Query 024961
Match_columns 260
No_of_seqs 278 out of 1132
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 17:31:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024961.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024961hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3t92_A Histone acetyltransfera 100.0 9.3E-33 3.2E-37 223.7 9.4 104 111-230 10-121 (121)
2 3p57_P Histone acetyltransfera 100.0 1.3E-29 4.4E-34 202.6 9.3 86 112-213 10-95 (112)
3 3hve_A Gigaxonin; ubiquitin, c 99.5 2E-14 6.9E-19 126.8 7.0 116 3-125 102-224 (256)
4 3i3n_A Kelch-like protein 11; 99.5 5.5E-14 1.9E-18 125.7 8.3 75 3-77 110-184 (279)
5 3htm_A Speckle-type POZ protei 99.4 1.2E-12 4.2E-17 108.0 8.0 71 2-72 102-172 (172)
6 3hqi_A Speckle-type POZ protei 99.3 3.7E-12 1.3E-16 115.2 8.0 71 2-72 242-312 (312)
7 2eqx_A Kelch repeat and BTB do 99.2 2E-11 7E-16 95.1 6.6 91 28-125 4-98 (105)
8 1l3e_B P300 protein; protein-p 98.8 2.1E-09 7.1E-14 84.1 4.7 85 113-208 15-99 (101)
9 4eoz_A Speckle-type POZ protei 98.6 7.2E-09 2.5E-13 82.9 1.7 53 2-54 93-145 (145)
10 2yy9_A Zinc finger and BTB dom 96.3 0.001 3.6E-08 52.8 1.5 34 32-65 87-120 (135)
11 1l3e_B P300 protein; protein-p 96.2 0.0063 2.2E-07 47.2 5.3 51 114-181 47-97 (101)
12 2ast_A S-phase kinase-associat 95.7 0.009 3.1E-07 49.1 4.2 49 3-51 97-148 (159)
13 2p1m_A SKP1-like protein 1A; F 95.6 0.005 1.7E-07 50.9 2.3 47 3-49 96-145 (160)
14 1fs1_B SKP1, cyclin A/CDK2-ass 94.6 0.03 1E-06 45.2 4.2 41 3-43 92-132 (141)
15 2vkp_A BTB/POZ domain-containi 94.4 0.042 1.4E-06 41.1 4.5 32 32-63 77-108 (109)
16 1r29_A B-cell lymphoma 6 prote 91.1 0.2 6.9E-06 38.5 4.0 31 32-62 95-125 (127)
17 3t92_A Histone acetyltransfera 91.0 0.36 1.2E-05 38.3 5.5 51 117-184 39-92 (121)
18 2yy9_A Zinc finger and BTB dom 90.4 0.11 3.8E-06 40.9 2.0 35 2-36 89-123 (135)
19 3b84_A Zinc finger and BTB dom 89.7 0.17 5.9E-06 38.7 2.6 32 32-63 86-117 (119)
20 2q81_A MIZ-1 protein; BTB/POZ 89.1 0.38 1.3E-05 36.7 4.1 30 32-61 88-117 (119)
21 2vpk_A Myoneurin; transcriptio 88.7 0.43 1.5E-05 36.0 4.1 30 32-61 86-115 (116)
22 1buo_A POZ domain, protein (pr 88.2 0.45 1.5E-05 36.3 4.0 28 33-60 90-117 (121)
23 2if5_A Zinc finger and BTB dom 87.6 0.58 2E-05 35.4 4.3 29 32-60 91-119 (120)
24 3v7d_A Suppressor of kinetocho 87.2 0.61 2.1E-05 38.7 4.5 38 3-40 104-141 (169)
25 3htm_A Speckle-type POZ protei 85.5 0.72 2.5E-05 36.8 4.0 33 32-64 100-132 (172)
26 4eoz_A Speckle-type POZ protei 83.4 0.52 1.8E-05 36.5 2.1 33 32-64 91-123 (145)
27 2ppi_A Gigaxonin; BTB domain, 83.4 0.54 1.9E-05 37.3 2.3 29 32-60 115-143 (144)
28 3p57_P Histone acetyltransfera 82.5 1.2 4.1E-05 34.9 3.9 30 182-212 17-46 (112)
29 3ga1_A Nucleus accumbens-assoc 80.8 0.25 8.5E-06 38.2 -0.6 28 33-60 97-124 (129)
30 3hve_A Gigaxonin; ubiquitin, c 78.7 1.4 4.9E-05 37.7 3.5 34 31-64 98-131 (256)
31 2eqx_A Kelch repeat and BTB do 77.5 1.9 6.6E-05 32.4 3.5 30 3-32 11-40 (105)
32 3i3n_A Kelch-like protein 11; 77.4 1.6 5.4E-05 38.0 3.4 41 24-64 96-139 (279)
33 3hqi_A Speckle-type POZ protei 68.5 2.7 9.3E-05 36.9 2.8 33 32-64 240-272 (312)
34 2ihc_A Transcription regulator 64.1 0.33 1.1E-05 37.3 -3.7 29 32-60 94-122 (124)
35 3b0b_B CENP-S, centromere prot 63.0 17 0.00058 28.0 6.0 88 3-91 11-98 (107)
36 3ohu_A Transcription regulator 55.1 0.42 1.4E-05 36.6 -4.5 25 32-56 97-121 (125)
37 2ast_A S-phase kinase-associat 54.1 10 0.00034 30.6 3.5 36 31-66 93-128 (159)
38 1fs1_B SKP1, cyclin A/CDK2-ass 34.0 34 0.0012 26.9 3.6 41 24-66 83-123 (141)
39 2p1m_A SKP1-like protein 1A; F 27.5 37 0.0013 27.2 2.8 44 31-75 92-135 (160)
40 3fkc_A Transcriptional regulat 25.5 25 0.00086 26.2 1.4 22 32-53 93-114 (116)
41 2plx_B Peptide inhibitor; heli 25.1 81 0.0028 17.8 3.0 20 39-58 3-22 (26)
42 3drx_A BTB/POZ domain-containi 22.9 59 0.002 27.7 3.3 26 6-31 88-113 (202)
No 1
>3t92_A Histone acetyltransferase P300 TAZ2-ccaat/enhance protein epsilon; TAZ2 domain, zinc finger, transcription, 300/CBP, C/EBP PROT transferase; HET: TCE TAM; 1.50A {Homo sapiens} PDB: 2k8f_A 2ka6_A 2kje_A 1f81_A
Probab=99.98 E-value=9.3e-33 Score=223.70 Aligned_cols=104 Identities=28% Similarity=0.643 Sum_probs=95.3
Q ss_pred HHHHHHHHHHHHHHhhhCCccCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhcCccCCCCCcchHHHHHHHHHHHhcC
Q 024961 111 YLQLSEAMECLEHICTEGCTSVGPYEVGPTKNRGPCSKFATCQGLQLLIRHFATCKKRVNGGCLRCKRMWQLLRLHSSMC 190 (260)
Q Consensus 111 ~~ql~~am~~L~Ha~~~~C~~~~~~~~~~~~~~~~C~~~~~C~~lk~l~~H~~~C~~r~~ggC~~Ckr~~~Ll~lHa~~C 190 (260)
..+|+++|++|+||++ |+ +++|. +|+|.+||.|++|+.+|+.+.+|||++|+++|+||.+|+++|
T Consensus 10 ~~~iq~~l~~L~HA~~--C~------------~~~C~-~p~C~~mK~ll~H~~~C~~r~~~~c~~C~~~~~Ll~~Hak~C 74 (121)
