Your job contains 1 sequence.
>024938
MEQNLFEPETGYATEEDASLKQKWSPTSAPTNVPEKDGSFFECNICLDSAQDPVVTLCGH
LYCWPCIYKWLHVQTSSLDADEQQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLG
EVVPSRPHPSALNTSVTSSSTSTRHQTQQLHSDFFQSQAPAFHNPQYFPHHYGSHAALAS
SSLGGMATISFFNPLMGMLGGMTLERIFGGSTTSLFTYPSQSLLVSNNPRIRRQEMELDK
SLNRVSLFLFCCLVLCLLLF
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 024938
(260 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2124004 - symbol:RMA3 "RING membrane-anchor 3"... 449 1.9e-42 1
UNIPROTKB|Q6R567 - symbol:RMA1H1 "E3 ubiquitin-protein li... 431 1.6e-40 1
TAIR|locus:2123663 - symbol:RMA2 "RING membrane-anchor 2"... 262 7.6e-29 2
TAIR|locus:2016437 - symbol:AT1G19310 species:3702 "Arabi... 285 6.6e-28 2
TAIR|locus:2128746 - symbol:RMA1 "RING membrane-anchor 1"... 305 3.5e-27 1
TAIR|locus:2049023 - symbol:AT2G23780 species:3702 "Arabi... 261 2.1e-25 2
TAIR|locus:2037294 - symbol:AT1G74990 species:3702 "Arabi... 259 2.6e-22 1
WB|WBGene00004381 - symbol:rnf-5 species:6239 "Caenorhabd... 250 2.4e-21 1
UNIPROTKB|Q09463 - symbol:rnf-5 "RING finger protein 5" s... 250 2.4e-21 1
TAIR|locus:2095833 - symbol:AT3G58030 species:3702 "Arabi... 248 1.1e-20 1
TAIR|locus:2064584 - symbol:AT2G42030 species:3702 "Arabi... 243 3.7e-20 1
RGD|1564777 - symbol:Rnf185 "ring finger protein 185" spe... 235 9.2e-20 1
DICTYBASE|DDB_G0285333 - symbol:DDB_G0285333 "RING finger... 234 1.2e-19 1
UNIPROTKB|A4IFC2 - symbol:RNF185 "RNF185 protein" species... 234 1.2e-19 1
UNIPROTKB|F1PCX5 - symbol:RNF185 "Uncharacterized protein... 234 1.2e-19 1
UNIPROTKB|Q96GF1 - symbol:RNF185 "E3 ubiquitin-protein li... 234 1.2e-19 1
UNIPROTKB|F2Z4Y3 - symbol:RNF185 "Uncharacterized protein... 234 1.2e-19 1
MGI|MGI:1922078 - symbol:Rnf185 "ring finger protein 185"... 234 1.2e-19 1
UNIPROTKB|Q5ZIR9 - symbol:RNF185 "E3 ubiquitin-protein li... 232 1.9e-19 1
UNIPROTKB|F1N0B8 - symbol:RNF5 "Uncharacterized protein" ... 228 5.1e-19 1
UNIPROTKB|F1NHH0 - symbol:RNF185 "E3 ubiquitin-protein li... 227 6.5e-19 1
UNIPROTKB|E7EM95 - symbol:RNF5 "E3 ubiquitin-protein liga... 227 6.5e-19 1
UNIPROTKB|Q99942 - symbol:RNF5 "E3 ubiquitin-protein liga... 227 6.5e-19 1
UNIPROTKB|A5A8Y3 - symbol:RNF5 "Uncharacterized protein" ... 227 6.5e-19 1
UNIPROTKB|E2QS10 - symbol:RNF5 "Uncharacterized protein" ... 226 8.3e-19 1
UNIPROTKB|E9PN08 - symbol:RNF5 "E3 ubiquitin-protein liga... 226 8.3e-19 1
ZFIN|ZDB-GENE-040426-1977 - symbol:rnf185 "ring finger pr... 226 8.3e-19 1
MGI|MGI:1860076 - symbol:Rnf5 "ring finger protein 5" spe... 220 3.6e-18 1
RGD|1588458 - symbol:Rnf5 "ring finger protein 5, E3 ubiq... 220 3.6e-18 1
FB|FBgn0052847 - symbol:CG32847 species:7227 "Drosophila ... 215 1.2e-17 1
FB|FBgn0052581 - symbol:CG32581 species:7227 "Drosophila ... 210 4.1e-17 1
FB|FBgn0030693 - symbol:CG8974 species:7227 "Drosophila m... 210 4.1e-17 1
TAIR|locus:2050533 - symbol:AT2G44410 species:3702 "Arabi... 203 9.3e-16 1
FB|FBgn0085337 - symbol:CG34308 species:7227 "Drosophila ... 129 2.1e-08 1
ASPGD|ASPL0000031841 - symbol:AN5681 species:162425 "Emer... 144 5.2e-08 1
TAIR|locus:2057780 - symbol:PEX10 "peroxin 10" species:37... 139 2.5e-07 1
DICTYBASE|DDB_G0282693 - symbol:pex10 "peroxisome biogene... 136 5.7e-07 1
ZFIN|ZDB-GENE-030131-3306 - symbol:hltf "helicase-like tr... 139 9.6e-07 1
CGD|CAL0005238 - symbol:orf19.5438 species:5476 "Candida ... 108 5.8e-06 1
FB|FBgn0038125 - symbol:CG8141 species:7227 "Drosophila m... 121 1.4e-05 1
UNIPROTKB|A2AAZ5 - symbol:TRIM39 "E3 ubiquitin-protein li... 104 5.0e-05 1
UNIPROTKB|G4NE71 - symbol:MGG_00145 "Uncharacterized prot... 121 5.2e-05 1
FB|FBgn0035233 - symbol:Pex10 "Peroxin 10" species:7227 "... 117 7.6e-05 1
UNIPROTKB|A2AAZ4 - symbol:TRIM39 "E3 ubiquitin-protein li... 98 7.9e-05 1
UNIPROTKB|A2AE50 - symbol:TRIM26 "Tripartite motif-contai... 98 7.9e-05 1
UNIPROTKB|E9PMW5 - symbol:TRIM3 "Tripartite motif-contain... 98 7.9e-05 1
ASPGD|ASPL0000057529 - symbol:AN10006 species:162425 "Eme... 112 8.1e-05 1
GENEDB_PFALCIPARUM|PF10_0127 - symbol:PF10_0127 "hypothet... 120 8.7e-05 1
UNIPROTKB|Q8IJR5 - symbol:PF10_0127 "Conserved Plasmodium... 120 8.7e-05 1
UNIPROTKB|H0YH05 - symbol:RNF10 "RING finger protein 10" ... 97 0.00010 1
RGD|1309031 - symbol:Hltf "helicase-like transcription fa... 122 0.00012 1
ZFIN|ZDB-GENE-070912-318 - symbol:ftr27 "finTRIM family, ... 107 0.00019 1
TAIR|locus:2024675 - symbol:NLA "nitrogen limitation adap... 114 0.00022 1
ZFIN|ZDB-GENE-080218-19 - symbol:ftr46 "finTRIM family, m... 115 0.00022 1
TAIR|locus:2096264 - symbol:AT3G05250 species:3702 "Arabi... 112 0.00026 1
ZFIN|ZDB-GENE-041001-160 - symbol:si:dkey-183n20.15 "si:d... 110 0.00026 1
MGI|MGI:1196437 - symbol:Hltf "helicase-like transcriptio... 119 0.00026 1
UNIPROTKB|Q9ULV8 - symbol:CBLC "Signal transduction prote... 115 0.00029 1
UNIPROTKB|E5RI62 - symbol:TRIM17 "E3 ubiquitin-protein li... 92 0.00037 1
UNIPROTKB|F1MLM2 - symbol:HLTF "Uncharacterized protein" ... 117 0.00046 1
UNIPROTKB|D6RAH9 - symbol:LNX1 "E3 ubiquitin-protein liga... 91 0.00048 1
UNIPROTKB|H0Y340 - symbol:RFWD2 "E3 ubiquitin-protein lig... 91 0.00048 1
POMBASE|SPCC548.05c - symbol:SPCC548.05c "ubiquitin-prote... 113 0.00049 1
UNIPROTKB|F1RMN8 - symbol:TRIM3 "Uncharacterized protein"... 115 0.00054 1
TAIR|locus:2090827 - symbol:AT3G26730 "AT3G26730" species... 115 0.00057 1
UNIPROTKB|G4ND35 - symbol:MGG_00988 "RING-15 protein" spe... 114 0.00062 1
UNIPROTKB|A2AAZ3 - symbol:TRIM39 "E3 ubiquitin-protein li... 90 0.00063 1
UNIPROTKB|H3BPQ8 - symbol:BFAR "Bifunctional apoptosis re... 90 0.00063 1
UNIPROTKB|H3BRQ5 - symbol:BFAR "Bifunctional apoptosis re... 90 0.00063 1
ZFIN|ZDB-GENE-030131-8303 - symbol:si:ch1073-440b2.1 "si:... 112 0.00068 1
POMBASE|SPBC17A3.10 - symbol:pas4 "peroxisomal ubiquitin-... 109 0.00071 1
UNIPROTKB|H7C5K0 - symbol:HLTF "Helicase-like transcripti... 111 0.00072 1
UNIPROTKB|F1M010 - symbol:Rfwd3 "Protein Rfwd3" species:1... 114 0.00072 1
RGD|1305243 - symbol:Rfwd3 "ring finger and WD repeat dom... 114 0.00074 1
MGI|MGI:2684988 - symbol:Pex10 "peroxisomal biogenesis fa... 109 0.00079 1
RGD|1591776 - symbol:Pex10 "peroxisomal biogenesis factor... 109 0.00079 1
UNIPROTKB|D6RB76 - symbol:LNX1 "E3 ubiquitin-protein liga... 89 0.00081 1
UNIPROTKB|J3QRK3 - symbol:TRIM37 "E3 ubiquitin-protein li... 89 0.00081 1
UNIPROTKB|J3QSH5 - symbol:TRIM37 "E3 ubiquitin-protein li... 89 0.00081 1
POMBASE|SPCC970.10c - symbol:brl2 "ubiquitin-protein liga... 113 0.00081 1
ZFIN|ZDB-GENE-070912-126 - symbol:ftr16 "finTRIM family, ... 112 0.00083 1
UNIPROTKB|F1MK05 - symbol:RNF170 "E3 ubiquitin-protein li... 107 0.00085 1
UNIPROTKB|G3MYU5 - symbol:RFWD3 "Uncharacterized protein"... 113 0.00096 1
UNIPROTKB|F1MAV6 - symbol:RFWD3 "Uncharacterized protein"... 113 0.00097 1
ZFIN|ZDB-GENE-030616-180 - symbol:si:busm1-163l24.4 "si:b... 107 0.00099 1
>TAIR|locus:2124004 [details] [associations]
symbol:RMA3 "RING membrane-anchor 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005783 GO:GO:0016021 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0005789 GO:GO:0046872 GO:GO:0008270 EMBL:AL161571
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 HSSP:P38398 EMBL:AL078467 HOGENOM:HOG000238304
KO:K10666 EMBL:DQ059124 EMBL:BT002429 EMBL:BT006285 IPI:IPI00519289
PIR:T08939 RefSeq:NP_194477.2 UniGene:At.43903
ProteinModelPortal:Q8GUK7 SMR:Q8GUK7 PaxDb:Q8GUK7 PRIDE:Q8GUK7
EnsemblPlants:AT4G27470.1 GeneID:828856 KEGG:ath:AT4G27470
TAIR:At4g27470 eggNOG:NOG290580 InParanoid:Q8GUK7 OMA:FLCCIIL
PhylomeDB:Q8GUK7 ProtClustDB:CLSN2918206 Genevestigator:Q8GUK7
Uniprot:Q8GUK7
Length = 243
Score = 449 (163.1 bits), Expect = 1.9e-42, P = 1.9e-42
Identities = 100/229 (43%), Positives = 129/229 (56%)
Query: 1 MEQNLFEPETGYATEEDASL-KQKWSPTSAPTNVPEKDGSFFECNICLDSAQDPVVTLCG 59
ME N F ++ + KQK + T+APT + F+CNICLD+A DPVVTLCG
Sbjct: 1 MEGNFFIRSDAQRAHDNGFIAKQKPNLTTAPTAGQANESGCFDCNICLDTAHDPVVTLCG 60
Query: 60 HLYCWPCIYKWLHVQTSSLDADEQQQNCPVCKANISVASLVPLYGRGGISSASD--SKKP 117
HL+CWPCIYKWLHVQ SS+ D+ Q NCPVCK+NI++ SLVPLYGRG S +S SKK
Sbjct: 61 HLFCWPCIYKWLHVQLSSVSVDQHQNNCPVCKSNITITSLVPLYGRGMSSPSSTFGSKKQ 120
Query: 118 N-LGEVVPSRPHPSALNXXXXXXXXXXRHQTQQLHSDFFQSQAPAFHNPQYFPXXXXXXX 176
+ L +P RP PSAL + + Q H Q+ +P+FHN QY P
Sbjct: 121 DALSTDIPRRPAPSALRNPITSASSL--NPSLQ-H----QTLSPSFHNHQYSPRGFTTTE 173
Query: 177 XXXXXXXXXMATISFFNPLMGMLGGMTLERIFGGSTTSLFT-YPSQSLL 224
M SF P++GM G + RIFG T ++ Y SQ ++
Sbjct: 174 STDLANAVMM---SFLYPVIGMFGDLVYTRIFGTFTNTIAQPYQSQRMM 219
>UNIPROTKB|Q6R567 [details] [associations]
symbol:RMA1H1 "E3 ubiquitin-protein ligase RMA1H1"
species:4072 "Capsicum annuum" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] [GO:0006970 "response to osmotic stress"
evidence=IEP] [GO:0009409 "response to cold" evidence=IEP]
[GO:0009414 "response to water deprivation" evidence=IEP]
[GO:0009611 "response to wounding" evidence=IEP] [GO:0009723
"response to ethylene stimulus" evidence=IEP] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 GO:GO:0009611
GO:GO:0043161 GO:GO:0009723 GO:GO:0005789 GO:GO:0046872
GO:GO:0009409 GO:GO:0009414 GO:GO:0008270 GO:GO:0006970
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 EMBL:AY513612 ProteinModelPortal:Q6R567
Uniprot:Q6R567
Length = 252
Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
Identities = 94/226 (41%), Positives = 127/226 (56%)
Query: 23 KWSPTSAPTNVPEKDGSFFECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQT-SSLDAD 81
KW S V E F+CNICLD +PV+TLCGHLYCWPCIYKW++ Q+ SS ++D
Sbjct: 23 KWK--SMNDEVEENISGGFDCNICLDCVHEPVITLCGHLYCWPCIYKWIYFQSVSSENSD 80
Query: 82 EQQQNCPVCKANISVASLVPLYGRGGISSA-SDSKKPNLGEVVPSRPHPSALNXXXXXXX 140
+QQ CPVCKA +S +L+PLYGRGG S+ S+ K PNLG V+P RP PS
Sbjct: 81 QQQPQCPVCKAEVSEKTLIPLYGRGGQSTKPSEGKAPNLGIVIPQRP-PSPRCGGHFLLP 139
Query: 141 XXXRHQTQQLHSDFFQSQAPAFHNPQYFPXXXXXXXXXXXXXXXXMATISFFNPLMGMLG 200
+ +Q L +Q Q+ P Y M S M+G
Sbjct: 140 TTDSNPSQLLQRRGYQQQSQT-RQPAYQGSYMSSPMLSPGGATANMLQHS-------MIG 191
Query: 201 GMTLERIFGGSTTSLFTYP-SQSLLVSNNPRIRRQEMELDKSLNRV 245
+ RIFG S+T+++TYP S +L +S++PR+RRQ + D+SL R+
Sbjct: 192 EVAYARIFGNSSTTMYTYPNSYNLAISSSPRMRRQLSQADRSLGRI 237
>TAIR|locus:2123663 [details] [associations]
symbol:RMA2 "RING membrane-anchor 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005783 GO:GO:0016021
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0005789 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL161572
GO:GO:0004842 InterPro:IPR017907 HOGENOM:HOG000238304 KO:K10666
EMBL:U81598 EMBL:BT003053 EMBL:AK227310 IPI:IPI00535055 PIR:T09043
RefSeq:NP_194556.1 UniGene:At.32032 HSSP:P15919
ProteinModelPortal:P93030 SMR:P93030 IntAct:P93030 STRING:P93030
EnsemblPlants:AT4G28270.1 GeneID:828942 KEGG:ath:AT4G28270
TAIR:At4g28270 eggNOG:KOG0823 InParanoid:P93030 OMA:GESSSNM
PhylomeDB:P93030 ProtClustDB:PLN03208 Genevestigator:P93030
Uniprot:P93030
Length = 193
Score = 262 (97.3 bits), Expect = 7.6e-29, Sum P(2) = 7.6e-29
Identities = 50/96 (52%), Positives = 65/96 (67%)
Query: 38 GSFFECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSS---LDA-DEQQQ--NCPVCK 91
G F+CNICLD +DPVVTLCGHL+CWPCI+KW + +S +D D +++ CPVCK
Sbjct: 16 GGDFDCNICLDQVRDPVVTLCGHLFCWPCIHKWTYASNNSRQRVDQYDHKREPPKCPVCK 75
Query: 92 ANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 127
+++S A+LVP+YGRG K P G VPSRP
Sbjct: 76 SDVSEATLVPIYGRG-------QKAPQSGSNVPSRP 104
Score = 74 (31.1 bits), Expect = 7.6e-29, Sum P(2) = 7.6e-29
Identities = 18/53 (33%), Positives = 32/53 (60%)
Query: 193 NPLMGMLGGMTLERIFGGSTTSLFTYPSQSLLVSNNPRIRRQEMELDKSLNRV 245
+P+MG++ M R+FG S++++ Y N R RR+ M+ ++SL+RV
Sbjct: 132 DPVMGVVCEMVYRRLFGESSSNMAPYRDM------NVRSRRRAMQAEESLSRV 178
>TAIR|locus:2016437 [details] [associations]
symbol:AT1G19310 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HSSP:P38398 EMBL:AC025808 HOGENOM:HOG000238304
KO:K10666 eggNOG:NOG300581 EMBL:AY057705 EMBL:AY116959
EMBL:AY085230 IPI:IPI00544945 PIR:E86326 RefSeq:NP_564078.1
UniGene:At.16708 ProteinModelPortal:Q9LN67 SMR:Q9LN67 IntAct:Q9LN67
EnsemblPlants:AT1G19310.1 GeneID:838513 KEGG:ath:AT1G19310
TAIR:At1g19310 InParanoid:Q9LN67 OMA:NANPWFM PhylomeDB:Q9LN67
ProtClustDB:CLSN2917022 Genevestigator:Q9LN67 Uniprot:Q9LN67
Length = 226
Score = 285 (105.4 bits), Expect = 6.6e-28, Sum P(2) = 6.6e-28
Identities = 57/100 (57%), Positives = 65/100 (65%)
Query: 28 SAPTNVPEKDGSFFECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNC 87
S+ + D S FECNICLD AQDP+VTLCGHL+CWPC+YKWLH+ + S D C
Sbjct: 8 SSGNDTNNNDSSNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHLHSQSKD-------C 60
Query: 88 PVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 127
