BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024960
(260 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q84WU2|UBP13_ARATH Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana
GN=UBP13 PE=1 SV=1
Length = 1115
Score = 87.8 bits (216), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 81/147 (55%), Gaps = 10/147 (6%)
Query: 14 PPADY-SLKIE-SFKLLSKSTVESFESGVFKSGGYNWKLVFYPNGKKNDGGKDHLSLYLK 71
PP D SLK + + ++ S VF GGY W+++ +P G DHLS+YL
Sbjct: 47 PPEDPPSLKFTWTIPMFTRLNTRKHYSDVFVVGGYKWRILIFPKG----NNVDHLSMYLD 102
Query: 72 IDDSNPHPDGTWNVNVYYKLFVYDQVSNQYLVVQDAKAPMRRFDRRKTDWGFGKFLDLAT 131
+ D+ P G W+ + L V +QV+N+Y + ++ + +F+ R++DWGF F+ L+
Sbjct: 103 VADAANLPYG-WSRYSQFSLAVVNQVNNRYSIRKETQ---HQFNARESDWGFTSFMPLSE 158
Query: 132 FNEPSNGYLVDDTCAFGAEVYVVKPTD 158
EP+ GYLV+DT AEV V K D
Sbjct: 159 LYEPTRGYLVNDTVLIEAEVAVRKVLD 185
Score = 39.3 bits (90), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 167 SDPADGNYRFNIPAFGSVGDTVQRSSEFTVGERNWQLVVYPAGSGADRGNFLTVSLKLAD 226
DP + + IP F + S F VG W+++++P G+ D L++ L +AD
Sbjct: 49 EDPPSLKFTWTIPMFTRLNTRKHYSDVFVVGGYKWRILIFPKGNNVDH---LSMYLDVAD 105
Query: 227 YQTVSRKKPVYAEFKFKIPNQ 247
+ Y++F + NQ
Sbjct: 106 AANLPYGWSRYSQFSLAVVNQ 126
>sp|Q9FPT1|UBP12_ARATH Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana
GN=UBP12 PE=1 SV=2
Length = 1116
Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 77/145 (53%), Gaps = 11/145 (7%)
Query: 14 PPADYSLKIESFKLLSKSTVESFESGVFKSGGYNWKLVFYPNGKKNDGGKDHLSLYLKID 73
P ++ I +F S+ S VF GGY W+++ +P G DHLS+YL +
Sbjct: 53 PTLKFTWTIPNF---SRQNTRKHYSDVFVVGGYKWRILIFPKG----NNVDHLSMYLDVS 105
Query: 74 DSNPHPDGTWNVNVYYKLFVYDQVSNQYLVVQDAKAPMRRFDRRKTDWGFGKFLDLATFN 133
D+ P G W+ + L V +Q+ +Y V ++ + +F+ R++DWGF F+ L+
Sbjct: 106 DAASLPYG-WSRYAQFSLAVVNQIHTRYTVRKETQ---HQFNARESDWGFTSFMPLSELY 161
Query: 134 EPSNGYLVDDTCAFGAEVYVVKPTD 158
+PS GYLV+DT AEV V K D
Sbjct: 162 DPSRGYLVNDTVLVEAEVAVRKVLD 186
Score = 37.7 bits (86), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 167 SDPADGNYRFNIPAFGSVGDTVQRSSEFTVGERNWQLVVYPAGSGADRGNFLTVSLKLAD 226
DP + + IP F S F VG W+++++P G+ D L++ L ++D
Sbjct: 50 EDPPTLKFTWTIPNFSRQNTRKHYSDVFVVGGYKWRILIFPKGNNVDH---LSMYLDVSD 106
Query: 227 YQTVSRKKPVYAEFKFKIPNQ 247
++ YA+F + NQ
Sbjct: 107 AASLPYGWSRYAQFSLAVVNQ 127
>sp|Q8T126|FNKC_DICDI Probable inactive serine/threonine-protein kinase fnkC
OS=Dictyostelium discoideum GN=fnkC PE=3 SV=1
Length = 1304
Score = 53.9 bits (128), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/135 (28%), Positives = 69/135 (51%), Gaps = 18/135 (13%)
Query: 24 SFKLLSKSTVESFESGVFKSGGYNWKLVFYPNGKKNDGGKDHLSLYLKIDDSNPHPDGTW 83
S ++SK + E F S +F S G W + YP G+ + +++S++L+ D +G
Sbjct: 1178 SVPMMSKKS-EPFISPIFMSCGRKWIIKIYPMGQPS---SNYMSVFLEYRD-----EGEE 1228
Query: 84 NVNVYYKLF--VYDQVSNQYLVVQDAKAPMRRFDRRKTDWGFGKFLDLATFNEPSNGYLV 141
NV+ +L +Y + S +Y V RF+ + +G+ KF+ ++T +P G+LV
Sbjct: 1229 NVHFSLELISQLYPEQSIKYWV-------QYRFNSKSNSFGYPKFIGVSTLMDPDMGFLV 1281
Query: 142 DDTCAFGAEVYVVKP 156
+DT + +KP
Sbjct: 1282 NDTIILNVSILQLKP 1296
Score = 49.3 bits (116), Expect = 3e-05, Method: Composition-based stats.
