BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024968
(260 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q07G10|ALKB8_XENTR Alkylated DNA repair protein alkB homolog 8 OS=Xenopus tropicalis
GN=alkbh8 PE=2 SV=2
Length = 628
Score = 84.0 bits (206), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 104/222 (46%), Gaps = 44/222 (19%)
Query: 59 GLCLCRDFLSPEEQSYLLSAIQNEGWFTDTSHNQVMRFGDLPMWATKLSDSIREEVLLSD 118
GL + DF+SPE++ +L +I W ++TS + ++ + + + + +
Sbjct: 137 GLIIVEDFVSPEQERTMLESID---WDSETSSQKSLKHRQVKHYGYEFR---YDNNNVDK 190
Query: 119 DLPINDGDKDVCI------LPSDLLWREPLFDQLIVNVYQPGEGICPHVDLMR-FEDGIA 171
D P+ G D C + L+ +P DQL +N Y+PG+GI PHVD FED I
Sbjct: 191 DKPLPGGLPDFCTEALRKCVQRGLIKHDP--DQLTINQYEPGQGIPPHVDTHSAFEDEIL 248
Query: 172 IVSLESSCVMHFTQVKEASATGEGRIDNPHAVKIPVYLTPGSLVIMSREARYLWKHEINR 231
+SL + VM F +P+ +PV L SL+IMS E+RYLW H I
Sbjct: 249 SLSLGAEIVMDF--------------KHPNGSVVPVMLPQRSLLIMSGESRYLWTHGITP 294
Query: 232 KQG--FQMWEGEVL-------------NQKKRTSITMRKLCH 258
++ Q+ EG+ + + RTS T RK+ H
Sbjct: 295 RKFDVIQVSEGQTVGTISGNSGELTLSKRSTRTSFTFRKVRH 336
>sp|Q5UR03|YL905_MIMIV Uncharacterized protein L905 OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_L905 PE=4 SV=1
Length = 210
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 101/225 (44%), Gaps = 44/225 (19%)
Query: 45 VSQKSSWQRFEEIGGLCLCRDFLSPEEQSYLLSAIQNEGWFTD--------TSHNQVMRF 96
+S+K +R + + G + D+++P+++ LL I W D N++
Sbjct: 1 MSKKFKMKRAKNLNGFSIIHDYVTPDQEKKLLKKINESEWVVDYQRRLQYYNYRNELFEP 60
Query: 97 GDL---PMWATKLSDSIREEVLLSDDLPINDGDKDVCILPSDLLWREPLFDQLIVNVYQP 153
DL P K D + +++L DK + P DQ+IVN Y+P
Sbjct: 61 YDLIPIPNKIPKYLDQLINQMIL---------DKIIDQKP----------DQIIVNEYKP 101
Query: 154 GEGICPHVDLMRFEDGIAI-VSLESSCVMHFTQVKEASATGEGRIDNPHAVKIPVYLTPG 212
GEG+ PH D + + I +SL S +M F + K P K +Y+ P
Sbjct: 102 GEGLKPHFDRKDYYQNVIIGLSLGSGTIMEFYKNK------------PIPEKKKIYIPPR 149
Query: 213 SLVIMSREARYLWKHEINRKQGFQMWEGEVLNQKKRTSITMRKLC 257
SL I+ +ARY+WKH I ++ + G+ + ++ R SIT R +
Sbjct: 150 SLYIIKDDARYIWKHGIPPRK-YDEINGKKIPRETRISITFRNVI 193
>sp|Q9UT12|YLW2_SCHPO Uncharacterized protein P8A3.02c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAP8A3.02c PE=3 SV=1
Length = 225
Score = 74.7 bits (182), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 72/132 (54%), Gaps = 19/132 (14%)
Query: 132 LPSDL---LWREPLFDQLIVNVYQPGEGICPHVDLMRFEDGIAIVSLESSCVMHFTQVKE 188
+PSD LW+ + +I+ VY PG+GI PH DL F DG+AI S S+ M FT +
Sbjct: 101 IPSDFKQRLWKGQDAEAIIMQVYNPGDGIIPHKDLEMFGDGVAIFSFLSNTTMIFTHPE- 159
Query: 189 ASATGEGRIDNPHAVKIPVYLTPGSLVIMSREARYLWKHEINRKQG-FQMWEGEV--LNQ 245
+K + L GSL++MS ARY W HEI + G + M +GE +++
Sbjct: 160 ------------LKLKSKIRLEKGSLLLMSGTARYDWFHEIPFRAGDWVMNDGEEKWVSR 207
Query: 246 KKRTSITMRKLC 257
+R S+TMR++
Sbjct: 208 SQRLSVTMRRII 219
