Your job contains 1 sequence.
>024947
MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR
VTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHV
GDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL
KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
RRTGRLRGQAAATAAKADKA
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 024947
(260 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2122189 - symbol:AT4G36130 species:3702 "Arabi... 1223 1.9e-124 1
TAIR|locus:2060917 - symbol:EMB2296 "embryo defective 229... 1216 1.0e-123 1
TAIR|locus:2080968 - symbol:AT3G51190 species:3702 "Arabi... 1111 1.4e-112 1
FB|FBgn0261602 - symbol:RpL8 "Ribosomal protein L8" speci... 940 1.8e-94 1
UNIPROTKB|F1NIX0 - symbol:RPL8 "Uncharacterized protein" ... 927 4.3e-93 1
UNIPROTKB|Q3T0S6 - symbol:RPL8 "60S ribosomal protein L8"... 924 9.0e-93 1
UNIPROTKB|E2RIA8 - symbol:RPL8 "Uncharacterized protein" ... 924 9.0e-93 1
UNIPROTKB|P62917 - symbol:RPL8 "60S ribosomal protein L8"... 924 9.0e-93 1
UNIPROTKB|F2Z567 - symbol:RPL8 "Uncharacterized protein" ... 924 9.0e-93 1
MGI|MGI:1350927 - symbol:Rpl8 "ribosomal protein L8" spec... 924 9.0e-93 1
RGD|619827 - symbol:Rpl8 "ribosomal protein L8" species:1... 924 9.0e-93 1
DICTYBASE|DDB_G0274113 - symbol:rpl8 "60S ribosomal prote... 922 1.5e-92 1
ZFIN|ZDB-GENE-040426-1670 - symbol:rpl8 "ribosomal protei... 917 5.0e-92 1
RGD|1561333 - symbol:RGD1561333 "similar to 60S ribosomal... 904 1.2e-90 1
WB|WBGene00004413 - symbol:rpl-2 species:6239 "Caenorhabd... 904 1.2e-90 1
POMBASE|SPAC1F7.13c - symbol:rpl801 "60S ribosomal protei... 889 4.6e-89 1
POMBASE|SPBC2F12.07c - symbol:rpl802 "60S ribosomal prote... 889 4.6e-89 1
POMBASE|SPBC839.04 - symbol:rpl803 "60S ribosomal protein... 889 4.6e-89 1
UNIPROTKB|E1BHY4 - symbol:E1BHY4 "Uncharacterized protein... 881 3.2e-88 1
SGD|S000002104 - symbol:RPL2A "Ribosomal 60S subunit prot... 874 1.8e-87 1
SGD|S000001280 - symbol:RPL2B "Ribosomal 60S subunit prot... 874 1.8e-87 1
ASPGD|ASPL0000046534 - symbol:AN2275 species:162425 "Emer... 870 4.7e-87 1
GENEDB_PFALCIPARUM|PFE0845c - symbol:PFE0845c "60S riboso... 862 3.3e-86 1
UNIPROTKB|Q8I3T9 - symbol:PFE0845c "60S ribosomal protein... 862 3.3e-86 1
UNIPROTKB|E9PIZ3 - symbol:RPL8 "60S ribosomal protein L8"... 617 8.5e-77 2
UNIPROTKB|K7GLA0 - symbol:RPL8 "Uncharacterized protein" ... 617 8.5e-77 2
UNIPROTKB|E9PKZ0 - symbol:RPL8 "60S ribosomal protein L8"... 773 9.0e-77 1
UNIPROTKB|K7GSL7 - symbol:RPL8 "Uncharacterized protein" ... 620 4.7e-70 2
UNIPROTKB|K7GRF2 - symbol:RPL8 "Uncharacterized protein" ... 632 7.9e-62 1
UNIPROTKB|G3V1A1 - symbol:RPL8 "Ribosomal protein L8, iso... 602 1.2e-58 1
UNIPROTKB|E9PP36 - symbol:RPL8 "60S ribosomal protein L8"... 357 8.7e-51 2
UNIPROTKB|K7GST6 - symbol:RPL8 "Uncharacterized protein" ... 357 8.7e-51 2
UNIPROTKB|K7GQ66 - symbol:RPL8 "Uncharacterized protein" ... 355 9.8e-50 2
UNIPROTKB|E9PKU4 - symbol:RPL8 "60S ribosomal protein L8"... 506 1.8e-48 1
UNIPROTKB|K7GNY4 - symbol:RPL8 "Uncharacterized protein" ... 506 1.8e-48 1
UNIPROTKB|F1LU36 - symbol:F1LU36 "Uncharacterized protein... 422 1.4e-39 1
UNIPROTKB|K7GNM9 - symbol:RPL8 "Uncharacterized protein" ... 334 3.0e-30 1
UNIPROTKB|P60422 - symbol:rplB species:83333 "Escherichia... 277 3.3e-24 1
TIGR_CMR|SO_0234 - symbol:SO_0234 "ribosomal protein L2" ... 266 4.8e-23 1
TIGR_CMR|BA_0113 - symbol:BA_0113 "ribosomal protein L2" ... 264 7.8e-23 1
TIGR_CMR|GSU_2854 - symbol:GSU_2854 "ribosomal protein L2... 261 1.6e-22 1
TIGR_CMR|ECH_0412 - symbol:ECH_0412 "ribosomal protein L2... 260 2.1e-22 1
GENEDB_PFALCIPARUM|PF11_0337 - symbol:PF11_0337 "50S ribo... 257 4.3e-22 1
UNIPROTKB|P0C495 - symbol:rpl2-A "50S ribosomal protein L... 257 4.3e-22 1
UNIPROTKB|P0C496 - symbol:rpl2-A "50S ribosomal protein L... 257 4.3e-22 1
UNIPROTKB|P0C497 - symbol:rpl2-A "50S ribosomal protein L... 257 4.3e-22 1
UNIPROTKB|Q6EN83 - symbol:rpl2-A "50S ribosomal protein L... 257 4.3e-22 1
UNIPROTKB|Q8II37 - symbol:PF11_0337 "Mitochondrial riboso... 257 4.3e-22 1
TIGR_CMR|APH_0283 - symbol:APH_0283 "ribosomal protein L2... 255 7.0e-22 1
TIGR_CMR|SPO_0484 - symbol:SPO_0484 "ribosomal protein L2... 253 1.1e-21 1
TIGR_CMR|CBU_0241 - symbol:CBU_0241 "ribosomal protein L2... 252 1.5e-21 1
TIGR_CMR|CPS_0870 - symbol:CPS_0870 "ribosomal protein L2... 249 3.0e-21 1
UNIPROTKB|Q9KNY7 - symbol:rplB "50S ribosomal protein L2"... 248 3.9e-21 1
TIGR_CMR|VC_2593 - symbol:VC_2593 "ribosomal protein L2" ... 248 3.9e-21 1
TIGR_CMR|CHY_2306 - symbol:CHY_2306 "ribosomal protein L2... 246 6.3e-21 1
TIGR_CMR|NSE_0269 - symbol:NSE_0269 "ribosomal protein L2... 242 1.7e-20 1
UNIPROTKB|P95052 - symbol:rplB "50S ribosomal protein L2"... 239 3.5e-20 1
UNIPROTKB|P0C8K6 - symbol:RPL2 "60S ribosomal protein L2,... 217 1.2e-19 2
UNIPROTKB|P92812 - symbol:RPL2 "60S ribosomal protein L2,... 217 1.2e-19 2
UNIPROTKB|Q2F969 - symbol:RPL2 "60S ribosomal protein L2,... 217 1.2e-19 2
TIGR_CMR|DET_0477 - symbol:DET_0477 "ribosomal protein L2... 234 1.2e-19 1
UNIPROTKB|Q9L0D7 - symbol:rplB "50S ribosomal protein L2"... 225 1.1e-18 1
TIGR_CMR|CJE_1872 - symbol:CJE_1872 "ribosomal protein L2... 225 1.1e-18 1
UNIPROTKB|Q9AMK8 - symbol:rplB "50S ribosomal protein L2"... 216 9.5e-18 1
CGD|CAL0005205 - symbol:orf19.5420 species:5476 "Candida ... 207 2.2e-16 1
TAIR|locus:505006316 - symbol:AT2G44065 species:3702 "Ara... 198 7.7e-16 1
SGD|S000000776 - symbol:RML2 "Mitochondrial ribosomal pro... 166 4.4e-14 2
UNIPROTKB|K7GMQ4 - symbol:RPL8 "Uncharacterized protein" ... 179 7.9e-14 1
DICTYBASE|DDB_G0294036 - symbol:mrpl2 "ribosomal protein ... 174 4.8e-13 1
ASPGD|ASPL0000011317 - symbol:AN3649 species:162425 "Emer... 107 4.3e-12 3
UNIPROTKB|F1NY85 - symbol:MRPL2 "Uncharacterized protein"... 168 1.1e-11 1
POMBASE|SPCC16C4.15 - symbol:rml2 "mitochondrial ribosoma... 147 2.0e-10 2
UNIPROTKB|K7GL68 - symbol:RPL8 "Uncharacterized protein" ... 146 3.0e-10 1
RGD|1307147 - symbol:Mrpl2 "mitochondrial ribosomal prote... 130 2.9e-06 1
UNIPROTKB|Q498T4 - symbol:Mrpl2 "39S ribosomal protein L2... 130 2.9e-06 1
UNIPROTKB|E2RCD7 - symbol:MRPL2 "Uncharacterized protein"... 130 2.9e-06 1
UNIPROTKB|Q5T653 - symbol:MRPL2 "39S ribosomal protein L2... 129 3.9e-06 1
UNIPROTKB|F1RRN2 - symbol:MRPL2 "Uncharacterized protein"... 129 3.9e-06 1
MGI|MGI:1351622 - symbol:Mrpl2 "mitochondrial ribosomal p... 127 6.7e-06 1
UNIPROTKB|Q2TA12 - symbol:MRPL2 "39S ribosomal protein L2... 125 1.2e-05 1
ZFIN|ZDB-GENE-050809-12 - symbol:im:6908224 "im:6908224" ... 122 2.4e-05 1
>TAIR|locus:2122189 [details] [associations]
symbol:AT4G36130 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0005773 "vacuole" evidence=IDA]
[GO:0022626 "cytosolic ribosome" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IDA] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 InterPro:IPR023672
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
GO:GO:0005886 GO:GO:0005773 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0006412 GO:GO:0003723 EMBL:AL161588 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 EMBL:AL022141
EMBL:AL022373 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 GO:GO:0022625 KO:K02938
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
eggNOG:COG0090 HOGENOM:HOG000232983 ProtClustDB:CLSN2683927
EMBL:AF361610 EMBL:AF367335 EMBL:AY058221 EMBL:Z25971
IPI:IPI00523186 PIR:T04582 RefSeq:NP_195336.1 UniGene:At.2119
UniGene:At.72399 ProteinModelPortal:Q42064 SMR:Q42064 STRING:Q42064
PaxDb:Q42064 PRIDE:Q42064 EnsemblPlants:AT4G36130.1 GeneID:829770
KEGG:ath:AT4G36130 GeneFarm:407 TAIR:At4g36130 InParanoid:Q42064
OMA:DNDTSRI PhylomeDB:Q42064 Genevestigator:Q42064
GermOnline:AT4G36130 Uniprot:Q42064
Length = 258
Score = 1223 (435.6 bits), Expect = 1.9e-124, P = 1.9e-124
Identities = 221/238 (92%), Positives = 235/238 (98%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 60
MGRVIRAQRKGAGSVFKSHTHHRKGPA+FRSLDFGERNGYLKGV+TEIIHDPGRGAPLAR
Sbjct: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60
Query: 61 VTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
V FRHPFR++ QKELFVAAEGMYTGQF+YCG+KATLVVGNVLPLRSIPEGAV+CNVEHHV
Sbjct: 61 VAFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVICNVEHHV 120
Query: 121 GDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
GDRGVFAR SGDYA+VI+HNPDNDT+RIKLPSG+KKIVPSGCRAMIGQVAGGGRTEKP+L
Sbjct: 121 GDRGVFARASGDYAIVIAHNPDNDTSRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPML 180
Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 238
KAGNAYHK+RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPG+KVGLI
Sbjct: 181 KAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGKKVGLI 238
>TAIR|locus:2060917 [details] [associations]
symbol:EMB2296 "embryo defective 2296" species:3702
"Arabidopsis thaliana" [GO:0003735 "structural constituent of
ribosome" evidence=IEA;ISS] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840
"ribosome" evidence=IEA;ISS] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005773 "vacuole" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0022626 "cytosolic ribosome" evidence=IDA]
[GO:0005774 "vacuolar membrane" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=RCA] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 InterPro:IPR023672
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
GO:GO:0005886 GO:GO:0005774 GO:GO:0009507 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005730 GO:GO:0006412 GO:GO:0003723
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 EMBL:AC006201
InterPro:IPR008991 SUPFAM:SSF50104 GO:GO:0022625 KO:K02938
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
eggNOG:COG0090 HOGENOM:HOG000232983 OMA:GRVIRNQ EMBL:X86765
EMBL:AY128314 EMBL:BT001177 IPI:IPI00517953 PIR:C84559
RefSeq:NP_179393.1 UniGene:At.24098 UniGene:At.74928
ProteinModelPortal:P46286 SMR:P46286 IntAct:P46286 STRING:P46286
PaxDb:P46286 PRIDE:P46286 EnsemblPlants:AT2G18020.1 GeneID:816314
KEGG:ath:AT2G18020 GeneFarm:405 TAIR:At2g18020 InParanoid:P46286
PhylomeDB:P46286 ProtClustDB:CLSN2683927 Genevestigator:P46286
GermOnline:AT2G18020 Uniprot:P46286
Length = 258
Score = 1216 (433.1 bits), Expect = 1.0e-123, P = 1.0e-123
Identities = 222/238 (93%), Positives = 234/238 (98%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 60
MGRVIRAQRKGAGSVFKSHTHHRKGPA+FRSLDFGERNGYLKGV+TEIIHDPGRGAPLAR
Sbjct: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60
Query: 61 VTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
VTFRHPFR++ QKELFVAAEGMYTGQF+YCG+KATLVVGNVLPLRSIPEGAVVCNVEHHV
Sbjct: 61 VTFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
Query: 121 GDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
GDRGV AR SGDYA+VI+HNPD+DTTRIKLPSG+KKIVPSGCRAMIGQVAGGGRTEKP+L
Sbjct: 121 GDRGVLARASGDYAIVIAHNPDSDTTRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPML 180
Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 238
KAGNAYHK+RVKRN WPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI
Sbjct: 181 KAGNAYHKYRVKRNSWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 238
>TAIR|locus:2080968 [details] [associations]
symbol:AT3G51190 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0022626 "cytosolic ribosome"
evidence=IDA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IDA] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 InterPro:IPR023672
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006412 GO:GO:0003723
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
EMBL:AL132980 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 GO:GO:0022625 KO:K02938
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
eggNOG:COG0090 HOGENOM:HOG000232983 ProtClustDB:CLSN2683927
EMBL:DQ056619 IPI:IPI00528587 PIR:T45750 RefSeq:NP_190687.2
UniGene:At.53884 ProteinModelPortal:Q4PSL7 SMR:Q4PSL7 STRING:Q4PSL7
PaxDb:Q4PSL7 PRIDE:Q4PSL7 EnsemblPlants:AT3G51190.1 GeneID:824282
KEGG:ath:AT3G51190 GeneFarm:406 TAIR:At3g51190 InParanoid:Q4PSL7
OMA:IACGISA Genevestigator:Q4PSL7 GermOnline:AT3G51190
Uniprot:Q4PSL7
Length = 260
Score = 1111 (396.2 bits), Expect = 1.4e-112, P = 1.4e-112
Identities = 202/239 (84%), Positives = 221/239 (92%)
Query: 1 MGRVIRAQRKGA-GSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLA 59
MGRVIRAQRKGA GSVFKSHTHHRKGPA+FRSLD+GERNGYLKG++TEIIHDPGRGAPLA
Sbjct: 1 MGRVIRAQRKGAAGSVFKSHTHHRKGPAKFRSLDYGERNGYLKGLVTEIIHDPGRGAPLA 60
Query: 60 RVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHH 119
RV FRHPFRY QKELFVAAEGMYTGQ++YCG+KA L+VGNVLPL SIPEGAV+CNVE H
Sbjct: 61 RVAFRHPFRYMKQKELFVAAEGMYTGQYLYCGKKANLMVGNVLPLGSIPEGAVICNVELH 120
Query: 120 VGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPL 179
VGDRG AR SGDYA+VI+HNP+++TTR+KLPSG+KKI+PS CRAMIGQVAGGGRTEKPL
Sbjct: 121 VGDRGALARASGDYAIVIAHNPESNTTRVKLPSGSKKILPSACRAMIGQVAGGGRTEKPL 180
Query: 180 LKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 238
LKAGNAYHK++ KRNCWP VRGVAMNPVEHPHGGGNHQHIGHASTVRRD G KVG I
Sbjct: 181 LKAGNAYHKYKAKRNCWPVVRGVAMNPVEHPHGGGNHQHIGHASTVRRDKSAGAKVGQI 239
>FB|FBgn0261602 [details] [associations]
symbol:RpL8 "Ribosomal protein L8" species:7227 "Drosophila
melanogaster" [GO:0006412 "translation" evidence=ISS] [GO:0003735
"structural constituent of ribosome" evidence=ISS;IDA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISS] [GO:0005840
"ribosome" evidence=IDA] [GO:0000022 "mitotic spindle elongation"
evidence=IMP] [GO:0007052 "mitotic spindle organization"
evidence=IMP] [GO:0008286 "insulin receptor signaling pathway"
evidence=IGI] [GO:0048749 "compound eye development" evidence=IMP]
[GO:0008361 "regulation of cell size" evidence=IMP] [GO:0051298
"centrosome duplication" evidence=IMP] InterPro:IPR002171
InterPro:IPR022666 InterPro:IPR022669 InterPro:IPR022671
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
EMBL:AE014296 GO:GO:0051298 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0019843 GO:GO:0000022 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 KO:K02938 Gene3D:4.10.950.10
InterPro:IPR014726 PANTHER:PTHR13691 eggNOG:COG0090
GeneTree:ENSGT00390000009907 OMA:GRVIRNQ CTD:6132 EMBL:AF098520
EMBL:AY071342 EMBL:BT014913 RefSeq:NP_524726.1 RefSeq:NP_728756.1
UniGene:Dm.6647 ProteinModelPortal:Q9V3G1 SMR:Q9V3G1
MINT:MINT-290075 STRING:Q9V3G1 PaxDb:Q9V3G1 PRIDE:Q9V3G1
EnsemblMetazoa:FBtr0072924 EnsemblMetazoa:FBtr0072925 GeneID:44251
KEGG:dme:Dmel_CG1263 FlyBase:FBgn0261602 InParanoid:Q9V3G1
OrthoDB:EOG4W3R3V PhylomeDB:Q9V3G1 ChiTaRS:RPL8 GenomeRNAi:44251
NextBio:837015 Bgee:Q9V3G1 GermOnline:CG1263 Uniprot:Q9V3G1
Length = 256
Score = 940 (336.0 bits), Expect = 1.8e-94, P = 1.8e-94
Identities = 171/238 (71%), Positives = 200/238 (84%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 60
MGRVIRAQRKGAGSVFK+H RKG A+ RSLDF ER+GY++GV+ +IIHDPGRGAPLA
Sbjct: 1 MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAV 60
Query: 61 VTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
V FR P+RY+ +KELF+A EGM+TGQFVYCGRKATL +GNV+PL +PEG ++CN+E
Sbjct: 61 VHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKT 120
Query: 121 GDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
GDRG AR SG+YA VI+HN D TR+KLPSGAKK+VPS RAM+G VAGGGR +KP+L
Sbjct: 121 GDRGRLARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIVAGGGRIDKPIL 180
Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 238
KAG AYHK++VKRN WPKVRGVAMNPVEHPHGGGNHQHIG ASTV+R G+KVGLI
Sbjct: 181 KAGRAYHKYKVKRNSWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLI 238
>UNIPROTKB|F1NIX0 [details] [associations]
symbol:RPL8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IEA] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 InterPro:IPR023672
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104 GO:GO:0022625
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
GeneTree:ENSGT00390000009907 OMA:GRVIRNQ HAMAP:MF_01320_A
EMBL:AADN02011032 IPI:IPI00590272 Ensembl:ENSGALT00000026174
Uniprot:F1NIX0
Length = 269
Score = 927 (331.4 bits), Expect = 4.3e-93, P = 4.3e-93
Identities = 161/238 (67%), Positives = 202/238 (84%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 60
MGRVIR QRKGAGSVF++H HRKGPA+ R++DF ER+GY+KG++ +IIHDPGRGAPLA+
Sbjct: 13 MGRVIRGQRKGAGSVFRAHVKHRKGPAKLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 72
Query: 61 VTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
+ FR P+R++ + ELF+AAEG++TGQFVYCG+KA L +GNVLP+ ++PEG +VC +E
Sbjct: 73 IAFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 132
Query: 121 GDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
GDRG AR SG+YA VISHNP+ TR+KLPSG+KK++ S RA++G VAGGGR +KP+L
Sbjct: 133 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGIVAGGGRIDKPIL 192
Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 238
KAG AYHK++ KRNCWP+VRGVAMNPVEHP GGGNHQHIG ST+RRDAP G+KVGLI
Sbjct: 193 KAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLI 250
>UNIPROTKB|Q3T0S6 [details] [associations]
symbol:RPL8 "60S ribosomal protein L8" species:9913 "Bos
taurus" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 InterPro:IPR023672
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0019843 GO:GO:0015934 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104 KO:K02938
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
eggNOG:COG0090 GeneTree:ENSGT00390000009907 HOGENOM:HOG000232983
OMA:GRVIRNQ EMBL:BC102277 EMBL:BC151407 IPI:IPI00698077