Identities = 54/201 (26%), Positives = 90/201 (44%), Gaps = 24/201 (11%)
Query: 34 ESFESGVFKSGGYNWKLVFYPNGKK-NDGGKDHLSLYLKIDDSNPHPDGTW-NVNVYYKL 91
+ F S +F G NW+ FY NGK + GK LS+++ D +P + ++ YKL
Sbjct: 1040 DQFYSPIFSLIGSNWRCKFYSNGKDASTSGK--LSIFISNCDLLNNPFTIFLEKSISYKL 1097
Query: 92 FVYDQVSNQYLVVQDAKAPMRRFDRRKTDWGFGKFLDLATFNEPSNGYLVDDTCAFGAEV 151
+ +Q N +Q K+ F ++ + G+G F+ L + P+NG+LV++T +
Sbjct: 1098 TLINQ-KNPNESIQ--KSSSHTFSIKEFNHGYGSFIGLFSLLNPNNGFLVNNTIKVRIDA 1154
Query: 152 YVVKPTDSEEILSLVSDPADGNYRFNIPAFGSVGDTVQRSSE------FTVGERNWQLVV 205
P LV+ N N AF + + SE F R W + +
Sbjct: 1155 APTSP--------LVNTYDKYNIGLN-QAFSYSVPMMSKKSEPFISPIFMSCGRKWIIKI 1205
Query: 206 YPAGSGADRGNFLTVSLKLAD 226
YP G + N+++V L+ D
Sbjct: 1206 YPMGQPSS--NYMSVFLEYRD 1224
>sp|Q8RY18|Y5436_ARATH MATH domain-containing protein At5g43560 OS=Arabidopsis thaliana
GN=At5g43560 PE=1 SV=1
Length = 1055
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 15/135 (11%)
Query: 22 IESFKLLSKSTVESFESGVFKSGGYNWKLVFYPNGKKNDGGKDHLSLYLKIDDSNPHPDG 81
IE F ++K VF+ GGY W ++ YP G +HLSL+L + G
Sbjct: 75 IEKFSDINK---RELRGDVFEVGGYKWYILIYPQGCD---VCNHLSLFLCVAHHEKLLPG 128
Query: 82 TWNVNVYYKLFVYDQVSNQYLVVQDAKAPMRRFDRRKTDWGFGKFLDLATFNEPSNGYLV 141
W+ ++ F VSN+ + RF +++ DWG+ KF++L E G++
Sbjct: 129 -WS---HFAQFTI-AVSNKDPKKSKHSDTLHRFWKKEHDWGWKKFIELPKLKE---GFID 180
Query: 142 DDTC-AFGAEVYVVK 155
D C A+V V++
Sbjct: 181 DSGCLTIKAQVQVIR 195
Score = 32.0 bits (71), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Query: 172 GNYRFNIPAFGSVGDTVQRSSEFTVGERNWQLVVYPAGSGADRGNFLTVSLKLADYQTVS 231
G + I F + R F VG W +++YP G D N L++ L +A ++ +
Sbjct: 69 GKNTWTIEKFSDINKRELRGDVFEVGGYKWYILIYP--QGCDVCNHLSLFLCVAHHEKLL 126
Query: 232 RKKPVYAEFKFKIPNQ 247
+A+F + N+
Sbjct: 127 PGWSHFAQFTIAVSNK 142
>sp|O22286|BPM3_ARATH BTB/POZ and MATH domain-containing protein 3 OS=Arabidopsis
thaliana GN=BPM3 PE=1 SV=1
Length = 408
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 57/132 (43%), Gaps = 27/132 (20%)
Query: 36 FESGVFKSGGYNWKLVFYPNGKKNDGGKDHLSLYLKI-DDSNPHPDGTWNVNVYYKLFVY 94
+S +F GGY+W + FYP+GK + ++SL++ + DSN ++ ++L +
Sbjct: 46 IQSDIFSVGGYDWAIYFYPDGKNPEDQSSYISLFIALASDSN-------DIRALFELTLM 98
Query: 95 DQVSNQYLVVQDAKAPMRRFDR-----------RKTDWGFGKFLDLATFNEPSNGYLVDD 143
DQ V FDR + + WG+ +F + ++ YL DD
Sbjct: 99 DQSGKGKHKVHS------HFDRALEGGPYTLKYKGSMWGYKRFFKRSALE--TSDYLKDD 150
Query: 144 TCAFGAEVYVVK 155
V VV+
Sbjct: 151 CLVINCTVGVVR 162
>sp|P34568|BAT43_CAEEL BTB and MATH domain-containing protein 43 OS=Caenorhabditis elegans
GN=bath-43 PE=3 SV=2
Length = 451
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 61/144 (42%), Gaps = 12/144 (8%)
Query: 17 DYSLKIESFKLLSKSTVESFESGVFKSGG---YNWKLVFYPNGKKNDGGKDHLSLYLKID 73
+Y I +F + E +S F +G W L P G ++ +D+LSLYL +
Sbjct: 97 NYMWTINNFSFCREEMGEVLKSSTFSAGCNDKLKWCLRINPKGL-DEESRDYLSLYLLLV 155
Query: 74 DSNPHPDGTWNVNVYYKLFVYDQVSNQYLVVQDAKAPMRRFDRRKTDWGFGKFLDLATFN 133
N V +K + + + ++ +A RF + K DWGF KF+
Sbjct: 156 QCNKS-----EVRAKFKFSILNAKREETKAMESQRA--YRFVQGK-DWGFKKFIRRDFLL 207
Query: 134 EPSNGYLVDDTCAFGAEVYVVKPT 157
+ +NG L D + EV VV T
Sbjct: 208 DEANGLLPGDRLSIFCEVSVVAET 231
>sp|Q54FG0|Y0883_DICDI TNF receptor-associated factor family protein DDB_G0290883
OS=Dictyostelium discoideum GN=DDB_G0290883 PE=3 SV=1
Length = 460
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 63/129 (48%), Gaps = 20/129 (15%)
Query: 29 SKSTVESFESGVFKSGGYNWKLVFYPNGKKNDGGKDHLSLYLKIDDSNPHPDGTWNVNVY 88
SK +S S + +++++ YP G D K+++SLYL++++ P+ + V
Sbjct: 336 SKLNCKSLSSPILLILSHHFQVCVYPKG---DENKEYISLYLRVNNI-EEPNS---LKVE 388
