477999999997443 3344444567886654221 1 1223 344444332222222
Q ss_pred cCCCCCCCCcccHHHHHHHHhh-CCcEEEEeCC--CCchhHHHHHHHhCCCCc
Q 024936 205 PYFKTGIHPLPGAQKALHKLSR-YCLGNMLSRT--IPLNGLRSIIRDYFRRST 254 (260)
Q Consensus 205 ~~Ff~~LpPIPGAqEvL~kLse-~yEIyIVTAR--~~~e~T~~WL~eHFPfi~ 254 (260)
.+.....++|||++-++.|.. +-.+=++|.+ ...+.+-.|+.+.|-.++
T Consensus 86 -~~~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~ 137 (222)
T KOG2914|consen 86 -RLFMNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFS 137 (222)
T ss_pred -HhccccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcC
Confidence 223467899999999999966 6788999998 467889999997776443
No 70
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=95.52 E-value=0.01 Score=50.54 Aligned_cols=38 Identities=11% Similarity=0.017 Sum_probs=29.7
Q ss_pred CCCCcccHHHHHHHHhhCCcEEEEeCCC--CchhHHHHHH
Q 024936 210 GIHPLPGAQKALHKLSRYCLGNMLSRTI--PLNGLRSIIR 247 (260)
Q Consensus 210 ~LpPIPGAqEvL~kLse~yEIyIVTAR~--~~e~T~~WL~ 247 (260)
...+.||+.|.|++|++.|+|+|+|+.. ....-.++|.
T Consensus 56 ~v~~rPgv~efL~~l~~~yel~I~T~~~~~yA~~vl~~ld 95 (156)
T TIGR02250 56 LTKLRPFLHEFLKEASKLYEMHVYTMGTRAYAQAIAKLID 95 (156)
T ss_pred EEEECCCHHHHHHHHHhhcEEEEEeCCcHHHHHHHHHHhC
Confidence 3577899999999999999999999993 3344455554
No 71
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=95.43 E-value=0.017 Score=52.16 Aligned_cols=40 Identities=10% Similarity=-0.052 Sum_probs=34.0
Q ss_pred CCCCcccHHHHHHHHhh-CCcEEEEeCC--CCchhHHHHHHHh
Q 024936 210 GIHPLPGAQKALHKLSR-YCLGNMLSRT--IPLNGLRSIIRDY 249 (260)
Q Consensus 210 ~LpPIPGAqEvL~kLse-~yEIyIVTAR--~~~e~T~~WL~eH 249 (260)
+.++.||+.+.|++|.+ ++.++|+|+| ...+.+.+||..+
T Consensus 185 ~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~ 227 (300)
T PHA02530 185 EDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQT 227 (300)
T ss_pred cCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHc
Confidence 44788999999999966 6899999999 3467899998776
No 72
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=95.36 E-value=0.0037 Score=51.78 Aligned_cols=28 Identities=14% Similarity=0.189 Sum_probs=25.1
Q ss_pred CCCCcccHHHHHHHHhhCCcEEEEeCCC
Q 024936 210 GIHPLPGAQKALHKLSRYCLGNMLSRTI 237 (260)
Q Consensus 210 ~LpPIPGAqEvL~kLse~yEIyIVTAR~ 237 (260)
.+.+.||+.|.|+.|++.++|.|+|+..
T Consensus 43 ~v~l~pG~~e~L~~L~~~~~l~I~Ts~~ 70 (148)
T smart00577 43 YVKKRPGVDEFLKRASELFELVVFTAGL 70 (148)
T ss_pred EEEECCCHHHHHHHHHhccEEEEEeCCc
Confidence 3578899999999999999999999984
No 73
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=95.28 E-value=0.0072 Score=49.87 Aligned_cols=23 Identities=17% Similarity=0.167 Sum_probs=18.6
Q ss_pred EEEeccchhHhHHHHHHHHHHHH
Q 024936 146 VAVDVDEVLGNFVSALNRFIADR 168 (260)
Q Consensus 146 IaIDIDGVLADfi~~fnk~~Ne~ 168 (260)
|.+|+||||.|+...+.+.+++.
T Consensus 2 viFD~DGTL~D~~~~~~~~~~~~ 24 (175)
T TIGR01493 2 MVFDVYGTLVDVHGGVRACLAAI 24 (175)
T ss_pred eEEecCCcCcccHHHHHHHHHHh
Confidence 68999999999888777766543
No 74
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=94.87 E-value=0.0061 Score=50.41 Aligned_cols=31 Identities=19% Similarity=0.202 Sum_probs=22.9
Q ss_pred ccHHHHHHHHhh-CCcEEEEeCCCCchhHHHHH
Q 024936 215 PGAQKALHKLSR-YCLGNMLSRTIPLNGLRSII 246 (260)
Q Consensus 215 PGAqEvL~kLse-~yEIyIVTAR~~~e~T~~WL 246 (260)
|+|.|.|++|.+ +++|+|||+- .......++
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~-~~~~i~~~~ 123 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGS-PDEIIEPIA 123 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEE-EHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCC-cHHHHHHHH
Confidence 888899999954 8999999987 333334444
No 75
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=94.57 E-value=0.096 Score=48.56 Aligned_cols=40 Identities=13% Similarity=0.185 Sum_probs=30.9
Q ss_pred CCCCCcccHHHHHHHHhh--CCcEEEEeCCCCchhHHHHHHHh
Q 024936 209 TGIHPLPGAQKALHKLSR--YCLGNMLSRTIPLNGLRSIIRDY 249 (260)
Q Consensus 209 ~~LpPIPGAqEvL~kLse--~yEIyIVTAR~~~e~T~~WL~eH 249 (260)
+.+|..||-+++++.+.+ .||+.|||-++..= .+.||+.|
T Consensus 81 r~iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfF-Ie~~Lea~ 122 (256)
T KOG3120|consen 81 RSIPIVPGMVRLIKSAAKLGCFELIIVSDANSFF-IEEILEAA 122 (256)
T ss_pred hcCCCCccHHHHHHHHHhCCCceEEEEecCchhH-HHHHHHHc
Confidence 368999999999999977 36999999886542 34566654
No 76
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=94.49 E-value=0.053 Score=45.98 Aligned_cols=27 Identities=11% Similarity=0.298 Sum_probs=24.2
Q ss_pred CCCcccHHHHHHHHhhCCcEEEEeCCC
Q 024936 211 IHPLPGAQKALHKLSRYCLGNMLSRTI 237 (260)
Q Consensus 211 LpPIPGAqEvL~kLse~yEIyIVTAR~ 237 (260)
....||+.|.|++|++.|+|+|.||..
T Consensus 41 v~~RPgl~eFL~~l~~~yei~I~Ts~~ 67 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKWYELVIFTASL 67 (162)
T ss_pred EEECCCHHHHHHHHHhcCEEEEEcCCc
Confidence 356799999999999999999999984
No 77
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=94.40 E-value=0.044 Score=47.52 Aligned_cols=37 Identities=22% Similarity=0.128 Sum_probs=33.1
Q ss_pred CcccHHHHHHHHhh-CCcEEEEeCC--CCchhHHHHHHHh
Q 024936 213 PLPGAQKALHKLSR-YCLGNMLSRT--IPLNGLRSIIRDY 249 (260)
Q Consensus 213 PIPGAqEvL~kLse-~yEIyIVTAR--~~~e~T~~WL~eH 249 (260)
..|||.+.++++.+ +|.|.++||| .....|..||+.|
T Consensus 28 ~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~ 67 (157)
T PF08235_consen 28 THPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQH 67 (157)
T ss_pred hhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHH
Confidence 45899999999977 8999999999 4678899999988
No 78
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=94.03 E-value=0.052 Score=46.20 Aligned_cols=47 Identities=21% Similarity=0.258 Sum_probs=32.7
Q ss_pred CCCCcccHHHHHHHHhhCCcEEEEeCC-CC-chhHHHH--HHHhCCCCccc
Q 024936 210 GIHPLPGAQKALHKLSRYCLGNMLSRT-IP-LNGLRSI--IRDYFRRSTLA 256 (260)
Q Consensus 210 ~LpPIPGAqEvL~kLse~yEIyIVTAR-~~-~e~T~~W--L~eHFPfi~~~ 256 (260)
.+++.|++.++|++|.+.|+|+|+|.- .. ...+.+. |..+|-.+..+
T Consensus 97 ~~~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s 147 (229)
T COG1011 97 LLPDYPEALEALKELGKKYKLGILTNGARPHQERKLRQLGLLDYFDAVFIS 147 (229)
T ss_pred hCccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHHcCChhhhheEEEe
Confidence 379999999999999888999999995 21 1222222 55666655443
No 79
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=93.44 E-value=0.11 Score=43.89 Aligned_cols=27 Identities=19% Similarity=0.272 Sum_probs=23.5
Q ss_pred CCCcccHHHHHHHHhh-CCcEEEEeCCC
Q 024936 211 IHPLPGAQKALHKLSR-YCLGNMLSRTI 237 (260)
Q Consensus 211 LpPIPGAqEvL~kLse-~yEIyIVTAR~ 237 (260)
+.|.||+.|.|++|++ ++.+.|+|+..
T Consensus 28 ~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~ 55 (181)
T PRK08942 28 WIPIPGSIEAIARLKQAGYRVVVATNQS 55 (181)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 4678999999999977 69999999873
No 80
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=93.14 E-value=0.19 Score=45.95 Aligned_cols=40 Identities=18% Similarity=0.160 Sum_probs=30.6
Q ss_pred CCCCCcccHHHHHHHHhh---CCcEEEEeCCCCchhHHHHHHHh
Q 024936 209 TGIHPLPGAQKALHKLSR---YCLGNMLSRTIPLNGLRSIIRDY 249 (260)
Q Consensus 209 ~~LpPIPGAqEvL~kLse---~yEIyIVTAR~~~e~T~~WL~eH 249 (260)
+.+|+.||-++.|+.|.+ +++++|||-.+..= ...||++|
T Consensus 68 ~~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~f-I~~iL~~~ 110 (234)
T PF06888_consen 68 RSIPIDPGMKELLRFLAKNQRGFDLIIISDANSFF-IETILEHH 110 (234)
T ss_pred HcCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhH-HHHHHHhC
Confidence 578999999999999943 79999999885432 23466544
No 81
>PRK08238 hypothetical protein; Validated
Probab=92.00 E-value=0.27 Score=49.09 Aligned_cols=84 Identities=8% Similarity=-0.021 Sum_probs=47.5
Q ss_pred eEEEEeccchhH--hHHHHHHHHHHHHhCCCcccccceeeeeeeecCCCHHHHHHHHHHHhcCcCCC-CCCCCcccHHHH
Q 024936 144 IVVAVDVDEVLG--NFVSALNRFIADRYSLNHSVSEYHVYEFFKIWNCSRDEADLRVHEFFKTPYFK-TGIHPLPGAQKA 220 (260)
Q Consensus 144 mrIaIDIDGVLA--Dfi~~fnk~~Ne~yG~nltveD~~~Yd~~kv~gvs~EE~~~~l~ef~e~~~Ff-~~LpPIPGAqEv 220 (260)
.-++||+||||. |.+..+..+.-++ .+...-.. -+ +-..| +..+.+.+-+ .-.+. ..+|..||+.|.
T Consensus 11 ~pl~~DlDgTLi~td~l~e~~~~~l~~--~p~~~~~l-~~--~~~~g--~a~lK~~~a~---~~~~d~~~lp~~pga~e~ 80 (479)
T PRK08238 11 LPLVVDLDGTLIRTDLLHESIFALLRR--NPLALLRL-PL--WLLRG--KAALKRRLAR---RVDLDVATLPYNEEVLDY 80 (479)
T ss_pred CCEEEeCCCCccccchHHHHHHHHHHh--ChHHHHHH-HH--HHHhc--HHHHHHHHHh---hcCCChhhCCCChhHHHH
Confidence 468999999996 6555555543332 22221110 00 00012 1222222222 11222 456788999999
Q ss_pred HHHHhh-CCcEEEEeCCC
Q 024936 221 LHKLSR-YCLGNMLSRTI 237 (260)
Q Consensus 221 L~kLse-~yEIyIVTAR~ 237 (260)
|+++++ ++.++|+||..
T Consensus 81 L~~lk~~G~~v~LaTas~ 98 (479)
T PRK08238 81 LRAERAAGRKLVLATASD 98 (479)
T ss_pred HHHHHHCCCEEEEEeCCC
Confidence 999966 78999999984
No 82
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=91.64 E-value=0.45 Score=49.27 Aligned_cols=27 Identities=15% Similarity=0.048 Sum_probs=22.4
Q ss_pred CCcccHHHHHHHHhh--CCcEEEEeCCCC
Q 024936 212 HPLPGAQKALHKLSR--YCLGNMLSRTIP 238 (260)
Q Consensus 212 pPIPGAqEvL~kLse--~yEIyIVTAR~~ 238 (260)
.|-+...++|++|.+ +..|+|||.|..
T Consensus 514 ~~~~~~~~~L~~L~~d~g~~V~ivSGR~~ 542 (726)
T PRK14501 514 VPDKELRDLLRRLAADPNTDVAIISGRDR 542 (726)
T ss_pred CCCHHHHHHHHHHHcCCCCeEEEEeCCCH
Confidence 344788999999987 789999999963
No 83
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=90.72 E-value=0.36 Score=40.58 Aligned_cols=23 Identities=17% Similarity=0.082 Sum_probs=16.5
Q ss_pred ccHHHHHHHHhh-CCcEEEEeCCC
Q 024936 215 PGAQKALHKLSR-YCLGNMLSRTI 237 (260)
Q Consensus 215 PGAqEvL~kLse-~yEIyIVTAR~ 237 (260)
|-.+++|++|.+ ++.++|+|.|.
T Consensus 18 ~~~~~al~~l~~~g~~~~i~TGR~ 41 (254)
T PF08282_consen 18 PETIEALKELQEKGIKLVIATGRS 41 (254)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSST
T ss_pred HHHHHHHHhhcccceEEEEEccCc
Confidence 445677777764 78888888884
No 84
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=90.38 E-value=0.72 Score=43.32 Aligned_cols=28 Identities=18% Similarity=0.121 Sum_probs=24.9
Q ss_pred CCCCcccHHHHHHHHhh-CCcEEEEeCCC
Q 024936 210 GIHPLPGAQKALHKLSR-YCLGNMLSRTI 237 (260)
Q Consensus 210 ~LpPIPGAqEvL~kLse-~yEIyIVTAR~ 237 (260)
.+++.||+.+.|+.|.+ +..+.|+||-.
T Consensus 119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G~ 147 (277)
T TIGR01544 119 DVMLKDGYENFFDKLQQHSIPVFIFSAGI 147 (277)
T ss_pred CCccCcCHHHHHHHHHHCCCcEEEEeCCc
Confidence 57899999999999966 68999999883
No 85
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=89.83 E-value=0.42 Score=43.02 Aligned_cols=15 Identities=33% Similarity=0.392 Sum_probs=12.0
Q ss_pred CCeEEEEeccchhHh
Q 024936 142 GKIVVAVDVDEVLGN 156 (260)
Q Consensus 142 ~KmrIaIDIDGVLAD 156 (260)
+.+.|++||||||.+
T Consensus 3 ~~kli~~DlDGTLl~ 17 (273)
T PRK00192 3 MKLLVFTDLDGTLLD 17 (273)
T ss_pred cceEEEEcCcccCcC
Confidence 345799999999984
No 86
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=89.81 E-value=0.28 Score=43.73 Aligned_cols=25 Identities=16% Similarity=-0.142 Sum_probs=21.4
Q ss_pred CcccHHHHHHHHhhCCcEEEEeCCC
Q 024936 213 PLPGAQKALHKLSRYCLGNMLSRTI 237 (260)
Q Consensus 213 PIPGAqEvL~kLse~yEIyIVTAR~ 237 (260)
..|+..|-|+.+.+.|||+|=||+.
