BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024967
(260 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FM19|HIR1_ARATH Hypersensitive-induced response protein 1 OS=Arabidopsis thaliana
GN=HIR1 PE=1 SV=1
Length = 286
Score = 344 bits (883), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 168/179 (93%), Positives = 176/179 (98%)
Query: 79 VIRASIPKLNLDDAFEQKNEIAKAVEEELEKAMSAYGYEIVQTLIVDIEPDEHVKRAMNE 138
VIRAS+PKL LDD FEQKN+IAKAVEEELEKAMSAYGYEIVQTLIVDIEPDEHVKRAMNE
Sbjct: 104 VIRASVPKLLLDDVFEQKNDIAKAVEEELEKAMSAYGYEIVQTLIVDIEPDEHVKRAMNE 163
Query: 139 INAAARLRVAANEKAEAEKILQIKRAEGEAESKYLSGLGIARQRQAIVDGLRDSVLGFSI 198
INAAAR+R+AANEKAEAEKILQIKRAEGEAESKYLSGLGIARQRQAIVDGLRDSVLGF++
Sbjct: 164 INAAARMRLAANEKAEAEKILQIKRAEGEAESKYLSGLGIARQRQAIVDGLRDSVLGFAV 223
Query: 199 NVPGTTAKDVMDMVLVTQYFDTMKEIGAASKSSAVFIPHGPGAVRDVATQIRDGLLQAS 257
NVPGTTAKDVMDMVLVTQYFDTMKEIGA+SKSSAVFIPHGPGAVRDVA+QIRDGLLQ S
Sbjct: 224 NVPGTTAKDVMDMVLVTQYFDTMKEIGASSKSSAVFIPHGPGAVRDVASQIRDGLLQGS 282
>sp|Q9SRH6|HIR3_ARATH Hypersensitive-induced response protein 3 OS=Arabidopsis thaliana
GN=HIR3 PE=1 SV=1
Length = 285
Score = 322 bits (826), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 153/179 (85%), Positives = 172/179 (96%)
Query: 79 VIRASIPKLNLDDAFEQKNEIAKAVEEELEKAMSAYGYEIVQTLIVDIEPDEHVKRAMNE 138
VIRA +PKLNLDD FEQKNEIAK+VEEEL+KAM+AYGYEI+QTLI+DIEPD+ VKRAMNE
Sbjct: 104 VIRACVPKLNLDDVFEQKNEIAKSVEEELDKAMTAYGYEILQTLIIDIEPDQQVKRAMNE 163
Query: 139 INAAARLRVAANEKAEAEKILQIKRAEGEAESKYLSGLGIARQRQAIVDGLRDSVLGFSI 198
INAAAR+RVAA+EKAEAEKI+QIKRAEGEAESKYLSGLGIARQRQAIVDGLRDSVLGF+
Sbjct: 164 INAAARMRVAASEKAEAEKIIQIKRAEGEAESKYLSGLGIARQRQAIVDGLRDSVLGFAG 223
Query: 199 NVPGTTAKDVMDMVLVTQYFDTMKEIGAASKSSAVFIPHGPGAVRDVATQIRDGLLQAS 257
NVPGT+AKDV+DMV++TQYFDTM++IGA SKSSAVFIPHGPGAV DVA QIR+GLLQA+
Sbjct: 224 NVPGTSAKDVLDMVMMTQYFDTMRDIGATSKSSAVFIPHGPGAVSDVAAQIRNGLLQAN 282
>sp|Q9CAR7|HIR2_ARATH Hypersensitive-induced response protein 2 OS=Arabidopsis thaliana
GN=HIR2 PE=1 SV=1
Length = 286
Score = 295 bits (756), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 151/179 (84%), Positives = 169/179 (94%)
Query: 79 VIRASIPKLNLDDAFEQKNEIAKAVEEELEKAMSAYGYEIVQTLIVDIEPDEHVKRAMNE 138
VIRAS+PKL+LD FEQKN+IAK VE ELEKAMS YGYEIVQTLIVDIEPD HVKRAMNE
Sbjct: 104 VIRASVPKLDLDSTFEQKNDIAKTVETELEKAMSHYGYEIVQTLIVDIEPDVHVKRAMNE 163
Query: 139 INAAARLRVAANEKAEAEKILQIKRAEGEAESKYLSGLGIARQRQAIVDGLRDSVLGFSI 198
INAA+R+R AA+EKAEAEKILQIKRAEGEAESKYLSG+GIARQRQAIVDGLR+SVL FS
Sbjct: 164 INAASRMREAASEKAEAEKILQIKRAEGEAESKYLSGMGIARQRQAIVDGLRNSVLAFSE 223
Query: 199 NVPGTTAKDVMDMVLVTQYFDTMKEIGAASKSSAVFIPHGPGAVRDVATQIRDGLLQAS 257
+VPGT++KDVMDMVLVTQYFDT+KEIGA+SKS++VFIPHGPGAVRD+A+QIRDGLLQ +
Sbjct: 224 SVPGTSSKDVMDMVLVTQYFDTLKEIGASSKSNSVFIPHGPGAVRDIASQIRDGLLQGN 282
>sp|Q9FHM7|HIR4_ARATH Hypersensitive-induced response protein 4 OS=Arabidopsis thaliana
GN=HIR4 PE=1 SV=1
Length = 292