RefSeq:NP_001029797.1 UniGene:Bt.48839 ProteinModelPortal:Q3T0S6
SMR:Q3T0S6 STRING:Q3T0S6 PRIDE:Q3T0S6 Ensembl:ENSBTAT00000037367
GeneID:535056 KEGG:bta:535056 CTD:6132 HOVERGEN:HBG079431
InParanoid:Q3T0S6 OrthoDB:EOG4XKV7P NextBio:20876611 Uniprot:Q3T0S6
Length = 257
Score = 924 (330.3 bits), Expect = 9.0e-93, P = 9.0e-93
Identities = 162/238 (68%), Positives = 201/238 (84%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 60
MGRVIR QRKGAGSVF++H HRKG AR R++DF ER+GY+KG++ +IIHDPGRGAPLA+
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 61 VTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
V FR P+R++ + ELF+AAEG++TGQFVYCG+KA L +GNVLP+ ++PEG +VC +E
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 121 GDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
GDRG AR SG+YA VISHNP+ TR+KLPSG+KK++ S RA++G VAGGGR +KP+L
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPIL 180
Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 238
KAG AYHK++ KRNCWP+VRGVAMNPVEHP GGGNHQHIG ST+RRDAP G+KVGLI
Sbjct: 181 KAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLI 238
>UNIPROTKB|E2RIA8 [details] [associations]
symbol:RPL8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 InterPro:IPR023672
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104 GO:GO:0022625
KO:K02938 Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
GeneTree:ENSGT00390000009907 OMA:GRVIRNQ CTD:6132 EMBL:AAEX03008983
RefSeq:XP_858496.1 ProteinModelPortal:E2RIA8 SMR:E2RIA8
PRIDE:E2RIA8 Ensembl:ENSCAFT00000002627 GeneID:475130
KEGG:cfa:475130 NextBio:20851021 HAMAP:MF_01320_A Uniprot:E2RIA8
Length = 257
Score = 924 (330.3 bits), Expect = 9.0e-93, P = 9.0e-93
Identities = 162/238 (68%), Positives = 201/238 (84%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 60
MGRVIR QRKGAGSVF++H HRKG AR R++DF ER+GY+KG++ +IIHDPGRGAPLA+
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 61 VTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
V FR P+R++ + ELF+AAEG++TGQFVYCG+KA L +GNVLP+ ++PEG +VC +E
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 121 GDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
GDRG AR SG+YA VISHNP+ TR+KLPSG+KK++ S RA++G VAGGGR +KP+L
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPIL 180
Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 238
KAG AYHK++ KRNCWP+VRGVAMNPVEHP GGGNHQHIG ST+RRDAP G+KVGLI
Sbjct: 181 KAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLI 238
>UNIPROTKB|P62917 [details] [associations]
symbol:RPL8 "60S ribosomal protein L8" species:9606 "Homo
sapiens" [GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412
"translation" evidence=NAS;TAS] [GO:0003735 "structural constituent
of ribosome" evidence=NAS] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IDA] [GO:0003723 "RNA binding" evidence=TAS]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0006414 "translational elongation" evidence=TAS] [GO:0006415
"translational termination" evidence=TAS] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR002171 InterPro:IPR022666 InterPro:IPR022669
InterPro:IPR022671 InterPro:IPR023672 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 PROSITE:PS00467 Reactome:REACT_116125
GO:GO:0000184 GO:GO:0006413 GO:GO:0003723 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 EMBL:CH471162
GO:GO:0019843 Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0006415
GO:GO:0006414 InterPro:IPR008991 SUPFAM:SSF50104
Reactome:REACT_1762 GO:GO:0006614 GO:GO:0022625 GO:GO:0019083
KO:K02938 Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
eggNOG:COG0090 OMA:GRVIRNQ CTD:6132 HOVERGEN:HBG079431
OrthoDB:EOG4XKV7P ChiTaRS:RPL8 EMBL:Z28407 EMBL:AB061821
EMBL:BT007379 EMBL:CR457046 EMBL:AK289459 EMBL:BC000047
EMBL:BC000077 EMBL:BC012197 EMBL:BC013104 EMBL:BC093064
EMBL:AB007168 IPI:IPI00012772 PIR:JN0923 RefSeq:NP_000964.1
RefSeq:NP_150644.1 UniGene:Hs.178551 ProteinModelPortal:P62917
SMR:P62917 IntAct:P62917 MINT:MINT-1135693 STRING:P62917
PhosphoSite:P62917 DMDM:51702823 PaxDb:P62917 PRIDE:P62917
DNASU:6132 Ensembl:ENST00000262584 Ensembl:ENST00000394920
GeneID:6132 KEGG:hsa:6132 UCSC:uc003zeb.3 GeneCards:GC08M145985
HGNC:HGNC:10368 MIM:604177 neXtProt:NX_P62917 PharmGKB:PA34768
InParanoid:P62917 PhylomeDB:P62917 GenomeRNAi:6132 NextBio:23815
ArrayExpress:P62917 Bgee:P62917 CleanEx:HS_RPL8
Genevestigator:P62917 GermOnline:ENSG00000161016 Uniprot:P62917
Length = 257
Score = 924 (330.3 bits), Expect = 9.0e-93, P = 9.0e-93
Identities = 162/238 (68%), Positives = 201/238 (84%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 60
MGRVIR QRKGAGSVF++H HRKG AR R++DF ER+GY+KG++ +IIHDPGRGAPLA+
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 61 VTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
V FR P+R++ + ELF+AAEG++TGQFVYCG+KA L +GNVLP+ ++PEG +VC +E
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 121 GDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
GDRG AR SG+YA VISHNP+ TR+KLPSG+KK++ S RA++G VAGGGR +KP+L
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPIL 180
Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 238
KAG AYHK++ KRNCWP+VRGVAMNPVEHP GGGNHQHIG ST+RRDAP G+KVGLI
Sbjct: 181 KAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLI 238
>UNIPROTKB|F2Z567 [details] [associations]
symbol:RPL8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 InterPro:IPR023672
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104 GO:GO:0022625
KO:K02938 Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
GeneTree:ENSGT00390000009907 OMA:GRVIRNQ CTD:6132 HAMAP:MF_01320_A
EMBL:CU468612 RefSeq:XP_001924964.1 UniGene:Ssc.53780
ProteinModelPortal:F2Z567 SMR:F2Z567 PRIDE:F2Z567
Ensembl:ENSSSCT00000031015 GeneID:100154456 KEGG:ssc:100154456
Uniprot:F2Z567
Length = 257
Score = 924 (330.3 bits), Expect = 9.0e-93, P = 9.0e-93
Identities = 162/238 (68%), Positives = 201/238 (84%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 60
MGRVIR QRKGAGSVF++H HRKG AR R++DF ER+GY+KG++ +IIHDPGRGAPLA+
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 61 VTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
V FR P+R++ + ELF+AAEG++TGQFVYCG+KA L +GNVLP+ ++PEG +VC +E
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 121 GDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
GDRG AR SG+YA VISHNP+ TR+KLPSG+KK++ S RA++G VAGGGR +KP+L
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPIL 180
Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 238
KAG AYHK++ KRNCWP+VRGVAMNPVEHP GGGNHQHIG ST+RRDAP G+KVGLI
Sbjct: 181 KAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLI 238
>MGI|MGI:1350927 [details] [associations]
symbol:Rpl8 "ribosomal protein L8" species:10090 "Mus
musculus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0015934 "large ribosomal subunit" evidence=IEA]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISO] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR002171
InterPro:IPR022666 InterPro:IPR022669 InterPro:IPR022671
InterPro:IPR023672 Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158
PROSITE:PS00467 MGI:MGI:1350927 GO:GO:0006412 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 GO:GO:0022625 KO:K02938 Gene3D:4.10.950.10
InterPro:IPR014726 PANTHER:PTHR13691 eggNOG:COG0090
GeneTree:ENSGT00390000009907 HOGENOM:HOG000232983 OMA:GRVIRNQ
CTD:6132 HOVERGEN:HBG079431 OrthoDB:EOG4XKV7P ChiTaRS:RPL8
EMBL:U67771 EMBL:AK088263 EMBL:AK131970 EMBL:AK145498 EMBL:AK167775
EMBL:AK168769 EMBL:BC043017 IPI:IPI00137787 RefSeq:NP_036183.1
UniGene:Mm.30066 ProteinModelPortal:P62918 SMR:P62918 STRING:P62918
PaxDb:P62918 PRIDE:P62918 Ensembl:ENSMUST00000004072 GeneID:26961
KEGG:mmu:26961 UCSC:uc007wmt.2 InParanoid:P62918 NextBio:304899
Bgee:P62918 CleanEx:MM_RPL8 Genevestigator:P62918
GermOnline:ENSMUSG00000003970 Uniprot:P62918
Length = 257
Score = 924 (330.3 bits), Expect = 9.0e-93, P = 9.0e-93
Identities = 162/238 (68%), Positives = 201/238 (84%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 60
MGRVIR QRKGAGSVF++H HRKG AR R++DF ER+GY+KG++ +IIHDPGRGAPLA+
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 61 VTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
V FR P+R++ + ELF+AAEG++TGQFVYCG+KA L +GNVLP+ ++PEG +VC +E
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 121 GDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
GDRG AR SG+YA VISHNP+ TR+KLPSG+KK++ S RA++G VAGGGR +KP+L
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPIL 180
Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 238
KAG AYHK++ KRNCWP+VRGVAMNPVEHP GGGNHQHIG ST+RRDAP G+KVGLI
Sbjct: 181 KAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLI 238
>RGD|619827 [details] [associations]
symbol:Rpl8 "ribosomal protein L8" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015934
"large ribosomal subunit" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=ISO] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 InterPro:IPR023672
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
RGD:619827 GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104 GO:GO:0022625
KO:K02938 Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
eggNOG:COG0090 GeneTree:ENSGT00390000009907 HOGENOM:HOG000232983
OMA:GRVIRNQ CTD:6132 HOVERGEN:HBG079431 OrthoDB:EOG4XKV7P
EMBL:X62145 EMBL:BC126063 IPI:IPI00215208 PIR:JU0177
RefSeq:NP_001030088.2 RefSeq:XP_002729189.1 RefSeq:XP_003750416.1
UniGene:Rn.127774 UniGene:Rn.9810 ProteinModelPortal:P62919
SMR:P62919 IntAct:P62919 STRING:P62919 PRIDE:P62919
Ensembl:ENSRNOT00000005960 Ensembl:ENSRNOT00000041984
GeneID:100360117 GeneID:100910370 GeneID:26962 KEGG:rno:100360117
KEGG:rno:100910370 KEGG:rno:26962 UCSC:RGD:619827 InParanoid:P62919
NextBio:608033 Genevestigator:P62919 GermOnline:ENSRNOG00000004497
GermOnline:ENSRNOG00000032635 Uniprot:P62919
Length = 257
Score = 924 (330.3 bits), Expect = 9.0e-93, P = 9.0e-93
Identities = 162/238 (68%), Positives = 201/238 (84%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 60
MGRVIR QRKGAGSVF++H HRKG AR R++DF ER+GY+KG++ +IIHDPGRGAPLA+
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 61 VTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
V FR P+R++ + ELF+AAEG++TGQFVYCG+KA L +GNVLP+ ++PEG +VC +E
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 121 GDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
GDRG AR SG+YA VISHNP+ TR+KLPSG+KK++ S RA++G VAGGGR +KP+L
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPIL 180
Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 238
KAG AYHK++ KRNCWP+VRGVAMNPVEHP GGGNHQHIG ST+RRDAP G+KVGLI
Sbjct: 181 KAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLI 238
>DICTYBASE|DDB_G0274113 [details] [associations]
symbol:rpl8 "60S ribosomal protein L8" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR002171
InterPro:IPR022666 InterPro:IPR022669 InterPro:IPR022671
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
dictyBase:DDB_G0274113 GO:GO:0005615 GO:GO:0006412
GenomeReviews:CM000151_GR EMBL:AAFI02000012 GO:GO:0005840
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 KO:K02938 Gene3D:4.10.950.10 InterPro:IPR014726
PANTHER:PTHR13691 eggNOG:COG0090 OMA:GRVIRNQ EMBL:X15710 PIR:S06087
RefSeq:XP_644192.1 ProteinModelPortal:P13023 SMR:P13023
STRING:P13023 PRIDE:P13023 EnsemblProtists:DDB0185202
GeneID:8619621 KEGG:ddi:DDB_G0274113 ProtClustDB:PTZ00180
Uniprot:P13023
Length = 255
Score = 922 (329.6 bits), Expect = 1.5e-92, P = 1.5e-92
Identities = 165/239 (69%), Positives = 200/239 (83%)
Query: 1 MGRVIRAQRKG-AGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLA 59
MGR+IRAQRKG AGSVF +HTHHRKG RFR+LD+ ER GY+KGV+ EIIHDPGRGAPLA
Sbjct: 1 MGRIIRAQRKGKAGSVFGAHTHHRKGTPRFRALDYAERQGYVKGVVKEIIHDPGRGAPLA 60
Query: 60 RVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHH 119
RV F+ +++ K+LF+A EGM+TGQFV+ G+KATL +GN+LP+ +PEG ++CNVE
Sbjct: 61 RVVFKGLTQFKLDKQLFIAPEGMHTGQFVFAGKKATLTIGNILPIGKLPEGTIICNVEEK 120
Query: 120 VGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPL 179
+GD G ARCSG+YA ++SHNPD TRIKLPSG+KK V S RAMIG VAGGGR +KP+
Sbjct: 121 LGDCGAVARCSGNYATIVSHNPDEGVTRIKLPSGSKKNVSSLARAMIGIVAGGGRIDKPM 180
Query: 180 LKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 238
LKAG A+HK+RVK+N WPKVRGVAMNPVEHPHGGGNHQH+GHA+T +RD P G+KVGLI
Sbjct: 181 LKAGRAFHKYRVKKNNWPKVRGVAMNPVEHPHGGGNHQHVGHATTTKRDDPAGKKVGLI 239
>ZFIN|ZDB-GENE-040426-1670 [details] [associations]
symbol:rpl8 "ribosomal protein L8" species:7955
"Danio rerio" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0015934 "large
ribosomal subunit" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR002171
InterPro:IPR022666 InterPro:IPR022669 InterPro:IPR022671
InterPro:IPR023672 Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158
PROSITE:PS00467 ZFIN:ZDB-GENE-040426-1670 GO:GO:0006412
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0019843 GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 KO:K02938 Gene3D:4.10.950.10
InterPro:IPR014726 PANTHER:PTHR13691 eggNOG:COG0090
GeneTree:ENSGT00390000009907 HOGENOM:HOG000232983 OMA:GRVIRNQ
CTD:6132 HOVERGEN:HBG079431 OrthoDB:EOG4XKV7P EMBL:BC059473
EMBL:BC065432 IPI:IPI00505170 RefSeq:NP_957007.1 UniGene:Dr.4091
ProteinModelPortal:Q6P0V6 SMR:Q6P0V6 STRING:Q6P0V6 PRIDE:Q6P0V6
Ensembl:ENSDART00000006948 Ensembl:ENSDART00000140039 GeneID:393686
KEGG:dre:393686 InParanoid:Q6P0V6 NextBio:20814689
ArrayExpress:Q6P0V6 Bgee:Q6P0V6 Uniprot:Q6P0V6
Length = 257
Score = 917 (327.9 bits), Expect = 5.0e-92, P = 5.0e-92
Identities = 160/238 (67%), Positives = 200/238 (84%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 60
MGRVIR QRKGAGSVFK+H HRKG A+ R +DF ER+GY+KG++ +IIHDPGRGAPLA+
Sbjct: 1 MGRVIRGQRKGAGSVFKAHVKHRKGAAKLRHIDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 61 VTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
V FR P+R++ + ELF+AAEG++TGQF+YCG+KA L +GNVLP+ ++PEG +VC +E
Sbjct: 61 VMFRDPYRFKKRTELFIAAEGIHTGQFIYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 121 GDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
GDRG AR SG+YA VISHNP+ +R+KLPSG+KK++ S RA++G VAGGGR +KP+L
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKSRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPIL 180
Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 238
KAG AYHK++ KRNCWP+VRGVAMNPVEHP GGGNHQHIG ST+RRDAP G+KVGLI
Sbjct: 181 KAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLI 238
>RGD|1561333 [details] [associations]
symbol:RGD1561333 "similar to 60S ribosomal protein L8"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015934
"large ribosomal subunit" evidence=IEA] InterPro:IPR002171
InterPro:IPR022666 InterPro:IPR022669 InterPro:IPR023672
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 RGD:1561333
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0015934 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
GeneTree:ENSGT00390000009907 OMA:DNDTSRI OrthoDB:EOG4XKV7P
HAMAP:MF_01320_A IPI:IPI00368250 RefSeq:XP_001061778.1
RefSeq:XP_574690.1 Ensembl:ENSRNOT00000048691 GeneID:499374
KEGG:rno:499374 UCSC:RGD:1561333 CTD:499374 NextBio:702710
Uniprot:D4A6W6
Length = 257
Score = 904 (323.3 bits), Expect = 1.2e-90, P = 1.2e-90
Identities = 159/238 (66%), Positives = 199/238 (83%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 60
MGRVIR QRKGAGSVF++H HRKG AR R++DF ER+GY+KG++ +IIHDPGR APLA+
Sbjct: 1 MGRVIRDQRKGAGSVFRAHLKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRSAPLAK 60
Query: 61 VTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
V FR P+R++ + ELF+AAEG++TGQFVYCG+KA L +GNVLP+ ++PEG +VC +E
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 121 GDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
GDRG AR SG+YA VISHNP+ TR+KLPSG+KK++ S RA++G VAGGGR +KP+L
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPIL 180
Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 238
KAG AYHK++ KRNCWP+V+GVAMNPVEHP GG NHQHIG ST+RRDAP G+KVGLI
Sbjct: 181 KAGRAYHKYKAKRNCWPRVQGVAMNPVEHPFGGDNHQHIGKPSTIRRDAPAGRKVGLI 238
>WB|WBGene00004413 [details] [associations]
symbol:rpl-2 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
InterPro:IPR002171 InterPro:IPR022666 InterPro:IPR022669
InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158
PROSITE:PS00467 GO:GO:0009792 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 EMBL:Z81453 GO:GO:0006412 GO:GO:0040011 GO:GO:0000003
GO:GO:0005840 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0019843 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 KO:K02938 Gene3D:4.10.950.10
InterPro:IPR014726 PANTHER:PTHR13691 eggNOG:COG0090
GeneTree:ENSGT00390000009907 HOGENOM:HOG000232983 OMA:GRVIRNQ
PIR:T18676 RefSeq:NP_507940.1 ProteinModelPortal:Q9XVF7 SMR:Q9XVF7
DIP:DIP-24785N IntAct:Q9XVF7 MINT:MINT-1062067 STRING:Q9XVF7
PaxDb:Q9XVF7 PRIDE:Q9XVF7 EnsemblMetazoa:B0250.1.1
EnsemblMetazoa:B0250.1.2 GeneID:180343 KEGG:cel:CELE_B0250.1
UCSC:B0250.1.1 CTD:180343 WormBase:B0250.1 InParanoid:Q9XVF7
NextBio:908952 Uniprot:Q9XVF7
Length = 260
Score = 904 (323.3 bits), Expect = 1.2e-90, P = 1.2e-90
Identities = 161/238 (67%), Positives = 196/238 (82%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 60
MGR IR QRKGAG +FKSH HRKG ++ R LD+ ER+GY+KG++ +IIHDPGRGAPLA
Sbjct: 1 MGRRIRIQRKGAGGIFKSHNKHRKGASKLRPLDYAERHGYIKGLVKDIIHDPGRGAPLAI 60