T Consensus 46 kRP~l~eFL~~~~~~feIvVwTAa~ 70 (195)
T TIGR02245 46 MRPYLHEFLTSAYEDYDIVIWSATS 70 (195)
T ss_pred eCCCHHHHHHHHHhCCEEEEEecCC
Confidence 3488899999999999999999983
No 87
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=88.43 E-value=0.61 Score=42.48 Aligned_cols=18 Identities=22% Similarity=0.307 Sum_probs=14.4
Q ss_pred CCCCeEEEEeccchhHhH
Q 024936 140 LHGKIVVAVDVDEVLGNF 157 (260)
Q Consensus 140 ~~~KmrIaIDIDGVLADf 157 (260)
+..+..|++|+||||++.
T Consensus 11 ~~~~~li~~D~DGTLl~~ 28 (266)
T PRK10187 11 LSANYAWFFDLDGTLAEI 28 (266)
T ss_pred CCCCEEEEEecCCCCCCC
Confidence 455678999999999943
No 88
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=87.42 E-value=0.62 Score=41.48 Aligned_cols=27 Identities=15% Similarity=-0.129 Sum_probs=20.8
Q ss_pred CCcccHHHHHHHHhhC--CcEEEEeCCCC
Q 024936 212 HPLPGAQKALHKLSRY--CLGNMLSRTIP 238 (260)
Q Consensus 212 pPIPGAqEvL~kLse~--yEIyIVTAR~~ 238 (260)
.|-++..+.|++|.+. .-|+|||.|..
T Consensus 25 ~~~~~~~~~L~~L~~~~~~~v~ivSGR~~ 53 (244)
T TIGR00685 25 VVSDRLLTILQKLAARPHNAIWIISGRKF 53 (244)
T ss_pred CCCHHHHHHHHHHHhCCCCeEEEEECCCh
Confidence 4458899999999774 45789999943
No 89
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=86.02 E-value=1.1 Score=35.15 Aligned_cols=27 Identities=33% Similarity=0.431 Sum_probs=21.9
Q ss_pred CCCCcccHHHHHHHHhh-CCcEEEEeCC
Q 024936 210 GIHPLPGAQKALHKLSR-YCLGNMLSRT 236 (260)
Q Consensus 210 ~LpPIPGAqEvL~kLse-~yEIyIVTAR 236 (260)
+-.|+|||.|+|++|.+ +..++++|+.
T Consensus 12 g~~~ipga~e~l~~L~~~g~~~~~lTNn 39 (101)
T PF13344_consen 12 GNEPIPGAVEALDALRERGKPVVFLTNN 39 (101)
T ss_dssp TTEE-TTHHHHHHHHHHTTSEEEEEES-
T ss_pred CCCcCcCHHHHHHHHHHcCCCEEEEeCC
Confidence 34688999999999977 5899999998
No 90
>PLN02580 trehalose-phosphatase
Probab=85.99 E-value=0.79 Score=44.93 Aligned_cols=26 Identities=12% Similarity=0.172 Sum_probs=22.1
Q ss_pred CCcccHHHHHHHHhhCCcEEEEeCCC
Q 024936 212 HPLPGAQKALHKLSRYCLGNMLSRTI 237 (260)
Q Consensus 212 pPIPGAqEvL~kLse~yEIyIVTAR~ 237 (260)
.|-|+..++|++|.+.+.|+|||.|.
T Consensus 141 ~~s~~~~~aL~~La~~~~VAIVSGR~ 166 (384)
T PLN02580 141 LMSDAMRSAVKNVAKYFPTAIISGRS 166 (384)
T ss_pred cCCHHHHHHHHHHhhCCCEEEEeCCC
Confidence 44578999999998888999999994
No 91
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=85.88 E-value=1.5 Score=44.28 Aligned_cols=103 Identities=10% Similarity=0.098 Sum_probs=56.1
Q ss_pred CeEEEEeccchhHh---HHHHHHHHHHHHh----------------------CCCcccccceeeeeeeecCCCHHHHHHH
Q 024936 143 KIVVAVDVDEVLGN---FVSALNRFIADRY----------------------SLNHSVSEYHVYEFFKIWNCSRDEADLR 197 (260)
Q Consensus 143 KmrIaIDIDGVLAD---fi~~fnk~~Ne~y----------------------G~nltveD~~~Yd~~kv~gvs~EE~~~~ 197 (260)
...+++|+||||+. +.+.|+.+..+.- ......+.+. +.-..|.+.+++...
T Consensus 22 ~~~~~FDfDGTLt~~~s~f~~Fll~A~~~~~~~r~lllll~~P~~~l~~~~~~~~~~~~~l~---~~~f~G~~~~el~~~ 98 (497)
T PLN02177 22 NQTVAADLDGTLLISRSAFPYYLLVALEAGSLLRALILLLSVPFVYFTYLFISESLAIKTFV---FIAFAGLKIRDIELV 98 (497)
T ss_pred ccEEEEecCCcccCCCCccHHHHHHHcccchHHHHHHHHHHhHHHHHHHhcCCchhHHHHHH---HHHHcCCCHHHHHHH
Confidence 34699999999993 6666655443211 1111111111 112348888887655
Q ss_pred HHHHhcCcCCCCCCCCcccHHHHHHHHhhCCcEEEEeCCCCchhHHHHHHHhCCCCcc
Q 024936 198 VHEFFKTPYFKTGIHPLPGAQKALHKLSRYCLGNMLSRTIPLNGLRSIIRDYFRRSTL 255 (260)
Q Consensus 198 l~ef~e~~~Ff~~LpPIPGAqEvL~kLse~yEIyIVTAR~~~e~T~~WL~eHFPfi~~ 255 (260)
..+|+.+ |+.+ ..-|.|.+++++ ++ +.+||||... --.+-|.++|++.-.+
T Consensus 99 ~r~~l~~--f~~~-~l~~~a~~~~~~--~g-~~vvVSASp~-~~Vepfa~~~LGid~V 149 (497)
T PLN02177 99 SRSVLPK--FYAE-DVHPETWRVFNS--FG-KRYIITASPR-IMVEPFVKTFLGADKV 149 (497)
T ss_pred HHHHHHH--HHHH-hcCHHHHHHHHh--CC-CEEEEECCcH-HHHHHHHHHcCCCCEE
Confidence 5444433 2211 134567766643 33 4588987632 2344788888876644
No 92
>PLN03017 trehalose-phosphatase
Probab=84.57 E-value=0.79 Score=44.73 Aligned_cols=18 Identities=28% Similarity=0.322 Sum_probs=14.0
Q ss_pred CCCCeEEEEeccchhHhH
Q 024936 140 LHGKIVVAVDVDEVLGNF 157 (260)
Q Consensus 140 ~~~KmrIaIDIDGVLADf 157 (260)
..++..|+.|+||||+.+
T Consensus 108 ~~k~~llflD~DGTL~Pi 125 (366)
T PLN03017 108 RGKQIVMFLDYDGTLSPI 125 (366)
T ss_pred cCCCeEEEEecCCcCcCC
Confidence 446678999999999843
No 93
>PLN02151 trehalose-phosphatase
Probab=83.73 E-value=1.5 Score=42.56 Aligned_cols=26 Identities=12% Similarity=0.111 Sum_probs=20.8
Q ss_pred CCcccHHHHHHHHhhCCcEEEEeCCC
Q 024936 212 HPLPGAQKALHKLSRYCLGNMLSRTI 237 (260)
Q Consensus 212 pPIPGAqEvL~kLse~yEIyIVTAR~ 237 (260)
.|-|+..++|++|.+.+.|+|||.|.
T Consensus 120 ~~~~~~~~aL~~La~~~~vaIvSGR~ 145 (354)
T PLN02151 120 FMSKKMRNTVRKLAKCFPTAIVSGRC 145 (354)
T ss_pred cCCHHHHHHHHHHhcCCCEEEEECCC
Confidence 34477888888888878899999883
No 94
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=80.57 E-value=2 Score=36.15 Aligned_cols=27 Identities=15% Similarity=0.154 Sum_probs=23.5
Q ss_pred CCCcccHHHHHHHHhh-CCcEEEEeCCC
Q 024936 211 IHPLPGAQKALHKLSR-YCLGNMLSRTI 237 (260)
Q Consensus 211 LpPIPGAqEvL~kLse-~yEIyIVTAR~ 237 (260)
+.+.||+.|+|++|++ ++.|+|+|+-.
T Consensus 25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~ 52 (176)
T TIGR00213 25 FEFIDGVIDALRELKKMGYALVLVTNQS 52 (176)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 4677999999999976 79999999873
No 95
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=79.22 E-value=3.3 Score=42.09 Aligned_cols=106 Identities=8% Similarity=0.056 Sum_probs=58.4
Q ss_pred CCCCeEEEEeccchhH---hHHHHHHHHHHHHh---------------------C-CCcccccceeeeeeeecCCCHHHH
Q 024936 140 LHGKIVVAVDVDEVLG---NFVSALNRFIADRY---------------------S-LNHSVSEYHVYEFFKIWNCSRDEA 194 (260)
Q Consensus 140 ~~~KmrIaIDIDGVLA---Dfi~~fnk~~Ne~y---------------------G-~nltveD~~~Yd~~kv~gvs~EE~ 194 (260)
...+..+++|+||||+ |..++|....-+.- + .+..+..+.. .-..|+..+++
T Consensus 5 ~~~~~~~~fD~DGTLlrs~ssFpyFmlva~eagG~~R~~~LL~l~P~l~ll~~~~~~~~~lK~mi~---v~f~Gl~~~di 81 (498)
T PLN02499 5 GTTSYSVVSELEGTLLKDADPFSYFMLVAFEASGLIRFALLLFLWPIIRLLDMLGMGDAALKLMIF---VATAGVHESEI 81 (498)
T ss_pred CcccceEEEecccceecCCCccHHHHHHHHHhccHHHHHHHHHHhHHHHHHHhcCCchHHHHHHHH---HHhCCCCHHHH
Confidence 3455689999999999 46666655211111 1 1111111100 12347777777
Q ss_pred HHHHHHHhcCcCCCCCCCCcccHHHHHHHHhhCCcEEEEeCCCCchhHHHHHHHhCCCCcc
Q 024936 195 DLRVHEFFKTPYFKTGIHPLPGAQKALHKLSRYCLGNMLSRTIPLNGLRSIIRDYFRRSTL 255 (260)
Q Consensus 195 ~~~l~ef~e~~~Ff~~LpPIPGAqEvL~kLse~yEIyIVTAR~~~e~T~~WL~eHFPfi~~ 255 (260)
...-+.+..+ .|.+++.| . +++.++..-++++|||- ..---+-|+++|++.--+
T Consensus 82 e~vaRavlpk-f~~~dv~~--e---~~~~~~~~g~~vVVTAs-PrvmVEpFake~LG~D~V 135 (498)
T PLN02499 82 ESVARAVLPK-FYMDDVDM--E---AWKVFSSCDKRVVVTRM-PRVMVERFAKEHLRADEV 135 (498)
T ss_pred HHHHHHHhhH-HHHhhCCH--H---HHHHHHcCCeEEEEeCC-HHHHHHHHHHHhcCCceE
Confidence 6655554433 23334444 2 44445444488888865 223356799999976544
No 96
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=79.05 E-value=3.9 Score=36.18 Aligned_cols=27 Identities=30% Similarity=0.354 Sum_probs=23.6
Q ss_pred CCCCcccHHHHHHHHhh-CCcEEEEeCC
Q 024936 210 GIHPLPGAQKALHKLSR-YCLGNMLSRT 236 (260)
Q Consensus 210 ~LpPIPGAqEvL~kLse-~yEIyIVTAR 236 (260)
...|+|||.|+|++|++ ++.++|+|+.
T Consensus 22 ~~~~~pga~e~L~~L~~~G~~~~ivTN~ 49 (242)
T TIGR01459 22 GNHTYPGAVQNLNKIIAQGKPVYFVSNS 49 (242)
T ss_pred CCccCccHHHHHHHHHHCCCEEEEEeCC
Confidence 34678999999999976 7899999997
No 97
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=78.38 E-value=2.6 Score=33.31 Aligned_cols=26 Identities=15% Similarity=0.082 Sum_probs=21.6
Q ss_pred CCcccHHHHHHHHhh-CCcEEEEeCCC
Q 024936 212 HPLPGAQKALHKLSR-YCLGNMLSRTI 237 (260)
Q Consensus 212 pPIPGAqEvL~kLse-~yEIyIVTAR~ 237 (260)
.+.||+.++|++|.+ ++.++|+|+..
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~ 51 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQS 51 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCc
Confidence 466899999999965 68999999884
No 98
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=78.32 E-value=3.4 Score=37.07 Aligned_cols=39 Identities=13% Similarity=-0.053 Sum_probs=30.9
Q ss_pred HHHHHhcCcCCCCCCCCcccHHHHHHHHhh-CCcEEEEeCCC
Q 024936 197 RVHEFFKTPYFKTGIHPLPGAQKALHKLSR-YCLGNMLSRTI 237 (260)
Q Consensus 197 ~l~ef~e~~~Ff~~LpPIPGAqEvL~kLse-~yEIyIVTAR~ 237 (260)
++.++|+.. .. ..++.||+.++|++|.+ ++.|+|+|+..