T 3t92_A 10 RLSIQRAIQSLVHAAQ--CR------------NANCS-LPSCQKMKRVVQHTKGCKRKTNGGCPICKQLIALAAYHAKHC 74 (121)
T ss_dssp HHHHHHHHHHHHHHHH--CC------------CTTCC-CHHHHHHHHHHHHHHHCSSTTTTTCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHcc--Cc------------CCCCC-CchhHHHHHHHHHHHHccCCCCCCCCchHHHHHHHHHHHHhC
Confidence 4679999999999999 98 67899 999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcchhhHHHHhhhh--------cCchhHHHHHHHHHHHhh
Q 024961 191 EQSDSCRVPLCRQFKLKAQLEK--------KGDDGRWRLLVKKVVSAK 230 (260)
Q Consensus 191 ~~~~~C~VP~C~~~k~~~~~~~--------~~~~~~w~llv~~v~~~~ 230 (260)
++++ |+||+|++||++|++++ .++|++|++||+||++||
T Consensus 75 ~~~~-C~VP~C~~iK~~~~~qq~q~~~~~~~~~~~~~~~l~~~~~~~~ 121 (121)
T 3t92_A 75 QENK-CPVPFCLNIKQKLRQQQLEASIDLSAYIESGEEQLLSDLFAVK 121 (121)
T ss_dssp CCTT-CCSTTHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHTC--
T ss_pred CCCC-CCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9986 99999999999999874 358999999999999886
No 2
>3p57_P Histone acetyltransferase P300; protein-DNA complex, transcription factor, transcriptional activation, zinc finger; HET: DNA; 2.19A {Homo sapiens} PDB: 3io2_A
Probab=99.96 E-value=1.3e-29 Score=202.59 Aligned_cols=86 Identities=31% Similarity=0.798 Sum_probs=75.7
Q ss_pred HHHHHHHHHHHHHhhhCCccCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhcCccCCCCCcchHHHHHHHHHHHhcCC
Q 024961 112 LQLSEAMECLEHICTEGCTSVGPYEVGPTKNRGPCSKFATCQGLQLLIRHFATCKKRVNGGCLRCKRMWQLLRLHSSMCE 191 (260)
Q Consensus 112 ~ql~~am~~L~Ha~~~~C~~~~~~~~~~~~~~~~C~~~~~C~~lk~l~~H~~~C~~r~~ggC~~Ckr~~~Ll~lHa~~C~ 191 (260)
.+|++++++|+||++ |+ +++|+ +++|.+||.||+|+++|+.+++|||++|++||+|+++||++|+
T Consensus 10 ~~iq~~l~~L~HA~~--C~------------~~~C~-~~~C~~mK~ll~H~~~C~~r~~~gC~~Ck~~~~Ll~~HAk~C~ 74 (112)
T 3p57_P 10 LSIQRCIQSLVHACQ--CR------------NANCS-LPSCQKMKRVVQHTKGCKRKTNGGCPICKQLIALCCYHAKHCQ 74 (112)
T ss_dssp HHHHHHHHHHHHHHH--CC------------CTTCC-CTTHHHHHHHHTCTTCC-------CCCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHcc--CC------------CCCCC-ChhhHHHHHHHHHHHHccCCCCCCCcccHHHHHHHHHHHHHcC
Confidence 569999999999999 98 78999 9999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcchhhHHHHhhhhc
Q 024961 192 QSDSCRVPLCRQFKLKAQLEKK 213 (260)
Q Consensus 192 ~~~~C~VP~C~~~k~~~~~~~~ 213 (260)
+. +|+||+|++||++|+++++
T Consensus 75 ~~-~C~VP~C~~iK~~~~q~q~ 95 (112)
T 3p57_P 75 EN-KCPVPFCLNIKQKLRQQQL 95 (112)
T ss_dssp ST-TCCSTTHHHHHHHHHHHHH
T ss_pred CC-CCCCCcCHHHHHHHHHHHH
Confidence 96 5999999999999999987
No 3
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.50 E-value=2e-14 Score=126.84 Aligned_cols=116 Identities=12% Similarity=0.145 Sum_probs=89.5
Q ss_pred hHHHHHHHhhhccCchhHHHHHHHHHhhcCCcccHHHHHHHHhhCCChHHHHHHHHHHHHhhhhhhcchhhhHhhhcCch
Q 024961 3 KYGIHLLALSHVYSVPQLKQRCTKGLGERLTIDNVVDVLQLARLCDAPDLYLRCMKLAASRFKAVEKTEGWKFLQDHDPW 82 (260)
Q Consensus 3 ~~v~~LL~AAd~yqI~~LK~~Ce~~L~~~Ls~eN~l~il~lA~~~~a~~Lk~~c~~FI~~nf~~V~~te~f~~L~~~~P~ 82 (260)
+++.+||.+|++|+++.|+..|++||.+.++++||+.++.+|+.|+++.|...|.+||.+||.+|.++++|..|. +.
T Consensus 102 ~~v~~ll~~A~~l~i~~l~~~c~~~L~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~v~~~~~f~~L~---~~ 178 (256)
T 3hve_A 102 DTIQDVVQAADLLLLTDLKTLCCEFLEGCIAAENCIGIRDFALHYCLHHVHYLATEYLETHFRDVSSTEEFLELS---PQ 178 (256)
T ss_dssp CCHHHHHHHHHHHTCHHHHHHHHHHHHHTCCSSTTHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTTCHHHHSSC---HH
T ss_pred hHHHHHHHHHHHHChHHHHHHHHHHHHhhCCHhhHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHhCCcchhcCC---HH
Confidence 689999999999999999999999999999999999999999999999999999999999999999999998863 33
Q ss_pred HHHHHHHh----hHHHHH---hhhhhhhhhhhhhHHHHHHHHHHHHHHHh
Q 024961 83 LELQILQF----MDEAES---RIKRTRRRRQEQGLYLQLSEAMECLEHIC 125 (260)
Q Consensus 83 L~~eil~~----v~~~d~---~~~~~~r~r~e~~v~~ql~~am~~L~Ha~ 125 (260)
...+++.. +...+. ...+|.+++.+.| ....-++|.|+-
T Consensus 179 ~l~~lL~~d~L~v~~E~~v~~av~~W~~~~~~~R----~~~~~~ll~~VR 224 (256)
T 3hve_A 179 KLKEVISLEKLNVGNERYVFEAVIRWIAHDTEIR----KVHMKDVMSALW 224 (256)
T ss_dssp HHHHHHHCC-------CTTHHHHTTTCCC--CCS----TTTHHHHHHHHH
T ss_pred HHHHHHccCCCCCCCHHHHHHHHHHHHHcCHHHH----HHHHHHHHHhCC
Confidence 34444432 111111 4567887775544 222345666664
No 4
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.48 E-value=5.5e-14 Score=125.68 Aligned_cols=75 Identities=23% Similarity=0.331 Sum_probs=72.8
Q ss_pred hHHHHHHHhhhccCchhHHHHHHHHHhhcCCcccHHHHHHHHhhCCChHHHHHHHHHHHHhhhhhhcchhhhHhh
Q 024961 3 KYGIHLLALSHVYSVPQLKQRCTKGLGERLTIDNVVDVLQLARLCDAPDLYLRCMKLAASRFKAVEKTEGWKFLQ 77 (260)
Q Consensus 3 ~~v~~LL~AAd~yqI~~LK~~Ce~~L~~~Ls~eN~l~il~lA~~~~a~~Lk~~c~~FI~~nf~~V~~te~f~~L~ 77 (260)
+++.+||.+|++|+++.|+..|+++|.+.++++||+.++.+|+.|+++.|...|.+||.+||.+|+++++|..|.
