BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024947
(260 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P29766|RL8_SOLLC 60S ribosomal protein L8 OS=Solanum lycopersicum GN=RPL8 PE=2 SV=1
Length = 260
Score = 512 bits (1319), Expect = e-145, Method: Compositional matrix adjust.
Identities = 248/260 (95%), Positives = 257/260 (98%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 60
MGRVIRAQRKGAGSVFKSHTHHRKGPARFR+LDFGERNGYLKGVITE+IHDPGRGAPLAR
Sbjct: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRTLDFGERNGYLKGVITEVIHDPGRGAPLAR 60
Query: 61 VTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
VTFRHPFRY+HQKELFVAAEGMYTGQFVYCG+KATL+VGNVLPLRSIPEGAVVCNVEH V
Sbjct: 61 VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKATLMVGNVLPLRSIPEGAVVCNVEHKV 120
Query: 121 GDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
GDRGVFARCSGDYA+VISHNPDN TTR+KLPSGAKKIVPSGCRAMIGQVAGGGRTEKP+L
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNGTTRVKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPML 180
Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
KAGNAYHK+RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
Query: 241 RRTGRLRGQAAATAAKADKA 260
RRTGRLRGQA ATAAKADKA
Sbjct: 241 RRTGRLRGQARATAAKADKA 260
>sp|Q42064|RL83_ARATH 60S ribosomal protein L8-3 OS=Arabidopsis thaliana GN=RPL8C PE=1
SV=2
Length = 258
Score = 501 bits (1289), Expect = e-141, Method: Compositional matrix adjust.
Identities = 239/258 (92%), Positives = 254/258 (98%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 60
MGRVIRAQRKGAGSVFKSHTHHRKGPA+FRSLDFGERNGYLKGV+TEIIHDPGRGAPLAR
Sbjct: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60
Query: 61 VTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
V FRHPFR++ QKELFVAAEGMYTGQF+YCG+KATLVVGNVLPLRSIPEGAV+CNVEHHV
Sbjct: 61 VAFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVICNVEHHV 120
Query: 121 GDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
GDRGVFAR SGDYA+VI+HNPDNDT+RIKLPSG+KKIVPSGCRAMIGQVAGGGRTEKP+L
Sbjct: 121 GDRGVFARASGDYAIVIAHNPDNDTSRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPML 180
Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
KAGNAYHK+RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPG+KVGLIAA
Sbjct: 181 KAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGKKVGLIAA 240
Query: 241 RRTGRLRGQAAATAAKAD 258
RRTGRLRGQAAA A+KAD
Sbjct: 241 RRTGRLRGQAAALASKAD 258
>sp|P46286|RL81_ARATH 60S ribosomal protein L8-1 OS=Arabidopsis thaliana GN=RPL8A PE=1
SV=2
Length = 258
Score = 487 bits (1254), Expect = e-137, Method: Compositional matrix adjust.
Identities = 241/258 (93%), Positives = 254/258 (98%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 60
MGRVIRAQRKGAGSVFKSHTHHRKGPA+FRSLDFGERNGYLKGV+TEIIHDPGRGAPLAR
Sbjct: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60
Query: 61 VTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
VTFRHPFR++ QKELFVAAEGMYTGQF+YCG+KATLVVGNVLPLRSIPEGAVVCNVEHHV
Sbjct: 61 VTFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
Query: 121 GDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
GDRGV AR SGDYA+VI+HNPD+DTTRIKLPSG+KKIVPSGCRAMIGQVAGGGRTEKP+L
Sbjct: 121 GDRGVLARASGDYAIVIAHNPDSDTTRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPML 180
Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
KAGNAYHK+RVKRN WPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKYRVKRNSWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
Query: 241 RRTGRLRGQAAATAAKAD 258
RRTGRLRGQAAA+AAKAD
Sbjct: 241 RRTGRLRGQAAASAAKAD 258
>sp|P25998|RL8_TOBAC 60S ribosomal protein L8 OS=Nicotiana tabacum GN=RPL8 PE=2 SV=1
Length = 260
Score = 483 bits (1244), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/249 (93%), Positives = 242/249 (97%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 60
MGR+IRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITE+IHDPGRGAPLAR
Sbjct: 1 MGRLIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEVIHDPGRGAPLAR 60
Query: 61 VTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
VTFR+PFRY HQKELFVAAEGMYTGQFVYCG+KATL+VGNVLPLRSIPEGAVVCNVEH V
Sbjct: 61 VTFRYPFRYNHQKELFVAAEGMYTGQFVYCGKKATLMVGNVLPLRSIPEGAVVCNVEHKV 120
Query: 121 GDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
GDRGVFARCSG YA+VISHNPDN TTRIKLPSG+KKIVPSGCR MIGQVAGGGRTEKP+L
Sbjct: 121 GDRGVFARCSGAYAIVISHNPDNGTTRIKLPSGSKKIVPSGCRRMIGQVAGGGRTEKPML 180
Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
KAGNAYHK+RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTV RDAPPGQKVGLIA
Sbjct: 181 KAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVARDAPPGQKVGLIAG 240
Query: 241 RRTGRLRGQ 249
RRTGRLRGQ
Sbjct: 241 RRTGRLRGQ 249
>sp|Q4PSL7|RL82_ARATH 60S ribosomal protein L8-2 OS=Arabidopsis thaliana GN=RPL8B PE=2
SV=3
Length = 260
Score = 426 bits (1096), Expect = e-119, Method: Compositional matrix adjust.
Identities = 202/239 (84%), Positives = 221/239 (92%), Gaps = 1/239 (0%)
Query: 1 MGRVIRAQRKGA-GSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLA 59
MGRVIRAQRKGA GSVFKSHTHHRKGPA+FRSLD+GERNGYLKG++TEIIHDPGRGAPLA
Sbjct: 1 MGRVIRAQRKGAAGSVFKSHTHHRKGPAKFRSLDYGERNGYLKGLVTEIIHDPGRGAPLA 60
Query: 60 RVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHH 119
RV FRHPFRY QKELFVAAEGMYTGQ++YCG+KA L+VGNVLPL SIPEGAV+CNVE H
Sbjct: 61 RVAFRHPFRYMKQKELFVAAEGMYTGQYLYCGKKANLMVGNVLPLGSIPEGAVICNVELH 120
Query: 120 VGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPL 179
VGDRG AR SGDYA+VI+HNP+++TTR+KLPSG+KKI+PS CRAMIGQVAGGGRTEKPL
Sbjct: 121 VGDRGALARASGDYAIVIAHNPESNTTRVKLPSGSKKILPSACRAMIGQVAGGGRTEKPL 180
Query: 180 LKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 238
LKAGNAYHK++ KRNCWP VRGVAMNPVEHPHGGGNHQHIGHASTVRRD G KVG I
Sbjct: 181 LKAGNAYHKYKAKRNCWPVVRGVAMNPVEHPHGGGNHQHIGHASTVRRDKSAGAKVGQI 239
>sp|Q9U9L2|RL8_ANOGA 60S ribosomal protein L8 OS=Anopheles gambiae GN=RpL8 PE=2 SV=2
Length = 261
Score = 386 bits (991), Expect = e-107, Method: Compositional matrix adjust.
Identities = 182/248 (73%), Positives = 212/248 (85%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 60
MGRVIRAQRKGAGSVF++HT RKG + R LD+ ER+GYLKGV+ +IIHDPGRGAPLA
Sbjct: 1 MGRVIRAQRKGAGSVFRAHTKKRKGEPKLRHLDYAERHGYLKGVVKQIIHDPGRGAPLAV 60
Query: 61 VTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
V FR P+R++ K+LF+AAEGMYTGQFVYCGR+A L +GNVLP+ +PEG +VCN+E
Sbjct: 61 VNFRDPYRFRLSKQLFIAAEGMYTGQFVYCGRRAQLQIGNVLPIGLMPEGTIVCNLEEKT 120
Query: 121 GDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
GDRG AR SG+YA VI+HNPD TR+KLPSGAKK++PS RAMIG VAGGGR +KP+L
Sbjct: 121 GDRGKLARTSGNYASVIAHNPDTKRTRVKLPSGAKKVLPSANRAMIGIVAGGGRIDKPIL 180
Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
KAG AYHK++VKRNCWPKVRGVAMNPVEHPHGGGNHQHIG ASTV+R PPG+KVGLIAA
Sbjct: 181 KAGRAYHKYKVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTPPGRKVGLIAA 240
Query: 241 RRTGRLRG 248
RRTGR+RG
Sbjct: 241 RRTGRIRG 248
>sp|Q9V3G1|RL8_DROME 60S ribosomal protein L8 OS=Drosophila melanogaster GN=RpL8 PE=2
SV=1
Length = 256
Score = 383 bits (983), Expect = e-106, Method: Compositional matrix adjust.
Identities = 180/248 (72%), Positives = 210/248 (84%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 60
MGRVIRAQRKGAGSVFK+H RKG A+ RSLDF ER+GY++GV+ +IIHDPGRGAPLA
Sbjct: 1 MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAV 60
Query: 61 VTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
V FR P+RY+ +KELF+A EGM+TGQFVYCGRKATL +GNV+PL +PEG ++CN+E
Sbjct: 61 VHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKT 120
Query: 121 GDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
GDRG AR SG+YA VI+HN D TR+KLPSGAKK+VPS RAM+G VAGGGR +KP+L
Sbjct: 121 GDRGRLARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIVAGGGRIDKPIL 180
Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
KAG AYHK++VKRN WPKVRGVAMNPVEHPHGGGNHQHIG ASTV+R G+KVGLIAA
Sbjct: 181 KAGRAYHKYKVKRNSWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 240
Query: 241 RRTGRLRG 248
RRTGR+RG
Sbjct: 241 RRTGRIRG 248
>sp|P41116|RL8_XENLA 60S ribosomal protein L8 OS=Xenopus laevis GN=rpl8 PE=2 SV=3
Length = 257
Score = 378 bits (970), Expect = e-104, Method: Compositional matrix adjust.