Score = 238 bits (606), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 109/179 (60%), Positives = 148/179 (82%)
Query: 79 VIRASIPKLNLDDAFEQKNEIAKAVEEELEKAMSAYGYEIVQTLIVDIEPDEHVKRAMNE 138
V+RA +P + LD FEQK E+AK+V EELEK M AYGY I L+VDI PD V++AMNE
Sbjct: 106 VVRALVPMMTLDALFEQKGEVAKSVLEELEKVMGAYGYSIEHILMVDIIPDPSVRKAMNE 165
Query: 139 INAAARLRVAANEKAEAEKILQIKRAEGEAESKYLSGLGIARQRQAIVDGLRDSVLGFSI 198
INAA RL++A+ K EAEKILQ+KRAE EAE+KYL G+G+ARQRQAI DGLR+++L FS
Sbjct: 166 INAAQRLQLASVYKGEAEKILQVKRAEAEAEAKYLGGVGVARQRQAITDGLRENILNFSD 225
Query: 199 NVPGTTAKDVMDMVLVTQYFDTMKEIGAASKSSAVFIPHGPGAVRDVATQIRDGLLQAS 257
V GT+AK+VMD++++TQYFDT++++G +SK++ VF+PHGPG VRD++ QIR+G+++A+
Sbjct: 226 KVEGTSAKEVMDLIMITQYFDTIRDLGNSSKNTTVFLPHGPGHVRDISDQIRNGMMEAA 284
>sp|P16148|PLZ12_LUPPO Protein PPLZ12 OS=Lupinus polyphyllus GN=PPLZ12 PE=2 SV=1
Length = 184
Score = 236 bits (601), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 108/172 (62%), Positives = 144/172 (83%)
Query: 87 LNLDDAFEQKNEIAKAVEEELEKAMSAYGYEIVQTLIVDIEPDEHVKRAMNEINAAARLR 146
+NLDD FEQK E+AK+V EELEK M YGY I L+VDI PD+ V+RAMNEINAA R++
Sbjct: 1 MNLDDLFEQKGEVAKSVLEELEKVMGEYGYNIEHILMVDIIPDDSVRRAMNEINAAQRMQ 60
Query: 147 VAANEKAEAEKILQIKRAEGEAESKYLSGLGIARQRQAIVDGLRDSVLGFSINVPGTTAK 206
+A+ K EAEKILQ+KRAE EAE+KYL G+G+ARQRQAI DGLR+++L FS V GT+AK
Sbjct: 61 LASLYKGEAEKILQVKRAEAEAEAKYLGGVGVARQRQAITDGLRENILNFSHKVEGTSAK 120
Query: 207 DVMDMVLVTQYFDTMKEIGAASKSSAVFIPHGPGAVRDVATQIRDGLLQASQ 258
+VMD++++TQYFDT+K++G +SK++ VFIPHGPG VRD+ QIR+GL+++++
Sbjct: 121 EVMDLIMITQYFDTIKDLGNSSKNTTVFIPHGPGHVRDIGEQIRNGLMESAR 172
>sp|P0AA56|QMCA_SHIFL Protein QmcA OS=Shigella flexneri GN=qmcA PE=3 SV=1
Length = 305
Score = 47.4 bits (111), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 105/226 (46%), Gaps = 28/226 (12%)
Query: 58 TID-ICLVH---HSHAIYDL------LVNCSV--IRASIPKLNLDDAFEQKNEIAKAVEE 105
TID +C + A Y++ ++N ++ IR + + LD+ Q++ I +
Sbjct: 82 TIDAVCFIQVIDAPRAAYEVSNLELAIINLTMTNIRTVLGSMELDEMLSQRDSINSRLLR 141
Query: 106 ELEKAMSAYGYEIVQTLIVDIEPDEHVKRAMNEINAAARLRVAANEKAEAEKILQIKRAE 165
+++A + +G ++ + I D+ P + +MN A R + A +AE + +I +AE
Sbjct: 142 IVDEATNPWGIKVTRIEIRDVRPPAELISSMNAQMKAERTKRAYILEAEGIRQAEILKAE 201
Query: 166 GEAESKYLSGLG---------IARQRQAIVDGLRDSVLGFSINVPGTTAKDVMDMVLVTQ 216
GE +S+ L G AR+R A + ++ +I A ++ + +
Sbjct: 202 GEKQSQILKAEGERQSAFLQAEARERSAEAEARATKMVSEAIASGDIQA---VNYFVAQK 258
Query: 217 YFDTMKEIGAASKSSAVFIPHGP----GAVRDVATQIRDGLLQASQ 258
Y + +++IG++S S V +P G++ +A ++D + +Q
Sbjct: 259 YTEALQQIGSSSNSKVVMMPLEASSLMGSIAGIAELVKDSANKRTQ 304
>sp|P0AA53|QMCA_ECOLI Protein QmcA OS=Escherichia coli (strain K12) GN=qmcA PE=1 SV=1
Length = 305
Score = 47.4 bits (111), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 105/226 (46%), Gaps = 28/226 (12%)
Query: 58 TID-ICLVH---HSHAIYDL------LVNCSV--IRASIPKLNLDDAFEQKNEIAKAVEE 105
TID +C + A Y++ ++N ++ IR + + LD+ Q++ I +
Sbjct: 82 TIDAVCFIQVIDAPRAAYEVSNLELAIINLTMTNIRTVLGSMELDEMLSQRDSINSRLLR 141
