BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024951
(260 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase
Family Protein (Cc_0200) From Caulobacter Crescentus At
1.44 A Resolution
pdb|3OOX|B Chain B, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase
Family Protein (Cc_0200) From Caulobacter Crescentus At
1.44 A Resolution
Length = 312
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 114/267 (42%), Gaps = 26/267 (9%)
Query: 3 NESKKFFSLQLEDKMKLA--RKEHRGYTALCDEILDPSSTSEGDPKESFYIG---PLEGT 57
+ +K FF+L +E K + A + RGY E D KE ++ G P
Sbjct: 53 DSAKAFFALPVETKKQYAGVKGGARGYIPFGVETA--KGADHYDLKEFWHXGRDLPPGHR 110
Query: 58 LSSM---NQWPSLEILPTWRSTMEYYHQKVLSAGXXXXXXXXXXXXXXEDFFEKVGALDA 114
+ N WP+ +P ++ + + + + G DFF+ +
Sbjct: 111 FRAHXADNVWPAE--IPAFKHDVSWLYNSLDGXGGKVLEAIATYLKLERDFFKPT--VQD 166
Query: 115 PMAFLRLLHYPGELVSSNQEVCGASAHSDYGMITLLATDGVPGLQVCREKFNQPRLWEDV 174
+ LRLLHYP + + A AH D ITLL GL+V ++ W +
Sbjct: 167 GNSVLRLLHYPP--IPKDATGVRAGAHGDINTITLLLGAEEGGLEV----LDRDGQWLPI 220
Query: 175 PNIKGALIVNIGDMMERWTNCLFRSTLHRVMS-----SGQERYSAAFFLDPNGDCVVXXX 229
G L++NIGD +ER TN + ST+HRV++ G RYS FFL D +
Sbjct: 221 NPPPGCLVINIGDXLERLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTL 280
Query: 230 XXXXXXXNPPKFA-PIRSGDYIKERIR 255
NP ++ I + +++++R+R
Sbjct: 281 QNCVTAENPDRYPESITADEFLQQRLR 307
>pdb|3ON7|A Chain A, Crystal Structure Of A Putative Oxygenase (So_2589) From
Shewanella Oneidensis At 2.20 A Resolution
pdb|3ON7|B Chain B, Crystal Structure Of A Putative Oxygenase (So_2589) From
Shewanella Oneidensis At 2.20 A Resolution
pdb|3ON7|C Chain C, Crystal Structure Of A Putative Oxygenase (So_2589) From
Shewanella Oneidensis At 2.20 A Resolution
pdb|3ON7|D Chain D, Crystal Structure Of A Putative Oxygenase (So_2589) From
Shewanella Oneidensis At 2.20 A Resolution
Length = 280
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Query: 117 AFLRLLHYPGELVSSNQEVCGASAHSDYGMITLLATDGVPGLQVCREKFNQPRLWEDVPN 176
LR+LHYP A+AH D +IT+L T PGLQV + + W DVP+
Sbjct: 150 TLLRILHYPPXTGDEEXGAIRAAAHEDINLITVLPTANEPGLQVKAKDGS----WLDVPS 205
Query: 177 IKGALIVNIGDMMERWTNCLFRSTLHRVMS-----SGQERYSAAFFLDPNGDCVV 226
G +I+NIGD ++ ++ F ST HRV++ + R S FL P+ V+
Sbjct: 206 DFGNIIINIGDXLQEASDGYFPSTSHRVINPEGTDKTKSRISLPLFLHPHPSVVL 260
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase
pdb|1WA6|X Chain X, The Structure Of Acc Oxidase
Length = 319
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 135 VCGASAHSDYGMITLL-ATDGVPGLQVCREKFNQPRLWEDVPNIKGALIVNIGDMMERWT 193
+ G AH+D G I LL D V GLQ+ ++ W DVP + +++VN+GD +E T
Sbjct: 171 IKGLRAHTDAGGIILLFQDDKVSGLQLLKDG-----QWIDVPPXRHSIVVNLGDQLEVIT 225
Query: 194 NCLFRSTLHRVMSSGQ-ERYSAAFFLDPNGDCVV 226
N ++S HRV++ R S A F +P D V+
Sbjct: 226 NGKYKSVXHRVIAQKDGARXSLASFYNPGSDAVI 259
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed
With Naringenin
Length = 355
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 110/253 (43%), Gaps = 14/253 (5%)
Query: 6 KKFFSLQLEDKMKLARKEHRGYTALCDEILDPSSTSEGDPKESFYIGPLEGTLSSMNQWP 65
++FFSL +E+K K A + G L +++ + + ++ F+ ++ WP
Sbjct: 99 EEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWP 158
Query: 66 SLEILPT--WRSTMEYYHQKVLSAGXXXXXXXXXXXXXXEDFFEKVGALDAPMAFLRLLH 123