Identities = 175/248 (70%), Positives = 211/248 (85%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 60
MGRVIR QRKGAGSVFK+H HRKG A+ R++DF ERNGY+KG++ +IIHDPGRGAPLA+
Sbjct: 1 MGRVIRGQRKGAGSVFKAHVKHRKGAAKLRAIDFAERNGYIKGIVKDIIHDPGRGAPLAK 60
Query: 61 VTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
V FR P+R++ + ELFVAAEG++TGQFVYCG+KA L +GNVLP+ ++PEG +VC VE
Sbjct: 61 VAFRDPYRFKKRTELFVAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCVEEKP 120
Query: 121 GDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
GDRG AR SG+YA VISHNP+ TR+KLPSG+KK++ S RA++G VAGGGR +KP+L
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAIVGVVAGGGRIDKPIL 180
Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
KAG AYHK++ KRNCWP+VRGVAMNPVEHP GGGNHQHIG ST+RRDAP G+KVGLIAA
Sbjct: 181 KAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAA 240
Query: 241 RRTGRLRG 248
RRTGRLRG
Sbjct: 241 RRTGRLRG 248
>sp|P41569|RL8_AEDAL 60S ribosomal protein L8 OS=Aedes albopictus GN=RpL8 PE=3 SV=1
Length = 261
Score = 376 bits (966), Expect = e-104, Method: Compositional matrix adjust.
Identities = 176/248 (70%), Positives = 209/248 (84%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 60
MGRVIRAQRKG GSVF +HT RKG + R+LD+ ER+GYLKG + +IIHDPGRGAPLA
Sbjct: 1 MGRVIRAQRKGEGSVFTAHTKKRKGEPKLRALDYAERHGYLKGTVKQIIHDPGRGAPLAV 60
Query: 61 VTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
V FR P+++ +K+LF+AAEGMYTGQFVYCG++A L +GNVLP+ +PEG +VCN+E
Sbjct: 61 VHFRDPYKFNVRKQLFIAAEGMYTGQFVYCGKRAQLQIGNVLPIGLMPEGTIVCNLEEKT 120
Query: 121 GDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
GDRG AR SG+YA VI+HNPD TR+KLPSGAKK++PS RAM+G VAGGGR +KP+L
Sbjct: 121 GDRGKLARTSGNYASVIAHNPDTKRTRVKLPSGAKKVLPSANRAMVGIVAGGGRIDKPIL 180
Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
KAG AY K++VKRNCWPKVRGVAMNPVEHPHGGGNHQHIG ASTV+R PPG+KVGLIAA
Sbjct: 181 KAGRAYRKYKVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTPPGRKVGLIAA 240
Query: 241 RRTGRLRG 248
RRTGR+RG
Sbjct: 241 RRTGRIRG 248
>sp|Q6PBF0|RL8_XENTR 60S ribosomal protein L8 OS=Xenopus tropicalis GN=rpl8 PE=2 SV=3
Length = 257
Score = 375 bits (962), Expect = e-103, Method: Compositional matrix adjust.
Identities = 174/248 (70%), Positives = 211/248 (85%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 60
MGRVIR QRKGAGSVFK+H HRKG A+ R++DF ER+GY+KG++ +IIHDPGRGAPLA+
Sbjct: 1 MGRVIRGQRKGAGSVFKAHVKHRKGAAKLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 61 VTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
V FR P+R++ + ELFVAAEG++TGQFVYCG+KA L +GNVLP+ ++PEG +VC VE
Sbjct: 61 VAFRDPYRFKKRTELFVAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCVEEKP 120
Query: 121 GDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
GDRG AR SG+YA VISHNP+ TR+KLPSG+KK++ S RA++G VAGGGR +KP+L
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAIVGVVAGGGRIDKPIL 180
Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
KAG AYHK++ KRNCWP+VRGVAMNPVEHP GGGNHQHIG ST+RRDAP G+KVGLIAA
Sbjct: 181 KAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAA 240
Query: 241 RRTGRLRG 248
RRTGRLRG
Sbjct: 241 RRTGRLRG 248
>sp|Q95V39|RL8_SPOFR 60S ribosomal protein L8 OS=Spodoptera frugiperda GN=RpL8 PE=2 SV=1
Length = 257
Score = 374 bits (961), Expect = e-103, Method: Compositional matrix adjust.
Identities = 177/253 (69%), Positives = 211/253 (83%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 60
MGRVIRAQRKGAGSVF SHT RKG + RSLD+ ER+GY+KGV+ +IIHDPGRGAPLA
Sbjct: 1 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 60
Query: 61 VTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
V FR P++++ +KELF+A EG+YTGQFVYCG+KATL VGNV+P+ ++PEG +VCN+E +
Sbjct: 61 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 120
Query: 121 GDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
GDRG AR SG++A VI HNPD TR+KLPSGAKK++PS R M+G VAGGGR +KP+L
Sbjct: 121 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 180
Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
KAG AYHK++VKRNCWP VRGVAMNPVEHPHGGGNHQHIG ASTV+R G+KVGLIAA
Sbjct: 181 KAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 240
Query: 241 RRTGRLRGQAAAT 253
RRTGR+RG T
Sbjct: 241 RRTGRIRGGKTDT 253
>sp|Q6RYS3|RL8_MAMBR 60S ribosomal protein L8 OS=Mamestra brassicae GN=RpL8 PE=2 SV=1
Length = 257
Score = 374 bits (961), Expect = e-103, Method: Compositional matrix adjust.
Identities = 177/253 (69%), Positives = 211/253 (83%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 60
MGRVIRAQRKGAGSVF SHT RKG + RSLD+ ER+GY+KGV+ +IIHDPGRGAPLA
Sbjct: 1 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 60
Query: 61 VTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
V FR P++++ +KELF+A EG+YTGQFVYCG+KATL VGNV+P+ ++PEG +VCN+E +
Sbjct: 61 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 120
Query: 121 GDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
GDRG AR SG++A VI HNPD TR+KLPSGAKK++PS R M+G VAGGGR +KP+L
Sbjct: 121 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 180
Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
KAG AYHK++VKRNCWP VRGVAMNPVEHPHGGGNHQHIG ASTV+R G+KVGLIAA
Sbjct: 181 KAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 240
Query: 241 RRTGRLRGQAAAT 253
RRTGR+RG T
Sbjct: 241 RRTGRIRGGKTDT 253
>sp|P13023|RL8_DICDI 60S ribosomal protein L8 OS=Dictyostelium discoideum GN=rpl8 PE=1
SV=2
Length = 255
Score = 372 bits (954), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/249 (70%), Positives = 210/249 (84%), Gaps = 1/249 (0%)
Query: 1 MGRVIRAQRKG-AGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLA 59
MGR+IRAQRKG AGSVF +HTHHRKG RFR+LD+ ER GY+KGV+ EIIHDPGRGAPLA
Sbjct: 1 MGRIIRAQRKGKAGSVFGAHTHHRKGTPRFRALDYAERQGYVKGVVKEIIHDPGRGAPLA 60
Query: 60 RVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHH 119
RV F+ +++ K+LF+A EGM+TGQFV+ G+KATL +GN+LP+ +PEG ++CNVE
Sbjct: 61 RVVFKGLTQFKLDKQLFIAPEGMHTGQFVFAGKKATLTIGNILPIGKLPEGTIICNVEEK 120
Query: 120 VGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPL 179
+GD G ARCSG+YA ++SHNPD TRIKLPSG+KK V S RAMIG VAGGGR +KP+
Sbjct: 121 LGDCGAVARCSGNYATIVSHNPDEGVTRIKLPSGSKKNVSSLARAMIGIVAGGGRIDKPM 180
Query: 180 LKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIA 239
LKAG A+HK+RVK+N WPKVRGVAMNPVEHPHGGGNHQH+GHA+T +RD P G+KVGLIA
Sbjct: 181 LKAGRAFHKYRVKKNNWPKVRGVAMNPVEHPHGGGNHQHVGHATTTKRDDPAGKKVGLIA 240
Query: 240 ARRTGRLRG 248
ARRTGRLRG
Sbjct: 241 ARRTGRLRG 249
>sp|Q9XVF7|RL8_CAEEL 60S ribosomal protein L8 OS=Caenorhabditis elegans GN=rpl-8 PE=1
SV=1
Length = 260
Score = 364 bits (935), Expect = e-100, Method: Compositional matrix adjust.