Query: 106 ELEKAMSAYGYEIVQTLIVDIEPDEHVKRAMNEINAAARLRVAANEKAEAEKILQIKRAE 165
+++A + +G ++ + I D+ P + +MN A R + A +AE + +I +AE
Sbjct: 142 IVDEATNPWGIKVTRIEIRDVRPPAELISSMNAQMKAERTKRAYILEAEGIRQAEILKAE 201
Query: 166 GEAESKYLSGLG---------IARQRQAIVDGLRDSVLGFSINVPGTTAKDVMDMVLVTQ 216
GE +S+ L G AR+R A + ++ +I A ++ + +
Sbjct: 202 GEKQSQILKAEGERQSAFLQAEARERSAEAEARATKMVSEAIASGDIQA---VNYFVAQK 258
Query: 217 YFDTMKEIGAASKSSAVFIPHGP----GAVRDVATQIRDGLLQASQ 258
Y + +++IG++S S V +P G++ +A ++D + +Q
Sbjct: 259 YTEALQQIGSSSNSKVVMMPLEASSLMGSIAGIAELVKDSANKRTQ 304
>sp|P0AA54|QMCA_ECOL6 Protein QmcA OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928
/ UPEC) GN=qmcA PE=3 SV=1
Length = 305
Score = 47.4 bits (111), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 105/226 (46%), Gaps = 28/226 (12%)
Query: 58 TID-ICLVH---HSHAIYDL------LVNCSV--IRASIPKLNLDDAFEQKNEIAKAVEE 105
TID +C + A Y++ ++N ++ IR + + LD+ Q++ I +
Sbjct: 82 TIDAVCFIQVIDAPRAAYEVSNLELAIINLTMTNIRTVLGSMELDEMLSQRDSINSRLLR 141
Query: 106 ELEKAMSAYGYEIVQTLIVDIEPDEHVKRAMNEINAAARLRVAANEKAEAEKILQIKRAE 165
+++A + +G ++ + I D+ P + +MN A R + A +AE + +I +AE
Sbjct: 142 IVDEATNPWGIKVTRIEIRDVRPPAELISSMNAQMKAERTKRAYILEAEGIRQAEILKAE 201
Query: 166 GEAESKYLSGLG---------IARQRQAIVDGLRDSVLGFSINVPGTTAKDVMDMVLVTQ 216
GE +S+ L G AR+R A + ++ +I A ++ + +
Sbjct: 202 GEKQSQILKAEGERQSAFLQAEARERSAEAEARATKMVSEAIASGDIQA---VNYFVAQK 258
Query: 217 YFDTMKEIGAASKSSAVFIPHGP----GAVRDVATQIRDGLLQASQ 258
Y + +++IG++S S V +P G++ +A ++D + +Q
Sbjct: 259 YTEALQQIGSSSNSKVVMMPLEASSLMGSIAGIAELVKDSANKRTQ 304
>sp|P0AA55|QMCA_ECO57 Protein QmcA OS=Escherichia coli O157:H7 GN=qmcA PE=3 SV=1
Length = 305
Score = 47.4 bits (111), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 105/226 (46%), Gaps = 28/226 (12%)
Query: 58 TID-ICLVH---HSHAIYDL------LVNCSV--IRASIPKLNLDDAFEQKNEIAKAVEE 105
TID +C + A Y++ ++N ++ IR + + LD+ Q++ I +
Sbjct: 82 TIDAVCFIQVIDAPRAAYEVSNLELAIINLTMTNIRTVLGSMELDEMLSQRDSINSRLLR 141
Query: 106 ELEKAMSAYGYEIVQTLIVDIEPDEHVKRAMNEINAAARLRVAANEKAEAEKILQIKRAE 165
+++A + +G ++ + I D+ P + +MN A R + A +AE + +I +AE
Sbjct: 142 IVDEATNPWGIKVTRIEIRDVRPPAELISSMNAQMKAERTKRAYILEAEGIRQAEILKAE 201
Query: 166 GEAESKYLSGLG---------IARQRQAIVDGLRDSVLGFSINVPGTTAKDVMDMVLVTQ 216
GE +S+ L G AR+R A + ++ +I A ++ + +
Sbjct: 202 GEKQSQILKAEGERQSAFLQAEARERSAEAEARATKMVSEAIASGDIQA---VNYFVAQK 258
Query: 217 YFDTMKEIGAASKSSAVFIPHGP----GAVRDVATQIRDGLLQASQ 258
Y + +++IG++S S V +P G++ +A ++D + +Q
Sbjct: 259 YTEALQQIGSSSNSKVVMMPLEASSLMGSIAGIAELVKDSANKRTQ 304
>sp|O26788|Y692_METTH Uncharacterized protein MTH_692 OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=MTH_692 PE=3 SV=1
Length = 318
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 54/109 (49%)
Query: 80 IRASIPKLNLDDAFEQKNEIAKAVEEELEKAMSAYGYEIVQTLIVDIEPDEHVKRAMNEI 139
+R I L LD + I + E L++A +G +V+ I IEP + AM++