T Consensus 110 ~~v~~ll~~A~~l~i~~L~~~c~~~L~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~v~~~~~f~~L~ 184 (279)
T 3i3n_A 110 GSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAHMYTLSQLALKAADMIRRNFHKVIQDEEFYTLP 184 (279)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTHHHHTTSSGGGGSC
T ss_pred HHHHHHHHHHHHHCcHHHHHHHHHHHHHcCCcchHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHhcCcChhcCC
Confidence 689999999999999999999999999999999999999999999999999999999999999999999999863
No 5
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.36 E-value=1.2e-12 Score=108.00 Aligned_cols=71 Identities=28% Similarity=0.426 Sum_probs=61.6
Q ss_pred hhHHHHHHHhhhccCchhHHHHHHHHHhhcCCcccHHHHHHHHhhCCChHHHHHHHHHHHHhhhhhhcchh
Q 024961 2 EKYGIHLLALSHVYSVPQLKQRCTKGLGERLTIDNVVDVLQLARLCDAPDLYLRCMKLAASRFKAVEKTEG 72 (260)
Q Consensus 2 e~~v~~LL~AAd~yqI~~LK~~Ce~~L~~~Ls~eN~l~il~lA~~~~a~~Lk~~c~~FI~~nf~~V~~te~ 72 (260)
.+++.+||.+|++|+++.|+..|+++|.+.++++||+.++.+|+.|+++.|+..|.+||.+||.+|++++|
T Consensus 102 ~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~~~~A~~~~~~~L~~~~~~~i~~~~~~v~~s~~ 172 (172)
T 3htm_A 102 DKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFINYHATDVLETSG 172 (172)
T ss_dssp GGTHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC--------
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHcCCC
Confidence 36899999999999999999999999999999999999999999999999999999999999999998875
No 6
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.30 E-value=3.7e-12 Score=115.18 Aligned_cols=71 Identities=28% Similarity=0.426 Sum_probs=61.6
Q ss_pred hhHHHHHHHhhhccCchhHHHHHHHHHhhcCCcccHHHHHHHHhhCCChHHHHHHHHHHHHhhhhhhcchh
Q 024961 2 EKYGIHLLALSHVYSVPQLKQRCTKGLGERLTIDNVVDVLQLARLCDAPDLYLRCMKLAASRFKAVEKTEG 72 (260)
Q Consensus 2 e~~v~~LL~AAd~yqI~~LK~~Ce~~L~~~Ls~eN~l~il~lA~~~~a~~Lk~~c~~FI~~nf~~V~~te~ 72 (260)
++++.+||.||++|+++.|+..|+++|.+.++++||+.++.+|+.|+++.|+..|.+||..||.+|++++|
T Consensus 242 ~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~~~v~~s~g 312 (312)
T 3hqi_A 242 DKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFINYHATDVLETSG 312 (312)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC--------
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHccCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhCCC
Confidence 36899999999999999999999999999999999999999999999999999999999999999999875
No 7
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.20 E-value=2e-11 Score=95.11 Aligned_cols=91 Identities=18% Similarity=0.149 Sum_probs=68.1
Q ss_pred HhhcCCcccHHHHHHHHhhCCChHHHHHHHHHHHHhhhhhhcchhhhHhhhcCchHHHHHHHhhHHHH----Hhhhhhhh
Q 024961 28 LGERLTIDNVVDVLQLARLCDAPDLYLRCMKLAASRFKAVEKTEGWKFLQDHDPWLELQILQFMDEAE----SRIKRTRR 103 (260)
Q Consensus 28 L~~~Ls~eN~l~il~lA~~~~a~~Lk~~c~~FI~~nf~~V~~te~f~~L~~~~P~L~~eil~~v~~~d----~~~~~~~r 103 (260)
|.+.|+++||++|+.+|+.|++++|...|.+||.+||.+|+++++|..|.. ....+++..=...+ ....+|.+
T Consensus 4 ~~~~L~~~NCl~i~~~A~~~~~~~L~~~a~~fi~~nF~~v~~~~eFl~L~~---~~L~~lL~sdv~~E~~vf~av~~Wv~ 80 (105)
T 2eqx_A 4 GSSGVQVGNCLQVMWLADRHSDPELYTAAKHCAKTHLAQLQNTEEFLHLPH---RLLTDIISDGVPCSQNPTEAIEAWIN 80 (105)
T ss_dssp CCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTCHHHHTSHHHHHSCH---HHHHHHHHTCEETTSCHHHHHHHHHH
T ss_pred hhccCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcccHhhCCH---HHHHHHHcCCCCCHHHHHHHHHHHHH
Confidence 457899999999999999999999999999999999999999999998642 23333333211111 14568988
Q ss_pred hhhhhhHHHHHHHHHHHHHHHh
Q 024961 104 RRQEQGLYLQLSEAMECLEHIC 125 (260)
Q Consensus 104 ~r~e~~v~~ql~~am~~L~Ha~ 125 (260)
++.+.| .+..-++|.|+-
T Consensus 81 ~d~~~R----~~~~~~Ll~~VR 98 (105)