Query: 61 VTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
+ FR P++Y+ K VAAEGM+TGQF++CG KA + +GN++P+ ++PEG +CNVE+
Sbjct: 61 IAFRDPYKYKTVKTTVVAAEGMHTGQFIHCGAKAQIQIGNIVPVGTLPEGTTICNVENKS 120
Query: 121 GDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
GDRGV AR SG+YA VI+HNPD TRI+LPSGAKK+V S RAMIG VAGGGRT+KPLL
Sbjct: 121 GDRGVIARASGNYATVIAHNPDTKKTRIRLPSGAKKVVQSVNRAMIGLVAGGGRTDKPLL 180
Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 238
KAG +YHK++ KRN WP+VRGVAMNPVEHPHGGGNHQHIGH STVRRDA G+KVGLI
Sbjct: 181 KAGRSYHKYKAKRNSWPRVRGVAMNPVEHPHGGGNHQHIGHPSTVRRDASAGKKVGLI 238
>POMBASE|SPAC1F7.13c [details] [associations]
symbol:rpl801 "60S ribosomal protein L8 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006412 "translation" evidence=ISO] [GO:0019843 "rRNA binding"
evidence=ISM] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=ISO] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 PROSITE:PS00467 PomBase:SPBC839.04
PomBase:SPAC1F7.13c PomBase:SPBC2F12.07c GO:GO:0005634
EMBL:CU329670 GenomeReviews:CU329670_GR EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0003735 GO:GO:0002181
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 GO:GO:0022625 KO:K02938 Gene3D:4.10.950.10
InterPro:IPR014726 PANTHER:PTHR13691 eggNOG:COG0090 EMBL:X05036
EMBL:X51659 EMBL:X16392 EMBL:AB027845 PIR:S07377 PIR:T40711
RefSeq:NP_595244.1 RefSeq:NP_595709.1 RefSeq:XP_001713102.1
ProteinModelPortal:P08093 SMR:P08093 IntAct:P08093 STRING:P08093
PRIDE:P08093 EnsemblFungi:SPAC1F7.13c.1 EnsemblFungi:SPBC2F12.07c.1
EnsemblFungi:SPBC839.04.1 GeneID:2540366 GeneID:2541191
GeneID:5802952 KEGG:spo:SPAC1F7.13c KEGG:spo:SPBC2F12.07c
KEGG:spo:SPBC839.04 HOGENOM:HOG000232983 OMA:GRVIRNQ
OrthoDB:EOG41RT3W NextBio:20801494 Uniprot:P08093
Length = 253
Score = 889 (318.0 bits), Expect = 4.6e-89, P = 4.6e-89
Identities = 155/238 (65%), Positives = 193/238 (81%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 60
MGRVIRAQRK +G +F++HT RKG A+ R+LDF ER+GY++GV+ +IIHDPGRGAPLA+
Sbjct: 1 MGRVIRAQRK-SGGIFQAHTRLRKGAAQLRTLDFAERHGYIRGVVQKIIHDPGRGAPLAK 59
Query: 61 VTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
V FR+P+ Y+ E FVA EGMYTGQFVYCG+ A L VGNVLP+ +PEG ++ NVE
Sbjct: 60 VAFRNPYHYRTDVETFVATEGMYTGQFVYCGKNAALTVGNVLPVGEMPEGTIISNVEEKA 119
Query: 121 GDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
GDRG R SG+Y +++ H+ D TR+KLPSGAKK+VPS R ++G VAGGGR +KPLL
Sbjct: 120 GDRGALGRSSGNYVIIVGHDVDTGKTRVKLPSGAKKVVPSSARGVVGIVAGGGRIDKPLL 179
Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 238
KAG A+HK+RVKRNCWP+ RGVAMNPV+HPHGGGNHQH+GH++TV R + PGQKVGLI
Sbjct: 180 KAGRAFHKYRVKRNCWPRTRGVAMNPVDHPHGGGNHQHVGHSTTVPRQSAPGQKVGLI 237
>POMBASE|SPBC2F12.07c [details] [associations]
symbol:rpl802 "60S ribosomal protein L8 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0006412 "translation" evidence=ISO]
[GO:0019843 "rRNA binding" evidence=ISM] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISO] InterPro:IPR002171
InterPro:IPR022666 InterPro:IPR022669 InterPro:IPR022671
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
PomBase:SPBC839.04 PomBase:SPAC1F7.13c PomBase:SPBC2F12.07c
GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0003735 GO:GO:0002181
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 GO:GO:0022625 KO:K02938 Gene3D:4.10.950.10
InterPro:IPR014726 PANTHER:PTHR13691 eggNOG:COG0090 EMBL:X05036
EMBL:X51659 EMBL:X16392 EMBL:AB027845 PIR:S07377 PIR:T40711
RefSeq:NP_595244.1 RefSeq:NP_595709.1 RefSeq:XP_001713102.1
ProteinModelPortal:P08093 SMR:P08093 IntAct:P08093 STRING:P08093
PRIDE:P08093 EnsemblFungi:SPAC1F7.13c.1 EnsemblFungi:SPBC2F12.07c.1
EnsemblFungi:SPBC839.04.1 GeneID:2540366 GeneID:2541191
GeneID:5802952 KEGG:spo:SPAC1F7.13c KEGG:spo:SPBC2F12.07c
KEGG:spo:SPBC839.04 HOGENOM:HOG000232983 OMA:GRVIRNQ
OrthoDB:EOG41RT3W NextBio:20801494 Uniprot:P08093
Length = 253
Score = 889 (318.0 bits), Expect = 4.6e-89, P = 4.6e-89
Identities = 155/238 (65%), Positives = 193/238 (81%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 60
MGRVIRAQRK +G +F++HT RKG A+ R+LDF ER+GY++GV+ +IIHDPGRGAPLA+
Sbjct: 1 MGRVIRAQRK-SGGIFQAHTRLRKGAAQLRTLDFAERHGYIRGVVQKIIHDPGRGAPLAK 59
Query: 61 VTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
V FR+P+ Y+ E FVA EGMYTGQFVYCG+ A L VGNVLP+ +PEG ++ NVE
Sbjct: 60 VAFRNPYHYRTDVETFVATEGMYTGQFVYCGKNAALTVGNVLPVGEMPEGTIISNVEEKA 119
Query: 121 GDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
GDRG R SG+Y +++ H+ D TR+KLPSGAKK+VPS R ++G VAGGGR +KPLL
Sbjct: 120 GDRGALGRSSGNYVIIVGHDVDTGKTRVKLPSGAKKVVPSSARGVVGIVAGGGRIDKPLL 179
Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 238
KAG A+HK+RVKRNCWP+ RGVAMNPV+HPHGGGNHQH+GH++TV R + PGQKVGLI
Sbjct: 180 KAGRAFHKYRVKRNCWPRTRGVAMNPVDHPHGGGNHQHVGHSTTVPRQSAPGQKVGLI 237
>POMBASE|SPBC839.04 [details] [associations]
symbol:rpl803 "60S ribosomal protein L8 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006412 "translation"
evidence=ISO] [GO:0019843 "rRNA binding" evidence=ISM] [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISO]
InterPro:IPR002171 InterPro:IPR022666 InterPro:IPR022669
InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158
PROSITE:PS00467 PomBase:SPBC839.04 PomBase:SPAC1F7.13c
PomBase:SPBC2F12.07c GO:GO:0005634 EMBL:CU329670
GenomeReviews:CU329670_GR EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0003735 GO:GO:0002181 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0019843 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 GO:GO:0022625 KO:K02938
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
eggNOG:COG0090 EMBL:X05036 EMBL:X51659 EMBL:X16392 EMBL:AB027845
PIR:S07377 PIR:T40711 RefSeq:NP_595244.1 RefSeq:NP_595709.1
RefSeq:XP_001713102.1 ProteinModelPortal:P08093 SMR:P08093
IntAct:P08093 STRING:P08093 PRIDE:P08093 EnsemblFungi:SPAC1F7.13c.1
EnsemblFungi:SPBC2F12.07c.1 EnsemblFungi:SPBC839.04.1
GeneID:2540366 GeneID:2541191 GeneID:5802952 KEGG:spo:SPAC1F7.13c
KEGG:spo:SPBC2F12.07c KEGG:spo:SPBC839.04 HOGENOM:HOG000232983
OMA:GRVIRNQ OrthoDB:EOG41RT3W NextBio:20801494 Uniprot:P08093
Length = 253
Score = 889 (318.0 bits), Expect = 4.6e-89, P = 4.6e-89
Identities = 155/238 (65%), Positives = 193/238 (81%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 60
MGRVIRAQRK +G +F++HT RKG A+ R+LDF ER+GY++GV+ +IIHDPGRGAPLA+
Sbjct: 1 MGRVIRAQRK-SGGIFQAHTRLRKGAAQLRTLDFAERHGYIRGVVQKIIHDPGRGAPLAK 59
Query: 61 VTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
V FR+P+ Y+ E FVA EGMYTGQFVYCG+ A L VGNVLP+ +PEG ++ NVE
Sbjct: 60 VAFRNPYHYRTDVETFVATEGMYTGQFVYCGKNAALTVGNVLPVGEMPEGTIISNVEEKA 119
Query: 121 GDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
GDRG R SG+Y +++ H+ D TR+KLPSGAKK+VPS R ++G VAGGGR +KPLL
Sbjct: 120 GDRGALGRSSGNYVIIVGHDVDTGKTRVKLPSGAKKVVPSSARGVVGIVAGGGRIDKPLL 179
Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 238
KAG A+HK+RVKRNCWP+ RGVAMNPV+HPHGGGNHQH+GH++TV R + PGQKVGLI
Sbjct: 180 KAGRAFHKYRVKRNCWPRTRGVAMNPVDHPHGGGNHQHVGHSTTVPRQSAPGQKVGLI 237
>UNIPROTKB|E1BHY4 [details] [associations]
symbol:E1BHY4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 PROSITE:PS00467 GO:GO:0006412 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 GO:GO:0022625 Gene3D:4.10.950.10 InterPro:IPR014726
PANTHER:PTHR13691 GeneTree:ENSGT00390000009907 EMBL:DAAA02032881
IPI:IPI00710345 PRIDE:E1BHY4 Ensembl:ENSBTAT00000004630 OMA:KAGHAYH
NextBio:20867523 Uniprot:E1BHY4
Length = 257
Score = 881 (315.2 bits), Expect = 3.2e-88, P = 3.2e-88
Identities = 155/238 (65%), Positives = 196/238 (82%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 60
MGRVI QRKGA SVF++H HRKG AR R++DF ER+GY+KG++ ++IHDPGRGAPLA+
Sbjct: 1 MGRVIHGQRKGASSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDVIHDPGRGAPLAK 60
Query: 61 VTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
V FR P+R++ + ELF+AAEG++TGQ YCG+KA L +GNVLP+ ++PEG +VC +E
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQSGYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 121 GDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
GDRG AR SG+YA VISH+P+ TR+KLPSG+KK++ S RA++G VAGGG +KP+L
Sbjct: 121 GDRGKLARASGNYATVISHSPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGCIDKPIL 180
Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 238
KAG+AYHK++ KRNCWP VRGVAMNPVEHP GGGNHQHIG ST+RRDAP G+KVGLI
Sbjct: 181 KAGHAYHKYKAKRNCWPLVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLI 238
>SGD|S000002104 [details] [associations]
symbol:RPL2A "Ribosomal 60S subunit protein L2A" species:4932
"Saccharomyces cerevisiae" [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IDA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA;IDA] [GO:0002181 "cytoplasmic translation"
evidence=IDA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR002171
InterPro:IPR022666 InterPro:IPR022669 InterPro:IPR022671
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
SGD:S000002104 EMBL:D50617 EMBL:BK006940 GO:GO:0003735
GO:GO:0002181 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0019843 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 GO:GO:0022625 EMBL:U05820
RefSeq:NP_116688.3 GeneID:850590 KEGG:sce:YFR031C-A KO:K02938
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691 PDB:1K5Y
PDB:1S1I PDB:3IZS PDB:3O58 PDB:3O5H PDB:3U5E PDB:3U5I PDBsum:1K5Y
PDBsum:1S1I PDBsum:3IZS PDBsum:3O58 PDBsum:3O5H PDBsum:3U5E
PDBsum:3U5I KO:K02905 RefSeq:NP_116690.3 GeneID:850592
KEGG:sce:YFR032C-A EMBL:U17359 PIR:S50243 RefSeq:NP_012246.1
ProteinModelPortal:P0CX45 SMR:P0CX45 EnsemblFungi:YFR031C-A
EnsemblFungi:YIL018W GeneID:854794 KEGG:sce:YIL018W CYGD:YFR031c-a
EvolutionaryTrace:P0CX45 NextBio:966437 ArrayExpress:P0CX45
GermOnline:YFR031C-A Uniprot:P0CX45
Length = 254
Score = 874 (312.7 bits), Expect = 1.8e-87, P = 1.8e-87
Identities = 152/238 (63%), Positives = 195/238 (81%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 60
MGRVIR QRKGAGS+F SHT R+G A+ R+LD+ ER+GY++G++ +I+HD GRGAPLA+
Sbjct: 1 MGRVIRNQRKGAGSIFTSHTRLRQGAAKLRTLDYAERHGYIRGIVKQIVHDSGRGAPLAK 60
Query: 61 VTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
V FR P++Y+ ++E+F+A EG++TGQF+Y G+KA+L VGNVLPL S+PEG +V NVE
Sbjct: 61 VVFRDPYKYRLREEIFIANEGVHTGQFIYAGKKASLNVGNVLPLGSVPEGTIVSNVEEKP 120
Query: 121 GDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
GDRG AR SG+Y ++I HNPD + TR++LPSGAKK++ S R +IG +AGGGR +KPLL
Sbjct: 121 GDRGALARASGNYVIIIGHNPDENKTRVRLPSGAKKVISSDARGVIGVIAGGGRVDKPLL 180
Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 238
KAG A+HK+R+KRN WPK RGVAMNPV+HPHGGGNHQHIG AST+ R A GQK GLI
Sbjct: 181 KAGRAFHKYRLKRNSWPKTRGVAMNPVDHPHGGGNHQHIGKASTISRGAVSGQKAGLI 238
>SGD|S000001280 [details] [associations]
symbol:RPL2B "Ribosomal 60S subunit protein L2B" species:4932
"Saccharomyces cerevisiae" [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IDA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA;IDA] [GO:0002181 "cytoplasmic translation"
evidence=IDA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA]
InterPro:IPR002171 InterPro:IPR022666 InterPro:IPR022669
InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158
PROSITE:PS00467 SGD:S000001280 EMBL:BK006942 GO:GO:0003735
GO:GO:0002181 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0019843 PDB:4B6A PDBsum:4B6A EMBL:Z46881 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104 GO:GO:0022625
RefSeq:NP_116688.3 GeneID:850590 KEGG:sce:YFR031C-A KO:K02938
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691 KO:K02905
RefSeq:NP_116690.3 GeneID:850592 KEGG:sce:YFR032C-A PIR:S50243
RefSeq:NP_012246.1 EnsemblFungi:YFR031C-A EnsemblFungi:YIL018W
GeneID:854794 KEGG:sce:YIL018W NextBio:966437 EMBL:U17360
ProteinModelPortal:P0CX46 SMR:P0CX46 CYGD:YIL018w
GeneTree:ENSGT00390000009907 ArrayExpress:P0CX46 GermOnline:YIL018W
Uniprot:P0CX46
Length = 254
Score = 874 (312.7 bits), Expect = 1.8e-87, P = 1.8e-87
Identities = 152/238 (63%), Positives = 195/238 (81%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 60
MGRVIR QRKGAGS+F SHT R+G A+ R+LD+ ER+GY++G++ +I+HD GRGAPLA+
Sbjct: 1 MGRVIRNQRKGAGSIFTSHTRLRQGAAKLRTLDYAERHGYIRGIVKQIVHDSGRGAPLAK 60
Query: 61 VTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
V FR P++Y+ ++E+F+A EG++TGQF+Y G+KA+L VGNVLPL S+PEG +V NVE
Sbjct: 61 VVFRDPYKYRLREEIFIANEGVHTGQFIYAGKKASLNVGNVLPLGSVPEGTIVSNVEEKP 120
Query: 121 GDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
GDRG AR SG+Y ++I HNPD + TR++LPSGAKK++ S R +IG +AGGGR +KPLL
Sbjct: 121 GDRGALARASGNYVIIIGHNPDENKTRVRLPSGAKKVISSDARGVIGVIAGGGRVDKPLL 180
Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 238
KAG A+HK+R+KRN WPK RGVAMNPV+HPHGGGNHQHIG AST+ R A GQK GLI
Sbjct: 181 KAGRAFHKYRLKRNSWPKTRGVAMNPVDHPHGGGNHQHIGKASTISRGAVSGQKAGLI 238
>ASPGD|ASPL0000046534 [details] [associations]
symbol:AN2275 species:162425 "Emericella nidulans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=IEA] [GO:0002181 "cytoplasmic
translation" evidence=IEA] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 PROSITE:PS00467 GO:GO:0006412 EMBL:BN001307
GO:GO:0005840 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
InterPro:IPR014726 PANTHER:PTHR13691 HOGENOM:HOG000232983
OMA:GRVIRNQ EnsemblFungi:CADANIAT00008967 Uniprot:C8VN22
Length = 254
Score = 870 (311.3 bits), Expect = 4.7e-87, P = 4.7e-87
Identities = 157/238 (65%), Positives = 184/238 (77%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 60
MGRVIR QRKG GS+F +HT K PA+FR LD+ ER+GY +GV+ EIIHD GRGAPLA+
Sbjct: 1 MGRVIRNQRKGRGSIFTAHTRLNKAPAQFRVLDYAERHGYTRGVVKEIIHDAGRGAPLAK 60
Query: 61 VTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
V FRHP++++H E F+A EGMYTGQF+Y G+ A L +GN+LPL S+PEG V+ NVE
Sbjct: 61 VQFRHPYKFKHITETFIANEGMYTGQFIYAGKNAALTIGNILPLASVPEGTVISNVEEKA 120
Query: 121 GDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
GDRG R SG+Y VI HNPD TR+KLPSGAKK++ + R MIG VAGGGRT+KPLL
Sbjct: 121 GDRGALGRTSGNYVTVIGHNPDEGKTRVKLPSGAKKVIKNTARGMIGIVAGGGRTDKPLL 180
Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 238
KA A HKF VKRN WPK RGVAMNPV+HPHGGGNHQHIG AST+ R A GQK GLI
Sbjct: 181 KASRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGGNHQHIGKASTISRYAAHGQKAGLI 238
>GENEDB_PFALCIPARUM|PFE0845c [details] [associations]
symbol:PFE0845c "60S ribosomal subunit protein
L8, putative" species:5833 "Plasmodium falciparum" [GO:0015934
"large ribosomal subunit" evidence=ISS] InterPro:IPR002171
InterPro:IPR022666 InterPro:IPR022669 InterPro:IPR022671
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AL844504 GO:GO:0015934 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104 KO:K02938
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
HOGENOM:HOG000232983 OMA:GRVIRNQ ProtClustDB:PTZ00180 HSSP:P04257
RefSeq:XP_001351726.1 ProteinModelPortal:Q8I3T9 SMR:Q8I3T9
IntAct:Q8I3T9 MINT:MINT-1653669 PRIDE:Q8I3T9
EnsemblProtists:PFE0845c:mRNA GeneID:812984 KEGG:pfa:PFE0845c
EuPathDB:PlasmoDB:PF3D7_0516900 Uniprot:Q8I3T9
Length = 260
Score = 862 (308.5 bits), Expect = 3.3e-86, P = 3.3e-86
Identities = 150/238 (63%), Positives = 188/238 (78%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 60
MGRVIR QRKG GS+FKSH HHRKG A+ R LD+ E+ GY+KG++ +IIHDPGRGAPLA+
Sbjct: 1 MGRVIRGQRKGRGSIFKSHNHHRKGAAKLRHLDYCEKKGYIKGLVKDIIHDPGRGAPLAK 60
Query: 61 VTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
V F+ +Y ++EL +A+EGM+TGQ++ CG KA L VGN+LP+ +PEG ++CN+EH
Sbjct: 61 VIFKRTEKYGKKEELIIASEGMFTGQYISCGTKAPLSVGNILPIGKMPEGTLICNLEHRT 120
Query: 121 GDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
G+RG + SG YA V+ + D T+++LPSGAKK + + RAM+G V GGR +KP+L
Sbjct: 121 GNRGTLVKASGCYATVVGQSEDGKKTKVRLPSGAKKTIDAKARAMVGVVGAGGRIDKPIL 180
Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 238
KAG A+HK+RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGH STV R AP GQKVGLI
Sbjct: 181 KAGVAHHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHPSTVSRSAPAGQKVGLI 238
>UNIPROTKB|Q8I3T9 [details] [associations]
symbol:PFE0845c "60S ribosomal protein L8, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0015934 "large
ribosomal subunit" evidence=ISS] InterPro:IPR002171
InterPro:IPR022666 InterPro:IPR022669 InterPro:IPR022671
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AL844504 GO:GO:0015934 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104 KO:K02938
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
HOGENOM:HOG000232983 OMA:GRVIRNQ ProtClustDB:PTZ00180 HSSP:P04257
RefSeq:XP_001351726.1 ProteinModelPortal:Q8I3T9 SMR:Q8I3T9
IntAct:Q8I3T9 MINT:MINT-1653669 PRIDE:Q8I3T9
EnsemblProtists:PFE0845c:mRNA GeneID:812984 KEGG:pfa:PFE0845c
EuPathDB:PlasmoDB:PF3D7_0516900 Uniprot:Q8I3T9
Length = 260
Score = 862 (308.5 bits), Expect = 3.3e-86, P = 3.3e-86
Identities = 150/238 (63%), Positives = 188/238 (78%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 60
MGRVIR QRKG GS+FKSH HHRKG A+ R LD+ E+ GY+KG++ +IIHDPGRGAPLA+
Sbjct: 1 MGRVIRGQRKGRGSIFKSHNHHRKGAAKLRHLDYCEKKGYIKGLVKDIIHDPGRGAPLAK 60
Query: 61 VTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
V F+ +Y ++EL +A+EGM+TGQ++ CG KA L VGN+LP+ +PEG ++CN+EH
Sbjct: 61 VIFKRTEKYGKKEELIIASEGMFTGQYISCGTKAPLSVGNILPIGKMPEGTLICNLEHRT 120
Query: 121 GDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
G+RG + SG YA V+ + D T+++LPSGAKK + + RAM+G V GGR +KP+L
Sbjct: 121 GNRGTLVKASGCYATVVGQSEDGKKTKVRLPSGAKKTIDAKARAMVGVVGAGGRIDKPIL 180
Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 238
