Query 024937
Match_columns 260
No_of_seqs 186 out of 637
Neff 6.4
Searched_HMMs 46136
Date Fri Mar 29 08:37:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024937.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024937hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1582 UDP-galactose transpor 100.0 4.4E-54 9.4E-59 383.5 7.4 248 3-260 21-298 (367)
2 KOG1580 UDP-galactose transpor 100.0 3.3E-52 7.1E-57 365.6 9.4 239 16-259 6-278 (337)
3 KOG1581 UDP-galactose transpor 100.0 7.9E-51 1.7E-55 367.1 13.7 239 18-259 9-278 (327)
4 KOG1583 UDP-N-acetylglucosamin 100.0 1.4E-46 2.9E-51 335.9 5.1 200 24-236 4-221 (330)
5 PF08449 UAA: UAA transporter 100.0 1.5E-45 3.2E-50 337.7 11.0 226 24-259 1-262 (303)
6 TIGR00803 nst UDP-galactose tr 99.5 2.6E-15 5.6E-20 131.6 2.3 139 107-260 2-190 (222)
7 KOG1443 Predicted integral mem 99.5 6.6E-14 1.4E-18 127.7 10.0 173 27-210 20-202 (349)
8 TIGR00817 tpt Tpt phosphate/ph 99.4 9.2E-12 2E-16 113.7 17.2 163 23-193 2-169 (302)
9 PTZ00343 triose or hexose phos 99.4 5.4E-11 1.2E-15 111.7 18.8 166 21-194 47-219 (350)
10 KOG1441 Glucose-6-phosphate/ph 99.3 5E-12 1.1E-16 117.3 8.5 168 20-193 14-187 (316)
11 KOG1444 Nucleotide-sugar trans 99.1 2E-09 4.3E-14 99.1 13.8 177 33-222 22-203 (314)
12 PF04142 Nuc_sug_transp: Nucle 99.0 1.3E-09 2.8E-14 98.0 9.1 111 83-195 17-140 (244)
13 PF06027 DUF914: Eukaryotic pr 99.0 1.7E-08 3.6E-13 94.7 15.2 115 79-195 75-194 (334)
14 COG5070 VRG4 Nucleotide-sugar 98.5 4.5E-07 9.9E-12 80.4 9.0 173 40-222 23-201 (309)
15 TIGR00950 2A78 Carboxylate/Ami 97.9 0.00025 5.5E-09 62.6 12.6 133 54-193 18-152 (260)
16 PF13536 EmrE: Multidrug resis 97.7 9E-05 1.9E-09 58.4 5.8 79 81-162 32-111 (113)
17 COG0697 RhaT Permeases of the 97.6 0.0035 7.6E-08 55.3 15.0 101 89-192 76-177 (292)
18 KOG2234 Predicted UDP-galactos 97.6 0.00038 8.3E-09 65.4 9.0 110 83-194 92-208 (345)
19 PF00892 EamA: EamA-like trans 97.4 0.00044 9.6E-09 53.4 5.8 115 36-156 4-125 (126)
20 PRK11453 O-acetylserine/cystei 97.2 0.011 2.4E-07 54.0 14.3 134 54-193 32-167 (299)
21 PLN00411 nodulin MtN21 family 97.2 0.029 6.3E-07 53.2 16.7 108 86-195 81-215 (358)
22 PRK11689 aromatic amino acid e 97.1 0.024 5.2E-07 51.8 14.8 138 54-193 32-180 (295)
23 KOG1442 GDP-fucose transporter 97.0 0.00031 6.7E-09 64.3 2.1 151 37-192 42-208 (347)
24 PRK11272 putative DMT superfam 97.0 0.033 7.2E-07 50.7 15.2 133 54-192 36-173 (292)
25 PRK15430 putative chlorampheni 96.8 0.029 6.2E-07 51.2 13.0 92 90-191 80-171 (296)
26 KOG2765 Predicted membrane pro 96.6 0.0044 9.5E-08 58.9 6.4 98 91-190 167-268 (416)
27 PF03151 TPT: Triose-phosphate 96.6 0.031 6.8E-07 45.3 10.3 68 88-157 86-153 (153)
28 TIGR03340 phn_DUF6 phosphonate 96.5 0.067 1.5E-06 48.3 13.1 96 90-190 70-165 (281)
29 TIGR00688 rarD rarD protein. T 96.1 0.024 5.3E-07 50.3 7.9 97 87-193 74-170 (256)
30 PRK10532 threonine and homoser 95.8 0.53 1.1E-05 42.9 15.3 166 15-193 5-172 (293)
31 KOG3912 Predicted integral mem 95.6 0.092 2E-06 48.6 9.2 110 82-193 83-200 (372)
32 TIGR00950 2A78 Carboxylate/Ami 95.0 0.26 5.7E-06 43.3 10.2 58 93-152 202-259 (260)
33 PRK15051 4-amino-4-deoxy-L-ara 94.9 0.058 1.3E-06 42.7 5.3 64 91-156 45-108 (111)
34 TIGR00817 tpt Tpt phosphate/ph 94.8 0.56 1.2E-05 42.7 12.2 65 96-162 234-298 (302)
35 PF08449 UAA: UAA transporter 94.0 0.44 9.4E-06 43.7 9.6 71 90-162 232-302 (303)
36 PLN00411 nodulin MtN21 family 93.6 0.87 1.9E-05 43.2 11.1 66 94-161 267-332 (358)
37 TIGR00776 RhaT RhaT L-rhamnose 93.1 1.4 3.1E-05 40.2 11.4 99 91-191 67-174 (290)
38 PRK10452 multidrug efflux syst 92.6 0.34 7.4E-06 39.2 5.7 74 85-160 32-106 (120)
39 PRK02971 4-amino-4-deoxy-L-ara 92.6 0.42 9.2E-06 38.9 6.4 69 90-160 55-125 (129)
40 PRK11272 putative DMT superfam 90.9 2 4.4E-05 38.9 9.7 65 93-159 223-287 (292)
41 KOG2766 Predicted membrane pro 89.2 0.0028 6.1E-08 57.7 -10.2 84 75-160 70-153 (336)
42 PRK09541 emrE multidrug efflux 89.2 1.4 3E-05 35.0 6.2 71 88-160 35-106 (110)
43 PRK11689 aromatic amino acid e 88.7 3.7 8.1E-05 37.3 9.6 66 92-159 224-289 (295)
44 PTZ00343 triose or hexose phos 88.7 8.2 0.00018 36.2 12.1 65 91-157 284-348 (350)
45 PRK10532 threonine and homoser 87.8 5.7 0.00012 36.0 10.2 67 93-161 219-285 (293)
46 PRK11453 O-acetylserine/cystei 85.2 11 0.00025 34.1 10.7 65 94-160 226-290 (299)
47 PRK15430 putative chlorampheni 84.9 16 0.00035 33.2 11.6 66 90-157 220-285 (296)
48 COG2076 EmrE Membrane transpor 83.7 8.4 0.00018 30.6 7.9 72 86-159 33-105 (106)
49 PRK11431 multidrug efflux syst 82.9 4.1 8.9E-05 32.1 5.9 70 87-158 33-103 (105)
50 COG0697 RhaT Permeases of the 82.3 21 0.00045 31.1 10.9 62 95-158 227-288 (292)
51 PF05653 Mg_trans_NIPA: Magnes 81.2 2 4.4E-05 39.8 4.2 70 91-162 58-127 (300)
52 KOG4314 Predicted carbohydrate 80.0 2.7 5.8E-05 37.4 4.2 95 95-193 65-159 (290)
53 PF03151 TPT: Triose-phosphate 78.8 4.6 9.9E-05 32.4 5.1 48 170-219 1-48 (153)
54 PRK10650 multidrug efflux syst 78.2 6.8 0.00015 31.1 5.7 68 86-155 38-106 (109)
55 TIGR00803 nst UDP-galactose tr 77.5 8.5 0.00018 33.3 6.7 70 82-154 152-221 (222)
56 COG2510 Predicted membrane pro 73.6 13 0.00028 30.8 6.2 70 86-157 69-139 (140)
57 TIGR03340 phn_DUF6 phosphonate 72.6 2.4 5.3E-05 38.1 2.1 60 93-154 221-280 (281)
58 PF06027 DUF914: Eukaryotic pr 68.5 18 0.00039 34.2 7.0 39 122-162 272-310 (334)
59 COG2962 RarD Predicted permeas 68.4 67 0.0014 29.9 10.4 72 86-159 214-285 (293)
60 PF10639 UPF0546: Uncharacteri 62.5 6.2 0.00014 31.6 2.3 68 86-155 44-112 (113)
61 KOG4510 Permease of the drug/m 60.6 2 4.3E-05 39.8 -1.0 73 82-156 95-168 (346)
62 TIGR00776 RhaT RhaT L-rhamnose 58.9 80 0.0017 28.7 9.3 68 89-158 217-289 (290)
63 KOG1441 Glucose-6-phosphate/ph 57.8 1.7E+02 0.0036 27.6 11.7 147 10-161 147-311 (316)
64 PF06800 Sugar_transport: Suga 57.7 87 0.0019 28.8 9.2 100 88-189 50-158 (269)
65 COG2962 RarD Predicted permeas 50.5 7.4 0.00016 36.1 1.0 38 120-159 109-146 (293)
66 PF00893 Multi_Drug_Res: Small 45.4 23 0.0005 26.8 2.9 58 89-148 35-93 (93)
67 PF14150 YesK: YesK-like prote 43.9 57 0.0012 24.6 4.7 58 133-193 19-81 (81)
68 PF04142 Nuc_sug_transp: Nucle 37.2 1.6E+02 0.0034 26.3 7.4 53 89-143 187-239 (244)
69 KOG1582 UDP-galactose transpor 36.1 1.3E+02 0.0028 28.3 6.6 51 110-162 287-337 (367)
70 PF15345 TMEM51: Transmembrane 32.7 71 0.0015 28.8 4.3 16 143-158 12-27 (233)
71 PF10028 DUF2270: Predicted in 29.2 2.6E+02 0.0055 24.4 7.0 64 147-210 27-103 (185)
72 KOG2234 Predicted UDP-galactos 28.8 4.5E+02 0.0096 25.2 9.1 65 89-155 256-320 (345)
73 PF13721 SecD-TM1: SecD export 27.7 47 0.001 25.8 2.1 24 135-158 2-25 (101)
74 KOG3733 Mucolipidin and relate 27.7 40 0.00087 33.2 2.0 47 17-66 410-456 (566)
75 COG5062 Uncharacterized membra 26.6 31 0.00066 33.2 1.0 69 133-206 137-210 (429)
76 KOG0411 Uncharacterized membra 25.0 69 0.0015 31.2 3.1 74 133-206 123-203 (405)
77 KOG1766 Enhancer of rudimentar 20.1 1.1E+02 0.0023 24.0 2.7 28 176-203 25-52 (104)
No 1
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.4e-54 Score=383.45 Aligned_cols=248 Identities=44% Similarity=0.784 Sum_probs=225.3
Q ss_pred ccccc--eeEEeeecCCCchhHHHHHHHHHHHHHHhHHHHHhhhhhccCCCC-cchHHHHHHHHHHHHHHH--HHhccCC
Q 024937 3 HEEQA--RSLFGVSLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFS-YGWYFTFVQGFVYLVLIY--LQGFTTK 77 (260)
Q Consensus 3 ~~~~~--~~~~g~~~~~~~~~~~l~~~~~gIf~~~~~~g~~qE~i~~~~~~~-~~~~ltf~qfl~~~~~~~--~~~~~~~ 77 (260)
+||+. ++++|+++++.|+|.|+++|.+|+|.+|+.||++||.|++.+.|+ +||.+|++|+++++-+.+ .+.++.+
T Consensus 21 s~e~p~ki~llg~~ls~kpkw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~~~~k 100 (367)
T KOG1582|consen 21 SEEQPSKIKLLGFNLSDKPKWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQLIQTK 100 (367)
T ss_pred cccCCcceeEEeeccccCchhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEeeccc
Confidence 34444 779999999999999999999999999999999999999999998 899999999999876544 5677889
Q ss_pred CCCCchHHHHHHHHHHHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcc
Q 024937 78 QMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTM 157 (260)
Q Consensus 78 ~~~~P~~~y~~~s~~~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~ 157 (260)
++.+|+|.|.+++.+..+++.++|.|+.|+|||+|++|||||++|||++|.+++| |||++.||.++.++++|+++|++
T Consensus 101 ~r~iP~rtY~~la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqG--kRY~v~d~~aA~lm~lGli~FTL 178 (367)
T KOG1582|consen 101 RRVIPWRTYVILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQG--KRYGVHDYIAAMLMSLGLIWFTL 178 (367)
T ss_pred ceecchhHhhhhHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeecc--ccccHHHHHHHHHHHHHHHhhhh
Confidence 9999999999999999999999999999999999999999999999999999987 99999999999999999999999
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCccccccChHHHHhhhhhcccccHHHHH-------------
Q 024937 158 ADAQTSPNFSLIGVLMISGALVMDSFLGNLQEVIFTVNPDTTQVIKHPLQLAYEYKNNLSQKCIFFL------------- 224 (260)
Q Consensus 158 ~~~~~~~~~~~~G~~ll~~sL~~dg~~~~~qe~l~~~~~~~~~~~~~~~e~lf~y~h~lslp~i~~f------------- 224 (260)
+|++.+||++..|+.++..||++||+.|+.||+.++.+ +-..+|.+| |+.-..+|+++..
T Consensus 179 ADs~~sPNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~------~~ss~Emvf-ySy~iG~vflf~~mvlTge~f~a~~f 251 (367)
T KOG1582|consen 179 ADSQTSPNFNLIGVMMISGALLADAVIGNVQEKAMKMN------PASSSEMVF-YSYGIGFVFLFAPMVLTGELFSAWTF 251 (367)
T ss_pred cccccCCCcceeeHHHHHHHHHHHHHhhHHHHHHHhhC------CCCcceEEE-eeecccHHHHHHHHHhcccchhhhHH
Confidence 99999999999999999999999999999999999944 334478899 8998899887621
Q ss_pred ----------HHHHHHHHhhcCCeEEEEEe--ecCceeEEEeeccccC
Q 024937 225 ----------LLLISNISLTDGDAVLLYSS--WFAFFTCTDDSNRRAC 260 (260)
Q Consensus 225 ----------~~l~~~i~~~~GQ~~fif~t--~Fg~lt~~tvt~tr~~ 260 (260)
-.+..+..+-+|| +|+-.- -||+++.+||||-||+
T Consensus 252 caehp~~tyGy~~~~s~~gylG~-~~VLalI~~fGA~~aatvTTaRKa 298 (367)
T KOG1582|consen 252 CAEHPVRTYGYAFLFSLAGYLGI-VFVLALIKLFGALIAATVTTARKA 298 (367)
T ss_pred HHhCcHhHHHHHHHHHHHhHhhH-HHHHHHHHHhchhHHHHHHHhHhH
Confidence 2466778888999 777655 9999999999999984
No 2
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.3e-52 Score=365.60 Aligned_cols=239 Identities=25% Similarity=0.375 Sum_probs=197.2
Q ss_pred CCCchhHHHHHHHHHHHHHHhHHHHHhhhhhccCCCC----cchHHHHHHHHHHHHH------HH--HH-hccCCCCCCc
Q 024937 16 SDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFS----YGWYFTFVQGFVYLVL------IY--LQ-GFTTKQMVNP 82 (260)
Q Consensus 16 ~~~~~~~~l~~~~~gIf~~~~~~g~~qE~i~~~~~~~----~~~~ltf~qfl~~~~~------~~--~~-~~~~~~~~~P 82 (260)
+-+|++.++++|++|||.||..||+.||||.+ .+++ .++.+||++.+++..+ +- .. ....+.++.|
T Consensus 6 s~lper~rf~ica~GifvCYF~yGI~QEkitr-GkYg~~g~~~E~FTfalaLVf~qC~~N~vfAkvl~~ir~~~~~D~t~ 84 (337)
T KOG1580|consen 6 SWLPERGRFLICAGGIFVCYFVYGIQQEKITR-GKYGLPGESIEKFTFALALVFFQCTANTVFAKVLFLIRKKTEIDNTP 84 (337)
T ss_pred cccccccceeEEecchhheehhhhhHHHHhhc-cccCCCCcchheehHHHHHHHHHHHHHHHHHHhheeecccccccCCc
Confidence 45788899999999999999999999999984 3332 2455666666555443 21 11 1224567899
Q ss_pred hHHHHHHHHHHHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCCCC
Q 024937 83 WKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQT 162 (260)
Q Consensus 83 ~~~y~~~s~~~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~ 162 (260)
.+.|+.++++|.++|+.+|.|++|+|||||++.|||||||||++|+++ .+|+|+|+||.+|++|.+||++|++.+.+.