T 2eqx_A 81 FNKEER----EAFAESLRTSLK 98 (105)
T ss_dssp TTHHHH----HHHHHHHHHHCC
T ss_pred cCHHHH----HHHHHHHHHHHH
Confidence 887665 445667777763
No 8
>1l3e_B P300 protein; protein-protein complex, transcription; NMR {Homo sapiens} SCOP: g.53.1.1 PDB: 1p4q_B 1r8u_B 2ka4_A 1l8c_A 1u2n_A 1liq_A
Probab=98.84 E-value=2.1e-09 Score=84.10 Aligned_cols=85 Identities=19% Similarity=0.456 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHHhhhCCccCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhcCccCCCCCcchHHHHHHHHHHHhcCCC
Q 024961 113 QLSEAMECLEHICTEGCTSVGPYEVGPTKNRGPCSKFATCQGLQLLIRHFATCKKRVNGGCLRCKRMWQLLRLHSSMCEQ 192 (260)
Q Consensus 113 ql~~am~~L~Ha~~~~C~~~~~~~~~~~~~~~~C~~~~~C~~lk~l~~H~~~C~~r~~ggC~~Ckr~~~Ll~lHa~~C~~ 192 (260)
.|++-+-+|.||.. |+.. . ..++..++|. .+.|..||.|+.|+.+|+....-.-++|...++|+ .|.+.|.+
T Consensus 15 ~iqqqL~lL~HA~k--C~~~--e--~~~g~~~~C~-lp~C~~mK~ll~Hm~~C~~g~~C~~~~C~sSr~ii-~H~k~C~~ 86 (101)
T 1l3e_B 15 LIQQQLVLLLHAHK--CQRR--E--QANGEVRQCN-LPHCRTMKNVLNHMTHCQSGKSCQVAHCASSRQII-SHWKNCTR 86 (101)
T ss_dssp HHHHHHHHHHHHHH--HHHH--H--TTTSSCCCCS-CHHHHHHHHHHHHHTTCCSCSSSSCHHHHHHHHHH-HHHHHCCS
T ss_pred HHHHHHHHHHHHHH--cCCc--c--ccCCcCCCCC-CCccHHHHHHHHHHHHccCCCCCCCCCCHHHHHHH-HHHHhCCC
Confidence 36677899999999 9831 1 0112246899 99999999999999999864444446799999998 59999999
Q ss_pred CCCCCCCcchhhHHHH
Q 024961 193 SDSCRVPLCRQFKLKA 208 (260)
Q Consensus 193 ~~~C~VP~C~~~k~~~ 208 (260)
.+ |+| |..+|+.+
T Consensus 87 ~~-CpV--C~pvk~~~ 99 (101)
T 1l3e_B 87 HD-CPV--CLPLKNAG 99 (101)
T ss_dssp SC-CTT--HHHHHCCS
T ss_pred CC-CCc--CHHHHhhh
Confidence 87 966 99998754
No 9
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=98.63 E-value=7.2e-09 Score=82.89 Aligned_cols=53 Identities=32% Similarity=0.492 Sum_probs=24.6
Q ss_pred hhHHHHHHHhhhccCchhHHHHHHHHHhhcCCcccHHHHHHHHhhCCChHHHH
Q 024961 2 EKYGIHLLALSHVYSVPQLKQRCTKGLGERLTIDNVVDVLQLARLCDAPDLYL 54 (260)
Q Consensus 2 e~~v~~LL~AAd~yqI~~LK~~Ce~~L~~~Ls~eN~l~il~lA~~~~a~~Lk~ 54 (260)
.+++.+||.+|++|+++.|+..|+++|.+.++++||+.++.+|+.|++++|++
T Consensus 93 ~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~l~~A~~~~~~~Lk~ 145 (145)
T 4eoz_A 93 DKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKT 145 (145)
T ss_dssp GGTHHHHHHHHHHTTCHHHHHHHHCC---------------------------
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHhcC
Confidence 36899999999999999999999999999999999999999999999999874
No 10
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=96.34 E-value=0.001 Score=52.80 Aligned_cols=34 Identities=24% Similarity=0.208 Sum_probs=19.1
Q ss_pred CCcccHHHHHHHHhhCCChHHHHHHHHHHHHhhh
Q 024961 32 LTIDNVVDVLQLARLCDAPDLYLRCMKLAASRFK 65 (260)
Q Consensus 32 Ls~eN~l~il~lA~~~~a~~Lk~~c~~FI~~nf~ 65 (260)
++.+|+.+++.+|+.|..+.|+..|.+|+.+++.
T Consensus 87 i~~~~v~~ll~~A~~l~i~~L~~~C~~~l~~~l~ 120 (135)
T 2yy9_A 87 LTSGNRDQVLLAAKELRVPEAVELCQSFQPQTSV 120 (135)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHCCC----
T ss_pred CCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhcc
Confidence 5556666666666666666666666666665553
No 11
>1l3e_B P300 protein; protein-protein complex, transcription; NMR {Homo sapiens} SCOP: g.53.1.1 PDB: 1p4q_B 1r8u_B 2ka4_A 1l8c_A 1u2n_A 1liq_A
Probab=96.22 E-value=0.0063 Score=47.24 Aligned_cols=51 Identities=24% Similarity=0.602 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHhhhCCccCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhcCccCCCCCcchHHHHH
Q 024961 114 LSEAMECLEHICTEGCTSVGPYEVGPTKNRGPCSKFATCQGLQLLIRHFATCKKRVNGGCLRCKRMWQ 181 (260)
Q Consensus 114 l~~am~~L~Ha~~~~C~~~~~~~~~~~~~~~~C~~~~~C~~lk~l~~H~~~C~~r~~ggC~~Ckr~~~ 181 (260)
=..+-++|.|.-. |.. ...|. ++.|...+.|+.|...|+.. +|++|.-++.