KAG A+HK+RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGH STV R AP GQKVGLI
Sbjct: 181 KAGVAHHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHPSTVSRSAPAGQKVGLI 238
>UNIPROTKB|E9PIZ3 [details] [associations]
symbol:RPL8 "60S ribosomal protein L8" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR002171 InterPro:IPR022669
InterPro:IPR022671 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR012340
SUPFAM:SSF50249 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
InterPro:IPR014726 PANTHER:PTHR13691 ChiTaRS:RPL8 HGNC:HGNC:10368
EMBL:AF235103 IPI:IPI00975850 ProteinModelPortal:E9PIZ3 SMR:E9PIZ3
Ensembl:ENST00000534813 ArrayExpress:E9PIZ3 Bgee:E9PIZ3
Uniprot:E9PIZ3
Length = 221
Score = 617 (222.3 bits), Expect = 8.5e-77, Sum P(2) = 8.5e-77
Identities = 108/163 (66%), Positives = 134/163 (82%)
Query: 76 FVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAV 135
++ G++TGQFVYCG+KA L +GNVLP+ ++PEG +VC +E GDRG AR SG+YA
Sbjct: 40 YIKGIGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYAT 99
Query: 136 VISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNC 195
VISHNP+ TR+KLPSG+KK++ S RA++G VAGGGR +KP+LKAG AYHK++ KRNC
Sbjct: 100 VISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNC 159
Query: 196 WPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 238
WP+VRGVAMNPVEHP GGGNHQHIG ST+RRDAP G+KVGLI
Sbjct: 160 WPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLI 202
Score = 175 (66.7 bits), Expect = 8.5e-77, Sum P(2) = 8.5e-77
Identities = 31/44 (70%), Positives = 38/44 (86%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGV 44
MGRVIR QRKGAGSVF++H HRKG AR R++DF ER+GY+KG+
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGI 44
>UNIPROTKB|K7GLA0 [details] [associations]
symbol:RPL8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002171 InterPro:IPR022669
InterPro:IPR022671 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
InterPro:IPR012340 SUPFAM:SSF50249 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
GeneTree:ENSGT00390000009907 EMBL:CU468612
Ensembl:ENSSSCT00000033850 Uniprot:K7GLA0
Length = 221
Score = 617 (222.3 bits), Expect = 8.5e-77, Sum P(2) = 8.5e-77
Identities = 108/163 (66%), Positives = 134/163 (82%)
Query: 76 FVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAV 135
++ G++TGQFVYCG+KA L +GNVLP+ ++PEG +VC +E GDRG AR SG+YA
Sbjct: 40 YIKGIGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYAT 99
Query: 136 VISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNC 195
VISHNP+ TR+KLPSG+KK++ S RA++G VAGGGR +KP+LKAG AYHK++ KRNC
Sbjct: 100 VISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNC 159
Query: 196 WPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 238
WP+VRGVAMNPVEHP GGGNHQHIG ST+RRDAP G+KVGLI
Sbjct: 160 WPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLI 202
Score = 175 (66.7 bits), Expect = 8.5e-77, Sum P(2) = 8.5e-77
Identities = 31/44 (70%), Positives = 38/44 (86%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGV 44
MGRVIR QRKGAGSVF++H HRKG AR R++DF ER+GY+KG+
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGI 44
>UNIPROTKB|E9PKZ0 [details] [associations]
symbol:RPL8 "60S ribosomal protein L8" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 Pfam:PF00181 Pfam:PF03947 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
InterPro:IPR014726 PANTHER:PTHR13691 ChiTaRS:RPL8 HGNC:HGNC:10368
EMBL:AF235103 IPI:IPI00976899 SMR:E9PKZ0 Ensembl:ENST00000528957
Ensembl:ENST00000532702 Uniprot:E9PKZ0
Length = 205
Score = 773 (277.2 bits), Expect = 9.0e-77, P = 9.0e-77
Identities = 135/205 (65%), Positives = 172/205 (83%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 60
MGRVIR QRKGAGSVF++H HRKG AR R++DF ER+GY+KG++ +IIHDPGRGAPLA+
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 61 VTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
V FR P+R++ + ELF+AAEG++TGQFVYCG+KA L +GNVLP+ ++PEG +VC +E
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 121 GDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
GDRG AR SG+YA VISHNP+ TR+KLPSG+KK++ S RA++G VAGGGR +KP+L
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPIL 180
Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMN 205
KAG AYHK++ KRNCWP+VRGVAMN
Sbjct: 181 KAGRAYHKYKAKRNCWPRVRGVAMN 205
>UNIPROTKB|K7GSL7 [details] [associations]
symbol:RPL8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002171 InterPro:IPR022669
InterPro:IPR022671 Pfam:PF03947 PROSITE:PS00467 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
GeneTree:ENSGT00390000009907 EMBL:CU468612
Ensembl:ENSSSCT00000035903 Uniprot:K7GSL7
Length = 202
Score = 620 (223.3 bits), Expect = 4.7e-70, Sum P(2) = 4.7e-70
Identities = 109/160 (68%), Positives = 134/160 (83%)
Query: 79 AEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVIS 138
A+G++TGQFVYCG+KA L +GNVLP+ ++PEG +VC +E GDRG AR SG+YA VIS
Sbjct: 24 AKGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVIS 83
Query: 139 HNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPK 198
HNP+ TR+KLPSG+KK++ S RA++G VAGGGR +KP+LKAG AYHK++ KRNCWP+
Sbjct: 84 HNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPR 143
Query: 199 VRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 238
VRGVAMNPVEHP GGGNHQHIG ST+RRDAP G+KVGLI
Sbjct: 144 VRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLI 183
Score = 108 (43.1 bits), Expect = 4.7e-70, Sum P(2) = 4.7e-70
Identities = 20/37 (54%), Positives = 27/37 (72%)
Query: 37 RNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQK 73
R+GY+KG++ +IIHDPGRGAPLA+ F Y +K
Sbjct: 2 RHGYIKGIVKDIIHDPGRGAPLAKGIHTGQFVYCGKK 38
>UNIPROTKB|K7GRF2 [details] [associations]
symbol:RPL8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 Pfam:PF00181 Pfam:PF03947 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104
PANTHER:PTHR13691 GeneTree:ENSGT00390000009907 EMBL:CU468612
Ensembl:ENSSSCT00000034872 Uniprot:K7GRF2
Length = 176
Score = 632 (227.5 bits), Expect = 7.9e-62, P = 7.9e-62
Identities = 112/176 (63%), Positives = 145/176 (82%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 60
MGRVIR QRKGAGSVF++H HRKG AR R++DF ER+GY+KG++ +IIHDPGRGAPLA+
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 61 VTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
V FR P+R++ + ELF+AAEG++TGQFVYCG+KA L +GNVLP+ ++PEG +VC +E
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 121 GDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTE 176
GDRG AR SG+YA VISHNP+ TR+KLPSG+KK++ S RA++G VAGGGR +
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRID 176
>UNIPROTKB|G3V1A1 [details] [associations]
symbol:RPL8 "Ribosomal protein L8, isoform CRA_a"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] InterPro:IPR002171
InterPro:IPR022666 InterPro:IPR022669 Pfam:PF00181 Pfam:PF03947
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:CH471162 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104
PANTHER:PTHR13691 ChiTaRS:RPL8 UniGene:Hs.178551 HGNC:HGNC:10368
EMBL:AF235103 ProteinModelPortal:G3V1A1 SMR:G3V1A1 PRIDE:G3V1A1
Ensembl:ENST00000529920 ArrayExpress:G3V1A1 Bgee:G3V1A1
Uniprot:G3V1A1
Length = 167
Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
Identities = 106/167 (63%), Positives = 138/167 (82%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 60
MGRVIR QRKGAGSVF++H HRKG AR R++DF ER+GY+KG++ +IIHDPGRGAPLA+
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 61 VTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
V FR P+R++ + ELF+AAEG++TGQFVYCG+KA L +GNVLP+ ++PEG +VC +E
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 121 GDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIG 167
GDRG AR SG+YA VISHNP+ TR+KLPSG+KK++ S RA++G
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVG 167
>UNIPROTKB|E9PP36 [details] [associations]
symbol:RPL8 "60S ribosomal protein L8" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR002171 InterPro:IPR022669
InterPro:IPR022671 Pfam:PF03947 PROSITE:PS00467 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
InterPro:IPR014726 PANTHER:PTHR13691 ChiTaRS:RPL8 HGNC:HGNC:10368
EMBL:AF235103 IPI:IPI00792050 ProteinModelPortal:E9PP36 SMR:E9PP36
PRIDE:E9PP36 Ensembl:ENST00000527914 ArrayExpress:E9PP36
Bgee:E9PP36 Uniprot:E9PP36
Length = 148
Score = 357 (130.7 bits), Expect = 8.7e-51, Sum P(2) = 8.7e-51
Identities = 62/84 (73%), Positives = 73/84 (86%)
Query: 155 KKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG 214
KK++ S RA++G VAGGGR +KP+LKAG AYHK++ KRNCWP+VRGVAMNPVEHP GGG
Sbjct: 46 KKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGG 105
Query: 215 NHQHIGHASTVRRDAPPGQKVGLI 238
NHQHIG ST+RRDAP G+KVGLI
Sbjct: 106 NHQHIGKPSTIRRDAPAGRKVGLI 129
Score = 188 (71.2 bits), Expect = 8.7e-51, Sum P(2) = 8.7e-51
Identities = 33/54 (61%), Positives = 43/54 (79%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGR 54
MGRVIR QRKGAGSVF++H HRKG AR R++DF ER+GY+KG++ ++I R
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKKVISSANR 54
>UNIPROTKB|K7GST6 [details] [associations]
symbol:RPL8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002171 InterPro:IPR022669
InterPro:IPR022671 Pfam:PF03947 PROSITE:PS00467 Gene3D:2.40.50.140
InterPro:IPR012340 InterPro:IPR008991 SUPFAM:SSF50104
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
GeneTree:ENSGT00390000009907 EMBL:CU468612
Ensembl:ENSSSCT00000034343 Uniprot:K7GST6
Length = 148
Score = 357 (130.7 bits), Expect = 8.7e-51, Sum P(2) = 8.7e-51
Identities = 62/84 (73%), Positives = 73/84 (86%)
Query: 155 KKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG 214
KK++ S RA++G VAGGGR +KP+LKAG AYHK++ KRNCWP+VRGVAMNPVEHP GGG
Sbjct: 46 KKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGG 105
Query: 215 NHQHIGHASTVRRDAPPGQKVGLI 238
NHQHIG ST+RRDAP G+KVGLI
Sbjct: 106 NHQHIGKPSTIRRDAPAGRKVGLI 129
Score = 188 (71.2 bits), Expect = 8.7e-51, Sum P(2) = 8.7e-51
Identities = 33/54 (61%), Positives = 43/54 (79%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGR 54
MGRVIR QRKGAGSVF++H HRKG AR R++DF ER+GY+KG++ ++I R
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKKVISSANR 54
>UNIPROTKB|K7GQ66 [details] [associations]
symbol:RPL8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002171 InterPro:IPR022669
InterPro:IPR022671 Pfam:PF03947 PROSITE:PS00467 InterPro:IPR008991
SUPFAM:SSF50104 Gene3D:4.10.950.10 InterPro:IPR014726
PANTHER:PTHR13691 GeneTree:ENSGT00390000009907 EMBL:CU468612
Ensembl:ENSSSCT00000034388 Uniprot:K7GQ66
Length = 147
Score = 355 (130.0 bits), Expect = 9.8e-50, Sum P(2) = 9.8e-50
Identities = 62/86 (72%), Positives = 73/86 (84%)
Query: 153 GAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHG 212
G K++ S RA++G VAGGGR +KP+LKAG AYHK++ KRNCWP+VRGVAMNPVEHP G
Sbjct: 43 GIVKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFG 102
Query: 213 GGNHQHIGHASTVRRDAPPGQKVGLI 238
GGNHQHIG ST+RRDAP G+KVGLI
Sbjct: 103 GGNHQHIGKPSTIRRDAPAGRKVGLI 128
Score = 180 (68.4 bits), Expect = 9.8e-50, Sum P(2) = 9.8e-50
Identities = 33/54 (61%), Positives = 43/54 (79%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGR 54
MGRVIR QRKGAGSVF++H HRKG AR R++DF ER+GY+KG++ ++I R
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIV-KVISSANR 53
>UNIPROTKB|E9PKU4 [details] [associations]
symbol:RPL8 "60S ribosomal protein L8" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 PROSITE:PS00467 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 Gene3D:4.10.950.10 InterPro:IPR014726
PANTHER:PTHR13691 ChiTaRS:RPL8 HGNC:HGNC:10368 EMBL:AF235103
IPI:IPI01015034 ProteinModelPortal:E9PKU4 SMR:E9PKU4
Ensembl:ENST00000533397 ArrayExpress:E9PKU4 Bgee:E9PKU4
Uniprot:E9PKU4
Length = 235
Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 90/138 (65%), Positives = 115/138 (83%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 60
MGRVIR QRKGAGSVF++H HRKG AR R++DF ER+GY+KG++ +IIHDPGRGAPLA+
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 61 VTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
V FR P+R++ + ELF+AAEG++TGQFVYCG+KA L +GNVLP+ ++PEG +VC +E
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 121 GDRGVFARCSGDYAVVIS 138
GDRG AR SG+YA VIS
Sbjct: 121 GDRGKLARASGNYATVIS 138
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 65/109 (59%), Positives = 79/109 (72%)
Query: 131 GDYAVVISHNPDNDTTRIKLPSGA-KKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKF 189
G + P D ++ SG ++ S RA++G VAGGGR +KP+LKAG AYHK+
Sbjct: 110 GTIVCCLEEKP-GDRGKLARASGNYATVISSANRAVVGVVAGGGRIDKPILKAGRAYHKY 168
Query: 190 RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 238
+ KRNCWP+VRGVAMNPVEHP GGGNHQHIG ST+RRDAP G+KVGLI
Sbjct: 169 KAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLI 217
>UNIPROTKB|K7GNY4 [details] [associations]
symbol:RPL8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 PROSITE:PS00467 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
GeneTree:ENSGT00390000009907 EMBL:CU468612
Ensembl:ENSSSCT00000035638 Uniprot:K7GNY4
Length = 236
Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 90/138 (65%), Positives = 115/138 (83%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 60
MGRVIR QRKGAGSVF++H HRKG AR R++DF ER+GY+KG++ +IIHDPGRGAPLA+
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 61 VTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
V FR P+R++ + ELF+AAEG++TGQFVYCG+KA L +GNVLP+ ++PEG +VC +E
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 121 GDRGVFARCSGDYAVVIS 138
GDRG AR SG+YA VIS
Sbjct: 121 GDRGKLARASGNYATVIS 138
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 65/109 (59%), Positives = 79/109 (72%)
Query: 131 GDYAVVISHNPDNDTTRIKLPSGA-KKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKF 189
G + P D ++ SG ++ S RA++G VAGGGR +KP+LKAG AYHK+
Sbjct: 110 GTIVCCLEEKP-GDRGKLARASGNYATVISSANRAVVGVVAGGGRIDKPILKAGRAYHKY 168
Query: 190 RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 238
+ KRNCWP+VRGVAMNPVEHP GGGNHQHIG ST+RRDAP G+KVGLI
Sbjct: 169 KAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLI 217
>UNIPROTKB|F1LU36 [details] [associations]
symbol:F1LU36 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR002171
InterPro:IPR022669 Pfam:PF03947 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
InterPro:IPR014726 PANTHER:PTHR13691 GeneTree:ENSGT00390000009907
IPI:IPI00566668 Ensembl:ENSRNOT00000046734 Uniprot:F1LU36
Length = 205
Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 92/199 (46%), Positives = 124/199 (62%)
Query: 37 RNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVY--CGRKA 94
++GY+KG++ IIHDPG PL +V +P+R+ K+ A G + C
Sbjct: 1 QHGYIKGIVKGIIHDPGHD-PLVKVVL-NPYRF---KKWMDGAVHRSRGNLCWTVC---V 52
Query: 95 TLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGA 154
L +GNVLP+R++PEG C +E GD G + +Y VISHNP+ TR+KLPSG
Sbjct: 53 QLNIGNVLPVRTMPEGTNQCCLEEEPGDSGKLS----NYTTVISHNPETKKTRMKLPSG- 107
Query: 155 KKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG 214
KK++ S + + G VAGG +K +LKAG AY K++ +RNCW VR VAMN VEHP GGG
Sbjct: 108 KKVISSANKGVAGVVAGGRSIDKLILKAGRAYLKYKAERNCWACVRDVAMN-VEHPFGGG 166
Query: 215 NHQHIGHASTVRRDAPPGQ 233
NHQHI S ++RDAP G+
Sbjct: 167 NHQHISKPSIIQRDAPAGR 185
>UNIPROTKB|K7GNM9 [details] [associations]
symbol:RPL8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002171 InterPro:IPR022666
Pfam:PF00181 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
PANTHER:PTHR13691 GeneTree:ENSGT00390000009907 EMBL:CU468612
Ensembl:ENSSSCT00000035195 Uniprot:K7GNM9
Length = 114
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 62/103 (60%), Positives = 80/103 (77%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 60
MGRVIR QRKGAGSVF++H HRKG AR R++DF ER+GY+KG++ +IIHDPGRGAPLA+
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 61 VTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLP 103
V FR P+R++ + ELF+AAEG++TG V G G +LP
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGHLV-TGASWPEPRGTMLP 102
>UNIPROTKB|P60422 [details] [associations]
symbol:rplB species:83333 "Escherichia coli K-12"
[GO:0008270 "zinc ion binding" evidence=IDA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0015934 "large ribosomal
subunit" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR002171
InterPro:IPR005880 InterPro:IPR022666 InterPro:IPR022669
InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158
PROSITE:PS00467 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006412 GO:GO:0016740 GO:GO:0008270
EMBL:U18997 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0019843 GO:GO:0015934 Gene3D:2.30.30.30
InterPro:IPR014722 PDB:2VHM PDBsum:2VHM PDB:2RDO PDBsum:2RDO
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
TIGRFAMs:TIGR01171 HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886
PDB:3J0T PDB:3J0W PDB:3J0Y PDB:3J11 PDB:3J12 PDB:3J14 PDB:3SGF
PDB:3UOS PDBsum:3J0T PDBsum:3J0W PDBsum:3J0Y PDBsum:3J11
PDBsum:3J12 PDBsum:3J14 PDBsum:3SGF PDBsum:3UOS PDB:1P85 PDB:1P86
PDB:1VS6 PDB:1VS8 PDB:1VT2 PDB:2AW4 PDB:2AWB PDB:2GYA PDB:2GYC
PDB:2I2T PDB:2I2V PDB:2J28 PDB:2QAM PDB:2QAO PDB:2QBA PDB:2QBC
PDB:2QBE PDB:2QBG PDB:2QBI PDB:2QBK PDB:2QOV PDB:2QOX PDB:2QOZ
PDB:2QP1 PDB:2VHN PDB:2WWQ PDB:2Z4L PDB:2Z4N PDB:3DF2 PDB:3DF4
PDB:3E1B PDB:3E1D PDB:3FIK PDB:3I1N PDB:3I1P PDB:3I1R PDB:3I1T
PDB:3I20 PDB:3I22 PDB:3IZT PDB:3IZU PDB:3J01 PDB:3J19 PDB:3KCR
PDB:3OAS PDB:3OAT PDB:3OFC PDB:3OFD PDB:3OFQ PDB:3OFR PDB:3OFZ
PDB:3OG0 PDB:3ORB PDB:3R8S PDB:3R8T PDB:487D PDB:4GAR PDB:4GAU