Query: 89 YKLFVYDQVSNQYLVVQDAKAPMRRFDR----RKTDWGFGKFLDLATFNEPSNGYLVDDT 144
Y + + V+ +K+ +R D+ +WG+GKFL L+ NG+L +D
Sbjct: 389 YSFTLVN-------VLDKSKSITKRVDKIVFISPKEWGWGKFL-LSDLINKENGWLSNDD 440
Query: 145 CAFGAEVYV 153
E+Y+
Sbjct: 441 -KLTIEIYI 448
>sp|Q86AY4|Y2340_DICDI TNF receptor-associated factor family protein DDB_G0272340
OS=Dictyostelium discoideum GN=DDB_G0272340 PE=3 SV=2
Length = 449
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 35 SFESGVFKSGGYNWKLVFYPNGKKNDGGKDHLSLYL-KIDDSNP 77
S ES F G +K+ FYPNG +D KD LS+YL K DD P
Sbjct: 333 SIESPEFMVGNLKFKIQFYPNGGLSDESKDFLSIYLYKFDDQTP 376
>sp|Q9M8J9|BPM2_ARATH BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis
thaliana GN=BPM2 PE=1 SV=1
Length = 406
Score = 40.8 bits (94), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 14/144 (9%)
Query: 18 YSLKIESFKLLSKSTVESF-ESGVFKSGGYNWKLVFYPNGKKNDGGKDHLSLYLKIDDSN 76
+ KI + L+ + + S F GGY+W + FYP+GK + ++SL++ +
Sbjct: 35 HEFKISGYSLVKGMGIGKYVASDTFMVGGYSWAIYFYPDGKSPEDNSVYVSLFIALASEG 94
Query: 77 PHPDGTWNVNVYYKLFVYDQVSNQYLVVQD-----AKAPMRRFDRRKTDWGFGKFLDLAT 131
+V ++L + DQ N+ V ++ R + WG+ +F +
Sbjct: 95 A------DVRALFELTLVDQSGNERHKVHSHFGRTLESGPYTLKYRGSMWGYKRFFKRSL 148
Query: 132 FNEPSNGYLVDDTCAFGAEVYVVK 155
S+ YL D+ V VVK
Sbjct: 149 LE--SSDYLKDNGLLVRCCVGVVK 170
>sp|P50101|UBP15_YEAST Ubiquitin carboxyl-terminal hydrolase 15 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=UBP15 PE=1
SV=1
Length = 1230
Score = 40.4 bits (93), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 55/141 (39%), Gaps = 30/141 (21%)
Query: 36 FESGVFKSGGYNWKLVFYPNGKKNDGGKDHLSLYLKIDDSNPHP--------------DG 81
+ S F+ G + W ++ +P G N G +++YL+ PHP D
Sbjct: 57 YNSPRFRIGDFEWDILLFPQGNHNKG----VAVYLE-----PHPEEKLDETTGEMVPVDP 107
Query: 82 TWNVNVYYKLFVYDQVSNQYLVVQDAKAPMRRFDRRKTDWGFGKFLDLATFNEPSNG--- 138
W + + + + + RF+ TDWGF +DL PS G
Sbjct: 108 DWYCCAQFAIGISRPGNGD--TINLINKSHHRFNALDTDWGFANLIDLNNLKHPSKGRPL 165
Query: 139 -YLVDDTCAFGAEVYVVK-PT 157
+L + T A V ++K PT
Sbjct: 166 SFLNEGTLNITAYVRILKDPT 186
Score = 31.2 bits (69), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 154 VKPTDSEEILSLVSDPADGNYRFNIPAFGSVGDTVQRSSEFTVGERNWQLVVYPAGS 210
+ P EE+ +L+ D ++ +NIP + + + S F +G+ W ++++P G+
Sbjct: 26 ILPQFDEEVETLLED----SFTWNIPDWNELTNPKYNSPRFRIGDFEWDILLFPQGN 78
>sp|Q8L765|BPM1_ARATH BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis
thaliana GN=BPM1 PE=1 SV=1
Length = 407
Score = 40.0 bits (92), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 17/125 (13%)
Query: 38 SGVFKSGGYNWKLVFYPNGKKNDGGKDHLSLYLKIDDSNPHPDGTWNVNVYYKLFVYDQV 97
S F GGY+W + FYP+GK + ++SL++ + +V ++L + DQ
Sbjct: 57 SDTFMVGGYSWAIYFYPDGKSPEDNSSYVSLFIALASEGA------DVRALFELTLVDQS 110
Query: 98 SNQYLVVQDAKAPMRRFDR-------RKTDWGFGKFLDLATFNEPSNGYLVDDTCAFGAE 150
N V R D R + WG+ +F ++ S+ YL +++
Sbjct: 111 GNGKHKVHSHFG--RALDSGPYTLKYRGSMWGYKRFFRRSSLE--SSDYLKENSLLVRCR 166
Query: 151 VYVVK 155
V VVK
Sbjct: 167 VGVVK 171
>sp|Q9SRV1|BPM4_ARATH BTB/POZ and MATH domain-containing protein 4 OS=Arabidopsis
thaliana GN=BPM4 PE=1 SV=1
Length = 465
Score = 39.3 bits (90), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 52/128 (40%), Gaps = 25/128 (19%)
Query: 38 SGVFKSGGYNWKLVFYPNGKKNDGGKDHLSLYLKIDDSNPHPDGTWNVNVYYKLFVYDQV 97
S F GGY W + FYP+GK + ++S+++ + DGT +V ++L + DQ
Sbjct: 70 SDTFTVGGYQWAIYFYPDGKNPEDNSAYVSVFIAL-----ASDGT-DVRALFELSLLDQS 123
Query: 98 SNQYLVVQDAKAPMRRFDR-----------RKTDWGFGKFLDLATFNEPSNGYLVDDTCA 146
V FDR R + WG+ +F ++ +L DD