T Consensus 85 ~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~--~~KsY~w~kY~cVL~IV~GValFmYK~~Kv 162 (337)
T KOG1580|consen 85 TKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLF--AHKSYHWRKYCCVLMIVVGVALFMYKENKV 162 (337)
T ss_pred chHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhh--hcccccHHHHHHHHHHHHHHHHhhcccccc
Confidence 999999999999999999999999999999999999999999999999 799999999999999999999999987665
Q ss_pred CC---ChhHHHHHHHHHHHHHHHhHHHHHHHHHhc-CCCccccccChH--HHHhh-------------hhhcccccHHHH
Q 024937 163 SP---NFSLIGVLMISGALVMDSFLGNLQEVIFTV-NPDTTQVIKHPL--QLAYE-------------YKNNLSQKCIFF 223 (260)
Q Consensus 163 ~~---~~~~~G~~ll~~sL~~dg~~~~~qe~l~~~-~~~~~~~~~~~~--e~lf~-------------y~h~lslp~i~~ 223 (260)
.+ +...+|-+|+++||.+||++|..|||+.+. ++++.+||.+.| .++.. ....---|++ +
T Consensus 163 ~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~-~ 241 (337)
T KOG1580|consen 163 GGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYV-F 241 (337)
T ss_pred CCCcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHH-H
Confidence 32 356789999999999999999999999975 778888888754 11110 1111123433 7
Q ss_pred HHHHHHHHHhhcCCeEEEEEe--ecCceeEEEeecccc
Q 024937 224 LLLLISNISLTDGDAVLLYSS--WFAFFTCTDDSNRRA 259 (260)
Q Consensus 224 f~~l~~~i~~~~GQ~~fif~t--~Fg~lt~~tvt~tr~ 259 (260)
.++...++++++|| .|||.| +||||||++||||||
T Consensus 242 ~~l~l~ai~s~LGQ-~fIF~tv~~FgPLtCSivTTTRK 278 (337)
T KOG1580|consen 242 WDLTLLAIASCLGQ-WFIFKTVEEFGPLTCSIVTTTRK 278 (337)
T ss_pred HHHHHHHHHHHhhh-HHHHHHHHHhCCeeEEEEeehHH
Confidence 88999999999999 999999 999999999999998
No 3
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.9e-51 Score=367.12 Aligned_cols=239 Identities=24% Similarity=0.390 Sum_probs=199.8
Q ss_pred CchhHHHHHHHHHHHHHHhHHHHHhhhhhcc------CCCCcchHHHHHHHHHHHHHHH--HHhc-cCCCCCCchHHHHH
Q 024937 18 RPRWQQFLICSSGFFFGYLVNGICEEYVYNR------LQFSYGWYFTFVQGFVYLVLIY--LQGF-TTKQMVNPWKTYVK 88 (260)
Q Consensus 18 ~~~~~~l~~~~~gIf~~~~~~g~~qE~i~~~------~~~~~~~~ltf~qfl~~~~~~~--~~~~-~~~~~~~P~~~y~~ 88 (260)
..+..++++|++||++.|++||++||+|+++ ++|++..++.|+|.++..++.+ +.++ ...+.+.|+++|..
T Consensus 9 ~~~~~~L~~c~~GI~~t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~~~k~~~~~~apl~~y~~ 88 (327)
T KOG1581|consen 9 ANKIILLVFCFSGIYATFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLKWWKKELSGVAPLYKYSL 88 (327)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHhcccccCCCCCchhHHhH
Confidence 3456789999999999999999999999863 5688999999999998777654 3332 33567899999999
Q ss_pred HHHHHHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCCCCCC----
Q 024937 89 LSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSP---- 164 (260)
Q Consensus 89 ~s~~~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~~~---- 164 (260)
.++++..+.+|+++||||||||+|+++||||+||||++|.++ +|+||+..||+++++|++|+.+|++.++++++
T Consensus 89 is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lv--y~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g 166 (327)
T KOG1581|consen 89 ISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLV--YGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSG 166 (327)
T ss_pred HHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHH--hcCccCcHHHHHHHHHHhheeeEEEecCCCCccccC
Confidence 999999999999999999999999999999999999999999 78999999999999999999999998765432
Q ss_pred -ChhHHHHHHHHHHHHHHHhHHHHHHHHHhc-CCCccccccChHH--HHhhhhhcc-------ccc-----HHHHHHHHH
Q 024937 165 -NFSLIGVLMISGALVMDSFLGNLQEVIFTV-NPDTTQVIKHPLQ--LAYEYKNNL-------SQK-----CIFFLLLLI 228 (260)
Q Consensus 165 -~~~~~G~~ll~~sL~~dg~~~~~qe~l~~~-~~~~~~~~~~~~e--~lf~y~h~l-------slp-----~i~~f~~l~ 228 (260)
++.+.|+.|+..+|++||+++++||+++++ +.++.++|...|- +++.....+ ++. +-+.+|++.
T Consensus 167 ~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l 246 (327)
T KOG1581|consen 167 RENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILL 246 (327)
T ss_pred CCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHH
Confidence 367899999999999999999999999984 3345555554331 111111011 111 122689999
Q ss_pred HHHHhhcCCeEEEEEe--ecCceeEEEeecccc
Q 024937 229 SNISLTDGDAVLLYSS--WFAFFTCTDDSNRRA 259 (260)
Q Consensus 229 ~~i~~~~GQ~~fif~t--~Fg~lt~~tvt~tr~ 259 (260)
.+.|++.|| .|||+| +|||+|.+|||||||
T Consensus 247 ~s~~gavGQ-~FI~~TI~~FGslt~t~I~ttRk 278 (327)
T KOG1581|consen 247 YSTCGAVGQ-LFIFYTIERFGSLTFTTIMTTRK 278 (327)
T ss_pred HHHhhhhhh-heehhhHhhcccHHHHHHHHHHH
Confidence 999999999 999999 999999999999998
No 4
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.4e-46 Score=335.85 Aligned_cols=200 Identities=25% Similarity=0.357 Sum_probs=180.4
Q ss_pred HHHHHHHHHHHHhHHHHHhhhhhccCCCCcchHHHHHHHHHHHHH--HHHHhccCCCCCCchHHHHHHHHHHHHHHHHhH
Q 024937 24 FLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFVQGFVYLVL--IYLQGFTTKQMVNPWKTYVKLSAVLMGSHGLTK 101 (260)
Q Consensus 24 l~~~~~gIf~~~~~~g~~qE~i~~~~~~~~~~~ltf~qfl~~~~~--~~~~~~~~~~~~~P~~~y~~~s~~~~~~~~~~N 101 (260)
-+..++++|+|||+|++..|.+. +.+++.++++||+||++.+.. ++...+...++++|+|.|++++.+|+.++++||
T Consensus 4 a~~ai~~vf~GCcsnvv~lE~L~-~~~pgsgNLITFaqFlFia~eGlif~skf~~~k~kiplk~Y~i~V~mFF~vnv~NN 82 (330)
T KOG1583|consen 4 AAAAISLVFGGCCSNVVFLELLV-RNEPGSGNLITFAQFLFIATEGLIFTSKFFTVKPKIPLKDYAITVAMFFIVNVTNN 82 (330)
T ss_pred HHHHHHHHHHhhhchHHHHHHHH-HhCCCCeeehHHHHHHHHHHhceeeeccccccCCCCchhhhheehheeeeeeeecc
Confidence 35678999999999999999998 778999999999999876653 334556667899999999999999999999999
Q ss_pred HHhhc-cCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCCCCC---------C----C--
Q 024937 102 GSLAF-LNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTS---------P----N-- 165 (260)
Q Consensus 102 ~AL~y-Is~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~~---------~----~-- 165 (260)
.||+| |++|+|+++||++++.+|++|+++ .+|||+.+||.+|+++|+|++++++.++++- . +
T Consensus 83 ~al~f~I~~PlHiIfRsgsll~nM~~g~il--~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~ 160 (330)
T KOG1583|consen 83 YALKFNIPMPLHIIFRSGSLLANMILGWIL--LGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFF 160 (330)
T ss_pred ceeeecccceEEEEEecCcHHHHHHHHHHh--ccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccch
Confidence 99999 999999999999999999999999 6799999999999999999999999876431 1 1
Q ss_pred hhHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCccccccChHHHHhhhhhcccccHHHHHHHHHHHHHhhcC
Q 024937 166 FSLIGVLMISGALVMDSFLGNLQEVIFTVNPDTTQVIKHPLQLAYEYKNNLSQKCIFFLLLLISNISLTDG 236 (260)
Q Consensus 166 ~~~~G~~ll~~sL~~dg~~~~~qe~l~~~~~~~~~~~~~~~e~lf~y~h~lslp~i~~f~~l~~~i~~~~G 236 (260)
.|.+|+.+|..|+++++.+|.+||++|+ +||+||+|++| |+|++||| +|+++..||.++..
T Consensus 161 ~w~iGi~lL~~al~~sa~mgiyqE~~Y~------kyGKh~~EalF-ytH~LsLP---~Flf~~~div~~~~ 221 (330)
T KOG1583|consen 161 WWLIGIALLVFALLLSAYMGIYQETTYQ------KYGKHWKEALF-YTHFLSLP---LFLFMGDDIVSHWR 221 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH------HhcCChHHHHH-HHHHhccc---hHHHhcchHHHHHH
Confidence 3678999999999999999999999999 89999999999 99999999 99998888887744
No 5
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=100.00 E-value=1.5e-45 Score=337.71 Aligned_cols=226 Identities=31% Similarity=0.555 Sum_probs=200.5
Q ss_pred HHHHHHHHHHHHhHHHHHhhhhhccCCCC-cchHHHHHHHHHHHHHHHH--Hhc-cCCCCCCchHHHHHHHHHHHHHHHH
Q 024937 24 FLICSSGFFFGYLVNGICEEYVYNRLQFS-YGWYFTFVQGFVYLVLIYL--QGF-TTKQMVNPWKTYVKLSAVLMGSHGL 99 (260)
Q Consensus 24 l~~~~~gIf~~~~~~g~~qE~i~~~~~~~-~~~~ltf~qfl~~~~~~~~--~~~-~~~~~~~P~~~y~~~s~~~~~~~~~ 99 (260)
+++|++|||++||+||++||+|++++... +++++|++|++++.+..+. ... ++++++.|+++|+..+.+++.++++
T Consensus 1 ~~~~~~~i~~~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (303)
T PF08449_consen 1 FLICVAGIFGGCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPKSRKIPLKKYAILSFLFFLASVL 80 (303)
T ss_pred CEeeHHHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccCCCcChHHHHHHHHHHHHHHHHH
Confidence 35799999999999999999999766666 7999999999987775542 222 3577899999999999999999999
Q ss_pred hHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCCCCCCC------hhHHHHHH
Q 024937 100 TKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPN------FSLIGVLM 173 (260)
Q Consensus 100 ~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~~~~------~~~~G~~l 173 (260)
+|+||+|+|||+|+++||||++|||++|+++ +||||+.+||++++++++|+++++++|.+++++ .+..|+++
T Consensus 81 ~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~--~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~l 158 (303)
T PF08449_consen 81 SNAALKYISYPTQIVFKSSKPIPVMILGVLI--LGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIIL 158 (303)
T ss_pred HHHHHHhCChHHHHHHhhhHHHHHHHHHHHh--cCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHH
Confidence 9999999999999999999999999999999 789999999999999999999999998754332 23459999
Q ss_pred HHHHHHHHHhHHHHHHHHHhcCCCccccccChHHHHhhhhhcccccHHH------------------------HHHHHHH
Q 024937 174 ISGALVMDSFLGNLQEVIFTVNPDTTQVIKHPLQLAYEYKNNLSQKCIF------------------------FLLLLIS 229 (260)
Q Consensus 174 l~~sL~~dg~~~~~qe~l~~~~~~~~~~~~~~~e~lf~y~h~lslp~i~------------------------~f~~l~~ 229 (260)
++.|+++||+++++|||+++ +++.++.|.+| |+|+.++|+.. ..+++..
T Consensus 159 l~~sl~~~a~~~~~qe~~~~------~~~~~~~~~mf-y~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~ 231 (303)
T PF08449_consen 159 LLLSLLLDAFTGVYQEKLFK------KYGKSPWELMF-YTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLF 231 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHH------HhCCcHHHHHH-HHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHH
Confidence 99999999999999999999 78999999999 89999888533 1335778
Q ss_pred HHHhhcCCeEEEEEe--ecCceeEEEeecccc
Q 024937 230 NISLTDGDAVLLYSS--WFAFFTCTDDSNRRA 259 (260)
Q Consensus 230 ~i~~~~GQ~~fif~t--~Fg~lt~~tvt~tr~ 259 (260)
++++++|| .++|.+ +|||+++++|+|+||
T Consensus 232 s~~~~~g~-~~i~~~~~~~~al~~t~v~t~Rk 262 (303)
T PF08449_consen 232 SLTGALGQ-FFIFYLIKKFSALTTTIVTTLRK 262 (303)
T ss_pred HHHHHHHH-HHHHHHHHhcCchhhhhHHHHHH
Confidence 89999999 999998 999999999999998
No 6
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=99.53 E-value=2.6e-15 Score=131.60 Aligned_cols=139 Identities=15% Similarity=0.214 Sum_probs=110.4
Q ss_pred cCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCCCC----------------C-------
Q 024937 107 LNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQT----------------S------- 163 (260)
Q Consensus 107 Is~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~----------------~------- 163 (260)
+++|.|+++||++++|+|+.|+.+ .+|||+..||+++++++.|+....++|.+. +
T Consensus 2 isvPa~~~~~s~~l~~v~l~~~~~--~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~ 79 (222)
T TIGR00803 2 LSVPIHIIFKQNNLVLIALGNLLA--AGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLM 79 (222)
T ss_pred ccccchHHHHhcchHHHHHhcccc--cceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccc
Confidence 689999999999999999999999 679999999999999999999877765421 0
Q ss_pred CChhHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCccccccChHHHHhhhhhcccccHHHH--------------------
Q 024937 164 PNFSLIGVLMISGALVMDSFLGNLQEVIFTVNPDTTQVIKHPLQLAYEYKNNLSQKCIFF-------------------- 223 (260)
Q Consensus 164 ~~~~~~G~~ll~~sL~~dg~~~~~qe~l~~~~~~~~~~~~~~~e~lf~y~h~lslp~i~~-------------------- 223 (260)
.+....|+.+++.++++||+.+.+||+.+|++ |.++ |.|..++|....