PVCKA I LVPLYGRG SSA K G VP+RP
Sbjct: 61 PVCKAVIEEDRLVPLYGRGK-SSADPRSKSIPGLEVPNRP 99
Score = 42 (19.8 bits), Expect = 6.6e-28, Sum P(2) = 6.6e-28
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 200 GGMTLERIFGGSTTSLF 216
G +TL FGG SLF
Sbjct: 139 GNVTLSAAFGGLIPSLF 155
>TAIR|locus:2128746 [details] [associations]
symbol:RMA1 "RING membrane-anchor 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0005783 "endoplasmic reticulum" evidence=IDA] [GO:0032527
"protein exit from endoplasmic reticulum" evidence=IMP] [GO:0016020
"membrane" evidence=IDA] [GO:0032940 "secretion by cell"
evidence=IGI] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005783 GO:GO:0016021
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0032940 GO:GO:0016020
GO:GO:0005789 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004842 InterPro:IPR017907
HSSP:P38398 EMBL:AF071527 EMBL:AL161497 GO:GO:0032527 EMBL:AB008518
EMBL:BT003833 EMBL:BT005188 IPI:IPI00517108 PIR:T52142
RefSeq:NP_192260.1 RefSeq:NP_974506.1 UniGene:At.239
ProteinModelPortal:O64425 SMR:O64425 IntAct:O64425 STRING:O64425
PRIDE:O64425 EnsemblPlants:AT4G03510.1 EnsemblPlants:AT4G03510.2
GeneID:825654 KEGG:ath:AT4G03510 TAIR:At4g03510 eggNOG:NOG283810
HOGENOM:HOG000238304 InParanoid:O64425 KO:K10666 OMA:CKSKVSH
PhylomeDB:O64425 ProtClustDB:CLSN2685946 Genevestigator:O64425
Uniprot:O64425
Length = 249
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 80/232 (34%), Positives = 116/232 (50%)
Query: 21 KQKWSPTSAPTNVP--EKDGSFFECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQT-SS 77
K K P +VP + D S F+CNICLDS Q+PVVTLCGHL+CWPCI+KWL VQ+ S+
Sbjct: 25 KSK-KPEPITVSVPSDDTDDSNFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFST 83
Query: 78 LDADEQQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNXXXX 137
D ++ + CPVCK+ +S ++LVPLYGRG ++ + K VP RP
Sbjct: 84 SDEYQRHRQCPVCKSKVSHSTLVPLYGRGRCTTQEEGKNS-----VPKRPVGPVYRLEMP 138
Query: 138 XXXXXXRHQTQQLHSDFFQSQAPAFHNPQ--YFPXXXXXXXXXXXXXXXXMATISFFNPL 195
+ +D SQ F++PQ Y+P + +
Sbjct: 139 --------NSPYASTDLRLSQRVHFNSPQEGYYPVSGVMSSNSLSYSAVLDPVMVMVGEM 190
Query: 196 MG--MLGGMTLERIFGGSTTSLFTYPSQSLLVSNNPRIRRQEMELDKSLNRV 245
+ + G ++R F T Y +L ++ PR+RR+ M+ DKSL R+
Sbjct: 191 VATRLFGTRVMDR-FAYPDT----Y---NLAGTSGPRMRRRIMQADKSLGRI 234
>TAIR|locus:2049023 [details] [associations]
symbol:AT2G23780 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0006661 "phosphatidylinositol biosynthetic
process" evidence=RCA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:AC004482 HOGENOM:HOG000238304 KO:K10666 eggNOG:NOG300581
HSSP:P22681 EMBL:BT008560 EMBL:BT008701 EMBL:AK229514
IPI:IPI00539367 PIR:T02413 RefSeq:NP_179958.1 UniGene:At.12626
ProteinModelPortal:O64824 SMR:O64824 EnsemblPlants:AT2G23780.1
GeneID:816910 KEGG:ath:AT2G23780 TAIR:At2g23780 InParanoid:O64824
OMA:VNGESST PhylomeDB:O64824 ProtClustDB:CLSN2912869
ArrayExpress:O64824 Genevestigator:O64824 Uniprot:O64824
Length = 227
Score = 261 (96.9 bits), Expect = 2.1e-25, Sum P(2) = 2.1e-25
Identities = 53/112 (47%), Positives = 69/112 (61%)
Query: 17 DASLKQKWSPTSAPTNVPEKDGSFFECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTS 76
++S +S ++ TN G FECNIC + AQDP+VTLCGHL+CWPC+Y+WLH +
Sbjct: 5 ESSTSTSYSDSNNDTN---DQGGDFECNICFELAQDPIVTLCGHLFCWPCLYRWLHHHSH 61
Query: 77 SLDADEQQQNCPVCKANISVASLVPLYGRGGISSASDSKK-PNLGEVVPSRP 127
S Q CPVCKA + LVPLYGRG + SK+ P L +P+RP
Sbjct: 62 S-------QECPVCKAVVQDDKLVPLYGRGKNQTDPRSKRYPGLR--IPNRP 104
Score = 42 (19.8 bits), Expect = 2.1e-25, Sum P(2) = 2.1e-25
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 187 ATISFFNPLMGMLGG----MTLERI------FGGSTTSLFTY 218
A +FFN +G++GG M R FGG SLF +
Sbjct: 120 AASNFFNYGIGLMGGIMPMMATTRFGNFSMGFGGLLPSLFNF 161
>TAIR|locus:2037294 [details] [associations]
symbol:AT1G74990 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC008263 EMBL:AC013258
InterPro:IPR017907 HOGENOM:HOG000238304 EMBL:AY088830 EMBL:BT030642
IPI:IPI00531818 PIR:G96779 RefSeq:NP_177636.1 UniGene:At.34824
ProteinModelPortal:Q9S7D6 SMR:Q9S7D6 EnsemblPlants:AT1G74990.1
GeneID:843837 KEGG:ath:AT1G74990 TAIR:At1g74990 eggNOG:NOG241331
InParanoid:Q9S7D6 OMA:GCNICLE PhylomeDB:Q9S7D6
ProtClustDB:CLSN2914219 Genevestigator:Q9S7D6 Uniprot:Q9S7D6
Length = 137
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 56/127 (44%), Positives = 70/127 (55%)
Query: 31 TNVPEKDGSFFECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNCPVC 90
TN + + F CNICL+ A++P+VTLCGHL+CWPC+YKWLH + S +CPVC
Sbjct: 7 TNEEDDASNNFGCNICLELAREPIVTLCGHLFCWPCLYKWLHYHSKS-------NHCPVC 59
Query: 91 KANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSALNXXXXXXXXXXRHQTQQL 150
KA + +LVPLYG G SS SK N G VP+RP +A RH
Sbjct: 60 KALVKEDTLVPLYGMGKPSSDPRSKL-NSGVTVPNRP--AATRTETARPRLEQRHHGSSF 116
Query: 151 ---HSDF 154
HS F
Sbjct: 117 FGGHSSF 123
>WB|WBGene00004381 [details] [associations]
symbol:rnf-5 species:6239 "Caenorhabditis elegans"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005680
"anaphase-promoting complex" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0055120 "striated muscle dense body" evidence=IDA] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IDA] [GO:0055002 "striated muscle cell
development" evidence=IMP] [GO:0030054 "cell junction"
evidence=IDA] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0005634
GO:GO:0008340 GO:GO:0046872 GO:GO:0030054 GO:GO:0018996
GO:GO:0055120 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 GO:GO:0042787 EMBL:Z46787
GO:GO:0055002 HOGENOM:HOG000238304 KO:K10666 eggNOG:NOG300581
GeneTree:ENSGT00390000014107 PIR:T19328 RefSeq:NP_497830.1
ProteinModelPortal:Q09463 SMR:Q09463 IntAct:Q09463 STRING:Q09463
PaxDb:Q09463 EnsemblMetazoa:C16C10.7 GeneID:175532
KEGG:cel:CELE_C16C10.7 UCSC:C16C10.7 CTD:175532 WormBase:C16C10.7
InParanoid:Q09463 OMA:CNICLDA NextBio:888552 Uniprot:Q09463
Length = 235
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 51/108 (47%), Positives = 65/108 (60%)
Query: 25 SPTSAPTNVPEKDGSF-FECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQ 83
+P+ PT+ KD S FECNICLD+A+D VV+LCGHL+CWPC+ +WL D
Sbjct: 7 APSEEPTSSSNKDESARFECNICLDAAKDAVVSLCGHLFCWPCLSQWL-------DTRPN 59
Query: 84 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSA 131
Q CPVCK+ I +VP+YGRGG SS K P + S P P +
Sbjct: 60 NQVCPVCKSAIDGNKVVPIYGRGGDSSDPRKKVPPRPKGQRSEPPPQS 107
>UNIPROTKB|Q09463 [details] [associations]
symbol:rnf-5 "RING finger protein 5" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0005634 GO:GO:0008340 GO:GO:0046872
GO:GO:0030054 GO:GO:0018996 GO:GO:0055120 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0042787 EMBL:Z46787 GO:GO:0055002
HOGENOM:HOG000238304 KO:K10666 eggNOG:NOG300581
GeneTree:ENSGT00390000014107 PIR:T19328 RefSeq:NP_497830.1
ProteinModelPortal:Q09463 SMR:Q09463 IntAct:Q09463 STRING:Q09463
PaxDb:Q09463 EnsemblMetazoa:C16C10.7 GeneID:175532
KEGG:cel:CELE_C16C10.7 UCSC:C16C10.7 CTD:175532 WormBase:C16C10.7
InParanoid:Q09463 OMA:CNICLDA NextBio:888552 Uniprot:Q09463
Length = 235
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 51/108 (47%), Positives = 65/108 (60%)
Query: 25 SPTSAPTNVPEKDGSF-FECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQ 83
+P+ PT+ KD S FECNICLD+A+D VV+LCGHL+CWPC+ +WL D
Sbjct: 7 APSEEPTSSSNKDESARFECNICLDAAKDAVVSLCGHLFCWPCLSQWL-------DTRPN 59
Query: 84 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSA 131
Q CPVCK+ I +VP+YGRGG SS K P + S P P +
Sbjct: 60 NQVCPVCKSAIDGNKVVPIYGRGGDSSDPRKKVPPRPKGQRSEPPPQS 107
>TAIR|locus:2095833 [details] [associations]
symbol:AT3G58030 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 KO:K10666 HOGENOM:HOG000090666
ProtClustDB:CLSN2683808 EMBL:AY081289 EMBL:BT006585 IPI:IPI00546255
RefSeq:NP_001190122.1 RefSeq:NP_191362.2 RefSeq:NP_974453.1
RefSeq:NP_974454.1 UniGene:At.34773 ProteinModelPortal:Q8RXF2
SMR:Q8RXF2 EnsemblPlants:AT3G58030.1 EnsemblPlants:AT3G58030.2
EnsemblPlants:AT3G58030.3 EnsemblPlants:AT3G58030.4 GeneID:824972
KEGG:ath:AT3G58030 TAIR:At3g58030 eggNOG:NOG244906
InParanoid:Q8RXF2 OMA:HARRIES PhylomeDB:Q8RXF2
Genevestigator:Q8RXF2 Uniprot:Q8RXF2
Length = 436
Score = 248 (92.4 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 44/92 (47%), Positives = 60/92 (65%)
Query: 37 DGSFFECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNCPVCKANISV 96
DG+FF+CNICLD +++PV+T CGHLYCWPC+Y+WL + DA E CPVCK ++
Sbjct: 133 DGNFFDCNICLDLSKEPVLTCCGHLYCWPCLYQWLQIS----DAKE----CPVCKGEVTS 184
Query: 97 ASLVPLYGRGGISSASDSKKPNLGEVVPSRPH 128
++ P+YGRG + +L VP RPH
Sbjct: 185 KTVTPIYGRGNHKREIEE---SLDTKVPMRPH 213
>TAIR|locus:2064584 [details] [associations]
symbol:AT2G42030 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0046872 GO:GO:0008270 EMBL:U90439 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 HSSP:P15919 EMBL:AY058184
EMBL:AY072117 EMBL:AY096666 IPI:IPI00537204 PIR:A84849
RefSeq:NP_181733.1 UniGene:At.20315 UniGene:At.74233
ProteinModelPortal:P93744 SMR:P93744 EnsemblPlants:AT2G42030.1
GeneID:818803 KEGG:ath:AT2G42030 TAIR:At2g42030 eggNOG:NOG251015
HOGENOM:HOG000090666 InParanoid:P93744 OMA:SEAKECP PhylomeDB:P93744
ProtClustDB:CLSN2683808 ArrayExpress:P93744 Genevestigator:P93744
Uniprot:P93744
Length = 425
Score = 243 (90.6 bits), Expect = 3.7e-20, P = 3.7e-20
Identities = 47/91 (51%), Positives = 59/91 (64%)
Query: 37 DGSFFECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNCPVCKANISV 96
DGSFF+C ICLD ++DPVVT CGHLYCW C+Y+WL V +A E CPVCK +SV
Sbjct: 135 DGSFFDCYICLDLSKDPVVTNCGHLYCWSCLYQWLQVS----EAKE----CPVCKGEVSV 186
Query: 97 ASLVPLYGRGGISSASDSKKPNLGEVVPSRP 127
++ P+YGRG I + N +PSRP
Sbjct: 187 KTVTPIYGRG-IQKRESEEVSNTK--IPSRP 214
>RGD|1564777 [details] [associations]
symbol:Rnf185 "ring finger protein 185" species:10116 "Rattus
norvegicus" [GO:0005741 "mitochondrial outer membrane"
evidence=IEA] [GO:0006914 "autophagy" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 RGD:1564777
Prosite:PS00518 GO:GO:0016021 GO:GO:0005741 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 GO:GO:0006914 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
HOGENOM:HOG000238304 KO:K10666 CTD:91445 eggNOG:NOG300581
GeneTree:ENSGT00390000014107 HOVERGEN:HBG054495 OMA:LSKVFLW
OrthoDB:EOG4R7VC8 EMBL:BC092655 IPI:IPI00195276
RefSeq:NP_001019442.1 UniGene:Rn.7234 ProteinModelPortal:Q568Y3
PhosphoSite:Q568Y3 Ensembl:ENSRNOT00000026134 GeneID:360967
KEGG:rno:360967 UCSC:RGD:1564777 InParanoid:Q568Y3 NextBio:674743
Genevestigator:Q568Y3 GermOnline:ENSRNOG00000019325 Uniprot:Q568Y3
Length = 192
Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 48/124 (38%), Positives = 69/124 (55%)
Query: 8 PETGYATEEDASLKQKWSPTSAPTNVPEKDG--SFFECNICLDSAQDPVVTLCGHLYCWP 65
P +TE ++ P+ + E G S FECNICLD+A+D V++LCGHL+CWP
Sbjct: 6 PSASASTENSSA----GGPSGSSNGTGESGGQDSTFECNICLDTAKDAVISLCGHLFCWP 61
Query: 66 CIYKWLHVQTSSLDADEQQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPS 125
C+++WL + + +Q CPVCKA IS ++PLYGRG + D ++
Sbjct: 62 CLHQWLETRPN-------RQVCPVCKAGISRDKVIPLYGRGS-TGQQDPREKTPPRPQGQ 113
Query: 126 RPHP 129
RP P
Sbjct: 114 RPEP 117
>DICTYBASE|DDB_G0285333 [details] [associations]
symbol:DDB_G0285333 "RING finger protein 185"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
dictyBase:DDB_G0285333 Prosite:PS00518 GO:GO:0046872
EMBL:AAFI02000079 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 eggNOG:COG5574 KO:K10666
RefSeq:XP_638242.1 ProteinModelPortal:Q54ND8
EnsemblProtists:DDB0186444 GeneID:8625050 KEGG:ddi:DDB_G0285333
InParanoid:Q54ND8 OMA:CIFQWLQ Uniprot:Q54ND8
Length = 281
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 48/118 (40%), Positives = 66/118 (55%)
Query: 10 TGYATEEDASLKQKWSPTSAPTNVPEKDGSFFECNICLDSAQDPVVTLCGHLYCWPCIYK 69
T + D S ++ S + ++ S FECNIC D +PVVT CGHL+CW CI++
Sbjct: 42 TSSSNNNDGS--EQSSSSQQQQQQQQQQSSPFECNICFDDVSEPVVTQCGHLFCWTCIFQ 99
Query: 70 WLHVQTSSLDADEQQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 127
WL +S Q CPVCKA I+ L+P+YGRGG S D +K + + +P RP
Sbjct: 100 WLQHNSS--------QQCPVCKAPITKEKLIPIYGRGG--SGEDPRKKS--QSIPQRP 145
>UNIPROTKB|A4IFC2 [details] [associations]
symbol:RNF185 "RNF185 protein" species:9913 "Bos taurus"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000238304 KO:K10666 CTD:91445
eggNOG:NOG300581 GeneTree:ENSGT00390000014107 HOVERGEN:HBG054495
OMA:LSKVFLW OrthoDB:EOG4R7VC8 EMBL:DAAA02045640 EMBL:BC134508
IPI:IPI00689680 RefSeq:NP_001077172.1 UniGene:Bt.26786
Ensembl:ENSBTAT00000003661 GeneID:524459 KEGG:bta:524459
InParanoid:A4IFC2 NextBio:20873969 Uniprot:A4IFC2
Length = 192
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 45/106 (42%), Positives = 63/106 (59%)
Query: 26 PTSAPTNVPEKDG--SFFECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQ 83