Sbjct: 124 GKGKHKVHS------HFDRALESGPYTLKYRGSMWGYKRFFRRLMLE--TSDFLKDDCLK 175
Query: 147 FGAEVYVV 154
V VV
Sbjct: 176 INCTVGVV 183
>sp|Q1EBV6|BPM5_ARATH BTB/POZ and MATH domain-containing protein 5 OS=Arabidopsis
thaliana GN=BPM5 PE=1 SV=1
Length = 410
Score = 37.7 bits (86), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 17/121 (14%)
Query: 41 FKSGGYNWKLVFYPNGKKNDGGKDHLSLYLKIDDSNPHPDGTWNVNVYYKLFVYDQ---- 96
F GGY W + FYP+GK + ++S+++ + +GT V ++L + DQ
Sbjct: 55 FSVGGYQWGIFFYPDGKNPEDNSSYVSVFIALAS-----EGT-EVRALFELALVDQSGKG 108
Query: 97 ---VSNQYLVVQDAKAPMRRFDRRKTDWGFGKFLDLATFNEPSNGYLVDDTCAFGAEVYV 153
V + + D ++ R + WG+ +F + ++ YL DD V V
Sbjct: 109 KHKVHSHFERSLDGGPYTLKY--RGSMWGYKRFFRRSILE--TSDYLKDDCLIINCTVGV 164
Query: 154 V 154
V
Sbjct: 165 V 165
>sp|Q717B3|TDPZ1_MOUSE TD and POZ domain-containing protein 1 OS=Mus musculus GN=Tdpoz1
PE=2 SV=2
Length = 365
Score = 37.0 bits (84), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 10/79 (12%)
Query: 174 YRFNIPAFGSVGDTVQR--SSEFTVGERN----WQLVVYPAGSGADRGNFLTVSLKLADY 227
Y++ I F +QR +S E N W L VYP G+ + ++L+V L L +
Sbjct: 22 YKWTISNFSFCMGGIQRRITSPVFSSEENKEVAWCLRVYPKGADKESKDYLSVYLVLLSH 81
Query: 228 QTVSRKKPVYAEFKFKIPN 246
+ PV+A+FKF I N
Sbjct: 82 ----LQSPVWAKFKFWIIN 96
>sp|A1L4W5|BPM6_ARATH BTB/POZ and MATH domain-containing protein 6 OS=Arabidopsis
thaliana GN=BPM6 PE=1 SV=1
Length = 415
Score = 37.0 bits (84), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 66/160 (41%), Gaps = 25/160 (15%)
Query: 41 FKSGGYNWKLVFYPNGKKNDGGKDHLSLYLKIDDSNPHPDGTWNVNVYYKLFVYDQ---- 96
F GGY W + YP+GK + ++S+++ + V ++L + DQ
Sbjct: 62 FSVGGYQWTIFVYPDGKNPEDNSSYVSVFIVL------ASECTEVRALFELSLVDQSGKG 115
Query: 97 ---VSNQYLVVQDAKAPMRRFDRRKTDWGFGKFLDLATFNEPSNGYLVDDTCAFGAEV-Y 152
V + + D ++ R + WG+ +F + ++ YL DD V
Sbjct: 116 KHKVHSHFNRSLDGGPYTLKY--RGSMWGYKRFFRRSLLE--TSDYLKDDCLKINCTVGV 171
Query: 153 VVKPTDSEEILSL-VSDPADGNYRFNIPAFGSVGDTVQRS 191
VV +LS+ V D G++ FG + DT+Q S
Sbjct: 172 VVSEMHCPRLLSIHVPDSELGSH------FGKLLDTLQGS 205
>sp|Q86KX6|Y2348_DICDI TNF receptor-associated factor family protein DDB_G0272348
OS=Dictyostelium discoideum GN=DDB_G0272348 PE=3 SV=2
Length = 595
Score = 36.6 bits (83), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 21/135 (15%)
Query: 36 FESGVFKSGGYNWKLVFYPNGKKNDGGKDHLSLYL-KIDDSNPHPDGTWNVNVYYKLFVY 94
+S +FK G + L ++P GKK ++ S++L K D D + VN YY V
Sbjct: 479 IKSPLFKIGNSTFFLKWFPFGKK---KLNYCSIFLYKTQD-----DKSIIVN-YYIHLVN 529
Query: 95 DQVSNQYLVVQDAKAPMRRFDRRKTDWGFG--KFLDLATFNEPSNGYLVDDTCAFGAEVY 152
+Q+S++ K +++D G+G +F+ A +NG+L++D+ E++
Sbjct: 530 NQISDEVY----EKRGCQKYDSENGSAGYGSSQFIKRADLLNDANGFLINDSITIEIEIF 585
Query: 153 VVKPTDSEEILSLVS 167
+EEIL L S
Sbjct: 586 A-----TEEILPLQS 595
>sp|Q717B2|TDPZ2_MOUSE TD and POZ domain-containing protein 2 OS=Mus musculus GN=Tdpoz2
PE=2 SV=2
Length = 364
Score = 36.2 bits (82), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 9/107 (8%)
Query: 48 WKLVFYPNGKKNDGGKDHLSLYLKIDDSNPHPDGTWNVNVYYKLFVYDQVSNQYLVVQDA 107
W L +PNG ++ KD+LS+YL + + V ++ ++ + +Y Q
Sbjct: 55 WCLRVHPNGF-DEESKDYLSVYLVLVNCPKR-----QVRAKFEFWIKNSQGEKYQYTQSL 108
Query: 108 KAPMRRFDRRKTDWGFGKFLDLATFNEPSNGYLVDDTCAFGAEVYVV 154
P + RK +WGF KF+ + N L D +V +V
Sbjct: 109 NVPSFQ---RKQNWGFSKFILRDSLLSHRNWLLPKDKLTLCCKVSIV 152
>sp|P11467|DG17_DICDI RING finger protein DG17 OS=Dictyostelium discoideum GN=zfaA PE=2
SV=2
Length = 460
Score = 36.2 bits (82), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 62/129 (48%), Gaps = 20/129 (15%)
Query: 29 SKSTVESFESGVFKSGGYNWKLVFYPNGKKNDGGKDHLSLYLKIDDSNPHPDGTWNVNVY 88