T Consensus 82 iw~~~Y~~~-~~-~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s 121 (220)
T TIGR01691 82 IWRQGYESG-EL-TSHLYPDVPPALEAWLQLGLRLAVYSSGS 121 (220)
T ss_pred HHHHHHhcC-Cc-ccCcCcCHHHHHHHHHHCCCEEEEEeCCC
Confidence 366666663 23 56899999999999966 79999999984
No 99
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=75.44 E-value=5.8 Score=35.23 Aligned_cols=93 Identities=10% Similarity=0.004 Sum_probs=44.4
Q ss_pred EEEeccchhHh---HHHHHHHHHHHHhCCCcccccceeeeeeeecCCCHHHHHHHHHHHhcCcCCCCCCCCcccHHHHHH
Q 024936 146 VAVDVDEVLGN---FVSALNRFIADRYSLNHSVSEYHVYEFFKIWNCSRDEADLRVHEFFKTPYFKTGIHPLPGAQKALH 222 (260)
Q Consensus 146 IaIDIDGVLAD---fi~~fnk~~Ne~yG~nltveD~~~Yd~~kv~gvs~EE~~~~l~ef~e~~~Ff~~LpPIPGAqEvL~ 222 (260)
|.+|+||||.+ .++.-.++++..++..+.+.=. ..--+-++++..+.+.+.+.-+.- .-..+.-+.-+.+
T Consensus 1 ~lfD~DGvL~~~~~~~~~a~e~i~~l~~~g~~~~~~-----tN~~~~~~~~~~~~l~~~~g~~~~--~~~iits~~~~~~ 73 (236)
T TIGR01460 1 FLFDIDGVLWLGHKPIPGAAEALNRLRAKGKPVVFL-----TNNSSRSEEDYAEKLSSLLGVDVS--PDQIITSGSVTKD 73 (236)
T ss_pred CEEeCcCccCcCCccCcCHHHHHHHHHHCCCeEEEE-----ECCCCCCHHHHHHHHHHhcCCCCC--HHHeeeHHHHHHH
Confidence 47899999995 4444455655544333322111 112234666666666663221111 1123333444444
Q ss_pred HHhhC---CcEEEEeCCCCchhHHHHHHHh
Q 024936 223 KLSRY---CLGNMLSRTIPLNGLRSIIRDY 249 (260)
Q Consensus 223 kLse~---yEIyIVTAR~~~e~T~~WL~eH 249 (260)
.|+++ -.++++-. +.-.+||+.+
T Consensus 74 ~l~~~~~~~~v~v~G~----~~~~~~l~~~ 99 (236)
T TIGR01460 74 LLRQRFEGEKVYVIGV----GELRESLEGL 99 (236)
T ss_pred HHHHhCCCCEEEEECC----HHHHHHHHHc
Confidence 44432 24677653 3345566543
No 100
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=74.90 E-value=3.2 Score=32.65 Aligned_cols=11 Identities=45% Similarity=0.504 Sum_probs=9.5
Q ss_pred EEEeccchhHh
Q 024936 146 VAVDVDEVLGN 156 (260)
Q Consensus 146 IaIDIDGVLAD 156 (260)
|.+||||||-+
T Consensus 1 ~l~D~dGvl~~ 11 (101)
T PF13344_consen 1 FLFDLDGVLYN 11 (101)
T ss_dssp EEEESTTTSEE
T ss_pred CEEeCccEeEe
Confidence 67999999983
No 101
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=73.92 E-value=5.4 Score=36.06 Aligned_cols=25 Identities=24% Similarity=0.424 Sum_probs=22.5
Q ss_pred CcccHHHHHHHHhh-CCcEEEEeCCC
Q 024936 213 PLPGAQKALHKLSR-YCLGNMLSRTI 237 (260)
Q Consensus 213 PIPGAqEvL~kLse-~yEIyIVTAR~ 237 (260)
++|||.|+|++|++ +..++|+|+|.
T Consensus 22 ~~~~a~~al~~l~~~G~~~~~~Tn~~ 47 (257)
T TIGR01458 22 AVPGSQEAVKRLRGASVKVRFVTNTT 47 (257)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCC
Confidence 67999999999976 79999999984
No 102
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=73.25 E-value=3 Score=35.47 Aligned_cols=26 Identities=23% Similarity=0.115 Sum_probs=23.2
Q ss_pred CCCcccHHHHHHHHhh-CCcEEEEeCC
Q 024936 211 IHPLPGAQKALHKLSR-YCLGNMLSRT 236 (260)
Q Consensus 211 LpPIPGAqEvL~kLse-~yEIyIVTAR 236 (260)
++|.||+.++|++|.+ +|.|+|||+-
T Consensus 28 ~~~~pgv~e~L~~L~~~g~~l~IvSN~ 54 (161)
T TIGR01261 28 LRFEKGVIPALLKLKKAGYKFVMVTNQ 54 (161)
T ss_pred eeECCCHHHHHHHHHHCCCeEEEEeCC
Confidence 5788999999999977 6999999984
No 103
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=73.04 E-value=7.8 Score=34.44 Aligned_cols=42 Identities=21% Similarity=0.300 Sum_probs=34.0
Q ss_pred CCCCcccHHHHHHHHhh-CCcEEEEeCC--CCchhHHHHHHHhCC
Q 024936 210 GIHPLPGAQKALHKLSR-YCLGNMLSRT--IPLNGLRSIIRDYFR 251 (260)
Q Consensus 210 ~LpPIPGAqEvL~kLse-~yEIyIVTAR--~~~e~T~~WL~eHFP 251 (260)
+-.++|+|.|+|+.|.+ +..++++|.. ....+..+.|.+|+.
T Consensus 12 ~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g 56 (236)
T TIGR01460 12 GHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLG 56 (236)
T ss_pred CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcC
Confidence 34678999999999976 6899999977 456777788888764
No 104
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=69.83 E-value=4 Score=33.44 Aligned_cols=26 Identities=23% Similarity=0.144 Sum_probs=22.5
Q ss_pred CCcccHHHHHHHHhh-CCcEEEEeCCC
Q 024936 212 HPLPGAQKALHKLSR-YCLGNMLSRTI 237 (260)
Q Consensus 212 pPIPGAqEvL~kLse-~yEIyIVTAR~ 237 (260)
.|.||+.++|+.|++ +|.++|+|+..
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~ 53 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQS 53 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCC
Confidence 467999999999966 79999999963
No 105
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=69.77 E-value=3.3 Score=34.01 Aligned_cols=37 Identities=14% Similarity=0.096 Sum_probs=28.3
Q ss_pred CCcccHHHHHHHHhhCCcEEEEeCCC--CchhHHHHHHH
Q 024936 212 HPLPGAQKALHKLSRYCLGNMLSRTI--PLNGLRSIIRD 248 (260)
Q Consensus 212 pPIPGAqEvL~kLse~yEIyIVTAR~--~~e~T~~WL~e 248 (260)
.+.||+.+-|+.|++.|+|+|.|+.. ......++|..
T Consensus 36 ~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~~~ldp 74 (159)
T PF03031_consen 36 KLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVLDALDP 74 (159)
T ss_dssp EE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHHHHHTT
T ss_pred eeCchHHHHHHHHHHhceEEEEEeehhhhhhHHHHhhhh
Confidence 45699999999999999999999994 45666677764
No 106
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=68.85 E-value=5.1 Score=35.48 Aligned_cols=27 Identities=22% Similarity=0.439 Sum_probs=19.8
Q ss_pred CeEEEEeccchhHh-------HHHHHHHHHHHHh
Q 024936 143 KIVVAVDVDEVLGN-------FVSALNRFIADRY 169 (260)
Q Consensus 143 KmrIaIDIDGVLAD-------fi~~fnk~~Ne~y 169 (260)
+..|+.||||||.+ ..+.+.+++++..
T Consensus 1 ~~li~tDlDGTLl~~~~~~~~~~~~~~~~i~~~~ 34 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHTDGDNQALLRLNALLEDHR 34 (249)
T ss_pred CeEEEEcCCCcCcCCCCCChHHHHHHHHHHHHhh
Confidence 45799999999995 5566666665533
No 107
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=68.14 E-value=2.6 Score=37.35 Aligned_cols=15 Identities=27% Similarity=0.237 Sum_probs=12.6
Q ss_pred CCeEEEEeccchhHh
Q 024936 142 GKIVVAVDVDEVLGN 156 (260)
Q Consensus 142 ~KmrIaIDIDGVLAD 156 (260)
+.+.|++||||||.+
T Consensus 2 ~~kli~~DlDGTLl~ 16 (264)
T COG0561 2 MIKLLAFDLDGTLLD 16 (264)
T ss_pred CeeEEEEcCCCCccC
Confidence 456899999999993
No 108
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=67.69 E-value=9 Score=32.58 Aligned_cols=24 Identities=13% Similarity=0.090 Sum_probs=20.9
Q ss_pred CcccHHHHHHHHhh-CCcEEEEeCC
Q 024936 213 PLPGAQKALHKLSR-YCLGNMLSRT 236 (260)
Q Consensus 213 PIPGAqEvL~kLse-~yEIyIVTAR 236 (260)
+.||+.|+|++|.+ ++.|.|||+.
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~ 67 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQ 67 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCC
Confidence 56899999999965 7999999986
No 109
>PLN02645 phosphoglycolate phosphatase
Probab=67.63 E-value=8.4 Score=35.80 Aligned_cols=26 Identities=12% Similarity=0.052 Sum_probs=22.5
Q ss_pred CCcccHHHHHHHHhh-CCcEEEEeCCC
Q 024936 212 HPLPGAQKALHKLSR-YCLGNMLSRTI 237 (260)
Q Consensus 212 pPIPGAqEvL~kLse-~yEIyIVTAR~ 237 (260)
.|+|||.|+|++|++ +..++++|++.
T Consensus 44 ~~~~ga~e~l~~lr~~g~~~~~~TN~~ 70 (311)
T PLN02645 44 KLIEGVPETLDMLRSMGKKLVFVTNNS 70 (311)
T ss_pred ccCcCHHHHHHHHHHCCCEEEEEeCCC
Confidence 467999999999966 78999999984
No 110
>PLN02423 phosphomannomutase
Probab=67.59 E-value=3.2 Score=37.29 Aligned_cols=16 Identities=25% Similarity=0.370 Sum_probs=12.6
Q ss_pred CCCeEEEEeccchhHh
Q 024936 141 HGKIVVAVDVDEVLGN 156 (260)
Q Consensus 141 ~~KmrIaIDIDGVLAD 156 (260)
+.|..+++||||||.+
T Consensus 5 ~~~~i~~~D~DGTLl~ 20 (245)
T PLN02423 5 KPGVIALFDVDGTLTA 20 (245)
T ss_pred ccceEEEEeccCCCcC
Confidence 4556677999999993
No 111
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=67.49 E-value=7.5 Score=36.25 Aligned_cols=25 Identities=28% Similarity=0.448 Sum_probs=22.4
Q ss_pred CCcccHHHHHHHHh-hCCcEEEEeCC
Q 024936 212 HPLPGAQKALHKLS-RYCLGNMLSRT 236 (260)
Q Consensus 212 pPIPGAqEvL~kLs-e~yEIyIVTAR 236 (260)
.++|||+|+|++|+ ++-.|-+||..
T Consensus 23 ~avpga~eAl~rLr~~~~kVkFvTNt 48 (262)
T KOG3040|consen 23 AAVPGAVEALKRLRDQHVKVKFVTNT 48 (262)
T ss_pred ccCCCHHHHHHHHHhcCceEEEEecC
Confidence 38899999999998 57799999988
No 112
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=67.21 E-value=14 Score=33.81 Aligned_cols=37 Identities=5% Similarity=-0.174 Sum_probs=26.8
Q ss_pred CCcccHHHHHHHHhh-CCcEEEEeCCC--CchhHHHHHHH
Q 024936 212 HPLPGAQKALHKLSR-YCLGNMLSRTI--PLNGLRSIIRD 248 (260)
Q Consensus 212 pPIPGAqEvL~kLse-~yEIyIVTAR~--~~e~T~~WL~e 248 (260)
..=++-.+.|+.|++ +..|+.+|+|. ....|.+=|++
T Consensus 81 lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~ 120 (252)
T PF11019_consen 81 LIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKS 120 (252)
T ss_pred EcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHH
Confidence 333678899999976 68999999994 34445555554
No 113
>PRK06769 hypothetical protein; Validated
Probab=66.98 E-value=5 Score=34.07 Aligned_cols=25 Identities=16% Similarity=0.081 Sum_probs=22.3
Q ss_pred CCcccHHHHHHHHhh-CCcEEEEeCC
Q 024936 212 HPLPGAQKALHKLSR-YCLGNMLSRT 236 (260)
Q Consensus 212 pPIPGAqEvL~kLse-~yEIyIVTAR 236 (260)
.+.||+.|+|++|++ ++.+.|+|+.
T Consensus 28 ~~~pgv~e~L~~Lk~~G~~l~I~Tn~ 53 (173)
T PRK06769 28 TLFPFTKASLQKLKANHIKIFSFTNQ 53 (173)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEECC
Confidence 567999999999976 7999999986
No 114
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=66.84 E-value=7.3 Score=31.47 Aligned_cols=25 Identities=16% Similarity=0.127 Sum_probs=22.7
Q ss_pred CCcccHHHHHHHHhh-CCcEEEEeCC
Q 024936 212 HPLPGAQKALHKLSR-YCLGNMLSRT 236 (260)
Q Consensus 212 pPIPGAqEvL~kLse-~yEIyIVTAR 236 (260)
++.||+.+.|++|++ ++.+.|+|+.
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~ 54 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYN 54 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCC
Confidence 677999999999966 7899999998
No 115
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=66.77 E-value=12 Score=34.35 Aligned_cols=86 Identities=15% Similarity=0.025 Sum_probs=47.4
Q ss_pred CCeEEEEeccchhH--hHHHHHHHH---------HHHHhCCCcccccceeeeeeeecCCCHHHHHHHHHHHhcCcCCCCC
Q 024936 142 GKIVVAVDVDEVLG--NFVSALNRF---------IADRYSLNHSVSEYHVYEFFKIWNCSRDEADLRVHEFFKTPYFKTG 210 (260)
Q Consensus 142 ~KmrIaIDIDGVLA--Dfi~~fnk~---------~Ne~yG~nltveD~~~Yd~~kv~gvs~EE~~~~l~ef~e~~~Ff~~ 210 (260)
.|+.|.-|.||||+ |.+..+-+- +.......++..|.-.+ +..-.+.+.+|+-+.+.+ +
T Consensus 2 kk~vi~sDFDGTITl~Ds~~~itdtf~~~e~k~l~~~vls~tiS~rd~~g~-mf~~i~~s~~Eile~llk---------~ 71 (220)
T COG4359 2 KKPVIFSDFDGTITLNDSNDYITDTFGPGEWKALKDGVLSKTISFRDGFGR-MFGSIHSSLEEILEFLLK---------D 71 (220)
T ss_pred CceEEEecCCCceEecchhHHHHhccCchHHHHHHHHHhhCceeHHHHHHH-HHHhcCCCHHHHHHHHHh---------h
Confidence 56789999999999 444433222 11111223333232111 112234445554333322 4
Q ss_pred CCCcccHHHHHHHHhh-CCcEEEEeCCC
Q 024936 211 IHPLPGAQKALHKLSR-YCLGNMLSRTI 237 (260)
Q Consensus 211 LpPIPGAqEvL~kLse-~yEIyIVTAR~ 237 (260)
+..-||=+|-++..++ .-.++||||-|
T Consensus 72 i~Idp~fKef~e~ike~di~fiVvSsGm 99 (220)
T COG4359 72 IKIDPGFKEFVEWIKEHDIPFIVVSSGM 99 (220)
T ss_pred cccCccHHHHHHHHHHcCCCEEEEeCCC
Confidence 5566788888888766 46888898875
No 116
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=66.06 E-value=3 Score=34.80 Aligned_cols=12 Identities=17% Similarity=0.343 Sum_probs=10.8
Q ss_pred EEEEeccchhHh
Q 024936 145 VVAVDVDEVLGN 156 (260)
Q Consensus 145 rIaIDIDGVLAD 156 (260)
.|++||||||.+
T Consensus 3 ~i~~DiDGTL~~ 14 (126)
T TIGR01689 3 RLVMDLDNTITL 14 (126)
T ss_pred EEEEeCCCCccc
Confidence 799999999984
No 117
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=65.14 E-value=10 Score=40.37 Aligned_cols=36 Identities=19% Similarity=0.103 Sum_probs=26.0
Q ss_pred CCCcccHHHHHHHHhh--CCcEEEEeCCCCchhHHHHHH
Q 024936 211 IHPLPGAQKALHKLSR--YCLGNMLSRTIPLNGLRSIIR 247 (260)
Q Consensus 211 LpPIPGAqEvL~kLse--~yEIyIVTAR~~~e~T~~WL~ 247 (260)
..|-|+..++|++|.+ +..|+|||.|. .+.-.+||.