P+ + E G S FECNICLD+A+D V++LCGHL+CWPC+++WL + +
Sbjct: 20 PSGSSNGAGESGGQDSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPN------- 72
Query: 84 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHP 129
+Q CPVCKA IS ++PLYGRG + D ++ RP P
Sbjct: 73 RQVCPVCKAGISRDKVIPLYGRGS-TGQQDPREKTPPRPQGQRPEP 117
>UNIPROTKB|F1PCX5 [details] [associations]
symbol:RNF185 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 KO:K10666 CTD:91445 GeneTree:ENSGT00390000014107
OMA:LSKVFLW EMBL:AAEX03014800 RefSeq:XP_852634.1
ProteinModelPortal:F1PCX5 Ensembl:ENSCAFT00000020620 GeneID:486362
KEGG:cfa:486362 Uniprot:F1PCX5
Length = 192
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 45/106 (42%), Positives = 63/106 (59%)
Query: 26 PTSAPTNVPEKDG--SFFECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQ 83
P+ + E G S FECNICLD+A+D V++LCGHL+CWPC+++WL + +
Sbjct: 20 PSGSSNGAGESGGQDSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPN------- 72
Query: 84 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHP 129
+Q CPVCKA IS ++PLYGRG + D ++ RP P
Sbjct: 73 RQVCPVCKAGISRDKVIPLYGRGS-TGQQDPREKTPPRPQGQRPEP 117
>UNIPROTKB|Q96GF1 [details] [associations]
symbol:RNF185 "E3 ubiquitin-protein ligase RNF185"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006914 "autophagy" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0005741 "mitochondrial outer membrane"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 GO:GO:0005741
GO:GO:0046872 GO:GO:0016874 EMBL:CH471095 GO:GO:0008270
GO:GO:0006914 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AC002073 EMBL:AC005005 HOGENOM:HOG000238304
KO:K10666 CTD:91445 eggNOG:NOG300581 HOVERGEN:HBG054495 OMA:LSKVFLW
OrthoDB:EOG4R7VC8 EMBL:DQ296559 EMBL:DQ296561 EMBL:DQ296562
EMBL:DQ296565 EMBL:CR456349 EMBL:AK095947 EMBL:AK291236
EMBL:BC009504 EMBL:BC026040 EMBL:BC033166 EMBL:BC012817
EMBL:BC035684 IPI:IPI00182628 IPI:IPI00435433 RefSeq:NP_001129297.1
RefSeq:NP_689480.2 UniGene:Hs.517553 ProteinModelPortal:Q96GF1
SMR:Q96GF1 IntAct:Q96GF1 PhosphoSite:Q96GF1 DMDM:74751883
PRIDE:Q96GF1 DNASU:91445 Ensembl:ENST00000266252
Ensembl:ENST00000326132 Ensembl:ENST00000518626 GeneID:91445
KEGG:hsa:91445 UCSC:uc003akb.3 GeneCards:GC22P031556
HGNC:HGNC:26783 HPA:HPA048329 neXtProt:NX_Q96GF1
PharmGKB:PA142671056 InParanoid:Q96GF1 PhylomeDB:Q96GF1
ChiTaRS:RNF185 GenomeRNAi:91445 NextBio:77254 ArrayExpress:Q96GF1
Bgee:Q96GF1 CleanEx:HS_RNF185 Genevestigator:Q96GF1
GermOnline:ENSG00000138942 Uniprot:Q96GF1
Length = 192
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 45/106 (42%), Positives = 63/106 (59%)
Query: 26 PTSAPTNVPEKDG--SFFECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQ 83
P+ + E G S FECNICLD+A+D V++LCGHL+CWPC+++WL + +
Sbjct: 20 PSGSSNGAGESGGQDSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPN------- 72
Query: 84 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHP 129
+Q CPVCKA IS ++PLYGRG + D ++ RP P
Sbjct: 73 RQVCPVCKAGISRDKVIPLYGRGS-TGQQDPREKTPPRPQGQRPEP 117
>UNIPROTKB|F2Z4Y3 [details] [associations]
symbol:RNF185 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 KO:K10666 CTD:91445 GeneTree:ENSGT00390000014107
OMA:LSKVFLW EMBL:CT573044 RefSeq:XP_001925859.1 UniGene:Ssc.80754
ProteinModelPortal:F2Z4Y3 SMR:F2Z4Y3 Ensembl:ENSSSCT00000010981
GeneID:100157569 KEGG:ssc:100157569 Uniprot:F2Z4Y3
Length = 192
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 45/106 (42%), Positives = 63/106 (59%)
Query: 26 PTSAPTNVPEKDG--SFFECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQ 83
P+ + E G S FECNICLD+A+D V++LCGHL+CWPC+++WL + +
Sbjct: 20 PSGSSNGAGESGGQDSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPN------- 72
Query: 84 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHP 129
+Q CPVCKA IS ++PLYGRG + D ++ RP P
Sbjct: 73 RQVCPVCKAGISRDKVIPLYGRGS-TGQQDPREKTPPRPQGQRPEP 117
>MGI|MGI:1922078 [details] [associations]
symbol:Rnf185 "ring finger protein 185" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005741 "mitochondrial outer membrane"
evidence=IEA] [GO:0006914 "autophagy" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 MGI:MGI:1922078 Prosite:PS00518 GO:GO:0016021
GO:GO:0005741 GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
GO:GO:0006914 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000238304 KO:K10666 CTD:91445
eggNOG:NOG300581 GeneTree:ENSGT00390000014107 HOVERGEN:HBG054495
OrthoDB:EOG4R7VC8 ChiTaRS:RNF185 EMBL:AK034108 EMBL:AK052436
EMBL:AK053358 EMBL:AK075756 EMBL:AK077638 EMBL:AK149640
EMBL:AK165895 EMBL:AK167455 EMBL:AK168904 EMBL:BC014812
IPI:IPI00329937 IPI:IPI00453942 RefSeq:NP_663330.2
UniGene:Mm.136973 ProteinModelPortal:Q91YT2 SMR:Q91YT2
PhosphoSite:Q91YT2 PRIDE:Q91YT2 Ensembl:ENSMUST00000064364
Ensembl:ENSMUST00000077078 GeneID:193670 KEGG:mmu:193670
UCSC:uc007hsv.1 InParanoid:Q91YT2 OMA:WIALIFM NextBio:371498
Bgee:Q91YT2 CleanEx:MM_RNF185 Genevestigator:Q91YT2
GermOnline:ENSMUSG00000020448 Uniprot:Q91YT2
Length = 192
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 45/106 (42%), Positives = 63/106 (59%)
Query: 26 PTSAPTNVPEKDG--SFFECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQ 83
P+ + E G S FECNICLD+A+D V++LCGHL+CWPC+++WL + +
Sbjct: 20 PSGSSNGTGESGGQDSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPN------- 72
Query: 84 QQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHP 129
+Q CPVCKA IS ++PLYGRG + D ++ RP P
Sbjct: 73 RQVCPVCKAGISRDKVIPLYGRGS-TGQQDPREKTPPRPQGQRPEP 117
>UNIPROTKB|Q5ZIR9 [details] [associations]
symbol:RNF185 "E3 ubiquitin-protein ligase RNF185"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006914 "autophagy" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005741 "mitochondrial outer membrane" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 GO:GO:0005741
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0006914
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000238304 KO:K10666 EMBL:AJ720715
IPI:IPI00586277 RefSeq:NP_001007841.1 UniGene:Gga.4866
ProteinModelPortal:Q5ZIR9 Ensembl:ENSGALT00000011276 GeneID:416965
KEGG:gga:416965 CTD:91445 eggNOG:NOG300581
GeneTree:ENSGT00390000014107 HOVERGEN:HBG054495 InParanoid:Q5ZIR9
OMA:LSKVFLW OrthoDB:EOG4R7VC8 NextBio:20820352 ArrayExpress:Q5ZIR9
Uniprot:Q5ZIR9
Length = 194
Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 46/122 (37%), Positives = 68/122 (55%)
Query: 8 PETGYATEEDASLKQKWSPTSAPTNVPEKDGSFFECNICLDSAQDPVVTLCGHLYCWPCI 67
P T +T+ ++ S +S + FECNICLD+A+D V++LCGHL+CWPC+
Sbjct: 6 PTTSASTKSSSTGGTSGSSSSNGAGDNTNQDNTFECNICLDTAKDAVISLCGHLFCWPCL 65
Query: 68 YKWLHVQTSSLDADEQQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 127
++WL + + +Q CPVCKA IS ++PLYGRG + D ++ RP
Sbjct: 66 HQWLETRPN-------RQVCPVCKAGISRDKVIPLYGRGS-TGQQDPREKTPPRPQGQRP 117
Query: 128 HP 129
P
Sbjct: 118 EP 119
>UNIPROTKB|F1N0B8 [details] [associations]
symbol:RNF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071712 "ER-associated misfolded protein catabolic
process" evidence=IEA] [GO:0070936 "protein K48-linked
ubiquitination" evidence=IEA] [GO:0070534 "protein K63-linked
ubiquitination" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 GO:GO:0070936
GO:GO:0070534 GO:GO:0071712 GeneTree:ENSGT00390000014107
OMA:FQSFGDT EMBL:DAAA02055357 IPI:IPI00699444 UniGene:Bt.1678
Ensembl:ENSBTAT00000035701 Uniprot:F1N0B8
Length = 180
Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
Identities = 42/94 (44%), Positives = 59/94 (62%)
Query: 38 GSFFECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNCPVCKANISVA 97
G+ FECNICL++A++ VV++CGHLYCWPC+++WL + ++Q CPVCKA IS
Sbjct: 22 GATFECNICLETAREAVVSVCGHLYCWPCLHQWLETRP-------ERQECPVCKAGISRE 74
Query: 98 SLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSA 131
++VPLYGRG D + RP P +
Sbjct: 75 NVVPLYGRGS-QKPQDPRLKTPPRPQGQRPAPES 107
>UNIPROTKB|F1NHH0 [details] [associations]
symbol:RNF185 "E3 ubiquitin-protein ligase RNF185"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00390000014107
EMBL:AADN02043215 EMBL:AADN02043216 IPI:IPI00590225
Ensembl:ENSGALT00000011275 ArrayExpress:F1NHH0 Uniprot:F1NHH0
Length = 117
Score = 227 (85.0 bits), Expect = 6.5e-19, P = 6.5e-19
Identities = 41/89 (46%), Positives = 57/89 (64%)
Query: 41 FECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNCPVCKANISVASLV 100
FECNICLD+A+D V++LCGHL+CWPC+++WL + + +Q CPVCKA IS ++
Sbjct: 2 FECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPN-------RQVCPVCKAGISRDKVI 54
Query: 101 PLYGRGGISSASDSKKPNLGEVVPSRPHP 129
PLYGRG + D ++ RP P
Sbjct: 55 PLYGRGS-TGQQDPREKTPPRPQGQRPEP 82
>UNIPROTKB|E7EM95 [details] [associations]
symbol:RNF5 "E3 ubiquitin-protein ligase RNF5" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL662884 EMBL:AL845464 EMBL:BX284686
EMBL:BX927239 EMBL:CR933878 EMBL:CR812478 EMBL:AL662830
HGNC:HGNC:10068 IPI:IPI00910392 SMR:E7EM95 Ensembl:ENST00000427134
Ensembl:ENST00000547812 Ensembl:ENST00000548239
Ensembl:ENST00000549150 Ensembl:ENST00000549680
Ensembl:ENST00000549803 Ensembl:ENST00000550243 Uniprot:E7EM95
Length = 182
Score = 227 (85.0 bits), Expect = 6.5e-19, P = 6.5e-19
Identities = 42/94 (44%), Positives = 58/94 (61%)
Query: 38 GSFFECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNCPVCKANISVA 97
G+ FECNICL++A++ VV++CGHLYCWPC+++WL + ++Q CPVCKA IS
Sbjct: 22 GATFECNICLETAREAVVSVCGHLYCWPCLHQWLETRP-------ERQECPVCKAGISRE 74
Query: 98 SLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSA 131
+VPLYGRG D + RP P +
Sbjct: 75 KVVPLYGRGS-QKPQDPRLKTPPRPQGQRPAPES 107
>UNIPROTKB|Q99942 [details] [associations]
symbol:RNF5 "E3 ubiquitin-protein ligase RNF5" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0031966
"mitochondrial membrane" evidence=IEA] [GO:0070936 "protein
K48-linked ubiquitination" evidence=IDA] [GO:0044257 "cellular
protein catabolic process" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IMP] [GO:0070534
"protein K63-linked ubiquitination" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
GO:GO:0005789 GO:GO:0031966 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070936 GO:GO:0070534 EMBL:AL662884
GO:GO:0071712 EMBL:U89336 EMBL:AL845464 EMBL:BX284686 EMBL:BX927239
EMBL:CR933878 EMBL:CR812478 EMBL:AL662830 HOGENOM:HOG000238304
KO:K10666 eggNOG:NOG300581 HOVERGEN:HBG054495 EMBL:AB056869
EMBL:AJ243936 EMBL:AK311859 EMBL:BT007105 EMBL:BC004155
EMBL:BC111392 EMBL:BC119741 EMBL:BC119742 EMBL:BC127651
EMBL:BC127652 EMBL:BC148255 IPI:IPI00012608 RefSeq:NP_008844.1
UniGene:Hs.731774 ProteinModelPortal:Q99942 SMR:Q99942
DIP:DIP-29268N IntAct:Q99942 MINT:MINT-1032027 STRING:Q99942
PhosphoSite:Q99942 DMDM:74762702 PRIDE:Q99942 DNASU:6048
Ensembl:ENST00000375094 Ensembl:ENST00000413786
Ensembl:ENST00000432616 Ensembl:ENST00000445885
Ensembl:ENST00000449794 Ensembl:ENST00000453473
Ensembl:ENST00000456167 GeneID:6048 KEGG:hsa:6048 UCSC:uc003oaj.4
CTD:6048 GeneCards:GC06P032146 H-InvDB:HIX0034363 HGNC:HGNC:10068
HPA:CAB034107 MIM:602677 neXtProt:NX_Q99942 PharmGKB:PA34442
InParanoid:Q99942 OMA:FQSFGDT OrthoDB:EOG469QVX GenomeRNAi:6048
NextBio:23565 ArrayExpress:Q99942 Bgee:Q99942 CleanEx:HS_RNF5
Genevestigator:Q99942 GermOnline:ENSG00000204308 Uniprot:Q99942
Length = 180
Score = 227 (85.0 bits), Expect = 6.5e-19, P = 6.5e-19
Identities = 42/94 (44%), Positives = 58/94 (61%)
Query: 38 GSFFECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNCPVCKANISVA 97
G+ FECNICL++A++ VV++CGHLYCWPC+++WL + ++Q CPVCKA IS
Sbjct: 22 GATFECNICLETAREAVVSVCGHLYCWPCLHQWLETRP-------ERQECPVCKAGISRE 74
Query: 98 SLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSA 131
+VPLYGRG D + RP P +
Sbjct: 75 KVVPLYGRGS-QKPQDPRLKTPPRPQGQRPAPES 107
>UNIPROTKB|A5A8Y3 [details] [associations]
symbol:RNF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071712 "ER-associated misfolded protein catabolic
process" evidence=IEA] [GO:0070936 "protein K48-linked
ubiquitination" evidence=IEA] [GO:0070534 "protein K63-linked
ubiquitination" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 GO:GO:0070936
GO:GO:0070534 GO:GO:0071712 EMBL:AL773562 HOGENOM:HOG000238304
KO:K10666 eggNOG:NOG300581 GeneTree:ENSGT00390000014107
HOVERGEN:HBG054495 CTD:6048 OMA:FQSFGDT OrthoDB:EOG469QVX
EMBL:CT954269 RefSeq:NP_001116696.1 UniGene:Ssc.1246
ProteinModelPortal:A5A8Y3 Ensembl:ENSSSCT00000001585
GeneID:100144528 KEGG:ssc:100144528 Uniprot:A5A8Y3
Length = 180
Score = 227 (85.0 bits), Expect = 6.5e-19, P = 6.5e-19
Identities = 42/94 (44%), Positives = 58/94 (61%)
Query: 38 GSFFECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNCPVCKANISVA 97
G+ FECNICL++A++ VV++CGHLYCWPC+++WL + ++Q CPVCKA IS
Sbjct: 22 GATFECNICLETAREAVVSVCGHLYCWPCLHQWLETRP-------ERQECPVCKAGISRE 74