Sbjct: 114 LRNIIGDLELDQTLTSREMINTQLREVLDEATDKWGTRVVRVEIQRIEPPGDIVEAMSKQ 173
Query: 140 NAAARLRVAANEKAEAEKILQIKRAEGEAESKYLSGLGIARQRQAIVDG 188
A R++ AA +AE K +IKRAEG+ ++ L G A + + D
Sbjct: 174 MKAERMKRAAILEAEGYKQSEIKRAEGDKQAAILEAEGKAEAIKKVADA 222
>sp|P72655|Y1128_SYNY3 Uncharacterized protein slr1128 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=slr1128 PE=3 SV=1
Length = 321
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 77/168 (45%), Gaps = 12/168 (7%)
Query: 80 IRASIPKLNLDDAFEQKNEIAKAVEEELEKAMSAYGYEIVQTLIVDIEPDEHVKRAMNEI 139
IR+ I KL LD F + EI + + EL+ + +G ++ + + DI P + V +M
Sbjct: 116 IRSEIGKLELDQTFTARTEINELLLRELDISTDPWGVKVTRVELRDIMPSKAVLDSMELQ 175
Query: 140 NAAARLRVAANEKAEAEKILQIKRAEGEAESKYLSG--------LGIARQRQAIVDGLRD 191
A R + AA +E ++ I A+G+A+++ L L ++Q V +
Sbjct: 176 MTAERKKRAAILTSEGQRDSAINSAQGDAQARVLEAEAKKKAAILNAEAEQQKKVLEAKA 235
Query: 192 SVLGFSINVPGTT----AKDVMDMVLVTQYFDTMKEIGAASKSSAVFI 235
+ SI + A++ + +L QY + IG++ S +F+
Sbjct: 236 TAEALSILTEKLSSDNHAREALQFLLAQQYLNMGTTIGSSDSSKVMFL 283
>sp|Q58237|Y827_METJA Uncharacterized protein MJ0827 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0827 PE=3 SV=1
Length = 199
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
Query: 65 HHSHAIYDLLVNCSVIRASIPKLNLDDAFEQKNEIAKAVEEELEKAMSAYGYEIVQTLIV 124
+ +AI +L + +RA I + LD+ ++ I + E L++ A+G I + +
Sbjct: 107 DYEYAIINL--AQTTLRAIIGSMELDEVLNKREYINSKLLEILDRETDAWGVRIEKVEVK 164
Query: 125 DIEPDEHVKRAMNEINAAARLRVAANEKAEAEK 157
+I+P E +K AM + A RL+ AA +AE EK
Sbjct: 165 EIDPPEDIKNAMAQQMKAERLKRAAILEAEGEK 197
>sp|P0DKS0|QMCA_WIGBR Protein QmcA OS=Wigglesworthia glossinidia brevipalpis GN=qmcA PE=3
SV=1
Length = 313
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 94/212 (44%), Gaps = 29/212 (13%)
Query: 58 TID-ICLVHHSHA------IYDL---LVNCSV--IRASIPKLNLDDAFEQKNEIAKAVEE 105
TID IC + ++A + +L ++N ++ +R + + LD+ Q++ I +
Sbjct: 80 TIDAICFIQITNANNAAYRVSNLEIAIINLTMTNMRTVLGNMELDEMLSQRDNINIQLLN 139
Query: 106 ELEKAMSAYGYEIVQTLIVDIEPDEHVKRAMNEINAAARLRVAANEKAEAEKILQIKRAE 165
+++A +G +I + I DI P + +MN A R + A +AE + I +AE
Sbjct: 140 IVDEATKPWGVKITRVEIKDIRPPAELIESMNAQMKAERTKRADILEAEGIRQAAILKAE 199
Query: 166 GEAESKYLSGLGIARQRQAIVDGLRDSVLGFS------INVPGTTAKDVMDMV------- 212
GE +S+ L G + + +G R S S + K + D +
Sbjct: 200 GEKQSQILKAEGEKQSQILKAEGERQSEFLKSEAKERDSEAEAYSTKIISDAISSGNMNS 259
Query: 213 ----LVTQYFDTMKEIGAASKSSAVFIPHGPG 240
+ +Y + +KE+G+++ S + +P G
Sbjct: 260 IKYFIAKKYTNAIKELGSSNSSKVIMLPLNTG 291
>sp|O60121|YH77_SCHPO Uncharacterized protein C16G5.07c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC16G5.07c PE=3 SV=1
Length = 354
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 52/100 (52%)
Query: 78 SVIRASIPKLNLDDAFEQKNEIAKAVEEELEKAMSAYGYEIVQTLIVDIEPDEHVKRAMN 137
+ +R+ I +L LD ++ + + + + KA ++G ++ I DI P E V AM+
Sbjct: 147 TTMRSEIGRLTLDHVLRERQSLNIHITDAINKAAESWGIRCLRHEIRDIRPPESVVMAMH 206
Query: 138 EINAAARLRVAANEKAEAEKILQIKRAEGEAESKYLSGLG 177