P+ +T EY L A + ++VG L+ + +++ +
Sbjct: 159 KT---PSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINY 215
Query: 124 YPGELVSSNQEVCGASAHSDYGMITLLATDGVPGLQVCREKFNQPRLWEDVPNIKGALIV 183
YP + G AH+D +T + + VPGLQ+ E W + ++++
Sbjct: 216 YPK--CPQPELALGVEAHTDVSALTFILHNMVPGLQLFYEG-----KWVTAKCVPDSIVM 268
Query: 184 NIGDMMERWTNCLFRSTLHR-VMSSGQERYSAAFFLDPNGDCVVXX-XXXXXXXXNPPKF 241
+IGD +E +N ++S LHR +++ + R S A F +P D +V +P KF
Sbjct: 269 HIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKF 328
Query: 242 APIRSGDYIKERI 254
P +I+ ++
Sbjct: 329 PPRTFAQHIEHKL 341
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed
With Trans-Dihydroquercetin
pdb|1GP6|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed
With Trans-Dihydroquercetin (With 30 Min Exposure To O2)
Length = 356
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 110/253 (43%), Gaps = 14/253 (5%)
Query: 6 KKFFSLQLEDKMKLARKEHRGYTALCDEILDPSSTSEGDPKESFYIGPLEGTLSSMNQWP 65
++FFSL +E+K K A + G L +++ + + ++ F+ ++ WP
Sbjct: 100 EEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWP 159
Query: 66 SLEILPT--WRSTMEYYHQKVLSAGXXXXXXXXXXXXXXEDFFEKVGALDAPMAFLRLLH 123
P+ +T EY L A + ++VG L+ + +++ +
Sbjct: 160 KT---PSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINY 216
Query: 124 YPGELVSSNQEVCGASAHSDYGMITLLATDGVPGLQVCREKFNQPRLWEDVPNIKGALIV 183
YP + G AH+D +T + + VPGLQ+ E W + ++++
Sbjct: 217 YPK--CPQPELALGVEAHTDVSALTFILHNMVPGLQLFYEG-----KWVTAKCVPDSIVM 269
Query: 184 NIGDMMERWTNCLFRSTLHR-VMSSGQERYSAAFFLDPNGDCVVXX-XXXXXXXXNPPKF 241
+IGD +E +N ++S LHR +++ + R S A F +P D +V +P KF
Sbjct: 270 HIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKF 329
Query: 242 APIRSGDYIKERI 254
P +I+ ++
Sbjct: 330 PPRTFAQHIEHKL 342
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana
(Selenomethionine Substituted)
Length = 356
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 109/253 (43%), Gaps = 14/253 (5%)
Query: 6 KKFFSLQLEDKMKLARKEHRGYTALCDEILDPSSTSEGDPKESFYIGPLEGTLSSMNQWP 65
++FFSL +E+K K A + G L +++ + + ++ F+ ++ WP
Sbjct: 100 EEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWP 159
Query: 66 SLEILPT--WRSTMEYYHQKVLSAGXXXXXXXXXXXXXXEDFFEKVGALDAPMAFLRLLH 123
P+ +T EY L A + ++VG L+ + ++ +
Sbjct: 160 KT---PSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQXKINY 216
Query: 124 YPGELVSSNQEVCGASAHSDYGMITLLATDGVPGLQVCREKFNQPRLWEDVPNIKGALIV 183
YP + G AH+D +T + + VPGLQ+ E W + +++
Sbjct: 217 YPK--CPQPELALGVEAHTDVSALTFILHNXVPGLQLFYEG-----KWVTAKCVPDSIVX 269
Query: 184 NIGDMMERWTNCLFRSTLHR-VMSSGQERYSAAFFLDPNGDCVVXX-XXXXXXXXNPPKF 241
+IGD +E +N ++S LHR +++ + R S A F +P D +V +P KF
Sbjct: 270 HIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEXVSVESPAKF 329
Query: 242 APIRSGDYIKERI 254
P +I+ ++
Sbjct: 330 PPRTFAQHIEHKL 342
>pdb|1IPS|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans
(Manganese Complex)
pdb|1IPS|B Chain B, Isopenicillin N Synthase From Aspergillus Nidulans
(Manganese Complex)
pdb|1QJE|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans (Ip1 -
Fe Complex)
pdb|1QJF|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans
(Monocyclic Sulfoxide - Fe Complex)
pdb|1QIQ|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans (Acmc
Fe Complex)