SK ++ S + + +++ YP G D K+++SLYL++++ P+ + V
Sbjct: 336 SKLNCQALSSPMLSILSHLFQVCVYPKG---DENKEYISLYLRVNNI-EEPNS---LKVE 388
Query: 89 YKLFVYDQVSNQYLVVQDAKAPMRRFDRR----KTDWGFGKFLDLATFNEPSNGYLVDDT 144
Y + + V+ +K+ ++ D++ WG+GKFL L+ NG+L +D
Sbjct: 389 YSFTLVN-------VLDKSKSITKKEDKKVFISSEGWGWGKFL-LSDLINKENGWLSNDD 440
Query: 145 CAFGAEVYV 153
E+Y+
Sbjct: 441 -KLIIEIYI 448
>sp|Q60MK8|UBP7_CAEBR Ubiquitin carboxyl-terminal hydrolase 7 OS=Caenorhabditis briggsae
GN=usp-7 PE=3 SV=1
Length = 1129
Score = 34.7 bits (78), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Query: 114 FDRRKTDWGFGKFLDLATFNEPSNGYLVDDT----CAFGAEV 151
F + DWGF + T P +GY++DD C F A+V
Sbjct: 132 FHNTEVDWGFSNYDQYDTLTSPKDGYVIDDVIRLRCRFTADV 173
>sp|Q6U7I1|UBP7_CHICK Ubiquitin carboxyl-terminal hydrolase 7 OS=Gallus gallus GN=USP7
PE=2 SV=1
Length = 1101
Score = 34.7 bits (78), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 56/142 (39%), Gaps = 19/142 (13%)
Query: 16 ADYSLKIESFKLLSKSTVESFESGVFKSGGYNWKLVFYPNGKKNDGGKDHLSLYLKIDDS 75
A + +E F LS+S + S WK++ P + + + +L+ +
Sbjct: 69 ATFQFTVERFNRLSESVL----SPPCFVRNLPWKIMVMPRLYPDRPHQKSVGFFLQCNAE 124
Query: 76 NPHPDGTWNVNVYYKLFVYDQVSNQYLVVQDAKAPMRR----FDRRKTDWGFGKFLDLAT 131
+ + + K+ Y D K+ RR F ++ DWGF F+ +
Sbjct: 125 SDSTSWSCHAQAVLKIINYKD---------DEKSFSRRISHLFFHKENDWGFSNFMAWSE 175
Query: 132 FNEPSNGYLVDDTCAFGAEVYV 153
+P G++ +D F EVYV
Sbjct: 176 VTDPEKGFIEEDKVTF--EVYV 195
>sp|Q7JKC3|UBP7_CAEEL Ubiquitin carboxyl-terminal hydrolase 7 OS=Caenorhabditis elegans
GN=usp-7 PE=2 SV=1
Length = 1135
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Query: 114 FDRRKTDWGFGKFLDLATFNEPSNGYLVDDT----CAFGAEV 151
F + DWGF + T P +GY+V+DT C F A+V
Sbjct: 135 FHNTEVDWGFSNYDQYDTLCNPKDGYVVNDTIKLRCRFTADV 176
>sp|Q93009|UBP7_HUMAN Ubiquitin carboxyl-terminal hydrolase 7 OS=Homo sapiens GN=USP7
PE=1 SV=2
Length = 1102
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 56/142 (39%), Gaps = 19/142 (13%)
Query: 16 ADYSLKIESFKLLSKSTVESFESGVFKSGGYNWKLVFYPNGKKNDGGKDHLSLYLKIDDS 75
A + +E F LS+S + S WK++ P + + + +L+ +
Sbjct: 69 ATFQFTVERFSRLSESVL----SPPCFVRNLPWKIMVMPRFYPDRPHQKSVGFFLQCNAE 124
Query: 76 NPHPDGTWNVNVYYKLFVYDQVSNQYLVVQDAKAPMRR----FDRRKTDWGFGKFLDLAT 131
+ + + K+ Y D K+ RR F ++ DWGF F+ +
Sbjct: 125 SDSTSWSCHAQAVLKIINYRD---------DEKSFSRRISHLFFHKENDWGFSNFMAWSE 175
Query: 132 FNEPSNGYLVDDTCAFGAEVYV 153
+P G++ DD F EV+V
Sbjct: 176 VTDPEKGFIDDDKVTF--EVFV 195
>sp|Q4VSI4|UBP7_RAT Ubiquitin carboxyl-terminal hydrolase 7 OS=Rattus norvegicus
GN=Usp7 PE=1 SV=1
Length = 1103
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 56/142 (39%), Gaps = 19/142 (13%)
Query: 16 ADYSLKIESFKLLSKSTVESFESGVFKSGGYNWKLVFYPNGKKNDGGKDHLSLYLKIDDS 75
A + +E F LS+S + S WK++ P + + + +L+ +
Sbjct: 70 ATFQFTVERFSRLSESVL----SPPCFVRNLPWKIMVMPRFYPDRPHQKSVGFFLQCNAE 125
Query: 76 NPHPDGTWNVNVYYKLFVYDQVSNQYLVVQDAKAPMRR----FDRRKTDWGFGKFLDLAT 131
+ + + K+ Y D K+ RR F ++ DWGF F+ +
Sbjct: 126 SDSTSWSCHAQAVLKIINYRD---------DDKSFSRRISHLFFHKENDWGFSNFMAWSE 176
Query: 132 FNEPSNGYLVDDTCAFGAEVYV 153
+P G++ DD F EV+V
Sbjct: 177 VTDPEKGFIDDDKVTF--EVFV 196
>sp|Q6IQ16|SPOPL_HUMAN Speckle-type POZ protein-like OS=Homo sapiens GN=SPOPL PE=2 SV=1
Length = 392
Score = 32.7 bits (73), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 61/141 (43%), Gaps = 12/141 (8%)
Query: 18 YSLKIESFKLLSKSTVESFESGVFKSG---GYNWKLVFYPNGKKNDGGKDHLSLYLKIDD 74
Y I +F + E +S F SG W L P G +D KD+LSLYL +
Sbjct: 34 YMWTINNFSFCREEMGEVLKSSTFSSGPSDKMKWCLRVNPKGL-DDESKDYLSLYLLLVS 92
Query: 75 SNPHPDGTWNVNVYYKLFVYDQVSNQYLVVQDAKAPMRRFDRRKTDWGFGKFLDLATFNE 134