+ +A R + A ++E ++ I AEG+ +++ L G
Sbjct: 207 QQVSAERQKRAEILESEGKRQAAINVAEGDKQAEILDSEG 246
>sp|P34524|BRX1_CAEEL Ribosome biogenesis protein BRX1 homolog OS=Caenorhabditis elegans
GN=K12H4.3 PE=3 SV=1
Length = 352
Score = 36.2 bits (82), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 27/37 (72%)
Query: 63 LVHHSHAIYDLLVNCSVIRASIPKLNLDDAFEQKNEI 99
LVH+ H + +L ++ + +RAS P L+ DDAF++K ++
Sbjct: 145 LVHNVHTMKELKMSGNCLRASRPVLSFDDAFDKKPQL 181
>sp|A4SYY9|HSCA_POLSQ Chaperone protein HscA homolog OS=Polynucleobacter necessarius
subsp. asymbioticus (strain DSM 18221 / CIP 109841 /
QLW-P1DMWA-1) GN=hscA PE=3 SV=1
Length = 621
Score = 35.0 bits (79), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 62/128 (48%), Gaps = 9/128 (7%)
Query: 78 SVIRASIPKLNLDDAFEQKNEIAKAVEEELEKAMSAYGYEIVQTLIVDIEPDE---HVKR 134
++++ ++PK+ D EQ E+ +V L + G+E ++++++D P VKR
Sbjct: 34 AIVQDALPKVLPD---EQGRELLPSVVRYLPNGRTQAGFEALESVVID--PKNTILSVKR 88
Query: 135 AMNE-INAAARLRVAANEKAEAEKILQIKRAEGEAESKYLSGLGIARQRQAIVDGLRDSV 193
M I+ + A + + +L+++ G+ +S +AR RQ D + D +
Sbjct: 89 FMGRGISDVENIESAPYDFVDQPGMLKLRTVAGDKSPIEVSAEILARLRQLAEDSVNDDI 148
Query: 194 LGFSINVP 201
+G I VP
Sbjct: 149 VGAVITVP 156
>sp|P63694|Y1524_MYCBO Uncharacterized protein Mb1524 OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=Mb1524 PE=3 SV=1
Length = 381
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/103 (20%), Positives = 50/103 (48%)
Query: 75 VNCSVIRASIPKLNLDDAFEQKNEIAKAVEEELEKAMSAYGYEIVQTLIVDIEPDEHVKR 134
+ + +R + + L+ +++I + L++A +G + + + I+P ++
Sbjct: 117 LTTTTLRNVVGGMTLEQTLTSRDQINAQLRGVLDEATGRWGLRVARVELRSIDPPPSIQA 176
Query: 135 AMNEINAAARLRVAANEKAEAEKILQIKRAEGEAESKYLSGLG 177
+M + A R + A AE + IK+AEG+ +++ L+ G
Sbjct: 177 SMEKQMKADREKRAMILTAEGTREAAIKQAEGQKQAQILAAEG 219
>sp|P63693|Y1488_MYCTU Uncharacterized protein Rv1488/MT1533.2 OS=Mycobacterium
tuberculosis GN=Rv1488 PE=3 SV=1
Length = 381
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/103 (20%), Positives = 50/103 (48%)
Query: 75 VNCSVIRASIPKLNLDDAFEQKNEIAKAVEEELEKAMSAYGYEIVQTLIVDIEPDEHVKR 134
+ + +R + + L+ +++I + L++A +G + + + I+P ++
Sbjct: 117 LTTTTLRNVVGGMTLEQTLTSRDQINAQLRGVLDEATGRWGLRVARVELRSIDPPPSIQA 176
Query: 135 AMNEINAAARLRVAANEKAEAEKILQIKRAEGEAESKYLSGLG 177
+M + A R + A AE + IK+AEG+ +++ L+ G
Sbjct: 177 SMEKQMKADREKRAMILTAEGTREAAIKQAEGQKQAQILAAEG 219
>sp|Q9UJZ1|STML2_HUMAN Stomatin-like protein 2 OS=Homo sapiens GN=STOML2 PE=1 SV=1
Length = 356
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 22/112 (19%)
Query: 78 SVIRASIPKLNLDDAFEQKNEIAKAVEEELEKAMSAYGYEIVQTLIVDIEPDEHVKRAMN 137
+ +R+ + KL+LD F ++ + ++ + + +A +G ++ I DI VK +M
Sbjct: 132 TTMRSELGKLSLDKVFRERESLNASIVDAINQAADCWGIRCLRYEIKDIHVPPRVKESMQ 191
Query: 138 -EINAAARLR---------------VAANEK------AEAEKILQIKRAEGE 167
++ A R R VA +K +EAEK QI +A GE
Sbjct: 192 MQVEAERRKRATVLESEGTRESAINVAEGKKQAQILASEAEKAEQINQAAGE 243