Query: 98 SLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSA 131
+VPLYGRG D + RP P +
Sbjct: 75 KVVPLYGRGS-QKPQDPRLKTPPRPQGQRPAPES 107
>UNIPROTKB|E2QS10 [details] [associations]
symbol:RNF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IEA] [GO:0070936 "protein K48-linked
ubiquitination" evidence=IEA] [GO:0070534 "protein K63-linked
ubiquitination" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 GO:GO:0070936
GO:GO:0070534 GO:GO:0071712 KO:K10666 GeneTree:ENSGT00390000014107
CTD:6048 OMA:FQSFGDT EMBL:AAEX03008226 RefSeq:XP_532092.1
Ensembl:ENSCAFT00000001208 GeneID:474858 KEGG:cfa:474858
NextBio:20850802 Uniprot:E2QS10
Length = 180
Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 38/69 (55%), Positives = 52/69 (75%)
Query: 38 GSFFECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNCPVCKANISVA 97
G+ FECNICL++A++ VV++CGHLYCWPC+++WL + ++Q CPVCKA IS
Sbjct: 22 GATFECNICLETAREAVVSVCGHLYCWPCLHQWLETRP-------ERQECPVCKAGISRE 74
Query: 98 SLVPLYGRG 106
+VPLYGRG
Sbjct: 75 KVVPLYGRG 83
>UNIPROTKB|E9PN08 [details] [associations]
symbol:RNF5 "E3 ubiquitin-protein ligase RNF5" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:BX284686 HGNC:HGNC:10068 IPI:IPI00514241
ProteinModelPortal:E9PN08 SMR:E9PN08 Ensembl:ENST00000472060
ArrayExpress:E9PN08 Bgee:E9PN08 Uniprot:E9PN08
Length = 91
Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 38/69 (55%), Positives = 52/69 (75%)
Query: 38 GSFFECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNCPVCKANISVA 97
G+ FECNICL++A++ VV++CGHLYCWPC+++WL + ++Q CPVCKA IS
Sbjct: 22 GATFECNICLETAREAVVSVCGHLYCWPCLHQWLETRP-------ERQECPVCKAGISRE 74
Query: 98 SLVPLYGRG 106
+VPLYGRG
Sbjct: 75 KVVPLYGRG 83
>ZFIN|ZDB-GENE-040426-1977 [details] [associations]
symbol:rnf185 "ring finger protein 185"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016874
"ligase activity" evidence=IEA] [GO:0005741 "mitochondrial outer
membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 ZFIN:ZDB-GENE-040426-1977
GO:GO:0016021 GO:GO:0005741 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0006914 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 HOGENOM:HOG000238304
KO:K10666 CTD:91445 eggNOG:NOG300581 GeneTree:ENSGT00390000014107
HOVERGEN:HBG054495 OrthoDB:EOG4R7VC8 EMBL:BC059445 IPI:IPI00506188
RefSeq:NP_998202.1 UniGene:Dr.11136 ProteinModelPortal:Q6PC78
Ensembl:ENSDART00000046781 GeneID:406310 KEGG:dre:406310
InParanoid:Q6PC78 NextBio:20817938 Bgee:Q6PC78 Uniprot:Q6PC78
Length = 194
Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 41/91 (45%), Positives = 58/91 (63%)
Query: 39 SFFECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNCPVCKANISVAS 98
S FECNICLD+++D V++LCGHL+CWPC+++WL + + +Q CPVCKA IS
Sbjct: 37 STFECNICLDTSKDAVISLCGHLFCWPCLHQWLETRPN-------RQVCPVCKAGISRDK 89
Query: 99 LVPLYGRGGISSASDSKKPNLGEVVPSRPHP 129
++PLYGRG + D ++ RP P
Sbjct: 90 VIPLYGRGS-TGQQDPREKTPPRPQGQRPEP 119
>MGI|MGI:1860076 [details] [associations]
symbol:Rnf5 "ring finger protein 5" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0044257 "cellular protein catabolic process"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISO]
[GO:0070936 "protein K48-linked ubiquitination" evidence=ISO]
[GO:0071712 "ER-associated misfolded protein catabolic process"
evidence=ISO] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 EMBL:AF030001 MGI:MGI:1860076 Prosite:PS00518
GO:GO:0016021 GO:GO:0005789 GO:GO:0031966 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070936 GO:GO:0070534 GO:GO:0071712
HOGENOM:HOG000238304 KO:K10666 eggNOG:NOG300581
GeneTree:ENSGT00390000014107 HOVERGEN:HBG054495 CTD:6048
OMA:FQSFGDT OrthoDB:EOG469QVX EMBL:BC016449 IPI:IPI00128461
PIR:T09063 RefSeq:NP_062276.1 UniGene:Mm.274542
ProteinModelPortal:O35445 SMR:O35445 MINT:MINT-1341225
STRING:O35445 PhosphoSite:O35445 PRIDE:O35445
Ensembl:ENSMUST00000015622 GeneID:54197 KEGG:mmu:54197
UCSC:uc008ccy.1 InParanoid:O35445 NextBio:311046 Bgee:O35445
CleanEx:MM_RNF5 Genevestigator:O35445 GermOnline:ENSMUSG00000015478
Uniprot:O35445
Length = 180
Score = 220 (82.5 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 41/91 (45%), Positives = 55/91 (60%)
Query: 41 FECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNCPVCKANISVASLV 100
FECNICL++A++ VV++CGHLYCWPC+++WL + +Q CPVCKA IS +V
Sbjct: 25 FECNICLETAREAVVSVCGHLYCWPCLHQWLETRPD-------RQECPVCKAGISREKVV 77
Query: 101 PLYGRGGISSASDSKKPNLGEVVPSRPHPSA 131
PLYGRG D + RP P +
Sbjct: 78 PLYGRGS-QKPQDPRLKTPPRPQGQRPAPES 107
>RGD|1588458 [details] [associations]
symbol:Rnf5 "ring finger protein 5, E3 ubiquitin protein ligase"
species:10116 "Rattus norvegicus" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA;ISO] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0031966 "mitochondrial membrane" evidence=IEA] [GO:0044257
"cellular protein catabolic process" evidence=ISO] [GO:0070534
"protein K63-linked ubiquitination" evidence=IEA;ISO] [GO:0070936
"protein K48-linked ubiquitination" evidence=IEA;ISO] [GO:0071712
"ER-associated misfolded protein catabolic process"
evidence=IEA;ISO] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 RGD:1588458 Prosite:PS00518 GO:GO:0016021
GO:GO:0005789 GO:GO:0031966 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070936 GO:GO:0070534 GO:GO:0071712
HOGENOM:HOG000238304 KO:K10666 eggNOG:NOG300581
GeneTree:ENSGT00390000014107 HOVERGEN:HBG054495 CTD:6048
OMA:FQSFGDT OrthoDB:EOG469QVX EMBL:BC088341 IPI:IPI00215379
RefSeq:NP_001102495.1 UniGene:Rn.136937 ProteinModelPortal:Q5M807
SMR:Q5M807 STRING:Q5M807 Ensembl:ENSRNOT00000000501 GeneID:407784
KEGG:rno:407784 UCSC:RGD:1588458 InParanoid:Q5M807 NextBio:696189
Genevestigator:Q5M807 GermOnline:ENSRNOG00000000438 Uniprot:Q5M807
Length = 180
Score = 220 (82.5 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 41/91 (45%), Positives = 55/91 (60%)
Query: 41 FECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNCPVCKANISVASLV 100
FECNICL++A++ VV++CGHLYCWPC+++WL + +Q CPVCKA IS +V
Sbjct: 25 FECNICLETAREAVVSVCGHLYCWPCLHQWLETRPD-------RQECPVCKAGISREKVV 77
Query: 101 PLYGRGGISSASDSKKPNLGEVVPSRPHPSA 131
PLYGRG D + RP P +
Sbjct: 78 PLYGRGS-QKPQDPRLKTPPRPQGQRPAPES 107
>FB|FBgn0052847 [details] [associations]
symbol:CG32847 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 EMBL:AE014296
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HSSP:P28990 GeneTree:ENSGT00390000014107
EMBL:BT044276 RefSeq:NP_730026.1 UniGene:Dm.34005 SMR:Q8IQM1
EnsemblMetazoa:FBtr0075639 GeneID:318245 KEGG:dme:Dmel_CG32847
UCSC:CG32847-RB FlyBase:FBgn0052847 InParanoid:Q8IQM1
OrthoDB:EOG43R24T GenomeRNAi:318245 NextBio:845309 Uniprot:Q8IQM1
Length = 164
Score = 215 (80.7 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 41/101 (40%), Positives = 63/101 (62%)
Query: 28 SAPTNVPE-KDGSFFECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQN 86
SA T V + KD SF+ECNICLD+AQ+ VV++CGHL+CWPC+Y+W+ +
Sbjct: 2 SADTFVMDTKDESFYECNICLDTAQNAVVSMCGHLFCWPCLYQWILTKPD-------HTV 54
Query: 87 CPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 127
CPVCK+ + + ++P+Y R +D ++ + + P RP
Sbjct: 55 CPVCKSGVDRSKVIPVYAR------NDKRQEDPRDKTPPRP 89
>FB|FBgn0052581 [details] [associations]
symbol:CG32581 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
EMBL:AE014298 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 eggNOG:COG5574 KO:K10666
GeneTree:ENSGT00390000014107 EMBL:BT082041 RefSeq:NP_001096988.2
RefSeq:NP_727898.2 UniGene:Dm.33538 SMR:Q8IR26 IntAct:Q8IR26
MINT:MINT-741955 STRING:Q8IR26 EnsemblMetazoa:FBtr0074184
EnsemblMetazoa:FBtr0113439 GeneID:318098 KEGG:dme:Dmel_CG32581
UCSC:CG32581-RA FlyBase:FBgn0052581 InParanoid:Q8IR26
OrthoDB:EOG4QBZN7 GenomeRNAi:318098 NextBio:844797 Uniprot:Q8IR26
Length = 283
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 39/91 (42%), Positives = 55/91 (60%)
Query: 37 DGSFFECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNCPVCKANISV 96
D S +ECNICLD+A+D VV++CGHL+CWPC+++WL + + ++ CPVCKA +
Sbjct: 119 DDSLYECNICLDTAKDAVVSMCGHLFCWPCLHQWLLTRPN-------RKLCPVCKAAVDK 171
Query: 97 ASLVPLYGRGGISSASDSKKPNLGEVVPSRP 127
++PLYGR K VP RP
Sbjct: 172 DKVIPLYGRNSTHQEDPRNK------VPPRP 196
>FB|FBgn0030693 [details] [associations]
symbol:CG8974 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
EMBL:AE014298 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 eggNOG:COG5574 KO:K10666
GeneTree:ENSGT00390000014107 OrthoDB:EOG4QBZN7 EMBL:AY060297
RefSeq:NP_573076.1 RefSeq:NP_727896.1 RefSeq:NP_727897.1
RefSeq:NP_996448.1 RefSeq:NP_996449.1 UniGene:Dm.7984 SMR:Q9VXP1
STRING:Q9VXP1 EnsemblMetazoa:FBtr0074185 EnsemblMetazoa:FBtr0074186
EnsemblMetazoa:FBtr0074187 EnsemblMetazoa:FBtr0074188
EnsemblMetazoa:FBtr0074189 GeneID:32532 KEGG:dme:Dmel_CG8974
UCSC:CG8974-RA FlyBase:FBgn0030693 InParanoid:Q9VXP1 OMA:ENNDETS
GenomeRNAi:32532 NextBio:778955 Uniprot:Q9VXP1
Length = 277
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 39/91 (42%), Positives = 55/91 (60%)
Query: 37 DGSFFECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNCPVCKANISV 96
D S +ECNICLD+A+D VV++CGHL+CWPC+++WL + + ++ CPVCKA +
Sbjct: 119 DDSLYECNICLDTAKDAVVSMCGHLFCWPCLHQWLLTRPN-------RKLCPVCKAAVDK 171
Query: 97 ASLVPLYGRGGISSASDSKKPNLGEVVPSRP 127
++PLYGR K VP RP
Sbjct: 172 DKVIPLYGRNSTHQEDPRNK------VPPRP 196
>TAIR|locus:2050533 [details] [associations]
symbol:AT2G44410 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
EMBL:CP002685 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:BT011628 EMBL:BT012267 IPI:IPI00542531
RefSeq:NP_181969.2 UniGene:At.21385 ProteinModelPortal:Q6NLR3
SMR:Q6NLR3 EnsemblPlants:AT2G44410.1 GeneID:819048
KEGG:ath:AT2G44410 TAIR:At2g44410 HOGENOM:HOG000143348
InParanoid:Q6NLR3 OMA:RRTIDSI PhylomeDB:Q6NLR3
ProtClustDB:CLSN2918256 Genevestigator:Q6NLR3 Uniprot:Q6NLR3
Length = 413
Score = 203 (76.5 bits), Expect = 9.3e-16, P = 9.3e-16
Identities = 36/91 (39%), Positives = 54/91 (59%)
Query: 38 GSFFECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNCPVCKANISVA 97
G FF+CNICL+ A+DP++T CGHL+CW C Y+ + L+ E CPVC ++ A
Sbjct: 120 GGFFDCNICLEKAEDPILTCCGHLFCWGCFYQ---LPLIYLNIKE----CPVCDGEVTDA 172
Query: 98 SLVPLYGRGGISSASDSKKPNLGEVVPSRPH 128
++P+YG G + K + G +P RP+
Sbjct: 173 EVIPIYGNGDDCDGTKPKLEDCGISLPPRPN 203
>FB|FBgn0085337 [details] [associations]
symbol:CG34308 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 EMBL:AE014297
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00390000014107 EMBL:BT029722
RefSeq:NP_001097770.1 UniGene:Dm.36040 SMR:A1A749
EnsemblMetazoa:FBtr0112504 GeneID:5740483 KEGG:dme:Dmel_CG34308
UCSC:CG34308-RA FlyBase:FBgn0085337 InParanoid:A1A749
NextBio:20891521 Uniprot:A1A749
Length = 108
Score = 129 (50.5 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 26/86 (30%), Positives = 45/86 (52%)
Query: 21 KQKWSPTSAPTNVPEKD----GSFFECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTS 76
K K +P + N E++ S++ C +C+ +A+ P V+ CGH +C CIY W+ Q
Sbjct: 8 KDKRNPNYSGGNSGEEEDSWMNSYYTCLVCMQTAESPRVSFCGHHFCSQCIYNWIRSQ-- 65
Query: 77 SLDADEQQQNCPVCKANISVASLVPL 102
+ Q CP C++ I +L+ +
Sbjct: 66 -----KYQAKCPYCQSLIGENTLITI 86
>ASPGD|ASPL0000031841 [details] [associations]
symbol:AN5681 species:162425 "Emericella nidulans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005779 "integral
to peroxisomal membrane" evidence=IEA] [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] [GO:0016558 "protein import into peroxisome matrix"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR001841 InterPro:IPR025654 PROSITE:PS50089 SMART:SM00184
InterPro:IPR006845 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005779 EMBL:AACD01000098 EMBL:BN001305 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0016558 InterPro:IPR017907 eggNOG:COG5574
KO:K13346 OMA:FRQRQRA PANTHER:PTHR23350 Pfam:PF04757
HOGENOM:HOG000180194 OrthoDB:EOG44TSJ5 RefSeq:XP_663285.1
ProteinModelPortal:Q5B199 STRING:Q5B199
EnsemblFungi:CADANIAT00003384 GeneID:2871973 KEGG:ani:AN5681.2
Uniprot:Q5B199
Length = 373
Score = 144 (55.7 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 25/76 (32%), Positives = 42/76 (55%)
Query: 30 PTNVPE-KDGSFFECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNCP 88
P +P DG +C +CL+S +DP VT CGH++CW C+ W+ ++ CP
Sbjct: 308 PNAIPWIPDGQQRKCTLCLESFKDPSVTTCGHVFCWTCVCDWVR----------EKPECP 357
Query: 89 VCKANISVASLVPLYG 104
+C+ + + ++PL G
Sbjct: 358 LCRQELLASKVLPLRG 373
>TAIR|locus:2057780 [details] [associations]
symbol:PEX10 "peroxin 10" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0007031 "peroxisome organization"
evidence=IMP] [GO:0009793 "embryo development ending in seed
dormancy" evidence=IMP] [GO:0005777 "peroxisome" evidence=IDA]