T Consensus 80 ~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~-----------~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (222)
T TIGR00803 80 FGNPVVGLSAVLSALLSSGFAGVYFEKILKDG-----------DTMF-WSRNLQLPLFGLFSTFSVLLWSDGTLISNFGF 147 (222)
T ss_pred cccHHHHHHHHHHHHHHHhhhHHHHHHcccCC-----------CCch-HHHHHHHHHHHHHHHHHHHhhcccchhhccCc
Confidence 12457899999999999999999999987632 3335 566665552210
Q ss_pred -----HHHHHHHHHhhcCCeEEEEEe--ecCceeEEEeeccccC
Q 024937 224 -----LLLLISNISLTDGDAVLLYSS--WFAFFTCTDDSNRRAC 260 (260)
Q Consensus 224 -----f~~l~~~i~~~~GQ~~fif~t--~Fg~lt~~tvt~tr~~ 260 (260)
......-+.++.|| .+|..+ ++|+.+++.++++||.
T Consensus 148 ~~~~~~~~~~~~~~~a~~~-~~v~~vlk~~~~~~~~~~~~~~~~ 190 (222)
T TIGR00803 148 FIGYPTAVWIVGLLNVGGG-LCIGGVVRYADNTTKSFVTALSII 190 (222)
T ss_pred ccCCchHHHHHHHHHHhcC-ceeeehhHHhHHHHHHHHHHHHHH
Confidence 01233447788999 899999 9999999999999973
No 7
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.51 E-value=6.6e-14 Score=127.74 Aligned_cols=173 Identities=17% Similarity=0.322 Sum_probs=137.2
Q ss_pred HHHHHHHHHhHHHHHhhhhhccCCCCcchHHHHHHHHHHHHHHH----HHh--ccCCCCCCchHHHH----HHHHHHHHH
Q 024937 27 CSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFVQGFVYLVLIY----LQG--FTTKQMVNPWKTYV----KLSAVLMGS 96 (260)
Q Consensus 27 ~~~gIf~~~~~~g~~qE~i~~~~~~~~~~~ltf~qfl~~~~~~~----~~~--~~~~~~~~P~~~y~----~~s~~~~~~ 96 (260)
.+.+.|..-+.--++|.+.. .++++|.+++-.|-++--+++. +.. ..+++.+..|+.|+ ++++...+.
T Consensus 20 lVl~yY~~Si~Ltf~~~~~~--~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalata~D 97 (349)
T KOG1443|consen 20 LVLLYYFLSIGLTFYFKWLT--KNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALATALD 97 (349)
T ss_pred HHHHHHHHHHHHHHHhhhhh--cCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhhhcc
Confidence 34666666666677777764 3589999998777654323221 211 12234466677777 899999999
Q ss_pred HHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCCCCCCChhHHHHHHHHH
Q 024937 97 HGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISG 176 (260)
Q Consensus 97 ~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~~~~~~~~G~~ll~~ 176 (260)
..++|++|+||++..+++.||+.++.+.++|.++ .-+|.++.-.+.+.+|.+|+++|++.+. +++..|+.++..
T Consensus 98 IGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if--~lEk~~w~L~l~v~lI~~Glflft~KsT----qf~i~Gf~lv~~ 171 (349)
T KOG1443|consen 98 IGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIF--KLEKFRWALVLIVLLIAVGLFLFTYKST----QFNIEGFFLVLA 171 (349)
T ss_pred cccccceeeeeeeeeeeeccccHHHHHHHHHHHH--HhHHHHHHHHHHHHHHhhheeEEEeccc----ceeehhHHHHHH
Confidence 9999999999999999999999999999999999 5799999999999999999999999764 578899999999
Q ss_pred HHHHHHhHHHHHHHHHhcCCCccccccChHHHHh
Q 024937 177 ALVMDSFLGNLQEVIFTVNPDTTQVIKHPLQLAY 210 (260)
Q Consensus 177 sL~~dg~~~~~qe~l~~~~~~~~~~~~~~~e~lf 210 (260)
|.+++|+++.+.+.+.+++|.. ..||...++
T Consensus 172 aS~~sGlRW~~tQ~ll~~~~~~---~~~P~~ti~ 202 (349)
T KOG1443|consen 172 ASLLSGLRWAFTQMLLRNQPSA---KRNPIDTIF 202 (349)
T ss_pred HHHhhhhhHHHHHHHHhcCccc---cCCCeeeHH
Confidence 9999999999999999976521 234555555
No 8
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.42 E-value=9.2e-12 Score=113.68 Aligned_cols=163 Identities=17% Similarity=0.167 Sum_probs=130.2
Q ss_pred HHHHHHHHHHHHHhHHHHHhhhhhccCCCCcchHHHHHHHHHHHHHHHH--HhccCCCCCC---chHHHHHHHHHHHHHH
Q 024937 23 QFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFVQGFVYLVLIYL--QGFTTKQMVN---PWKTYVKLSAVLMGSH 97 (260)
Q Consensus 23 ~l~~~~~gIf~~~~~~g~~qE~i~~~~~~~~~~~ltf~qfl~~~~~~~~--~~~~~~~~~~---P~~~y~~~s~~~~~~~ 97 (260)
+....+...|.....+.+++..+.+ +++.+..+++.|+.+..+.... +....++++. .++..++.++++....
T Consensus 2 ~~~~~~~~w~~~~~~~~~~NK~~l~--~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 79 (302)
T TIGR00817 2 QTGLLFGLWYFLNVYFNIYNKKLLN--VFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGH 79 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh--hCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 4456677888888888999988873 4788999999998875543322 1111122222 3455667888888889
Q ss_pred HHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCCCCCCChhHHHHHHHHHH
Q 024937 98 GLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGA 177 (260)
Q Consensus 98 ~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~~~~~~~~G~~ll~~s 177 (260)
.++|.+++|+|.+...+.|+..|+.++++++++ +|||++.++++++++..+|+++....+ .+++..|..+.+.|
T Consensus 80 ~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~--~~e~~~~~~~~~l~l~~~Gv~l~~~~~----~~~~~~G~~~~l~a 153 (302)
T TIGR00817 80 VTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFF--LGQEFPSTLWLSLLPIVGGVALASDTE----LSFNWAGFLSAMIS 153 (302)
T ss_pred HHHHHHHHhccHHHHHHHHhcchHHHHHHHHHH--hCCCCcHHHHHHHHHHHHHHhhhcCCc----ccccHHHHHHHHHH
Confidence 999999999999999999999999999999999 789999999999999999998764322 23456799999999
Q ss_pred HHHHHhHHHHHHHHHh
Q 024937 178 LVMDSFLGNLQEVIFT 193 (260)
Q Consensus 178 L~~dg~~~~~qe~l~~ 193 (260)
.++-++...+.+|..+
T Consensus 154 ~~~~a~~~v~~k~~~~ 169 (302)
T TIGR00817 154 NITFVSRNIFSKKAMT 169 (302)
T ss_pred HHHHHHHHHHHHHhhc
Confidence 9999999999998776
No 9
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.36 E-value=5.4e-11 Score=111.70 Aligned_cols=166 Identities=11% Similarity=0.116 Sum_probs=135.2
Q ss_pred hHHHHHHHHHHHHHHhHHHHHhhhhhccCCCCcchHHHHHHHHHHHHHH--HHH-hccCCCCC----CchHHHHHHHHHH
Q 024937 21 WQQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFVQGFVYLVLI--YLQ-GFTTKQMV----NPWKTYVKLSAVL 93 (260)
Q Consensus 21 ~~~l~~~~~gIf~~~~~~g~~qE~i~~~~~~~~~~~ltf~qfl~~~~~~--~~~-~~~~~~~~----~P~~~y~~~s~~~ 93 (260)
..+.+..+..+|..-..+.+....+++ .+++|..++..|+++..++. .+. +.+++++. ..+++.+++++++
T Consensus 47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~--~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~ 124 (350)
T PTZ00343 47 KWKLALLFLTWYALNVLYVVDNKLALN--MLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCH 124 (350)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHH--hCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 467778888888888888888888873 36789999999998865432 222 22222221 2345567888888
Q ss_pred HHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCCCCCCChhHHHHHH
Q 024937 94 MGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLM 173 (260)
Q Consensus 94 ~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~~~~~~~~G~~l 173 (260)
......+|.|+++++.+...+.|++.|+.++++++++ ++||++++++++++++++|+++...++ .+++..|+++
T Consensus 125 ~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~--l~ek~s~~~~l~l~l~v~Gv~l~~~~~----~~~~~~G~~~ 198 (350)
T PTZ00343 125 LFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILF--LKQFLNLYAYLSLIPIVGGVALASVKE----LHFTWLAFWC 198 (350)
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHH--hCCCccHHHHHHHHHHHHHHHheeccc----chhHHHHHHH
Confidence 8777888999999999999999999999999999999 789999999999999999999988643 2456789999
Q ss_pred HHHHHHHHHhHHHHHHHHHhc
Q 024937 174 ISGALVMDSFLGNLQEVIFTV 194 (260)
Q Consensus 174 l~~sL~~dg~~~~~qe~l~~~ 194 (260)
.++|.++.++.+.+.+++.++
T Consensus 199 ~l~s~~~~a~~~i~~k~~~~~ 219 (350)
T PTZ00343 199 AMLSNLGSSLRSIFAKKTMKN 219 (350)
T ss_pred HHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999998874
No 10
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=99.31 E-value=5e-12 Score=117.30 Aligned_cols=168 Identities=17% Similarity=0.250 Sum_probs=142.2
Q ss_pred hhHHHHHHHHHHHHHHhHHHHHhhhhhccCCCCcchHHHHHHHHHHHHHHH-HHhcc-----CCCCCCchHHHHHHHHHH
Q 024937 20 RWQQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFVQGFVYLVLIY-LQGFT-----TKQMVNPWKTYVKLSAVL 93 (260)
Q Consensus 20 ~~~~l~~~~~gIf~~~~~~g~~qE~i~~~~~~~~~~~ltf~qfl~~~~~~~-~~~~~-----~~~~~~P~~~y~~~s~~~ 93 (260)
+.....++.+-.|.+-...-.+..+++++.+|+++..+|..++.+..+... .+..+ +.+++.|++.-+++++.+
T Consensus 14 ~~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~ 93 (316)
T KOG1441|consen 14 KILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVF 93 (316)
T ss_pred hhHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHH
Confidence 445566667777777777777888888666889999999988766554322 22111 123567899999999999
Q ss_pred HHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCCCCCCChhHHHHHH
Q 024937 94 MGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLM 173 (260)
Q Consensus 94 ~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~~~~~~~~G~~l 173 (260)
..+.+++|.|++|+++.+..+.|+..|+.+.++++++ .+|+|+...|++.+.++.||++++..| .+++..|+..
T Consensus 94 ~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~--~~~~~s~~~~lsL~piv~GV~ias~~e----~~fn~~G~i~ 167 (316)
T KOG1441|consen 94 CISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLL--LGKTYSSMTYLSLLPIVFGVAIASVTE----LSFNLFGFIS 167 (316)
T ss_pred HHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHH--hCCCCcceEEEEEEEeeeeEEEeeecc----ccccHHHHHH
Confidence 9999999999999999999999999999999999999 779999999999999999999999966 3688999999
Q ss_pred HHHHHHHHHhHHHHHHHHHh
Q 024937 174 ISGALVMDSFLGNLQEVIFT 193 (260)
Q Consensus 174 l~~sL~~dg~~~~~qe~l~~ 193 (260)
...+.+..+++.++++++.+
T Consensus 168 a~~s~~~~al~~I~~~~ll~ 187 (316)
T KOG1441|consen 168 AMISNLAFALRNILSKKLLT 187 (316)
T ss_pred HHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999996
No 11
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.09 E-value=2e-09 Score=99.14 Aligned_cols=177 Identities=15% Similarity=0.255 Sum_probs=136.0
Q ss_pred HHHhHHHHHhhhhhccCCCCcchHHHHHHHHHHHHHHH-HHhcc----CCCCCCchHHHHHHHHHHHHHHHHhHHHhhcc
Q 024937 33 FGYLVNGICEEYVYNRLQFSYGWYFTFVQGFVYLVLIY-LQGFT----TKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFL 107 (260)
Q Consensus 33 ~~~~~~g~~qE~i~~~~~~~~~~~ltf~qfl~~~~~~~-~~~~~----~~~~~~P~~~y~~~s~~~~~~~~~~N~AL~yI 107 (260)
.+-+.-.+....+.+.-+|+.+.++.+.|.+..++..+ ++..+ ++-+..-.|+|++.++.|.+....+-.+++|+
T Consensus 22 ~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~i~t~~~slk~l 101 (314)
T KOG1444|consen 22 LSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGMLFTGSKSLKYL 101 (314)
T ss_pred HHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHHHHHcccccccc
Confidence 34445556666666555666666666799887665433 22211 11123346779999999999999999999999
Q ss_pred CchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCCCCCCChhHHHHHHHHHHHHHHHhHHHH
Q 024937 108 NYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVMDSFLGNL 187 (260)
Q Consensus 108 s~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~~~~~~~~G~~ll~~sL~~dg~~~~~ 187 (260)
|+|+.+++|...++-+++....+ +++|.+..-+.++.++-+|.......|. +++..|+..+..+.+..+....+
T Consensus 102 nVpm~tv~kn~tii~~ai~E~lf--~~~~~~~~v~~Sv~~m~~~s~~~~~~d~----sf~~~gY~w~~~n~~~~a~~~v~ 175 (314)
T KOG1444|consen 102 NVPMFTVFKNLTIILTAIGEVLF--FGKRPSNKVWASVFAMIIGSVAAAFTDL----SFNLRGYSWALANCLTTAAFVVY 175 (314)
T ss_pred CchHHHHHhhchHHHHHHhHHhh--cCcCchhhHHHHHHHHHHHHHhhccccc----eecchhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999 7899999999999999999888877664 45677999999999999999988
Q ss_pred HHHHHhcCCCccccccChHHHHhhhhhcccccHHH
Q 024937 188 QEVIFTVNPDTTQVIKHPLQLAYEYKNNLSQKCIF 222 (260)
Q Consensus 188 qe~l~~~~~~~~~~~~~~~e~lf~y~h~lslp~i~ 222 (260)
-++..+.. +.+-.|.+| |++++++|...
T Consensus 176 ~kk~vd~~------~l~~~~lv~-yNnl~~L~~l~ 203 (314)
T KOG1444|consen 176 VKKSVDSA------NLNKFGLVF-YNNLLSLPPLL 203 (314)
T ss_pred HHHhhccc------cccceeEEe-ehhHHHHHHHH
Confidence 88777632 234456777 88888888443
No 12
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.01 E-value=1.3e-09 Score=97.98 Aligned_cols=111 Identities=20% Similarity=0.348 Sum_probs=100.3
Q ss_pred hHHHHHHHHHHHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCCCC
Q 024937 83 WKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQT 162 (260)
Q Consensus 83 ~~~y~~~s~~~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~ 162 (260)
..++++.+++|...+.+.+.+++|++-++..+.+.+|++.+-++++++ +|||.+.+||++.+++++|+++..+++...