>sp|Q6G5G9|SYC_BARHE Cysteine--tRNA ligase OS=Bartonella henselae (strain ATCC 49882 /
Houston 1) GN=cysS PE=3 SV=1
Length = 503
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 98 EIAKAVEEELEKAMSAYGYEIVQTLIVDIEPDEH----VKRAMNEINAAARLRVAANEKA 153
E+ +E LEK + V + I D H KR+++E+ A AR+ VA+ ++
Sbjct: 130 EMRSLIERLLEKGHAYKAENHVLFSVSSIRNDPHYGSFAKRSLDEMRAGARVDVASYKRE 189
Query: 154 EAEKILQIKRAEGEAESKYLSGLGI 178
E + +L AEGE +G+ +
Sbjct: 190 EMDFVLWKPSAEGEPGWTSPAGIPV 214
>sp|A9IRQ9|SYC_BART1 Cysteine--tRNA ligase OS=Bartonella tribocorum (strain CIP 105476 /
IBS 506) GN=cysS PE=3 SV=1
Length = 503
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 92 AFEQKNEIAKAVEEELEKAMSAYGYEIVQTLIVDIEPDEH----VKRAMNEINAAARLRV 147
A E E+ +E LEK + + I I+ H R+++E+ A AR+ V
Sbjct: 125 ATEHLEEMRALIERLLEKGHAYKAENHILFSISSIKNPPHYGAFANRSLDEMRAGARIDV 184
Query: 148 AANEKAEAEKILQIKRAEGEAESKYLSGLGI 178
AA ++ E + +L AEGE K G+ +
Sbjct: 185 AAYKREEMDFVLWKPSAEGEPGWKSPGGIPV 215
>sp|Q32LL2|STML2_BOVIN Stomatin-like protein 2 OS=Bos taurus GN=STOML2 PE=2 SV=1
Length = 356
Score = 32.7 bits (73), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 22/112 (19%)
Query: 78 SVIRASIPKLNLDDAFEQKNEIAKAVEEELEKAMSAYGYEIVQTLIVDIEPDEHVKRAMN 137
+ +R+ + KL+LD F ++ + ++ + + +A +G ++ I DI VK +M
Sbjct: 132 TTMRSELGKLSLDKVFRERESLNASIVDAINQAADCWGIRCLRYEIKDIHVPPRVKESMK 191
Query: 138 -EINAAARLR---------------VAANEK------AEAEKILQIKRAEGE 167
++ A R R VA +K +EAEK QI +A GE
Sbjct: 192 MQVEAERRKRATVLESEGTRESAINVAEGKKQAQILASEAEKAEQINQAAGE 243
>sp|A8MLW8|MURB_ALKOO UDP-N-acetylenolpyruvoylglucosamine reductase OS=Alkaliphilus
oremlandii (strain OhILAs) GN=murB PE=3 SV=2
Length = 304
Score = 32.3 bits (72), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
Query: 162 KRAEGEAESKYLSGLGIARQRQAIVDGLRDSVL--GFSINVPGTTAKDVMDMV 212
KR EG K + G+ QR V G + S L GF +NV TAKDV+D++
Sbjct: 230 KRPEGYFAGKLIQDSGLKGQR---VGGAQVSELHSGFIVNVGDATAKDVLDLI 279
>sp|B1XTR3|HSCA_POLNS Chaperone protein HscA homolog OS=Polynucleobacter necessarius
subsp. necessarius (strain STIR1) GN=hscA PE=3 SV=1
Length = 621
Score = 32.3 bits (72), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 62/128 (48%), Gaps = 9/128 (7%)
Query: 78 SVIRASIPKLNLDDAFEQKNEIAKAVEEELEKAMSAYGYEIVQTLIVDIEPDE---HVKR 134
+++R ++PK+ L DA Q E+ +V L + G+E ++++++D P VKR
Sbjct: 34 AIVRDALPKV-LPDA--QGRELLPSVIRYLPNGRTQAGFEALESVVID--PKNTIVSVKR 88
Query: 135 AMNE-INAAARLRVAANEKAEAEKILQIKRAEGEAESKYLSGLGIARQRQAIVDGLRDSV 193
M + + A + + +L+++ G+ +S +AR RQ D + D +
Sbjct: 89 FMGRGLLDVEHIESAPYDFVDQPGMLKLRTVAGDKSPIEVSAEILARLRQLAEDSVSDEI 148
Query: 194 LGFSINVP 201
+G I VP
Sbjct: 149 VGAVITVP 156
>sp|P40961|PHB1_YEAST Prohibitin-1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PHB1 PE=1 SV=2
Length = 287
Score = 32.3 bits (72), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 81/182 (44%), Gaps = 19/182 (10%)