PDBsum:1P85 PDBsum:1P86 PDBsum:1VS6 PDBsum:1VS8 PDBsum:1VT2
PDBsum:2AW4 PDBsum:2AWB PDBsum:2GYA PDBsum:2GYC PDBsum:2I2T
PDBsum:2I2V PDBsum:2J28 PDBsum:2QAM PDBsum:2QAO PDBsum:2QBA
PDBsum:2QBC PDBsum:2QBE PDBsum:2QBG PDBsum:2QBI PDBsum:2QBK
PDBsum:2QOV PDBsum:2QOX PDBsum:2QOZ PDBsum:2QP1 PDBsum:2VHN
PDBsum:2WWQ PDBsum:2Z4L PDBsum:2Z4N PDBsum:3DF2 PDBsum:3DF4
PDBsum:3E1B PDBsum:3E1D PDBsum:3FIK PDBsum:3I1N PDBsum:3I1P
PDBsum:3I1R PDBsum:3I1T PDBsum:3I20 PDBsum:3I22 PDBsum:3IZT
PDBsum:3IZU PDBsum:3J01 PDBsum:3J19 PDBsum:3KCR PDBsum:3OAS
PDBsum:3OAT PDBsum:3OFC PDBsum:3OFD PDBsum:3OFQ PDBsum:3OFR
PDBsum:3OFZ PDBsum:3OG0 PDBsum:3ORB PDBsum:3R8S PDBsum:3R8T
PDBsum:487D PDBsum:4GAR PDBsum:4GAU PDB:3BBX PDBsum:3BBX
EMBL:X02613 OMA:STIHCIE ProtClustDB:PRK09374 PANTHER:PTHR13691:SF5
PIR:E23129 RefSeq:NP_417776.1 RefSeq:YP_492115.1
ProteinModelPortal:P60422 SMR:P60422 DIP:DIP-35747N IntAct:P60422
MINT:MINT-1322809 PaxDb:P60422 PRIDE:P60422
EnsemblBacteria:EBESCT00000003048 EnsemblBacteria:EBESCT00000015239
GeneID:12932295 GeneID:947820 KEGG:ecj:Y75_p3859 KEGG:eco:b3317
PATRIC:32122066 EchoBASE:EB0858 EcoGene:EG10865
BioCyc:EcoCyc:EG10865-MONOMER BioCyc:ECOL316407:JW3279-MONOMER
EvolutionaryTrace:P60422 Genevestigator:P60422 Uniprot:P60422
Length = 273
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 71/208 (34%), Positives = 107/208 (51%)
Query: 20 THHRKGPAR--FRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFV 77
T H G + +R +DF + V+ + +DP R A +A V ++ ++ +
Sbjct: 51 TRHIGGGHKQAYRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYK-----DGERRYIL 105
Query: 78 AAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVI 137
A +G+ G + G A + GN LP+R+IP G+ V NVE G G AR +G Y ++
Sbjct: 106 APKGLKAGDQIQSGVDAAIKPGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIV 165
Query: 138 SHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWP 197
+ D ++L SG + V + CRA +G+V + L KAG A ++R R P
Sbjct: 166 AR--DGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAA--RWRGVR---P 218
Query: 198 KVRGVAMNPVEHPHGGGNHQHIG-HAST 224
VRG AMNPV+HPHGGG ++ G H T
Sbjct: 219 TVRGTAMNPVDHPHGGGEGRNFGKHPVT 246
>TIGR_CMR|SO_0234 [details] [associations]
symbol:SO_0234 "ribosomal protein L2" species:211586
"Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR002171 InterPro:IPR005880 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 PROSITE:PS00467 GO:GO:0006412 GO:GO:0016740
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843
GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
TIGRFAMs:TIGR01171 HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886
OMA:STIHCIE ProtClustDB:PRK09374 PANTHER:PTHR13691:SF5
RefSeq:NP_715874.1 ProteinModelPortal:Q8EK65 SMR:Q8EK65
GeneID:1168117 KEGG:son:SO_0234 PATRIC:23520161 Uniprot:Q8EK65
Length = 274
Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 75/214 (35%), Positives = 105/214 (49%)
Query: 9 RKGAGSVFKSHTH--HRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHP 66
R G + H H++ +R +DF + I + +DP R A +A V +
Sbjct: 43 RNNTGRITVRHVGGGHKQ---HYRLIDFKRDKDGIPAKIERLEYDPNRTAHIALVLYA-- 97
Query: 67 FRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVF 126
++ +AA+GM G + G +A + GN +PLR+IP G+VV VE G
Sbjct: 98 ---DGERRYILAAKGMQAGDKIQSGVEAEIKTGNAMPLRNIPVGSVVHAVEMKPGKGAQI 154
Query: 127 ARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAY 186
AR +G Y V++ D ++L SG + VP CRA G+V G E L + G A
Sbjct: 155 ARSAGAYVQVVAR--DGAYATLRLRSGEMRKVPVDCRATFGEV---GNAEHMLRQLGKAG 209
Query: 187 HKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 220
K R R P VRGVAMNPV+HPHGGG + G
Sbjct: 210 AK-RW-RGIRPTVRGVAMNPVDHPHGGGEGRTSG 241
>TIGR_CMR|BA_0113 [details] [associations]
symbol:BA_0113 "ribosomal protein L2" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR002171 InterPro:IPR005880 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 PROSITE:PS00467 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0006412 GO:GO:0016740 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843
GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
TIGRFAMs:TIGR01171 HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886
OMA:STIHCIE ProtClustDB:PRK09374 PANTHER:PTHR13691:SF5
RefSeq:NP_842681.1 RefSeq:YP_016718.1 RefSeq:YP_026399.1
ProteinModelPortal:Q81VS7 SMR:Q81VS7 DNASU:1087436
EnsemblBacteria:EBBACT00000013045 EnsemblBacteria:EBBACT00000017422
EnsemblBacteria:EBBACT00000020733 GeneID:1087436 GeneID:2819234
GeneID:2850447 KEGG:ban:BA_0113 KEGG:bar:GBAA_0113 KEGG:bat:BAS0113
BioCyc:BANT260799:GJAJ-124-MONOMER
BioCyc:BANT261594:GJ7F-126-MONOMER Uniprot:Q81VS7
Length = 276
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 72/221 (32%), Positives = 109/221 (49%)
Query: 7 AQRKGAGSVFKSHTHHRKG--PARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFR 64
+++ G + K H+ G ++R +DF + G + I +DP R A +A + +
Sbjct: 38 SKKAGRNNQGKITVRHQGGGHKRQYRIIDFKRNKDGIPGRVATIEYDPNRSANIALINY- 96
Query: 65 HPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRG 124
+K +A + + G + G +A + +GN LPL +IP G VV N+E G G
Sbjct: 97 ----VDGEKRYILAPKNLEVGMEIMSGAEADIKIGNALPLINIPVGTVVHNIELKPGRGG 152
Query: 125 VFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGN 184
R +G A V+ + ++L SG ++V S CRA +GQV G L+K G
Sbjct: 153 QLVRSAGTSAQVLGK--EGKYVLVRLTSGEVRLVLSACRATVGQV---GNESHELIKIGK 207
Query: 185 AYH-KFRVKRNCWPKVRGVAMNPVEHPHGGGNHQH-IGHAS 223
A ++ KR P VRG MNPV+HPHGGG + IG S
Sbjct: 208 AGRSRWLGKR---PTVRGSVMNPVDHPHGGGEGRSPIGRKS 245
>TIGR_CMR|GSU_2854 [details] [associations]
symbol:GSU_2854 "ribosomal protein L2" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR002171
InterPro:IPR005880 InterPro:IPR022666 InterPro:IPR022669
InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158
PROSITE:PS00467 GO:GO:0006412 GO:GO:0016740 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843 GO:GO:0015934
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 Gene3D:4.10.950.10 HAMAP:MF_01320_B
InterPro:IPR014726 PANTHER:PTHR13691 TIGRFAMs:TIGR01171
HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886 OMA:STIHCIE
ProtClustDB:PRK09374 PANTHER:PTHR13691:SF5 RefSeq:NP_953897.1
ProteinModelPortal:P60401 SMR:P60401 GeneID:2685862
KEGG:gsu:GSU2854 PATRIC:22028555
BioCyc:GSUL243231:GH27-2828-MONOMER Uniprot:P60401
Length = 274
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 69/214 (32%), Positives = 106/214 (49%)
Query: 9 RKGAGSVFKSHTH--HRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHP 66
R G + H H+K ++R +DF + + I +DP R A +A + +
Sbjct: 43 RNSFGRITARHIGGGHKK---KYRIIDFRRNKVEVPAKVASIEYDPNRSARIALLHYA-- 97
Query: 67 FRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVF 126
K +A + G + A + GN LPLR+IP G ++ N+E +G G
Sbjct: 98 ---DGAKRYILAPLDLKVGDSIVASSNADIKPGNALPLRAIPLGTIIHNIELKIGKGGQL 154
Query: 127 ARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAY 186
AR +G +A +++ + ++KLPSG ++V C A IGQV + KAG +
Sbjct: 155 ARSAGTFAQLMAK--EGKYAQVKLPSGEVRMVLLDCMATIGQVGNIDHENVSIGKAGRS- 211
Query: 187 HKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 220
++ +R PKVRGVAMNPV+HPHGGG + G
Sbjct: 212 -RWLGRR---PKVRGVAMNPVDHPHGGGEGRTSG 241
>TIGR_CMR|ECH_0412 [details] [associations]
symbol:ECH_0412 "ribosomal protein L2" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR002171 InterPro:IPR005880 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 PROSITE:PS00467 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0006412 GO:GO:0016740 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843
GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
TIGRFAMs:TIGR01171 HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886
ProtClustDB:PRK09374 PANTHER:PTHR13691:SF5 OMA:LVRQECM
RefSeq:YP_507230.1 ProteinModelPortal:Q2GH53 SMR:Q2GH53
STRING:Q2GH53 GeneID:3927141 KEGG:ech:ECH_0412 PATRIC:20576301
BioCyc:ECHA205920:GJNR-413-MONOMER Uniprot:Q2GH53
Length = 276
Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 76/224 (33%), Positives = 112/224 (50%)
Query: 3 RVIRAQRKGAGSVFKSHTHHRKGPAR-FRSLDFGERNGYLKGVITEIIHDPGRGAPLARV 61
++ R R G + + H +G R +R +DF + + + +DP R A +A +
Sbjct: 37 KISRGGRNSRGVI--TVRHRGRGHKRLYRVVDFKRNKVGVSATVERLEYDPNRTAFIALL 94
Query: 62 TFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVG 121
++ +K +A G+ G V G A ++ GN L L+SIP G V NVE G
Sbjct: 95 SYD-----DGEKSYIIAPNGLKKGDVVISGDGADILPGNCLLLKSIPVGTFVHNVELRPG 149
Query: 122 DRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLK 181
+ GV AR +G YA ++S D ++L SG + V S CRA IG V+ L K
Sbjct: 150 NGGVIARSAGTYAQLMSK--DGMYVLLRLSSGEIRKVLSDCRATIGIVSNLDNQNVKLGK 207
Query: 182 AGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTV 225
AG + ++ R P VRGVAMNP++HPHGGG + G + V
Sbjct: 208 AGRS--RWLGIR---PTVRGVAMNPIDHPHGGGEGKTSGGRNPV 246
>GENEDB_PFALCIPARUM|PF11_0337 [details] [associations]
symbol:PF11_0337 "50S ribosomal protein L2,
putative" species:5833 "Plasmodium falciparum" [GO:0000315
"organellar large ribosomal subunit" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0020011 "apicoplast"
evidence=ISS] InterPro:IPR002171 InterPro:IPR005880
InterPro:IPR022666 InterPro:IPR022669 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 GO:GO:0005739 GO:GO:0006412 GO:GO:0016740
GO:GO:0003723 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014186 GO:GO:0015934 Gene3D:2.30.30.30
InterPro:IPR014722 GO:GO:0020011 InterPro:IPR008991 SUPFAM:SSF50104
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
TIGRFAMs:TIGR01171 HOGENOM:HOG000232982 PANTHER:PTHR13691:SF5
HSSP:P04257 RefSeq:XP_001348008.1 ProteinModelPortal:Q8II37
SMR:Q8II37 EnsemblProtists:PF11_0337:mRNA GeneID:810884
KEGG:pfa:PF11_0337 EuPathDB:PlasmoDB:PF3D7_1132700 OMA:NEYATIK
ProtClustDB:PTZ00031 Uniprot:Q8II37
Length = 333
Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 74/212 (34%), Positives = 106/212 (50%)
Query: 6 RAQRKGAGSVFKSHTHHRKG--PARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTF 63
R + G +V K HR G R R +DF + + I +DP R A +A +
Sbjct: 85 RIKNSGRNNVGKITVRHRGGGHAQRLRFIDFKRSRKDIYSTVLRIEYDPSRSAHIALI-- 142
Query: 64 RHPFRYQHQKELFVAAEGMYT-GQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGD 122
+Y+ ++ A + G + + A + GN LPL++IP G+++ N+E G
Sbjct: 143 ----QYEDGVLSYILAPLLLRPGDKIIASKYANINPGNSLPLQNIPVGSIIHNIEMRPGA 198
Query: 123 RGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKA 182
G R +G YA +IS DN+ IKL S + P C A IGQV+ R + L KA
Sbjct: 199 GGQLIRAAGTYATIISK--DNEYATIKLKSTEIRKFPLQCWATIGQVSNLERHMRILGKA 256
Query: 183 GNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG 214
G +++ KR P VRGVAMNP +HPHGGG
Sbjct: 257 G--VNRWLGKR---PVVRGVAMNPSKHPHGGG 283
>UNIPROTKB|P0C495 [details] [associations]
symbol:rpl2-A "50S ribosomal protein L2, chloroplastic"
species:4530 "Oryza sativa" [GO:0009536 "plastid" evidence=IC]
InterPro:IPR002171 InterPro:IPR005880 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 PROSITE:PS00467 GO:GO:0009507 GO:GO:0009536
GO:GO:0016020 GO:GO:0006412 GO:GO:0016740 GO:GO:0003723
EMBL:AY522331 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
TIGRFAMs:TIGR01171 ProteinModelPortal:P0C495 SMR:P0C495
PRIDE:P0C495 Gramene:P0C495 HOGENOM:HOG000232982
Genevestigator:P0C495 Uniprot:P0C495
Length = 273
Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 71/211 (33%), Positives = 98/211 (46%)
Query: 10 KGAGSVFKSHTHHRKGPAR--FRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPF 67
KG S HR G + +R +DF + G I I +DP R A + + +
Sbjct: 39 KGRNSRGIITARHRGGGHKRLYRKIDFRRNQKDISGRIVTIEYDPNRNAYICLIHYG--- 95
Query: 68 RYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFA 127
+K + G G + G K + +GN LPL +P G + N+E G G A
Sbjct: 96 --DGEKGYILHPRGAIIGDTIVSGTKVPISMGNALPLTDMPLGTAIHNIEITRGRGGQLA 153
Query: 128 RCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYH 187
R +G A +I+ + T R LPSG ++V C A +GQV G +K L +AG+
Sbjct: 154 RAAGAVAKLIAKEGKSATLR--LPSGEVRLVSQNCLATVGQVGNVGVNQKSLGRAGS--- 208
Query: 188 KFRVKRNCW----PKVRGVAMNPVEHPHGGG 214
CW P VRGV MNPV+HPHGGG
Sbjct: 209 ------KCWLGKRPVVRGVVMNPVDHPHGGG 233
>UNIPROTKB|P0C496 [details] [associations]
symbol:rpl2-A "50S ribosomal protein L2, chloroplastic"
species:39946 "Oryza sativa Indica Group" [GO:0009536 "plastid"
evidence=IC] InterPro:IPR002171 InterPro:IPR005880
InterPro:IPR022666 InterPro:IPR022669 InterPro:IPR022671
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
GO:GO:0009507 GO:GO:0009536 GO:GO:0016020 GO:GO:0006412
GO:GO:0016740 GO:GO:0003723 EMBL:AY522329 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0015934
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 Gene3D:4.10.950.10 HAMAP:MF_01320_B
InterPro:IPR014726 PANTHER:PTHR13691 TIGRFAMs:TIGR01171
RefSeq:YP_654244.1 RefSeq:YP_654261.1 ProteinModelPortal:P0C496
SMR:P0C496 PRIDE:P0C496 GeneID:4126865 GeneID:4126903
Gramene:P0C496 ProtClustDB:CLSC858538 Uniprot:P0C496
Length = 273
Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 71/211 (33%), Positives = 98/211 (46%)
Query: 10 KGAGSVFKSHTHHRKGPAR--FRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPF 67
KG S HR G + +R +DF + G I I +DP R A + + +
Sbjct: 39 KGRNSRGIITARHRGGGHKRLYRKIDFRRNQKDISGRIVTIEYDPNRNAYICLIHYG--- 95
Query: 68 RYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFA 127
+K + G G + G K + +GN LPL +P G + N+E G G A
Sbjct: 96 --DGEKGYILHPRGAIIGDTIVSGTKVPISMGNALPLTDMPLGTAIHNIEITRGRGGQLA 153
Query: 128 RCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYH 187
R +G A +I+ + T R LPSG ++V C A +GQV G +K L +AG+
Sbjct: 154 RAAGAVAKLIAKEGKSATLR--LPSGEVRLVSQNCLATVGQVGNVGVNQKSLGRAGS--- 208
Query: 188 KFRVKRNCW----PKVRGVAMNPVEHPHGGG 214
CW P VRGV MNPV+HPHGGG
Sbjct: 209 ------KCWLGKRPVVRGVVMNPVDHPHGGG 233
>UNIPROTKB|P0C497 [details] [associations]
symbol:rpl2-A "50S ribosomal protein L2, chloroplastic"
species:39947 "Oryza sativa Japonica Group" [GO:0009536 "plastid"
evidence=IC] InterPro:IPR002171 InterPro:IPR005880
InterPro:IPR022666 InterPro:IPR022669 InterPro:IPR022671
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
GO:GO:0009507 GO:GO:0009536 GO:GO:0016020 GO:GO:0006412
GO:GO:0016740 GO:GO:0003723 EMBL:X15901 EMBL:AY522330
GenomeReviews:AY522330_GR GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0015934 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104 EMBL:M22826
EMBL:L40578 ProtClustDB:CHL00052 Gene3D:4.10.950.10
HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
TIGRFAMs:TIGR01171 PIR:JQ0270 RefSeq:NP_039427.2 RefSeq:NP_039463.2
ProteinModelPortal:P0C497 SMR:P0C497 STRING:P0C497 GeneID:3131421
GeneID:3131424 KEGG:osa:3131421 KEGG:osa:3131424 Gramene:P0C497
eggNOG:COG0090 KO:K02886 Uniprot:P0C497
Length = 273
Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 71/211 (33%), Positives = 98/211 (46%)
Query: 10 KGAGSVFKSHTHHRKGPAR--FRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPF 67
KG S HR G + +R +DF + G I I +DP R A + + +
Sbjct: 39 KGRNSRGIITARHRGGGHKRLYRKIDFRRNQKDISGRIVTIEYDPNRNAYICLIHYG--- 95
Query: 68 RYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFA 127
+K + G G + G K + +GN LPL +P G + N+E G G A
Sbjct: 96 --DGEKGYILHPRGAIIGDTIVSGTKVPISMGNALPLTDMPLGTAIHNIEITRGRGGQLA 153
Query: 128 RCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYH 187
R +G A +I+ + T R LPSG ++V C A +GQV G +K L +AG+
Sbjct: 154 RAAGAVAKLIAKEGKSATLR--LPSGEVRLVSQNCLATVGQVGNVGVNQKSLGRAGS--- 208
Query: 188 KFRVKRNCW----PKVRGVAMNPVEHPHGGG 214
CW P VRGV MNPV+HPHGGG
Sbjct: 209 ------KCWLGKRPVVRGVVMNPVDHPHGGG 233
>UNIPROTKB|Q6EN83 [details] [associations]
symbol:rpl2-A "50S ribosomal protein L2, chloroplastic"
species:4536 "Oryza nivara" [GO:0009536 "plastid" evidence=IC]
InterPro:IPR002171 InterPro:IPR005880 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 PROSITE:PS00467 GO:GO:0009507 GO:GO:0009536
GO:GO:0006412 GO:GO:0016740 GO:GO:0003723 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 EMBL:AP006728
GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 RefSeq:YP_052793.1
RefSeq:YP_052839.1 ProteinModelPortal:Q6EN83 SMR:Q6EN83
GeneID:2885923 GeneID:2885924 Gramene:Q6EN83 ProtClustDB:CHL00052
Gene3D:4.10.950.10 HAMAP:MF_01320_B InterPro:IPR014726
PANTHER:PTHR13691 TIGRFAMs:TIGR01171 Uniprot:Q6EN83
Length = 273
Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 71/211 (33%), Positives = 98/211 (46%)
Query: 10 KGAGSVFKSHTHHRKGPAR--FRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPF 67
KG S HR G + +R +DF + G I I +DP R A + + +
Sbjct: 39 KGRNSRGIITARHRGGGHKRLYRKIDFRRNQKDISGRIVTIEYDPNRNAYICLIHYG--- 95
Query: 68 RYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFA 127
+K + G G + G K + +GN LPL +P G + N+E G G A
Sbjct: 96 --DGEKGYILHPRGAIIGDTIVSGTKVPISMGNALPLTDMPLGTAIHNIEITRGRGGQLA 153
Query: 128 RCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYH 187
R +G A +I+ + T R LPSG ++V C A +GQV G +K L +AG+
Sbjct: 154 RAAGAVAKLIAKEGKSATLR--LPSGEVRLVSQNCLATVGQVGNVGVNQKSLGRAGS--- 208
Query: 188 KFRVKRNCW----PKVRGVAMNPVEHPHGGG 214
CW P VRGV MNPV+HPHGGG
Sbjct: 209 ------KCWLGKRPVVRGVVMNPVDHPHGGG 233
>UNIPROTKB|Q8II37 [details] [associations]
symbol:PF11_0337 "Mitochondrial ribosomal protein L2"
species:36329 "Plasmodium falciparum 3D7" [GO:0005739
"mitochondrion" evidence=ISS] [GO:0020011 "apicoplast"
evidence=ISS] InterPro:IPR002171 InterPro:IPR005880
InterPro:IPR022666 InterPro:IPR022669 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 GO:GO:0005739 GO:GO:0006412 GO:GO:0016740