pdb|1HB4|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans (Oxygen
Exposed Product From Anaerobic Acov Fe Complex)
pdb|1HB3|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans (Oxygen
Exposed Product From Anaerobic Acov Fe Complex)
pdb|1HB2|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans (Oxygen
Exposed Product From Anaerobic Acov Fe Complex)
pdb|1HB1|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans
(Anaerobic Acov Fe Complex)
pdb|1ODM|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans
(anaerobic Ac-vinylglycine Fe Complex)
pdb|1ODN|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans
(Oxygen-Exposed Product From Anaerobic Ac-Vinylglycine
Fe Complex)
pdb|1OBN|A Chain A, Isopenicillin N Synthase
Aminoadipoyl-cysteinyl-aminobutyrate-fe-no Complex
pdb|1OC1|A Chain A, Isopenicillin N Synthase
Aminoadipoyl-cysteinyl-aminobutyrate-fe Complex
pdb|1UZW|A Chain A, Isopenicillin N Synthase With
L-D-(A-Aminoadipoyl)-L-Cysteinyl-D-Isodehydrovaline
pdb|1W03|A Chain A, Isopenicillin N Synthase Aminoadipoyl-Cysteinyl-Glycine-Fe
Complex
pdb|1W04|A Chain A, Isopenicillin N Synthase
Aminoadipoyl-Cysteinyl-Glycine-Fe-No Complex
pdb|1W05|A Chain A, Isopenicillin N Synthase Aminoadipoyl-Cysteinyl-Alanine-Fe
Complex
pdb|1W06|A Chain A, Isopenicillin N Synthase Aminoadipoyl-Cysteinyl-Alanine-Fe
No Complex
pdb|2BU9|A Chain A, Isopenicillin N Synthase Complexed With L-Aminoadipoyl-L-
Cysteinyl-L-Hexafluorovaline
pdb|1W3V|A Chain A, Isopenicillin N Synthase
D-(L-A-Aminoadipoyl)-(3r)-Methyl-L- Cysteine
D-A-Hydroxyisovaleryl Ester Complex (Anaerobic)
pdb|1W3X|A Chain A, Isopenicillin N Synthase
D-(L-A-Aminoadipoyl)-(3r)-Methyl-L- Cysteine
D-A-Hydroxyisovaleryl Ester Complex (Oxygen Exposed 5
Minutes 20 Bar)
pdb|2IVI|B Chain B, Isopenicillin N Synthase From Aspergillus Nidulans
(anaerobic Ac-methyl-cyclopropylglycine Fe Complex)
pdb|2IVJ|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans
(Anaerobic Ac-Cyclopropylglycine Fe Complex)
pdb|1BK0|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans (Acv-Fe
Complex)
pdb|1BLZ|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans
(Acv-Fe- No Complex)
pdb|2JB4|A Chain A, Isopenicillin N Synthase With A 2-Thiabicycloheptan-6-One
Product Analogue
pdb|2VAU|A Chain A, Isopenicillin N Synthase With Substrate Analogue Acomp (
Unexposed)
pdb|2VBB|A Chain A, Isopenicillin N Synthase With Substrate Analogue Acomp (
35minutes Oxygen Exposure)
pdb|2VBD|A Chain A, Isopenicillin N Synthase With Substrate Analogue L,l,l-
Acomp (unexposed)
pdb|2VBP|A Chain A, Isopenicillin N Synthase With Substrate Analogue
L,L,L-Acab (Unexposed)
pdb|2VCM|A Chain A, Isopenicillin N Synthase With Substrate Analogue Asmcov
pdb|2VE1|A Chain A, Isopenicillin N Synthase With Substrate Analogue Asmcov (
Oxygen Exposed 1min 20bar)
pdb|2WO7|A Chain A, Isopenicillin N Synthase With Substrate Analogue L,L,D-
Acd2ab (Unexposed)
pdb|2Y6F|A Chain A, Isopenicillin N Synthase With
Ac-D-S-Methyl-3r-Methylcysteine
pdb|2Y60|A Chain A, Isopenicillin N Synthase With Ac-D-Methionine
pdb|2Y86|A Chain A, Isopenicillin N Synthase With Ac-O-Methyl-D-Threonine
pdb|3ZKU|A Chain A, Isopenicillin N Synthase With Substrate Analogue Ahcv