Query: 23 VPW-------HIRQMMLSINSATQGLKFRPMSLMVKYIYLFKTIDICLVHHSHAI-YDLL 74
VPW +R SI + T + +SL ++ ++ + + + ++ + + YD
Sbjct: 60 VPWLQKAIIYDVRTKPKSIATNTGTKDLQMVSLTLRVLHRPEVLQLPAIYQNLGLDYDER 119
Query: 75 VNCS----VIRASIPKLNLDDAFEQKNEIAKAVEEELEKAMSAYGYEIVQTLIVDIEPDE 130
V S V+++ + + + + Q+ I++ + +EL + +G ++ I +
Sbjct: 120 VLPSIGNEVLKSIVAQFDAAELITQREIISQKIRKELSTRANEFGIKLEDVSITHMTFGP 179
Query: 131 HVKRAMNEINAAARLRVAAN---EKAEAEKILQIKRAEGEAESKYLSGLGIARQRQAIVD 187
+A+ + A + A EKAE E+ + RAEGEAES +A+ + D
Sbjct: 180 EFTKAVEQKQIAQQDAERAKFLVEKAEQERQASVIRAEGEAESAEFISKALAK----VGD 235
Query: 188 GL 189
GL
Sbjct: 236 GL 237
>sp|Q99JB2|STML2_MOUSE Stomatin-like protein 2 OS=Mus musculus GN=Stoml2 PE=1 SV=1
Length = 353
Score = 32.3 bits (72), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 22/112 (19%)
Query: 78 SVIRASIPKLNLDDAFEQKNEIAKAVEEELEKAMSAYGYEIVQTLIVDIEPDEHVKRAMN 137
+ +R+ + KL+LD F ++ + + + + +A +G ++ I DI VK +M
Sbjct: 132 TTMRSELGKLSLDKVFRERESLNANIVDAINQAADCWGIRCLRYEIKDIHVPPRVKESMQ 191
Query: 138 -EINAAARLR---------------VAANEK------AEAEKILQIKRAEGE 167
++ A R R VA +K +EAEK QI +A GE
Sbjct: 192 MQVEAERRKRATVLESEGTRESAINVAEGKKQAQILASEAEKAEQINQAAGE 243
>sp|O28852|Y1420_ARCFU Uncharacterized protein AF_1420 OS=Archaeoglobus fulgidus (strain
ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=AF_1420 PE=3 SV=1
Length = 249
Score = 32.3 bits (72), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 49/93 (52%), Gaps = 11/93 (11%)
Query: 78 SVIRASIPKLNLDDAFEQKNEIAKAVEEELEKAMSAYGYEIVQTLIVDIEPDEHVKRAMN 137
+ +R+ I + LD+ +++++ +++ +++ + +G ++ I D+E E ++R M
Sbjct: 113 TTLRSIIGQAELDEVLSERDKLNVKLQQIIDEETNPWGIKVTAVEIKDVELPEEMRRIM- 171
Query: 138 EINAAARLRVAANEKAEAEKILQIKRAEGEAES 170
A +AE E+ +I RAEGE ++
Sbjct: 172 ----------AMQAEAERERRSKIIRAEGEYQA 194
>sp|Q4FZT0|STML2_RAT Stomatin-like protein 2 OS=Rattus norvegicus GN=Stoml2 PE=1 SV=1
Length = 353
Score = 32.3 bits (72), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 22/112 (19%)
Query: 78 SVIRASIPKLNLDDAFEQKNEIAKAVEEELEKAMSAYGYEIVQTLIVDIEPDEHVKRAMN 137
+ +R+ + KL+LD F ++ + + + + +A +G ++ I DI VK +M
Sbjct: 132 TTMRSELGKLSLDKVFRERESLNANIVDAINQAADCWGIRCLRYEIKDIHVPPRVKESMQ 191
Query: 138 -EINAAARLR---------------VAANEK------AEAEKILQIKRAEGE 167
++ A R R VA +K +EAEK QI +A GE
Sbjct: 192 MQVEAERRKRATVLESEGTRESAINVAEGKKQAQILASEAEKAEQINQAAGE 243
>sp|Q7TN88|PK1L2_MOUSE Polycystic kidney disease protein 1-like 2 OS=Mus musculus
GN=Pkd1l2 PE=2 SV=1
Length = 2461
Score = 32.0 bits (71), Expect = 4.4, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 59/137 (43%), Gaps = 18/137 (13%)
Query: 71 YDLLVNCSVIRASIPKLNLDDA-----FEQKNEIAKAVEEELEKAMSAYGYEIVQTLIVD 125
+DL+VN SV R ++ +L + A F Q+ E A+ A G T +V
Sbjct: 468 WDLVVNVSVARGTLEELTFEVAGLNANFSQEEESVGQSSGNYHVAVPAEG-----TFLVT 522
Query: 126 IEPDEHVKRAMNEINAAARLRVAANEKAEAEKILQIKRAEGEAESKYLSGLGIARQRQAI 185
+ HV+ A +E++ L + + + ++ EA+S + + + + +