Identities = 170/248 (68%), Positives = 206/248 (83%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 60
MGR IR QRKGAG +FKSH HRKG ++ R LD+ ER+GY+KG++ +IIHDPGRGAPLA
Sbjct: 1 MGRRIRIQRKGAGGIFKSHNKHRKGASKLRPLDYAERHGYIKGLVKDIIHDPGRGAPLAI 60
Query: 61 VTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
+ FR P++Y+ K VAAEGM+TGQF++CG KA + +GN++P+ ++PEG +CNVE+
Sbjct: 61 IAFRDPYKYKTVKTTVVAAEGMHTGQFIHCGAKAQIQIGNIVPVGTLPEGTTICNVENKS 120
Query: 121 GDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
GDRGV AR SG+YA VI+HNPD TRI+LPSGAKK+V S RAMIG VAGGGRT+KPLL
Sbjct: 121 GDRGVIARASGNYATVIAHNPDTKKTRIRLPSGAKKVVQSVNRAMIGLVAGGGRTDKPLL 180
Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
KAG +YHK++ KRN WP+VRGVAMNPVEHPHGGGNHQHIGH STVRRDA G+KVGLIAA
Sbjct: 181 KAGRSYHKYKAKRNSWPRVRGVAMNPVEHPHGGGNHQHIGHPSTVRRDASAGKKVGLIAA 240
Query: 241 RRTGRLRG 248
RRTGR+RG
Sbjct: 241 RRTGRIRG 248
>sp|P62919|RL8_RAT 60S ribosomal protein L8 OS=Rattus norvegicus GN=Rpl8 PE=2 SV=2
Length = 257
Score = 356 bits (914), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 172/248 (69%), Positives = 211/248 (85%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 60
MGRVIR QRKGAGSVF++H HRKG AR R++DF ER+GY+KG++ +IIHDPGRGAPLA+
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 61 VTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
V FR P+R++ + ELF+AAEG++TGQFVYCG+KA L +GNVLP+ ++PEG +VC +E
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 121 GDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
GDRG AR SG+YA VISHNP+ TR+KLPSG+KK++ S RA++G VAGGGR +KP+L
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPIL 180
Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
KAG AYHK++ KRNCWP+VRGVAMNPVEHP GGGNHQHIG ST+RRDAP G+KVGLIAA
Sbjct: 181 KAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAA 240
Query: 241 RRTGRLRG 248
RRTGRLRG
Sbjct: 241 RRTGRLRG 248
>sp|P62918|RL8_MOUSE 60S ribosomal protein L8 OS=Mus musculus GN=Rpl8 PE=2 SV=2
Length = 257
Score = 356 bits (914), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 172/248 (69%), Positives = 211/248 (85%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 60
MGRVIR QRKGAGSVF++H HRKG AR R++DF ER+GY+KG++ +IIHDPGRGAPLA+
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 61 VTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
V FR P+R++ + ELF+AAEG++TGQFVYCG+KA L +GNVLP+ ++PEG +VC +E
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 121 GDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
GDRG AR SG+YA VISHNP+ TR+KLPSG+KK++ S RA++G VAGGGR +KP+L
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPIL 180
Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
KAG AYHK++ KRNCWP+VRGVAMNPVEHP GGGNHQHIG ST+RRDAP G+KVGLIAA
Sbjct: 181 KAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAA 240
Query: 241 RRTGRLRG 248
RRTGRLRG
Sbjct: 241 RRTGRLRG 248
>sp|P62917|RL8_HUMAN 60S ribosomal protein L8 OS=Homo sapiens GN=RPL8 PE=1 SV=2
Length = 257
Score = 356 bits (914), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 172/248 (69%), Positives = 211/248 (85%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 60
MGRVIR QRKGAGSVF++H HRKG AR R++DF ER+GY+KG++ +IIHDPGRGAPLA+
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 61 VTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
V FR P+R++ + ELF+AAEG++TGQFVYCG+KA L +GNVLP+ ++PEG +VC +E
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 121 GDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
GDRG AR SG+YA VISHNP+ TR+KLPSG+KK++ S RA++G VAGGGR +KP+L
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPIL 180
Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
KAG AYHK++ KRNCWP+VRGVAMNPVEHP GGGNHQHIG ST+RRDAP G+KVGLIAA
Sbjct: 181 KAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAA 240
Query: 241 RRTGRLRG 248
RRTGRLRG
Sbjct: 241 RRTGRLRG 248
>sp|Q3T0S6|RL8_BOVIN 60S ribosomal protein L8 OS=Bos taurus GN=RPL8 PE=2 SV=3
Length = 257
Score = 356 bits (914), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 172/248 (69%), Positives = 211/248 (85%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 60
MGRVIR QRKGAGSVF++H HRKG AR R++DF ER+GY+KG++ +IIHDPGRGAPLA+
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 61 VTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
V FR P+R++ + ELF+AAEG++TGQFVYCG+KA L +GNVLP+ ++PEG +VC +E
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 121 GDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
GDRG AR SG+YA VISHNP+ TR+KLPSG+KK++ S RA++G VAGGGR +KP+L
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPIL 180
Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
KAG AYHK++ KRNCWP+VRGVAMNPVEHP GGGNHQHIG ST+RRDAP G+KVGLIAA
Sbjct: 181 KAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAA 240
Query: 241 RRTGRLRG 248
RRTGRLRG
Sbjct: 241 RRTGRLRG 248
>sp|Q5R7Y8|RL8_PONAB 60S ribosomal protein L8 OS=Pongo abelii GN=RPL8 PE=2 SV=3
Length = 257
Score = 354 bits (909), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 171/248 (68%), Positives = 210/248 (84%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 60
MGRVIR QRKGAGSVF++H HRKG AR R++DF ER+GY+KG++ +IIHDPGRGAPLA+
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 61 VTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
V FR P+R++ + ELF+AAEG++TGQFVYCG+KA L +GNVLP+ ++PEG +VC +E
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 121 GDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
GDRG AR SG+YA VISHNP+ TR+KLPSG+KK++ S RA++G VAGGGR +KP+L
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPIL 180
Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
KAG AYHK++ KRNCWP+VRGVAMNPVEHP GGGNHQHIG ST+RRDAP G+KVGLIA
Sbjct: 181 KAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAV 240
Query: 241 RRTGRLRG 248
RRTGRLRG
Sbjct: 241 RRTGRLRG 248
>sp|Q6P0V6|RL8_DANRE 60S ribosomal protein L8 OS=Danio rerio GN=rpl8 PE=2 SV=3
Length = 257
Score = 353 bits (907), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 170/248 (68%), Positives = 210/248 (84%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 60
MGRVIR QRKGAGSVFK+H HRKG A+ R +DF ER+GY+KG++ +IIHDPGRGAPLA+
Sbjct: 1 MGRVIRGQRKGAGSVFKAHVKHRKGAAKLRHIDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 61 VTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
V FR P+R++ + ELF+AAEG++TGQF+YCG+KA L +GNVLP+ ++PEG +VC +E
Sbjct: 61 VMFRDPYRFKKRTELFIAAEGIHTGQFIYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 121 GDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
GDRG AR SG+YA VISHNP+ +R+KLPSG+KK++ S RA++G VAGGGR +KP+L
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKSRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPIL 180
Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
KAG AYHK++ KRNCWP+VRGVAMNPVEHP GGGNHQHIG ST+RRDAP G+KVGLIAA
Sbjct: 181 KAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAA 240
Query: 241 RRTGRLRG 248
RRTGRLRG
Sbjct: 241 RRTGRLRG 248