GO:GO:0003723 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014186 GO:GO:0015934 Gene3D:2.30.30.30
InterPro:IPR014722 GO:GO:0020011 InterPro:IPR008991 SUPFAM:SSF50104
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
TIGRFAMs:TIGR01171 HOGENOM:HOG000232982 PANTHER:PTHR13691:SF5
HSSP:P04257 RefSeq:XP_001348008.1 ProteinModelPortal:Q8II37
SMR:Q8II37 EnsemblProtists:PF11_0337:mRNA GeneID:810884
KEGG:pfa:PF11_0337 EuPathDB:PlasmoDB:PF3D7_1132700 OMA:NEYATIK
ProtClustDB:PTZ00031 Uniprot:Q8II37
Length = 333
Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 74/212 (34%), Positives = 106/212 (50%)
Query: 6 RAQRKGAGSVFKSHTHHRKG--PARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTF 63
R + G +V K HR G R R +DF + + I +DP R A +A +
Sbjct: 85 RIKNSGRNNVGKITVRHRGGGHAQRLRFIDFKRSRKDIYSTVLRIEYDPSRSAHIALI-- 142
Query: 64 RHPFRYQHQKELFVAAEGMYT-GQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGD 122
+Y+ ++ A + G + + A + GN LPL++IP G+++ N+E G
Sbjct: 143 ----QYEDGVLSYILAPLLLRPGDKIIASKYANINPGNSLPLQNIPVGSIIHNIEMRPGA 198
Query: 123 RGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKA 182
G R +G YA +IS DN+ IKL S + P C A IGQV+ R + L KA
Sbjct: 199 GGQLIRAAGTYATIISK--DNEYATIKLKSTEIRKFPLQCWATIGQVSNLERHMRILGKA 256
Query: 183 GNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG 214
G +++ KR P VRGVAMNP +HPHGGG
Sbjct: 257 G--VNRWLGKR---PVVRGVAMNPSKHPHGGG 283
>TIGR_CMR|APH_0283 [details] [associations]
symbol:APH_0283 "ribosomal protein L2" species:212042
"Anaplasma phagocytophilum HZ" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR002171 InterPro:IPR005880 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 PROSITE:PS00467 GO:GO:0006412 GO:GO:0016740
GO:GO:0003735 EMBL:CP000235 GenomeReviews:CP000235_GR
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843
GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
TIGRFAMs:TIGR01171 HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886
RefSeq:YP_504895.1 ProteinModelPortal:Q2GL56 SMR:Q2GL56
STRING:Q2GL56 GeneID:3930337 KEGG:aph:APH_0283 PATRIC:20949140
OMA:STIHCIE ProtClustDB:PRK09374 BioCyc:APHA212042:GHPM-313-MONOMER
PANTHER:PTHR13691:SF5 Uniprot:Q2GL56
Length = 276
Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 71/206 (34%), Positives = 102/206 (49%)
Query: 22 HRKGPAR--FRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAA 79
HR G R +R +DF + V+ + +DP R A LA + + + +A
Sbjct: 53 HRGGGHRRLYRVVDFKRNKEGVPAVVKRLEYDPNRTAFLALIQYE-----DGELSYILAP 107
Query: 80 EGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISH 139
G+ + G + ++ GN L L IP G V NVE VG G+ AR +G YA V+
Sbjct: 108 SGLKVDDVIMSGAGSDVLPGNCLKLSMIPSGTFVHNVEMKVGGGGIIARAAGSYAQVMGR 167
Query: 140 NPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKV 199
D ++L SG + + S CRA +G V+ L KAG + ++ R PKV
Sbjct: 168 --DGAYVMLRLGSGEVRRILSVCRATVGVVSNLDNRNIKLGKAGRS--RWLGLR---PKV 220
Query: 200 RGVAMNPVEHPHGGGNHQHIGHASTV 225
RGVAMNPV+HPHGGG + G ++V
Sbjct: 221 RGVAMNPVDHPHGGGEGKTSGGRNSV 246
>TIGR_CMR|SPO_0484 [details] [associations]
symbol:SPO_0484 "ribosomal protein L2" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042255 "ribosome assembly" evidence=ISS] InterPro:IPR002171
InterPro:IPR005880 InterPro:IPR022666 InterPro:IPR022669
InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158
PROSITE:PS00467 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0006412 GO:GO:0016740 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843 GO:GO:0015934
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 Gene3D:4.10.950.10 HAMAP:MF_01320_B
InterPro:IPR014726 PANTHER:PTHR13691 TIGRFAMs:TIGR01171
HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886 ProtClustDB:PRK09374
PANTHER:PTHR13691:SF5 OMA:LVRQECM RefSeq:YP_165746.1
ProteinModelPortal:Q5LW59 SMR:Q5LW59 GeneID:3195307
KEGG:sil:SPO0484 PATRIC:23374229 Uniprot:Q5LW59
Length = 280
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 68/219 (31%), Positives = 108/219 (49%)
Query: 11 GAGSVFKSHTHHRKGPAR--FRSLDFGERNGY-LKGVITEIIHDPGRGAPLARVTFRHPF 67
G + + + R G A+ +R +DF +RN + + + I +DP R A +A +
Sbjct: 42 GRNNTGRITSRRRGGGAKRLYRIVDF-KRNKFDVAATVERIEYDPNRTAFIALI------ 94
Query: 68 RYQHQKELFVAA-EGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVF 126
+Y+ ++ ++ A + + G V KA + GN +P +P G +V N+E G G
Sbjct: 95 KYEDGEQAYILAPQRLAVGDKVVASAKADIKPGNAMPFSGMPIGTIVHNIEMKPGKGGQI 154
Query: 127 ARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAY 186
AR +G YA + D +I+L SG ++V C A +G V+ + + KAG
Sbjct: 155 ARAAGTYAQFVGR--DGGYAQIRLSSGELRMVRQECMATVGAVSNPDNSNQNYGKAGRMR 212
Query: 187 HKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTV 225
HK P VRGVAMNP++HPHGGG + G + V
Sbjct: 213 HK-----GIRPSVRGVAMNPIDHPHGGGEGRTSGGRTPV 246
>TIGR_CMR|CBU_0241 [details] [associations]
symbol:CBU_0241 "ribosomal protein L2" species:227377
"Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] InterPro:IPR002171 InterPro:IPR005880
InterPro:IPR022666 InterPro:IPR022669 InterPro:IPR022671
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
GO:GO:0006412 GO:GO:0016740 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0019843 GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
TIGRFAMs:TIGR01171 HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886
OMA:STIHCIE ProtClustDB:PRK09374 PANTHER:PTHR13691:SF5
RefSeq:NP_819285.1 ProteinModelPortal:Q83ES1 SMR:Q83ES1
PRIDE:Q83ES1 GeneID:1208122 KEGG:cbu:CBU_0241 PATRIC:17929175
BioCyc:CBUR227377:GJ7S-247-MONOMER Uniprot:Q83ES1
Length = 275
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 71/229 (31%), Positives = 115/229 (50%)
Query: 3 RVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVT 62
R+ +G +V + H++ +R +DF ++G + + +DP R A +A V
Sbjct: 39 RINSRNNQGRITVRRRGGGHKRN---YRIIDFKRDKEGIEGKVERLEYDPNRSAHIALVL 95
Query: 63 FRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGD 122
+ P ++ +A +G++ G V GR+A + GN LPL++IP GA + N+E G
Sbjct: 96 Y--P---DGERRYIIAPKGVHKGSKVVSGREAPIRPGNCLPLQNIPLGATIHNIELKPGK 150
Query: 123 RGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKA 182
R +G A + + + I++ SG + + + CRA IG+V+ + L KA
Sbjct: 151 GAQLVRSAGASAQLAAK--EGIYAIIRMRSGETRKILAVCRACIGEVSNSEHNLRSLGKA 208
Query: 183 GNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPP 231
G ++R +R P VRGVAMNPV+HPHGGG + G V P
Sbjct: 209 GAK--RWRGRR---PTVRGVAMNPVDHPHGGGEGKTSGGRHPVSPTGKP 252
>TIGR_CMR|CPS_0870 [details] [associations]
symbol:CPS_0870 "ribosomal protein L2" species:167879
"Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR002171 InterPro:IPR005880 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 PROSITE:PS00467 GO:GO:0006412 GO:GO:0016740
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843
GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
TIGRFAMs:TIGR01171 HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886
OMA:STIHCIE ProtClustDB:PRK09374 PANTHER:PTHR13691:SF5
RefSeq:YP_267619.1 ProteinModelPortal:Q487Z6 SMR:Q487Z6
STRING:Q487Z6 PRIDE:Q487Z6 GeneID:3519963 KEGG:cps:CPS_0870
PATRIC:21465033 BioCyc:CPSY167879:GI48-956-MONOMER Uniprot:Q487Z6
Length = 274
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 62/192 (32%), Positives = 99/192 (51%)
Query: 29 FRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFV 88
+R +DF + + + +DP R A +A V + ++ +A +G+ G +
Sbjct: 62 YRIVDFKRLKDGIPAKVERLEYDPNRSANIALVLYA-----DGERRYILAPKGLSAGDSI 116
Query: 89 YCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRI 148
G A + GN +PLR+IP G+V+ +E G AR +G YA +++ D +
Sbjct: 117 LSGVGAPIKPGNTMPLRNIPLGSVIHAIELKPGKGAQIARAAGTYAQLVAK--DGAYVTL 174
Query: 149 KLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVE 208
+L SG + + S CRA +G++ + L KAG + ++R R P VRGVAMNPV+
Sbjct: 175 RLRSGEMRKIESDCRATLGEIGNSEHMLRSLGKAGAS--RWRGVR---PTVRGVAMNPVD 229
Query: 209 HPHGGGNHQHIG 220
HPHGGG + G
Sbjct: 230 HPHGGGEGKTSG 241
>UNIPROTKB|Q9KNY7 [details] [associations]
symbol:rplB "50S ribosomal protein L2" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR002171 InterPro:IPR005880
InterPro:IPR022666 InterPro:IPR022669 InterPro:IPR022671
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
GO:GO:0006412 GO:GO:0016740 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0019843 GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
TIGRFAMs:TIGR01171 eggNOG:COG0090 KO:K02886 OMA:STIHCIE
ProtClustDB:PRK09374 PANTHER:PTHR13691:SF5 PIR:C82059
RefSeq:NP_232221.1 ProteinModelPortal:Q9KNY7 SMR:Q9KNY7
PRIDE:Q9KNY7 DNASU:2615610 GeneID:2615610 KEGG:vch:VC2593
PATRIC:20084212 Uniprot:Q9KNY7
Length = 274
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 64/192 (33%), Positives = 97/192 (50%)
Query: 29 FRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFV 88
+R +DF + + + +DP R A +A V + ++ +A +G+ G +
Sbjct: 62 YRLVDFKRTKDGIPAKVERLEYDPNRSANIALVLYA-----DGERRYIIAPKGLQAGDVI 116
Query: 89 YCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRI 148
G A + GN +P+R+IP G+ + NVE G AR +G YA +++ D +
Sbjct: 117 QSGPDAPIKAGNAMPMRNIPVGSTIHNVELTPGKGAQLARSAGAYAQLVAR--DGAYVTL 174
Query: 149 KLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVE 208
+L SG + V S RA IG+V + L KAG A ++R R P VRGV MNPV+
Sbjct: 175 RLRSGEMRKVLSEGRATIGEVGNAEHMLRELGKAGAA--RWRGVR---PTVRGVVMNPVD 229
Query: 209 HPHGGGNHQHIG 220
HPHGGG + G
Sbjct: 230 HPHGGGEGRTSG 241
>TIGR_CMR|VC_2593 [details] [associations]
symbol:VC_2593 "ribosomal protein L2" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR002171 InterPro:IPR005880 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 PROSITE:PS00467 GO:GO:0006412 GO:GO:0016740
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843
GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
TIGRFAMs:TIGR01171 eggNOG:COG0090 KO:K02886 OMA:STIHCIE
ProtClustDB:PRK09374 PANTHER:PTHR13691:SF5 PIR:C82059
RefSeq:NP_232221.1 ProteinModelPortal:Q9KNY7 SMR:Q9KNY7
PRIDE:Q9KNY7 DNASU:2615610 GeneID:2615610 KEGG:vch:VC2593
PATRIC:20084212 Uniprot:Q9KNY7
Length = 274
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 64/192 (33%), Positives = 97/192 (50%)
Query: 29 FRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFV 88
+R +DF + + + +DP R A +A V + ++ +A +G+ G +
Sbjct: 62 YRLVDFKRTKDGIPAKVERLEYDPNRSANIALVLYA-----DGERRYIIAPKGLQAGDVI 116
Query: 89 YCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRI 148
G A + GN +P+R+IP G+ + NVE G AR +G YA +++ D +
Sbjct: 117 QSGPDAPIKAGNAMPMRNIPVGSTIHNVELTPGKGAQLARSAGAYAQLVAR--DGAYVTL 174
Query: 149 KLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVE 208
+L SG + V S RA IG+V + L KAG A ++R R P VRGV MNPV+
Sbjct: 175 RLRSGEMRKVLSEGRATIGEVGNAEHMLRELGKAGAA--RWRGVR---PTVRGVVMNPVD 229
Query: 209 HPHGGGNHQHIG 220
HPHGGG + G
Sbjct: 230 HPHGGGEGRTSG 241
>TIGR_CMR|CHY_2306 [details] [associations]
symbol:CHY_2306 "ribosomal protein L2" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR002171 InterPro:IPR005880
InterPro:IPR022666 InterPro:IPR022669 InterPro:IPR022671
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006412 GO:GO:0016740
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0019843 GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
TIGRFAMs:TIGR01171 HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886
OMA:STIHCIE ProtClustDB:PRK09374 PANTHER:PTHR13691:SF5
RefSeq:YP_361115.1 ProteinModelPortal:Q3A9R9 SMR:Q3A9R9
STRING:Q3A9R9 GeneID:3726958 KEGG:chy:CHY_2306 PATRIC:21277683
BioCyc:CHYD246194:GJCN-2305-MONOMER Uniprot:Q3A9R9
Length = 274
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 67/195 (34%), Positives = 96/195 (49%)
Query: 22 HRKGPAR--FRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAA 79
HR G + +R +DF + + I +DP R A +A + + +K +A
Sbjct: 53 HRGGGHKRMYRIIDFKRNKDGIPAKVVAIEYDPNRTARIALLAYA-----DGEKRYIIAP 107
Query: 80 EGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISH 139
G+ G + G A + VGN LPL +IP G +V N+E + G G R +G A ++
Sbjct: 108 HGLKVGDVLMSGPDADIKVGNALPLANIPVGTLVHNIELYPGKGGQLVRAAGTAAQLLGK 167
Query: 140 NPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKV 199
+ ++LPSG + V CRA IGQV + KAG A ++ R P V
Sbjct: 168 --EGRYAILRLPSGEMRKVLLECRATIGQVGNLEHENITIGKAGRA--RWLGIR---PTV 220
Query: 200 RGVAMNPVEHPHGGG 214
RGV MNPV+HPHGGG
Sbjct: 221 RGVVMNPVDHPHGGG 235
>TIGR_CMR|NSE_0269 [details] [associations]
symbol:NSE_0269 "ribosomal protein L2" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR002171 InterPro:IPR005880 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 PROSITE:PS00467 GO:GO:0006412 GO:GO:0016740
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0019843 EMBL:CP000237 GenomeReviews:CP000237_GR GO:GO:0015934
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 Gene3D:4.10.950.10 HAMAP:MF_01320_B
InterPro:IPR014726 PANTHER:PTHR13691 TIGRFAMs:TIGR01171
HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886 ProtClustDB:PRK09374
PANTHER:PTHR13691:SF5 OMA:LVRQECM RefSeq:YP_506160.1 STRING:Q2GED6
PRIDE:Q2GED6 GeneID:3931693 KEGG:nse:NSE_0269 PATRIC:22680629
BioCyc:NSEN222891:GHFU-296-MONOMER Uniprot:Q2GED6
Length = 279
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 74/216 (34%), Positives = 103/216 (47%)
Query: 9 RKGAGSVFKSHTHHRKGPARFRSLDFGE-RNG---YLKGVITEIIHDPGRGAPLARVTFR 64
R AG + H R G R+R + F +G + K V+ I +DP R A +A V
Sbjct: 43 RNNAGRITVRHRGGR-GKVRYRLISFSRFSSGAPLFTKAVVERIEYDPNRTAFIALV--- 98
Query: 65 HPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRG 124
F+ +A EG+ + + G +PL +P G V NVE G G
Sbjct: 99 RDFK-TGLPSYIIAPEGLKKSDVLSTDVFDDMAPGACMPLGKVPLGTTVHNVELKPGAGG 157
Query: 125 VFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGN 184
R +G A VI+ D + T + LPSG K+++ S C A IG V+ R L KAG
Sbjct: 158 QLVRSAGSSARVIAR--DGNYTLVTLPSGEKRLILSTCHATIGAVSNADRKNTKLGKAGR 215
Query: 185 AYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 220
+ ++ +R P VRGVAMNPV+HP GGG + G
Sbjct: 216 S--RWLGRR---PSVRGVAMNPVDHPMGGGEGKTSG 246
>UNIPROTKB|P95052 [details] [associations]
symbol:rplB "50S ribosomal protein L2" species:1773
"Mycobacterium tuberculosis" [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] InterPro:IPR002171
InterPro:IPR005880 InterPro:IPR022666 InterPro:IPR022669
InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158
PROSITE:PS00467 GO:GO:0005886 GO:GO:0040007 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0006412
GO:GO:0016740 EMBL:BX842574 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843 GO:GO:0015934
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 Gene3D:4.10.950.10 HAMAP:MF_01320_B
InterPro:IPR014726 PANTHER:PTHR13691 TIGRFAMs:TIGR01171
HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886 OMA:STIHCIE
ProtClustDB:PRK09374 PANTHER:PTHR13691:SF5 PIR:C70642
RefSeq:NP_215218.1 RefSeq:NP_335148.1 RefSeq:YP_006514048.1
ProteinModelPortal:P95052 SMR:P95052 PRIDE:P95052
EnsemblBacteria:EBMYCT00000002534 EnsemblBacteria:EBMYCT00000069561
GeneID:13318593 GeneID:888341 GeneID:926021 KEGG:mtc:MT0731
KEGG:mtu:Rv0704 KEGG:mtv:RVBD_0704 PATRIC:18123339
TubercuList:Rv0704 Uniprot:P95052
Length = 280
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 69/217 (31%), Positives = 106/217 (48%)
Query: 9 RKGAGSVFKSHTHHRKGPAR--FRSLDF--GERNGYLKGVITEIIHDPGRGAPLARVTFR 64
R G + + T H+ G + +R +DF +++G + + I +DP R AR+
Sbjct: 40 RGGRNAHGRITTRHKGGGHKRAYRMIDFRRNDKDG-VNAKVAHIEYDPNR---TARIALL 95
Query: 65 HPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRG 124
H +K +A G+ G V G A + GN LPLR+IP G ++ VE G
Sbjct: 96 HYL--DGEKRYIIAPNGLSQGDVVESGANADIKPGNNLPLRNIPAGTLIHAVELRPGGGA 153
Query: 125 VFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGN 184
AR +G ++ + +++PSG + V CRA +G+V G E+ + G
Sbjct: 154 KLARSAGSSIQLLGK--EASYASLRMPSGEIRRVDVRCRATVGEV---GNAEQANINWGK 208
Query: 185 AYH-KFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 220
A +++ KR P VRGV MNPV+HPHGGG + G
Sbjct: 209 AGRMRWKGKR---PSVRGVVMNPVDHPHGGGEGKTSG 242
>UNIPROTKB|P0C8K6 [details] [associations]
symbol:RPL2 "60S ribosomal protein L2, mitochondrial"
species:4530 "Oryza sativa" [GO:0005739 "mitochondrion"
evidence=IC] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
PROSITE:PS00467 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
EMBL:DQ167807 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
InterPro:IPR014726 PANTHER:PTHR13691 RefSeq:YP_002000581.1
ProteinModelPortal:P0C8K6 PRIDE:P0C8K6 GeneID:6450181
KEGG:osa:6450181 Gramene:P0C8K6 HOGENOM:HOG000150660
Genevestigator:P0C8K6 Uniprot:P0C8K6
Length = 502
Score = 217 (81.4 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 53/128 (41%), Positives = 73/128 (57%)
Query: 98 VGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKI 157
VGN +PL I G V ++E H G AR +G YA +I P + ++LPSG +K+
Sbjct: 360 VGNSIPLADIRMGTWVHDIECHPGQGAKLARAAGTYAKIIKE-PASQCL-VRLPSGVEKL 417
Query: 158 VPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQ 217
+ S CRA IG V+ + L KAG + ++ +R P VRGVAMNPV+HPHGGG +
Sbjct: 418 IDSRCRATIGIVSNPNHGARKLRKAGQS--RWSGRR---PIVRGVAMNPVDHPHGGGEGR 472
Query: 218 HIGHASTV 225
G +V
Sbjct: 473 TKGGRPSV 480
Score = 46 (21.3 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 15/53 (28%), Positives = 26/53 (49%)
Query: 11 GAGSVFKSHTHHRKGPARF--RSLDFGERNGYLKGVITEIIHDPGRGAPLARV 61
G S + HR G ++ R +D +R+ G++ I +DP R + +A V
Sbjct: 22 GRNSSGRITVFHRGGGSKRLQRKIDL-KRSTSSIGIVERIEYDPNRSSRIALV 73
>UNIPROTKB|P92812 [details] [associations]
symbol:RPL2 "60S ribosomal protein L2, mitochondrial"
species:39947 "Oryza sativa Japonica Group" [GO:0005739