P + V +K + + + ++ +A RF + K DWGF KF+ +
Sbjct: 93 C-PKSE----VRAKFKFSLLNAKREETKAMESQRA--YRFVQGK-DWGFKKFIRRDFLLD 144
Query: 135 PSNGYLVDDTCAFGAEVYVVK 155
+NG L DD EV VV+
Sbjct: 145 EANGLLPDDKLTLFCEVSVVQ 165
>sp|Q6A4J8|UBP7_MOUSE Ubiquitin carboxyl-terminal hydrolase 7 OS=Mus musculus GN=Usp7
PE=1 SV=1
Length = 1103
Score = 32.3 bits (72), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 55/142 (38%), Gaps = 19/142 (13%)
Query: 16 ADYSLKIESFKLLSKSTVESFESGVFKSGGYNWKLVFYPNGKKNDGGKDHLSLYLKIDDS 75
A + +E F LS+S + S WK++ P + + + +L+ +
Sbjct: 70 ATFQFTVERFSRLSESVL----SPPCFVRNLPWKIMVMPRFYPDRPHQKSVGFFLQCNAE 125
Query: 76 NPHPDGTWNVNVYYKLFVYDQVSNQYLVVQDAKAPMRR----FDRRKTDWGFGKFLDLAT 131
+ + + K+ Y D K+ RR F + DWGF F+ +
Sbjct: 126 SDSTSWSCHAQAVLKIINYRD---------DDKSFSRRISHLFFHEENDWGFSNFMAWSE 176
Query: 132 FNEPSNGYLVDDTCAFGAEVYV 153
+P G++ DD F EV+V
Sbjct: 177 VTDPEKGFIDDDKVTF--EVFV 196
>sp|Q2M2N2|SPOPL_MOUSE Speckle-type POZ protein-like OS=Mus musculus GN=Spopl PE=2 SV=3
Length = 392
Score = 32.3 bits (72), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 61/141 (43%), Gaps = 12/141 (8%)
Query: 18 YSLKIESFKLLSKSTVESFESGVFKSG---GYNWKLVFYPNGKKNDGGKDHLSLYLKIDD 74
Y I +F + E +S F SG W L P G +D KD+LSLYL +
Sbjct: 34 YMWTINNFSFCREEMGEVLKSSTFSSGPNDKMKWCLRVNPKGL-DDESKDYLSLYLLLVS 92
Query: 75 SNPHPDGTWNVNVYYKLFVYDQVSNQYLVVQDAKAPMRRFDRRKTDWGFGKFLDLATFNE 134
P + V +K + + + ++ +A RF + K DWGF KF+ +
Sbjct: 93 C-PKSE----VRAKFKFSLLNDKREETKAMESQRA--YRFVQGK-DWGFKKFIRRDFLLD 144
Query: 135 PSNGYLVDDTCAFGAEVYVVK 155
+NG L DD EV VV+
Sbjct: 145 EANGLLPDDKLTLFCEVSVVQ 165
>sp|Q5BL35|SPOLA_DANRE Speckle-type POZ protein-like A OS=Danio rerio GN=spopla PE=2 SV=1
Length = 392
Score = 32.3 bits (72), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 61/141 (43%), Gaps = 12/141 (8%)
Query: 18 YSLKIESFKLLSKSTVESFESGVFKSG---GYNWKLVFYPNGKKNDGGKDHLSLYLKIDD 74
Y I +F + E +S F SG W L P G +D KD+LSLYL +
Sbjct: 34 YMWTINNFSFCREEMGEVLKSSTFSSGPNDKMKWCLRVNPKGL-DDESKDYLSLYLLLVS 92
Query: 75 SNPHPDGTWNVNVYYKLFVYDQVSNQYLVVQDAKAPMRRFDRRKTDWGFGKFLDLATFNE 134
P + V +K + + + ++ +A RF + K DWGF KF+ +
Sbjct: 93 C-PKSE----VRAKFKFSLLNAKREETKAMESQRA--YRFVQGK-DWGFKKFIRRDFLLD 144
Query: 135 PSNGYLVDDTCAFGAEVYVVK 155
+NG L DD EV VV+
Sbjct: 145 EANGLLPDDKLTLFCEVSVVQ 165
>sp|Q6GR09|SPOPL_XENLA Speckle-type POZ protein-like OS=Xenopus laevis GN=spopl PE=2 SV=1
Length = 392
Score = 32.3 bits (72), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 62/141 (43%), Gaps = 12/141 (8%)
Query: 18 YSLKIESFKLLSKSTVESFESGVFKSG---GYNWKLVFYPNGKKNDGGKDHLSLYLKIDD 74
Y I +F + T E +S F SG W L P G +D KD+LSLYL +
Sbjct: 34 YMWTINNFSFCREETGEVLKSSSFSSGPNDKLKWCLRVNPKGL-DDESKDYLSLYLLLVS 92
Query: 75 SNPHPDGTWNVNVYYKLFVYDQVSNQYLVVQDAKAPMRRFDRRKTDWGFGKFLDLATFNE 134
+ V +K + + + + ++ +A RF + K DWGF K++ +
Sbjct: 93 CPKN-----EVRAKFKFSLLNSKNEETKAMESQRA--YRFVQGK-DWGFKKYIRRDFLLD 144
Query: 135 PSNGYLVDDTCAFGAEVYVVK 155
+NG L DD EV VV+
Sbjct: 145 EANGLLPDDKLTLYCEVSVVQ 165
>sp|Q6PCX9|TRI37_MOUSE E3 ubiquitin-protein ligase TRIM37 OS=Mus musculus GN=Trim37 PE=2
SV=1
Length = 961
Score = 32.0 bits (71), Expect = 4.2, Method: Composition-based stats.
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 201 WQLVVYPAGSGADRGNFLTVSLKLA 225
W+L VYP G+G RG +L+V L+L+
Sbjct: 308 WRLKVYPDGNGVVRGYYLSVFLELS 332
>sp|O94972|TRI37_HUMAN E3 ubiquitin-protein ligase TRIM37 OS=Homo sapiens GN=TRIM37 PE=1
SV=2
Length = 964
Score = 32.0 bits (71), Expect = 4.3, Method: Composition-based stats.