>sp|Q90YW1|RL8_ICTPU 60S ribosomal protein L8 OS=Ictalurus punctatus GN=rpl8 PE=2 SV=3
Length = 257
Score = 352 bits (902), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 170/248 (68%), Positives = 209/248 (84%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 60
MGRVIRAQRKGAGSVFK+H HRKG A+ R +DF ER+GY+KG++ +IIHDPGRG PLA+
Sbjct: 1 MGRVIRAQRKGAGSVFKAHVKHRKGAAKLRHIDFAERHGYIKGIVKDIIHDPGRGTPLAK 60
Query: 61 VTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
V FR P+R++ + ELF+AAEG++TGQFV+CG+KA L +GNVLP+ +PEG ++C +E
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVFCGKKAQLNIGNVLPVGVMPEGTIICCLEEKP 120
Query: 121 GDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
GDRG AR SG+YA VISHNP+ +R+KLPSGAKK++ S RA++G VAGGGR +KP+L
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKSRVKLPSGAKKVISSTNRAVVGVVAGGGRIDKPIL 180
Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
KAG AYHK++VKRNCWP+VRGVAMNPVEHP GGGNHQHIG ST+RRD P G+KVGLIAA
Sbjct: 181 KAGRAYHKYKVKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDVPAGRKVGLIAA 240
Query: 241 RRTGRLRG 248
RRTGRLRG
Sbjct: 241 RRTGRLRG 248
>sp|P08093|RL2_SCHPO 60S ribosomal protein L2 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=rpl2a PE=3 SV=2
Length = 253
Score = 343 bits (879), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 166/251 (66%), Positives = 204/251 (81%), Gaps = 1/251 (0%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 60
MGRVIRAQRK +G +F++HT RKG A+ R+LDF ER+GY++GV+ +IIHDPGRGAPLA+
Sbjct: 1 MGRVIRAQRK-SGGIFQAHTRLRKGAAQLRTLDFAERHGYIRGVVQKIIHDPGRGAPLAK 59
Query: 61 VTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
V FR+P+ Y+ E FVA EGMYTGQFVYCG+ A L VGNVLP+ +PEG ++ NVE
Sbjct: 60 VAFRNPYHYRTDVETFVATEGMYTGQFVYCGKNAALTVGNVLPVGEMPEGTIISNVEEKA 119
Query: 121 GDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
GDRG R SG+Y +++ H+ D TR+KLPSGAKK+VPS R ++G VAGGGR +KPLL
Sbjct: 120 GDRGALGRSSGNYVIIVGHDVDTGKTRVKLPSGAKKVVPSSARGVVGIVAGGGRIDKPLL 179
Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
KAG A+HK+RVKRNCWP+ RGVAMNPV+HPHGGGNHQH+GH++TV R + PGQKVGLIAA
Sbjct: 180 KAGRAFHKYRVKRNCWPRTRGVAMNPVDHPHGGGNHQHVGHSTTVPRQSAPGQKVGLIAA 239
Query: 241 RRTGRLRGQAA 251
RRTG LRG AA
Sbjct: 240 RRTGLLRGAAA 250
>sp|Q6FPN7|RL2_CANGA 60S ribosomal protein L2 OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=RPL2 PE=4
SV=1
Length = 254
Score = 342 bits (877), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 163/248 (65%), Positives = 205/248 (82%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 60
MGRVIR QRKGAGS+F SHT R+G A+ R+LD+ ER+GY++GV+ +I+HD GRGAPLA+
Sbjct: 1 MGRVIRNQRKGAGSIFTSHTRLRQGAAKLRTLDYAERHGYIRGVVKQIVHDAGRGAPLAK 60
Query: 61 VTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
V FR P++Y+ ++E+F+A EG++TGQF+Y G+KA+L VGNVLPL S+PEG +V NVE
Sbjct: 61 VVFRDPYKYKLREEIFIANEGVHTGQFIYAGKKASLNVGNVLPLGSVPEGTIVSNVEEKP 120
Query: 121 GDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
GDRG AR SG+Y ++I HNPD + TR++LPSGAKKI+ S R +IG +AGGGRT+KPLL
Sbjct: 121 GDRGALARASGNYVIIIGHNPDENKTRVRLPSGAKKIISSDARGVIGVIAGGGRTDKPLL 180
Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
KAG A+HK+++KRN WPK RGVAMNPV+HPHGGGNHQHIG AST+ R A GQK GLIAA
Sbjct: 181 KAGRAFHKYKLKRNSWPKTRGVAMNPVDHPHGGGNHQHIGKASTISRGAVSGQKAGLIAA 240
Query: 241 RRTGRLRG 248
RRTG LRG
Sbjct: 241 RRTGLLRG 248
>sp|P0DJ52|RL8_TETTS 60S ribosomal protein L8 OS=Tetrahymena thermophila (strain SB210)
GN=RPL8 PE=1 SV=1
Length = 264
Score = 341 bits (874), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 164/249 (65%), Positives = 195/249 (78%), Gaps = 1/249 (0%)
Query: 1 MGRVIRAQRKG-AGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLA 59
MGRVIRAQRKG A V+KSH R PA++R DF ER GY++G I +I+H+PGRGAPLA
Sbjct: 1 MGRVIRAQRKGRANGVYKSHKSGRIAPAQYRVYDFAERQGYIRGCIRDIVHEPGRGAPLA 60
Query: 60 RVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHH 119
V FR P+RY+ KE F+AAEG Y+GQ+VYCG KA + VGNVLP+ IPEG VVCNVE
Sbjct: 61 EVAFRDPYRYKTNKEHFIAAEGQYSGQYVYCGLKAQIAVGNVLPINRIPEGTVVCNVEEK 120
Query: 120 VGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPL 179
VGDRG F+R SG YA +I H+ D D TRI+LPSGA+K +P CRA +G VAGGGRT+KP+
Sbjct: 121 VGDRGTFSRASGCYATIIGHSEDGDKTRIRLPSGARKTIPGSCRATVGIVAGGGRTDKPI 180
Query: 180 LKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIA 239
LKAGN +HK+ KR WP+VRGVAMNPV+HPHGGGNHQHIGH +TV + A GQKVGL A
Sbjct: 181 LKAGNQFHKYARKRKSWPRVRGVAMNPVDHPHGGGNHQHIGHPATVSKWASAGQKVGLRA 240
Query: 240 ARRTGRLRG 248
ARRTG +RG
Sbjct: 241 ARRTGLVRG 249
>sp|P0CX46|RL2B_YEAST 60S ribosomal protein L2-B OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPL2B PE=1 SV=1
Length = 254
Score = 340 bits (871), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 161/248 (64%), Positives = 204/248 (82%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 60
MGRVIR QRKGAGS+F SHT R+G A+ R+LD+ ER+GY++G++ +I+HD GRGAPLA+
Sbjct: 1 MGRVIRNQRKGAGSIFTSHTRLRQGAAKLRTLDYAERHGYIRGIVKQIVHDSGRGAPLAK 60
Query: 61 VTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
V FR P++Y+ ++E+F+A EG++TGQF+Y G+KA+L VGNVLPL S+PEG +V NVE
Sbjct: 61 VVFRDPYKYRLREEIFIANEGVHTGQFIYAGKKASLNVGNVLPLGSVPEGTIVSNVEEKP 120
Query: 121 GDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
GDRG AR SG+Y ++I HNPD + TR++LPSGAKK++ S R +IG +AGGGR +KPLL
Sbjct: 121 GDRGALARASGNYVIIIGHNPDENKTRVRLPSGAKKVISSDARGVIGVIAGGGRVDKPLL 180
Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
KAG A+HK+R+KRN WPK RGVAMNPV+HPHGGGNHQHIG AST+ R A GQK GLIAA
Sbjct: 181 KAGRAFHKYRLKRNSWPKTRGVAMNPVDHPHGGGNHQHIGKASTISRGAVSGQKAGLIAA 240
Query: 241 RRTGRLRG 248
RRTG LRG
Sbjct: 241 RRTGLLRG 248
>sp|P0CX45|RL2A_YEAST 60S ribosomal protein L2-A OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPL2A PE=1 SV=1
Length = 254
Score = 340 bits (871), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 161/248 (64%), Positives = 204/248 (82%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 60
MGRVIR QRKGAGS+F SHT R+G A+ R+LD+ ER+GY++G++ +I+HD GRGAPLA+
Sbjct: 1 MGRVIRNQRKGAGSIFTSHTRLRQGAAKLRTLDYAERHGYIRGIVKQIVHDSGRGAPLAK 60
Query: 61 VTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
V FR P++Y+ ++E+F+A EG++TGQF+Y G+KA+L VGNVLPL S+PEG +V NVE
Sbjct: 61 VVFRDPYKYRLREEIFIANEGVHTGQFIYAGKKASLNVGNVLPLGSVPEGTIVSNVEEKP 120
Query: 121 GDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
GDRG AR SG+Y ++I HNPD + TR++LPSGAKK++ S R +IG +AGGGR +KPLL
Sbjct: 121 GDRGALARASGNYVIIIGHNPDENKTRVRLPSGAKKVISSDARGVIGVIAGGGRVDKPLL 180
Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
KAG A+HK+R+KRN WPK RGVAMNPV+HPHGGGNHQHIG AST+ R A GQK GLIAA
Sbjct: 181 KAGRAFHKYRLKRNSWPKTRGVAMNPVDHPHGGGNHQHIGKASTISRGAVSGQKAGLIAA 240
Query: 241 RRTGRLRG 248
RRTG LRG
Sbjct: 241 RRTGLLRG 248
>sp|Q75AP7|RL2_ASHGO 60S ribosomal protein L2 OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RPL2 PE=4 SV=1
Length = 254
Score = 339 bits (870), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 164/248 (66%), Positives = 202/248 (81%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 60