"mitochondrion" evidence=IC;ISS] InterPro:IPR002171
InterPro:IPR022666 InterPro:IPR022669 InterPro:IPR022671
Pfam:PF00181 Pfam:PF03947 PROSITE:PS00467 GO:GO:0005739
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:BA000029
GenomeReviews:BA000029_GR EMBL:DQ167400 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
eggNOG:COG0090 RefSeq:YP_002000581.1 GeneID:6450181
KEGG:osa:6450181 EMBL:D78336 PIR:T03019 ProteinModelPortal:P92812
STRING:P92812 PRIDE:P92812 Gramene:P92812 Uniprot:P92812
Length = 502
Score = 217 (81.4 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 53/128 (41%), Positives = 73/128 (57%)
Query: 98 VGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKI 157
VGN +PL I G V ++E H G AR +G YA +I P + ++LPSG +K+
Sbjct: 360 VGNSIPLADIRMGTWVHDIECHPGQGAKLARAAGTYAKIIKE-PASQCL-VRLPSGVEKL 417
Query: 158 VPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQ 217
+ S CRA IG V+ + L KAG + ++ +R P VRGVAMNPV+HPHGGG +
Sbjct: 418 IDSRCRATIGIVSNPNHGARKLRKAGQS--RWSGRR---PIVRGVAMNPVDHPHGGGEGR 472
Query: 218 HIGHASTV 225
G +V
Sbjct: 473 TKGGRPSV 480
Score = 46 (21.3 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 15/53 (28%), Positives = 26/53 (49%)
Query: 11 GAGSVFKSHTHHRKGPARF--RSLDFGERNGYLKGVITEIIHDPGRGAPLARV 61
G S + HR G ++ R +D +R+ G++ I +DP R + +A V
Sbjct: 22 GRNSSGRITVFHRGGGSKRLQRKIDL-KRSTSSIGIVERIEYDPNRSSRIALV 73
>UNIPROTKB|Q2F969 [details] [associations]
symbol:RPL2 "60S ribosomal protein L2, mitochondrial"
species:39946 "Oryza sativa Indica Group" [GO:0005739
"mitochondrion" evidence=IC] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
PROSITE:PS00467 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
EMBL:DQ167399 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
InterPro:IPR014726 PANTHER:PTHR13691 RefSeq:YP_514664.1
ProteinModelPortal:Q2F969 PRIDE:Q2F969 GeneID:3950683
Gramene:Q2F969 Uniprot:Q2F969
Length = 502
Score = 217 (81.4 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 53/128 (41%), Positives = 73/128 (57%)
Query: 98 VGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKI 157
VGN +PL I G V ++E H G AR +G YA +I P + ++LPSG +K+
Sbjct: 360 VGNSIPLADIRMGTWVHDIECHPGQGAKLARAAGTYAKIIKE-PASQCL-VRLPSGVEKL 417
Query: 158 VPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQ 217
+ S CRA IG V+ + L KAG + ++ +R P VRGVAMNPV+HPHGGG +
Sbjct: 418 IDSRCRATIGIVSNPNHGARKLRKAGQS--RWSGRR---PIVRGVAMNPVDHPHGGGEGR 472
Query: 218 HIGHASTV 225
G +V
Sbjct: 473 TKGGRPSV 480
Score = 46 (21.3 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 15/53 (28%), Positives = 26/53 (49%)
Query: 11 GAGSVFKSHTHHRKGPARF--RSLDFGERNGYLKGVITEIIHDPGRGAPLARV 61
G S + HR G ++ R +D +R+ G++ I +DP R + +A V
Sbjct: 22 GRNSSGRITVFHRGGGSKRLQRKIDL-KRSTSSIGIVERIEYDPNRSSRIALV 73
>TIGR_CMR|DET_0477 [details] [associations]
symbol:DET_0477 "ribosomal protein L2" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR002171 InterPro:IPR005880 InterPro:IPR022666
InterPro:IPR022669 Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158
PROSITE:PS00467 GO:GO:0006412 GO:GO:0016740 GO:GO:0003735
EMBL:CP000027 GenomeReviews:CP000027_GR Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843 GO:GO:0015934
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 Gene3D:4.10.950.10 HAMAP:MF_01320_B
InterPro:IPR014726 PANTHER:PTHR13691 TIGRFAMs:TIGR01171
HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886 OMA:STIHCIE
ProtClustDB:PRK09374 PANTHER:PTHR13691:SF5 RefSeq:YP_181221.1
ProteinModelPortal:Q3Z978 SMR:Q3Z978 STRING:Q3Z978 GeneID:3230152
KEGG:det:DET0477 PATRIC:21608023 BioCyc:DETH243164:GJNF-477-MONOMER
Uniprot:Q3Z978
Length = 274
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 67/196 (34%), Positives = 94/196 (47%)
Query: 22 HRKGPAR--FRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAA 79
HR G ++ R +DF + G I I +DP R A +A V F +K +A
Sbjct: 53 HRGGGSKTQIRVIDFKRNKLDVPGRIAAIEYDPNRTARIALV-----FYTDGEKRYILAP 107
Query: 80 EGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISH 139
+ G + G A GN LPL +IP G + N+E G G+ R +G A +++
Sbjct: 108 SDLKIGDVIMAGENAEPKSGNALPLSAIPTGTFIHNIELIKGRGGIMVRSAGAAAQLMAK 167
Query: 140 NPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW-PK 198
+ D ++LPSG + V S C A +GQ+ G E L+ G A R + W P
Sbjct: 168 --EGDYALVRLPSGEMRKVRSDCSATVGQI---GNIEHGTLEIGKAG---RNRHLGWRPT 219
Query: 199 VRGVAMNPVEHPHGGG 214
VRG AM+P HPHGGG
Sbjct: 220 VRGSAMSPNNHPHGGG 235
>UNIPROTKB|Q9L0D7 [details] [associations]
symbol:rplB "50S ribosomal protein L2" species:100226
"Streptomyces coelicolor A3(2)" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR002171 InterPro:IPR005880 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 PROSITE:PS00467 GO:GO:0006412 GO:GO:0016740
GO:GO:0003735 EMBL:AL939121 GenomeReviews:AL645882_GR
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843
GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
TIGRFAMs:TIGR01171 HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886
OMA:STIHCIE ProtClustDB:PRK09374 PANTHER:PTHR13691:SF5
RefSeq:NP_628864.1 ProteinModelPortal:Q9L0D7 SMR:Q9L0D7
PhosSite:P11111097 GeneID:1100146 KEGG:sco:SCO4705 PATRIC:23739232
Uniprot:Q9L0D7
Length = 278
Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 73/231 (31%), Positives = 109/231 (47%)
Query: 9 RKGAGSVFKSHTHHRKGPAR-FRSLDFG--ERNGYLKGVITEIIHDPGRGAPLARVTFRH 65
R AG V + H G R +R +DF +++G + + I +DP R AR+ H
Sbjct: 43 RNNAGRV--TVRHQGGGHKRAYRVIDFRRHDKDG-VPAKVAHIEYDPNR---TARIALLH 96
Query: 66 PFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGV 125
+K +A + G V G A + GN L LR+IP G + +E G
Sbjct: 97 --YADGEKRYILAPRNLQQGDRVENGPGADIKPGNNLALRNIPVGTTIHAIELRPGGGAK 154
Query: 126 FARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNA 185
FAR +G +++ + +++PSG ++V CRA +G+V G E+ + G A
Sbjct: 155 FARSAGASVQLLAK--EGTMAHLRMPSGEIRLVDQRCRATVGEV---GNAEQSNINWGKA 209
Query: 186 YHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVG 236
K + P VRGV MNPV+HPHGGG + G V +P G+K G
Sbjct: 210 GRKRWL--GVRPTVRGVVMNPVDHPHGGGEGRTSGGRHPV---SPWGKKEG 255
>TIGR_CMR|CJE_1872 [details] [associations]
symbol:CJE_1872 "ribosomal protein L2" species:195099
"Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] InterPro:IPR002171
InterPro:IPR005880 InterPro:IPR022666 InterPro:IPR022669
InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158
PROSITE:PS00467 GO:GO:0006412 GO:GO:0016740 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843 GO:GO:0015934
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 Gene3D:4.10.950.10 HAMAP:MF_01320_B
InterPro:IPR014726 PANTHER:PTHR13691 TIGRFAMs:TIGR01171
HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886 ProtClustDB:PRK09374
PANTHER:PTHR13691:SF5 RefSeq:YP_179842.1 ProteinModelPortal:Q5HS93
SMR:Q5HS93 STRING:Q5HS93 GeneID:3232499 KEGG:cjr:CJE1872
PATRIC:20045576 OMA:LVRQECM BioCyc:CJEJ195099:GJC0-1911-MONOMER
Uniprot:Q5HS93
Length = 276
Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 62/207 (29%), Positives = 97/207 (46%)
Query: 11 GAGSVFKSHTHHRKGPAR--FRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFR 68
G S + + H++ A+ +R +DF R ++G + I +DP R +A + ++
Sbjct: 42 GRNSYGRITSRHKEAGAKKLYRIIDFKRRKFGIEGKVEAIEYDPYRNCRIALIAYK---- 97
Query: 69 YQHQKELFVAAEGMYTGQFVYCGRKAT-LVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFA 127
+K + G+ G V + GN + L++IP G +V NVE G G
Sbjct: 98 -DGEKRYILQPRGLSVGDIVAAAESGLDIKPGNAMKLKNIPVGTIVHNVELKPGKGGQMI 156
Query: 128 RCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYH 187
R +G YA ++ + ++L SG + V + C A IG+V + KAG H
Sbjct: 157 RSAGAYAQLMGK--EEKYVILRLASGEMRQVLAECMASIGEVGNEEWANVTIGKAGRNRH 214
Query: 188 KFRVKRNCWPKVRGVAMNPVEHPHGGG 214
R P+ RG AMNPV+HPHGGG
Sbjct: 215 -----RGIRPQTRGSAMNPVDHPHGGG 236
>UNIPROTKB|Q9AMK8 [details] [associations]
symbol:rplB "50S ribosomal protein L2" species:42684
"Streptomyces collinus" [GO:0003735 "structural constituent of
ribosome" evidence=IDA] [GO:0006412 "translation" evidence=IDA]
[GO:0015934 "large ribosomal subunit" evidence=IDA]
InterPro:IPR002171 InterPro:IPR005880 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 PROSITE:PS00467 GO:GO:0006412 GO:GO:0016740
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0019843 GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
TIGRFAMs:TIGR01171 PANTHER:PTHR13691:SF5 EMBL:AF324467
ProteinModelPortal:Q9AMK8 SMR:Q9AMK8 Uniprot:Q9AMK8
Length = 278
Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 71/231 (30%), Positives = 109/231 (47%)
Query: 9 RKGAGSVFKSHTHHRKGPAR-FRSLDFG--ERNGYLKGVITEIIHDPGRGAPLARVTFRH 65
R AG + + H G R +R +DF +++G + + I +DP R A +A + +
Sbjct: 43 RNNAGRI--TVRHQGGGHKRAYRIVDFRRHDKDG-VPAKVAHIEYDPNRSARIALLHYA- 98
Query: 66 PFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGV 125
+K +A + G V G A + GN L LR+IP G + +E G
Sbjct: 99 ----DGEKRYILAPRNLQQGDRVENGPGADIKPGNNLALRNIPVGTTIHAIELRPGGGAK 154
Query: 126 FARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNA 185
FAR +G +++ + +++PSG ++V CRA IG+V G E+ + G A
Sbjct: 155 FARSAGASVQLLAK--EGAYAHLRMPSGEIRLVNVRCRATIGEV---GNAEQSNINWGKA 209
Query: 186 YHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVG 236
K + P VRGV MNPV+HPHGGG + G V +P G+ G
Sbjct: 210 GRKRWL--GVRPTVRGVVMNPVDHPHGGGEGRTSGGRHPV---SPWGKPTG 255
>CGD|CAL0005205 [details] [associations]
symbol:orf19.5420 species:5476 "Candida albicans" [GO:0006631
"fatty acid metabolic process" evidence=IEA] InterPro:IPR002171
InterPro:IPR005880 InterPro:IPR022666 InterPro:IPR022669
InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947 PROSITE:PS00467
CGD:CAL0005205 GO:GO:0006412 GO:GO:0016740 GO:GO:0003723
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 EMBL:AACQ01000051
EMBL:AACQ01000050 Gene3D:4.10.950.10 InterPro:IPR014726
PANTHER:PTHR13691 TIGRFAMs:TIGR01171 eggNOG:COG0090
PANTHER:PTHR13691:SF5 RefSeq:XP_717698.1 RefSeq:XP_717792.1
STRING:Q5A7P6 GeneID:3640548 GeneID:3640641 KEGG:cal:CaO19.12875
KEGG:cal:CaO19.5420 Uniprot:Q5A7P6
Length = 368
Score = 207 (77.9 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 47/117 (40%), Positives = 65/117 (55%)
Query: 99 GNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIV 158
GN LPLR +P G+++ N+ GDR R +G + ++S +P+ + IKL SG ++ V
Sbjct: 213 GNCLPLRMLPVGSIIHNIGLRPGDRAQLVRSAGTFGKILSKHPEKNRAVIKLSSGEQRYV 272
Query: 159 PSGCRAMIGQVAGGGRTEKPLLKAGNA-YHKFRVKRNCWPKVRGVAMNPVEHPHGGG 214
C A +G V+ KAG + Y FR PKVRGVAMN +HPHGGG
Sbjct: 273 ILDCHATLGVVSNKEHQLISWGKAGRSRYRGFR------PKVRGVAMNACDHPHGGG 323
>TAIR|locus:505006316 [details] [associations]
symbol:AT2G44065 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA;ISS] [GO:0009507
"chloroplast" evidence=ISM] [GO:0015934 "large ribosomal subunit"
evidence=IEA;ISS] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0006354 "DNA-dependent transcription, elongation" evidence=RCA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=RCA] [GO:0009853 "photorespiration" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
InterPro:IPR002171 InterPro:IPR022669 InterPro:IPR022671
Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467 EMBL:CP002685
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:AC004005
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 Gene3D:4.10.950.10 InterPro:IPR014726
PANTHER:PTHR13691 HSSP:P04257 EMBL:AY063831 EMBL:AY091281
IPI:IPI00538697 RefSeq:NP_566007.1 RefSeq:NP_973685.1
UniGene:At.175 ProteinModelPortal:Q8VZU4 SMR:Q8VZU4 IntAct:Q8VZU4
STRING:Q8VZU4 PRIDE:Q8VZU4 EnsemblPlants:AT2G44065.1
EnsemblPlants:AT2G44065.2 GeneID:819012 KEGG:ath:AT2G44065
TAIR:At2g44065 InParanoid:Q8VZU4 OMA:NIEMNPG PhylomeDB:Q8VZU4
ProtClustDB:CLSN2688921 ArrayExpress:Q8VZU4 Genevestigator:Q8VZU4
Uniprot:Q8VZU4
Length = 214
Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 50/138 (36%), Positives = 70/138 (50%)
Query: 97 VVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKK 156
++G+ +PL + G ++ N+E + G R +G A ++ P IKLPSG K
Sbjct: 58 MIGSSMPLGMMRIGTIIHNIEMNPGQGAKMVRAAGTNAKILKE-PAKGKCLIKLPSGDTK 116
Query: 157 IVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNH 216
+ + CRA IG V+ K L KAG + ++ R PKVRGVAMNP +HPHGGG
Sbjct: 117 WINAKCRATIGTVSNPSHGTKKLYKAGQS--RWLGIR---PKVRGVAMNPCDHPHGGGEG 171
Query: 217 QHIGHASTVRRDAPPGQK 234
+ S R P K
Sbjct: 172 KSKSSGSRGRTSVSPWGK 189
>SGD|S000000776 [details] [associations]
symbol:RML2 "Mitochondrial ribosomal protein of the large
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0005762 "mitochondrial large ribosomal subunit" evidence=TAS]
[GO:0002181 "cytoplasmic translation" evidence=TAS] [GO:0003735
"structural constituent of ribosome" evidence=IEA;TAS] [GO:0006631
"fatty acid metabolic process" evidence=IMP] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0015934 "large ribosomal subunit" evidence=IEA]
InterPro:IPR002171 InterPro:IPR005880 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
PROSITE:PS00467 SGD:S000000776 GO:GO:0016740 GO:GO:0006631
GO:GO:0003723 EMBL:BK006939 GO:GO:0005762 GO:GO:0003735 EMBL:U18779
GO:GO:0002181 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 RefSeq:NP_010867.3 GeneID:856664 KEGG:sce:YEL047C
RefSeq:NP_010864.3 GeneID:856660 KEGG:sce:YEL050C
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
TIGRFAMs:TIGR01171 HOGENOM:HOG000232982 eggNOG:COG0090
PANTHER:PTHR13691:SF5 GeneTree:ENSGT00390000000189
OrthoDB:EOG4W9NCQ PIR:S30827 ProteinModelPortal:P32611 SMR:P32611
DIP:DIP-6812N IntAct:P32611 MINT:MINT-615808 STRING:P32611
PaxDb:P32611 PeptideAtlas:P32611 EnsemblFungi:YEL050C CYGD:YEL050c
OMA:QRGNCLP NextBio:982655 Genevestigator:P32611 GermOnline:YEL050C
Uniprot:P32611
Length = 393
Score = 166 (63.5 bits), Expect = 4.4e-14, Sum P(2) = 4.4e-14
Identities = 43/116 (37%), Positives = 59/116 (50%)
Query: 99 GNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIV 158
GN LP+ IP G ++ NV G F R +G YA V++ P+ ++L SG + V
Sbjct: 238 GNCLPISMIPIGTIIHNVGITPVGPGKFCRSAGTYARVLAKLPEKKKAIVRLQSGEHRYV 297
Query: 159 PSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG 214
A IG V+ + L KAG + ++ P VRGVAMN +HPHGGG
Sbjct: 298 SLEAVATIGVVSNIDHQNRSLGKAGRS-RWLGIR----PTVRGVAMNKCDHPHGGG 348
Score = 62 (26.9 bits), Expect = 4.4e-14, Sum P(2) = 4.4e-14
Identities = 23/92 (25%), Positives = 41/92 (44%)
Query: 4 VIRAQRKGAGSVFKSHTHHRKGPARFRS--LDFGERNGYLKGVITEIIHDPGRGAPLARV 61
V+R + G + K H+ G R R+ +DF G + + I +DPGR + +A +
Sbjct: 125 VVRKKHGGRNNSGKITVRHQGGGHRNRTRLIDFNRWEGGAQ-TVQRIEYDPGRSSHIALL 183
Query: 62 TFRHPFRYQHQKELFVAAEGMYTGQFVYCGRK 93
+H + +A +G+ G V R+
Sbjct: 184 --KH--NTTGELSYIIACDGLRPGDVVESFRR 211
>UNIPROTKB|K7GMQ4 [details] [associations]
symbol:RPL8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002171 Gene3D:2.40.50.140
InterPro:IPR012340 PANTHER:PTHR13691 GeneTree:ENSGT00390000009907
EMBL:CU468612 Ensembl:ENSSSCT00000033716 Uniprot:K7GMQ4
Length = 72
Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 31/48 (64%), Positives = 40/48 (83%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEI 48
MGRVIR QRKGAGSVF++H HRKG AR R++DF ER+GY+KG++ +
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKSL 48
>DICTYBASE|DDB_G0294036 [details] [associations]
symbol:mrpl2 "ribosomal protein L2, mitochondrial"
species:44689 "Dictyostelium discoideum" [GO:0016740 "transferase
activity" evidence=IEA] [GO:0015934 "large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR002171 InterPro:IPR005880
InterPro:IPR022666 InterPro:IPR022669 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 PROSITE:PS00467 dictyBase:DDB_G0294036
GO:GO:0005739 GO:GO:0006412 GO:GO:0016740 GO:GO:0003723
GO:GO:0003735 EMBL:AB000109 GenomeReviews:AB000109_GR
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 EMBL:D21196
GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
InterPro:IPR014726 PANTHER:PTHR13691 TIGRFAMs:TIGR01171
eggNOG:COG0090 PANTHER:PTHR13691:SF5 PIR:T43770 RefSeq:NP_050091.1
HSSP:P04257 ProteinModelPortal:Q23888 STRING:Q23888 GeneID:2193919
KEGG:ddi:DidioMp24 Uniprot:Q23888
Length = 266
Score = 174 (66.3 bits), Expect = 4.8e-13, P = 4.8e-13
Identities = 51/171 (29%), Positives = 84/171 (49%)
Query: 45 ITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCG--RKATLVVGNVL 102
+ I +DP R A +A + Y + ++ + G + + TL VGN
Sbjct: 57 VMRIEYDPNRSAHIALCSILKEGIYFY----VISIAKLEVGSLIITSALKLGTLQVGNTT 112
Query: 103 PLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGC 162
+++IPEG ++ N+E +R +G +++I + + +KL S +++ + C
Sbjct: 113 KIKNIPEGLLINNIELIENSGSKISRAAGTSSLIIKKY-NKKYSLVKLSSKECRLISNEC 171
Query: 163 RAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 213
A IG V+ R K KA +Y + KR P VRG+AMNPV+HPHGG
Sbjct: 172 YATIGTVSNIERKLKQNKKA--SYSR---KRGIRPIVRGLAMNPVDHPHGG 217
>ASPGD|ASPL0000011317 [details] [associations]
symbol:AN3649 species:162425 "Emericella nidulans"
[GO:0015934 "large ribosomal subunit" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0006631
"fatty acid metabolic process" evidence=IEA] InterPro:IPR002171
InterPro:IPR005880 InterPro:IPR022666 InterPro:IPR022669
Pfam:PF00181 Pfam:PF03947 GO:GO:0006412 GO:GO:0016740 GO:GO:0003723
EMBL:BN001302 GO:GO:0003735 EMBL:AACD01000061 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0015934 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
HOGENOM:HOG000232982 eggNOG:COG0090 PANTHER:PTHR13691:SF5
OrthoDB:EOG4W9NCQ OMA:QRGNCLP RefSeq:XP_661253.1 STRING:Q5B731
EnsemblFungi:CADANIAT00005086 GeneID:2873068 KEGG:ani:AN3649.2