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 201 WQLVVYPAGSGADRGNFLTVSLKLA 225
W+L VYP G+G RG +L+V L+L+
Sbjct: 308 WRLKVYPDGNGVVRGYYLSVFLELS 332
>sp|Q6P8B3|SPOP_XENTR Speckle-type POZ protein OS=Xenopus tropicalis GN=spop PE=2 SV=1
Length = 374
Score = 32.0 bits (71), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 61/141 (43%), Gaps = 12/141 (8%)
Query: 18 YSLKIESFKLLSKSTVESFESGVFKSGG---YNWKLVFYPNGKKNDGGKDHLSLYLKIDD 74
Y I +F + E +S F SG W L P G ++ KD+LSLYL +
Sbjct: 34 YMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGL-DEESKDYLSLYLLLVS 92
Query: 75 SNPHPDGTWNVNVYYKLFVYDQVSNQYLVVQDAKAPMRRFDRRKTDWGFGKFLDLATFNE 134
P + V +K + + + ++ +A RF + K DWGF KF+ +
Sbjct: 93 C-PKSE----VRAKFKFSILNAKGEETKAMESQRA--YRFVQGK-DWGFKKFIRRDFLLD 144
Query: 135 PSNGYLVDDTCAFGAEVYVVK 155
+NG L DD EV VV+
Sbjct: 145 EANGLLPDDKLTLFCEVSVVQ 165
>sp|Q5NVK7|SPOP_PONAB Speckle-type POZ protein OS=Pongo abelii GN=SPOP PE=1 SV=1
Length = 374
Score = 32.0 bits (71), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 61/141 (43%), Gaps = 12/141 (8%)
Query: 18 YSLKIESFKLLSKSTVESFESGVFKSGG---YNWKLVFYPNGKKNDGGKDHLSLYLKIDD 74
Y I +F + E +S F SG W L P G ++ KD+LSLYL +
Sbjct: 34 YMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGL-DEESKDYLSLYLLLVS 92
Query: 75 SNPHPDGTWNVNVYYKLFVYDQVSNQYLVVQDAKAPMRRFDRRKTDWGFGKFLDLATFNE 134
P + V +K + + + ++ +A RF + K DWGF KF+ +
Sbjct: 93 C-PKSE----VRAKFKFSILNAKGEETKAMESQRA--YRFVQGK-DWGFKKFIRRDFLLD 144
Query: 135 PSNGYLVDDTCAFGAEVYVVK 155
+NG L DD EV VV+
Sbjct: 145 EANGLLPDDKLTLFCEVSVVQ 165
>sp|Q6ZWS8|SPOP_MOUSE Speckle-type POZ protein OS=Mus musculus GN=Spop PE=1 SV=1
Length = 374
Score = 32.0 bits (71), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 61/141 (43%), Gaps = 12/141 (8%)
Query: 18 YSLKIESFKLLSKSTVESFESGVFKSGG---YNWKLVFYPNGKKNDGGKDHLSLYLKIDD 74
Y I +F + E +S F SG W L P G ++ KD+LSLYL +
Sbjct: 34 YMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGL-DEESKDYLSLYLLLVS 92
Query: 75 SNPHPDGTWNVNVYYKLFVYDQVSNQYLVVQDAKAPMRRFDRRKTDWGFGKFLDLATFNE 134
P + V +K + + + ++ +A RF + K DWGF KF+ +
Sbjct: 93 C-PKSE----VRAKFKFSILNAKGEETKAMESQRA--YRFVQGK-DWGFKKFIRRDFLLD 144
Query: 135 PSNGYLVDDTCAFGAEVYVVK 155
+NG L DD EV VV+
Sbjct: 145 EANGLLPDDKLTLFCEVSVVQ 165
>sp|O43791|SPOP_HUMAN Speckle-type POZ protein OS=Homo sapiens GN=SPOP PE=1 SV=1
Length = 374
Score = 32.0 bits (71), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 61/141 (43%), Gaps = 12/141 (8%)
Query: 18 YSLKIESFKLLSKSTVESFESGVFKSGG---YNWKLVFYPNGKKNDGGKDHLSLYLKIDD 74
Y I +F + E +S F SG W L P G ++ KD+LSLYL +
Sbjct: 34 YMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGL-DEESKDYLSLYLLLVS 92
Query: 75 SNPHPDGTWNVNVYYKLFVYDQVSNQYLVVQDAKAPMRRFDRRKTDWGFGKFLDLATFNE 134
P + V +K + + + ++ +A RF + K DWGF KF+ +
Sbjct: 93 C-PKSE----VRAKFKFSILNAKGEETKAMESQRA--YRFVQGK-DWGFKKFIRRDFLLD 144
Query: 135 PSNGYLVDDTCAFGAEVYVVK 155
+NG L DD EV VV+
Sbjct: 145 EANGLLPDDKLTLFCEVSVVQ 165
>sp|Q0VCW1|SPOP_BOVIN Speckle-type POZ protein OS=Bos taurus GN=SPOP PE=2 SV=1
Length = 374
Score = 32.0 bits (71), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 61/141 (43%), Gaps = 12/141 (8%)
Query: 18 YSLKIESFKLLSKSTVESFESGVFKSGG---YNWKLVFYPNGKKNDGGKDHLSLYLKIDD 74
Y I +F + E +S F SG W L P G ++ KD+LSLYL +
Sbjct: 34 YMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGL-DEESKDYLSLYLLLVS 92
Query: 75 SNPHPDGTWNVNVYYKLFVYDQVSNQYLVVQDAKAPMRRFDRRKTDWGFGKFLDLATFNE 134
P + V +K + + + ++ +A RF + K DWGF KF+ +
Sbjct: 93 C-PKSE----VRAKFKFSILNAKGEETKAMESQRA--YRFVQGK-DWGFKKFIRRDFLLD 144
Query: 135 PSNGYLVDDTCAFGAEVYVVK 155
+NG L DD EV VV+
Sbjct: 145 EANGLLPDDKLTLFCEVSVVQ 165
>sp|Q7ZX06|SPOPA_XENLA Speckle-type POZ protein A OS=Xenopus laevis GN=spop-a PE=2 SV=1
Length = 374
Score = 32.0 bits (71), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 61/141 (43%), Gaps = 12/141 (8%)
Query: 18 YSLKIESFKLLSKSTVESFESGVFKSGG---YNWKLVFYPNGKKNDGGKDHLSLYLKIDD 74
Y I +F + E +S F SG W L P G ++ KD+LSLYL +
Sbjct: 34 YMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGL-DEESKDYLSLYLLLVS 92
Query: 75 SNPHPDGTWNVNVYYKLFVYDQVSNQYLVVQDAKAPMRRFDRRKTDWGFGKFLDLATFNE 134
P + V +K + + + ++ +A RF + K DWGF KF+ +