[GO:0005783 "endoplasmic reticulum" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009853 "photorespiration" evidence=IMP] [GO:0010381
"attachment of peroxisome to chloroplast" evidence=IMP] [GO:0006635
"fatty acid beta-oxidation" evidence=RCA;IMP] [GO:0016558 "protein
import into peroxisome matrix" evidence=RCA;IMP] InterPro:IPR001841
InterPro:IPR025654 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
InterPro:IPR006845 Prosite:PS00518 GO:GO:0005829 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005777 GO:GO:0046872 GO:GO:0008270
GO:GO:0009793 GO:GO:0005779 GO:GO:0006635 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0016558 GO:GO:0009853 InterPro:IPR017907
EMBL:AC002505 EMBL:AC004484 EMBL:AF119572 EMBL:AJ276134
EMBL:AK117879 EMBL:BT005340 EMBL:AY087109 IPI:IPI00538786
PIR:T00968 RefSeq:NP_565621.1 UniGene:At.22386
ProteinModelPortal:Q9SYU4 SMR:Q9SYU4 IntAct:Q9SYU4 STRING:Q9SYU4
TCDB:3.A.20.1.2 PaxDb:Q9SYU4 PRIDE:Q9SYU4 EnsemblPlants:AT2G26350.1
GeneID:817175 KEGG:ath:AT2G26350 GeneFarm:2449 TAIR:At2g26350
eggNOG:COG5574 HOGENOM:HOG000005805 InParanoid:Q9SYU4 KO:K13346
OMA:FRQRQRA PhylomeDB:Q9SYU4 ProtClustDB:CLSN2688445
Genevestigator:Q9SYU4 GermOnline:AT2G26350 GO:GO:0010381
PANTHER:PTHR23350 Pfam:PF04757 Uniprot:Q9SYU4
Length = 381
Score = 139 (54.0 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 34/95 (35%), Positives = 49/95 (51%)
Query: 9 ETGYATEEDASLKQKWSPTSAPTNVPEKDGSFFECNICLDSAQDPVVTLCGHLYCWPCIY 68
E G +A K WS TS T+ E G +C +CL + Q P T CGH++CW CI
Sbjct: 299 EEGNLITSEAE-KGNWS-TSDSTST-EAVG---KCTLCLSTRQHPTATPCGHVFCWSCIM 352
Query: 69 KWLHVQTSSLDADEQQQNCPVCKANISVASLVPLY 103
+W + ++Q CP+C+ + +SLV LY
Sbjct: 353 EWCN----------EKQECPLCRTPNTHSSLVCLY 377
>DICTYBASE|DDB_G0282693 [details] [associations]
symbol:pex10 "peroxisome biogenesis factor 10"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0007031 "peroxisome organization"
evidence=IEA;ISS] [GO:0005779 "integral to peroxisomal membrane"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA;ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005777 "peroxisome" evidence=IEA] InterPro:IPR001841
InterPro:IPR025654 PROSITE:PS50089 SMART:SM00184 InterPro:IPR006845
dictyBase:DDB_G0282693 Prosite:PS00518 EMBL:AAFI02000047
GenomeReviews:CM000152_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0007031
GO:GO:0005779 GO:GO:0005778 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0016558 InterPro:IPR017907 eggNOG:COG5574 KO:K13346
OMA:FRQRQRA PANTHER:PTHR23350 Pfam:PF04757 RefSeq:XP_640208.2
ProteinModelPortal:Q54S31 EnsemblProtists:DDB0238052 GeneID:8623748
KEGG:ddi:DDB_G0282693 ProtClustDB:CLSZ2430477 Uniprot:Q54S31
Length = 374
Score = 136 (52.9 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 23/62 (37%), Positives = 35/62 (56%)
Query: 42 ECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNCPVCKANISVASLVP 101
+C +CL+ T+CGHL+CW CI +W + ++ CPVC+ IS+ + VP
Sbjct: 321 KCTLCLEVRTHTTATICGHLFCWHCITEWCN----------NKEQCPVCRCPISIRTCVP 370
Query: 102 LY 103
LY
Sbjct: 371 LY 372
>ZFIN|ZDB-GENE-030131-3306 [details] [associations]
symbol:hltf "helicase-like transcription factor"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR014905 Pfam:PF00176 Pfam:PF00271
Pfam:PF08797 PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184
SMART:SM00490 SMART:SM00910 Prosite:PS00518
ZFIN:ZDB-GENE-030131-3306 GO:GO:0005524 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004386
InterPro:IPR017907 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 CTD:6596 HOVERGEN:HBG079192 KO:K15711 OMA:SNWIDQF
GeneTree:ENSGT00700000104586 HOGENOM:HOG000172619 OrthoDB:EOG47SSD6
EMBL:CR788256 IPI:IPI00500566 RefSeq:XP_693071.2 UniGene:Dr.105912
Ensembl:ENSDART00000099350 Ensembl:ENSDART00000132050 GeneID:564651
KEGG:dre:564651 NextBio:20885486 Uniprot:B0V118
Length = 942
Score = 139 (54.0 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 27/67 (40%), Positives = 39/67 (58%)
Query: 38 GSFFECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNCPVCKANISVA 97
GS EC ICLDS + PV+T C H++C PCI + + ++++Q CP+C+A I
Sbjct: 692 GSDEECAICLDSLRQPVITYCAHVFCRPCICEVIR-------SEKEQAKCPLCRAQIKTK 744
Query: 98 SLVPLYG 104
LV G
Sbjct: 745 ELVEYPG 751
>CGD|CAL0005238 [details] [associations]
symbol:orf19.5438 species:5476 "Candida albicans" [GO:0016925
"protein sumoylation" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0000723 "telomere maintenance"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 CGD:CAL0005238 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AACQ01000051 EMBL:AACQ01000050
RefSeq:XP_717716.1 RefSeq:XP_717810.1 ProteinModelPortal:Q5A7M8
GeneID:3640523 GeneID:3640681 KEGG:cal:CaO19.12893
KEGG:cal:CaO19.5438 eggNOG:NOG131815 Uniprot:Q5A7M8
Length = 129
Score = 108 (43.1 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 26/98 (26%), Positives = 42/98 (42%)
Query: 25 SPTSAPTNVPEKDGSFFECNICLDSAQDPVVTLCGHLYCWPCIYKWL---HVQTSSLDAD 81
+PT K S EC IC D + + T CGH++C CI + + H + +
Sbjct: 33 NPTQPEERRITKKLSDVECPICFDEVRRAITTSCGHVFCLECIERSISSSHARGQVRSSQ 92
Query: 82 EQQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNL 119
+ CP+C+ + +PL + A KP+L
Sbjct: 93 RGRGLCPLCRKQVVFKETIPLK----MKKAEKIDKPDL 126
>FB|FBgn0038125 [details] [associations]
symbol:CG8141 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 EMBL:AE014297
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 FlyBase:FBgn0038125 RefSeq:NP_731776.1
UniGene:Dm.12934 ProteinModelPortal:Q9VFY3 SMR:Q9VFY3 IntAct:Q9VFY3
MINT:MINT-290332 STRING:Q9VFY3 EnsemblMetazoa:FBtr0082734
GeneID:41622 KEGG:dme:Dmel_CG8141 UCSC:CG8141-RA InParanoid:Q9VFY3
OMA:GVITICG PhylomeDB:Q9VFY3 GenomeRNAi:41622 NextBio:824684
ArrayExpress:Q9VFY3 Bgee:Q9VFY3 Uniprot:Q9VFY3
Length = 239
Score = 121 (47.7 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 26/88 (29%), Positives = 44/88 (50%)
Query: 41 FECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNCPVCKANISV-ASL 99
+ CN C + V+T+CGHL+CW C+ W + ++ Q CP C+ ++ + +
Sbjct: 83 YVCNECNQYVRGGVITICGHLFCWTCL--WPKLSGTA------QPRCPCCQRHLLMYEDI 134
Query: 100 VPLYGRGGISSASDSKKPNLGEVVPSRP 127
+P +G G + D+ P VP RP
Sbjct: 135 MPFHGEGPNARQEDNNVPAQPGSVP-RP 161
>UNIPROTKB|A2AAZ5 [details] [associations]
symbol:TRIM39 "E3 ubiquitin-protein ligase TRIM39"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOVERGEN:HBG001357 HOGENOM:HOG000234134
EMBL:AL662832 EMBL:AL662795 EMBL:AL773535 EMBL:BX294158
EMBL:CR759928 EMBL:BX927214 EMBL:CR759281 EMBL:BX248580
HGNC:HGNC:10065 IPI:IPI00796458 SMR:A2AAZ5 Ensembl:ENST00000411711
Ensembl:ENST00000416213 Ensembl:ENST00000424571
Ensembl:ENST00000430414 Ensembl:ENST00000453856
Ensembl:ENST00000456425 Ensembl:ENST00000458516 Uniprot:A2AAZ5
Length = 144
Score = 104 (41.7 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 21/59 (35%), Positives = 31/59 (52%)
Query: 43 CNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNCPVCKANISVASLVP 101
C++CL+ ++PV+ CGH +C CI +W L+ D CPVC+ SL P
Sbjct: 29 CSVCLEYLKEPVIIECGHNFCKACITRWWE----DLERDFP---CPVCRKTSRYRSLRP 80
>UNIPROTKB|G4NE71 [details] [associations]
symbol:MGG_00145 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001841 InterPro:IPR025654 PROSITE:PS50089
SMART:SM00184 InterPro:IPR006845 Prosite:PS00518 EMBL:CM001235
GO:GO:0046872 GO:GO:0008270 GO:GO:0005779 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0016558 InterPro:IPR017907 KO:K13346
PANTHER:PTHR23350 Pfam:PF04757 RefSeq:XP_003718984.1
EnsemblFungi:MGG_00145T0 GeneID:2675212 KEGG:mgr:MGG_00145
Uniprot:G4NE71
Length = 448
Score = 121 (47.7 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 20/60 (33%), Positives = 32/60 (53%)
Query: 43 CNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNCPVCKANISVASLVPL 102
C +CL+ +DP T CGH++CW CI W+ ++ CP+C+ V ++PL
Sbjct: 393 CTLCLEGLRDPSATPCGHVFCWSCIGDWVR----------EKPECPLCRREALVQHILPL 442
>FB|FBgn0035233 [details] [associations]
symbol:Pex10 "Peroxin 10" species:7227 "Drosophila
melanogaster" [GO:0007031 "peroxisome organization" evidence=ISS]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0005779 "integral to peroxisomal membrane" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0048137
"spermatocyte division" evidence=IMP] [GO:0007286 "spermatid
development" evidence=IMP] [GO:0007285 "primary spermatocyte
growth" evidence=IMP] [GO:0007112 "male meiosis cytokinesis"
evidence=IMP] InterPro:IPR001841 InterPro:IPR025654 PROSITE:PS50089
SMART:SM00184 InterPro:IPR006845 Prosite:PS00518 EMBL:AE014296
GO:GO:0007286 GO:GO:0046872 GO:GO:0008270 GO:GO:0005779
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0016558 GO:GO:0007112
InterPro:IPR017907 GO:GO:0048137 GO:GO:0007285 eggNOG:COG5574
KO:K13346 OMA:FRQRQRA PANTHER:PTHR23350 Pfam:PF04757 CTD:5192
GeneTree:ENSGT00510000048446 EMBL:AY069290 RefSeq:NP_647624.1
UniGene:Dm.2194 SMR:Q9W0D7 IntAct:Q9W0D7 MINT:MINT-1647351
EnsemblMetazoa:FBtr0072743 EnsemblMetazoa:FBtr0333397 GeneID:38182
KEGG:dme:Dmel_CG7864 UCSC:CG7864-RA FlyBase:FBgn0035233
InParanoid:Q9W0D7 OrthoDB:EOG4ZS7K2 GenomeRNAi:38182 NextBio:807389
Uniprot:Q9W0D7
Length = 299
Score = 117 (46.2 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 18/61 (29%), Positives = 35/61 (57%)
Query: 42 ECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNCPVCKANISVASLVP 101
+C +CL+ D +T CGH++CW C+ +WL E++ CP+C+ ++ + ++
Sbjct: 245 QCILCLEPRSDSSLTPCGHIFCWSCLLEWL----------EERDECPLCRESLKKSQVIL 294
Query: 102 L 102
L
Sbjct: 295 L 295
>UNIPROTKB|A2AAZ4 [details] [associations]
symbol:TRIM39 "E3 ubiquitin-protein ligase TRIM39"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL662832 EMBL:AL662795 EMBL:AL773535
EMBL:BX294158 EMBL:CR759928 EMBL:BX927214 EMBL:CR759281
EMBL:BX248580 HGNC:HGNC:10065 IPI:IPI00790609 SMR:A2AAZ4
Ensembl:ENST00000412150 Ensembl:ENST00000418057
Ensembl:ENST00000426676 Ensembl:ENST00000438089
Ensembl:ENST00000440271 Ensembl:ENST00000447542
Ensembl:ENST00000450818 Uniprot:A2AAZ4
Length = 74
Score = 98 (39.6 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 43 CNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNCPVCK 91
C++CL+ ++PV+ CGH +C CI +W L+ D CPVC+
Sbjct: 29 CSVCLEYLKEPVIIECGHNFCKACITRWWE----DLERDFP---CPVCR 70
>UNIPROTKB|A2AE50 [details] [associations]
symbol:TRIM26 "Tripartite motif-containing protein 26"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL662832
EMBL:AL844220 EMBL:BX927221 EMBL:CR759838 EMBL:CR788282
EMBL:BX248419 EMBL:CR388382 EMBL:BX927189 HGNC:HGNC:12962
EMBL:AL662782 EMBL:AL671855 EMBL:AL845450 IPI:IPI00642517
SMR:A2AE50 Ensembl:ENST00000427612 Ensembl:ENST00000429583
Ensembl:ENST00000431641 Ensembl:ENST00000434785
Ensembl:ENST00000435387 Ensembl:ENST00000440149
Ensembl:ENST00000445457 Ensembl:ENST00000447942
HOGENOM:HOG000060139 HOVERGEN:HBG084408 Uniprot:A2AE50
Length = 122
Score = 98 (39.6 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 24/77 (31%), Positives = 37/77 (48%)
Query: 27 TSAPTNVPEKDGSFFECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQN 86
TSAP E++ + C+ICLD +DPV CGH++C C T +
Sbjct: 3 TSAPLRSLEEEVT---CSICLDYLRDPVTIDCGHVFCRSCT-------TDVRPISGSRPV 52
Query: 87 CPVCKANISVASLVPLY 103
CP+CK ++ P++
Sbjct: 53 CPLCKKPFKKENIRPVW 69
>UNIPROTKB|E9PMW5 [details] [associations]
symbol:TRIM3 "Tripartite motif-containing protein 3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AC084337 InterPro:IPR017907 IPI:IPI00985414
HGNC:HGNC:10064 ProteinModelPortal:E9PMW5 SMR:E9PMW5
Ensembl:ENST00000529529 ArrayExpress:E9PMW5 Bgee:E9PMW5
Uniprot:E9PMW5
Length = 96
Score = 98 (39.6 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 25/71 (35%), Positives = 36/71 (50%)
Query: 21 KQKWSPTSAPTNVPEKDGSFFECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDA 80
K++ SP P V D F C+ICLD Q P V C H +C C+ ++ Q+ +L
Sbjct: 3 KREDSP--GP-EVQPMDKQFLVCSICLDRYQCPKVLPCLHTFCERCLQNYIPAQSLTL-- 57
Query: 81 DEQQQNCPVCK 91
+CPVC+
Sbjct: 58 -----SCPVCR 63
>ASPGD|ASPL0000057529 [details] [associations]
symbol:AN10006 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 EMBL:BN001308 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EnsemblFungi:CADANIAT00002715 HOGENOM:HOG000234991 Uniprot:C8VRE2
Length = 192
Score = 112 (44.5 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 41 FECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQN----CPVCKANIS 95
+ C +C+++ +D T+CGHL+C CI +WL T AD + CP C+ +S
Sbjct: 102 YTCPVCMETPKDATATICGHLFCHKCIMEWL-ATTEEQRADRAGKAPRGLCPQCRQPLS 159
>GENEDB_PFALCIPARUM|PF10_0127 [details] [associations]
symbol:PF10_0127 "hypothetical protein"
species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001841 InterPro:IPR008974 PROSITE:PS50089