>sp|A1A4L5|ALKB8_BOVIN Alkylated DNA repair protein alkB homolog 8 OS=Bos taurus GN=ALKBH8
PE=2 SV=1
Length = 664
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 106/247 (42%), Gaps = 62/247 (25%)
Query: 44 NVSQKSSWQRFEEIG------GLCLCRDFLSPEEQSYLLSAI------QNEGWFTDTSHN 91
N +K+ W+ E+G GL + + +S E++ LL ++ +N+ + H
Sbjct: 118 NFVEKAQWK---ELGLQALPPGLKVIEEIISSEDEKMLLESVNWTEDTENQNFQKSLKHR 174
Query: 92 QVMRFGDLPMWATKLSDSIREEVLLSDDLPINDGDKDVC------ILPSDLLWREPLFDQ 145
+V FG + D D P+ G D+C L + +P DQ
Sbjct: 175 RVKHFGYEFHYENNNVDK---------DKPLPGGLPDICESILEKWLKEGFIKHKP--DQ 223
Query: 146 LIVNVYQPGEGICPHVDLMR-FEDGIAIVSLESSCVMHFTQVKEASATGEGRIDNPHAVK 204
L +N Y+PG GI H+D FED I +SL S VM F +P +
Sbjct: 224 LTINQYEPGHGIPAHIDTHSAFEDEIISLSLGSEIVMDF--------------KHPDGMT 269
Query: 205 IPVYLTPGSLVIMSREARYLWKHEINRKQ--GFQMWEGE------------VLNQKK-RT 249
+PV L SL++M+ E+RYLW H I ++ Q +G LN++ RT
Sbjct: 270 VPVMLPCRSLLVMTGESRYLWTHGITPRKFDTVQASKGHKSGIITSDVEDLTLNKRGIRT 329
Query: 250 SITMRKL 256
S T RK+
Sbjct: 330 SFTFRKV 336
>sp|Q80Y20|ALKB8_MOUSE Alkylated DNA repair protein alkB homolog 8 OS=Mus musculus
GN=Alkbh8 PE=2 SV=1
Length = 664
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 84/196 (42%), Gaps = 43/196 (21%)
Query: 81 NEGWFTDTSHNQVMRFGDLPMWATKLSDSIREEVLLSDDLPINDGDKDVCILPSDLLWRE 140
N+ + H +V FG + + D D P+ G +VC + L +E
Sbjct: 164 NQNFQRSLKHRRVKHFGYEFHYESNTVD---------KDKPLPGGLPEVCSSILEKLLKE 214
Query: 141 PLF----DQLIVNVYQPGEGICPHVDLMR-FEDGIAIVSLESSCVMHFTQVKEASATGEG 195
DQL +N Y+PG GI H+D FED I +SL S+ VM F
Sbjct: 215 GYIKHKPDQLTINQYEPGHGIPAHIDTHSAFEDEIISLSLGSAIVMDF------------ 262
Query: 196 RIDNPHAVKIPVYLTPGSLVIMSREARYLWKHEINRK-----QGFQMWEGEVLN------ 244
+P V + V L SL++M+ E+RYLW H I + Q + ++G ++
Sbjct: 263 --KHPEGVTVQVMLPRRSLLVMTGESRYLWTHGITPRKFDTVQASEQFKGGIITSDIGDL 320
Query: 245 ----QKKRTSITMRKL 256
+ RTS T RK+
Sbjct: 321 TLSKRGMRTSFTFRKV 336
>sp|Q95K79|ALKB8_MACFA Alkylated DNA repair protein alkB homolog 8 OS=Macaca fascicularis
GN=ALKBH8 PE=2 SV=1
Length = 664
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 72/158 (45%), Gaps = 34/158 (21%)
Query: 119 DLPINDGDKDVCILPSDLLWREPLF----DQLIVNVYQPGEGICPHVDLMR-FEDGIAIV 173
D P+ G D+C + RE DQ+ +N Y+PG+GI H+D FED I +
Sbjct: 193 DKPLPGGLPDICDSFLEKWLREGYIKHKPDQMTINQYEPGQGIPAHIDTHSAFEDEIVSL 252
Query: 174 SLESSCVMHFTQVKEASATGEGRIDNPHAVKIPVYLTPGSLVIMSREARYLWKHEI---- 229
SL S VM F +P +PV L SL++M+ E+RYLW H I
Sbjct: 253 SLGSEIVMDF--------------KHPDGTAVPVMLPRRSLLVMTGESRYLWTHGITCRK 298
Query: 230 --------NRKQGFQMWE-GEVLNQKK--RTSITMRKL 256
N K G + G++ K+ RTS T RK+
Sbjct: 299 FDTVQASENHKSGIITSDVGDLTLSKRGLRTSFTFRKV 336
>sp|Q96BT7|ALKB8_HUMAN Alkylated DNA repair protein alkB homolog 8 OS=Homo sapiens
GN=ALKBH8 PE=1 SV=2
Length = 664