T Consensus 17 ~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~--L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~ 94 (244)
T PF04142_consen 17 TLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLL--LKRRLSRRQWLALFLLVAGVVLVQLSSSQS 94 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHH--HHcccchhhHHHHHHHHHHHheeecCCccc
Confidence 466888999999999999999999999999999999999999999999 899999999999999999999998876543
Q ss_pred C-------------CChhHHHHHHHHHHHHHHHhHHHHHHHHHhcC
Q 024937 163 S-------------PNFSLIGVLMISGALVMDSFLGNLQEVIFTVN 195 (260)
Q Consensus 163 ~-------------~~~~~~G~~ll~~sL~~dg~~~~~qe~l~~~~ 195 (260)
. ......|+.+++.+.+++|+-|.+.|+++|++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~ 140 (244)
T PF04142_consen 95 SDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRS 140 (244)
T ss_pred cccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 1 01356899999999999999999999999954
No 13
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=98.97 E-value=1.7e-08 Score=94.67 Aligned_cols=115 Identities=17% Similarity=0.321 Sum_probs=105.6
Q ss_pred CCCchHHHHHHHHHHHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhccc
Q 024937 79 MVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMA 158 (260)
Q Consensus 79 ~~~P~~~y~~~s~~~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~ 158 (260)
.+.|+++|+.++++-+.++.+.+.|++|-|+...++..+...+.+|++++++ +|+||++.|++.+++..+|+++...+
T Consensus 75 ~~~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~f--L~~ry~~~~~~gv~i~i~Gv~lv~~s 152 (334)
T PF06027_consen 75 LKRPWWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIF--LKRRYSWFHILGVLICIAGVVLVVVS 152 (334)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHH--HHhhhhHHHHHHHHHHHhhhhheeee
Confidence 4689999999999999999999999999999999999999999999999999 89999999999999999999999998
Q ss_pred CCCCC-----CChhHHHHHHHHHHHHHHHhHHHHHHHHHhcC
Q 024937 159 DAQTS-----PNFSLIGVLMISGALVMDSFLGNLQEVIFTVN 195 (260)
Q Consensus 159 ~~~~~-----~~~~~~G~~ll~~sL~~dg~~~~~qe~l~~~~ 195 (260)
|..+. .++...|-++.+.+..+-|+.+++||++.++.
T Consensus 153 D~~~~~~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~ 194 (334)
T PF06027_consen 153 DVLSGSDSSSGSNPILGDLLALLGAILYAVSNVLEEKLVKKA 194 (334)
T ss_pred cccccccCCCCCccchhHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 85432 23568899999999999999999999999853
No 14
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=98.52 E-value=4.5e-07 Score=80.41 Aligned_cols=173 Identities=19% Similarity=0.262 Sum_probs=117.5
Q ss_pred HHhhhhhccCCCCcchHHHHHHHHHHHH-HHHHHhccC-CCCCCchHHHHHHHHHHHHHHHHhHHHhhccCchHHHHHhh
Q 024937 40 ICEEYVYNRLQFSYGWYFTFVQGFVYLV-LIYLQGFTT-KQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKS 117 (260)
Q Consensus 40 ~~qE~i~~~~~~~~~~~ltf~qfl~~~~-~~~~~~~~~-~~~~~P~~~y~~~s~~~~~~~~~~N~AL~yIs~P~~il~KS 117 (260)
...+.+.+.++|+-..++-+.|.++.++ +..++..+. +-|....++|.+.+++.......+..||+|+++|.+++||-
T Consensus 23 ltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR~t~aK~WfpiSfLLv~MIyt~SKsLqyL~vpiYTiFKN 102 (309)
T COG5070 23 LTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFRLTKAKKWFPISFLLVVMIYTSSKSLQYLAVPIYTIFKN 102 (309)
T ss_pred HhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhheehhhhhhhcCHHHHHHHHHHhcccceeeeeeeHHHHhcc
Confidence 4445555556677666778999987665 222322111 11234567899999999888889999999999999999999
Q ss_pred ccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCCCCCC---ChhHHHHHHHHHHHHHHHhH-HHHHHHHHh
Q 024937 118 TKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSP---NFSLIGVLMISGALVMDSFL-GNLQEVIFT 193 (260)
Q Consensus 118 ~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~~~---~~~~~G~~ll~~sL~~dg~~-~~~qe~l~~ 193 (260)
...|.+-..-.++ +++|-+..+..+-+++.+.-+..+++|.+... ..---|..-+.....-++.. -.+..|+.-
T Consensus 103 ltII~iAygEvl~--Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN~GY~Wm~~NclssaafVL~mrkri~l 180 (309)
T COG5070 103 LTIILIAYGEVLF--FGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILNPGYLWMFTNCLSSAAFVLIMRKRIKL 180 (309)
T ss_pred ceeehhHhhHHHH--hcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccCCceEEEehhhHhHHHHHHHHHHhhcc
Confidence 9999999999999 78999999999999999999999999864321 00012443333332222211 112222211
Q ss_pred cCCCccccccChHHHHhhhhhcccccHHH
Q 024937 194 VNPDTTQVIKHPLQLAYEYKNNLSQKCIF 222 (260)
Q Consensus 194 ~~~~~~~~~~~~~e~lf~y~h~lslp~i~ 222 (260)
+ .+.-.|++| |++++++|.++
T Consensus 181 t-------Nf~d~dtmf-YnNllslPiL~ 201 (309)
T COG5070 181 T-------NFKDFDTMF-YNNLLSLPILL 201 (309)
T ss_pred c-------ccchhhHHH-HhhhHHHHHHH
Confidence 0 112358999 99999999555
No 15
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=97.88 E-value=0.00025 Score=62.60 Aligned_cols=133 Identities=14% Similarity=0.072 Sum_probs=99.1
Q ss_pred chHHHHHHHHHHHHHHH-HHhccCCCCCCchHHHHHHHH-HHHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhcc
Q 024937 54 GWYFTFVQGFVYLVLIY-LQGFTTKQMVNPWKTYVKLSA-VLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIP 131 (260)
Q Consensus 54 ~~~ltf~qfl~~~~~~~-~~~~~~~~~~~P~~~y~~~s~-~~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~ 131 (260)
...+.+..++...++.. ....+ +++..++.+...+. .......+-+.|++|++...-.+..+..|+.+++++.++
T Consensus 18 ~~~~~~~r~~~~~l~l~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~~~l~- 94 (260)
T TIGR00950 18 LYFAVFRRLIFALLLLLPLLRRR--PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDLM- 94 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc--cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHhhhHHHHHHHHHHH-
Confidence 34556666554433221 11111 22233444555544 456777888999999999999999999999999999999
Q ss_pred ccccccCchhhHHHHHHHHHHHHhcccCCCCCCChhHHHHHHHHHHHHHHHhHHHHHHHHHh
Q 024937 132 GLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVMDSFLGNLQEVIFT 193 (260)
Q Consensus 132 g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~~~~~~~~G~~ll~~sL~~dg~~~~~qe~l~~ 193 (260)
.|+|-+++|+..+++..+|+++....+ +.+.+..|..+.+.+.++-+..+.++.+..+
T Consensus 95 -~~e~~~~~~~~gi~i~~~Gv~li~~~~---~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~ 152 (260)
T TIGR00950 95 -GKERPRKLVLLAAVLGLAGAVLLLSDG---NLSINPAGLLLGLGSGISFALGTVLYKRLVK 152 (260)
T ss_pred -ccCCCcHHHHHHHHHHHHhHHhhccCC---cccccHHHHHHHHHHHHHHHHHHHHHhHHhh
Confidence 789999999999999999998876433 1234568999999999999999999988876
No 16
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=97.68 E-value=9e-05 Score=58.41 Aligned_cols=79 Identities=15% Similarity=0.224 Sum_probs=66.3
Q ss_pred CchHHHHHHHHHH-HHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccC
Q 024937 81 NPWKTYVKLSAVL-MGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMAD 159 (260)
Q Consensus 81 ~P~~~y~~~s~~~-~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~ 159 (260)
.|+......+... .....+.++|++|.+ +.-.+..+..|+.++++|.++ +|+|.|.+++++++++.+|+++..+.|
T Consensus 32 ~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~--~~er~~~~~~~a~~l~~~Gv~li~~~~ 108 (113)
T PF13536_consen 32 KPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLF--FKERLSPRRWLAILLILIGVILIAWSD 108 (113)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhhhh
Confidence 4554444445544 377889999999999 777899999999999999999 889999999999999999999999877
Q ss_pred CCC
Q 024937 160 AQT 162 (260)
Q Consensus 160 ~~~ 162 (260)
.++
T Consensus 109 ~~~ 111 (113)
T PF13536_consen 109 LTG 111 (113)
T ss_pred ccc
Confidence 543
No 17
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=97.57 E-value=0.0035 Score=55.26 Aligned_cols=101 Identities=15% Similarity=0.149 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHhHHHhhccCchHHHHHhhccchheeehhh-hccccccccCchhhHHHHHHHHHHHHhcccCCCCCCChh
Q 024937 89 LSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGA-FIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFS 167 (260)
Q Consensus 89 ~s~~~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~-~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~~~~~~ 167 (260)
..........+.+.+++|++.....+..+..|+.+.+++. ++ ++||-+++++..+++..+|+++....+...... .
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~--~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~-~ 152 (292)
T COG0697 76 ALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLL--LGERLSLLQILGILLALAGVLLILLGGGGGGIL-S 152 (292)
T ss_pred HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHH--ccCCCcHHHHHHHHHHHHhHHheecCCCcchhH-H
Confidence 3455667778888899999999999999999999999996 66 589999999999999999999988766433222 5
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHH
Q 024937 168 LIGVLMISGALVMDSFLGNLQEVIF 192 (260)
Q Consensus 168 ~~G~~ll~~sL~~dg~~~~~qe~l~ 192 (260)
..|..+.+.+.++.++....+++..
T Consensus 153 ~~g~~~~l~a~~~~a~~~~~~~~~~ 177 (292)
T COG0697 153 LLGLLLALAAALLWALYTALVKRLS 177 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 7899999999999999999999876
No 18
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=97.56 E-value=0.00038 Score=65.37 Aligned_cols=110 Identities=20% Similarity=0.250 Sum_probs=94.9
Q ss_pred hHHHHHHHHHHHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCCC-
Q 024937 83 WKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQ- 161 (260)
Q Consensus 83 ~~~y~~~s~~~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~- 161 (260)
..+..+.++.|..-+-+...++.+++=.+.++.=--|...+-++.+++ ++||-+++||.+.++.++|+++--+...+
T Consensus 92 ~lk~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~--L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~ 169 (345)
T KOG2234|consen 92 TLKVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLI--LRRKLSRLQWMALVLLFAGVALVQLPSLSP 169 (345)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHH--HhhhhhHHHHHHHHHHHHHHHHHhccCCCC
Confidence 444667788898888888899999998899999999999999999999 99999999999999999999998844322
Q ss_pred --CC----CChhHHHHHHHHHHHHHHHhHHHHHHHHHhc
Q 024937 162 --TS----PNFSLIGVLMISGALVMDSFLGNLQEVIFTV 194 (260)
Q Consensus 162 --~~----~~~~~~G~~ll~~sL~~dg~~~~~qe~l~~~ 194 (260)
+. ..+...|+..+..+.+.+|+.|++-|++.|+
T Consensus 170 ~~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~ 208 (345)
T KOG2234|consen 170 TGAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKG 208 (345)
T ss_pred CCccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 11 1256789999999999999999999999984
No 19
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=97.37 E-value=0.00044 Score=53.42 Aligned_cols=115 Identities=12% Similarity=0.119 Sum_probs=80.2
Q ss_pred hHHHHHhhhhhccCCCCcchHHHHHHHHHHHH-HHH--HHhccCCCCCCch---HHHHHHHHH-HHHHHHHhHHHhhccC
Q 024937 36 LVNGICEEYVYNRLQFSYGWYFTFVQGFVYLV-LIY--LQGFTTKQMVNPW---KTYVKLSAV-LMGSHGLTKGSLAFLN 108 (260)
Q Consensus 36 ~~~g~~qE~i~~~~~~~~~~~ltf~qfl~~~~-~~~--~~~~~~~~~~~P~---~~y~~~s~~-~~~~~~~~N~AL~yIs 108 (260)
-.+.+..++..++ -++...++.+++.... +.. ....+. ....+. ......+.. ...+..+.+.++++++
T Consensus 4 a~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 79 (126)
T PF00892_consen 4 AIYSVFSKKLLKK---ISPLSITFWRFLIAGILLILLLILGRKP-FKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYIS 79 (126)
T ss_pred eeHHHHHHHHhcc---CCHHHHHHHHHHHHHHHHHHHHhhcccc-ccCCChhhhhhhhHhhccceehHHHHHHHHHHhcc
Confidence 3456667777633 2244566666655442 111 111111 112222 223344444 5788889999999999
Q ss_pred chHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhc
Q 024937 109 YPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFT 156 (260)
Q Consensus 109 ~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~ 156 (260)
...-.+.....|+.++++|+++ +++|.+.+|++.+.++.+|+++..
T Consensus 80 ~~~~~~~~~~~pv~~~i~~~~~--~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 80 ASIVSILQYLSPVFAAILGWLF--LGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred hhHHHHHHHHHHHHHHHHHHHH--cCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999 789999999999999999998764
No 20
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=97.22 E-value=0.011 Score=53.95 Aligned_cols=134 Identities=9% Similarity=0.163 Sum_probs=92.0
Q ss_pred chHHHHHHHHHHHHHHHHHhccCCCCCCchHHHHHHHHH-HHHHHHHhHHHhhc-cCchHHHHHhhccchheeehhhhcc
Q 024937 54 GWYFTFVQGFVYLVLIYLQGFTTKQMVNPWKTYVKLSAV-LMGSHGLTKGSLAF-LNYPAQIMFKSTKVLPVMIMGAFIP 131 (260)
Q Consensus 54 ~~~ltf~qfl~~~~~~~~~~~~~~~~~~P~~~y~~~s~~-~~~~~~~~N~AL~y-Is~P~~il~KS~klipvMl~g~~l~ 131 (260)
+..+++..+++.......-.. +++.|++.....+.. ......+...+++| ++-..-.+.=++.|+.++++++++
T Consensus 32 p~~~~~~R~~~a~~~l~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~- 107 (299)
T PRK11453 32 PLMLAGLRFMLVAFPAIFFVA---RPKVPLNLLLGYGLTISFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFT- 107 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHhc---CCCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHH-
Confidence 455666666553322111111 123344444444443 23334456678888 766666666788899999999999
Q ss_pred ccccccCchhhHHHHHHHHHHHHhcccCCCCCCChhHHHHHHHHHHHHHHHhHHHHHHHHHh
Q 024937 132 GLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVMDSFLGNLQEVIFT 193 (260)
Q Consensus 132 g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~~~~~~~~G~~ll~~sL~~dg~~~~~qe~l~~ 193 (260)
+|||.+.++++.+++..+|+.+....+.+ ..+.+..|.++.+.+-++-+....++++..+
T Consensus 108 -l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~-~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~ 167 (299)
T PRK11453 108 -FGERLQGKQLAGIALAIFGVLVLIEDSLN-GQHVAMLGFMLTLAAAFSWACGNIFNKKIMS 167 (299)
T ss_pred -hcCcCcHHHHHHHHHHHHhHHHhccccCC-CcchhHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 78999999999999999999887743222 1223457999999999999999999999765
No 21
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=97.15 E-value=0.029 Score=53.24 Aligned_cols=108 Identities=12% Similarity=0.028 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhcccc------ccccCchhhHHHHHHHHHHHHhcccC
Q 024937 86 YVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGL------RRKYPAHEYVAALLLVFGLILFTMAD 159 (260)
Q Consensus 86 y~~~s~~~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~------~krY~~~~~~~v~lit~Gv~lf~~~~ 159 (260)
...++++-+....+.+.+++|+|--.-.+.=+..|+.+++++.++ + ++|.+.+|++.+++=.+|+++....+
T Consensus 81 l~l~g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~--~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~ 158 (358)
T PLN00411 81 IGLLGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIF--RMEKVSFKERSSVAKVMGTILSLIGALVVIFYH 158 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHH--HhchhhhcccccHHHHHHHHHHHHHHHHHHHcc
Confidence 334444333344578999999999999999999999999999998 3 69999999999999999988765422
Q ss_pred CC---------------------CCCChhHHHHHHHHHHHHHHHhHHHHHHHHHhcC
Q 024937 160 AQ---------------------TSPNFSLIGVLMISGALVMDSFLGNLQEVIFTVN 195 (260)
Q Consensus 160 ~~---------------------~~~~~~~~G~~ll~~sL~~dg~~~~~qe~l~~~~ 195 (260)
.. .+.+....|.++++.|.++=++....|.+..+++
T Consensus 159 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~ 215 (358)
T PLN00411 159 GPRVFVASSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEY 215 (358)
T ss_pred CcccccccccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 11 0012246799999999999999999999988744
No 22
>PRK11689 aromatic amino acid exporter; Provisional
Probab=97.06 E-value=0.024 Score=51.76 Aligned_cols=138 Identities=11% Similarity=-0.116 Sum_probs=90.3
Q ss_pred chHHHHHHHHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHhHHHhhccC----chHHHHHhhccchheeehhhh
Q 024937 54 GWYFTFVQGFVYLVLIYLQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLN----YPAQIMFKSTKVLPVMIMGAF 129 (260)
Q Consensus 54 ~~~ltf~qfl~~~~~~~~~~~~~~~~~~P~~~y~~~s~~~~~~~~~~N~AL~yIs----~P~~il~KS~klipvMl~g~~ 129 (260)
+..+.+.-+....++...-..+++.++.+++.....++.+.....+.+.+++|.+ -..-.+.=+..|+.+++++++
T Consensus 32 P~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~ 111 (295)
T PRK11689 32 PVGGAAMIYSVSGLLLLLTVGFPRLRQFPKRYLLAGGLLFVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVL 111 (295)
T ss_pred hHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHhHHHHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHH
Confidence 3445555554433322211112222333444333334445566667777887742 222245667789999999999
Q ss_pred ccccccccCchhhHHHHHHHHHHHHhcccCCCCC-------CChhHHHHHHHHHHHHHHHhHHHHHHHHHh
Q 024937 130 IPGLRRKYPAHEYVAALLLVFGLILFTMADAQTS-------PNFSLIGVLMISGALVMDSFLGNLQEVIFT 193 (260)
Q Consensus 130 l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~~-------~~~~~~G~~ll~~sL~~dg~~~~~qe~l~~ 193 (260)
+ .|||.+++|++.+++-.+|+++....+...+ ..+...|..+.+.|.++-+....+.+|..+
T Consensus 112 ~--~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~ 180 (295)
T PRK11689 112 F--NGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSYGLAFIGAFIWAAYCNVTRKYAR 180 (295)
T ss_pred H--hcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 9 7899999999999999999988775442111 012456999999999999999999998754
No 23
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=97.04 E-value=0.00031 Score=64.27 Aligned_cols=151 Identities=14% Similarity=0.163 Sum_probs=105.3
Q ss_pred HHHHHhhhhhcc--CCCCcchHHHHHHHHHHHHHH-HHH----hc-----cC--CCCCCchHHHHHHHHHHHHHHHHhHH
Q 024937 37 VNGICEEYVYNR--LQFSYGWYFTFVQGFVYLVLI-YLQ----GF-----TT--KQMVNPWKTYVKLSAVLMGSHGLTKG 102 (260)
Q Consensus 37 ~~g~~qE~i~~~--~~~~~~~~ltf~qfl~~~~~~-~~~----~~-----~~--~~~~~P~~~y~~~s~~~~~~~~~~N~ 102 (260)
..+++...+++. -.-+.+.++|+.|+++...+. .++ .. .+ +-+-.-.++-.+.++.+......||.