Sbjct: 93 C-PKSE----VRAKFKFSILNAKGEETKAMESQRA--YRFVQGK-DWGFKKFIRRDFLLD 144
Query: 135 PSNGYLVDDTCAFGAEVYVVK 155
+NG L DD EV VV+
Sbjct: 145 EANGLLPDDKLTLFCEVSVVQ 165
>sp|Q7T330|SPOP_DANRE Speckle-type POZ protein OS=Danio rerio GN=spop PE=2 SV=1
Length = 374
Score = 32.0 bits (71), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 61/141 (43%), Gaps = 12/141 (8%)
Query: 18 YSLKIESFKLLSKSTVESFESGVFKSGG---YNWKLVFYPNGKKNDGGKDHLSLYLKIDD 74
Y I +F + E +S F SG W L P G ++ KD+LSLYL +
Sbjct: 34 YMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGL-DEESKDYLSLYLLLVS 92
Query: 75 SNPHPDGTWNVNVYYKLFVYDQVSNQYLVVQDAKAPMRRFDRRKTDWGFGKFLDLATFNE 134
P + V +K + + + ++ +A RF + K DWGF KF+ +
Sbjct: 93 C-PKSE----VRAKFKFSILNAKGEETKAMESQRA--YRFVQGK-DWGFKKFIRRDFLLD 144
Query: 135 PSNGYLVDDTCAFGAEVYVVK 155
+NG L DD EV VV+
Sbjct: 145 EANGLLPDDKLTLFCEVSVVQ 165
>sp|Q0IHH9|SPOPB_XENLA Speckle-type POZ protein B OS=Xenopus laevis GN=spop-b PE=2 SV=1
Length = 374
Score = 32.0 bits (71), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 61/141 (43%), Gaps = 12/141 (8%)
Query: 18 YSLKIESFKLLSKSTVESFESGVFKSGG---YNWKLVFYPNGKKNDGGKDHLSLYLKIDD 74
Y I +F + E +S F SG W L P G ++ KD+LSLYL +
Sbjct: 34 YMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGL-DEESKDYLSLYLLLVS 92
Query: 75 SNPHPDGTWNVNVYYKLFVYDQVSNQYLVVQDAKAPMRRFDRRKTDWGFGKFLDLATFNE 134
P + V +K + + + ++ +A RF + K DWGF KF+ +
Sbjct: 93 C-PKSE----VRAKFKFSILNAKGEETKAMESQRA--YRFVQGK-DWGFKKFIRRDFLLD 144
Query: 135 PSNGYLVDDTCAFGAEVYVVK 155
+NG L DD EV VV+
Sbjct: 145 EANGLLPDDKLTLFCEVSVVQ 165
>sp|Q4J8I5|HIS5_SULAC Imidazole glycerol phosphate synthase subunit HisH OS=Sulfolobus
acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 /
NBRC 15157 / NCIMB 11770) GN=hisH PE=3 SV=1
Length = 199
Score = 31.6 bits (70), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 8/62 (12%)
Query: 127 LDLATFNEPSNGYLVDDTCAFGAEVYVVKPTDSEEILSLVSDPADGNYRFNIPAFGSVGD 186
+++ +NE S G +DD + A YV PTD ILS S Y + PA ++G+
Sbjct: 120 VNVIKYNELSEG--IDDQYVYYAHSYVAYPTDKSVILSTTS------YGIDYPAVVNIGN 171
Query: 187 TV 188
V
Sbjct: 172 IV 173
>sp|A0JMG1|SPOLB_DANRE Speckle-type POZ protein-like B OS=Danio rerio GN=spoplb PE=2 SV=2
Length = 392
Score = 31.6 bits (70), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 60/141 (42%), Gaps = 12/141 (8%)
Query: 18 YSLKIESFKLLSKSTVESFESGVFKSG---GYNWKLVFYPNGKKNDGGKDHLSLYLKIDD 74
Y I +F + E S F SG W L P G +D KD+LSLYL +
Sbjct: 34 YMWTINNFSFCREEMGEVVRSSTFSSGPNDKMKWCLRVNPKGL-DDESKDYLSLYLLLVS 92
Query: 75 SNPHPDGTWNVNVYYKLFVYDQVSNQYLVVQDAKAPMRRFDRRKTDWGFGKFLDLATFNE 134
P + V +K + + + ++ +A RF + K DWGF KF+ +
Sbjct: 93 C-PKSE----VRAKFKFSLLNAKREETKAMESQRA--YRFVQGK-DWGFKKFIRRDFLLD 144
Query: 135 PSNGYLVDDTCAFGAEVYVVK 155
+NG L DD EV VV+
Sbjct: 145 EANGLLPDDKLTLFCEVSVVQ 165
>sp|Q9VFP2|RDX_DROME Protein roadkill OS=Drosophila melanogaster GN=rdx PE=1 SV=2
Length = 829
Score = 31.2 bits (69), Expect = 8.1, Method: Composition-based stats.
Identities = 39/140 (27%), Positives = 60/140 (42%), Gaps = 12/140 (8%)
Query: 18 YSLKIESFKLLSKSTVESFESGVFKSGGYN---WKLVFYPNGKKNDGGKDHLSLYLKIDD 74
Y I +F + E +S F +G + W L P G ++ KD+LSLYL +
Sbjct: 489 YMWTINNFSFCREEMGEVLKSSTFSAGANDKLKWCLRVNPKGL-DEESKDYLSLYLLLVS 547
Query: 75 SNPHPDGTWNVNVYYKLFVYDQVSNQYLVVQDAKAPMRRFDRRKTDWGFGKFLDLATFNE 134
N V +K + + + ++ +A RF + K DWGF KF+ +
Sbjct: 548 CNKS-----EVRAKFKFSILNAKREETKAMESQRA--YRFVQGK-DWGFKKFIRRDFLLD 599
Query: 135 PSNGYLVDDTCAFGAEVYVV 154
+NG L +D EV VV
Sbjct: 600 EANGLLPEDKLTIFCEVSVV 619
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.136 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105,304,741
Number of Sequences: 539616
Number of extensions: 4682471
Number of successful extensions: 8031
Number of sequences better than 100.0: 46
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 7984
Number of HSP's gapped (non-prelim): 60
length of query: 260
length of database: 191,569,459
effective HSP length: 115
effective length of query: 145
effective length of database: 129,513,619
effective search space: 18779474755
effective search space used: 18779474755
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)