T Consensus 531 a~p~~~l~~~L~~L~~d~~~~V~IvSGR~-~~~L~~~~~ 568 (797)
T PLN03063 531 LGLHPELKETLKALCSDPKTTVVVLSRSG-KDILDKNFG 568 (797)
T ss_pred CCCCHHHHHHHHHHHcCCCCEEEEEeCCC-HHHHHHHhC
Confidence 3556889999999976 57899999983 333445553
No 118
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=62.97 E-value=5 Score=35.36 Aligned_cols=43 Identities=16% Similarity=0.008 Sum_probs=25.3
Q ss_pred CCCcccHHHHHHHHhhCCc--EEEEeCCCCchhHHHHHHHhCCCCccc
Q 024936 211 IHPLPGAQKALHKLSRYCL--GNMLSRTIPLNGLRSIIRDYFRRSTLA 256 (260)
Q Consensus 211 LpPIPGAqEvL~kLse~yE--IyIVTAR~~~e~T~~WL~eHFPfi~~~ 256 (260)
..|-+++.++|++|.+... |+|||.|.... .+|+. .+|.+.++
T Consensus 18 ~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~--~~~~~-~~~~i~l~ 62 (235)
T PF02358_consen 18 AVPPPELRELLRALAADPNNTVAIVSGRSLDD--LERFG-GIPNIGLA 62 (235)
T ss_dssp ----HHHHHHHHHHHHHSE--EEEE-SS-HHH--HHHH--S-SS-EEE
T ss_pred cCCCHHHHHHHHHHhccCCCEEEEEEeCCHHH--hHHhc-CCCCceEE
Confidence 3667999999999988544 99999996555 33442 35666654
No 119
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=62.79 E-value=14 Score=31.17 Aligned_cols=40 Identities=8% Similarity=-0.002 Sum_probs=27.9
Q ss_pred CCCcccHHHHHHHHhh-CCcEEEEeCCCCchhHHHHHHHhCC
Q 024936 211 IHPLPGAQKALHKLSR-YCLGNMLSRTIPLNGLRSIIRDYFR 251 (260)
Q Consensus 211 LpPIPGAqEvL~kLse-~yEIyIVTAR~~~e~T~~WL~eHFP 251 (260)
..+.||+.|+|++|++ ++.|+|+|+.........++ ++++
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~-~~~g 82 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVE-KALG 82 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHH-HHcC
Confidence 4677999999999976 58999999875323333333 4554
No 120
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=61.73 E-value=12 Score=34.16 Aligned_cols=17 Identities=24% Similarity=0.302 Sum_probs=13.6
Q ss_pred eEEEEeccchhHhHHHH
Q 024936 144 IVVAVDVDEVLGNFVSA 160 (260)
Q Consensus 144 mrIaIDIDGVLADfi~~ 160 (260)
|.|.+|||+|+.-.-+.
T Consensus 64 i~VsFDIDDTvLFsSp~ 80 (237)
T COG3700 64 IAVSFDIDDTVLFSSPG 80 (237)
T ss_pred eeEeeccCCeeEecccc
Confidence 68999999999855554
No 121
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=61.37 E-value=9.9 Score=40.92 Aligned_cols=24 Identities=17% Similarity=0.120 Sum_probs=17.8
Q ss_pred ccHHHHHHHHhh--CCcEEEEeCCCC
Q 024936 215 PGAQKALHKLSR--YCLGNMLSRTIP 238 (260)
Q Consensus 215 PGAqEvL~kLse--~yEIyIVTAR~~ 238 (260)
|+..++|++|.+ +..|+|||.|..
T Consensus 619 ~~~~~~L~~L~~d~g~~VaIvSGR~~ 644 (854)
T PLN02205 619 SKSIDILNTLCRDKNNMVFIVSARSR 644 (854)
T ss_pred HHHHHHHHHHHhcCCCEEEEEeCCCH
Confidence 677888888843 567888888843
No 122
>PTZ00174 phosphomannomutase; Provisional
Probab=61.00 E-value=4.5 Score=36.07 Aligned_cols=14 Identities=36% Similarity=0.527 Sum_probs=11.7
Q ss_pred CeEEEEeccchhHh
Q 024936 143 KIVVAVDVDEVLGN 156 (260)
Q Consensus 143 KmrIaIDIDGVLAD 156 (260)
.+.|++||||||.+
T Consensus 5 ~klia~DlDGTLL~ 18 (247)
T PTZ00174 5 KTILLFDVDGTLTK 18 (247)
T ss_pred CeEEEEECcCCCcC
Confidence 35799999999993
No 123
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=59.90 E-value=16 Score=38.81 Aligned_cols=21 Identities=14% Similarity=0.306 Sum_probs=17.0
Q ss_pred eEEEEeccchhH--hHHHHHHHH
Q 024936 144 IVVAVDVDEVLG--NFVSALNRF 164 (260)
Q Consensus 144 mrIaIDIDGVLA--Dfi~~fnk~ 164 (260)
+.|.-||||||+ |.+.++.-.
T Consensus 531 kIVISDIDGTITKSDvLGh~lp~ 553 (738)
T KOG2116|consen 531 KIVISDIDGTITKSDVLGHVLPM 553 (738)
T ss_pred cEEEecCCCceEhhhhhhhhhhh
Confidence 477889999999 788877666
No 124
>PF10045 DUF2280: Uncharacterized conserved protein (DUF2280); InterPro: IPR018738 This entry is represented by Burkholderia phage Bups phi1, Orf2.36. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches.
Probab=59.61 E-value=3.9 Score=33.64 Aligned_cols=63 Identities=16% Similarity=0.211 Sum_probs=43.4
Q ss_pred hHHHHHHHHHHHHhCCCcccccceeeeeeeecCCCHHHHHHHHHHHhcC--cCCCCCCCCcccHHHHH
Q 024936 156 NFVSALNRFIADRYSLNHSVSEYHVYEFFKIWNCSRDEADLRVHEFFKT--PYFKTGIHPLPGAQKAL 221 (260)
Q Consensus 156 Dfi~~fnk~~Ne~yG~nltveD~~~Yd~~kv~gvs~EE~~~~l~ef~e~--~~Ff~~LpPIPGAqEvL 221 (260)
|+-+...+..+++||..++...+..||-.+.-|- .+.+.|.++|++ ..|..++.-||.|..+.
T Consensus 20 dTPs~v~~aVk~eFgi~vsrQqve~yDPTK~aG~---~Ls~k~~~lF~~TR~~F~~~~~~IpIAnka~ 84 (104)
T PF10045_consen 20 DTPSEVAEAVKEEFGIDVSRQQVESYDPTKRAGR---DLSKKWVDLFEETRKRFLEETADIPIANKAY 84 (104)
T ss_pred CCHHHHHHHHHHHhCCccCHHHHHHcCchHHHHH---HHHHHHHHHHHHHHHHHHHhHHhccchHHHH
Confidence 5677778889999999999888877877776652 222333444433 36666777788877653
No 125
>PRK10444 UMP phosphatase; Provisional
Probab=58.95 E-value=16 Score=33.17 Aligned_cols=25 Identities=24% Similarity=0.279 Sum_probs=20.7
Q ss_pred CCcccHHHHHHHHhh-CCcEEEEeCC
Q 024936 212 HPLPGAQKALHKLSR-YCLGNMLSRT 236 (260)
Q Consensus 212 pPIPGAqEvL~kLse-~yEIyIVTAR 236 (260)
.++|||.|+|++|++ +..++++|++
T Consensus 17 ~~~p~a~~~l~~L~~~g~~~~~~Tn~ 42 (248)
T PRK10444 17 VAVPGAAEFLHRILDKGLPLVLLTNY 42 (248)
T ss_pred eeCccHHHHHHHHHHCCCeEEEEeCC
Confidence 457899999999976 6888999988
No 126
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=57.89 E-value=4.4 Score=34.81 Aligned_cols=11 Identities=36% Similarity=0.374 Sum_probs=10.1
Q ss_pred EEEeccchhHh
Q 024936 146 VAVDVDEVLGN 156 (260)
Q Consensus 146 IaIDIDGVLAD 156 (260)
|++||||||.+
T Consensus 2 i~~DlDGTLL~ 12 (221)
T TIGR02463 2 VFSDLDGTLLD 12 (221)
T ss_pred EEEeCCCCCcC
Confidence 89999999995
No 127
>PRK10976 putative hydrolase; Provisional
Probab=57.80 E-value=5.2 Score=35.36 Aligned_cols=13 Identities=46% Similarity=0.442 Sum_probs=11.4
Q ss_pred eEEEEeccchhHh
Q 024936 144 IVVAVDVDEVLGN 156 (260)
Q Consensus 144 mrIaIDIDGVLAD 156 (260)
+.|++||||||.+
T Consensus 3 kli~~DlDGTLl~ 15 (266)
T PRK10976 3 QVVASDLDGTLLS 15 (266)
T ss_pred eEEEEeCCCCCcC
Confidence 4799999999994
No 128
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=56.99 E-value=17 Score=32.53 Aligned_cols=23 Identities=17% Similarity=0.270 Sum_probs=18.6
Q ss_pred CcccHHHHHHHHhh-CCcEEEEeC
Q 024936 213 PLPGAQKALHKLSR-YCLGNMLSR 235 (260)
Q Consensus 213 PIPGAqEvL~kLse-~yEIyIVTA 235 (260)
++|+|.|+|++|.+ +..++|+|.
T Consensus 18 ~i~~a~~~l~~l~~~g~~~~~~Tn 41 (249)
T TIGR01457 18 RIPEAETFVHELQKRDIPYLFVTN 41 (249)
T ss_pred eCcCHHHHHHHHHHCCCeEEEEeC
Confidence 46788899998866 678889986
No 129
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=56.58 E-value=5.1 Score=35.20 Aligned_cols=13 Identities=38% Similarity=0.483 Sum_probs=11.3
Q ss_pred eEEEEeccchhHh
Q 024936 144 IVVAVDVDEVLGN 156 (260)
Q Consensus 144 mrIaIDIDGVLAD 156 (260)
+.|++||||||.+
T Consensus 4 kli~~DlDGTLl~ 16 (272)
T PRK10530 4 RVIALDLDGTLLT 16 (272)
T ss_pred cEEEEeCCCceEC
Confidence 4789999999993
No 130
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=56.52 E-value=6.2 Score=35.46 Aligned_cols=15 Identities=20% Similarity=0.381 Sum_probs=12.8
Q ss_pred CCeEEEEeccchhHh
Q 024936 142 GKIVVAVDVDEVLGN 156 (260)
Q Consensus 142 ~KmrIaIDIDGVLAD 156 (260)
.+..|++||||||.+
T Consensus 6 ~~~lI~~DlDGTLL~ 20 (271)
T PRK03669 6 DPLLIFTDLDGTLLD 20 (271)
T ss_pred CCeEEEEeCccCCcC
Confidence 456899999999994
No 131
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=55.08 E-value=25 Score=31.59 Aligned_cols=12 Identities=17% Similarity=0.210 Sum_probs=10.6
Q ss_pred EEEEeccchhHh
Q 024936 145 VVAVDVDEVLGN 156 (260)
Q Consensus 145 rIaIDIDGVLAD 156 (260)
.|++||||||.+
T Consensus 3 ~~~~D~DGtl~~ 14 (249)
T TIGR01457 3 GYLIDLDGTMYK 14 (249)
T ss_pred EEEEeCCCceEc
Confidence 689999999984
No 132
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=54.94 E-value=6 Score=33.94 Aligned_cols=13 Identities=23% Similarity=0.570 Sum_probs=11.1
Q ss_pred eEEEEeccchhHh
Q 024936 144 IVVAVDVDEVLGN 156 (260)
Q Consensus 144 mrIaIDIDGVLAD 156 (260)
+.|++||||||.+
T Consensus 4 kli~~DlDGTLl~ 16 (230)
T PRK01158 4 KAIAIDIDGTITD 16 (230)
T ss_pred eEEEEecCCCcCC
Confidence 4788999999993
No 133
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=54.86 E-value=19 Score=31.37 Aligned_cols=27 Identities=11% Similarity=0.033 Sum_probs=23.7
Q ss_pred CCCCcccHHHHHHHHhh-CCcEEEEeCC
Q 024936 210 GIHPLPGAQKALHKLSR-YCLGNMLSRT 236 (260)
Q Consensus 210 ~LpPIPGAqEvL~kLse-~yEIyIVTAR 236 (260)
..++.||+.|+|+.|.+ ++.+.|+|+.