T Consensus 42 ~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVfi~mI~fnnl 121 (347)
T KOG1442|consen 42 GLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVFILMISFNNL 121 (347)
T ss_pred hhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhheeeeehhccce
Confidence 344555555532 234668899999998865422 111 10 00 11112234456788899999999999
Q ss_pred HhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCCCC--CCChhHHHHHHHHHHHHH
Q 024937 103 SLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQT--SPNFSLIGVLMISGALVM 180 (260)
Q Consensus 103 AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~--~~~~~~~G~~ll~~sL~~ 180 (260)
.|+||++..+.+.||-..+.+.+..+++ +|.|=+..-..+.++|.+| |.++-..+ .+..++.|++.-..|.+.
T Consensus 122 cL~yVgVaFYyvgRsLttvFtVlLtyvl--lkqkTs~~~~~~C~lIi~G---F~lGvdqE~~~~~ls~~GvifGVlaSl~ 196 (347)
T KOG1442|consen 122 CLKYVGVAFYYVGRSLTTVFTVLLTYVL--LKQKTSFFALGCCLLIILG---FGLGVDQEGSTGTLSWIGVIFGVLASLA 196 (347)
T ss_pred ehhhcceEEEEeccchhhhHHHHhHHhh--cccccccccceeehhheeh---heeccccccccCccchhhhHHHHHHHHH
Confidence 9999999999999999999999999999 8888888777777777666 33443322 234578899998888888
Q ss_pred HHhHHHHHHHHH
Q 024937 181 DSFLGNLQEVIF 192 (260)
Q Consensus 181 dg~~~~~qe~l~ 192 (260)
-|+-+++..+..
T Consensus 197 vAlnaiytkk~l 208 (347)
T KOG1442|consen 197 VALNAIYTKKVL 208 (347)
T ss_pred HHHHHHhhheec
Confidence 888777666433
No 24
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=97.01 E-value=0.033 Score=50.69 Aligned_cols=133 Identities=11% Similarity=0.066 Sum_probs=91.5
Q ss_pred chHHHHHHHHHHHHH--HHHHhccCC-CCCCchHHHHHHHHHH-HHHHHHhHHHh-hccCchHHHHHhhccchheeehhh
Q 024937 54 GWYFTFVQGFVYLVL--IYLQGFTTK-QMVNPWKTYVKLSAVL-MGSHGLTKGSL-AFLNYPAQIMFKSTKVLPVMIMGA 128 (260)
Q Consensus 54 ~~~ltf~qfl~~~~~--~~~~~~~~~-~~~~P~~~y~~~s~~~-~~~~~~~N~AL-~yIs~P~~il~KS~klipvMl~g~ 128 (260)
+..+++..+++..++ .+....+.+ +++..++....++... .....+-+.+. ++++-..-.+.=+..|+-+++++.
T Consensus 36 p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~ 115 (292)
T PRK11272 36 PLMMAGVRFLIAGILLLAFLLLRGHPLPTLRQWLNAALIGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSR 115 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHH
Confidence 456667666654432 222221111 1222333344455443 34566778888 889988888888999999999997
Q ss_pred hccccccccCchhhHHHHHHHHHHHHhcccCCCCCCChhHHHHHHHHHHHHHHHhHHHHHHHHH
Q 024937 129 FIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVMDSFLGNLQEVIF 192 (260)
Q Consensus 129 ~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~~~~~~~~G~~ll~~sL~~dg~~~~~qe~l~ 192 (260)
++ |||.+++|++++++-.+|+.+...++. .+....|..+.+.+-++=|..+.+++|..
T Consensus 116 ~~---~e~~~~~~~~~~~la~~Gv~ll~~~~~---~~~~~~G~l~~l~a~~~~a~~~~~~~~~~ 173 (292)
T PRK11272 116 LF---GIRTRKLEWLGIAIGLAGIVLLNSGGN---LSGNPWGAILILIASASWAFGSVWSSRLP 173 (292)
T ss_pred Hh---cccCchhHHHHHHHHHHhHHHHhcCcc---cccchHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 54 699999999999999999988754321 12345799999999999999998888754
No 25
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=96.80 E-value=0.029 Score=51.24 Aligned_cols=92 Identities=13% Similarity=0.204 Sum_probs=72.1
Q ss_pred HHHHHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCCCCCCChhHH
Q 024937 90 SAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLI 169 (260)
Q Consensus 90 s~~~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~~~~~~~~ 169 (260)
++.......+.++|++|++...-.+.-...|+.++++++++ +|||-+++|++.+++-.+|+++....+. +..
T Consensus 80 ~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~--l~E~~~~~~~~g~~l~~~Gv~li~~~~~----~~~-- 151 (296)
T PRK15430 80 AVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIF--LGERFRRMQWLAVILAICGVLVQLWTFG----SLP-- 151 (296)
T ss_pred HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHH--hcCCCcHHHHHHHHHHHHHHHHHHHHcC----Ccc--
Confidence 45566778899999999999999999999999999999999 7899999999999999999987653221 111
Q ss_pred HHHHHHHHHHHHHhHHHHHHHH
Q 024937 170 GVLMISGALVMDSFLGNLQEVI 191 (260)
Q Consensus 170 G~~ll~~sL~~dg~~~~~qe~l 191 (260)
.+.+.+.++=|+....+++.
T Consensus 152 --~~~l~aa~~~a~~~i~~r~~ 171 (296)
T PRK15430 152 --IIALGLAFSFAFYGLVRKKI 171 (296)
T ss_pred --HHHHHHHHHHHHHHHHHHhc
Confidence 22334456666677777664
No 26
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=96.64 E-value=0.0044 Score=58.91 Aligned_cols=98 Identities=16% Similarity=0.279 Sum_probs=84.6
Q ss_pred HHHHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCCCCC----CCh
Q 024937 91 AVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTS----PNF 166 (260)
Q Consensus 91 ~~~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~~----~~~ 166 (260)
..-+.++...|+||+|=++.-.+|.-|.+-..++.+|.++ ..+|+++.|.++|++=..||++.+++|+++. ++.
T Consensus 167 ~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if--~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~a~~ 244 (416)
T KOG2765|consen 167 PLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIF--PVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPASR 244 (416)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHc--CcchhhHHHHHHHHHhhccEEEEEeccccccccCCccc
Confidence 4567899999999999999999999999999999999999 4699999999999999999999999987543 235
Q ss_pred hHHHHHHHHHHHHHHHhHHHHHHH
Q 024937 167 SLIGVLMISGALVMDSFLGNLQEV 190 (260)
Q Consensus 167 ~~~G~~ll~~sL~~dg~~~~~qe~ 190 (260)
...|-++-+++-++=|+...+-.|
T Consensus 245 ~llG~llaL~sA~~YavY~vllk~ 268 (416)
T KOG2765|consen 245 PLLGNLLALLSALLYAVYTVLLKR 268 (416)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHh
Confidence 688999888888887777665543
No 27
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=96.55 E-value=0.031 Score=45.30 Aligned_cols=68 Identities=7% Similarity=0.113 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcc
Q 024937 88 KLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTM 157 (260)
Q Consensus 88 ~~s~~~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~ 157 (260)
..+...+..+..+...+++.|--++.+....|-+.+.++|+++ ++++.+..+++..++..+|+++.++
T Consensus 86 ~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~--f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 86 LSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIF--FGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhh--cCCcCCHHHHHHHHHHHHHHheeeC
Confidence 4466777888999999999999999999999999999999999 7899999999999999999987653
No 28
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=96.50 E-value=0.067 Score=48.34 Aligned_cols=96 Identities=9% Similarity=0.059 Sum_probs=73.8
Q ss_pred HHHHHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCCCCCCChhHH
Q 024937 90 SAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLI 169 (260)
Q Consensus 90 s~~~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~~~~~~~~ 169 (260)
+........+-+.++++.+...-.+.-...|+-+.++|+++ +++|.+.++++.+.+...|+.+....+.. +.+..
T Consensus 70 ~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~--~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~---~~~~~ 144 (281)
T TIGR03340 70 AVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLT--LGETLSPLAWLGILIITLGLLVLGLSRFA---QHRRK 144 (281)
T ss_pred HHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHhccccc---ccchh
Confidence 34466777788999999999988888888899999999999 78999999999999999999877654321 12345
Q ss_pred HHHHHHHHHHHHHhHHHHHHH
Q 024937 170 GVLMISGALVMDSFLGNLQEV 190 (260)
Q Consensus 170 G~~ll~~sL~~dg~~~~~qe~ 190 (260)
|..+.+.+-++-+......++
T Consensus 145 g~~~~l~aal~~a~~~i~~k~ 165 (281)
T TIGR03340 145 AYAWALAAALGTAIYSLSDKA 165 (281)
T ss_pred HHHHHHHHHHHHHHhhhhccc
Confidence 776666666666666654443
No 29
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=96.10 E-value=0.024 Score=50.30 Aligned_cols=97 Identities=8% Similarity=0.030 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCCCCCCCh
Q 024937 87 VKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNF 166 (260)
Q Consensus 87 ~~~s~~~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~~~~~ 166 (260)
...+........+-++|++|++...-.+.-.+.|+-+++++.++ +|||-++++++++++-.+|+++....+ .+.
T Consensus 74 ~~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~--l~Ek~~~~~~l~~~~~~~Gv~li~~~~----~~~ 147 (256)
T TIGR00688 74 LLCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVF--LKERISRFQFIAVIIATLGVISNIVLK----GSL 147 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHH--HhcCCCHHHHHHHHHHHHHHHHHHHHc----CCc
Confidence 34455567778899999999999999999999999999999999 889999999999999999998765422 111
Q ss_pred hHHHHHHHHHHHHHHHhHHHHHHHHHh
Q 024937 167 SLIGVLMISGALVMDSFLGNLQEVIFT 193 (260)
Q Consensus 167 ~~~G~~ll~~sL~~dg~~~~~qe~l~~ 193 (260)
. .+.+.+-++-+.....++|..+
T Consensus 148 ~----~~~l~aa~~~a~~~i~~~~~~~ 170 (256)
T TIGR00688 148 P----WEALVLAFSFTAYGLIRKALKN 170 (256)
T ss_pred h----HHHHHHHHHHHHHHHHHhhcCC
Confidence 1 1234556666777777776543
No 30
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=95.77 E-value=0.53 Score=42.86 Aligned_cols=166 Identities=13% Similarity=0.083 Sum_probs=96.7
Q ss_pred cCCCchhHHHHHHHHHHHHHHhHHHHHhhhhhccCCCCcchHHHHHHHHHHHHHHH--HHhccCCCCCCchHHHHHHHHH
Q 024937 15 LSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFVQGFVYLVLIY--LQGFTTKQMVNPWKTYVKLSAV 92 (260)
Q Consensus 15 ~~~~~~~~~l~~~~~gIf~~~~~~g~~qE~i~~~~~~~~~~~ltf~qfl~~~~~~~--~~~~~~~~~~~P~~~y~~~s~~ 92 (260)
+.++|++.-....+.+.........+.+ ... . +.+ +..+.+..+++..+... .+..+.+.++..++.....+..