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 59/118 (50%), Gaps = 23/118 (19%)
Query: 119 DLPINDGDKDVC------ILPSDLLWREPLFDQLIVNVYQPGEGICPHVDLMR-FEDGIA 171
D P++ G D+C L + +P DQ+ +N Y+PG+GI H+D FED I
Sbjct: 193 DKPLSGGLPDICESFLEKWLRKGYIKHKP--DQMTINQYEPGQGIPAHIDTHSAFEDEIV 250
Query: 172 IVSLESSCVMHFTQVKEASATGEGRIDNPHAVKIPVYLTPGSLVIMSREARYLWKHEI 229
+SL S VM F +P + +PV L SL++M+ E+RYLW H I
Sbjct: 251 SLSLGSEIVMDF--------------KHPDGIAVPVMLPRRSLLVMTGESRYLWTHGI 294
>sp|Q8K2U2|ALKB6_MOUSE Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 OS=Mus
musculus GN=Alkbh6 PE=2 SV=2
Length = 235
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 92/219 (42%), Gaps = 41/219 (18%)
Query: 65 DFLSPEEQSYLLSAIQN--EGWFTDTSHNQVMRFGDLP----MWATKLSDSIREEVLLSD 118
DF+S EE+ YLL + N + +T S ++ +G LP M +L ++ V
Sbjct: 28 DFISKEEEEYLLRQVFNAPKPKWTQLSGRKLQNWGGLPHPRGMVPERLPPWLQRYVDKVS 87
Query: 119 DLPINDGDKDVCILPSDLLWREPLFDQLIVNVYQPGEGICPHVDLMRFEDGIAIVSLESS 178
DL + G LP++ ++VN Y PGEGI PH D + ++ +SL S
Sbjct: 88 DLSLFGG------LPAN---------HVLVNQYLPGEGIMPHEDGPLYYPTVSTISLGSH 132
Query: 179 CVMHFTQVKEASATGEGRIDNPHAVKIPV---YLTPGSLVIMSREARYLWKHEI------ 229
V+ F + ++ + ++ P + P+ + P SL+++ A H I
Sbjct: 133 TVLDFYEPRQPD--DDVPMEQPRPPQRPITSLLVEPRSLLVLRGTAYTRLLHGISATRVD 190
Query: 230 ---------NRKQGFQMWEGEVLNQKKRTSITMRKLCHV 259
N G L + R S+T+R++ V
Sbjct: 191 ELDATSLPPNATACKSALPGAHLVRGTRVSLTIRRVPRV 229
>sp|Q3KRA9|ALKB6_HUMAN Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 OS=Homo
sapiens GN=ALKBH6 PE=1 SV=2
Length = 238
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 21/130 (16%)
Query: 65 DFLSPEEQSYLLSAIQN--EGWFTDTSHNQVMRFGDLP----MWATKLSDSIREEVLLSD 118
DF+S EE+ YLL + N + +T S ++ +G LP M +L ++ V
Sbjct: 28 DFISKEEEEYLLRQVFNAPKPKWTQLSGRKLQNWGGLPHPRGMVPERLPPWLQRYVDKVS 87
Query: 119 DLPINDGDKDVCILPSDLLWREPLFDQLIVNVYQPGEGICPHVDLMRFEDGIAIVSLESS 178
+L + G LP++ ++VN Y PGEGI PH D + ++ +SL S
Sbjct: 88 NLSLFGG------LPAN---------HVLVNQYLPGEGIMPHEDGPLYYPTVSTISLGSH 132
Query: 179 CVMHFTQVKE 188
V+ F + +
Sbjct: 133 TVLDFYEPRR 142
>sp|Q9D6Z0|ALKB7_MOUSE Alpha-ketoglutarate-dependent dioxygenase alkB homolog 7 OS=Mus
musculus GN=Alkbh7 PE=2 SV=1
Length = 221
Score = 37.7 bits (86), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 47/106 (44%), Gaps = 14/106 (13%)
Query: 152 QPGEGICPHVDLMRF-EDGIAIVSLESSCVMHFTQVKEASATGEGRIDNPHAVKIPVYLT 210
+P I PHVD ++F IA +SL S VM +E E + L
Sbjct: 113 EPRGYIKPHVDSVKFCGSTIAGLSLLSPSVMKLVHTQEPEQWLE------------LLLE 160
Query: 211 PGSLVIMSREARYLWKHEINRKQGFQMWEGEVLNQKKRTSITMRKL 256
PGSL I+ ARY + HEI R + E V + +R S+ R L
Sbjct: 161 PGSLYILRGSARYDFSHEILRDEESFFGEHRV-PRGRRISVICRSL 205
>sp|Q2M2S8|ALKB7_BOVIN Alpha-ketoglutarate-dependent dioxygenase alkB homolog 7 OS=Bos
taurus GN=ALKBH7 PE=2 SV=1
Length = 221