T Consensus 43 ~~~l~pGv~elL~~Lk~~G~~l~I~Sn~ 70 (174)
T TIGR01685 43 EVTLIKEVRDVLQTLKDAGTYLATASWN 70 (174)
T ss_pred EEEEcccHHHHHHHHHHCCCEEEEEeCC
Confidence 56788999999999976 6899999976
No 134
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=54.13 E-value=15 Score=33.97 Aligned_cols=27 Identities=26% Similarity=0.284 Sum_probs=21.9
Q ss_pred CCCCcccHHHHHHHHhh-CCcEEEEeCC
Q 024936 210 GIHPLPGAQKALHKLSR-YCLGNMLSRT 236 (260)
Q Consensus 210 ~LpPIPGAqEvL~kLse-~yEIyIVTAR 236 (260)
.-....++++.|++|++ ++.|.++|.-
T Consensus 111 ~~~~~~~~~~~lq~lR~~g~~l~iisN~ 138 (237)
T KOG3085|consen 111 AWKYLDGMQELLQKLRKKGTILGIISNF 138 (237)
T ss_pred CceeccHHHHHHHHHHhCCeEEEEecCC
Confidence 34677899999999977 5688888876
No 135
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=53.87 E-value=6.1 Score=33.96 Aligned_cols=12 Identities=42% Similarity=0.728 Sum_probs=10.8
Q ss_pred EEEEeccchhHh
Q 024936 145 VVAVDVDEVLGN 156 (260)
Q Consensus 145 rIaIDIDGVLAD 156 (260)
.|++||||||.+
T Consensus 3 ~v~~DlDGTLl~ 14 (215)
T TIGR01487 3 LVAIDIDGTLTE 14 (215)
T ss_pred EEEEecCCCcCC
Confidence 689999999994
No 136
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=53.51 E-value=6.6 Score=34.99 Aligned_cols=13 Identities=31% Similarity=0.248 Sum_probs=11.3
Q ss_pred eEEEEeccchhHh
Q 024936 144 IVVAVDVDEVLGN 156 (260)
Q Consensus 144 mrIaIDIDGVLAD 156 (260)
+.|++||||||.+
T Consensus 3 kli~~DlDGTLl~ 15 (272)
T PRK15126 3 RLAAFDMDGTLLM 15 (272)
T ss_pred cEEEEeCCCcCcC
Confidence 4799999999993
No 137
>PRK15455 PrkA family serine protein kinase; Provisional
Probab=53.12 E-value=21 Score=37.59 Aligned_cols=74 Identities=11% Similarity=0.113 Sum_probs=46.0
Q ss_pred EEeccchhH--hHHHHHHHHHHHHhCCCcccccceeeeeeeecCCCHHHHHHHHHHHhcCcCCCCCCCCcccHHHHHHHH
Q 024936 147 AVDVDEVLG--NFVSALNRFIADRYSLNHSVSEYHVYEFFKIWNCSRDEADLRVHEFFKTPYFKTGIHPLPGAQKALHKL 224 (260)
Q Consensus 147 aIDIDGVLA--Dfi~~fnk~~Ne~yG~nltveD~~~Yd~~kv~gvs~EE~~~~l~ef~e~~~Ff~~LpPIPGAqEvL~kL 224 (260)
.|++||||. .-.+.|+++.|.+.+.-+. +-+..-+.=-++-+++|. +++.+.+....+. +.+..|++.+++..+
T Consensus 292 ~i~~D~vIiaHsNE~E~~~F~~nk~nEA~~-DRi~~V~VPY~lr~~eE~--kIYeKll~~s~l~-~~hiAPhtle~aA~f 367 (644)
T PRK15455 292 AIPFDGIILAHSNESEWQTFRNNKNNEAFL-DRIYIVKVPYCLRVSEEI--KIYEKLLRNSELA-HAPCAPGTLEMLARF 367 (644)
T ss_pred eeccceeEEecCCHHHHHHHhcCccchhhh-ceEEEEeCCccCChhHHH--HHHHHHhcCcccc-CCCcCccHHHHHHHH
Confidence 799999998 4677778887765544332 112111111234454543 6677777777654 789999998865543
No 138
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=53.02 E-value=22 Score=32.28 Aligned_cols=24 Identities=25% Similarity=0.397 Sum_probs=18.7
Q ss_pred CcccHHHHHHHHhh-CCcEEEEeCC
Q 024936 213 PLPGAQKALHKLSR-YCLGNMLSRT 236 (260)
Q Consensus 213 PIPGAqEvL~kLse-~yEIyIVTAR 236 (260)
++|||.|+|++|.+ +..++++|++
T Consensus 19 ~~~ga~e~l~~L~~~g~~~~~~Tnn 43 (279)
T TIGR01452 19 VVPGAPELLDRLARAGKAALFVTNN 43 (279)
T ss_pred eCcCHHHHHHHHHHCCCeEEEEeCC
Confidence 56788888888866 5688888886
No 139
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=52.48 E-value=4.9 Score=34.28 Aligned_cols=11 Identities=36% Similarity=0.646 Sum_probs=9.7
Q ss_pred EEEeccchhHh
Q 024936 146 VAVDVDEVLGN 156 (260)
Q Consensus 146 IaIDIDGVLAD 156 (260)
|++||||||.+
T Consensus 1 i~~DlDGTLl~ 11 (225)
T TIGR01482 1 IASDIDGTLTD 11 (225)
T ss_pred CeEeccCccCC
Confidence 68999999994
No 140
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=52.22 E-value=27 Score=32.64 Aligned_cols=41 Identities=22% Similarity=0.214 Sum_probs=28.7
Q ss_pred CCCcccHHHHHHHHhh-----CCcEEEEeCCC--CchhHHHHHHHhCC
Q 024936 211 IHPLPGAQKALHKLSR-----YCLGNMLSRTI--PLNGLRSIIRDYFR 251 (260)
Q Consensus 211 LpPIPGAqEvL~kLse-----~yEIyIVTAR~--~~e~T~~WL~eHFP 251 (260)
-+++|||.|+|++|.+ +..++++|+.. ......+-|.+.++
T Consensus 15 ~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG 62 (321)
T TIGR01456 15 KKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLG 62 (321)
T ss_pred ccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcC
Confidence 3668999999999976 78999999873 33344444444443
No 141
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=51.71 E-value=7.2 Score=34.45 Aligned_cols=13 Identities=31% Similarity=0.388 Sum_probs=11.2
Q ss_pred eEEEEeccchhHh
Q 024936 144 IVVAVDVDEVLGN 156 (260)
Q Consensus 144 mrIaIDIDGVLAD 156 (260)
+.|++||||||.+
T Consensus 4 kli~~DlDGTLl~ 16 (270)
T PRK10513 4 KLIAIDMDGTLLL 16 (270)
T ss_pred EEEEEecCCcCcC
Confidence 4789999999993
No 142
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=51.19 E-value=11 Score=31.91 Aligned_cols=22 Identities=23% Similarity=0.347 Sum_probs=18.4
Q ss_pred ccHHHHHHHHhh-CCcEEEEeCC
Q 024936 215 PGAQKALHKLSR-YCLGNMLSRT 236 (260)
Q Consensus 215 PGAqEvL~kLse-~yEIyIVTAR 236 (260)
|++.++|++|.+ +|.|+|||.=
T Consensus 32 ~~v~~~L~~l~~~Gy~IvIvTNQ 54 (159)
T PF08645_consen 32 PGVPEALRELHKKGYKIVIVTNQ 54 (159)
T ss_dssp TTHHHHHHHHHHTTEEEEEEEE-
T ss_pred hhHHHHHHHHHhcCCeEEEEeCc
Confidence 468899999966 8999999987
No 143
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=50.24 E-value=30 Score=32.48 Aligned_cols=27 Identities=30% Similarity=0.381 Sum_probs=24.0
Q ss_pred CCCCcccHHHHHHHHhh-CCcEEEEeCC
Q 024936 210 GIHPLPGAQKALHKLSR-YCLGNMLSRT 236 (260)
Q Consensus 210 ~LpPIPGAqEvL~kLse-~yEIyIVTAR 236 (260)
+-.++|||.|.|++|++ +-.+++||+.
T Consensus 22 G~~~ipga~e~l~~L~~~g~~~iflTNn 49 (269)
T COG0647 22 GNEAIPGAAEALKRLKAAGKPVIFLTNN 49 (269)
T ss_pred CCccCchHHHHHHHHHHcCCeEEEEeCC
Confidence 56889999999999977 5799999998
No 144
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=50.14 E-value=74 Score=29.33 Aligned_cols=32 Identities=16% Similarity=0.042 Sum_probs=26.4
Q ss_pred CCCCcccHHHHHHHHhh-CCcEEEEeCCCCchh
Q 024936 210 GIHPLPGAQKALHKLSR-YCLGNMLSRTIPLNG 241 (260)
Q Consensus 210 ~LpPIPGAqEvL~kLse-~yEIyIVTAR~~~e~ 241 (260)
..|+.|+|+++|+++.. +..|||-|+-....+
T Consensus 101 kahlypDav~~ik~wk~~g~~vyiYSSGSV~AQ 133 (229)
T COG4229 101 KAHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQ 133 (229)
T ss_pred ccccCHhHHHHHHHHHHcCCcEEEEcCCCchhH
Confidence 46999999999999976 789999998854443
No 145
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=50.05 E-value=31 Score=32.62 Aligned_cols=16 Identities=31% Similarity=0.368 Sum_probs=13.9
Q ss_pred CCCeEEEEeccchhHh
Q 024936 141 HGKIVVAVDVDEVLGN 156 (260)
Q Consensus 141 ~~KmrIaIDIDGVLAD 156 (260)
....|||+|-|+||.+
T Consensus 119 ~~qlRIAFDgDaVLfs 134 (264)
T PF06189_consen 119 DDQLRIAFDGDAVLFS 134 (264)
T ss_pred CCceEEEEcCCeEeec
Confidence 4668999999999985
No 146
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=49.63 E-value=25 Score=32.92 Aligned_cols=23 Identities=22% Similarity=0.196 Sum_probs=15.9
Q ss_pred EEEEeccchhHh---HHHHHHHHHHH
Q 024936 145 VVAVDVDEVLGN---FVSALNRFIAD 167 (260)
Q Consensus 145 rIaIDIDGVLAD---fi~~fnk~~Ne 167 (260)
-|.+||||||.+ .++...+.++.
T Consensus 2 ~~ifD~DGvL~~g~~~i~ga~eal~~ 27 (321)
T TIGR01456 2 GFAFDIDGVLFRGKKPIAGASDALRR 27 (321)
T ss_pred EEEEeCcCceECCccccHHHHHHHHH
Confidence 478999999994 55555544443
No 147
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=49.14 E-value=11 Score=31.19 Aligned_cols=27 Identities=26% Similarity=0.229 Sum_probs=23.3
Q ss_pred CCCCcccHHHHHHHHhh-CCcEEEEeCC
Q 024936 210 GIHPLPGAQKALHKLSR-YCLGNMLSRT 236 (260)
Q Consensus 210 ~LpPIPGAqEvL~kLse-~yEIyIVTAR 236 (260)
.-+|.||+.++|++|++ +..++++|.-
T Consensus 125 ~d~~~~~~~~~l~~L~~~Gi~~~i~TGD 152 (215)
T PF00702_consen 125 RDPLRPGAKEALQELKEAGIKVAILTGD 152 (215)
T ss_dssp EEEBHTTHHHHHHHHHHTTEEEEEEESS
T ss_pred cCcchhhhhhhhhhhhccCcceeeeecc
Confidence 34889999999999987 5899999954
No 148
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=47.79 E-value=13 Score=38.03 Aligned_cols=29 Identities=17% Similarity=0.360 Sum_probs=22.1
Q ss_pred CCCCeEEEEeccchhH--hHHHHHHHHHHHH
Q 024936 140 LHGKIVVAVDVDEVLG--NFVSALNRFIADR 168 (260)
Q Consensus 140 ~~~KmrIaIDIDGVLA--Dfi~~fnk~~Ne~ 168 (260)
-.+++.|..||||||+ |++.++..++-+.
T Consensus 372 r~n~kiVVsDiDGTITkSD~~Ghv~~miGkd 402 (580)
T COG5083 372 RNNKKIVVSDIDGTITKSDALGHVKQMIGKD 402 (580)
T ss_pred eCCCcEEEEecCCcEEehhhHHHHHHHhccc
Confidence 3467889999999999 7887777665433
No 149
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=47.35 E-value=17 Score=29.33 Aligned_cols=13 Identities=31% Similarity=0.363 Sum_probs=11.3
Q ss_pred EEEEeccchhHhH
Q 024936 145 VVAVDVDEVLGNF 157 (260)
Q Consensus 145 rIaIDIDGVLADf 157 (260)
.|++|+||||.+.
T Consensus 2 li~~DlD~Tl~~~ 14 (128)
T TIGR01681 2 VIVFDLDNTLWTG 14 (128)
T ss_pred EEEEeCCCCCCCC
Confidence 6889999999965
No 150
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=46.67 E-value=15 Score=32.63 Aligned_cols=39 Identities=21% Similarity=0.207 Sum_probs=28.9
Q ss_pred CCcccHHHHHHHHhh-CCcEEEEeCC-----C-----CchhHHHHHHHhC
Q 024936 212 HPLPGAQKALHKLSR-YCLGNMLSRT-----I-----PLNGLRSIIRDYF 250 (260)
Q Consensus 212 pPIPGAqEvL~kLse-~yEIyIVTAR-----~-----~~e~T~~WL~eHF 250 (260)
..+||+.++|.+|.+ +|.|+|||.- . ....-.+|+.+-|
T Consensus 31 ~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l 80 (181)
T COG0241 31 QFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKIL 80 (181)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHH
Confidence 456999999999977 8999999985 1 1344566665544
No 151
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=44.86 E-value=9.3 Score=33.65 Aligned_cols=11 Identities=36% Similarity=0.537 Sum_probs=9.9
Q ss_pred EEEeccchhHh
Q 024936 146 VAVDVDEVLGN 156 (260)
Q Consensus 146 IaIDIDGVLAD 156 (260)
|++||||||.+
T Consensus 2 i~~DlDGTLl~ 12 (256)
T TIGR00099 2 IFIDLDGTLLN 12 (256)
T ss_pred EEEeCCCCCCC
Confidence 78999999994
No 152
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=43.05 E-value=1.1e+02 Score=28.29 Aligned_cols=25 Identities=16% Similarity=0.181 Sum_probs=21.4
Q ss_pred CCcccHHHHHHHHhh-CCcEEEEeCC
Q 024936 212 HPLPGAQKALHKLSR-YCLGNMLSRT 236 (260)
Q Consensus 212 pPIPGAqEvL~kLse-~yEIyIVTAR 236 (260)
..-||+.|-++.|.+ +..||++|.-
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGG 113 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGG 113 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCC
Confidence 445999999999966 7899999976
No 153
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=40.24 E-value=12 Score=31.08 Aligned_cols=12 Identities=42% Similarity=0.697 Sum_probs=10.3
Q ss_pred EEEEeccchhHh
Q 024936 145 VVAVDVDEVLGN 156 (260)
Q Consensus 145 rIaIDIDGVLAD 156 (260)
.|++||||||.+
T Consensus 3 ~~~~D~Dgtl~~ 14 (154)
T TIGR01670 3 LLILDVDGVLTD 14 (154)
T ss_pred EEEEeCceeEEc
Confidence 578899999985
No 154
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=40.15 E-value=13 Score=30.74 Aligned_cols=13 Identities=15% Similarity=0.115 Sum_probs=11.2
Q ss_pred EEEEeccchhHhH
Q 024936 145 VVAVDVDEVLGNF 157 (260)
Q Consensus 145 rIaIDIDGVLADf 157 (260)
.|++|+||||++.
T Consensus 3 ~i~fDktGTLt~~ 15 (215)
T PF00702_consen 3 AICFDKTGTLTQG 15 (215)
T ss_dssp EEEEECCTTTBES
T ss_pred EEEEecCCCcccC
Confidence 6899999999853
No 155
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=40.07 E-value=14 Score=31.68 Aligned_cols=14 Identities=29% Similarity=0.437 Sum_probs=11.8
Q ss_pred CeEEEEeccchhHh
Q 024936 143 KIVVAVDVDEVLGN 156 (260)
Q Consensus 143 KmrIaIDIDGVLAD 156 (260)
...|++|+||||++
T Consensus 21 ikli~~D~Dgtl~~ 34 (183)
T PRK09484 21 IRLLICDVDGVFSD 34 (183)
T ss_pred ceEEEEcCCeeeec
Confidence 44788999999996
No 156
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=39.93 E-value=38 Score=28.95 Aligned_cols=27 Identities=11% Similarity=-0.079 Sum_probs=22.1
Q ss_pred CcccHHHHHHHHhh-CCcEEEEeCCCCc
Q 024936 213 PLPGAQKALHKLSR-YCLGNMLSRTIPL 239 (260)
Q Consensus 213 PIPGAqEvL~kLse-~yEIyIVTAR~~~ 239 (260)
+-|.++++|++|++ ++.++|+|.|...
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~~~ 48 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATGNVLC 48 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchH
Confidence 44689999999976 6899999999643
No 157
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=39.17 E-value=40 Score=28.86 Aligned_cols=27 Identities=11% Similarity=-0.031 Sum_probs=22.6
Q ss_pred CcccHHHHHHHHhh-CCcEEEEeCCCCc
Q 024936 213 PLPGAQKALHKLSR-YCLGNMLSRTIPL 239 (260)
Q Consensus 213 PIPGAqEvL~kLse-~yEIyIVTAR~~~ 239 (260)
+-|.+.++|++|.+ ++.++|+|+|...