T Consensus 47 C~~mK~ll~Hm~~--C~~-----------g~~C~-~~~C~sSr~ii~H~k~C~~~---~CpVC~pvk~ 97 (101)
T 1l3e_B 47 CRTMKNVLNHMTH--CQS-----------GKSCQ-VAHCASSRQIISHWKNCTRH---DCPVCLPLKN 97 (101)
T ss_dssp HHHHHHHHHHHTT--CCS-----------CSSSS-CHHHHHHHHHHHHHHHCCSS---CCTTHHHHHC
T ss_pred cHHHHHHHHHHHH--ccC-----------CCCCC-CCCCHHHHHHHHHHHhCCCC---CCCcCHHHHh
Confidence 3456689999977 972 26899 99999999999999999854 8999987763
No 12
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=95.68 E-value=0.009 Score=49.13 Aligned_cols=49 Identities=8% Similarity=0.109 Sum_probs=36.8
Q ss_pred hHHHHHHHhhhccCchhHHHHHHHHHhhcC---CcccHHHHHHHHhhCCChH
Q 024961 3 KYGIHLLALSHVYSVPQLKQRCTKGLGERL---TIDNVVDVLQLARLCDAPD 51 (260)
Q Consensus 3 ~~v~~LL~AAd~yqI~~LK~~Ce~~L~~~L---s~eN~l~il~lA~~~~a~~ 51 (260)
+++.+||.||++++|+.|.++|+.+|...| |++.+-.++.+...|...+
T Consensus 97 ~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~gkt~eeir~~f~I~~d~t~eE 148 (159)
T 2ast_A 97 GTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEE 148 (159)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSSCCHHHHHHHTTCCCCSCTTH
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCHHH
Confidence 689999999999999999999999997765 5555555555554454443
No 13
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=95.57 E-value=0.005 Score=50.88 Aligned_cols=47 Identities=6% Similarity=0.116 Sum_probs=36.2
Q ss_pred hHHHHHHHhhhccCchhHHHHHHHHHhhcC---CcccHHHHHHHHhhCCC
Q 024961 3 KYGIHLLALSHVYSVPQLKQRCTKGLGERL---TIDNVVDVLQLARLCDA 49 (260)
Q Consensus 3 ~~v~~LL~AAd~yqI~~LK~~Ce~~L~~~L---s~eN~l~il~lA~~~~a 49 (260)
+++.+|+.||++++|..|.++|+.++...| |++++-.++.++..|.-
T Consensus 96 ~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eeir~~f~I~nd~t~ 145 (160)
T 2p1m_A 96 ATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTP 145 (160)
T ss_dssp -----CHHHHHHTTCHHHHHHHHHHHHHTTTTCCHHHHHHHTTCCCCCCH
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCH
Confidence 578899999999999999999999999988 77777777777666653
No 14
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=94.58 E-value=0.03 Score=45.17 Aligned_cols=41 Identities=7% Similarity=0.039 Sum_probs=34.6
Q ss_pred hHHHHHHHhhhccCchhHHHHHHHHHhhcCCcccHHHHHHH
Q 024961 3 KYGIHLLALSHVYSVPQLKQRCTKGLGERLTIDNVVDVLQL 43 (260)
Q Consensus 3 ~~v~~LL~AAd~yqI~~LK~~Ce~~L~~~Ls~eN~l~il~l 43 (260)
+++.+|+.||++++|..|.++|+.++...|.-.+.-+|..+
T Consensus 92 ~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eeiR~~ 132 (141)
T 1fs1_B 92 GTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKT 132 (141)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 57889999999999999999999999988877776665543
No 15
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=94.44 E-value=0.042 Score=41.09 Aligned_cols=32 Identities=25% Similarity=0.371 Sum_probs=24.1
Q ss_pred CCcccHHHHHHHHhhCCChHHHHHHHHHHHHh
Q 024961 32 LTIDNVVDVLQLARLCDAPDLYLRCMKLAASR 63 (260)
Q Consensus 32 Ls~eN~l~il~lA~~~~a~~Lk~~c~~FI~~n 63 (260)
++.+|+.+++.+|+.|+.+.|+..|.+|+.+|
T Consensus 77 ~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~ 108 (109)
T 2vkp_A 77 LEADTVLATLYAAKKYIVPALAKACVNFLETS 108 (109)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCcHHHHHHHHHHHHhh
Confidence 66677777777777777777777777777765
No 16
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=91.06 E-value=0.2 Score=38.52 Aligned_cols=31 Identities=19% Similarity=0.268 Sum_probs=19.4
Q ss_pred CCcccHHHHHHHHhhCCChHHHHHHHHHHHH
Q 024961 32 LTIDNVVDVLQLARLCDAPDLYLRCMKLAAS 62 (260)
Q Consensus 32 Ls~eN~l~il~lA~~~~a~~Lk~~c~~FI~~ 62 (260)
++.+|+.+++.+|+.|..+.|+..|.+|+.+
T Consensus 95 ~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~ 125 (127)
T 1r29_A 95 LREGNIMAVMATAMYLQMEHVVDTCRKFIKA 125 (127)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 4556666666666666666666666666554
No 17
>3t92_A Histone acetyltransferase P300 TAZ2-ccaat/enhance protein epsilon; TAZ2 domain, zinc finger, transcription, 300/CBP, C/EBP PROT transferase; HET: TCE TAM; 1.50A {Homo sapiens} PDB: 2k8f_A 2ka6_A 2kje_A 1f81_A
Probab=91.03 E-value=0.36 Score=38.32 Aligned_cols=51 Identities=24% Similarity=0.449 Sum_probs=39.1
Q ss_pred HHHHHHHHhhhCCccCCCCCCCCCCCCCCCCCCcccHHHHHHH-HHHhhcCccCCCCCcc--hHHHHHHHH
Q 024961 117 AMECLEHICTEGCTSVGPYEVGPTKNRGPCSKFATCQGLQLLI-RHFATCKKRVNGGCLR--CKRMWQLLR 184 (260)
Q Consensus 117 am~~L~Ha~~~~C~~~~~~~~~~~~~~~~C~~~~~C~~lk~l~-~H~~~C~~r~~ggC~~--Ckr~~~Ll~ 184 (260)
.-.+|.|... |.. ..+|+ .+.|..+..|+ .|...|... .|++ |..+..-++
T Consensus 39 mK~ll~H~~~--C~~-----------r~~~~-c~~C~~~~~Ll~~Hak~C~~~---~C~VP~C~~iK~~~~ 92 (121)
T 3t92_A 39 MKRVVQHTKG--CKR-----------KTNGG-CPICKQLIALAAYHAKHCQEN---KCPVPFCLNIKQKLR 92 (121)
T ss_dssp HHHHHHHHHH--CSS-----------TTTTT-CHHHHHHHHHHHHHHTTCCCT---TCCSTTHHHHHHHHH
T ss_pred HHHHHHHHHH--ccC-----------CCCCC-CCchHHHHHHHHHHHHhCCCC---CCCCCccHHHHHHHH
Confidence 3378899977 962 35677 88999999999 599999743 6988 988765543
No 18
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=90.44 E-value=0.11 Score=40.85 Aligned_cols=35 Identities=11% Similarity=0.051 Sum_probs=26.7
Q ss_pred hhHHHHHHHhhhccCchhHHHHHHHHHhhcCCccc
Q 024961 2 EKYGIHLLALSHVYSVPQLKQRCTKGLGERLTIDN 36 (260)
Q Consensus 2 e~~v~~LL~AAd~yqI~~LK~~Ce~~L~~~Ls~eN 36 (260)
++++.+||.+|++|+|+.|++.|++||.+.+...+
T Consensus 89 ~~~v~~ll~~A~~l~i~~L~~~C~~~l~~~l~~~~ 123 (135)
T 2yy9_A 89 SGNRDQVLLAAKELRVPEAVELCQSFQPQTSVGQA 123 (135)
T ss_dssp TTTHHHHHHHHHHTTCHHHHHHHHHCCC-------
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccCCC
Confidence 36899999999999999999999999999876544
No 19
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=89.75 E-value=0.17 Score=38.68 Aligned_cols=32 Identities=28% Similarity=0.285 Sum_probs=18.7
Q ss_pred CCcccHHHHHHHHhhCCChHHHHHHHHHHHHh
Q 024961 32 LTIDNVVDVLQLARLCDAPDLYLRCMKLAASR 63 (260)
Q Consensus 32 Ls~eN~l~il~lA~~~~a~~Lk~~c~~FI~~n 63 (260)
++.+|+.+++.+|+.|..+.|+..|.+|+.++
T Consensus 86 ~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~ 117 (119)
T 3b84_A 86 LTSGNRDQVLLAARELRVPEAVELCQSFKPKT 117 (119)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHCC---
T ss_pred cCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHc
Confidence 55566666666666666666666666665544
No 20
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=89.15 E-value=0.38 Score=36.73 Aligned_cols=30 Identities=33% Similarity=0.509 Sum_probs=24.5
Q ss_pred CCcccHHHHHHHHhhCCChHHHHHHHHHHH
Q 024961 32 LTIDNVVDVLQLARLCDAPDLYLRCMKLAA 61 (260)
Q Consensus 32 Ls~eN~l~il~lA~~~~a~~Lk~~c~~FI~ 61 (260)
++.+|+.+++.+|+.|..+.|+..|.+|+.