MGRVIR QRKGAGS+F SHT R+G A+ R+LD+ ER+GY++GV+ +I+HD GRGAPLA+
Sbjct: 1 MGRVIRNQRKGAGSIFTSHTRLRQGAAKLRTLDYAERHGYIRGVVKQIVHDAGRGAPLAK 60
Query: 61 VTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
V FR P++Y+ ++E F+A EG++TGQF+Y G+ A+L VGN+LPL S+PEG +V NVE
Sbjct: 61 VVFRDPYKYKLREETFIANEGVHTGQFIYAGKNASLNVGNILPLGSVPEGTIVSNVEERP 120
Query: 121 GDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
GDRG AR SG+Y +VI HNPD + TRI+LPSGAKKIV S R +IG +AGGGR +KPLL
Sbjct: 121 GDRGALARTSGNYVIVIGHNPDENKTRIRLPSGAKKIVSSDARGVIGVIAGGGRVDKPLL 180
Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
KAG A+HK++VKRN WPK RGVAMNPV+HPHGGGNHQHIG AST+ R A GQK GLIAA
Sbjct: 181 KAGRAFHKYKVKRNSWPKTRGVAMNPVDHPHGGGNHQHIGKASTISRGAVSGQKAGLIAA 240
Query: 241 RRTGRLRG 248
RRTG LRG
Sbjct: 241 RRTGLLRG 248
>sp|A3DNA7|RL2_STAMF 50S ribosomal protein L2P OS=Staphylothermus marinus (strain ATCC
43588 / DSM 3639 / F1) GN=rpl2p PE=3 SV=1
Length = 239
Score = 235 bits (599), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 126/249 (50%), Positives = 161/249 (64%), Gaps = 11/249 (4%)
Query: 1 MGRVIRAQRKGAGS-VFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLA 59
MG+ I QR G G+ F+S +H R GPA++ L + +KG I +++HDPGR PLA
Sbjct: 1 MGKRILPQRMGRGTPTFRSPSHRRVGPAKYPPLKL---DRTIKGKIIDLLHDPGRWVPLA 57
Query: 60 RVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHH 119
++ + L A EGMY GQ + G A + GN+LP+ IPEG + N+E
Sbjct: 58 KIVLEDGTTF-----LTPAVEGMYVGQIIEIGPDAHISNGNILPIGKIPEGTQIANIEKR 112
Query: 120 VGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPL 179
GD G F R SG YA+++ T+++LPSG VP+ RA IG +AGGGR EKPL
Sbjct: 113 PGDGGKFVRSSGTYALIVGRA--GTKTQVQLPSGKIIEVPNNARATIGVIAGGGRDEKPL 170
Query: 180 LKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIA 239
LKAGNAYHK++VK WPKVRGVAMN V HPHGGG+HQH+G STV R+ PPG+KVG IA
Sbjct: 171 LKAGNAYHKWKVKAKKWPKVRGVAMNAVSHPHGGGSHQHVGKPSTVARETPPGRKVGHIA 230
Query: 240 ARRTGRLRG 248
ARRTGR +G
Sbjct: 231 ARRTGRRKG 239
>sp|A4FVX9|RL2_METM5 50S ribosomal protein L2P OS=Methanococcus maripaludis (strain C5 /
ATCC BAA-1333) GN=rpl2p PE=3 SV=1
Length = 240
Score = 223 bits (568), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 121/246 (49%), Positives = 158/246 (64%), Gaps = 8/246 (3%)
Query: 1 MGRVIRAQRKGAGS-VFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLA 59
MG+ + +Q +G G+ ++S TH RKG ++RS D E++G + G + +I+HDPGR AP+A
Sbjct: 1 MGKRLISQNRGRGTPKYRSPTHKRKGAVKYRSYDEMEKDGKILGTVVDILHDPGRSAPVA 60
Query: 60 RVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHH 119
+V F + ++ L + EG+ G+ + CG A + GNVLPL IPEG V N+E
Sbjct: 61 KVRFAN-----DEERLVLIPEGIQVGEEIECGISAEIKPGNVLPLGEIPEGIPVYNIETI 115
Query: 120 VGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPL 179
GD G R G YA VISH D T +KLPSG K++ CRA +G VAGGGR EKP
Sbjct: 116 PGDGGKLVRSGGCYAHVISH--DVGKTIVKLPSGFSKVLNPACRATVGVVAGGGRKEKPF 173
Query: 180 LKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIA 239
+KAG YH K WPKVRGVAMN V+HP+GGG HQH+G S+V R PG+KVG IA
Sbjct: 174 VKAGKKYHSLSAKAVAWPKVRGVAMNAVDHPYGGGRHQHLGKPSSVSRHTSPGRKVGHIA 233
Query: 240 ARRTGR 245
+RRTGR
Sbjct: 234 SRRTGR 239
>sp|O26113|RL2_METTH 50S ribosomal protein L2P OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=rpl2p PE=3 SV=1
Length = 241
Score = 222 bits (566), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 123/248 (49%), Positives = 157/248 (63%), Gaps = 8/248 (3%)
Query: 1 MGRVIRAQRKGAGS-VFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLA 59
MG+ + +QR+G G+ ++S +H KG ++R+ D E G LKG + +I+HDPGR AP+A
Sbjct: 1 MGKRLISQRRGRGTPTYRSASHRFKGKIKYRAYDSIESEGSLKGKVVDIMHDPGRTAPVA 60
Query: 60 RVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHH 119
RV F + ++ L +A E + + V CG KA + GN LPL IPEG + N+E+
Sbjct: 61 RVKFEN-----GEERLILAPEALMLNEEVECGVKARVKPGNSLPLSEIPEGTPIYNIENR 115
Query: 120 VGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPL 179
GD G R SG YA +I+H D D I+LPSG K + CRA +G VAGGGR EKP
Sbjct: 116 PGDGGKLVRSSGTYASLITH--DADKAVIELPSGELKALNPQCRATVGVVAGGGRREKPF 173
Query: 180 LKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIA 239
LKAG YH R K VRGVAMN V+HPHGGGN QH G +TV R APPG+KVG IA
Sbjct: 174 LKAGKKYHALRAKGKKSVTVRGVAMNAVDHPHGGGNRQHPGRPTTVSRHAPPGRKVGSIA 233
Query: 240 ARRTGRLR 247
ARRTG+ R
Sbjct: 234 ARRTGKRR 241
>sp|Q6LX08|RL2_METMP 50S ribosomal protein L2P OS=Methanococcus maripaludis (strain S2 /
LL) GN=rpl2p PE=3 SV=1
Length = 240
Score = 222 bits (565), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 120/246 (48%), Positives = 158/246 (64%), Gaps = 8/246 (3%)
Query: 1 MGRVIRAQRKGAGS-VFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLA 59
MG+ + +Q +G G+ ++S TH RKG ++RS D E++G + G + +I+HDPGR AP+A
Sbjct: 1 MGKRLISQNRGRGTPKYRSPTHKRKGAVKYRSYDEMEKDGKILGTVIDILHDPGRSAPVA 60
Query: 60 RVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHH 119
+V F + ++ L + EG+ G+ + CG A + GNVLPL IPEG V N+E
Sbjct: 61 KVKFAN-----DEERLVLIPEGIQVGEEIECGISAEIKPGNVLPLGEIPEGIPVYNIETI 115
Query: 120 VGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPL 179
GD G R G YA VISH D T ++LPSG K++ CRA +G VAGGGR EKP
Sbjct: 116 PGDGGKLVRSGGCYAHVISH--DVGKTIVRLPSGFSKVLNPACRATVGVVAGGGRKEKPF 173
Query: 180 LKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIA 239
+KAG YH K WPKVRGVAMN V+HP+GGG HQHIG S+V R PG+KVG IA
Sbjct: 174 VKAGKKYHSLSAKAVAWPKVRGVAMNAVDHPYGGGRHQHIGKPSSVSRHTSPGRKVGHIA 233
Query: 240 ARRTGR 245
+RRTG+
Sbjct: 234 SRRTGK 239
>sp|B8D5W9|RL2_DESK1 50S ribosomal protein L2P OS=Desulfurococcus kamchatkensis (strain
1221n / DSM 18924) GN=rpl2p PE=3 SV=1
Length = 239
Score = 221 bits (564), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 126/249 (50%), Positives = 155/249 (62%), Gaps = 11/249 (4%)
Query: 1 MGRVIRAQRKGAGS-VFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLA 59
MG+ I QR+G S VFK+ H PAR+ LD + K V+ +++HDPGR PLA
Sbjct: 1 MGKRIIPQRRGKASPVFKTPDHIHVAPARYPLLDPSKT---YKAVVEDLVHDPGRWVPLA 57
Query: 60 RVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHH 119
+V + A EGMY GQ + G A V GN+LP+ IPEG V N+E
Sbjct: 58 QVKLETGLVF-----YVPAVEGMYAGQIIEIGPGAKPVNGNILPVGMIPEGMQVVNIEKR 112
Query: 120 VGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPL 179
GD G F R SG YAV++ T+++LPSG VP+ RAMIG +AGGGR EKPL
Sbjct: 113 PGDGGKFVRASGTYAVIVGR--AGGKTQVQLPSGRVIEVPNESRAMIGVIAGGGRLEKPL 170
Query: 180 LKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIA 239
LKAG AY+K+ K WPKVRGVAMN HPHGGG+HQH+G STV R+ PPG+KVG IA
Sbjct: 171 LKAGAAYYKWSAKSRVWPKVRGVAMNAAFHPHGGGSHQHVGRPSTVARNTPPGRKVGHIA 230
Query: 240 ARRTGRLRG 248
ARRTGR +G
Sbjct: 231 ARRTGRRKG 239
>sp|A6VHD5|RL2_METM7 50S ribosomal protein L2P OS=Methanococcus maripaludis (strain C7 /
ATCC BAA-1331) GN=rpl2p PE=3 SV=1
Length = 240
Score = 220 bits (560), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 119/246 (48%), Positives = 157/246 (63%), Gaps = 8/246 (3%)
Query: 1 MGRVIRAQRKGAGS-VFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLA 59
MG+ + +Q +G G+ ++S TH RKG ++RS D E++G + G + +I+HDPGR AP+A