T Consensus 19 i~~~~~~~i~~l~~~g~~~~~~TGR~~~ 46 (215)
T TIGR01487 19 ISERAIEAIRKAEKKGIPVSLVTGNTVP 46 (215)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCcch
Confidence 44789999999977 6899999999543
No 158
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=38.18 E-value=14 Score=32.75 Aligned_cols=11 Identities=27% Similarity=0.301 Sum_probs=9.9
Q ss_pred EEEeccchhHh
Q 024936 146 VAVDVDEVLGN 156 (260)
Q Consensus 146 IaIDIDGVLAD 156 (260)
|++||||||.+
T Consensus 2 i~~DlDGTLl~ 12 (225)
T TIGR02461 2 IFTDLDGTLLP 12 (225)
T ss_pred EEEeCCCCCcC
Confidence 78999999984
No 159
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=35.90 E-value=15 Score=32.60 Aligned_cols=11 Identities=27% Similarity=0.395 Sum_probs=9.9
Q ss_pred EEEeccchhHh
Q 024936 146 VAVDVDEVLGN 156 (260)
Q Consensus 146 IaIDIDGVLAD 156 (260)
|++||||||.+
T Consensus 2 i~~DlDGTll~ 12 (256)
T TIGR01486 2 IFTDLDGTLLD 12 (256)
T ss_pred EEEcCCCCCcC
Confidence 78999999995
No 160
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=35.89 E-value=22 Score=30.15 Aligned_cols=15 Identities=33% Similarity=0.299 Sum_probs=12.3
Q ss_pred CCeEEEEeccchhHh
Q 024936 142 GKIVVAVDVDEVLGN 156 (260)
Q Consensus 142 ~KmrIaIDIDGVLAD 156 (260)
.+..+++|+||||.+
T Consensus 12 ~~k~~~~D~Dgtl~~ 26 (166)
T TIGR01664 12 QSKVAAFDLDGTLIT 26 (166)
T ss_pred cCcEEEEeCCCceEe
Confidence 355789999999985
No 161
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=35.24 E-value=19 Score=34.62 Aligned_cols=14 Identities=21% Similarity=0.150 Sum_probs=0.0
Q ss_pred CeEEEEeccchhHh
Q 024936 143 KIVVAVDVDEVLGN 156 (260)
Q Consensus 143 KmrIaIDIDGVLAD 156 (260)
++.|++||||||.|
T Consensus 1 ~KLIftDLDGTLLd 14 (302)
T PRK12702 1 MRLVLSSLDGSLLD 14 (302)
T ss_pred CcEEEEeCCCCCcC
No 162
>KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only]
Probab=35.20 E-value=43 Score=33.71 Aligned_cols=30 Identities=33% Similarity=0.340 Sum_probs=26.6
Q ss_pred EEEEeccchhHhHHHHHHHHHHHHhCCCcc
Q 024936 145 VVAVDVDEVLGNFVSALNRFIADRYSLNHS 174 (260)
Q Consensus 145 rIaIDIDGVLADfi~~fnk~~Ne~yG~nlt 174 (260)
++.-||||||.=|...|.-.++++||++.+
T Consensus 199 VFiWDlDEtiIifhslL~gsya~~y~kd~~ 228 (468)
T KOG3107|consen 199 VFIWDLDETIIIFHSLLTGSYATRYGKDPR 228 (468)
T ss_pred EEEeeccchHHHHHHHhhhhhhhhccCCch
Confidence 677899999999999999999999997654
No 163
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=34.74 E-value=52 Score=30.87 Aligned_cols=43 Identities=14% Similarity=0.001 Sum_probs=31.7
Q ss_pred CCCcccHHHHHHHHhhCCc--EEEEeCCCCchhHHHHHHHhCCCCccc
Q 024936 211 IHPLPGAQKALHKLSRYCL--GNMLSRTIPLNGLRSIIRDYFRRSTLA 256 (260)
Q Consensus 211 LpPIPGAqEvL~kLse~yE--IyIVTAR~~~e~T~~WL~eHFPfi~~~ 256 (260)
.+|-++..+.|++|..+++ |+|+|.|... .-..|+. .|.+.++
T Consensus 39 a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~-~l~~~~~--v~~i~l~ 83 (266)
T COG1877 39 AVPDDRLLSLLQDLASDPRNVVAIISGRSLA-ELERLFG--VPGIGLI 83 (266)
T ss_pred cCCCHHHHHHHHHHHhcCCCeEEEEeCCCHH-HHHHhcC--CCCccEE
Confidence 4677889999999999888 9999998543 3345666 5555443
No 164
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=34.64 E-value=17 Score=31.36 Aligned_cols=13 Identities=38% Similarity=0.600 Sum_probs=11.3
Q ss_pred eEEEEeccchhHh
Q 024936 144 IVVAVDVDEVLGN 156 (260)
Q Consensus 144 mrIaIDIDGVLAD 156 (260)
..+.+|+||||+|
T Consensus 8 ~~~v~d~dGv~td 20 (169)
T TIGR02726 8 KLVILDVDGVMTD 20 (169)
T ss_pred eEEEEeCceeeEC
Confidence 3688999999996
No 165
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=34.09 E-value=41 Score=29.82 Aligned_cols=28 Identities=18% Similarity=0.012 Sum_probs=22.8
Q ss_pred CcccHHHHHHHHhh-CCcEEEEeCCCCch
Q 024936 213 PLPGAQKALHKLSR-YCLGNMLSRTIPLN 240 (260)
Q Consensus 213 PIPGAqEvL~kLse-~yEIyIVTAR~~~e 240 (260)
..+.++++|++|.+ +..++++|+|....
T Consensus 16 ~~~~~~~ai~~l~~~G~~~vi~TgR~~~~ 44 (225)
T TIGR02461 16 EPGPAREALEELKDLGFPIVFVSSKTRAE 44 (225)
T ss_pred CchHHHHHHHHHHHCCCEEEEEeCCCHHH
Confidence 44679999999977 68999999995443
No 166
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=33.95 E-value=35 Score=33.10 Aligned_cols=26 Identities=27% Similarity=0.213 Sum_probs=22.9
Q ss_pred CCCcccHHHHHHHHhh-CCcEEEEeCC
Q 024936 211 IHPLPGAQKALHKLSR-YCLGNMLSRT 236 (260)
Q Consensus 211 LpPIPGAqEvL~kLse-~yEIyIVTAR 236 (260)
..|.||..|.|.+|++ ++.++|||+.
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq 55 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQ 55 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECC
Confidence 5778999999999976 6999999993
No 167
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=33.75 E-value=42 Score=29.73 Aligned_cols=35 Identities=9% Similarity=-0.029 Sum_probs=25.6
Q ss_pred CcccHHHHHHHHhh-CCcEEEEeCCCCchhHHHHHHH
Q 024936 213 PLPGAQKALHKLSR-YCLGNMLSRTIPLNGLRSIIRD 248 (260)
Q Consensus 213 PIPGAqEvL~kLse-~yEIyIVTAR~~~e~T~~WL~e 248 (260)
.++.+.++|++|.+ ++.++|+|.|..... ..++++
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~-~~~~~~ 52 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEV-EYLRKE 52 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHH-HHHHHH
Confidence 45569999999977 689999999965433 334444
No 168
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=33.15 E-value=18 Score=31.61 Aligned_cols=21 Identities=14% Similarity=0.281 Sum_probs=14.6
Q ss_pred EEEeccchhHh---HHHHHHHHHH
Q 024936 146 VAVDVDEVLGN---FVSALNRFIA 166 (260)
Q Consensus 146 IaIDIDGVLAD---fi~~fnk~~N 166 (260)
|+.||||||.+ .++.+.++++
T Consensus 2 i~~DlDgTLl~~~~~~~~~~~~~~ 25 (236)
T TIGR02471 2 IITDLDNTLLGDDEGLASFVELLR 25 (236)
T ss_pred eEEeccccccCCHHHHHHHHHHHH
Confidence 78999999995 3444445544
No 169
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=32.41 E-value=20 Score=31.86 Aligned_cols=12 Identities=42% Similarity=0.697 Sum_probs=10.6
Q ss_pred EEEEeccchhHh
Q 024936 145 VVAVDVDEVLGN 156 (260)
Q Consensus 145 rIaIDIDGVLAD 156 (260)
.+..|+||||+|
T Consensus 10 Lli~DVDGvLTD 21 (170)
T COG1778 10 LLILDVDGVLTD 21 (170)
T ss_pred EEEEeccceeec
Confidence 577999999996
No 170
>smart00851 MGS MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in Carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine. This family also includes inosicase. The known structures in this family show a common phosphate binding site PUBMED:10526357.
Probab=31.53 E-value=69 Score=24.15 Aligned_cols=27 Identities=11% Similarity=0.067 Sum_probs=19.3
Q ss_pred HHHHHHHHhh-CCcEEEEeCCCCchhHHHHHHHh
Q 024936 217 AQKALHKLSR-YCLGNMLSRTIPLNGLRSIIRDY 249 (260)
Q Consensus 217 AqEvL~kLse-~yEIyIVTAR~~~e~T~~WL~eH 249 (260)
..+.+++|.+ +|+|| .| +.|.+||+++
T Consensus 2 ~~~~~~~l~~lG~~i~-AT-----~gTa~~L~~~ 29 (90)
T smart00851 2 LVELAKRLAELGFELV-AT-----GGTAKFLREA 29 (90)
T ss_pred HHHHHHHHHHCCCEEE-Ec-----cHHHHHHHHC
Confidence 3466677766 68885 66 6788888875
No 171
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=31.48 E-value=43 Score=34.30 Aligned_cols=24 Identities=13% Similarity=0.120 Sum_probs=20.7
Q ss_pred CcccHHHHHHHHhh-CCcEEEEeCC
Q 024936 213 PLPGAQKALHKLSR-YCLGNMLSRT 236 (260)
Q Consensus 213 PIPGAqEvL~kLse-~yEIyIVTAR 236 (260)
+.||+.+.|++|.+ +|.|+|||+-
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ 222 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQ 222 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECC
Confidence 45899999999966 7999999986
No 172
>COG1568 Predicted methyltransferases [General function prediction only]
Probab=30.66 E-value=36 Score=33.13 Aligned_cols=35 Identities=20% Similarity=0.131 Sum_probs=22.3
Q ss_pred CccCCCCCCCeE-EEEeccchhHhHHHHHHHHHHHHhCCC
Q 024936 134 GFFDSHLHGKIV-VAVDVDEVLGNFVSALNRFIADRYSLN 172 (260)
Q Consensus 134 ~~~~~~~~~Kmr-IaIDIDGVLADfi~~fnk~~Ne~yG~n 172 (260)
|++..-+++..+ ..||||+-|.+|+..+.+- +|.+
T Consensus 166 sia~aLt~mpk~iaVvDIDERli~fi~k~aee----~g~~ 201 (354)
T COG1568 166 SIALALTGMPKRIAVVDIDERLIKFIEKVAEE----LGYN 201 (354)
T ss_pred HHHHHhcCCCceEEEEechHHHHHHHHHHHHH----hCcc
Confidence 444432333334 4589999999998885554 6655
No 173
>PLN02887 hydrolase family protein
Probab=30.15 E-value=26 Score=36.24 Aligned_cols=17 Identities=24% Similarity=0.079 Sum_probs=0.0
Q ss_pred CCCCeEEEEeccchhHh
Q 024936 140 LHGKIVVAVDVDEVLGN 156 (260)
Q Consensus 140 ~~~KmrIaIDIDGVLAD 156 (260)
..+.+.|++||||||.+
T Consensus 305 ~~~iKLIa~DLDGTLLn 321 (580)
T PLN02887 305 KPKFSYIFCDMDGTLLN 321 (580)
T ss_pred ccCccEEEEeCCCCCCC
No 174
>PF11480 ImmE5: Colicin-E5 Imm protein; InterPro: IPR020127 The proteins in this entry are able to protect a cell, which harbors the ColE5 plasmid encoding colicin E5, against colicin E5.; PDB: 2DFX_I 2FHZ_A.
Probab=29.61 E-value=50 Score=26.28 Aligned_cols=20 Identities=10% Similarity=-0.082 Sum_probs=13.1
Q ss_pred HHHHHHHH-hhCCcEEEEeCC
Q 024936 217 AQKALHKL-SRYCLGNMLSRT 236 (260)
Q Consensus 217 AqEvL~kL-se~yEIyIVTAR 236 (260)
|.|-+++= ++.|++||||++
T Consensus 62 A~E~i~ed~s~~~daFivT~~ 82 (83)
T PF11480_consen 62 AIEFIREDASNGYDAFIVTIP 82 (83)
T ss_dssp HHHHHHHHHHTT--EEEEEE-
T ss_pred HHHHhhhhhccCccEEEEecc
Confidence 56666666 668999999975
No 175
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=29.36 E-value=62 Score=28.34 Aligned_cols=27 Identities=15% Similarity=0.084 Sum_probs=22.0
Q ss_pred CcccHHHHHHHHhh-CCcEEEEeCCCCc
Q 024936 213 PLPGAQKALHKLSR-YCLGNMLSRTIPL 239 (260)
Q Consensus 213 PIPGAqEvL~kLse-~yEIyIVTAR~~~ 239 (260)
+-|..+++|++|.+ ++.++|+|.|...
T Consensus 21 i~~~~~~ai~~~~~~G~~~~iaTGR~~~ 48 (272)
T PRK10530 21 ILPESLEALARAREAGYKVIIVTGRHHV 48 (272)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCChH
Confidence 44668999999977 6999999999643
No 176
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=28.70 E-value=50 Score=29.11 Aligned_cols=27 Identities=7% Similarity=-0.073 Sum_probs=22.2
Q ss_pred cccHHHHHHHHhh-CCcEEEEeCCCCch
Q 024936 214 LPGAQKALHKLSR-YCLGNMLSRTIPLN 240 (260)
Q Consensus 214 IPGAqEvL~kLse-~yEIyIVTAR~~~e 240 (260)
-+..+++|++|.+ ++.++|+|.|....
T Consensus 22 ~~~~~~ai~~l~~~G~~~~iaTGR~~~~ 49 (270)
T PRK10513 22 SPAVKQAIAAARAKGVNVVLTTGRPYAG 49 (270)
T ss_pred CHHHHHHHHHHHHCCCEEEEecCCChHH
Confidence 3668999999977 69999999996543
No 177
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=28.65 E-value=58 Score=27.45 Aligned_cols=24 Identities=17% Similarity=0.160 Sum_probs=16.3
Q ss_pred ccHHHHHHHHhhC-CcEEEEeCCCC
Q 024936 215 PGAQKALHKLSRY-CLGNMLSRTIP 238 (260)
Q Consensus 215 PGAqEvL~kLse~-yEIyIVTAR~~ 238 (260)
+.+.++|++|.+. ..++|+|.|..
T Consensus 20 ~~~~~~l~~l~~~g~~~~i~TGR~~ 44 (204)
T TIGR01484 20 PETIEALERLREAGVKVVLVTGRSL 44 (204)
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCH
Confidence 5566777777663 67777777743
No 178
>PRK00647 hypothetical protein; Validated
Probab=28.14 E-value=1.1e+02 Score=24.66 Aligned_cols=49 Identities=18% Similarity=0.211 Sum_probs=36.1
Q ss_pred CCCCccc-HHHHHHHH-hh-----CCcEEEEeCCC-------CchhHHHHHHHhCCCCccccc
Q 024936 210 GIHPLPG-AQKALHKL-SR-----YCLGNMLSRTI-------PLNGLRSIIRDYFRRSTLATT 258 (260)
Q Consensus 210 ~LpPIPG-AqEvL~kL-se-----~yEIyIVTAR~-------~~e~T~~WL~eHFPfi~~~~~ 258 (260)
..||+.| |-++|-++ ++ +-+|-|++... .......||.+.+|.-+-.||
T Consensus 34 ~ApPvdGKAN~ali~~LAk~l~vpks~I~Iv~G~tSr~K~v~i~~~~~~~l~~~~~~~~~~~~ 96 (96)
T PRK00647 34 TEVPEKGKANDAVIALLAKFLSLPKRDVTLIAGETSRKKKVLLPRSIKAILFEQFPSESSSTT 96 (96)
T ss_pred ecCCCCChHHHHHHHHHHHHhCCChhhEEEEecCCCCceEEEEChhHHHHHHHhhcccCCCCC
Confidence 4599999 66666655 55 34688887662 357799999999998776665
No 179
>PRK10976 putative hydrolase; Provisional
Probab=27.62 E-value=54 Score=28.90 Aligned_cols=26 Identities=15% Similarity=-0.005 Sum_probs=21.9
Q ss_pred cccHHHHHHHHhh-CCcEEEEeCCCCc
Q 024936 214 LPGAQKALHKLSR-YCLGNMLSRTIPL 239 (260)
Q Consensus 214 IPGAqEvL~kLse-~yEIyIVTAR~~~ 239 (260)
-+...++|++|.+ ++.++|+|.|...