T Consensus 88 i~~~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 88 LSPENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 677888888888888888888888888763
No 21
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=88.69 E-value=0.43 Score=36.02 Aligned_cols=30 Identities=20% Similarity=0.209 Sum_probs=22.6
Q ss_pred CCcccHHHHHHHHhhCCChHHHHHHHHHHH
Q 024961 32 LTIDNVVDVLQLARLCDAPDLYLRCMKLAA 61 (260)
Q Consensus 32 Ls~eN~l~il~lA~~~~a~~Lk~~c~~FI~ 61 (260)
++.+|+.+++.+|+.|..+.|+..|.+|+.
T Consensus 86 ~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 86 LDSWNVKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 667777777777777777777777777763
No 22
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=88.21 E-value=0.45 Score=36.32 Aligned_cols=28 Identities=21% Similarity=0.388 Sum_probs=12.0
Q ss_pred CcccHHHHHHHHhhCCChHHHHHHHHHH
Q 024961 33 TIDNVVDVLQLARLCDAPDLYLRCMKLA 60 (260)
Q Consensus 33 s~eN~l~il~lA~~~~a~~Lk~~c~~FI 60 (260)
+.+|+.+++.+|+.|..+.|+..|.+|+
T Consensus 90 ~~~~~~~ll~~A~~~~i~~L~~~c~~~l 117 (121)
T 1buo_A 90 KAEDLDDLLYAAEILEIEYLEEQCLKML 117 (121)
T ss_dssp CGGGHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence 3344444444444444444444444443
No 23
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=87.65 E-value=0.58 Score=35.43 Aligned_cols=29 Identities=34% Similarity=0.529 Sum_probs=18.8
Q ss_pred CCcccHHHHHHHHhhCCChHHHHHHHHHH
Q 024961 32 LTIDNVVDVLQLARLCDAPDLYLRCMKLA 60 (260)
Q Consensus 32 Ls~eN~l~il~lA~~~~a~~Lk~~c~~FI 60 (260)
++.+|+.+++.+|+.|..+.|+..|.+|+
T Consensus 91 ~~~~~~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 91 VSTANVGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp CCGGGHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 45566666666666666666666666664
No 24
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=87.24 E-value=0.61 Score=38.65 Aligned_cols=38 Identities=8% Similarity=0.077 Sum_probs=29.0
Q ss_pred hHHHHHHHhhhccCchhHHHHHHHHHhhcCCcccHHHH
Q 024961 3 KYGIHLLALSHVYSVPQLKQRCTKGLGERLTIDNVVDV 40 (260)
Q Consensus 3 ~~v~~LL~AAd~yqI~~LK~~Ce~~L~~~Ls~eN~l~i 40 (260)
+.+.+|+.||++++|..|.++|+.++...|.--+.-.|
T Consensus 104 ~~LfeLi~AAnyLdIk~Lldl~c~~vA~~ikgktpeei 141 (169)
T 3v7d_A 104 EMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRSPEEI 141 (169)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHHHcCCCHHHH
Confidence 56789999999999999999999998655444443333
No 25
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=85.53 E-value=0.72 Score=36.78 Aligned_cols=33 Identities=18% Similarity=0.086 Sum_probs=30.8
Q ss_pred CCcccHHHHHHHHhhCCChHHHHHHHHHHHHhh
Q 024961 32 LTIDNVVDVLQLARLCDAPDLYLRCMKLAASRF 64 (260)
Q Consensus 32 Ls~eN~l~il~lA~~~~a~~Lk~~c~~FI~~nf 64 (260)
++.+|+.+++.+|+.|..+.|+..|.+|+.+++
T Consensus 100 ~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l 132 (172)
T 3htm_A 100 NLDKMADDLLAAADKYALERLKVMCEDALCSNL 132 (172)
T ss_dssp TGGGTHHHHHHHHHHTTCHHHHHHHHHHHHHTC
T ss_pred CcHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhC
Confidence 678999999999999999999999999999764
No 26
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=83.40 E-value=0.52 Score=36.54 Aligned_cols=33 Identities=18% Similarity=0.086 Sum_probs=27.1
Q ss_pred CCcccHHHHHHHHhhCCChHHHHHHHHHHHHhh
Q 024961 32 LTIDNVVDVLQLARLCDAPDLYLRCMKLAASRF 64 (260)
Q Consensus 32 Ls~eN~l~il~lA~~~~a~~Lk~~c~~FI~~nf 64 (260)
++.+|+.+++.+|+.|..+.|+..|.+|+.+++
T Consensus 91 ~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l 123 (145)
T 4eoz_A 91 NLDKMADDLLAAADKYALERLKVMCEDALCSNL 123 (145)
T ss_dssp TGGGTHHHHHHHHHHTTCHHHHHHHHCC-----
T ss_pred CcHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC
Confidence 678999999999999999999999999998765
No 27
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=83.38 E-value=0.54 Score=37.28 Aligned_cols=29 Identities=34% Similarity=0.406 Sum_probs=21.2
Q ss_pred CCcccHHHHHHHHhhCCChHHHHHHHHHH
Q 024961 32 LTIDNVVDVLQLARLCDAPDLYLRCMKLA 60 (260)
Q Consensus 32 Ls~eN~l~il~lA~~~~a~~Lk~~c~~FI 60 (260)
++.+|+.+++.+|+.|..+.|+..|.+|+
T Consensus 115 i~~~~v~~ll~~A~~l~i~~L~~~C~~~L 143 (144)
T 2ppi_A 115 LNEDTIQDVVQAADLLLLTDLKTLCCEFL 143 (144)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHhCcHHHHHHHHHHh
Confidence 56677777777777777777777777664
No 28
>3p57_P Histone acetyltransferase P300; protein-DNA complex, transcription factor, transcriptional activation, zinc finger; HET: DNA; 2.19A {Homo sapiens} PDB: 3io2_A
Probab=82.50 E-value=1.2 Score=34.87 Aligned_cols=30 Identities=27% Similarity=0.608 Sum_probs=22.3
Q ss_pred HHHHHHhcCCCCCCCCCCcchhhHHHHhhhh
Q 024961 182 LLRLHSSMCEQSDSCRVPLCRQFKLKAQLEK 212 (260)
Q Consensus 182 Ll~lHa~~C~~~~~C~VP~C~~~k~~~~~~~ 212 (260)
.+-+||..|+++ +|.+|.|..+|.-++...