Sbjct: 1 MGKRLISQNRGRGTPKYRSPTHKRKGAVKYRSYDEMEKDGKILGTVVDILHDPGRSAPVA 60
Query: 60 RVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHH 119
+V F ++ L + EG+ G+ + CG A + GNVLPL IPEG V N+E
Sbjct: 61 KVRF-----ANDEERLVLIPEGIQVGEEIECGISAEIKPGNVLPLGEIPEGIPVYNIETI 115
Query: 120 VGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPL 179
GD G R G YA V+SH D T +KLPSG K++ CRA +G VAGGGR EKP
Sbjct: 116 PGDGGKLVRSGGCYAHVVSH--DVGKTIVKLPSGFSKVLNPACRATVGVVAGGGRKEKPF 173
Query: 180 LKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIA 239
+KAG +H K WPKVRGVAMN V+HP+GGG HQH+G S+V R PG+KVG IA
Sbjct: 174 VKAGKKHHSLSAKAIAWPKVRGVAMNAVDHPYGGGRHQHLGKPSSVSRHTSPGRKVGHIA 233
Query: 240 ARRTGR 245
+RRTGR
Sbjct: 234 SRRTGR 239
>sp|A9A9B5|RL2_METM6 50S ribosomal protein L2P OS=Methanococcus maripaludis (strain C6 /
ATCC BAA-1332) GN=rpl2p PE=3 SV=1
Length = 240
Score = 219 bits (557), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 118/246 (47%), Positives = 157/246 (63%), Gaps = 8/246 (3%)
Query: 1 MGRVIRAQRKGAGS-VFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLA 59
MG+ + +Q +G G+ ++S +H RKG ++RS D E++G + G + +I+HDPGR AP+A
Sbjct: 1 MGKRLISQNRGRGTPKYRSPSHKRKGAVKYRSYDEMEKDGKILGTVVDILHDPGRSAPVA 60
Query: 60 RVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHH 119
+V F ++ L + EG+ G+ + CG A + GNVLPL IPEG V N+E
Sbjct: 61 KVRF-----ANDEERLVLIPEGIQVGEEIECGISAEIKPGNVLPLGEIPEGIPVYNIETI 115
Query: 120 VGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPL 179
GD G R G YA V+SH D T +KLPSG K++ CRA +G VAGGGR EKP
Sbjct: 116 PGDGGKLVRSGGCYAHVVSH--DVGKTIVKLPSGFSKVLNPACRATVGVVAGGGRKEKPF 173
Query: 180 LKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIA 239
+KAG +H K WPKVRGVAMN V+HP+GGG HQH+G S+V R PG+KVG IA
Sbjct: 174 VKAGKKHHSLSAKAIAWPKVRGVAMNAVDHPYGGGRHQHLGKPSSVSRHTSPGRKVGHIA 233
Query: 240 ARRTGR 245
+RRTGR
Sbjct: 234 SRRTGR 239
>sp|Q9YFN1|RL2_AERPE 50S ribosomal protein L2P OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=rpl2p PE=3
SV=1
Length = 238
Score = 218 bits (555), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 127/246 (51%), Positives = 153/246 (62%), Gaps = 12/246 (4%)
Query: 1 MGRVIRAQRKGAGS-VFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLA 59
MG+ +R QR G G+ ++S H GPA++ L L+G + E+IHDPGR PLA
Sbjct: 1 MGKRLRQQRAGRGTPTYRSRAHIHPGPAKYPPLS----GDTLRGKVVELIHDPGRYVPLA 56
Query: 60 RVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHH 119
RV R + L AAEGMY GQ + G A GN+LPL IPEG V NVE
Sbjct: 57 RVV-----REDGVEFLMPAAEGMYVGQIIEIGPAAKPEAGNILPLGKIPEGTEVFNVELR 111
Query: 120 VGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPL 179
GD G AR +G YA+V+ T ++LPSG K VP+ RA IG AG GR EKP+
Sbjct: 112 PGDGGKLARQAGSYALVVGRA--GAKTILRLPSGKDKEVPNDSRATIGIPAGAGRIEKPI 169
Query: 180 LKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIA 239
+KAG AYHK++VK WP+VRGVAMN V+HP GGG HQH G STV R APPG+KVG IA
Sbjct: 170 MKAGFAYHKWKVKARKWPRVRGVAMNAVDHPFGGGRHQHKGRPSTVARTAPPGRKVGHIA 229
Query: 240 ARRTGR 245
ARRTGR
Sbjct: 230 ARRTGR 235
>sp|B1L707|RL2_KORCO 50S ribosomal protein L2P OS=Korarchaeum cryptofilum (strain OPF8)
GN=rpl2p PE=3 SV=1
Length = 245
Score = 217 bits (552), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 121/253 (47%), Positives = 160/253 (63%), Gaps = 11/253 (4%)
Query: 1 MGRVIRAQRKGAGSV-FKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLA 59
MG+ I QR+G G + F+S H + PAR+ + ++GVI EI+H+PGR P++
Sbjct: 1 MGKRILVQRRGRGGIQFRSKDHLKIAPARYPQDGM---DNLMRGVIKEILHEPGRHTPIS 57
Query: 60 RVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHH 119
V + Q+ ++ EG+Y GQ + G+ A + GNVLPL IP+G++VCNVE
Sbjct: 58 LVELEN-----GQEFYYIPPEGVYEGQEIQIGKGAEVKTGNVLPLSEIPDGSLVCNVEIR 112
Query: 120 VGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPL 179
GD G AR SG YA+V SH + D ++LPS +K+V + CRA IG VAG GR EKP
Sbjct: 113 PGDGGKIARRSGTYAIVFSH--EGDKVILRLPSRKEKLVDARCRATIGVVAGSGRIEKPF 170
Query: 180 LKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIA 239
+KAG Y+ R WP VRGVAMNPV HPHGGG+H+ G +TV R APPGQKVG IA
Sbjct: 171 MKAGIKYYHERTHPKRWPVVRGVAMNPVSHPHGGGSHKRPGKPTTVARTAPPGQKVGHIA 230
Query: 240 ARRTGRLRGQAAA 252
AR+TGR + +AA
Sbjct: 231 ARKTGRAKRRAAT 243
>sp|Q8U001|RL2_PYRFU 50S ribosomal protein L2P OS=Pyrococcus furiosus (strain ATCC 43587
/ DSM 3638 / JCM 8422 / Vc1) GN=rpl2p PE=1 SV=1
Length = 239
Score = 216 bits (550), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 120/246 (48%), Positives = 154/246 (62%), Gaps = 10/246 (4%)
Query: 1 MGRVIRAQRKGAGS-VFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLA 59
MG+ + QR+G GS FKS +H +G ++ L++ + L+GV+ EI+HDPGR AP+A
Sbjct: 1 MGKSLIQQRRGKGSPTFKSPSHRFRGAVKYIPLNYTQEK-TLRGVVEEIMHDPGRTAPVA 59
Query: 60 RVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHH 119
RV F + ++L +A EG+ GQ +Y G A + VGN LPL IPEG V N+E
Sbjct: 60 RVKFENGI-----EKLIIAPEGLLVGQEIYIGPDAPIAVGNTLPLAKIPEGTYVYNIEGI 114
Query: 120 VGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPL 179
GD G + R G YA+V+S PD ++LPSG K CRA IG VAGGGR EKPL
Sbjct: 115 PGDGGKYVRAGGTYALVVSREPDKVI--VQLPSGELKAFNPMCRATIGVVAGGGRLEKPL 172
Query: 180 LKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIA 239
+KAG AY+K++ + WP RGV MN V HP GG H H G +T R APPG+KVG IA
Sbjct: 173 VKAGKAYYKYKARNKFWPTPRGVKMNAVNHPFGGKEH-HPGKPTTTSRRAPPGRKVGHIA 231
Query: 240 ARRTGR 245
ARRTGR
Sbjct: 232 ARRTGR 237
>sp|Q2NFV9|RL2_METST 50S ribosomal protein L2P OS=Methanosphaera stadtmanae (strain DSM
3091) GN=rpl2p PE=3 SV=1
Length = 241
Score = 216 bits (549), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 119/248 (47%), Positives = 156/248 (62%), Gaps = 8/248 (3%)
Query: 1 MGRVIRAQRKGAGS-VFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLA 59
MG+ + QR+G G+ ++S +H +G +RS D ER G L G++ +IIHDPGR AP+A
Sbjct: 1 MGKRLIIQRRGRGTPTYRSSSHRFRGKVAYRSYDKLEREGSLTGIVIDIIHDPGRSAPVA 60
Query: 60 RVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHH 119
V F + +++L +A E + + CG A++ GN LPL IPEG V N+E++
Sbjct: 61 VVKFDN-----GEEKLVLAPESIAIDDEIECGVSASIEPGNTLPLSEIPEGTPVFNIENN 115
Query: 120 VGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPL 179
GD G F R SG YA +I+H D D T I++PSG K RA +G VAGGGR EKP
Sbjct: 116 PGDGGKFVRSSGTYASLITH--DVDKTMIEMPSGELKAFNPRSRATVGVVAGGGRKEKPF 173
Query: 180 LKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIA 239
LKAGN YH + K VRGVAMN V+HPHGGGN QH G +T+ R AP G+KVG IA
Sbjct: 174 LKAGNRYHALKAKGKKMMTVRGVAMNAVDHPHGGGNRQHPGRPTTISRHAPAGRKVGSIA 233
Query: 240 ARRTGRLR 247
A+RTG+ R
Sbjct: 234 AKRTGKRR 241
>sp|A6UQJ3|RL2_METVS 50S ribosomal protein L2P OS=Methanococcus vannielii (strain SB /
ATCC 35089 / DSM 1224) GN=rpl2p PE=3 SV=1
Length = 240
Score = 216 bits (549), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/246 (47%), Positives = 158/246 (64%), Gaps = 8/246 (3%)
Query: 1 MGRVIRAQRKGAGS-VFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLA 59
MG+ + +Q +G G+ ++S +H RKG ++RS D E+ G + G + +++HDPGR AP+A
Sbjct: 1 MGKRLISQNRGRGTPKYRSPSHKRKGEVKYRSYDEMEKVGKVLGTVIDVLHDPGRSAPVA 60