Uniprot:Q5B731
Length = 405
Score = 107 (42.7 bits), Expect = 4.3e-12, Sum P(3) = 4.3e-12
Identities = 27/74 (36%), Positives = 38/74 (51%)
Query: 148 IKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPV 207
I+L SG +++ C A IG + + L KAG + N P VRG+AMN
Sbjct: 294 IRLSSGEVRLIHKDCCATIGVASNPNKKYAQLGKAGRSRWL-----NIRPTVRGLAMNAQ 348
Query: 208 EHPHGGGNHQHIGH 221
+HPHGGG + G+
Sbjct: 349 DHPHGGGRGKSKGN 362
Score = 81 (33.6 bits), Expect = 4.3e-12, Sum P(3) = 4.3e-12
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 99 GNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVIS 138
GN LPL +P G+++ NV G G R +G +A VIS
Sbjct: 212 GNCLPLHMVPVGSLIFNVGLRPGGGGQLCRSAGTFATVIS 251
Score = 75 (31.5 bits), Expect = 4.3e-12, Sum P(3) = 4.3e-12
Identities = 25/81 (30%), Positives = 39/81 (48%)
Query: 9 RKGAGSVFKSHTHHRKG-PARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPF 67
R +G V + HH G R R +DF +R+ ++ I HDPGR A +A + +
Sbjct: 107 RNNSGRV--TVRHHGGGHKRRIRMVDF-KRDAPGPHIVERIEHDPGRSAHIALLRSKETG 163
Query: 68 RYQHQKELFVAAEGMYTGQFV 88
+ + +AA+GM G V
Sbjct: 164 KLSY----ILAADGMRAGDVV 180
>UNIPROTKB|F1NY85 [details] [associations]
symbol:MRPL2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0015934 "large ribosomal subunit"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR002171
InterPro:IPR005880 InterPro:IPR022666 InterPro:IPR022669
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 GO:GO:0005739
GO:GO:0006412 GO:GO:0016740 GO:GO:0003723 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0015934
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 Gene3D:4.10.950.10 InterPro:IPR014726
PANTHER:PTHR13691 TIGRFAMs:TIGR01171 OMA:LVRQECM
GeneTree:ENSGT00390000000189 EMBL:AADN02044222 IPI:IPI00579337
Ensembl:ENSGALT00000013999 Uniprot:F1NY85
Length = 259
Score = 168 (64.2 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 54/184 (29%), Positives = 86/184 (46%)
Query: 28 RFRSLDFGERNGYLKGV--ITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTG 85
R+R +DF +R Y +G + + +DP R A +A V + QK +A E M G
Sbjct: 62 RYRMIDF-QRLRYNEGTEKVIAVRYDPCRSADIALVAGGN------QKRWIIATENMQPG 114
Query: 86 QFV----YCGRKATLV-VGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHN 140
+ + GR A L G+ PL ++P G ++CN+E H G + R +G V++
Sbjct: 115 DLIKNSSHIGRMAVLANEGDAYPLGALPVGTLICNLESHPGKGAQYIRAAGTCGVLL--R 172
Query: 141 PDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAG-NAYHKFRVKRNCWPKV 199
N T ++LPS V C A +G+V+ ++ + KAG N + R W +
Sbjct: 173 KVNGTAIVQLPSKRHMQVLETCVATVGRVSNVDHNKRVIGKAGRNRWLGKRPHTGLWHRK 232
Query: 200 RGVA 203
G A
Sbjct: 233 GGWA 236
>POMBASE|SPCC16C4.15 [details] [associations]
symbol:rml2 "mitochondrial ribosomal protein subunit L2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=ISM] [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0005762 "mitochondrial large ribosomal
subunit" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0032543
"mitochondrial translation" evidence=NAS] InterPro:IPR002171
InterPro:IPR005880 InterPro:IPR022666 InterPro:IPR022669
InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947 PROSITE:PS00467
PomBase:SPCC16C4.15 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016740 GO:GO:0003723 GO:GO:0005762 GO:GO:0003735
GO:GO:0032543 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 Gene3D:4.10.950.10 InterPro:IPR014726
PANTHER:PTHR13691 TIGRFAMs:TIGR01171 HOGENOM:HOG000232982
eggNOG:COG0090 PANTHER:PTHR13691:SF5 PIR:T41105 RefSeq:NP_587925.2
HSSP:P60422 STRING:Q9Y7P4 EnsemblFungi:SPCC16C4.15.1 GeneID:2539321
OrthoDB:EOG4W9NCQ NextBio:20800486 Uniprot:Q9Y7P4
Length = 362
Score = 147 (56.8 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 42/123 (34%), Positives = 62/123 (50%)
Query: 99 GNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIV 158
GN PLR IP G V+ + + + R +G A +I+ D ++L SG ++ +
Sbjct: 209 GNCFPLRLIPIGTVIHAIGVNPNQKAKLCRSAGSSARIIAF--DGKYAIVRLQSGEERKI 266
Query: 159 PSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQH 218
A IG V+ + L KAG + ++ R P VRG AMNP +HPHGGG +
Sbjct: 267 LDTSFATIGVVSNIYWQHRQLGKAGRS--RWLGIR---PTVRGTAMNPCDHPHGGGGGKS 321
Query: 219 IGH 221
IG+
Sbjct: 322 IGN 324
Score = 55 (24.4 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 28/109 (25%), Positives = 43/109 (39%)
Query: 4 VIRAQRKGAGSVFKSHTHHRKG--PARFRSLDFGERNGYLKGV--ITEIIHDPGRGAPLA 59
V + ++ G + H+ G R R +DF ER + GV + I +DPGR +A
Sbjct: 87 VAKRKKGGRNETGRITVRHQGGGHKQRIRLVDF-ERK--VPGVHRVIRIEYDPGRSGHIA 143
Query: 60 RVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIP 108
V + K +A +G+ G V R N P+ P
Sbjct: 144 LVEKLNS--ETANKSYILACDGLREGDTVESFRSLLKTGSNGEPVEMDP 190
>UNIPROTKB|K7GL68 [details] [associations]
symbol:RPL8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002171 PANTHER:PTHR13691
GeneTree:ENSGT00390000009907 EMBL:CU468612
Ensembl:ENSSSCT00000033747 Uniprot:K7GL68
Length = 38
Score = 146 (56.5 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 27/38 (71%), Positives = 32/38 (84%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERN 38
MGRVIR QRKGAGSVF++H HRKG AR R++DF ER+
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERH 38
>RGD|1307147 [details] [associations]
symbol:Mrpl2 "mitochondrial ribosomal protein L2" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 Pfam:PF00181 Pfam:PF03947 RGD:1307147
GO:GO:0005739 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 Gene3D:4.10.950.10 InterPro:IPR014726
PANTHER:PTHR13691 eggNOG:COG0090 CTD:51069 HOGENOM:HOG000046229
HOVERGEN:HBG057412 OrthoDB:EOG4H19WF EMBL:BC100081 IPI:IPI00190153
RefSeq:NP_001029308.1 UniGene:Rn.102111 ProteinModelPortal:Q498T4
STRING:Q498T4 PRIDE:Q498T4 GeneID:301240 KEGG:rno:301240
UCSC:RGD:1307147 NextBio:648365 ArrayExpress:Q498T4
Genevestigator:Q498T4 GermOnline:ENSRNOG00000018057 Uniprot:Q498T4
Length = 304
Score = 130 (50.8 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 50/182 (27%), Positives = 79/182 (43%)
Query: 28 RFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQF 87
RFR E + + V+ + +DP R A +A V +K +A E M G
Sbjct: 109 RFRPEKGTEPEPFEEKVVV-VRYDPCRSADIALVAGGS------RKRWIIATENMKAGDT 161
Query: 88 V----YCGRKATLVV-GNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPD 142
+ + GR A G+ PL ++P G ++ NVE G + R +G V++
Sbjct: 162 ILNSNHIGRMAVAAQEGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL--RKV 219
Query: 143 NDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAG-NAYHKFRVKRNCWPKVRG 201
N T I+LPS + V C A +G+V+ ++ + KAG N + R W + G
Sbjct: 220 NGTAIIQLPSKRQMQVLESCTATVGRVSNVNHNQRVIGKAGRNRWLGKRPNSGLWQRKGG 279
Query: 202 VA 203
A
Sbjct: 280 WA 281
>UNIPROTKB|Q498T4 [details] [associations]
symbol:Mrpl2 "39S ribosomal protein L2, mitochondrial"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 Pfam:PF00181 Pfam:PF03947 RGD:1307147
GO:GO:0005739 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 Gene3D:4.10.950.10 InterPro:IPR014726
PANTHER:PTHR13691 eggNOG:COG0090 CTD:51069 HOGENOM:HOG000046229
HOVERGEN:HBG057412 OrthoDB:EOG4H19WF EMBL:BC100081 IPI:IPI00190153
RefSeq:NP_001029308.1 UniGene:Rn.102111 ProteinModelPortal:Q498T4
STRING:Q498T4 PRIDE:Q498T4 GeneID:301240 KEGG:rno:301240
UCSC:RGD:1307147 NextBio:648365 ArrayExpress:Q498T4
Genevestigator:Q498T4 GermOnline:ENSRNOG00000018057 Uniprot:Q498T4
Length = 304
Score = 130 (50.8 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 50/182 (27%), Positives = 79/182 (43%)
Query: 28 RFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQF 87
RFR E + + V+ + +DP R A +A V +K +A E M G
Sbjct: 109 RFRPEKGTEPEPFEEKVVV-VRYDPCRSADIALVAGGS------RKRWIIATENMKAGDT 161
Query: 88 V----YCGRKATLVV-GNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPD 142
+ + GR A G+ PL ++P G ++ NVE G + R +G V++
Sbjct: 162 ILNSNHIGRMAVAAQEGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL--RKV 219
Query: 143 NDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAG-NAYHKFRVKRNCWPKVRG 201
N T I+LPS + V C A +G+V+ ++ + KAG N + R W + G
Sbjct: 220 NGTAIIQLPSKRQMQVLESCTATVGRVSNVNHNQRVIGKAGRNRWLGKRPNSGLWQRKGG 279
Query: 202 VA 203
A
Sbjct: 280 WA 281
>UNIPROTKB|E2RCD7 [details] [associations]
symbol:MRPL2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR002171
InterPro:IPR022666 InterPro:IPR022669 Pfam:PF00181 Pfam:PF03947
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691 CTD:51069
GeneTree:ENSGT00390000000189 OMA:GNRPRSG EMBL:AAEX03008332
RefSeq:XP_532143.2 Ensembl:ENSCAFT00000002798 GeneID:474908
KEGG:cfa:474908 Uniprot:E2RCD7
Length = 306
Score = 130 (50.8 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 50/182 (27%), Positives = 79/182 (43%)
Query: 28 RFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQF 87
RFR + + G + + + +DP R A +A V +K VA E M G
Sbjct: 111 RFRP-ELETKPGPFEEKVIMVRYDPCRSADIALVAGGS------RKRWIVATENMQAGDI 163
Query: 88 V----YCGRKATLV-VGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPD 142
+ + GR A G+ PL ++P G ++ NVE G + R +G V++
Sbjct: 164 ILNSDHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL--RKV 221
Query: 143 NDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAG-NAYHKFRVKRNCWPKVRG 201
N T I+LPS + V C A +G+V+ ++ + KAG N + R W + G
Sbjct: 222 NGTAIIQLPSKRQMQVLETCMATVGRVSNVDHNKRVIGKAGRNRWLGKRPSSGLWHRKGG 281
Query: 202 VA 203
A
Sbjct: 282 WA 283
>UNIPROTKB|Q5T653 [details] [associations]
symbol:MRPL2 "39S ribosomal protein L2, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 Pfam:PF00181 Pfam:PF03947 GO:GO:0005739
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:AL355385 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
eggNOG:COG0090 OMA:LVRQECM CTD:51069 HOGENOM:HOG000046229
HOVERGEN:HBG057412 OrthoDB:EOG4H19WF HSSP:P04257 EMBL:AF132956
EMBL:AK314948 EMBL:BC013685 EMBL:BC020212 EMBL:AB051617
IPI:IPI00411816 RefSeq:NP_057034.2 UniGene:Hs.55041
ProteinModelPortal:Q5T653 SMR:Q5T653 IntAct:Q5T653
MINT:MINT-6492891 STRING:Q5T653 PhosphoSite:Q5T653 DMDM:118573672
PaxDb:Q5T653 PRIDE:Q5T653 DNASU:51069 Ensembl:ENST00000388752
GeneID:51069 KEGG:hsa:51069 UCSC:uc003ots.1 GeneCards:GC06M043068
HGNC:HGNC:14056 HPA:HPA007455 MIM:611822 neXtProt:NX_Q5T653
PharmGKB:PA30949 InParanoid:Q5T653 GenomeRNAi:51069 NextBio:53675
ArrayExpress:Q5T653 Bgee:Q5T653 CleanEx:HS_MRPL2
Genevestigator:Q5T653 GermOnline:ENSG00000112651 Uniprot:Q5T653
Length = 305
Score = 129 (50.5 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 50/188 (26%), Positives = 83/188 (44%)
Query: 28 RFRSLDF------GERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEG 81
R+R +DF ++G + + ++ +DP R A +A V +K +A E
Sbjct: 103 RYRMIDFLRFRPEETKSGPFEEKVIQVRYDPCRSADIALVAGGS------RKRWIIATEN 156
Query: 82 MYTGQFV----YCGRKATLV-VGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVV 136
M G + + GR A G+ PL ++P G ++ NVE G + R +G V+
Sbjct: 157 MQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVL 216
Query: 137 ISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAG-NAYHKFRVKRNC 195
+ N T I+LPS + V C A +G+V+ ++ + KAG N + R
Sbjct: 217 L--RKVNGTAIIQLPSKRQMQVLETCVATVGRVSNVDHNKRVIGKAGRNRWLGKRPNSGR 274
Query: 196 WPKVRGVA 203
W + G A
Sbjct: 275 WHRKGGWA 282
>UNIPROTKB|F1RRN2 [details] [associations]
symbol:MRPL2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR002171 InterPro:IPR022666 InterPro:IPR022669
Pfam:PF00181 Pfam:PF03947 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 Gene3D:4.10.950.10 InterPro:IPR014726
PANTHER:PTHR13691 CTD:51069 GeneTree:ENSGT00390000000189
OMA:GNRPRSG EMBL:CR956433 RefSeq:NP_001171996.1 UniGene:Ssc.21783
Ensembl:ENSSSCT00000001849 GeneID:100151914 KEGG:ssc:100151914
Uniprot:F1RRN2
Length = 306
Score = 129 (50.5 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 50/182 (27%), Positives = 80/182 (43%)
Query: 28 RFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQF 87
RFR + + G + + + +DP R A +A V + +K +A E M G
Sbjct: 111 RFRP-EHESKPGPFEEKVIAVRYDPCRSADIALVAGGN------RKRWIIATENMKAGDT 163
Query: 88 V----YCGRKATLV-VGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPD 142
V + GR A G+ PL ++P G ++ NVE G + R +G V++
Sbjct: 164 VLNSDHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL--RKV 221
Query: 143 NDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAG-NAYHKFRVKRNCWPKVRG 201
N T I+LPS + V C A +G+V+ ++ + KAG N + R W + G
Sbjct: 222 NGTAIIQLPSKRQMQVLETCIATVGRVSNVDHNKRVIGKAGRNRWLGKRPNSGLWQRKGG 281
Query: 202 VA 203
A
Sbjct: 282 WA 283
>MGI|MGI:1351622 [details] [associations]
symbol:Mrpl2 "mitochondrial ribosomal protein L2"
species:10090 "Mus musculus" [GO:0003735 "structural constituent of
ribosome" evidence=ISA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005762
"mitochondrial large ribosomal subunit" evidence=ISA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=ISA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR002171 InterPro:IPR022666 InterPro:IPR022669
Pfam:PF00181 Pfam:PF03947 MGI:MGI:1351622 GO:GO:0006412
GO:GO:0005762 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
InterPro:IPR014726 PANTHER:PTHR13691 eggNOG:COG0090 CTD:51069
GeneTree:ENSGT00390000000189 HOGENOM:HOG000046229
HOVERGEN:HBG057412 OMA:GNRPRSG OrthoDB:EOG4H19WF HSSP:P04257
EMBL:AK009521 EMBL:BC027762 IPI:IPI00109740 RefSeq:NP_079578.1
UniGene:Mm.391007 ProteinModelPortal:Q9D773 SMR:Q9D773
STRING:Q9D773 PhosphoSite:Q9D773 PaxDb:Q9D773 PRIDE:Q9D773
Ensembl:ENSMUST00000002844 GeneID:27398 KEGG:mmu:27398
InParanoid:Q9D773 NextBio:305380 Bgee:Q9D773 CleanEx:MM_MRPL2
Genevestigator:Q9D773 GermOnline:ENSMUSG00000002767 Uniprot:Q9D773
Length = 306
Score = 127 (49.8 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 45/165 (27%), Positives = 72/165 (43%)
Query: 45 ITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFV----YCGRKATLVV-G 99
+ + +DP R A +A V +K +A E M G + + GR A G
Sbjct: 127 VVVVRYDPCRSADIALVAGGS------RKRWIIATENMKAGDTILNSNHIGRMAVAAQEG 180
Query: 100 NVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVP 159
+ PL ++P G ++ NVE G + R +G V++ N T I+LPS + V
Sbjct: 181 DAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL--RKVNGTAIIQLPSKRQMQVL 238
Query: 160 SGCRAMIGQVAGGGRTEKPLLKAG-NAYHKFRVKRNCWPKVRGVA 203
C A +G+V+ ++ + KAG N + R W + G A
Sbjct: 239 ESCTATVGRVSNVNHNQRVIGKAGRNRWLGKRPNSGLWQRKGGWA 283
>UNIPROTKB|Q2TA12 [details] [associations]
symbol:MRPL2 "39S ribosomal protein L2, mitochondrial"
species:9913 "Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 Pfam:PF00181 Pfam:PF03947 GO:GO:0005739
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
eggNOG:COG0090 PDB:2FTC PDBsum:2FTC EMBL:BC111173 IPI:IPI00760520
RefSeq:NP_001035617.2 UniGene:Bt.9362 ProteinModelPortal:Q2TA12
STRING:Q2TA12 PRIDE:Q2TA12 Ensembl:ENSBTAT00000016951 GeneID:514403
KEGG:bta:514403 CTD:51069 GeneTree:ENSGT00390000000189
HOGENOM:HOG000046229 HOVERGEN:HBG057412 InParanoid:Q2TA12
OMA:GNRPRSG OrthoDB:EOG4H19WF EvolutionaryTrace:Q2TA12
NextBio:20871316 Uniprot:Q2TA12
Length = 306
Score = 125 (49.1 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 50/182 (27%), Positives = 80/182 (43%)
Query: 28 RFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQF 87
RFR + + + VI + +DP R A +A V + +K +A E M G
Sbjct: 111 RFRPEQESKPGPFEEKVIV-VRYDPCRSADIALVAGGN------RKRWIIATENMKAGDT 163
Query: 88 V----YCGRKATLV-VGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPD 142
+ + GR A G+ PL ++P G ++ NVE G + R +G V++
Sbjct: 164 ILNSDHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL--RKV 221
Query: 143 NDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAG-NAYHKFRVKRNCWPKVRG 201
N T I+LPS + V C A +G+V+ ++ + KAG N + R W + G
Sbjct: 222 NGTAIIQLPSKRQMQVLETCTATVGRVSNVDHNKRVIGKAGRNRWLGKRPNSGRWHRKGG 281
Query: 202 VA 203
A
Sbjct: 282 WA 283
>ZFIN|ZDB-GENE-050809-12 [details] [associations]
symbol:im:6908224 "im:6908224" species:7955 "Danio
rerio" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR002171 InterPro:IPR022666 InterPro:IPR022669
Pfam:PF00181 Pfam:PF03947 ZFIN:ZDB-GENE-050809-12 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR13691
GeneTree:ENSGT00390000000189 EMBL:CABZ01079772 IPI:IPI00992922
Ensembl:ENSDART00000090644 Bgee:E7F8R3 Uniprot:E7F8R3
Length = 294
Score = 122 (48.0 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 53/204 (25%), Positives = 89/204 (43%)
Query: 6 RAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRH 65
R + G G K H R RS + G+ + + E+ +DP R A +A V +
Sbjct: 78 RIKTHGIGGGHKQR-HRIIDFQRLRS-EPGKEQPVMVEKVLEVRYDPCRSADIALVAGGN 135
Query: 66 PFRYQHQKELFVAAEGMYTGQFVY-C---GRKATLVV-GNVLPLRSIPEGAVVCNVEHHV 120
+K +A++ M G + C GR A L G+ P+ ++P G ++ N+E
Sbjct: 136 ------RKRWIIASQNMEAGDLIQSCRGIGRMAVLAQEGDAHPVGALPVGTLIHNLELFP 189
Query: 121 GDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
G + R +G V++ + T I+LPS + V C A +G+V+ ++ +
Sbjct: 190 GRGAQYIRAAGTCGVLL--RKVSGTAIIQLPSKHQIQVLETCVATVGRVSNVDHNKRIIG 247
Query: 181 KAG-NAYHKFRVKRNCWPKVRGVA 203
KAG N + R W + G A
Sbjct: 248 KAGTNRWLGIRPSSGRWQRKGGWA 271
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.140 0.441 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 260 238 0.00091 113 3 11 22 0.40 33
32 0.44 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 81
No. of states in DFA: 600 (64 KB)
Total size of DFA: 186 KB (2106 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.36u 0.18s 19.54t Elapsed: 00:00:01
Total cpu time: 19.37u 0.18s 19.55t Elapsed: 00:00:01
Start: Sat May 11 08:52:05 2013 End: Sat May 11 08:52:06 2013