T Consensus 17 ~~L~HA~~C~~~-~C~~~~C~~mK~ll~H~~ 46 (112)
T 3p57_P 17 QSLVHACQCRNA-NCSLPSCQKMKRVVQHTK 46 (112)
T ss_dssp HHHHHHHHCCCT-TCCCTTHHHHHHHHTCTT
T ss_pred HHHHHHccCCCC-CCCChhhHHHHHHHHHHH
Confidence 456788888876 488888888888777654
No 29
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=80.85 E-value=0.25 Score=38.24 Aligned_cols=28 Identities=4% Similarity=0.055 Sum_probs=9.3
Q ss_pred CcccHHHHHHHHhhCCChHHHHHHHHHH
Q 024961 33 TIDNVVDVLQLARLCDAPDLYLRCMKLA 60 (260)
Q Consensus 33 s~eN~l~il~lA~~~~a~~Lk~~c~~FI 60 (260)
+.+|+.+++.+|+.|..+.|++.|.+|+
T Consensus 97 ~~~~~~~ll~~A~~~~i~~l~~~C~~~L 124 (129)
T 3ga1_A 97 NVGDQDLLMYTAGFLQIQEIMEKGTEFF 124 (129)
T ss_dssp CTTTHHHHHHHHHHTTBTTSSCC-----
T ss_pred CHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 3334444444444444444444444333
No 30
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=78.69 E-value=1.4 Score=37.70 Aligned_cols=34 Identities=32% Similarity=0.385 Sum_probs=30.9
Q ss_pred cCCcccHHHHHHHHhhCCChHHHHHHHHHHHHhh
Q 024961 31 RLTIDNVVDVLQLARLCDAPDLYLRCMKLAASRF 64 (260)
Q Consensus 31 ~Ls~eN~l~il~lA~~~~a~~Lk~~c~~FI~~nf 64 (260)
.++.+|+.+++.+|+.|..+.|+..|.+|+.+++
T Consensus 98 ~i~~~~v~~ll~~A~~l~i~~l~~~c~~~L~~~l 131 (256)
T 3hve_A 98 RLNEDTIQDVVQAADLLLLTDLKTLCCEFLEGCI 131 (256)
T ss_dssp CCC-CCHHHHHHHHHHHTCHHHHHHHHHHHHHTC
T ss_pred cccHhHHHHHHHHHHHHChHHHHHHHHHHHHhhC
Confidence 3789999999999999999999999999999775
No 31
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=77.51 E-value=1.9 Score=32.40 Aligned_cols=30 Identities=17% Similarity=0.148 Sum_probs=27.6
Q ss_pred hHHHHHHHhhhccCchhHHHHHHHHHhhcC
Q 024961 3 KYGIHLLALSHVYSVPQLKQRCTKGLGERL 32 (260)
Q Consensus 3 ~~v~~LL~AAd~yqI~~LK~~Ce~~L~~~L 32 (260)
+|...++..|+.|+.+.|+..|..|+.++.
T Consensus 11 ~NCl~i~~~A~~~~~~~L~~~a~~fi~~nF 40 (105)
T 2eqx_A 11 GNCLQVMWLADRHSDPELYTAAKHCAKTHL 40 (105)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 688999999999999999999999998763
No 32
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=77.43 E-value=1.6 Score=37.99 Aligned_cols=41 Identities=20% Similarity=0.182 Sum_probs=34.6
Q ss_pred HHHHHhh---cCCcccHHHHHHHHhhCCChHHHHHHHHHHHHhh
Q 024961 24 CTKGLGE---RLTIDNVVDVLQLARLCDAPDLYLRCMKLAASRF 64 (260)
Q Consensus 24 Ce~~L~~---~Ls~eN~l~il~lA~~~~a~~Lk~~c~~FI~~nf 64 (260)
--+|+-. .++.+|+.+++.+|+.|..+.|+..|.+|+.+++
T Consensus 96 ll~~~Ytg~~~i~~~~v~~ll~~A~~l~i~~L~~~c~~~L~~~l 139 (279)
T 3i3n_A 96 VIEYMYTGRIRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKL 139 (279)
T ss_dssp HHHHHHHSEEEEETTTHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHhhCcCCcccCHHHHHHHHHHHHHHCcHHHHHHHHHHHHHcC
Confidence 3445543 3788999999999999999999999999999764
No 33
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=68.47 E-value=2.7 Score=36.94 Aligned_cols=33 Identities=18% Similarity=0.086 Sum_probs=29.9
Q ss_pred CCcccHHHHHHHHhhCCChHHHHHHHHHHHHhh
Q 024961 32 LTIDNVVDVLQLARLCDAPDLYLRCMKLAASRF 64 (260)
Q Consensus 32 Ls~eN~l~il~lA~~~~a~~Lk~~c~~FI~~nf 64 (260)
++.+|+.+++.+|+.|+.+.|+..|.+|+.+++
T Consensus 240 ~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~ 272 (312)
T 3hqi_A 240 NLDKMADDLLAAADKYALERLKVMCEDALCSNL 272 (312)
T ss_dssp THHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred ChHHHHHHHHHHHHHhCHHHHHHHHHHHHHccC
Confidence 456899999999999999999999999998764
No 34
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=64.10 E-value=0.33 Score=37.31 Aligned_cols=29 Identities=17% Similarity=0.348 Sum_probs=17.0
Q ss_pred CCcccHHHHHHHHhhCCChHHHHHHHHHH
Q 024961 32 LTIDNVVDVLQLARLCDAPDLYLRCMKLA 60 (260)
Q Consensus 32 Ls~eN~l~il~lA~~~~a~~Lk~~c~~FI 60 (260)
++.+|+.+++.+|+.|..+.|+..|.+|+
T Consensus 94 i~~~~v~~ll~~A~~~~~~~L~~~C~~~l 122 (124)
T 2ihc_A 94 LSKENVDEVCKCVEFLSVHNIEESCFQFL 122 (124)
T ss_dssp EETTTHHHHHHHHHHHTBSSCCGGGGGTC
T ss_pred cCHHHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence 45556666666666666666665555543
No 35
>3b0b_B CENP-S, centromere protein S; histone fold, DNA binding, DNA, nucleus, DNA binding protein; 2.15A {Gallus gallus}
Probab=62.99 E-value=17 Score=28.03 Aligned_cols=88 Identities=16% Similarity=0.064 Sum_probs=66.5
Q ss_pred hHHHHHHHhhhccCchhHHHHHHHHHhhcCCcccHHHHHHHHhhCCChHHHHHHHHHHHHhhhhhhcchhhhHhhhcCch
Q 024961 3 KYGIHLLALSHVYSVPQLKQRCTKGLGERLTIDNVVDVLQLARLCDAPDLYLRCMKLAASRFKAVEKTEGWKFLQDHDPW 82 (260)
Q Consensus 3 ~~v~~LL~AAd~yqI~~LK~~Ce~~L~~~Ls~eN~l~il~lA~~~~a~~Lk~~c~~FI~~nf~~V~~te~f~~L~~~~P~ 82 (260)
+...+-|.+|=.|-|.++.+--...+..+++++-+..+..+...| +..+..-+..|...-=...+..+++..+.+.+|.