T Consensus 5 ~~~~~~~~~~~~~~la~~~~~~~~~~~K-~~~-~-~~~-~~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~g~~ 80 (293)
T PRK10532 5 LRKLPVWLPILLLLIAMASIQSGASLAK-SLF-P-LVG-APGVTALRLALGTLILIAIFKPWRLRFAKEQRLPLLFYGVS 80 (293)
T ss_pred ccccccchHHHHHHHHHHHHHhhHHHHH-HHH-H-HcC-HHHHHHHHHHHHHHHHHHHHhHHhccCCHHHHHHHHHHHHH
Confidence 4566666655555555554444444333 333 1 222 33466777766543222 2211111111222334455666
Q ss_pred HHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCCCCCCChhHHHHH
Q 024937 93 LMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVL 172 (260)
Q Consensus 93 ~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~~~~~~~~G~~ 172 (260)
......+.+++++|++...-.+.-...|+.+++++ +||-. +...+.+..+|+.+....+.+ ..+.+..|.+
T Consensus 81 ~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~------~~~~~--~~~~~~i~~~Gv~li~~~~~~-~~~~~~~G~l 151 (293)
T PRK10532 81 LGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFS------SRRPV--DFVWVVLAVLGLWFLLPLGQD-VSHVDLTGAA 151 (293)
T ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh------cCChH--HHHHHHHHHHHHheeeecCCC-cccCChHHHH
Confidence 77777888999999998888777777777776554 24433 334455556777665432221 2233567999
Q ss_pred HHHHHHHHHHhHHHHHHHHHh
Q 024937 173 MISGALVMDSFLGNLQEVIFT 193 (260)
Q Consensus 173 ll~~sL~~dg~~~~~qe~l~~ 193 (260)
+.+.+.++=+......++..+
T Consensus 152 l~l~aa~~~a~~~v~~r~~~~ 172 (293)
T PRK10532 152 LALGAGACWAIYILSGQRAGA 172 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999888888765
No 31
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=95.56 E-value=0.092 Score=48.61 Aligned_cols=110 Identities=15% Similarity=0.245 Sum_probs=93.7
Q ss_pred chHH--HHHHHHHHHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccC
Q 024937 82 PWKT--YVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMAD 159 (260)
Q Consensus 82 P~~~--y~~~s~~~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~ 159 (260)
|++. +++.+++=...+.+=|..|.+=+=.-.++.|-+-.|.|=+++.-+ ++++-..+||+....+..|+++....|
T Consensus 83 pf~p~lfl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~--Ln~ti~~~qWl~i~fv~lGlviVg~~d 160 (372)
T KOG3912|consen 83 PFNPVLFLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMF--LNRTITGRQWLGILFVSLGLVIVGSLD 160 (372)
T ss_pred CCCcceecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHH--HhcccchhhHHHHHHHHhhhheeeeee
Confidence 5554 445677777778888889999888888999999999999999999 889999999999999999999888775
Q ss_pred CCC------CCChhHHHHHHHHHHHHHHHhHHHHHHHHHh
Q 024937 160 AQT------SPNFSLIGVLMISGALVMDSFLGNLQEVIFT 193 (260)
Q Consensus 160 ~~~------~~~~~~~G~~ll~~sL~~dg~~~~~qe~l~~ 193 (260)
-.. +.+.-..|.+++..+-++-|..-.++|+..+
T Consensus 161 ~~~~~~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~ 200 (372)
T KOG3912|consen 161 VHLVTDPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLK 200 (372)
T ss_pred cccccCCccccccchhhhHHHHHHHHHHHHHHHHHHhhhh
Confidence 321 1234578999999999999999999999988
No 32
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=94.96 E-value=0.26 Score=43.27 Aligned_cols=58 Identities=14% Similarity=0.211 Sum_probs=54.0
Q ss_pred HHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHH
Q 024937 93 LMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGL 152 (260)
Q Consensus 93 ~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv 152 (260)
...+..+.++++++++...-.+.....|+..+++++++ ++++.+..+++.+.++..|+
T Consensus 202 ~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~--~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 202 TALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLI--LGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHH--hCCCCCHHHHHHHHHHHHhc
Confidence 45677789999999999999999999999999999999 78999999999999999986
No 33
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=94.94 E-value=0.058 Score=42.75 Aligned_cols=64 Identities=11% Similarity=0.047 Sum_probs=57.2
Q ss_pred HHHHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhc
Q 024937 91 AVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFT 156 (260)
Q Consensus 91 ~~~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~ 156 (260)
..+..+..+-..+++.+|...--..-+..++-+++.|+++ +++|-+.+|++.+.++.+|+++..
T Consensus 45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~--f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKL--WHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHh
Confidence 5577788888999999888887777889999999999999 889999999999999999998764
No 34
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=94.81 E-value=0.56 Score=42.67 Aligned_cols=65 Identities=12% Similarity=0.159 Sum_probs=57.4
Q ss_pred HHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCCCC
Q 024937 96 SHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQT 162 (260)
Q Consensus 96 ~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~ 162 (260)
.+.+.+.+++++|-.+..+.=..||+..+++|+++ ++++-+..+++..+++.+|+.+....+.++
T Consensus 234 ~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~--lge~lt~~~~~G~~lil~Gv~l~~~~k~~~ 298 (302)
T TIGR00817 234 YQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILF--FGTKISPQQVFGTGIAIAGVFLYSRVKAQK 298 (302)
T ss_pred HHHHHHHHHccCCchHHHHHhhhhhhheeeeehhh--cCCCCchhHHHHHHHHHHHHHHHHHHhccC
Confidence 33566689999999999999999999999999999 789999999999999999999988765443
No 35
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=93.95 E-value=0.44 Score=43.67 Aligned_cols=71 Identities=8% Similarity=0.154 Sum_probs=55.9
Q ss_pred HHHHHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCCCC
Q 024937 90 SAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQT 162 (260)
Q Consensus 90 s~~~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~ 162 (260)
+.+.......-+...+..+=.+..+.-..+-+.++++++++ ++++.++.+++.++++..|+.+-.+.+.++
T Consensus 232 s~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~--f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~ 302 (303)
T PF08449_consen 232 SLTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVII--FGHPLSPLQWIGIVLVFAGIFLYSYAKKKK 302 (303)
T ss_pred HHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHh--cCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence 33333333344555666777888899999999999999999 679999999999999999999988876543
No 36
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=93.58 E-value=0.87 Score=43.23 Aligned_cols=66 Identities=15% Similarity=0.175 Sum_probs=59.5
Q ss_pred HHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCCC
Q 024937 94 MGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQ 161 (260)
Q Consensus 94 ~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~ 161 (260)
..+-++.|+++++++-..--++-..-|+..+++|+++ ++++-++.+++..++|.+|+.+...++.+
T Consensus 267 ~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~--LgE~lt~~~~iG~~LIl~Gv~l~~~~~~~ 332 (358)
T PLN00411 267 SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIF--LNDSLYLGCLIGGILITLGFYAVMWGKAN 332 (358)
T ss_pred HHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHH--hCCCCcHHHHHHHHHHHHHHHHHHhhhhh
Confidence 3466788999999999999999999999999999999 78999999999999999999999876543
No 37
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=93.10 E-value=1.4 Score=40.19 Aligned_cols=99 Identities=9% Similarity=0.114 Sum_probs=73.2
Q ss_pred HHHHHHHHHhHHHhhccCchHHHHHhh-ccchheeehhhhccccccccCchh----hHHHHHHHHHHHHhcccCCCCCC-
Q 024937 91 AVLMGSHGLTKGSLAFLNYPAQIMFKS-TKVLPVMIMGAFIPGLRRKYPAHE----YVAALLLVFGLILFTMADAQTSP- 164 (260)
Q Consensus 91 ~~~~~~~~~~N~AL~yIs~P~~il~KS-~klipvMl~g~~l~g~~krY~~~~----~~~v~lit~Gv~lf~~~~~~~~~- 164 (260)
......+.+-..|.+|+++.+-+..=+ .-++-++++|.++ +|++.+.+| +++++++.+|+++....++++..
T Consensus 67 ~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~--f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~ 144 (290)
T TIGR00776 67 AFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIV--FGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGI 144 (290)
T ss_pred HHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHH--hhhccchHHHHHHHHHHHHHHHhHheEEecccccccc
Confidence 335566677778888877777655555 5566788899999 789999999 99999999999988776543221
Q ss_pred ---ChhHHHHHHHHHHHHHHHhHHHHHHHH
Q 024937 165 ---NFSLIGVLMISGALVMDSFLGNLQEVI 191 (260)
Q Consensus 165 ---~~~~~G~~ll~~sL~~dg~~~~~qe~l 191 (260)
.+...|+.+.++|-++=+.....-++.
T Consensus 145 ~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~ 174 (290)
T TIGR00776 145 KSEFNFKKGILLLLMSTIGYLVYVVVAKAF 174 (290)
T ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 223679988888877777777766643
No 38
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=92.56 E-value=0.34 Score=39.15 Aligned_cols=74 Identities=8% Similarity=0.153 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHHHHhHHHhhccCchH-HHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCC
Q 024937 85 TYVKLSAVLMGSHGLTKGSLAFLNYPA-QIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADA 160 (260)
Q Consensus 85 ~y~~~s~~~~~~~~~~N~AL~yIs~P~-~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~ 160 (260)
.+......+..+..+=..|+++++..+ +-+.-....+-+.++|+++ ++++.++.|++.+.+|.+|+++.-+.++
T Consensus 32 ~~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~--f~E~~s~~~~~gi~lIi~GVi~l~l~~~ 106 (120)
T PRK10452 32 GFILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLL--FDESLSLMKIAGLTTLVAGIVLIKSGTR 106 (120)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHH--hCCCCCHHHHHHHHHHHHHHHHhhcCCC
Confidence 355666777777888888999977654 3445677899999999999 8899999999999999999998877654
No 39
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=92.56 E-value=0.42 Score=38.93 Aligned_cols=69 Identities=12% Similarity=0.098 Sum_probs=51.5
Q ss_pred HHHHHHHHHHhHHHhhccCchHHHHHhhccchheeehhhh--ccccccccCchhhHHHHHHHHHHHHhcccCC
Q 024937 90 SAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAF--IPGLRRKYPAHEYVAALLLVFGLILFTMADA 160 (260)
Q Consensus 90 s~~~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~--l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~ 160 (260)
...+..+..+-+.+++.++...---+=|.-.+-+++.++. + ++++-++.|++.+++|.+|+++...+++
T Consensus 55 l~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~--~~E~ls~~~~iGi~lIi~GV~lv~~~~~ 125 (129)
T PRK02971 55 LAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPW--FNETFSLKKTLGVACIMLGVWLINLPTT 125 (129)
T ss_pred HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHH--cCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence 4567788889999999966544443334444556666663 6 6799999999999999999999876554
No 40
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=90.87 E-value=2 Score=38.93 Aligned_cols=65 Identities=12% Similarity=0.132 Sum_probs=58.1
Q ss_pred HHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccC
Q 024937 93 LMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMAD 159 (260)
Q Consensus 93 ~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~ 159 (260)
...+..+-++++++++-..-.+.-...|+..++.|+++ ++++.+..+++..+++..|+.+....+
T Consensus 223 s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~--l~E~~t~~~iiG~~lIi~gv~~~~~~~ 287 (292)
T PRK11272 223 SIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGL--GGETLSPIEWLALGVIVFAVVLVTLGK 287 (292)
T ss_pred HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHH--cCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 34556788999999999999999999999999999999 789999999999999999999877644
No 41
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=89.23 E-value=0.0028 Score=57.66 Aligned_cols=84 Identities=13% Similarity=0.367 Sum_probs=68.2
Q ss_pred cCCCCCCchHHHHHHHHHHHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHH
Q 024937 75 TTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLIL 154 (260)
Q Consensus 75 ~~~~~~~P~~~y~~~s~~~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~l 154 (260)
|++--++-+++|...++.=.-++.+=-.|.+|=|..--.+.-|-....+|+..|++ ++.||.+.|+..|+.--+|+++
T Consensus 70 R~~~~~~~~~hYilla~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~f--LktrYrlmki~gV~iCi~Gvvm 147 (336)
T KOG2766|consen 70 RRKYIKAKWRHYILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFF--LKTRYRLMKISGVVICIVGVVM 147 (336)
T ss_pred hhHHHHHHHHHhhheeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHH--HHHHHhhheeeeEEeEecceEE
Confidence 33444567888888776655444444578899999999999999999999999999 9999999999999988889988
Q ss_pred hcccCC
Q 024937 155 FTMADA 160 (260)
Q Consensus 155 f~~~~~ 160 (260)
...+|-
T Consensus 148 vV~sDV 153 (336)
T KOG2766|consen 148 VVFSDV 153 (336)
T ss_pred EEEeee
Confidence 877663
No 42
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=89.18 E-value=1.4 Score=35.03 Aligned_cols=71 Identities=10% Similarity=0.151 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHhHHHhhccCchHHHHHhh-ccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCC
Q 024937 88 KLSAVLMGSHGLTKGSLAFLNYPAQIMFKS-TKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADA 160 (260)
Q Consensus 88 ~~s~~~~~~~~~~N~AL~yIs~P~~il~KS-~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~ 160 (260)
.....+..+..+=..|++.+|..+---.-+ ...+-+.++|+++ ++++-++.|++...+|.+|+++..+.++
T Consensus 35 ~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~--f~e~~~~~~~~gi~lIi~GVi~l~l~~~ 106 (110)
T PRK09541 35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGF--FGQRLDLPAIIGMMLICAGVLVINLLSR 106 (110)
T ss_pred HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHhcCCC
Confidence 344555566666677888888776555555 4788889999999 8899999999999999999998876553
No 43
>PRK11689 aromatic amino acid exporter; Provisional
Probab=88.73 E-value=3.7 Score=37.32 Aligned_cols=66 Identities=9% Similarity=-0.019 Sum_probs=57.8
Q ss_pred HHHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccC
Q 024937 92 VLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMAD 159 (260)
Q Consensus 92 ~~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~ 159 (260)
....+-.+-|+++++++-..-.++=...|+...++|+++ ++++-+..+++..++|.+|+.+....+
T Consensus 224 ~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~--lgE~~~~~~~iG~~lI~~gv~~~~~~~ 289 (295)
T PRK11689 224 AMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALL--LSTPLSFSFWQGVAMVTAGSLLCWLAT 289 (295)
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHH--hCCCCcHHHHHHHHHHHHhHHHHhhhH
Confidence 344566778999999998888888899999999999999 789999999999999999998887654
No 44
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=88.67 E-value=8.2 Score=36.24 Aligned_cols=65 Identities=11% Similarity=0.205 Sum_probs=56.1
Q ss_pred HHHHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcc
Q 024937 91 AVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTM 157 (260)
Q Consensus 91 ~~~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~ 157 (260)
+.++..+.++..+++.++--++.++=..|++.+.++|+++ ++++-+..+++..+++.+|+.+.++
T Consensus 284 l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~--~ge~lt~~~~iG~~lii~Gv~lYs~ 348 (350)
T PTZ00343 284 VWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIII--FQTQVTLLGYLGMAVAILGALLYSL 348 (350)
T ss_pred HHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHH--hCCCCchHhHHHHHHHHHHHHHHhh
Confidence 3444444445569999999999999999999999999999 7899999999999999999988765
No 45
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=87.76 E-value=5.7 Score=36.05 Aligned_cols=67 Identities=12% Similarity=-0.014 Sum_probs=59.1
Q ss_pred HHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCCC
Q 024937 93 LMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQ 161 (260)
Q Consensus 93 ~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~ 161 (260)
...+..+.|+++++++-..--+.=..-|+...++|+++ ++++.+..+++..++|..|++.......+
T Consensus 219 t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~--lgE~~~~~~~iG~~lIl~~~~~~~~~~~~ 285 (293)
T PRK10532 219 TALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIF--LGETLTLIQWLALGAIIAASMGSTLTIRR 285 (293)
T ss_pred HHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHH--hCCCCcHHHHHHHHHHHHHHHHHHhcCCC
Confidence 45566688999999999999999999999999999999 78999999999999999999988765543
No 46
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=85.18 E-value=11 Score=34.15 Aligned_cols=65 Identities=12% Similarity=0.111 Sum_probs=55.0
Q ss_pred HHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCC
Q 024937 94 MGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADA 160 (260)
Q Consensus 94 ~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~ 160 (260)
..+-.+-++++++++-..--+.-..-|+...+.|+++ ++++-+..+++..++|.+|+.+...++.
T Consensus 226 ~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~--lgE~~~~~~~iG~~lI~~gv~l~~~~~~ 290 (299)
T PRK11453 226 IVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALL--LDERLTGLQFLGAVLIMAGLYINVFGLR 290 (299)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH--hCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence 3455577888888887777788888899999999999 7799999999999999999998877553
No 47
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=84.87 E-value=16 Score=33.16 Aligned_cols=66 Identities=14% Similarity=0.088 Sum_probs=57.3
Q ss_pred HHHHHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcc
Q 024937 90 SAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTM 157 (260)
Q Consensus 90 s~~~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~ 157 (260)
+.....+..+-|+++++++-..--+.-...|+...++|+++ ++++.+..+++..++|.+|+.+...