T Consensus 21 s~~~~~ai~~l~~~G~~~~iaTGR~~~ 47 (266)
T PRK10976 21 SPYAKETLKLLTARGIHFVFATGRHHV 47 (266)
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCChH
Confidence 3668999999977 7999999999654
No 180
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=27.60 E-value=53 Score=29.20 Aligned_cols=28 Identities=11% Similarity=-0.069 Sum_probs=22.9
Q ss_pred CcccHHHHHHHHhh-CCcEEEEeCCCCch
Q 024936 213 PLPGAQKALHKLSR-YCLGNMLSRTIPLN 240 (260)
Q Consensus 213 PIPGAqEvL~kLse-~yEIyIVTAR~~~e 240 (260)
+-+..+++|++|.+ ++.++|+|+|....
T Consensus 20 i~~~~~~ai~~l~~~G~~~~iaTGR~~~~ 48 (272)
T PRK15126 20 LGEKTLSTLARLRERDITLTFATGRHVLE 48 (272)
T ss_pred CCHHHHHHHHHHHHCCCEEEEECCCCHHH
Confidence 44678999999977 68999999996543
No 181
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=27.13 E-value=87 Score=27.48 Aligned_cols=27 Identities=19% Similarity=0.015 Sum_probs=22.3
Q ss_pred CcccHHHHHHHHhh-CCcEEEEeCCCCc
Q 024936 213 PLPGAQKALHKLSR-YCLGNMLSRTIPL 239 (260)
Q Consensus 213 PIPGAqEvL~kLse-~yEIyIVTAR~~~ 239 (260)
+-+.+.++|++|.+ ++.++|+|.|...
T Consensus 17 i~~~~~~~i~~l~~~G~~~~iaTGR~~~ 44 (256)
T TIGR00099 17 ISPSTKEALAKLREKGIKVVLATGRPYK 44 (256)
T ss_pred cCHHHHHHHHHHHHCCCeEEEEeCCCHH
Confidence 34678999999976 6999999999643
No 182
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=26.15 E-value=99 Score=29.02 Aligned_cols=26 Identities=15% Similarity=0.029 Sum_probs=17.8
Q ss_pred CeEEEEeccchhHh---HHHHHHHHHHHH
Q 024936 143 KIVVAVDVDEVLGN---FVSALNRFIADR 168 (260)
Q Consensus 143 KmrIaIDIDGVLAD---fi~~fnk~~Ne~ 168 (260)
...+.+||||||-+ -++.-.+++++-
T Consensus 8 y~~~l~DlDGvl~~G~~~ipga~e~l~~L 36 (269)
T COG0647 8 YDGFLFDLDGVLYRGNEAIPGAAEALKRL 36 (269)
T ss_pred cCEEEEcCcCceEeCCccCchHHHHHHHH
Confidence 34699999999983 555555555543
No 183
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=25.29 E-value=42 Score=31.90 Aligned_cols=30 Identities=33% Similarity=0.360 Sum_probs=25.8
Q ss_pred EEEEeccchhHhHHHHHHHHHHHHhC--CCcc
Q 024936 145 VVAVDVDEVLGNFVSALNRFIADRYS--LNHS 174 (260)
Q Consensus 145 rIaIDIDGVLADfi~~fnk~~Ne~yG--~nlt 174 (260)
+..=||||||.=|.+.++-.|.+.|+ ++..
T Consensus 4 VfvWDlDETlIif~SLL~GsyA~~f~g~KD~~ 35 (274)
T TIGR01658 4 VYVWDMDETLILLHSLLNGSYAESFNGSKDHK 35 (274)
T ss_pred eEEEeccchHHHHHHhhcchHHHHcCCCcCcH
Confidence 45679999999999999999999998 6554
No 184
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=25.15 E-value=72 Score=27.30 Aligned_cols=27 Identities=11% Similarity=-0.077 Sum_probs=21.4
Q ss_pred CcccHHHHHHHHhh-CCcEEEEeCCCCc
Q 024936 213 PLPGAQKALHKLSR-YCLGNMLSRTIPL 239 (260)
Q Consensus 213 PIPGAqEvL~kLse-~yEIyIVTAR~~~ 239 (260)
+.+-++++|++|.+ +..++++|.|...
T Consensus 17 ~~~~~~~~l~~l~~~gi~~~i~TgR~~~ 44 (221)
T TIGR02463 17 DWQPAAPWLTRLQEAGIPVILCTSKTAA 44 (221)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEcCCCHH
Confidence 34448999999977 6899999999643
No 185
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=24.36 E-value=73 Score=30.83 Aligned_cols=27 Identities=26% Similarity=0.379 Sum_probs=23.2
Q ss_pred CCCCcccHHHHHHHHhh-CCcEEEEeCC
Q 024936 210 GIHPLPGAQKALHKLSR-YCLGNMLSRT 236 (260)
Q Consensus 210 ~LpPIPGAqEvL~kLse-~yEIyIVTAR 236 (260)
.-.||||+.|+|..|.+ +-.|+|||.-
T Consensus 36 g~~~ipGs~e~l~~L~~~gK~i~fvTNN 63 (306)
T KOG2882|consen 36 GEKPIPGSPEALNLLKSLGKQIIFVTNN 63 (306)
T ss_pred cCCCCCChHHHHHHHHHcCCcEEEEeCC
Confidence 34789999999999966 6789999987
No 186
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=23.58 E-value=65 Score=32.38 Aligned_cols=26 Identities=27% Similarity=0.236 Sum_probs=23.3
Q ss_pred CCCcccHHHHHHHHhh-CC-cEEEEeCC
Q 024936 211 IHPLPGAQKALHKLSR-YC-LGNMLSRT 236 (260)
Q Consensus 211 LpPIPGAqEvL~kLse-~y-EIyIVTAR 236 (260)
-++.||+.|+|++|++ +. +++++|+.
T Consensus 361 d~l~~~~~e~i~~L~~~Gi~~v~vvTgd 388 (536)
T TIGR01512 361 DEPRPDAAEAIAELKALGIEKVVMLTGD 388 (536)
T ss_pred ccchHHHHHHHHHHHHcCCCcEEEEcCC
Confidence 4788999999999977 68 99999986
No 187
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=23.54 E-value=1.3e+02 Score=29.31 Aligned_cols=26 Identities=19% Similarity=0.031 Sum_probs=23.1
Q ss_pred CCCcccHHHHHHHHhh-CCcEEEEeCC
Q 024936 211 IHPLPGAQKALHKLSR-YCLGNMLSRT 236 (260)
Q Consensus 211 LpPIPGAqEvL~kLse-~yEIyIVTAR 236 (260)
+.+-||..+.|++|++ +..++|||+.
T Consensus 183 v~~~pgl~elL~~Lr~~G~klfLvTNS 209 (343)
T TIGR02244 183 VLRDPKLPLFLSKLKEHGKKLFLLTNS 209 (343)
T ss_pred hccchhHHHHHHHHHHCCCeEEEEeCC
Confidence 4668999999999977 6899999998
No 188
>KOG2121 consensus Predicted metal-dependent hydrolase (beta-lactamase superfamily) [General function prediction only]
Probab=23.34 E-value=1.8e+02 Score=31.38 Aligned_cols=103 Identities=14% Similarity=0.160 Sum_probs=55.0
Q ss_pred ceeecCCCCCCCCCCCCccCCCCCCCeEEEEeccc-hhHhHHHHHHHHHHHHhCCCcccccceeeeeeeecCCCHHHHHH
Q 024936 118 ARLVNGRGSSERGNPLGFFDSHLHGKIVVAVDVDE-VLGNFVSALNRFIADRYSLNHSVSEYHVYEFFKIWNCSRDEADL 196 (260)
Q Consensus 118 ~~~~~~~~~~~~~~p~~~~~~~~~~KmrIaIDIDG-VLADfi~~fnk~~Ne~yG~nltveD~~~Yd~~kv~gvs~EE~~~ 196 (260)
.++.=|-|.+-..|.+..+.+ -|.||.|+ .|.|.-+--+-.+.+.||.+... + .-+
T Consensus 444 eIi~LGTGSaiPskyRNVSS~------lv~i~~~~~IlLDCGEgTlgql~R~YG~~~~~-~----------------~lr 500 (746)
T KOG2121|consen 444 EIIFLGTGSAIPSKYRNVSSI------LVRIDSDDSILLDCGEGTLGQLVRHYGVENVD-T----------------ALR 500 (746)
T ss_pred EEEEecCCccCCCcccceEEE------EEeccCCccEEeecCCchHHHHHHHhhhcchH-H----------------HHH
Confidence 356667787777776644443 57777788 66664333333345558842211 1 111
Q ss_pred HHHHHhcCcCCCCCCCCcccHHHHHHHHhh------CCcEEEEeCCCCchhHHHHHHHhC
Q 024936 197 RVHEFFKTPYFKTGIHPLPGAQKALHKLSR------YCLGNMLSRTIPLNGLRSIIRDYF 250 (260)
Q Consensus 197 ~l~ef~e~~~Ff~~LpPIPGAqEvL~kLse------~yEIyIVTAR~~~e~T~~WL~eHF 250 (260)
.+..+|-+....+ =.-|-.-+|+++.+ ...++||+ ...-++||+++-
T Consensus 501 ~LraI~ISHlHAD---Hh~Gl~~vL~~r~k~~k~~~~~pl~vv~----P~ql~~wl~~y~ 553 (746)
T KOG2121|consen 501 KLRAIFISHLHAD---HHLGLISVLQARTKLLKGVENSPLLVVA----PRQLKKWLQEYH 553 (746)
T ss_pred hHHHHHHHhhccc---ccccHHHHHHHHHHhccccccCceEEeC----hHHHHHHHHHHh
Confidence 2333333332221 12345566666644 23466666 466788998876
No 189
>PF00072 Response_reg: Response regulator receiver domain; InterPro: IPR001789 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. Bipartite response regulator proteins are involved in a two-component signal transduction system in bacteria, and certain eukaryotes like protozoa, that functions to detect and respond to environmental changes []. These systems have been detected during host invasion, drug resistance, motility, phosphate uptake, osmoregulation, and nitrogen fixation, amongst others []. The two-component system consists of a histidine protein kinase environmental sensor that phosphorylates the receiver domain of a response regulator protein; phosphorylation induces a conformational change in the response regulator, which activates the effector domain, triggering the cellular response []. The domains of the two-component proteins are highly modular, but the core structures and activities are maintained. The response regulators act as phosphorylation-activated switches to affect a cellular response, usually by transcriptional regulation. Most of these proteins consist of two domains, an N-terminal response regulator receiver domain, and a variable C-terminal effector domain with DNA-binding activity. This entry represents the response regulator receiver domain, which belongs to the CheY family, and receives the signal from the sensor partner in the two-component system.; GO: 0000156 two-component response regulator activity, 0000160 two-component signal transduction system (phosphorelay), 0006355 regulation of transcription, DNA-dependent; PDB: 2QR3_A 2QXY_A 1I3C_A 1JLK_A 2PKX_A 2PL1_A 3H1F_A 3H1E_A 3GWG_A 3H1G_A ....
Probab=23.30 E-value=1.2e+02 Score=22.21 Aligned_cols=87 Identities=13% Similarity=0.027 Sum_probs=45.5
Q ss_pred EEEeccchhHhHHHHHHHHHHHHhCCCcccccceeeeeeeecCCCHHHHHHHHHHHhcCcCCCCCCCCcccHHHHHHHHh
Q 024936 146 VAVDVDEVLGNFVSALNRFIADRYSLNHSVSEYHVYEFFKIWNCSRDEADLRVHEFFKTPYFKTGIHPLPGAQKALHKLS 225 (260)
Q Consensus 146 IaIDIDGVLADfi~~fnk~~Ne~yG~nltveD~~~Yd~~kv~gvs~EE~~~~l~ef~e~~~Ff~~LpPIPGAqEvL~kLs 225 (260)
+.||=|......+..+++. .|. +++... .+.+++...+...--+-.+.+--.+--.+.+++++|+
T Consensus 2 livd~~~~~~~~l~~~l~~----~~~----~~v~~~-------~~~~~~~~~~~~~~~d~iiid~~~~~~~~~~~~~~i~ 66 (112)
T PF00072_consen 2 LIVDDDPEIRELLEKLLER----AGY----EEVTTA-------SSGEEALELLKKHPPDLIIIDLELPDGDGLELLEQIR 66 (112)
T ss_dssp EEEESSHHHHHHHHHHHHH----TTE----EEEEEE-------SSHHHHHHHHHHSTESEEEEESSSSSSBHHHHHHHHH
T ss_pred EEEECCHHHHHHHHHHHHh----CCC----CEEEEE-------CCHHHHHHHhcccCceEEEEEeeeccccccccccccc
Confidence 5667777777666665551 222 111111 2345554444442211122211122245778888886
Q ss_pred h---CCcEEEEeCCCCchhHHHHHH
Q 024936 226 R---YCLGNMLSRTIPLNGLRSIIR 247 (260)
Q Consensus 226 e---~yEIyIVTAR~~~e~T~~WL~ 247 (260)
+ ...|+++|+........+.++
T Consensus 67 ~~~~~~~ii~~t~~~~~~~~~~~~~ 91 (112)
T PF00072_consen 67 QINPSIPIIVVTDEDDSDEVQEALR 91 (112)
T ss_dssp HHTTTSEEEEEESSTSHHHHHHHHH
T ss_pred cccccccEEEecCCCCHHHHHHHHH
Confidence 6 468899997766555555553
No 190
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=23.27 E-value=68 Score=32.53 Aligned_cols=28 Identities=21% Similarity=0.131 Sum_probs=24.1
Q ss_pred CCCCcccHHHHHHHHhh-CCcEEEEeCCC
Q 024936 210 GIHPLPGAQKALHKLSR-YCLGNMLSRTI 237 (260)
Q Consensus 210 ~LpPIPGAqEvL~kLse-~yEIyIVTAR~ 237 (260)
.-++.||+.|+|++|++ +++++++|+..
T Consensus 403 ~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~ 431 (562)
T TIGR01511 403 EDQLRPEAKEVIQALKRRGIEPVMLTGDN 431 (562)
T ss_pred cccccHHHHHHHHHHHHcCCeEEEEcCCC
Confidence 34788999999999977 79999999873
No 191
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=23.02 E-value=71 Score=32.15 Aligned_cols=27 Identities=26% Similarity=0.145 Sum_probs=23.9
Q ss_pred CCCCcccHHHHHHHHhh-C-CcEEEEeCC
Q 024936 210 GIHPLPGAQKALHKLSR-Y-CLGNMLSRT 236 (260)
Q Consensus 210 ~LpPIPGAqEvL~kLse-~-yEIyIVTAR 236 (260)
.-++.||+.|+|++|++ + +++.|+|+.