T Consensus 11 ~~~~~~LKaal~~~V~rI~~~~g~~~~~~vs~~~i~aL~E~~~~~-~~~ia~Da~~fA~HAgRkTI~~eDV~La~Rrn~~ 89 (107)
T 3b0b_B 11 ELLIQRLRAAVHYTTGCLCQDVAEDKGVLFSKQTVAAISEITFRQ-CENFARDLEMFARHAKRSTITSEDVKLLARRSNS 89 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCEECHHHHHHHHHHHHHH-HHHHHHHHHHHHHHTTCSEECHHHHHHHTTTCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCccCHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCcCcCCHHHHHHHHHhCHH
Confidence 345677888888888776555544455789999999999999988 5677777777766444566788999999999999
Q ss_pred HHHHHHHhh
Q 024961 83 LELQILQFM 91 (260)
Q Consensus 83 L~~eil~~v 91 (260)
|..-+-+..
T Consensus 90 l~~~l~~~~ 98 (107)
T 3b0b_B 90 LLKYITQKS 98 (107)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 876554443
No 36
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=55.11 E-value=0.42 Score=36.55 Aligned_cols=25 Identities=24% Similarity=0.422 Sum_probs=10.6
Q ss_pred CCcccHHHHHHHHhhCCChHHHHHH
Q 024961 32 LTIDNVVDVLQLARLCDAPDLYLRC 56 (260)
Q Consensus 32 Ls~eN~l~il~lA~~~~a~~Lk~~c 56 (260)
++.+|+.+++.+|+.|..+.|+..|
T Consensus 97 ~~~~~v~~ll~~A~~l~i~~L~~~C 121 (125)
T 3ohu_A 97 LSRENIREVIRCAEFLRMHNLEDSC 121 (125)
T ss_dssp ECTTTHHHHHHHHHHHTBSSCTTSS
T ss_pred ECHHHHHHHHHHHHHhCCHHHHHHH
Confidence 3344444444444444444443333
No 37
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=54.06 E-value=10 Score=30.55 Aligned_cols=36 Identities=17% Similarity=0.179 Sum_probs=33.2
Q ss_pred cCCcccHHHHHHHHhhCCChHHHHHHHHHHHHhhhh
Q 024961 31 RLTIDNVVDVLQLARLCDAPDLYLRCMKLAASRFKA 66 (260)
Q Consensus 31 ~Ls~eN~l~il~lA~~~~a~~Lk~~c~~FI~~nf~~ 66 (260)
.++.+|+.+++..|...+...|...|-+|++..+..
T Consensus 93 ~id~~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~g 128 (159)
T 2ast_A 93 KVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKG 128 (159)
T ss_dssp CSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSS
T ss_pred cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC
Confidence 489999999999999999999999999999987654
No 38
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=33.98 E-value=34 Score=26.85 Aligned_cols=41 Identities=17% Similarity=0.131 Sum_probs=35.2
Q ss_pred HHHHHhhcCCcccHHHHHHHHhhCCChHHHHHHHHHHHHhhhh
Q 024961 24 CTKGLGERLTIDNVVDVLQLARLCDAPDLYLRCMKLAASRFKA 66 (260)
Q Consensus 24 Ce~~L~~~Ls~eN~l~il~lA~~~~a~~Lk~~c~~FI~~nf~~ 66 (260)
=.+|+ .++.+++.+++..|.-.+...|...|-+|++.....
T Consensus 83 D~~F~--~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikg 123 (141)
T 1fs1_B 83 DQEFL--KVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKG 123 (141)
T ss_dssp HHHHT--CSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHH--hCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcC
Confidence 33445 489999999999999999999999999999977654
No 39
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=27.47 E-value=37 Score=27.23 Aligned_cols=44 Identities=11% Similarity=0.153 Sum_probs=27.9
Q ss_pred cCCcccHHHHHHHHhhCCChHHHHHHHHHHHHhhhhhhcchhhhH
Q 024961 31 RLTIDNVVDVLQLARLCDAPDLYLRCMKLAASRFKAVEKTEGWKF 75 (260)
Q Consensus 31 ~Ls~eN~l~il~lA~~~~a~~Lk~~c~~FI~~nf~~V~~te~f~~ 75 (260)
.++.+++.+++..|.-.+...|...|-+|++..+.. -..++.+.
T Consensus 92 ~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikg-kt~eeir~ 135 (160)
T 2p1m_A 92 KIDQATLFELILAANYLNIKNLLDLTCQTVADMIKG-KTPEEIRT 135 (160)
T ss_dssp ---------CHHHHHHTTCHHHHHHHHHHHHHTTTT-CCHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCHHHHHH
Confidence 389999999999999999999999999999977643 23344443
No 40
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=25.51 E-value=25 Score=26.19 Aligned_cols=22 Identities=9% Similarity=0.113 Sum_probs=13.8
Q ss_pred CCcccHHHHHHHHhhCCChHHH
Q 024961 32 LTIDNVVDVLQLARLCDAPDLY 53 (260)
Q Consensus 32 Ls~eN~l~il~lA~~~~a~~Lk 53 (260)
++.+|+.+++.+|+.|..+.|+
T Consensus 93 ~~~~~~~~ll~~A~~l~i~~L~ 114 (116)
T 3fkc_A 93 VRSDLLDELIKSGQLLGVKFIA 114 (116)
T ss_dssp CCHHHHHHHHHHHHHHTCHHHH
T ss_pred CCHHHHHHHHHHHHHhCccccC
Confidence 4566666666666666666554
No 41
>2plx_B Peptide inhibitor; helix-turn-helix, hydrolase; HET: FLC; 1.56A {Bos taurus}
Probab=25.12 E-value=81 Score=17.83 Aligned_cols=20 Identities=30% Similarity=0.632 Sum_probs=16.7
Q ss_pred HHHHHHhhCCChHHHHHHHH
Q 024961 39 DVLQLARLCDAPDLYLRCMK 58 (260)
Q Consensus 39 ~il~lA~~~~a~~Lk~~c~~ 58 (260)
.++-.|..++.++|...|++
T Consensus 3 kvmcyaqrhsspellrrcld 22 (26)
T 2plx_B 3 KVMCYAQRHSSPELLRRCLD 22 (26)
T ss_dssp HHHHHHBCCCCHHHHHHHHH
T ss_pred eEEeehhhcCCHHHHHHHHh
Confidence 45678999999999999875
No 42
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=22.90 E-value=59 Score=27.69 Aligned_cols=26 Identities=19% Similarity=0.301 Sum_probs=21.7
Q ss_pred HHHHHhhhccCchhHHHHHHHHHhhc
Q 024961 6 IHLLALSHVYSVPQLKQRCTKGLGER 31 (260)
Q Consensus 6 ~~LL~AAd~yqI~~LK~~Ce~~L~~~ 31 (260)
..++.-|++|+|+.|...|.+.|.++
T Consensus 88 ~~l~eEA~FygL~~Lv~~l~~~i~er 113 (202)
T 3drx_A 88 EGVLEEAEFYNITSLIKLVKDKIRER 113 (202)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCcHHHHHHHHHHHHHH
Confidence 56888899999999999998888653
Done!