Query: 60 RVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHH 119
+V F + ++ L + EG+ G+ + CG A + GNVLPL IPEG V N+E
Sbjct: 61 KVRFAN-----GEERLVLIPEGISVGEQIECGISAEIKPGNVLPLGEIPEGIPVYNIETI 115
Query: 120 VGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPL 179
GD G R G YA V++H D T +KLPSG K++ CRA IG VAGGGR EKP
Sbjct: 116 PGDGGKLVRAGGCYAHVVAH--DIGKTIVKLPSGYAKVLNPACRATIGVVAGGGRKEKPF 173
Query: 180 LKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIA 239
+KAG +H K WPKVRGVAMN V+HP+GGG HQH+G S+V R+ PG+KVG IA
Sbjct: 174 VKAGKKHHSLSAKAVAWPKVRGVAMNAVDHPYGGGRHQHLGKPSSVSRNTSPGRKVGHIA 233
Query: 240 ARRTGR 245
+RRTGR
Sbjct: 234 SRRTGR 239
>sp|P54017|RL2_METJA 50S ribosomal protein L2P OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=rpl2p PE=3 SV=2
Length = 242
Score = 214 bits (546), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 119/246 (48%), Positives = 157/246 (63%), Gaps = 9/246 (3%)
Query: 1 MGRVIRAQRKGAGS-VFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLA 59
MG+ + +QR+G GS V+ +H R+G A++R D E+ G + G I +I+HDPGR AP+A
Sbjct: 1 MGKRLISQRRGRGSSVYTCPSHKRRGEAKYRRFDELEKKGKVLGKIVDILHDPGRSAPVA 60
Query: 60 RVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHH 119
+V + ++ L V EG+ G + CG A + GN+LPL +IPEG V N+E
Sbjct: 61 KVEYE-----TGEEGLLVVPEGVKVGDIIECGVSAEIKPGNILPLGAIPEGIPVFNIETV 115
Query: 120 VGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPL 179
GD G R G YA +++H D + T +KLPSG K + S CRA IG VAGGGR EKP
Sbjct: 116 PGDGGKLVRAGGCYAHILTH--DGERTYVKLPSGHIKALHSMCRATIGVVAGGGRKEKPF 173
Query: 180 LKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTV-RRDAPPGQKVGLI 238
+KAG YH + K WP+VRGVAMN V+HP GGG HQH G +TV R+ PPG+KVG I
Sbjct: 174 VKAGKKYHAMKAKAVKWPRVRGVAMNAVDHPFGGGRHQHTGKPTTVSRKKVPPGRKVGHI 233
Query: 239 AARRTG 244
+ARRTG
Sbjct: 234 SARRTG 239
>sp|A6UV65|RL2_META3 50S ribosomal protein L2P OS=Methanococcus aeolicus (strain
Nankai-3 / ATCC BAA-1280) GN=rpl2p PE=3 SV=1
Length = 240
Score = 214 bits (545), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 121/247 (48%), Positives = 152/247 (61%), Gaps = 10/247 (4%)
Query: 1 MGRVIRAQRKGAGSV-FKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLA 59
MG+ +++Q +G G+ + S TH RKG ++R D ER + G I +I+HDPGR +P+A
Sbjct: 1 MGKRLQSQNRGKGTPRYTSPTHKRKGAVKYRKFDESERKDKIIGTIIDILHDPGRSSPIA 60
Query: 60 RVTFRHPFRYQHQKE-LFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEH 118
RV RY + +E L + EGM + CG A + GNVLPL +PEG V N+E
Sbjct: 61 RV------RYDNGEERLILIPEGMKIKDTIECGISAEIKPGNVLPLGEVPEGIPVYNIET 114
Query: 119 HVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKP 178
GD G R G YA VI+H D T IKLPSG K + CRA IG VAGGGR EKP
Sbjct: 115 IPGDGGKLVRSGGCYAHVITH--DVSKTIIKLPSGHMKTLNPMCRATIGVVAGGGRKEKP 172
Query: 179 LLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 238
+ KAG YH + K WP+VRGVAMN V+HP GGGN QH G +T+ R PG+KVG I
Sbjct: 173 ITKAGKKYHAMKAKAVLWPRVRGVAMNAVDHPFGGGNTQHAGKPTTISRHTSPGRKVGHI 232
Query: 239 AARRTGR 245
AARRTG+
Sbjct: 233 AARRTGK 239
>sp|Q5JDH2|RL2_PYRKO 50S ribosomal protein L2P OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=rpl2p PE=3 SV=1
Length = 239
Score = 213 bits (543), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 119/246 (48%), Positives = 155/246 (63%), Gaps = 10/246 (4%)
Query: 1 MGRVIRAQRKGAGSV-FKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLA 59
MG+ + QR+G G+ F++ +H +G R+ L+ + L+GV+ EI+HDPGR AP+A
Sbjct: 1 MGKSLIQQRRGKGTTTFRAPSHRYRGAVRYVPLNLVQER-TLRGVVEEILHDPGRTAPVA 59
Query: 60 RVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHH 119
RV F K+L +A EG+ GQ +Y G +A + +GN LPL IPEG V ++E
Sbjct: 60 RVKFE-----DGTKKLIIAPEGVLVGQEIYIGPEAPIAIGNTLPLAKIPEGTYVYDIEGV 114
Query: 120 VGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPL 179
GD G + R G YA+V+S + D ++LPSG K CRA IG VAGGGR EKP+
Sbjct: 115 PGDGGKYVRAGGTYALVVSR--EKDKVIVQLPSGELKAFNPMCRATIGVVAGGGRLEKPI 172
Query: 180 LKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIA 239
+KAG AY+ + + WPK RGV MN V HPHGG H HIG STV R APPG+KVG IA
Sbjct: 173 VKAGKAYYIAKARNRFWPKPRGVKMNAVNHPHGGKEH-HIGRPSTVSRRAPPGRKVGHIA 231
Query: 240 ARRTGR 245
ARRTGR
Sbjct: 232 ARRTGR 237
>sp|C5A283|RL2_THEGJ 50S ribosomal protein L2P OS=Thermococcus gammatolerans (strain DSM
15229 / JCM 11827 / EJ3) GN=rpl2p PE=3 SV=1
Length = 239
Score = 213 bits (542), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 119/246 (48%), Positives = 155/246 (63%), Gaps = 10/246 (4%)
Query: 1 MGRVIRAQRKGAGSV-FKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLA 59
MG+ + QR+G G+ F++ +H +G ++ L+ + L+GV+ EI+HDPGR AP+A
Sbjct: 1 MGKSLIQQRRGKGTTTFRAPSHRYRGAVKYVPLNI-VKEKTLRGVVEEILHDPGRTAPVA 59
Query: 60 RVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHH 119
RV F K+L +A EG+ GQ +Y G +A + +GN LPL IPEG V N+E
Sbjct: 60 RVKFE-----DGTKKLILAPEGVLVGQEIYIGPEAPIAIGNTLPLAKIPEGTYVYNIEGV 114
Query: 120 VGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPL 179
GD G + R G YA+V+S + D ++LPSG K CRA IG VAGGGR EKP+
Sbjct: 115 PGDGGKYVRAGGTYALVVSR--ERDKVIVQLPSGELKQFKPECRATIGVVAGGGRLEKPI 172
Query: 180 LKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIA 239
+KAG AY+ + + WPK RGV MN V HPHGG H HIG STV R APPG+KVG IA
Sbjct: 173 VKAGKAYYIAKARNRFWPKPRGVKMNAVNHPHGGKEH-HIGRPSTVSRRAPPGRKVGHIA 231
Query: 240 ARRTGR 245
ARRTGR
Sbjct: 232 ARRTGR 237
>sp|Q9V1T8|RL2_PYRAB 50S ribosomal protein L2P OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=rpl2p PE=3 SV=1
Length = 239
Score = 213 bits (542), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/246 (47%), Positives = 155/246 (63%), Gaps = 10/246 (4%)
Query: 1 MGRVIRAQRKGAGS-VFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLA 59
MG+ + QR+G GS F+S +H +G ++ L++ + + L+GV+ EI+HDPGR AP+A
Sbjct: 1 MGKSLIQQRRGKGSPTFRSPSHRFRGAVKYIPLNYTQ-DKTLRGVVEEIMHDPGRTAPVA 59
Query: 60 RVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHH 119
RV F + ++L +A EG+ GQ +Y G A + +GN LPL IPEG V N+E
Sbjct: 60 RVRFEN-----GMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGI 114
Query: 120 VGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPL 179
GD G + R G YA+V+S + D ++LPSG K CRA IG VAGGGR EKPL
Sbjct: 115 PGDGGKYVRAGGTYALVVSR--EKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPL 172
Query: 180 LKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIA 239
+KAG AY+K++ + WP RGV MN V HP GG H H G +T R APPG+KVG IA
Sbjct: 173 VKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGKEH-HPGKPTTTSRRAPPGRKVGHIA 231
Query: 240 ARRTGR 245
ARRTGR
Sbjct: 232 ARRTGR 237
>sp|A5UL86|RL2_METS3 50S ribosomal protein L2P OS=Methanobrevibacter smithii (strain PS
/ ATCC 35061 / DSM 861) GN=rpl2p PE=3 SV=1
Length = 241
Score = 213 bits (541), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/248 (46%), Positives = 156/248 (62%), Gaps = 8/248 (3%)
Query: 1 MGRVIRAQRKGAGS-VFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLA 59
MG+ + QR+G G+ + +H K R+RS D E+ G +KG++T+I+HDP R AP+A
Sbjct: 1 MGKRLIIQRRGRGTPAHRVASHRFKDKIRYRSYDALEKEGSIKGIVTDIVHDPARTAPIA 60