SMART:SM00184 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AE014185 SUPFAM:SSF49599
RefSeq:XP_001347412.2 ProteinModelPortal:Q8IJR5
EnsemblProtists:PF10_0127:mRNA GeneID:810285 KEGG:pfa:PF10_0127
EuPathDB:PlasmoDB:PF3D7_1013000 HOGENOM:HOG000283129
ProtClustDB:CLSZ2446623 Uniprot:Q8IJR5
Length = 520
Score = 120 (47.3 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 27/78 (34%), Positives = 42/78 (53%)
Query: 31 TNVPEKDGSF--FECNICLDSAQDPVVTLCGHLYCWPCIY-KWLHVQTSSLDADEQQQNC 87
+N EK+ + F C++CLD PV+TLC H+ C+ C+Y LH ++NC
Sbjct: 16 SNCLEKEEIYENFICSVCLDLCDTPVITLCNHICCYKCMYYSLLH-----------KRNC 64
Query: 88 PVCKANISVASLVPLYGR 105
P+CK I +L + G+
Sbjct: 65 PICKQIIKHNNLKKITGK 82
>UNIPROTKB|Q8IJR5 [details] [associations]
symbol:PF10_0127 "Conserved Plasmodium protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001841 InterPro:IPR008974 PROSITE:PS50089
SMART:SM00184 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AE014185 SUPFAM:SSF49599
RefSeq:XP_001347412.2 ProteinModelPortal:Q8IJR5
EnsemblProtists:PF10_0127:mRNA GeneID:810285 KEGG:pfa:PF10_0127
EuPathDB:PlasmoDB:PF3D7_1013000 HOGENOM:HOG000283129
ProtClustDB:CLSZ2446623 Uniprot:Q8IJR5
Length = 520
Score = 120 (47.3 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 27/78 (34%), Positives = 42/78 (53%)
Query: 31 TNVPEKDGSF--FECNICLDSAQDPVVTLCGHLYCWPCIY-KWLHVQTSSLDADEQQQNC 87
+N EK+ + F C++CLD PV+TLC H+ C+ C+Y LH ++NC
Sbjct: 16 SNCLEKEEIYENFICSVCLDLCDTPVITLCNHICCYKCMYYSLLH-----------KRNC 64
Query: 88 PVCKANISVASLVPLYGR 105
P+CK I +L + G+
Sbjct: 65 PICKQIIKHNNLKKITGK 82
>UNIPROTKB|H0YH05 [details] [associations]
symbol:RNF10 "RING finger protein 10" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC063943 HGNC:HGNC:10055
ChiTaRS:RNF10 Ensembl:ENST00000541955 Uniprot:H0YH05
Length = 129
Score = 97 (39.2 bits), Expect = 0.00010, P = 0.00010
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 43 CNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNCPVCKANI 94
C ICL +T CGH++CW CI +L SL +++ CP+C +++
Sbjct: 18 CPICLYPPTAAKITRCGHIFCWACILHYL-----SL-SEKTWSKCPICYSSV 63
>RGD|1309031 [details] [associations]
symbol:Hltf "helicase-like transcription factor" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0006200 "ATP catabolic process" evidence=ISO] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR014905 Pfam:PF00176 Pfam:PF00271
Pfam:PF08797 PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184
SMART:SM00490 SMART:SM00910 RGD:1309031 Prosite:PS00518
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006357 GO:GO:0016887 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004386 InterPro:IPR017907
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 IPI:IPI00372747
Ensembl:ENSRNOT00000000095 UCSC:RGD:1309031 ArrayExpress:F1LT77
Uniprot:F1LT77
Length = 1004
Score = 122 (48.0 bits), Expect = 0.00012, P = 0.00012
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 38 GSFFECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNCPVCKANI 94
GS EC+ICLDS PV+T C H++C PCI + + ++ CP+C++NI
Sbjct: 750 GSDEECSICLDSLTFPVITHCAHVFCKPCICQ-------VIQREQPHAKCPLCRSNI 799
>ZFIN|ZDB-GENE-070912-318 [details] [associations]
symbol:ftr27 "finTRIM family, member 27"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 ZFIN:ZDB-GENE-070912-318 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 eggNOG:KOG2177 OrthoDB:EOG4R23TJ
GeneTree:ENSGT00670000097622 HOVERGEN:HBG106862 EMBL:BX548047
IPI:IPI00862890 UniGene:Dr.88749 Ensembl:ENSDART00000135584
OMA:YESHEES Uniprot:B0S6S1
Length = 171
Score = 107 (42.7 bits), Expect = 0.00019, P = 0.00019
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 41 FECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNC----PVCKANISV 96
F C+ICLD +DPV CGH YC CI ++ + + S+++ Q + P N+ +
Sbjct: 13 FSCSICLDLLKDPVTIPCGHSYCMNCITEYWNRRDLSINSCPQCRQTFTPKPALNKNVML 72
Query: 97 ASLV 100
A +V
Sbjct: 73 AEMV 76
>TAIR|locus:2024675 [details] [associations]
symbol:NLA "nitrogen limitation adaptation" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0010167 "response
to nitrate" evidence=IMP] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=TAS] [GO:0009626 "plant-type hypersensitive
response" evidence=IMP] [GO:0009627 "systemic acquired resistance"
evidence=IMP] [GO:0009697 "salicylic acid biosynthetic process"
evidence=IMP] [GO:0009751 "response to salicylic acid stimulus"
evidence=IEP] [GO:0010337 "regulation of salicylic acid metabolic
process" evidence=IMP] [GO:0042742 "defense response to bacterium"
evidence=IMP] [GO:0080021 "response to benzoic acid stimulus"
evidence=IEP;IMP] [GO:0006817 "phosphate ion transport"
evidence=RCA] [GO:0016036 "cellular response to phosphate
starvation" evidence=RCA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0016607
GO:GO:0042742 GO:GO:0008270 GO:GO:0009627 GO:GO:0009751
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0009626 GO:GO:0004842
InterPro:IPR017907 HOGENOM:HOG000240281 KO:K16275
ProtClustDB:CLSN2687631 InterPro:IPR004331 Pfam:PF03105
PROSITE:PS51382 EMBL:DQ059096 EMBL:AC009525 EMBL:AK229396
EMBL:AY088823 EMBL:BT044616 IPI:IPI00533758 IPI:IPI00891550
PIR:H86158 RefSeq:NP_001117218.1 RefSeq:NP_563667.1
UniGene:At.22880 UniGene:At.46895 ProteinModelPortal:Q9SRX9
SMR:Q9SRX9 STRING:Q9SRX9 EnsemblPlants:AT1G02860.1 GeneID:839559
KEGG:ath:AT1G02860 TAIR:At1g02860 eggNOG:NOG291077
InParanoid:Q9SRX9 OMA:CYMCACS PhylomeDB:Q9SRX9
Genevestigator:Q9SRX9 GO:GO:0010337 GO:GO:0080021 GO:GO:0010167
GO:GO:0009697 Uniprot:Q9SRX9
Length = 335
Score = 114 (45.2 bits), Expect = 0.00022, P = 0.00022
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 43 CNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQT-SSLDADEQQQNCPVCK 91
C+ICLD+ DP+ CGH+YC+ C V L E + CP+C+
Sbjct: 231 CSICLDTVFDPISLTCGHIYCYMCACSAASVNVVDGLKTAEATEKCPLCR 280
>ZFIN|ZDB-GENE-080218-19 [details] [associations]
symbol:ftr46 "finTRIM family, member 46"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 ZFIN:ZDB-GENE-080218-19
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00670000097622
EMBL:CABZ01034857 IPI:IPI00935014 Ensembl:ENSDART00000101232
Uniprot:F1Q9G0
Length = 390
Score = 115 (45.5 bits), Expect = 0.00022, P = 0.00022
Identities = 24/61 (39%), Positives = 34/61 (55%)
Query: 37 DGSFFECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQ--NCPVCKANI 94
D + F C +CLD QDPV CGH YC CI T + +EQ++ +CP+CK +
Sbjct: 9 DQNQFMCPVCLDLLQDPVTIPCGHSYCMSCI-------TDCWNQEEQKRIYSCPLCKQSF 61
Query: 95 S 95
+
Sbjct: 62 T 62
>TAIR|locus:2096264 [details] [associations]
symbol:AT3G05250 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0007165 "signal transduction"
evidence=RCA] [GO:0009755 "hormone-mediated signaling pathway"
evidence=RCA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 HSSP:P28990
EMBL:BT008778 EMBL:DQ086839 EMBL:AK117770 IPI:IPI00545519
RefSeq:NP_187176.2 UniGene:At.40705 ProteinModelPortal:Q8GYA2
SMR:Q8GYA2 IntAct:Q8GYA2 PRIDE:Q8GYA2 EnsemblPlants:AT3G05250.1
GeneID:819689 KEGG:ath:AT3G05250 TAIR:At3g05250 eggNOG:NOG245952
HOGENOM:HOG000083472 InParanoid:Q8GYA2 OMA:PLCKTEN PhylomeDB:Q8GYA2
ProtClustDB:CLSN2690722 Genevestigator:Q8GYA2 Uniprot:Q8GYA2
Length = 278
Score = 112 (44.5 bits), Expect = 0.00026, P = 0.00026
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 37 DGSFFE-CNICLDS-AQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNCPVCKA-N 93
DGS F+ C ICL ++ + C H +C+ CI +W+ V +S CP+CK N
Sbjct: 15 DGSDFDPCPICLGQFLRESYLDTCFHKFCFNCIKQWIKVVSSKASKQRSSVTCPLCKTEN 74
Query: 94 ISV 96
+S+
Sbjct: 75 LSI 77
>ZFIN|ZDB-GENE-041001-160 [details] [associations]
symbol:si:dkey-183n20.15 "si:dkey-183n20.15"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 ZFIN:ZDB-GENE-041001-160 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:BX322665 GeneTree:ENSGT00390000017123
eggNOG:NOG294660 KO:K15707 IPI:IPI00501386 RefSeq:NP_001038665.1
UniGene:Dr.85572 Ensembl:ENSDART00000141340 GeneID:570411
KEGG:dre:570411 InParanoid:Q5TZ71 OMA:LFCAPCL OrthoDB:EOG4P5KBQ
NextBio:20890117 Uniprot:Q5TZ71
Length = 227
Score = 110 (43.8 bits), Expect = 0.00026, P = 0.00026
Identities = 23/53 (43%), Positives = 30/53 (56%)
Query: 43 CNICLDSAQDPVVTLCGHLYCWPCIYK-WLHVQTSSLDADEQQQNCPVCKANI 94
C +CL A PV T CGHL+C PC+ W H S LDA +CP+C+ +
Sbjct: 48 CPVCLQMATYPVETNCGHLFCAPCLISYWKHC--SWLDAI----SCPLCRQTV 94
>MGI|MGI:1196437 [details] [associations]
symbol:Hltf "helicase-like transcription factor"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR014905 Pfam:PF00176 Pfam:PF00271
Pfam:PF08797 PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184
SMART:SM00490 SMART:SM00910 UniPathway:UPA00143 MGI:MGI:1196437
Prosite:PS00518 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0016874 GO:GO:0008270 GO:GO:0006357
GO:GO:0006351 GO:GO:0016568 GO:GO:0016887 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004386
InterPro:IPR017907 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 CTD:6596 HOVERGEN:HBG079192 KO:K15711 OMA:SNWIDQF
EMBL:AF010138 EMBL:AF010600 EMBL:BC039796 EMBL:BC057116
EMBL:BC059240 IPI:IPI00315178 RefSeq:NP_033236.2 RefSeq:NP_659208.2
UniGene:Mm.209650 ProteinModelPortal:Q6PCN7 SMR:Q6PCN7
STRING:Q6PCN7 PhosphoSite:Q6PCN7 PRIDE:Q6PCN7
Ensembl:ENSMUST00000002502 GeneID:20585 KEGG:mmu:20585
UCSC:uc008osk.1 GeneTree:ENSGT00700000104586 HOGENOM:HOG000172619
InParanoid:Q6PCN7 OrthoDB:EOG47SSD6 NextBio:298877 Bgee:Q6PCN7
CleanEx:MM_HLTF Genevestigator:Q6PCN7 GermOnline:ENSMUSG00000002428
Uniprot:Q6PCN7
Length = 1003
Score = 119 (46.9 bits), Expect = 0.00026, P = 0.00026
Identities = 23/57 (40%), Positives = 33/57 (57%)
Query: 38 GSFFECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNCPVCKANI 94
GS EC ICLDS PV+T C H++C PCI + +H +++ CP+C+ I
Sbjct: 749 GSDEECAICLDSLTFPVITHCAHVFCKPCICQVIH-------SEQPHAKCPLCRNEI 798
>UNIPROTKB|Q9ULV8 [details] [associations]
symbol:CBLC "Signal transduction protein CBL-C"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007166 "cell surface receptor signaling pathway"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0001784 "phosphotyrosine
binding" evidence=IDA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0017124 "SH3 domain binding" evidence=IDA] [GO:0005154
"epidermal growth factor receptor binding" evidence=IDA]
[GO:0042059 "negative regulation of epidermal growth factor
receptor signaling pathway" evidence=IDA] [GO:0043407 "negative
regulation of MAP kinase activity" evidence=IDA] [GO:0007175
"negative regulation of epidermal growth factor-activated receptor
activity" evidence=IDA] InterPro:IPR001841 InterPro:IPR000980
InterPro:IPR003153 InterPro:IPR011992 InterPro:IPR014741
InterPro:IPR024159 InterPro:IPR024162 Pfam:PF02262 Pfam:PF02761
PROSITE:PS50089 PROSITE:PS51506 SMART:SM00184 SMART:SM00252
Prosite:PS00518 GO:GO:0005634 Gene3D:3.30.505.10 GO:GO:0017124
GO:GO:0008270 GO:GO:0005509 Gene3D:1.10.238.10 GO:GO:0004871
GO:GO:0005154 GO:GO:0007166 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0043407 GO:GO:0004842 GO:GO:0001784 InterPro:IPR017907
GO:GO:0042787 HOVERGEN:HBG005255 KO:K04707 Gene3D:1.20.930.20
InterPro:IPR014742 PANTHER:PTHR23007 Pfam:PF02762 SUPFAM:SSF47668
HOGENOM:HOG000294176 EMBL:AB028645 EMBL:AF117646 EMBL:AF117647
EMBL:BC028915 IPI:IPI00008459 IPI:IPI00220418 RefSeq:NP_001124324.1
RefSeq:NP_036248.3 UniGene:Hs.466907 PDB:3OP0 PDBsum:3OP0
ProteinModelPortal:Q9ULV8 SMR:Q9ULV8 IntAct:Q9ULV8 MINT:MINT-247027
STRING:Q9ULV8 PhosphoSite:Q9ULV8 DMDM:125987803 PRIDE:Q9ULV8
DNASU:23624 Ensembl:ENST00000270279 Ensembl:ENST00000341505
GeneID:23624 KEGG:hsa:23624 UCSC:uc002ozs.3 UCSC:uc010ejt.3
CTD:23624 GeneCards:GC19P045281 H-InvDB:HIX0202847 HGNC:HGNC:15961
HPA:CAB008087 MIM:608453 neXtProt:NX_Q9ULV8 PharmGKB:PA26117
eggNOG:NOG318595 InParanoid:Q9ULV8 OMA:HSDSQTC OrthoDB:EOG4P8FJ1
PhylomeDB:Q9ULV8 GenomeRNAi:23624 NextBio:46378 Bgee:Q9ULV8
CleanEx:HS_CBLC Genevestigator:Q9ULV8 GermOnline:ENSG00000142273
GO:GO:0007175 Uniprot:Q9ULV8
Length = 474
Score = 115 (45.5 bits), Expect = 0.00029, P = 0.00029
Identities = 26/78 (33%), Positives = 35/78 (44%)
Query: 37 DGSFFECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNCPVCKANISV 96
D +F C IC +S +D + CGHL C C+ W H Q CP C+ I
Sbjct: 345 DSTFELCKICAESNKDVKIEPCGHLLCSCCLAAWQH---------SDSQTCPFCRCEIKG 395
Query: 97 ASLVPLYGRGGISSASDS 114
V +Y G ++A DS
Sbjct: 396 WEAVSIYQFHGQATAEDS 413
>UNIPROTKB|E5RI62 [details] [associations]
symbol:TRIM17 "E3 ubiquitin-protein ligase TRIM17"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL139288 EMBL:AL670729 HGNC:HGNC:13430
IPI:IPI00975887 ProteinModelPortal:E5RI62 SMR:E5RI62