Length = 331
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 66/174 (37%), Gaps = 13/174 (7%)
Query: 61 MNQWPSLEILPTWRSTMEYYHQKVLSAGXXXXXXXXXXXXXXEDFFEKVGALDAPMAFLR 120
+N WP P ++ E Y+ V E+FF + D +A +
Sbjct: 126 VNVWPDETKHPGFQDFAEQYYWDVFGLSSALLKGYALALGKEENFFARHFKPDDTLASVV 185
Query: 121 LLHYP--------GELVSSNQEVCGASAHSDYGMITLLATDGVPGLQVCREKFNQPRLWE 172
L+ YP +++ H D +IT+L V LQV ++
Sbjct: 186 LIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQSNVQNLQV-----ETAAGYQ 240
Query: 173 DVPNIKGALIVNIGDMMERWTNCLFRSTLHRVMSSGQERYSAAFFLDPNGDCVV 226
D+ ++N G M TN +++ +HRV ER S FF++ D V+
Sbjct: 241 DIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKWVNAERQSLPFFVNLGYDSVI 294
>pdb|2BJS|A Chain A, Isopenicillin N Synthase C-Terminal Truncation Mutant
Length = 325
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 66/174 (37%), Gaps = 13/174 (7%)
Query: 61 MNQWPSLEILPTWRSTMEYYHQKVLSAGXXXXXXXXXXXXXXEDFFEKVGALDAPMAFLR 120
+N WP P ++ E Y+ V E+FF + D +A +
Sbjct: 126 VNVWPDETKHPGFQDFAEQYYWDVFGLSSALLKGYALALGKEENFFARHFKPDDTLASVV 185
Query: 121 LLHYP--------GELVSSNQEVCGASAHSDYGMITLLATDGVPGLQVCREKFNQPRLWE 172
L+ YP +++ H D +IT+L V LQV ++
Sbjct: 186 LIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQSNVQNLQV-----ETAAGYQ 240
Query: 173 DVPNIKGALIVNIGDMMERWTNCLFRSTLHRVMSSGQERYSAAFFLDPNGDCVV 226
D+ ++N G M TN +++ +HRV ER S FF++ D V+
Sbjct: 241 DIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKWVNAERQSLPFFVNLGYDSVI 294
>pdb|1E5H|A Chain A, Delta-R307a Deacetoxycephalosporin C Synthase Complexed
With Succinate And Carbon Dioxide
Length = 308
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 49/118 (41%), Gaps = 17/118 (14%)
Query: 118 FLRLLHYPG--ELVSSNQEVCGASAHSDYGMITLL----ATDGVPGLQVCREKFNQPRLW 171
LR ++P E S+ ++ + H D M+TL+ +G LQ +
Sbjct: 158 LLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQA-----EVGGAF 212
Query: 172 EDVPNIKGALIVNIGDMMERWTNCLFRSTLHRVMS------SGQERYSAAFFLDPNGD 223
D+P A++V G + T ++ H V + +G R S+ FFL PN D
Sbjct: 213 TDLPYRPDAVLVFCGAIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNAD 270
>pdb|1UNB|A Chain A, Deacetoxycephalosporin C Synthase Complexed With
2-Oxoglutarate And Ampicillin
pdb|1UO9|A Chain A, Deacetoxycephalosporin C Synthase Complexed With Succinate
pdb|1UOB|A Chain A, Deacetoxycephalosporin C Synthase Complexed With
2-Oxoglutarate And Penicillin G
pdb|1UOF|A Chain A, Deacetoxycephalosporin C Synthase Complexed With
Penicillin G
pdb|1UOG|A Chain A, Deacetoxycephalosporin C Synthase Complexed With
Deacetoxycephalosporin C
pdb|1DCS|A Chain A, Deacetoxycephalosporin C Synthase From S. Clavuligerus
pdb|1RXF|A Chain A, Deacetoxycephalosporin C Synthase Complexed With Fe(Ii)
pdb|1RXG|A Chain A, Deacetoxycephalosporin C Synthase Complexed With Fe(Ii)
And 2- Oxoglutarate
pdb|2JB8|A Chain A, Deacetoxycephalosporin C Synthase Complexed With
5-hydroxy- 4-keto Valeric Acid
Length = 311
Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 49/118 (41%), Gaps = 17/118 (14%)
Query: 118 FLRLLHYPG--ELVSSNQEVCGASAHSDYGMITLL----ATDGVPGLQVCREKFNQPRLW 171
LR ++P E S+ ++ + H D M+TL+ +G LQ +
Sbjct: 158 LLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQA-----EVGGAF 212