Query: 60 RVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHH 119
V F + +K+ +A E + + CG A + GN LPL IPEG + ++E+
Sbjct: 61 EVKFEN-----GEKKFILAPESIQIDDEIECGISAPIKFGNTLPLAEIPEGTPIYDIENT 115
Query: 120 VGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPL 179
GD G F R SG YA +I+H D + + ++LPSG K + CRA IG VAGGGR EKP
Sbjct: 116 PGDGGRFVRSSGTYASLITH--DANQSVVELPSGELKYLNPRCRASIGVVAGGGRKEKPF 173
Query: 180 LKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIA 239
LKAGN +H ++ K + VRGVAMN V+HPHGGGN QH G +TV R APPG+KVG IA
Sbjct: 174 LKAGNRWHAYKAKGKKFMTVRGVAMNAVDHPHGGGNRQHPGRPTTVSRHAPPGRKVGSIA 233
Query: 240 ARRTGRLR 247
A+RTG R
Sbjct: 234 AKRTGLKR 241
>sp|P21479|RL2_METVA 50S ribosomal protein L2P OS=Methanococcus vannielii GN=rpl2p PE=3
SV=1
Length = 237
Score = 212 bits (540), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/244 (47%), Positives = 156/244 (63%), Gaps = 8/244 (3%)
Query: 1 MGRVIRAQRKGAGS-VFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLA 59
MG+ + +Q +G G+ ++S +H RKG ++RS D E+ G + G + +++HDPGR AP+A
Sbjct: 1 MGKRLISQNRGRGTPKYRSPSHKRKGEVKYRSYDEMEKVGKVLGTVIDVLHDPGRSAPVA 60
Query: 60 RVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHH 119
+V F + ++ L + EG+ G+ + CG A + GNVLPL IPEG V N+E
Sbjct: 61 KVRFAN-----GEERLVLIPEGISVGEQIECGISAEIKPGNVLPLGEIPEGIPVYNIETI 115
Query: 120 VGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPL 179
GD G R G YA V++H D T +KLPSG K++ CRA IG VAGGGR EKP
Sbjct: 116 PGDGGKLVRAGGCYAHVVAH--DIGKTIVKLPSGYAKVLNPACRATIGVVAGGGRKEKPF 173
Query: 180 LKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIA 239
+KAG +H K WPKVRGVAMN V+HP+GGG HQH+G S+V R+ PG+KVG IA
Sbjct: 174 VKAGKKHHSLSAKAVAWPKVRGVAMNAVDHPYGGGRHQHLGKPSSVSRNTSPGRKVGHIA 233
Query: 240 ARRT 243
+RRT
Sbjct: 234 SRRT 237
>sp|O59421|RL2_PYRHO 50S ribosomal protein L2P OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=rpl2p PE=3 SV=1
Length = 239
Score = 211 bits (538), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/246 (46%), Positives = 155/246 (63%), Gaps = 10/246 (4%)
Query: 1 MGRVIRAQRKGAGS-VFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLA 59
MG+ + QR+G GS F+S +H +G ++ L++ + + ++GV+ EI+HDPGR AP+A
Sbjct: 1 MGKSLIQQRRGKGSPTFRSPSHRFRGAVKYIPLNYTQ-DKTIRGVVEEIMHDPGRTAPVA 59
Query: 60 RVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHH 119
RV F + ++L +A EG+ GQ +Y G A + +GN LPL IPEG + N+E
Sbjct: 60 RVKFEN-----GMEKLIIAPEGLLVGQEIYIGPDAPVEIGNTLPLAKIPEGTYIYNIEGV 114
Query: 120 VGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPL 179
GD G + R G YA+V+S + D ++LPSG K CRA IG VAGGGR EKPL
Sbjct: 115 PGDGGKYVRAGGTYALVVSR--EKDKVIVQLPSGELKAFDPNCRATIGVVAGGGRLEKPL 172
Query: 180 LKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIA 239
+KAG AY+K++ + WP RGV MN V HP GG H H G +T R APPG+KVG IA
Sbjct: 173 VKAGKAYYKYKARNKFWPTPRGVKMNAVNHPFGGKEH-HPGKPTTTSRRAPPGRKVGHIA 231
Query: 240 ARRTGR 245
ARRTGR
Sbjct: 232 ARRTGR 237
>sp|A2BMB2|RL2_HYPBU 50S ribosomal protein L2P OS=Hyperthermus butylicus (strain DSM
5456 / JCM 9403) GN=rpl2p PE=3 SV=1
Length = 238
Score = 207 bits (526), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 118/247 (47%), Positives = 153/247 (61%), Gaps = 14/247 (5%)
Query: 1 MGRVIRAQRKGAGS-VFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLA 59
MG+ + QR+G GS +++S PAR+ L L+G + E++HDPGR PLA
Sbjct: 1 MGKRLIVQRRGKGSPLYRSRPWLHPAPARYPPLTPVT----LRGRVVELVHDPGRWVPLA 56
Query: 60 RVTFRHPFRYQHQKELFV-AAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEH 118
+ ++ E ++ AAEGMY GQ + G A V GN+LP+ IPEG V N+E
Sbjct: 57 HIVL------ENGDEFYIPAAEGMYVGQIIEIGPDARPVNGNILPVGKIPEGTQVYNIEI 110
Query: 119 HVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKP 178
GD G R G YA+++ + + T I+LPSG K VP+ RA IG VAG GR EKP
Sbjct: 111 RPGDGGKLVRAYGTYAIILGRS--GNKTIIQLPSGKVKEVPNDARATIGIVAGAGRLEKP 168
Query: 179 LLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 238
LLKAG AY+K+ K + WP+VRGVAMN V HPHGGG+HQ +TV R+APPG+KVG I
Sbjct: 169 LLKAGAAYYKWSAKPHVWPRVRGVAMNAVNHPHGGGSHQSPSFPTTVSRNAPPGRKVGHI 228
Query: 239 AARRTGR 245
AAR TGR
Sbjct: 229 AARSTGR 235
>sp|Q0W1Y6|RL2_UNCMA 50S ribosomal protein L2P OS=Uncultured methanogenic archaeon RC-I
GN=rpl2p PE=3 SV=1
Length = 238
Score = 206 bits (525), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 113/249 (45%), Positives = 153/249 (61%), Gaps = 19/249 (7%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRS-----LDFGERNGYLKGVITEIIHDPGRG 55
MG+ + +Q +G GS +R +RF++ FG+ ++G+ITE++HDP R
Sbjct: 1 MGKRLMSQNRGKGS-----PTYRATSSRFKADLEHIKTFGDET--IEGIITEVVHDPARN 53
Query: 56 APLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCN 115
P+ RV F + ++ L +A EG+ G + CG A + GN LPL IPEG +CN
Sbjct: 54 CPIIRVKFGN-----GEERLILAPEGVGVGDKIACGISAEIKPGNTLPLSEIPEGCAICN 108
Query: 116 VEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRT 175
+E GD G FAR SG YA++++H + T +++PSG K + CRA IG VAGGGRT
Sbjct: 109 IESQPGDGGAFARSSGVYAIIVAH--EGKKTVVQMPSGEIKRLNPKCRATIGVVAGGGRT 166
Query: 176 EKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKV 235
EKP ++AGN ++K K WP VRGVAMN V+HP GGG QH G TV R+ PPG+KV
Sbjct: 167 EKPFVRAGNKWYKMANKATKWPVVRGVAMNAVDHPFGGGGRQHPGRPKTVSRNTPPGRKV 226
Query: 236 GLIAARRTG 244
G IAARRTG
Sbjct: 227 GSIAARRTG 235
>sp|A0B9W7|RL2_METTP 50S ribosomal protein L2P OS=Methanosaeta thermophila (strain DSM
6194 / PT) GN=rpl2p PE=3 SV=1
Length = 236
Score = 206 bits (524), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 113/246 (45%), Positives = 155/246 (63%), Gaps = 12/246 (4%)
Query: 1 MGRVIRAQRKGAGS-VFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLA 59
MG+ I +Q +G G+ +++ +H + A + + F ++G++ +I+HDP R AP+A
Sbjct: 1 MGKRIISQNRGKGTPTYRAPSHRYR--ADIKHIKFS--GDLVRGIVEDIMHDPARTAPVA 56
Query: 60 RVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHH 119
V + +K+ +A EG Y GQ + CG A + GN LPL SIPEG +CN+E
Sbjct: 57 LVRLEN-----GEKQYVLATEGTYIGQEIACGPAAEIQPGNTLPLASIPEGMPICNIESK 111
Query: 120 VGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPL 179
G G FAR SG Y ++++H D T ++LPSG K + C A IG VAGGGRTEKPL
Sbjct: 112 PGHGGQFARASGVYGILVAH--DVGATVVQLPSGEMKWLNPNCLATIGVVAGGGRTEKPL 169
Query: 180 LKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIA 239
+KAG +++K+R K WP+VRGVAMN V+HP GGG QH G TV R PPG+KVG IA
Sbjct: 170 VKAGKSFYKYRSKAVKWPRVRGVAMNAVDHPFGGGGRQHPGRPKTVSRGTPPGRKVGSIA 229
Query: 240 ARRTGR 245
ARRTG+
Sbjct: 230 ARRTGK 235
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 104,902,583
Number of Sequences: 539616
Number of extensions: 4723132
Number of successful extensions: 12775
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1049
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 8981
Number of HSP's gapped (non-prelim): 1061
length of query: 260
length of database: 191,569,459
effective HSP length: 115
effective length of query: 145
effective length of database: 129,513,619
effective search space: 18779474755
effective search space used: 18779474755
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)