Ensembl:ENST00000520264 ArrayExpress:E5RI62 Bgee:E5RI62
Uniprot:E5RI62
Length = 50
Score = 92 (37.4 bits), Expect = 0.00037, P = 0.00037
Identities = 16/29 (55%), Positives = 19/29 (65%)
Query: 43 CNICLDSAQDPVVTLCGHLYCWPCIY-KW 70
C+ICLD DPV+T CGH +C CI W
Sbjct: 16 CSICLDYFTDPVMTTCGHNFCRACIQLSW 44
>UNIPROTKB|F1MLM2 [details] [associations]
symbol:HLTF "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016887 "ATPase activity" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR014905 Pfam:PF00176 Pfam:PF00271
Pfam:PF08797 PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184
SMART:SM00490 SMART:SM00910 Prosite:PS00518 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006357 GO:GO:0016887 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004386 InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 OMA:SNWIDQF GeneTree:ENSGT00700000104586
EMBL:DAAA02002705 EMBL:DAAA02002706 IPI:IPI00883352
Ensembl:ENSBTAT00000034508 Uniprot:F1MLM2
Length = 1009
Score = 117 (46.2 bits), Expect = 0.00046, P = 0.00046
Identities = 25/63 (39%), Positives = 36/63 (57%)
Query: 38 GSFFECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNCPVCKANISVA 97
GS EC ICLDS PV+T C H++C PCI + +Q ++ CP+C+ +I
Sbjct: 755 GSDEECAICLDSLMAPVITHCAHVFCKPCICQV--IQN-----EQPHAKCPLCRNDIHGD 807
Query: 98 SLV 100
SL+
Sbjct: 808 SLI 810
>UNIPROTKB|D6RAH9 [details] [associations]
symbol:LNX1 "E3 ubiquitin-protein ligase LNX" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0030165 "PDZ domain
binding" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0051260 "protein homooligomerization" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0051260
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0042787 EMBL:AC058822 EMBL:AC095040
HGNC:HGNC:6657 EMBL:AC124017 IPI:IPI00966985
ProteinModelPortal:D6RAH9 SMR:D6RAH9 Ensembl:ENST00000510143
HOGENOM:HOG000207449 ArrayExpress:D6RAH9 Bgee:D6RAH9 Uniprot:D6RAH9
Length = 99
Score = 91 (37.1 bits), Expect = 0.00048, P = 0.00048
Identities = 23/68 (33%), Positives = 34/68 (50%)
Query: 34 PEKDGSFFECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNCPVCK-A 92
PE+ C+ICL + DP+ T CGH YC C+ +L V+ D + CK +
Sbjct: 32 PEEVDDDLICHICLQALLDPLDTPCGHTYCTLCLTNFL-VEKDFCPMDRKPLVLQHCKKS 90
Query: 93 NISVASLV 100
+I V L+
Sbjct: 91 SILVNKLL 98
>UNIPROTKB|H0Y340 [details] [associations]
symbol:RFWD2 "E3 ubiquitin-protein ligase RFWD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AL359265 EMBL:AL162736
EMBL:AL513329 EMBL:AL590723 HGNC:HGNC:17440 ChiTaRS:RFWD2
Ensembl:ENST00000367667 Uniprot:H0Y340
Length = 113
Score = 91 (37.1 bits), Expect = 0.00048, P = 0.00048
Identities = 23/72 (31%), Positives = 33/72 (45%)
Query: 32 NVPEKDGSFFECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNCPVCK 91
N E + F C IC D ++ +T CGH +C+ CI++ L E CP C
Sbjct: 30 NSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSL----------EDNNRCPKC- 78
Query: 92 ANISVASLVPLY 103
N V ++ LY
Sbjct: 79 -NYVVDNIDHLY 89
>POMBASE|SPCC548.05c [details] [associations]
symbol:SPCC548.05c "ubiquitin-protein ligase E3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISM] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0006368 "transcription elongation
from RNA polymerase II promoter" evidence=ISO] [GO:0008270 "zinc
ion binding" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=ISM] [GO:0034080 "CENP-A containing nucleosome assembly at
centromere" evidence=ISO] [GO:0044732 "mitotic spindle pole body"
evidence=IDA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
PomBase:SPCC548.05c Prosite:PS00518 GO:GO:0005634 EMBL:CU329672
GO:GO:0044732 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006368 GO:GO:0004842 GO:GO:0034080
InterPro:IPR017907 OrthoDB:EOG4R53CF HSSP:Q9CQJ4 eggNOG:NOG260903
RefSeq:NP_587745.1 ProteinModelPortal:Q9P3U8
EnsemblFungi:SPCC548.05c.1 GeneID:2539314 KEGG:spo:SPCC548.05c
NextBio:20800479 Uniprot:Q9P3U8
Length = 468
Score = 113 (44.8 bits), Expect = 0.00049, P = 0.00049
Identities = 28/83 (33%), Positives = 42/83 (50%)
Query: 42 ECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNCPVCKANI----SVA 97
EC IC ++ Q P T CGH YC+ C+ WL ++ ++CP C+ + S A
Sbjct: 84 ECPICTEALQRPFTTHCGHTYCYECLLNWL----------KESKSCPTCRQKLYTQPSPA 133
Query: 98 SLVPLYGRGGISSASDSKKPNLG 120
LV Y + +AS+S P +G
Sbjct: 134 YLV--YEIMNVVAASNSGFPLVG 154
>UNIPROTKB|F1RMN8 [details] [associations]
symbol:TRIM3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR001258
InterPro:IPR001298 InterPro:IPR003649 Pfam:PF01436 PROSITE:PS50089
SMART:SM00184 SMART:SM00502 SMART:SM00557 Prosite:PS00518
GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 InterPro:IPR013017 PROSITE:PS51125
InterPro:IPR017907 GeneTree:ENSGT00550000074377 InterPro:IPR017868
Pfam:PF00630 PROSITE:PS50194 OMA:CESCLQN EMBL:CU972372
Ensembl:ENSSSCT00000015976 Uniprot:F1RMN8
Length = 742
Score = 115 (45.5 bits), Expect = 0.00054, P = 0.00054
Identities = 35/113 (30%), Positives = 54/113 (47%)
Query: 21 KQKWSPTSAPTNVPEKDGSFFECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDA 80
K++ SP+S VP D F C+ICLD + P V C H +C C+ ++ Q+ +L
Sbjct: 3 KREDSPSS---EVPPMDKQFLVCSICLDRYRCPKVLPCLHTFCERCLQNYIPAQSLTL-- 57
Query: 81 DEQQQNCPVCKAN--ISVASLVPLYGRGGISSASDSKK--PNLGEVVPSRPHP 129
+CPVC+ + + L ISS ++ + P+ G P PHP
Sbjct: 58 -----SCPVCRQTSILPEQGVSALQNNFFISSLMEAMQQAPD-GAHDPEGPHP 104
>TAIR|locus:2090827 [details] [associations]
symbol:AT3G26730 "AT3G26730" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0008270
"zinc ion binding" evidence=IEA;ISS] [GO:0007062 "sister chromatid
cohesion" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
EMBL:CP002686 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 HSSP:P38398 EMBL:AB026648
OMA:DIICVRY EMBL:AY074325 EMBL:BT003004 IPI:IPI00546143
RefSeq:NP_189307.2 UniGene:At.5354 ProteinModelPortal:Q9LSE3
SMR:Q9LSE3 IntAct:Q9LSE3 PRIDE:Q9LSE3 EnsemblPlants:AT3G26730.1
GeneID:822285 KEGG:ath:AT3G26730 TAIR:At3g26730
HOGENOM:HOG000083303 InParanoid:Q9LSE3 PhylomeDB:Q9LSE3
ProtClustDB:CLSN2690571 ArrayExpress:Q9LSE3 Genevestigator:Q9LSE3
Uniprot:Q9LSE3
Length = 772
Score = 115 (45.5 bits), Expect = 0.00057, P = 0.00057
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 42 ECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNCPVCKANISVASLVP 101
+C ICL+ P +T CGH++C+PCI ++L + D ++ CP+C IS L
Sbjct: 244 QCPICLEYPLCPQITSCGHIFCFPCILQYLLTGVDNHKVDCFKR-CPLCFVMISPRELYT 302
Query: 102 LY 103
+Y
Sbjct: 303 VY 304
>UNIPROTKB|G4ND35 [details] [associations]
symbol:MGG_00988 "RING-15 protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
EMBL:CM001235 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 RefSeq:XP_003717961.1
ProteinModelPortal:G4ND35 EnsemblFungi:MGG_00988T0 GeneID:2674724
KEGG:mgr:MGG_00988 Uniprot:G4ND35
Length = 670
Score = 114 (45.2 bits), Expect = 0.00062, P = 0.00062
Identities = 22/69 (31%), Positives = 37/69 (53%)
Query: 42 ECNICLDSAQDPVVTLCGHLYCWPCIYKWLH------VQTSSLDADEQQQ--NCPVCKAN 93
+C ICL P + CGH++C PCI +++H V T AD + + CP+C+ +
Sbjct: 188 QCPICLSEPVAPRMAKCGHIFCLPCILRFMHSSSSDDVATPGTGADRRPKWKKCPICEDS 247
Query: 94 ISVASLVPL 102
I + + P+
Sbjct: 248 IYIYEVRPV 256
>UNIPROTKB|A2AAZ3 [details] [associations]
symbol:TRIM39 "E3 ubiquitin-protein ligase TRIM39"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL662832 EMBL:AL662795 EMBL:AL773535
EMBL:BX294158 EMBL:CR759928 EMBL:BX927214 EMBL:CR759281
EMBL:BX248580 HGNC:HGNC:10065 eggNOG:NOG238084 IPI:IPI00790532
SMR:A2AAZ3 Ensembl:ENST00000424074 Ensembl:ENST00000424180
Ensembl:ENST00000428404 Ensembl:ENST00000429069
Ensembl:ENST00000434118 Ensembl:ENST00000434862
Ensembl:ENST00000441470 Uniprot:A2AAZ3
Length = 59
Score = 90 (36.7 bits), Expect = 0.00063, P = 0.00063
Identities = 12/28 (42%), Positives = 20/28 (71%)
Query: 43 CNICLDSAQDPVVTLCGHLYCWPCIYKW 70
C++CL+ ++PV+ CGH +C CI +W
Sbjct: 29 CSVCLEYLKEPVIIECGHNFCKACITRW 56
>UNIPROTKB|H3BPQ8 [details] [associations]
symbol:BFAR "Bifunctional apoptosis regulator" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HGNC:HGNC:17613 EMBL:AC009167
ProteinModelPortal:H3BPQ8 SMR:H3BPQ8 Ensembl:ENST00000563313
Bgee:H3BPQ8 Uniprot:H3BPQ8
Length = 89
Score = 90 (36.7 bits), Expect = 0.00063, P = 0.00063
Identities = 22/85 (25%), Positives = 32/85 (37%)
Query: 7 EPETGYATEEDASLKQKWSPTSAPTNVPEKDGSFFECNICLDSAQDPVVTLCGHLYCWPC 66
EP+ Y D + T +V E F C+ C D +P CGH +C C
Sbjct: 3 EPQKSYVNTMDLERDEPLKSTGPQISVSE-----FSCHCCYDILVNPTTLNCGHSFCRHC 57
Query: 67 IYKWLHVQTSSLDADEQQQNCPVCK 91
+ W A ++ CP C+
Sbjct: 58 LALWW--------ASSKKTECPECR 74
>UNIPROTKB|H3BRQ5 [details] [associations]
symbol:BFAR "Bifunctional apoptosis regulator" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HGNC:HGNC:17613 EMBL:AC009167
Ensembl:ENST00000570219 Bgee:H3BRQ5 Uniprot:H3BRQ5
Length = 109
Score = 90 (36.7 bits), Expect = 0.00063, P = 0.00063
Identities = 22/85 (25%), Positives = 32/85 (37%)
Query: 7 EPETGYATEEDASLKQKWSPTSAPTNVPEKDGSFFECNICLDSAQDPVVTLCGHLYCWPC 66
EP+ Y D + T +V E F C+ C D +P CGH +C C
Sbjct: 3 EPQKSYVNTMDLERDEPLKSTGPQISVSE-----FSCHCCYDILVNPTTLNCGHSFCRHC 57
Query: 67 IYKWLHVQTSSLDADEQQQNCPVCK 91
+ W A ++ CP C+
Sbjct: 58 LALWW--------ASSKKTECPECR 74
>ZFIN|ZDB-GENE-030131-8303 [details] [associations]
symbol:si:ch1073-440b2.1 "si:ch1073-440b2.1"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR003111 InterPro:IPR007110 InterPro:IPR011990
Pfam:PF02190 PROSITE:PS50089 PROSITE:PS50835 SMART:SM00184
Prosite:PS00518 ZFIN:ZDB-GENE-030131-8303 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 GeneTree:ENSGT00440000033329
EMBL:CU459183 EMBL:CU915565 IPI:IPI00836275
Ensembl:ENSDART00000129204 Uniprot:E7EYP4
Length = 488
Score = 112 (44.5 bits), Expect = 0.00068, P = 0.00068
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 37 DGSFFECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNCPVCKANIS 95
D + FEC++C+ +PV T CGH +C C+ + L + NCP+CK N+S
Sbjct: 189 DNADFECSLCMRLFYEPVTTPCGHTFCLKCLERCL----------DHNPNCPLCKENLS 237
>POMBASE|SPBC17A3.10 [details] [associations]
symbol:pas4 "peroxisomal ubiquitin-protein ligase E3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISM] [GO:0005778
"peroxisomal membrane" evidence=ISO] [GO:0005779 "integral to
peroxisomal membrane" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] [GO:0007031 "peroxisome organization"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=ISM]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISM]
InterPro:IPR001841 InterPro:IPR025654 PROSITE:PS50089 SMART:SM00184
PomBase:SPBC17A3.10 Prosite:PS00518 GO:GO:0005783 GO:GO:0046872
EMBL:CU329671 GO:GO:0008270 GO:GO:0007031 GenomeReviews:CU329671_GR
GO:GO:0005779 GO:GO:0005778 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0016558 GO:GO:0004842 InterPro:IPR017907 EMBL:AB004537
eggNOG:COG5574 KO:K13346 PANTHER:PTHR23350 PIR:T39702
RefSeq:NP_595592.1 ProteinModelPortal:Q9UUF0
EnsemblFungi:SPBC17A3.10.1 GeneID:2539774 KEGG:spo:SPBC17A3.10
OrthoDB:EOG44TSJ5 NextBio:20800924 Uniprot:Q9UUF0
Length = 306
Score = 109 (43.4 bits), Expect = 0.00071, P = 0.00071
Identities = 20/61 (32%), Positives = 34/61 (55%)
Query: 42 ECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNCPVCKANISVASLVP 101
+C++C++ P T CGH++CW CI W TS ++ CP+C+A S + ++
Sbjct: 255 KCSLCMEFIHCPAATECGHIFCWSCINGW----TS------KKSECPLCRAFSSPSKIIL 304
Query: 102 L 102
L
Sbjct: 305 L 305
>UNIPROTKB|H7C5K0 [details] [associations]
symbol:HLTF "Helicase-like transcription factor"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50089 PROSITE:PS51194
SMART:SM00184 SMART:SM00490 Prosite:PS00518 GO:GO:0005524
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004386 InterPro:IPR017907
InterPro:IPR014001 PROSITE:PS51192 HGNC:HGNC:11099 EMBL:AC021059
ProteinModelPortal:H7C5K0 Ensembl:ENST00000467858 Bgee:H7C5K0
Uniprot:H7C5K0
Length = 425
Score = 111 (44.1 bits), Expect = 0.00072, P = 0.00072
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 38 GSFFECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNCPVCKANISVA 97
GS EC ICLDS PV+T C H++C PCI + +Q ++ CP+C+ +I
Sbjct: 223 GSDEECAICLDSLTVPVITHCAHVFCKPCICQV--IQN-----EQPHAKCPLCRNDIHED 275
Query: 98 SLV 100
+L+
Sbjct: 276 NLL 278
>UNIPROTKB|F1M010 [details] [associations]
symbol:Rfwd3 "Protein Rfwd3" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF13639 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
RGD:1305243 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 IPI:IPI00948402
Ensembl:ENSRNOT00000067948 ArrayExpress:F1M010 Uniprot:F1M010
Length = 761
Score = 114 (45.2 bits), Expect = 0.00072, P = 0.00072
Identities = 36/106 (33%), Positives = 51/106 (48%)