T Consensus 220 g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~--l~E~~~~~~~~G~~lI~~~~~v~~~ 285 (296)
T PRK15430 220 GIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTF--YGEKPGADKMVTFAFIWVALAIFVM 285 (296)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 33455677899999999998888899999999999999999 7899999999999999888776654
No 48
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=83.75 E-value=8.4 Score=30.55 Aligned_cols=72 Identities=10% Similarity=0.118 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHHHhHHHhhccCchH-HHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccC
Q 024937 86 YVKLSAVLMGSHGLTKGSLAFLNYPA-QIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMAD 159 (260)
Q Consensus 86 y~~~s~~~~~~~~~~N~AL~yIs~P~-~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~ 159 (260)
+......+..+-.+=-.|+|++|..+ +-+---...+-+-+.|+++ ++++-+..|.+...++.+|++.--+.+
T Consensus 33 ~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~--f~E~l~~~~~~gl~LiiaGvi~Lk~~s 105 (106)
T COG2076 33 SILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLL--FGESLSLIKLLGLALILAGVIGLKLGS 105 (106)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHh--cCCcCCHHHHHHHHHHHHHHHHhhhcC
Confidence 34455555566666678889877665 3445555788888999999 889999999999999999998766543
No 49
>PRK11431 multidrug efflux system protein; Provisional
Probab=82.90 E-value=4.1 Score=32.05 Aligned_cols=70 Identities=14% Similarity=0.197 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHhHHHhhccCchH-HHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhccc
Q 024937 87 VKLSAVLMGSHGLTKGSLAFLNYPA-QIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMA 158 (260)
Q Consensus 87 ~~~s~~~~~~~~~~N~AL~yIs~P~-~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~ 158 (260)
......+..+..+=..|+|.+|..+ +-+-=....+-+-++|+++ ++++-++.|++...++.+|++.-.+.
T Consensus 33 ~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~--f~e~~~~~~~~gi~lIi~GVv~l~l~ 103 (105)
T PRK11431 33 IITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVL--LGESASPARLLSLALIVAGIIGLKLS 103 (105)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHH--hCCCCCHHHHHHHHHHHHHHHhhhcc
Confidence 4445566666666677888877665 3444456778888999999 78999999999999999999986544
No 50
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=82.30 E-value=21 Score=31.05 Aligned_cols=62 Identities=16% Similarity=0.223 Sum_probs=54.6
Q ss_pred HHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhccc
Q 024937 95 GSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMA 158 (260)
Q Consensus 95 ~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~ 158 (260)
.+..+-+.+++.++...-.+.-...++..+++++++ ++++.+..+++.++++..|+++....
T Consensus 227 i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~--~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 227 LAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLL--LGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHH--hCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 356777889999999888888888888888999999 78999999999999999999988765
No 51
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=81.24 E-value=2 Score=39.79 Aligned_cols=70 Identities=14% Similarity=0.226 Sum_probs=59.8
Q ss_pred HHHHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCCCC
Q 024937 91 AVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQT 162 (260)
Q Consensus 91 ~~~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~ 162 (260)
.++.....++-.|+.+-|-.+-.=.-+..++.+.+++..+ +++|.+.++++.++++.+|.++.....+++
T Consensus 58 ~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~--l~e~~~~~~~~G~~l~i~G~~liv~~~~~~ 127 (300)
T PF05653_consen 58 LLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFF--LGEKLTRRDIVGCALIILGSVLIVIFAPKE 127 (300)
T ss_pred HHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHH--hcccchHhHHhhHHHHHhhheeeEEeCCCC
Confidence 4556777888899999888887777899999999999999 889999999999999999998776655443
No 52
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=79.97 E-value=2.7 Score=37.36 Aligned_cols=95 Identities=18% Similarity=0.280 Sum_probs=73.1
Q ss_pred HHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCCCCCCChhHHHHHHH
Q 024937 95 GSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMI 174 (260)
Q Consensus 95 ~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~~~~~~~~G~~ll 174 (260)
+++.+--.||+-+|-....-.-+|.-..|.++.+++ ++.|+.-.|++++++-..|+++..+.|.... ..+.|+...
T Consensus 65 ~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IV--L~D~~~~~kIlaailAI~GiVmiay~DN~~a--~e~iGi~~A 140 (290)
T KOG4314|consen 65 GANYLYLLALKKISASDASAIFACNAAFVFILAIIV--LGDRFMGFKILAAILAIGGIVMIAYADNEHA--DEIIGIACA 140 (290)
T ss_pred cCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHH--hccchhhhhHHHHHHHhCcEEEEEeccchhh--hhhhhHHHH
Confidence 334444457777777776777778888888899999 7899999999999999999999998875332 357899999
Q ss_pred HHHHHHHHhHHHHHHHHHh
Q 024937 175 SGALVMDSFLGNLQEVIFT 193 (260)
Q Consensus 175 ~~sL~~dg~~~~~qe~l~~ 193 (260)
..|-++.++.-..-.+...
T Consensus 141 V~SA~~aAlYKV~FK~~iG 159 (290)
T KOG4314|consen 141 VGSAFMAALYKVLFKMFIG 159 (290)
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 9888887777665555443
No 53
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=78.83 E-value=4.6 Score=32.39 Aligned_cols=48 Identities=17% Similarity=0.308 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHhcCCCccccccChHHHHhhhhhccccc
Q 024937 170 GVLMISGALVMDSFLGNLQEVIFTVNPDTTQVIKHPLQLAYEYKNNLSQK 219 (260)
Q Consensus 170 G~~ll~~sL~~dg~~~~~qe~l~~~~~~~~~~~~~~~e~lf~y~h~lslp 219 (260)
|+.+.+.|.++.|++..++|+++++.. ..+...++.+.++ |+...+.+
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~-~~~~~~~~~~l~~-~~~~~s~~ 48 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVS-SNSKKLNPLNLLY-YNSPISFI 48 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhccc-ccccCCCHHHHHH-HHHHHHHH
Confidence 788999999999999999999998521 1234566677777 56655544
No 54
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=78.21 E-value=6.8 Score=31.06 Aligned_cols=68 Identities=7% Similarity=0.232 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHHHHhHHHhhccCchH-HHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHh
Q 024937 86 YVKLSAVLMGSHGLTKGSLAFLNYPA-QIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILF 155 (260)
Q Consensus 86 y~~~s~~~~~~~~~~N~AL~yIs~P~-~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf 155 (260)
.......+..+..+=..|+|.+|.-+ +-+.=..+.+-+-+.|+++ ++++.++.|++.+.+|.+|++.-
T Consensus 38 ~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~--f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 38 GILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWIL--FGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHH--cCCCCCHHHHHHHHHHHHHHHHh
Confidence 34445556666666677888877655 3444556778889999999 78999999999999999999874
No 55
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=77.50 E-value=8.5 Score=33.33 Aligned_cols=70 Identities=11% Similarity=0.270 Sum_probs=57.4
Q ss_pred chHHHHHHHHHHHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHH
Q 024937 82 PWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLIL 154 (260)
Q Consensus 82 P~~~y~~~s~~~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~l 154 (260)
|...+. ..+.......+-++.+||-+=-+..+.-+...+.+.++++++ +++.-+..+++.+.++..|+.+
T Consensus 152 ~~~~~~-~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~--f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 152 PTAVWI-VGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRL--FDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred chHHHH-HHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHH--hcCCccHHHHHHHHHHHeeeEe
Confidence 444443 334555666778899999888899999999999999999999 7799999999999999888754
No 56
>COG2510 Predicted membrane protein [Function unknown]
Probab=73.64 E-value=13 Score=30.78 Aligned_cols=70 Identities=20% Similarity=0.308 Sum_probs=48.7
Q ss_pred HHHHHHHHHH-HHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcc
Q 024937 86 YVKLSAVLMG-SHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTM 157 (260)
Q Consensus 86 y~~~s~~~~~-~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~ 157 (260)
|+..+-.-.. +..+=..|++-=..|--+=.-+.+++-+.++++++ +++|-+..+++-+.+|++|+++-.+
T Consensus 69 flilSGla~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lf--L~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 69 FLILSGLAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILF--LGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred hhhHHHHHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHH--hcCCCCHHHHHHHHHHHhCeeeEec
Confidence 5555444333 33344566665333333334566778889999999 8899999999999999999887543
No 57
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=72.62 E-value=2.4 Score=38.13 Aligned_cols=60 Identities=15% Similarity=0.367 Sum_probs=51.6
Q ss_pred HHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHH
Q 024937 93 LMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLIL 154 (260)
Q Consensus 93 ~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~l 154 (260)
...+..+-++++++++-..-.......|+...++|+++ ++++-+..+++..+++.+|+++
T Consensus 221 s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~--lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 221 IGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWF--LNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHH--hCCCccHHHHHHHHHHHHhHHh
Confidence 44566678899999887777777777889999999999 7899999999999999999875
No 58
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=68.54 E-value=18 Score=34.21 Aligned_cols=39 Identities=18% Similarity=0.445 Sum_probs=33.1
Q ss_pred heeehhhhccccccccCchhhHHHHHHHHHHHHhcccCCCC
Q 024937 122 PVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQT 162 (260)
Q Consensus 122 pvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~ 162 (260)
-.+++|+++ ++.+.++..+++.++|.+|++++...+++.
T Consensus 272 ~ali~~i~~--f~~~~~~ly~~af~lIiiG~vvy~~~~~~~ 310 (334)
T PF06027_consen 272 YALIIDIFF--FGYKFSWLYILAFALIIIGFVVYNLAESPE 310 (334)
T ss_pred HHHHHHHHh--cCccccHHHHHHHHHHHHHhheEEccCCcc
Confidence 357889988 678899999999999999999999877643
No 59
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=68.40 E-value=67 Score=29.94 Aligned_cols=72 Identities=13% Similarity=0.155 Sum_probs=62.7
Q ss_pred HHHHHHHHHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccC
Q 024937 86 YVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMAD 159 (260)
Q Consensus 86 y~~~s~~~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~ 159 (260)
....+........+-..|-+.+++++-=+..=..|.-.++.++++ +++..+..|+.+-+.|=.|+++++.+.
T Consensus 214 Lv~aG~vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i--~~E~~~~~~~~~F~~IW~aL~l~~~d~ 285 (293)
T COG2962 214 LVLAGLVTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLI--FGEPFDSDQLVTFAFIWLALALFSIDG 285 (293)
T ss_pred HHHhhHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH--cCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 444566677777888889999999999999999999999999999 679999999999999999999998753
No 60
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=62.53 E-value=6.2 Score=31.58 Aligned_cols=68 Identities=12% Similarity=0.096 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHHhHHHhhccCchHHH-HHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHh
Q 024937 86 YVKLSAVLMGSHGLTKGSLAFLNYPAQI-MFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILF 155 (260)
Q Consensus 86 y~~~s~~~~~~~~~~N~AL~yIs~P~~i-l~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf 155 (260)
|..--+.+-.+|+.=+..+.--+.+.-+ +.-|...+.+.+.|+++ .+|.-+.+.++-+.++..|++++
T Consensus 44 y~ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~l--ge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 44 YIIPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLL--GEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHh--cCcccchhHHHHHHHHHcCeeee
Confidence 4444445555555555666664444433 34688999999999999 56777888999999999999865
No 61
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=60.61 E-value=2 Score=39.76 Aligned_cols=73 Identities=12% Similarity=0.243 Sum_probs=59.9
Q ss_pred chHHHHHH-HHHHHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhc
Q 024937 82 PWKTYVKL-SAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFT 156 (260)
Q Consensus 82 P~~~y~~~-s~~~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~ 156 (260)
+-|+|+++ +.+=+.+..+.++|++|.|..=.++.-=+.|+.+.++.+++ +|++|+..+.+...+--.||++..
T Consensus 95 g~R~~LiLRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~--LkE~~t~~eaL~s~itl~GVVLIv 168 (346)
T KOG4510|consen 95 GKRKWLILRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAF--LKEPFTKFEALGSLITLLGVVLIV 168 (346)
T ss_pred CcEEEEEeehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHH--HcCCCcHHHHHHHHHhhheEEEEe
Confidence 34555543 34444566788999999999888888889999999999999 999999999999999999998754
No 62
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=58.94 E-value=80 Score=28.70 Aligned_cols=68 Identities=13% Similarity=0.098 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHhHHHhh-ccCchHHHHHhhccchheeehhhhccccccccCchhh----HHHHHHHHHHHHhccc
Q 024937 89 LSAVLMGSHGLTKGSLA-FLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEY----VAALLLVFGLILFTMA 158 (260)
Q Consensus 89 ~s~~~~~~~~~~N~AL~-yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~----~~v~lit~Gv~lf~~~ 158 (260)
.++....+..+=..+++ ++...+--+.=+.-|+...++|+++ ++|+.+.+|+ +..+++..|+++-.++
T Consensus 217 ~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~--l~E~~~~~~~~~~~iG~~lIi~~~~l~~~~ 289 (290)
T TIGR00776 217 PGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILI--LGEKKTKREMIAISVGIILIIIAANILGIG 289 (290)
T ss_pred HHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHH--hccCCCcceeehhHHHHHHHHHHHHHHhcc
Confidence 44455555555557778 8888887777778899999999999 8899999999 8888888888876543
No 63
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=57.82 E-value=1.7e+02 Score=27.55 Aligned_cols=147 Identities=10% Similarity=0.076 Sum_probs=92.3
Q ss_pred EEeeecCCC----chhHHHHHHHHHHHHHHhHHHHHhhhhhc--cCCCCcchHHHH---HHHHHHHHH----HHHHhccC
Q 024937 10 LFGVSLSDR----PRWQQFLICSSGFFFGYLVNGICEEYVYN--RLQFSYGWYFTF---VQGFVYLVL----IYLQGFTT 76 (260)
Q Consensus 10 ~~g~~~~~~----~~~~~l~~~~~gIf~~~~~~g~~qE~i~~--~~~~~~~~~ltf---~qfl~~~~~----~~~~~~~~ 76 (260)
++|+.++.. -.+..++.+..++.+. ...-+++|++.+ +++.+.-+++-- ++... ++ .+.++...