T Consensus 382 ~d~~~~g~~e~l~~L~~~g~i~v~ivTgd 410 (556)
T TIGR01525 382 RDQLRPEAKEAIAALKRAGGIKLVMLTGD 410 (556)
T ss_pred cccchHhHHHHHHHHHHcCCCeEEEEeCC
Confidence 34889999999999966 6 899999987
No 192
>COG1658 Small primase-like proteins (Toprim domain) [DNA replication, recombination, and repair]
Probab=22.51 E-value=2.6e+02 Score=23.69 Aligned_cols=54 Identities=11% Similarity=0.129 Sum_probs=36.0
Q ss_pred HHHHHhcCcCCCC-CCCCcccHHHHHHHHh---hCCcEEEEeCCC-CchhHHHHHHHhCCC
Q 024936 197 RVHEFFKTPYFKT-GIHPLPGAQKALHKLS---RYCLGNMLSRTI-PLNGLRSIIRDYFRR 252 (260)
Q Consensus 197 ~l~ef~e~~~Ff~-~LpPIPGAqEvL~kLs---e~yEIyIVTAR~-~~e~T~~WL~eHFPf 252 (260)
.+.+++..+.|.- +-.+. .++.+..|. +..+|+|.|-.. .-+.-..||.+|||.
T Consensus 23 ~l~~~~~~~~i~~~g~~i~--~~~~ie~i~~~~~~k~VIILTD~D~~Ge~Irk~l~~~l~~ 81 (127)
T COG1658 23 SLKRLGDAGVIITNGSAIN--SLETIELIKKAQKYKGVIILTDPDRKGERIRKKLKEYLPG 81 (127)
T ss_pred HHHHhcCCceEEEcCCccc--hHHHHHHHHHhhccCCEEEEeCCCcchHHHHHHHHHHhcc
Confidence 4667777766651 11111 245555554 466899999994 457789999999998
No 193
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=22.51 E-value=80 Score=26.79 Aligned_cols=27 Identities=11% Similarity=-0.101 Sum_probs=21.6
Q ss_pred CcccHHHHHHHHhh-CCcEEEEeCCCCc
Q 024936 213 PLPGAQKALHKLSR-YCLGNMLSRTIPL 239 (260)
Q Consensus 213 PIPGAqEvL~kLse-~yEIyIVTAR~~~ 239 (260)
+-+...++|++|++ ++.++|+|.|...
T Consensus 16 i~~~~~~al~~l~~~Gi~~~~aTGR~~~ 43 (225)
T TIGR01482 16 INESALEAIRKAESVGIPVVLVTGNSVQ 43 (225)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchH
Confidence 33667899999977 6899999999543
No 194
>PLN02382 probable sucrose-phosphatase
Probab=21.81 E-value=48 Score=32.53 Aligned_cols=15 Identities=13% Similarity=0.468 Sum_probs=12.8
Q ss_pred CCeEEEEeccchhHh
Q 024936 142 GKIVVAVDVDEVLGN 156 (260)
Q Consensus 142 ~KmrIaIDIDGVLAD 156 (260)
-+..|+.||||||.+
T Consensus 8 ~~~lI~sDLDGTLL~ 22 (413)
T PLN02382 8 PRLMIVSDLDHTMVD 22 (413)
T ss_pred CCEEEEEcCCCcCcC
Confidence 466899999999994
No 195
>KOG1736 consensus Glia maturation factor beta [Extracellular structures]
Probab=21.40 E-value=1e+02 Score=26.62 Aligned_cols=36 Identities=11% Similarity=0.046 Sum_probs=28.9
Q ss_pred ccHHHHHHHHhhCCcEEEEeCCCCchhHHHHHHHhCCC
Q 024936 215 PGAQKALHKLSRYCLGNMLSRTIPLNGLRSIIRDYFRR 252 (260)
Q Consensus 215 PGAqEvL~kLse~yEIyIVTAR~~~e~T~~WL~eHFPf 252 (260)
.||.+-|++-++-+.|+-|.+ ....|.+||++.+.|
T Consensus 107 Agak~~~~~~~~~~KvfEir~--tdD~t~e~l~E~L~~ 142 (143)
T KOG1736|consen 107 AGAKNMLVQTAELTKVFEIRS--TDDLTEEWLREKLEF 142 (143)
T ss_pred HHHHHHHHHHhhheEEEEecc--cccccHHHHHHHhhc
Confidence 588888888787777777654 677899999998876
No 196
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=21.30 E-value=47 Score=31.96 Aligned_cols=14 Identities=36% Similarity=0.373 Sum_probs=0.0
Q ss_pred CeEEEEeccchhHh
Q 024936 143 KIVVAVDVDEVLGN 156 (260)
Q Consensus 143 KmrIaIDIDGVLAD 156 (260)
...|++||||||.+
T Consensus 126 ~kvIvFDLDgTLi~ 139 (301)
T TIGR01684 126 PHVVVFDLDSTLIT 139 (301)
T ss_pred ceEEEEecCCCCcC
No 197
>cd01424 MGS_CPS_II Methylglyoxal synthase-like domain from type II glutamine-dependent carbamoyl phosphate synthetase (CSP). CSP, a CarA and CarB heterodimer, catalyzes the production of carbamoyl phosphate which is subsequently employed in the metabolic pathways responsible for the synthesis of pyrimidine nucleotides or arginine. The MGS-like domain is the C-terminal domain of CarB and appears to play a regulatory role in CPS function by binding allosteric effector molecules, including UMP and ornithine.
Probab=21.29 E-value=1.3e+02 Score=23.38 Aligned_cols=27 Identities=11% Similarity=0.070 Sum_probs=14.6
Q ss_pred HHHHHHHHhh-CCcEEEEeCCCCchhHHHHHHHh
Q 024936 217 AQKALHKLSR-YCLGNMLSRTIPLNGLRSIIRDY 249 (260)
Q Consensus 217 AqEvL~kLse-~yEIyIVTAR~~~e~T~~WL~eH 249 (260)
..+.+++|.+ +|+|| .| +.|.+||+++
T Consensus 15 ~~~~~~~l~~~G~~l~-aT-----~gT~~~l~~~ 42 (110)
T cd01424 15 AVEIAKRLAELGFKLV-AT-----EGTAKYLQEA 42 (110)
T ss_pred HHHHHHHHHHCCCEEE-Ec-----hHHHHHHHHc
Confidence 4445555544 56664 44 5566666653
No 198
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=21.17 E-value=84 Score=28.16 Aligned_cols=25 Identities=16% Similarity=-0.016 Sum_probs=21.2
Q ss_pred ccHHHHHHHHhh-CCcEEEEeCCCCc
Q 024936 215 PGAQKALHKLSR-YCLGNMLSRTIPL 239 (260)
Q Consensus 215 PGAqEvL~kLse-~yEIyIVTAR~~~ 239 (260)
+-+.++|++|.+ ++.|+|+|.|...
T Consensus 27 ~~~~~ai~~l~~~Gi~~viaTGR~~~ 52 (271)
T PRK03669 27 QPAAPWLTRLREAQVPVILCSSKTAA 52 (271)
T ss_pred HHHHHHHHHHHHcCCeEEEEcCCCHH
Confidence 568899999976 7999999999643
No 199
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=21.14 E-value=57 Score=34.78 Aligned_cols=16 Identities=38% Similarity=0.318 Sum_probs=12.9
Q ss_pred CCCeEEEEeccchhHh
Q 024936 141 HGKIVVAVDVDEVLGN 156 (260)
Q Consensus 141 ~~KmrIaIDIDGVLAD 156 (260)
..++.|+.||||||.+
T Consensus 414 ~~~KLIfsDLDGTLLd 429 (694)
T PRK14502 414 QFKKIVYTDLDGTLLN 429 (694)
T ss_pred ceeeEEEEECcCCCcC
Confidence 3556789999999995
No 200
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=21.13 E-value=1.4e+02 Score=27.99 Aligned_cols=110 Identities=15% Similarity=0.178 Sum_probs=59.0
Q ss_pred CCCeEEEEeccchhHh-------HHH-HHHHHHHHHhCCCcccccceeeeeeeec------------CCCHHHHHHHHHH
Q 024936 141 HGKIVVAVDVDEVLGN-------FVS-ALNRFIADRYSLNHSVSEYHVYEFFKIW------------NCSRDEADLRVHE 200 (260)
Q Consensus 141 ~~KmrIaIDIDGVLAD-------fi~-~fnk~~Ne~yG~nltveD~~~Yd~~kv~------------gvs~EE~~~~l~e 200 (260)
.+...+.+|||+||-. .+. .+.+++-+++|..-.-..--...+.+.| ..+.+|+ ++
T Consensus 13 ~~~~~l~FDiDdtLYp~St~i~~~~~~nI~~f~~eklgi~~e~a~~L~~~~yk~YG~t~aGL~~~~~~~d~deY----~~ 88 (244)
T KOG3109|consen 13 PNYKCLFFDIDDTLYPLSTGIQLMMRNNIQEFFVEKLGISEEEAEELRESLYKEYGLTMAGLKAVGYIFDADEY----HR 88 (244)
T ss_pred ccceEEEEecccccccCchhHHHHHHHHHHHHHHHHhCCChhhhHHHHHHHHHHHhHHHHHHHHhcccCCHHHH----HH
Confidence 3667899999999972 222 2346777777765431110000001222 2334554 44
Q ss_pred HhcCcCCCCCCCCcccHHHHHHHHhhCCcEEEEeCC-CC---chhHHHHHHHhCCCCcc
Q 024936 201 FFKTPYFKTGIHPLPGAQKALHKLSRYCLGNMLSRT-IP---LNGLRSIIRDYFRRSTL 255 (260)
Q Consensus 201 f~e~~~Ff~~LpPIPGAqEvL~kLse~yEIyIVTAR-~~---~e~T~~WL~eHFPfi~~ 255 (260)
|.+......++.|=+--++-|-.|.+.+ ..+-|.+ .. .-.|+-=|+.-|-+|+-
T Consensus 89 ~V~~~LPlq~LkPD~~LRnlLL~l~~r~-k~~FTNa~k~HA~r~Lk~LGieDcFegii~ 146 (244)
T KOG3109|consen 89 FVHGRLPLQDLKPDPVLRNLLLSLKKRR-KWIFTNAYKVHAIRILKKLGIEDCFEGIIC 146 (244)
T ss_pred HhhccCcHhhcCCCHHHHHHHHhCcccc-EEEecCCcHHHHHHHHHHhChHHhccceeE
Confidence 5555545556888777777777776665 5566666 22 22244444445554443
No 201
>KOG2938 consensus Predicted inosine-uridine preferring nucleoside hydrolase [Nucleotide transport and metabolism]
Probab=21.12 E-value=1.9e+02 Score=28.43 Aligned_cols=73 Identities=14% Similarity=0.122 Sum_probs=49.3
Q ss_pred CCCCeEEEEeccchhHhHHHHHHHHHHHHhCCCcccccceeeeeeeecC-CCHHHHHHHHHHHhcCcCCCCCCCCcccHH
Q 024936 140 LHGKIVVAVDVDEVLGNFVSALNRFIADRYSLNHSVSEYHVYEFFKIWN-CSRDEADLRVHEFFKTPYFKTGIHPLPGAQ 218 (260)
Q Consensus 140 ~~~KmrIaIDIDGVLADfi~~fnk~~Ne~yG~nltveD~~~Yd~~kv~g-vs~EE~~~~l~ef~e~~~Ff~~LpPIPGAq 218 (260)
...+..|.||.|++=-|-+..++.+.. .++ ..-.+..++| .+.++......++++--+. .++|+..||+
T Consensus 18 ~~~~~~iiid~D~~~Dd~~al~la~~~----~~~-----~ilglTtv~Gn~~~~~t~~NA~~~L~l~~r-~dIPV~~Ga~ 87 (350)
T KOG2938|consen 18 ASYKRKIIIDCDPGSDDAFALLLALLG----PEL-----EILGLTTVHGNVTVEDTDRNALDLLSLLGR-LDIPVYEGAA 87 (350)
T ss_pred cccceeEEEeCCCCcccHHHHHHHhcC----ccc-----eeEeeeEeeCCccHhhhhhhHHHHHHhcCC-cCCCchhccc
Confidence 345678999999999998888888843 222 2233344454 4455665556666666665 4899999998
Q ss_pred HHHH
Q 024936 219 KALH 222 (260)
Q Consensus 219 EvL~ 222 (260)
+.|.
T Consensus 88 kpl~ 91 (350)
T KOG2938|consen 88 KPLI 91 (350)
T ss_pred cccc
Confidence 8663
No 202
>KOG3350 consensus Uncharacterized conserved protein [Function unknown]
Probab=20.94 E-value=1.3e+02 Score=27.59 Aligned_cols=70 Identities=13% Similarity=0.139 Sum_probs=48.0
Q ss_pred ccceeeeeeeecCCCHHHHHHHHHHHhcCcCCCCCCCCcccHHHHHHHHhh-CCcEEEEeCCCCchhHHHHHHHhCC
Q 024936 176 SEYHVYEFFKIWNCSRDEADLRVHEFFKTPYFKTGIHPLPGAQKALHKLSR-YCLGNMLSRTIPLNGLRSIIRDYFR 251 (260)
Q Consensus 176 eD~~~Yd~~kv~gvs~EE~~~~l~ef~e~~~Ff~~LpPIPGAqEvL~kLse-~yEIyIVTAR~~~e~T~~WL~eHFP 251 (260)
++|.-|++-...+. ++++...++-+.-+|-|. ..+=+--.-+.++.|.. .-.|+.+| -+.-++|+.+-+|
T Consensus 115 ~eFvfYDyN~p~dl-p~~lk~~fdiivaDPPfL-~~eCl~Kts~tik~L~r~~~kvilCt----Geimee~~s~~l~ 185 (217)
T KOG3350|consen 115 TEFVFYDYNCPLDL-PDELKAHFDIIVADPPFL-SEECLAKTSETIKRLQRNQKKVILCT----GEIMEEWASALLP 185 (217)
T ss_pred ceeEEeccCCCCCC-HHHHHhcccEEEeCCccc-cchhhhhhHHHHHHHhcCCceEEEec----hhHhHHHHHHHhh
Confidence 45556655555555 556656666667777777 44555566788999966 45888898 4667789888888
No 203
>cd00532 MGS-like MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase, which catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The family also includes the C-terminal domain in carbamoyl phosphate synthetase (CPS) where it catalyzes the last phosphorylation of a coaboxyphosphate intermediate to form the product carbamoyl phosphate and may also play a regulatory role. This family also includes inosine monophosphate cyclohydrolase. The known structures in this family show a common phosphate binding site.
Probab=20.83 E-value=1.3e+02 Score=23.75 Aligned_cols=9 Identities=22% Similarity=0.567 Sum_probs=4.3
Q ss_pred hhHHHHHHH
Q 024936 240 NGLRSIIRD 248 (260)
Q Consensus 240 e~T~~WL~e 248 (260)
+.|.+||++
T Consensus 32 ~gTa~~L~~ 40 (112)
T cd00532 32 GGTSRVLAD 40 (112)
T ss_pred cHHHHHHHH
Confidence 444455444
Done!