Query: 172 EDVPNIKGALIVNIGDMMERWTNCLFRSTLHRVMS------SGQERYSAAFFLDPNGD 223
D+P A++V G + T ++ H V + +G R S+ FFL PN D
Sbjct: 213 TDLPYRPDAVLVFCGAIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNAD 270
>pdb|1E5I|A Chain A, Delta-R306 Deacetoxycephalosporin C Synthase Complexed
With Iron And 2-Oxoglutarate
Length = 306
Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 49/118 (41%), Gaps = 17/118 (14%)
Query: 118 FLRLLHYPG--ELVSSNQEVCGASAHSDYGMITLL----ATDGVPGLQVCREKFNQPRLW 171
LR ++P E S+ ++ + H D M+TL+ +G LQ +
Sbjct: 158 LLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQA-----EVGGAF 212
Query: 172 EDVPNIKGALIVNIGDMMERWTNCLFRSTLHRVMS------SGQERYSAAFFLDPNGD 223
D+P A++V G + T ++ H V + +G R S+ FFL PN D
Sbjct: 213 TDLPYRPDAVLVFCGAIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNAD 270
>pdb|1W28|A Chain A, Conformational Flexibility Of The C-Terminus With
Implications For Substrate Binding And Catalysis In A
New Crystal Form Of Deacetoxycephalosporin C Synthase
pdb|1W2A|X Chain X, Deacetoxycephalosporin C Synthase (With His-Tag) Complexed
With Fe(Ii) And Ethylene Glycol
pdb|1W2N|A Chain A, Deacetoxycephalosporin C Synthase (With A N-Terminal His-
Tag) In Complex With Fe(Ii) And Ampicillin
pdb|1W2O|A Chain A, Deacetoxycephalosporin C Synthase (With A N-Terminal His-
Tag) In Complex With Fe(Ii) And Deacetoxycephalosporin C
Length = 331
Score = 32.0 bits (71), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 49/118 (41%), Gaps = 17/118 (14%)
Query: 118 FLRLLHYPG--ELVSSNQEVCGASAHSDYGMITLL----ATDGVPGLQVCREKFNQPRLW 171
LR ++P E S+ ++ + H D M+TL+ +G LQ +
Sbjct: 178 LLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQA-----EVGGAF 232
Query: 172 EDVPNIKGALIVNIGDMMERWTNCLFRSTLHRVMS------SGQERYSAAFFLDPNGD 223
D+P A++V G + T ++ H V + +G R S+ FFL PN D
Sbjct: 233 TDLPYRPDAVLVFCGAIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNAD 290
>pdb|1HJF|A Chain A, Alteration Of The Co-Substrate Selectivity Of
Deacetoxycephalosporin C Synthase: The Role Of
Arginine-258
pdb|1HJG|A Chain A, Alteration Of The Co-Substrate Selectivity Of
Deacetoxycephalosporin C Synthase: The Role Of
Arginine-258
Length = 311
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 49/118 (41%), Gaps = 17/118 (14%)
Query: 118 FLRLLHYPG--ELVSSNQEVCGASAHSDYGMITLL----ATDGVPGLQVCREKFNQPRLW 171
LR ++P E S+ ++ + H D M+TL+ +G LQ +
Sbjct: 158 LLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQA-----EVGGAF 212
Query: 172 EDVPNIKGALIVNIGDMMERWTNCLFRSTLHRVMS------SGQERYSAAFFLDPNGD 223
D+P A++V G + T ++ H V + +G + S+ FFL PN D
Sbjct: 213 TDLPYRPDAVLVFCGAIATLVTGGQVKAPRHHVAAPRRDQIAGSSQTSSVFFLRPNAD 270
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,420,732
Number of Sequences: 62578
Number of extensions: 271051
Number of successful extensions: 529
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 512
Number of HSP's gapped (non-prelim): 14
length of query: 260
length of database: 14,973,337
effective HSP length: 97
effective length of query: 163
effective length of database: 8,903,271
effective search space: 1451233173
effective search space used: 1451233173
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.9 bits)