T Consensus 147 v~GV~ias~~e~~fn~~G~i~a~~s~~~~-al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~--Ll~P~~~~~~~~~~ 223 (316)
T KOG1441|consen 147 VFGVAIASVTELSFNLFGFISAMISNLAF-ALRNILSKKLLTSKGESLNSMNLLYYTAPISLIF--LLIPFLDYVEGNKF 223 (316)
T ss_pred eeeEEEeeeccccccHHHHHHHHHHHHHH-HHHHHHHHHhhhccccccCchHHHHHhhhHHHHH--HhcchHhhhcccce
Confidence 456666522 2345565566665554 455566777774 333343333221 11111 11 11111111
Q ss_pred -----CCCCCchHHHHHHHHHHHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHH
Q 024937 77 -----KQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFG 151 (260)
Q Consensus 77 -----~~~~~P~~~y~~~s~~~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~G 151 (260)
.+...+.......+.+.+..+..+...+..+|=-|+.++--.|-+.+.++|+++ ++++-+..+.+-.++-.+|
T Consensus 224 ~~~~~~~~~~~~~~~~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~i--F~~pvt~~n~~G~~iai~G 301 (316)
T KOG1441|consen 224 VGFLTAPWFVTFLILLLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLI--FGNPVTFLNALGYAIAILG 301 (316)
T ss_pred eeeeccccchhhHHHHHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeee--ecCCCchhhHHHHHHHHHH
Confidence 122222222334456777788888999999999999999999999999999998 7888888999999999999
Q ss_pred HHHhcccCCC
Q 024937 152 LILFTMADAQ 161 (260)
Q Consensus 152 v~lf~~~~~~ 161 (260)
+++....+.+
T Consensus 302 v~~Y~~~k~~ 311 (316)
T KOG1441|consen 302 VFLYSRAKLK 311 (316)
T ss_pred HHHHHHHhhh
Confidence 9887765543
No 64
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=57.69 E-value=87 Score=28.80 Aligned_cols=100 Identities=11% Similarity=0.120 Sum_probs=64.7
Q ss_pred HHHHHHHHHHHHhHHHhhccCchHHH-HHhhccchheeehhhhccccccccCchhhH----HHHHHHHHHHHhcccCCCC
Q 024937 88 KLSAVLMGSHGLTKGSLAFLNYPAQI-MFKSTKVLPVMIMGAFIPGLRRKYPAHEYV----AALLLVFGLILFTMADAQT 162 (260)
Q Consensus 88 ~~s~~~~~~~~~~N~AL~yIs~P~~i-l~KS~klipvMl~g~~l~g~~krY~~~~~~----~v~lit~Gv~lf~~~~~~~ 162 (260)
..+.........+..|++++.++.-+ +-=..-++-+-++|+++ +++--+..+++ +++++.+|+++.++.|+++
T Consensus 50 lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~--fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~ 127 (269)
T PF06800_consen 50 LSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLF--FGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKS 127 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhh--cCCCCCcchHHHHHHHHHHHHHHHHHhccccccc
Confidence 44566677777888888884432100 01122344556788887 66766666554 8889999999999988765
Q ss_pred CC----ChhHHHHHHHHHHHHHHHhHHHHHH
Q 024937 163 SP----NFSLIGVLMISGALVMDSFLGNLQE 189 (260)
Q Consensus 163 ~~----~~~~~G~~ll~~sL~~dg~~~~~qe 189 (260)
+. .+...|+..++.+-+.-.......+
T Consensus 128 ~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~ 158 (269)
T PF06800_consen 128 DKSSSKSNMKKGILALLISTIGYWIYSVIPK 158 (269)
T ss_pred cccccccchhhHHHHHHHHHHHHHHHHHHHH
Confidence 42 2345688877777766666665544
No 65
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=50.54 E-value=7.4 Score=36.12 Aligned_cols=38 Identities=18% Similarity=0.329 Sum_probs=33.6
Q ss_pred chheeehhhhccccccccCchhhHHHHHHHHHHHHhcccC
Q 024937 120 VLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMAD 159 (260)
Q Consensus 120 lipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~ 159 (260)
|+.++++|.++ +|+|-++.|+++|.+-++||..-++..
T Consensus 109 PL~~VllG~lf--lkErls~~Q~iAV~lA~~GV~~~~~~~ 146 (293)
T COG2962 109 PLVNVLLGRLF--LKERLSRLQWIAVGLAAAGVLIQTWLL 146 (293)
T ss_pred HHHHHHHHHHH--HHhhccHHHHHHHHHHHHHHHHHHHHc
Confidence 56778899999 899999999999999999999877644
No 66
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=45.42 E-value=23 Score=26.80 Aligned_cols=58 Identities=12% Similarity=0.136 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHhHHHhhccCchHH-HHHhhccchheeehhhhccccccccCchhhHHHHHH
Q 024937 89 LSAVLMGSHGLTKGSLAFLNYPAQ-IMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLL 148 (260)
Q Consensus 89 ~s~~~~~~~~~~N~AL~yIs~P~~-il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~li 148 (260)
....+..+..+=..|+++++..+- -+.-....+-+-+.|.++ ++++-+..|++.+.+|
T Consensus 35 ~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~--f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 35 AVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFF--FGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHH--H--------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHH--hCCCCCHHHHhheeeC
Confidence 344666777777789999776553 455667888899999999 7899999999988765
No 67
>PF14150 YesK: YesK-like protein
Probab=43.86 E-value=57 Score=24.62 Aligned_cols=58 Identities=16% Similarity=0.313 Sum_probs=37.0
Q ss_pred cccccCchhhHH-----HHHHHHHHHHhcccCCCCCCChhHHHHHHHHHHHHHHHhHHHHHHHHHh
Q 024937 133 LRRKYPAHEYVA-----ALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVMDSFLGNLQEVIFT 193 (260)
Q Consensus 133 ~~krY~~~~~~~-----v~lit~Gv~lf~~~~~~~~~~~~~~G~~ll~~sL~~dg~~~~~qe~l~~ 193 (260)
.|||||.+++-. ..+++++.+..+.-- -+...-.|+.++....+..+..|..-|+..|
T Consensus 19 lr~r~p~k~~~~il~~ililis~~~v~~S~f~---vGGweGmg~g~~~~~v~ig~~ig~i~~~~i~ 81 (81)
T PF14150_consen 19 LRKRFPKKQPEIILPLILILISLLTVLISIFL---VGGWEGMGLGVIAFFVFIGSIIGYIAHQFIR 81 (81)
T ss_pred HHHhCCCcchhHHHHHHHHHHHHHHHHHHHhe---EcchhhhhHHHHHHHHHHHHHHHHHHHHHhC
Confidence 378888876422 333444444333211 0123457899999999999999999887754
No 68
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=37.22 E-value=1.6e+02 Score=26.33 Aligned_cols=53 Identities=4% Similarity=-0.046 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhH
Q 024937 89 LSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYV 143 (260)
Q Consensus 89 ~s~~~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~ 143 (260)
..+++...-.+-...+||.+=-+...+-|+.++-+.+++.++ ++.+.+..-.+
T Consensus 187 ~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~l--f~~~~s~~f~l 239 (244)
T PF04142_consen 187 VIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLL--FGFPPSLSFLL 239 (244)
T ss_pred HHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH--hCCCCchHHhh
Confidence 445666666777889999888899999999999999999999 66666665443
No 69
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=36.05 E-value=1.3e+02 Score=28.28 Aligned_cols=51 Identities=10% Similarity=0.249 Sum_probs=38.6
Q ss_pred hHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCCCC
Q 024937 110 PAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQT 162 (260)
Q Consensus 110 P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~ 162 (260)
++....--.+-..+.++++++ +-|.++..-.-+-+++..|+.+=++++.++
T Consensus 287 ~~aatvTTaRKavTi~lSfll--FsKPfT~qy~~~gllv~lgI~Ln~ysk~nk 337 (367)
T KOG1582|consen 287 LIAATVTTARKAVTILLSFLL--FSKPFTEQYVWSGLLVVLGIYLNMYSKRNK 337 (367)
T ss_pred hHHHHHHHhHhHHHHHHHHHH--HcCchHHHHhhhhHHHHHHHHhhcccCCCC
Confidence 334444444555677889999 889999888888999999999999887433
No 70
>PF15345 TMEM51: Transmembrane protein 51
Probab=32.72 E-value=71 Score=28.80 Aligned_cols=16 Identities=19% Similarity=0.503 Sum_probs=13.7
Q ss_pred HHHHHHHHHHHHhccc
Q 024937 143 VAALLLVFGLILFTMA 158 (260)
Q Consensus 143 ~~v~lit~Gv~lf~~~ 158 (260)
+-+.|+.+||+|..+.
T Consensus 12 iG~Gml~LGiiM~vW~ 27 (233)
T PF15345_consen 12 IGVGMLALGIIMIVWN 27 (233)
T ss_pred HhHhHHHHhhHheeee
Confidence 5678999999999884
No 71
>PF10028 DUF2270: Predicted integral membrane protein (DUF2270); InterPro: IPR014470 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=29.23 E-value=2.6e+02 Score=24.42 Aligned_cols=64 Identities=11% Similarity=0.111 Sum_probs=41.0
Q ss_pred HHHHHHHHhcccCCCCCCChhHHHHHHHHHHHHHHHhHH-----------HHHHHHHhc--CCCccccccChHHHHh
Q 024937 147 LLVFGLILFTMADAQTSPNFSLIGVLMISGALVMDSFLG-----------NLQEVIFTV--NPDTTQVIKHPLQLAY 210 (260)
Q Consensus 147 lit~Gv~lf~~~~~~~~~~~~~~G~~ll~~sL~~dg~~~-----------~~qe~l~~~--~~~~~~~~~~~~e~lf 210 (260)
.+++++.-+++++++.+.-..++|+.++.+=|.+++-.= .+||..|.. .|++.+...+|+|.+-
T Consensus 27 ~~~aa~lS~afss~~~~h~~lL~~~~l~~~FL~iEARRYR~ydv~R~RvR~lE~~~~A~~L~p~~~~~~~~W~~~La 103 (185)
T PF10028_consen 27 TTTAAILSFAFSSPDAPHYVLLFGMFLVTFFLFIEARRYRFYDVWRARVRWLERNFFAPMLDPSQGVEDPDWREELA 103 (185)
T ss_pred HHHHHHHHhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHhCCCCCCCCccHHHHHH
Confidence 344556667777765555557889999999999998653 445555543 3444455556766543
No 72
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=28.81 E-value=4.5e+02 Score=25.18 Aligned_cols=65 Identities=9% Similarity=0.104 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHh
Q 024937 89 LSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILF 155 (260)
Q Consensus 89 ~s~~~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf 155 (260)
..+.+...-.+-....||-+=-++.-.-|+..+-+.+.++.+ ++.+-+..=.+.+.++...+.+.
T Consensus 256 vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~L--f~~~~t~~F~lG~~lVi~Si~lY 320 (345)
T KOG2234|consen 256 VVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIAL--FDFQLTLYFLLGALLVILSIFLY 320 (345)
T ss_pred HHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH--ccCCchHHHHHHHHHHHHHHHHh
Confidence 345555555566677777665555555566666666666555 33444444333333333333333
No 73
>PF13721 SecD-TM1: SecD export protein N-terminal TM region
Probab=27.73 E-value=47 Score=25.77 Aligned_cols=24 Identities=21% Similarity=0.553 Sum_probs=17.9
Q ss_pred cccCchhhHHHHHHHHHHHHhccc
Q 024937 135 RKYPAHEYVAALLLVFGLILFTMA 158 (260)
Q Consensus 135 krY~~~~~~~v~lit~Gv~lf~~~ 158 (260)
+|||.+||+.++++.+-.++.++.
T Consensus 2 N~yp~WKyllil~vl~~~~lyALP 25 (101)
T PF13721_consen 2 NRYPLWKYLLILVVLLLGALYALP 25 (101)
T ss_pred CCcchHHHHHHHHHHHHHHHHHhh
Confidence 699999999888866555555553
No 74
>KOG3733 consensus Mucolipidin and related proteins (TRML subfamily of transient receptor potential proteins) [Inorganic ion transport and metabolism]
Probab=27.70 E-value=40 Score=33.23 Aligned_cols=47 Identities=21% Similarity=0.308 Sum_probs=32.3
Q ss_pred CCchhHHHHHHHHHHHHHHhHHHHHhhhhhccCCCCcchHHHHHHHHHHH
Q 024937 17 DRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFVQGFVYL 66 (260)
Q Consensus 17 ~~~~~~~l~~~~~gIf~~~~~~g~~qE~i~~~~~~~~~~~ltf~qfl~~~ 66 (260)
.+|+.+++..|++.||.|||--|+.-=.-+ .++| .++=|.+++++..
T Consensus 410 alPkVlRFc~ca~mIYlGy~FCGWIVLGPY-HdKF--rsLntvsECLFSL 456 (566)
T KOG3733|consen 410 ALPKVLRFCCCAAMIYLGYCFCGWIVLGPY-HDKF--RSLNTVSECLFSL 456 (566)
T ss_pred hhHHHHHHHHHHHHHHHHHhheeeEEecch-HHhh--hhHHHHHHHHHHh
Confidence 468899999999999999998886422212 2333 3456777776543
No 75
>COG5062 Uncharacterized membrane protein [Function unknown]
Probab=26.57 E-value=31 Score=33.19 Aligned_cols=69 Identities=13% Similarity=0.136 Sum_probs=40.9
Q ss_pred cccccCchhhHHHHHHHHHHHHhcccCCCC----CCChhH-HHHHHHHHHHHHHHhHHHHHHHHHhcCCCccccccChH
Q 024937 133 LRRKYPAHEYVAALLLVFGLILFTMADAQT----SPNFSL-IGVLMISGALVMDSFLGNLQEVIFTVNPDTTQVIKHPL 206 (260)
Q Consensus 133 ~~krY~~~~~~~v~lit~Gv~lf~~~~~~~----~~~~~~-~G~~ll~~sL~~dg~~~~~qe~l~~~~~~~~~~~~~~~ 206 (260)
+.|||...+-...-++=+||--|.+.+.-. ++...+ -|..++ +=|+.-.+--|..+.+....+||.|||
T Consensus 137 fprRlgKsetwGtsLMDiGVGSFvynsGivs~RaksK~~lkn~lill-----flGflR~f~vk~lnyqvhvrEyGvhwN 210 (429)
T COG5062 137 FPRRLGKSETWGTSLMDIGVGSFVYNSGIVSTRAKSKRKLKNALILL-----FLGFLRYFSVKLLNYQVHVREYGVHWN 210 (429)
T ss_pred chHhhhhhhcccceeeecccceeEeccceeecccCccHHHHhhhHHH-----HHHHHHHHHHHHhccccccHHheeehh
Confidence 678888888888888889999888865421 111111 122222 223333344444444445557999998
No 76
>KOG0411 consensus Uncharacterized membrane protein [Function unknown]
Probab=24.95 E-value=69 Score=31.21 Aligned_cols=74 Identities=19% Similarity=0.190 Sum_probs=56.3
Q ss_pred cccccCchhhHHHHHHHHHHHHhcccCCCC-------CCChhHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCccccccCh
Q 024937 133 LRRKYPAHEYVAALLLVFGLILFTMADAQT-------SPNFSLIGVLMISGALVMDSFLGNLQEVIFTVNPDTTQVIKHP 205 (260)
Q Consensus 133 ~~krY~~~~~~~v~lit~Gv~lf~~~~~~~-------~~~~~~~G~~ll~~sL~~dg~~~~~qe~l~~~~~~~~~~~~~~ 205 (260)
+.|||...+-.-..++=.||-.|.+...-. ++.++..+..-....+++-|+.-..+++..+.+....+||.||
T Consensus 123 f~rr~~Ks~~fG~slMD~GVGsFv~s~g~vs~rar~~~~~~~~k~~~~~~~~ll~LG~lR~f~~k~~~y~~~~~EyGvh~ 202 (405)
T KOG0411|consen 123 FPRRYAKSETFGTSLMDLGVGSFVFSLGIVSFRARTISSKSFIKNVKQSALPLLLLGFLRLFSKKLLDYQVDVTEYGVHL 202 (405)
T ss_pred chhhhhhhhccchHHhhcCceeeEeehhhhhHHhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccchhhcceeh
Confidence 457888888888888888888777754311 1234556666677888889999999999998877778999999
Q ss_pred H
Q 024937 206 L 206 (260)
Q Consensus 206 ~ 206 (260)
|
T Consensus 203 N 203 (405)
T KOG0411|consen 203 N 203 (405)
T ss_pred h
Confidence 8
No 77
>KOG1766 consensus Enhancer of rudimentary [General function prediction only]
Probab=20.14 E-value=1.1e+02 Score=23.95 Aligned_cols=28 Identities=14% Similarity=0.146 Sum_probs=21.6
Q ss_pred HHHHHHHhHHHHHHHHHhcCCCcccccc
Q 024937 176 GALVMDSFLGNLQEVIFTVNPDTTQVIK 203 (260)
Q Consensus 176 ~sL~~dg~~~~~qe~l~~~~~~~~~~~~ 203 (260)
+.-++||+...+.|++.+++|+.+.--.
T Consensus 25 v~e~megiCk~yEe~Lkk~nPs~~~ITY 52 (104)
T KOG1766|consen 25 VTECMEGICKMYEEHLKKKNPSAPPITY 52 (104)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCcce
Confidence 3457899999999999998776654433
Done!