Sbjct: 523 V----HVRNAFSELS----LDIGNITVTASSSLQELSGINAEAKSGHKQDMKVFTEPELY 574
Query: 186 VDGLRDSVLGFSINVPG 202
VD + LG+ + PG
Sbjct: 575 VDPFTEVTLGWPDDDPG 591
>sp|B0TXH8|RNC_FRAP2 Ribonuclease 3 OS=Francisella philomiragia subsp. philomiragia
(strain ATCC 25017) GN=rnc PE=3 SV=1
Length = 230
Score = 32.0 bits (71), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 84 IPKLNLDDAFEQKNEIAKAVEEELEKAMSAYGYEIVQTLIVDIEPDEHVKRAMNEINAAA 143
I LNLDD + K+ +K E L+ +S Y I D E + VK N++N
Sbjct: 141 ISTLNLDDV-KVKDSKSKLQEILLQNGLSLPEYSIETIDGKDHEQEFTVKALSNDLNIEV 199
Query: 144 RLRVAANEKAE---AEKILQIKRAEGEAESK 171
R + + +KAE AEK++QI +G E K
Sbjct: 200 RAKGTSRKKAEQKAAEKMIQILSQQGLHEKK 230
>sp|Q5JJ31|SYI_PYRKO Isoleucine--tRNA ligase OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=ileS PE=3 SV=1
Length = 1065
Score = 31.6 bits (70), Expect = 6.7, Method: Composition-based stats.
Identities = 39/141 (27%), Positives = 62/141 (43%), Gaps = 37/141 (26%)
Query: 49 MVKYIYLFKTIDICL-------VHHSHAIYDLLVNCSVIRASIPKLNLDDAFEQKNEIAK 101
+ Y ++K D+ L + + IY L+ V S+ L+ +A E K
Sbjct: 771 LAAYYTVWKVFDVLLRLMAPFTPYIAEEIYQNLIRPFVGVESVHMLDWPEADE------K 824
Query: 102 AVEEELEKAMSAYGYEIVQT------------------LIVDIEPDEHVKRAMNEINAAA 143
A++EELEK M Y +IV+ +I++ E DE VK+A+ IN
Sbjct: 825 AIDEELEKEME-YARKIVEAGSSARQKARIKLRYPVRRIIIETE-DETVKKAVERINRIL 882
Query: 144 RLRVAANE----KAEAEKILQ 160
R ++ A E K E E I++
Sbjct: 883 RDQLNAKEVVVGKVERELIIK 903
>sp|Q54GI9|PHB1_DICDI Prohibitin-1, mitochondrial OS=Dictyostelium discoideum GN=phbA
PE=3 SV=1
Length = 271
Score = 30.8 bits (68), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 74/176 (42%), Gaps = 31/176 (17%)
Query: 23 VPWHIRQMMLSINSATQGLKFRPMSLMVKYIYLFKTIDICL---VHHSHAIYDLL----- 74
+PW + ++ I S+ + +K S ++ + + T+ + V H +I+ L
Sbjct: 57 MPWLQKPIIFDIRSSPRNIKSDTGSKDLQTVSV--TVRVLFRPDVEHLPSIFSKLGLDYD 114
Query: 75 ------VNCSVIRASIPKLNLDDAFEQKNEIAKAVEEELEKAMSAYGYEIVQTLIVDIEP 128
+ V+++ + + + + Q+ ++K + E L K + L++D
Sbjct: 115 ERILPSLGNEVLKSVVAQYDATELITQREVVSKEIRESLMKRAKEF------NLLLDDVS 168
Query: 129 DEHVKRAMNEINAAARLRVAANE---------KAEAEKILQIKRAEGEAESKYLSG 175
H+ + + NA +VA E K E EK I RAEGEAE+ L G
Sbjct: 169 ITHLSFSQDFTNAIEHKQVAQQEAERSKYIVMKNEQEKKANIIRAEGEAEAAKLIG 224
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.134 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,050,307
Number of Sequences: 539616
Number of extensions: 3100021
Number of successful extensions: 12218
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 84
Number of HSP's that attempted gapping in prelim test: 12170
Number of HSP's gapped (non-prelim): 119
length of query: 260
length of database: 191,569,459
effective HSP length: 115
effective length of query: 145
effective length of database: 129,513,619
effective search space: 18779474755
effective search space used: 18779474755
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)