Query: 7 EPETGYATEEDASLKQK--WSPTSAPTNVPEKDGSFFECNICLD---SAQDPVVTL--CG 59
+ E T DAS K++ P PT V +++G C ICL+ SA D ++ CG
Sbjct: 240 DQEAASVTGGDASPKKQSPQKPIVLPT-VEDEEGE--TCTICLEQWTSAGDHRLSALRCG 296
Query: 60 HLYCWPCIYKWLHVQTSSLDADEQQQNCPVCKANISVASLVPLYGR 105
HL+ + CI+KWL QT + CP C + +V LY R
Sbjct: 297 HLFGYRCIFKWLKGQT---------RKCPQCNKKAKHSDIVVLYAR 333
>RGD|1305243 [details] [associations]
symbol:Rfwd3 "ring finger and WD repeat domain 3" species:10116
"Rattus norvegicus" [GO:0002039 "p53 binding" evidence=ISO]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0010212 "response to ionizing radiation"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0031571 "mitotic G1 DNA damage checkpoint" evidence=ISO]
[GO:0097371 "MDM2/MDM4 family protein binding" evidence=ISO]
InterPro:IPR001841 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF13639 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
RGD:1305243 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0046872 GO:GO:0008270 GO:GO:0010212 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0031571 IPI:IPI00877391
Ensembl:ENSRNOT00000025604 ArrayExpress:F1M055 Uniprot:F1M055
Length = 778
Score = 114 (45.2 bits), Expect = 0.00074, P = 0.00074
Identities = 36/106 (33%), Positives = 51/106 (48%)
Query: 7 EPETGYATEEDASLKQK--WSPTSAPTNVPEKDGSFFECNICLD---SAQDPVVTL--CG 59
+ E T DAS K++ P PT V +++G C ICL+ SA D ++ CG
Sbjct: 257 DQEAASVTGGDASPKKQSPQKPIVLPT-VEDEEGE--TCTICLEQWTSAGDHRLSALRCG 313
Query: 60 HLYCWPCIYKWLHVQTSSLDADEQQQNCPVCKANISVASLVPLYGR 105
HL+ + CI+KWL QT + CP C + +V LY R
Sbjct: 314 HLFGYRCIFKWLKGQT---------RKCPQCNKKAKHSDIVVLYAR 350
>MGI|MGI:2684988 [details] [associations]
symbol:Pex10 "peroxisomal biogenesis factor 10"
species:10090 "Mus musculus" [GO:0005777 "peroxisome" evidence=ISO]
[GO:0005778 "peroxisomal membrane" evidence=ISO] [GO:0005779
"integral to peroxisomal membrane" evidence=ISO] [GO:0007031
"peroxisome organization" evidence=ISO] [GO:0008022 "protein
C-terminus binding" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR025654 PROSITE:PS50089 SMART:SM00184 InterPro:IPR006845
MGI:MGI:2684988 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005779 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0016558
EMBL:CH466594 InterPro:IPR017907 EMBL:AL670413 eggNOG:COG5574
KO:K13346 OMA:FRQRQRA PANTHER:PTHR23350 Pfam:PF04757 CTD:5192
HOGENOM:HOG000180194 HOVERGEN:HBG053568 EMBL:BC147304 EMBL:BC147305
IPI:IPI00676835 RefSeq:NP_001035866.1 UniGene:Mm.133114
ProteinModelPortal:B1AUE5 SMR:B1AUE5 STRING:B1AUE5 PaxDb:B1AUE5
PRIDE:B1AUE5 Ensembl:ENSMUST00000103180 GeneID:668173
KEGG:mmu:668173 UCSC:uc008wcs.1 GeneTree:ENSGT00510000048446
InParanoid:B1AUE5 OrthoDB:EOG4TB4C1 NextBio:434205 Bgee:B1AUE5
Genevestigator:B1AUE5 Uniprot:B1AUE5
Length = 324
Score = 109 (43.4 bits), Expect = 0.00079, P = 0.00079
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 43 CNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNCPVCKANISVASLVPL 102
C +CL+ + T CGHL+CW CI +W + +T CP+C+ LV L
Sbjct: 271 CTLCLEERRHSTATPCGHLFCWECITEWCNTKTE----------CPLCREKFPPQKLVYL 320
>RGD|1591776 [details] [associations]
symbol:Pex10 "peroxisomal biogenesis factor 10" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005777 "peroxisome" evidence=ISO] [GO:0005778 "peroxisomal
membrane" evidence=ISO;IDA] [GO:0005779 "integral to peroxisomal
membrane" evidence=IEA;ISO] [GO:0007031 "peroxisome organization"
evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA;ISO] InterPro:IPR001841
InterPro:IPR025654 PROSITE:PS50089 SMART:SM00184 InterPro:IPR006845
RGD:1591776 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005779 GO:GO:0005778 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0016558 InterPro:IPR017907 EMBL:CH473968 KO:K13346
PANTHER:PTHR23350 Pfam:PF04757 CTD:5192
GeneTree:ENSGT00510000048446 OrthoDB:EOG4TB4C1 IPI:IPI00359803
RefSeq:NP_001102875.1 UniGene:Rn.111 Ensembl:ENSRNOT00000036819
GeneID:680424 KEGG:rno:680424 NextBio:718678 Uniprot:D3ZC81
Length = 324
Score = 109 (43.4 bits), Expect = 0.00079, P = 0.00079
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 43 CNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNCPVCKANISVASLVPL 102
C +CL+ + T CGHL+CW CI +W + +T CP+C+ LV L
Sbjct: 271 CTLCLEERRHSTATPCGHLFCWECITEWCNTKTE----------CPLCREKFPPQKLVYL 320
>UNIPROTKB|D6RB76 [details] [associations]
symbol:LNX1 "E3 ubiquitin-protein ligase LNX" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0030165 "PDZ domain
binding" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0051260 "protein homooligomerization" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0051260
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0042787 EMBL:AC058822 EMBL:AC095040
HGNC:HGNC:6657 EMBL:AC124017 IPI:IPI00967553
ProteinModelPortal:D6RB76 SMR:D6RB76 Ensembl:ENST00000512247
ArrayExpress:D6RB76 Bgee:D6RB76 Uniprot:D6RB76
Length = 90
Score = 89 (36.4 bits), Expect = 0.00081, P = 0.00081
Identities = 20/58 (34%), Positives = 28/58 (48%)
Query: 34 PEKDGSFFECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNCPVCK 91
PE+ C+ICL + DP+ T CGH YC C+ +L V+ D + CK
Sbjct: 32 PEEVDDDLICHICLQALLDPLDTPCGHTYCTLCLTNFL-VEKDFCPMDRKPLVLQHCK 88
>UNIPROTKB|J3QRK3 [details] [associations]
symbol:TRIM37 "E3 ubiquitin-protein ligase TRIM37"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC099850 EMBL:AC100832 HGNC:HGNC:7523 ChiTaRS:TRIM37
EMBL:AC005207 EMBL:AC036154 ProteinModelPortal:J3QRK3
Ensembl:ENST00000584889 Uniprot:J3QRK3
Length = 103
Score = 89 (36.4 bits), Expect = 0.00081, P = 0.00081
Identities = 21/67 (31%), Positives = 31/67 (46%)
Query: 35 EKDGSFFECNICLDSAQDP-VVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNCPVCKAN 93
E F C IC++ +D + C L C+ CI +WL EQ+ CP C+A
Sbjct: 7 ESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWL---------TEQRAQCPHCRAP 57
Query: 94 ISVASLV 100
+ + LV
Sbjct: 58 LQLRELV 64
>UNIPROTKB|J3QSH5 [details] [associations]
symbol:TRIM37 "E3 ubiquitin-protein ligase TRIM37"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC099850 EMBL:AC100832 HGNC:HGNC:7523 ChiTaRS:TRIM37
EMBL:AC005207 EMBL:AC036154 Ensembl:ENST00000580122 Uniprot:J3QSH5
Length = 113
Score = 89 (36.4 bits), Expect = 0.00081, P = 0.00081
Identities = 21/67 (31%), Positives = 31/67 (46%)
Query: 35 EKDGSFFECNICLDSAQDP-VVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNCPVCKAN 93
E F C IC++ +D + C L C+ CI +WL EQ+ CP C+A
Sbjct: 7 ESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWL---------TEQRAQCPHCRAP 57
Query: 94 ISVASLV 100
+ + LV
Sbjct: 58 LQLRELV 64
>POMBASE|SPCC970.10c [details] [associations]
symbol:brl2 "ubiquitin-protein ligase E3 Brl2"
species:4896 "Schizosaccharomyces pombe" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005721 "centromeric
heterochromatin" evidence=IDA] [GO:0006336 "DNA
replication-independent nucleosome assembly" evidence=TAS]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEP] [GO:0008270 "zinc ion binding"
evidence=ISM] [GO:0031497 "chromatin assembly" evidence=IMP]
[GO:0033503 "HULC complex" evidence=IDA] [GO:0051569 "regulation of
histone H3-K4 methylation" evidence=IMP] [GO:0071894 "histone H2B
conserved C-terminal lysine ubiquitination" evidence=IDA;IMP]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 PomBase:SPCC970.10c Pfam:PF00097
Prosite:PS00518 GO:GO:0005634 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0006357
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005721 GO:GO:0004842
InterPro:IPR017907 GO:GO:0006336 eggNOG:NOG263074 KO:K10696
GO:GO:0033503 InterPro:IPR013956 Pfam:PF08647 OrthoDB:EOG4QVGND
GO:GO:0071894 GO:GO:0051569 PIR:T41670 RefSeq:NP_587845.1
ProteinModelPortal:O74563 IntAct:O74563 STRING:O74563
EnsemblFungi:SPCC970.10c.1 GeneID:2539307 KEGG:spo:SPCC970.10c
OMA:IMERENA NextBio:20800473 Uniprot:O74563
Length = 680
Score = 113 (44.8 bits), Expect = 0.00081, P = 0.00081
Identities = 24/92 (26%), Positives = 47/92 (51%)
Query: 15 EEDASLKQKWSPTSAPTNVPEKDG--SFFECNIC-LDSAQDPVVTLCGHLYCWPCIYKWL 71
EE K+K T T+ E + +C++C + +D +++LCGH +C+ CI K
Sbjct: 597 EEHEKEKRKLKDTGVSTSAEELKTFRAMCKCSVCNFERWKDRIISLCGHGFCYQCIQK-- 654
Query: 72 HVQTSSLDADEQQQNCPVCKANISVASLVPLY 103
++T +Q+ CP+C + ++P++
Sbjct: 655 RIET-------RQRRCPICGRGFGASDVIPIH 679
>ZFIN|ZDB-GENE-070912-126 [details] [associations]
symbol:ftr16 "finTRIM family, member 16"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-070912-126 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00670000097622 EMBL:CR457482 IPI:IPI00633084
RefSeq:XP_690796.5 Ensembl:ENSDART00000056164 GeneID:562315
Uniprot:F1Q5D7
Length = 558
Score = 112 (44.5 bits), Expect = 0.00083, P = 0.00083
Identities = 22/53 (41%), Positives = 30/53 (56%)
Query: 41 FECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQ--NCPVCK 91
F C++CLD +DPV CGH YC CI + D DEQ++ +CP C+
Sbjct: 13 FSCSVCLDLLKDPVTIPCGHSYCMSCI-------SGCWDQDEQKRVYSCPQCR 58
>UNIPROTKB|F1MK05 [details] [associations]
symbol:RNF170 "E3 ubiquitin-protein ligase RNF170"
species:9913 "Bos taurus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
GO:GO:0005789 GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:DAAA02060959 IPI:IPI00699368
UniGene:Bt.78246 Ensembl:ENSBTAT00000047188
GeneTree:ENSGT00390000017123 OMA:DMSCPVC InterPro:IPR010652
Pfam:PF06803 Uniprot:F1MK05
Length = 259
Score = 107 (42.7 bits), Expect = 0.00085, P = 0.00085
Identities = 28/85 (32%), Positives = 44/85 (51%)
Query: 21 KQKWSPTSAPTNVPEKDGSFFECNICLDSAQDPVVTLCGHLYCWPCIYK-WLHVQTSSLD 79
+Q + AP ++ + C ICL A PV T CGHL+C CI W + S L
Sbjct: 66 EQLQTEQDAPAAARQQFYTDMYCPICLHQASLPVETNCGHLFCGTCIVAYWRY--GSWLG 123
Query: 80 ADEQQQNCPVCKANISVASLVPLYG 104
A +CP+C+ +++ L+P++G
Sbjct: 124 AI----SCPICRQTVTL--LLPVFG 142
>UNIPROTKB|G3MYU5 [details] [associations]
symbol:RFWD3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00390000008931 EMBL:DAAA02045981
Ensembl:ENSBTAT00000066130 Uniprot:G3MYU5
Length = 773
Score = 113 (44.8 bits), Expect = 0.00096, P = 0.00096
Identities = 32/89 (35%), Positives = 45/89 (50%)
Query: 22 QKWSPTSAPTNVPEKDGSFFECNICLD---SAQDP-VVTL-CGHLYCWPCIYKWLHVQTS 76
QK +P+ +V E++G C ICL+ +A D + TL CGHL+ + CI KWL QT
Sbjct: 270 QKSNPSLTSASVDEEEGD--TCTICLEQWTNAGDHRLSTLRCGHLFGYKCISKWLRGQT- 326
Query: 77 SLDADEQQQNCPVCKANISVASLVPLYGR 105
+ CP C + +V LY R
Sbjct: 327 --------RKCPQCNKKAKQSDIVVLYAR 347
>UNIPROTKB|F1MAV6 [details] [associations]
symbol:RFWD3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0097371 "MDM2/MDM4 family protein binding"
evidence=IEA] [GO:0031571 "mitotic G1 DNA damage checkpoint"
evidence=IEA] [GO:0010212 "response to ionizing radiation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0002039 "p53
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0046872 GO:GO:0008270 GO:GO:0010212
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0031571
OMA:QERMKSS GeneTree:ENSGT00390000008931 EMBL:DAAA02045981
IPI:IPI00707159 Ensembl:ENSBTAT00000005847 Uniprot:F1MAV6
Length = 782
Score = 113 (44.8 bits), Expect = 0.00097, P = 0.00097
Identities = 32/89 (35%), Positives = 45/89 (50%)
Query: 22 QKWSPTSAPTNVPEKDGSFFECNICLD---SAQDP-VVTL-CGHLYCWPCIYKWLHVQTS 76
QK +P+ +V E++G C ICL+ +A D + TL CGHL+ + CI KWL QT
Sbjct: 279 QKSNPSLTSASVDEEEGD--TCTICLEQWTNAGDHRLSTLRCGHLFGYKCISKWLRGQT- 335
Query: 77 SLDADEQQQNCPVCKANISVASLVPLYGR 105
+ CP C + +V LY R
Sbjct: 336 --------RKCPQCNKKAKQSDIVVLYAR 356
>ZFIN|ZDB-GENE-030616-180 [details] [associations]
symbol:si:busm1-163l24.4 "si:busm1-163l24.4"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
ZFIN:ZDB-GENE-030616-180 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
eggNOG:KOG2177 EMBL:AL591669 IPI:IPI00501631 RefSeq:NP_001005315.1
UniGene:Dr.114263 ProteinModelPortal:Q8AW62 STRING:Q8AW62
GeneID:368754 KEGG:dre:368754 InParanoid:Q8AW62 NextBio:20813157
Uniprot:Q8AW62
Length = 278
Score = 107 (42.7 bits), Expect = 0.00099, P = 0.00099
Identities = 23/55 (41%), Positives = 27/55 (49%)
Query: 41 FECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNCPVCKANIS 95
F C ICLD+ +DPV CGH YC CI K + S D CP C+ S
Sbjct: 12 FTCPICLDALKDPVTIPCGHNYCMSCI-KHYWEKNGSRDTG---YTCPECRKTFS 62
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.131 0.406 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 260 220 0.00094 112 3 11 22 0.40 33
32 0.40 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 85
No. of states in DFA: 605 (64 KB)
Total size of DFA: 191 KB (2109 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.33u 0.07s 18.40t Elapsed: 00:00:01
Total cpu time: 18.33u 0.07s 18.40t Elapsed: 00:00:01
Start: Sat May 11 08:27:35 2013 End: Sat May 11 08:27:36 2013