Score = 37.4 bits (85), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 50/107 (46%), Gaps = 16/107 (14%)
Query: 152 QPGEGICPHVDLMRF-EDGIAIVSLESSCVMHFTQVKEASATGEGRIDNPHAVKIPVYLT 210
+P I PHVD ++F IA +SL S VM +E E + L
Sbjct: 113 EPQGYIKPHVDSIKFCGSTIAGLSLLSPSVMRLVHTQEPGEWLE------------LLLE 160
Query: 211 PGSLVIMSREARYLWKHEINRKQGFQMWEGE-VLNQKKRTSITMRKL 256
PGSL I+ ARY + HEI R + + + GE + + +R S+ R L
Sbjct: 161 PGSLYILRGSARYDFSHEILRDE--ESFFGERRIPRGRRISVICRSL 205
>sp|Q9BT30|ALKB7_HUMAN Alpha-ketoglutarate-dependent dioxygenase alkB homolog 7 OS=Homo
sapiens GN=ALKBH7 PE=2 SV=1
Length = 221
Score = 37.4 bits (85), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 48/102 (47%), Gaps = 16/102 (15%)
Query: 157 ICPHVDLMRFEDG-IAIVSLESSCVMHFTQVKEASATGEGRIDNPHAVKIPVYLTPGSLV 215
I PHVD ++F IA +SL S VM +E E + L PGSL
Sbjct: 118 IKPHVDSIKFCGATIAGLSLLSPSVMRLVHTQEPGEWLE------------LLLEPGSLY 165
Query: 216 IMSREARYLWKHEINRKQGFQMWEGE-VLNQKKRTSITMRKL 256
I+ ARY + HEI R + + + GE + + +R S+ R L
Sbjct: 166 ILRGSARYDFSHEILRDE--ESFFGERRIPRGRRISVICRSL 205
>sp|Q6IQE9|ALKB6_DANRE Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 OS=Danio
rerio GN=alkbh6 PE=2 SV=1
Length = 234
Score = 37.0 bits (84), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 21/125 (16%)
Query: 65 DFLSPEEQSYLLSAIQN--EGWFTDTSHNQVMRFGDLP----MWATKLSDSIREEVLLSD 118
DF+S E+ +LL + + +T S ++ +G LP M A KL D + E
Sbjct: 28 DFISEAEEEFLLQQVYRAPKPKWTQLSGRRLQNWGGLPNPKGMLAEKLPDWLLEYTEKIS 87
Query: 119 DLPINDGDKDVCILPSDLLWREPLFDQLIVNVYQPGEGICPHVDLMRFEDGIAIVSLESS 178
L G + ++VN Y+PGEGI PH D + + +++ S
Sbjct: 88 ALGAFAGKTA---------------NHVLVNEYKPGEGIMPHEDGPLYHPTVTTITVGSH 132
Query: 179 CVMHF 183
++ F
Sbjct: 133 TLLDF 137
>sp|Q9SA98|ALKBH_ARATH Alpha-ketoglutarate-dependent dioxygenase alkB OS=Arabidopsis
thaliana GN=At1g11780 PE=2 SV=2
Length = 345
Score = 35.8 bits (81), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 10/76 (13%)
Query: 147 IVNVYQPGEGICPHVDLMRFEDGIAIVSLESSCVMHFTQVKEASATGEGRIDNPHAVKIP 206
IVN + G+ + H+D M + IVS+ C F G+ + D PHA
Sbjct: 230 IVNYFGIGDTLGGHLDDMEADWSKPIVSMSLGCKAIFL------LGGKSKDDPPHA---- 279
Query: 207 VYLTPGSLVIMSREAR 222
+YL G +V+M+ EAR
Sbjct: 280 MYLRSGDVVLMAGEAR 295
>sp|Q5PQ59|ALKB6_XENLA Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 OS=Xenopus
laevis GN=alkbh6 PE=2 SV=1
Length = 240
Score = 34.3 bits (77), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 83/226 (36%), Gaps = 64/226 (28%)
Query: 65 DFLSPEEQSYLLSAIQN--------------EGWFTDTSHNQVMRFGDLPMWATKLSDSI 110
+++S E+ YLL + N + W H++ M LP W K +D I
Sbjct: 27 EYISKSEEEYLLRQVYNAPKPKWTQLSGRKLQNW-GGLPHSRGMVQEKLPSWLQKYTDQI 85
Query: 111 REEVLLSDDLPINDGDKDVCILPSDLLWREPLFDQLIVNVYQPGEGICPHVDLMRFEDGI 170
+ GD + ++VN Y GEGI PH D + +
Sbjct: 86 SSLGVF--------GDHSA--------------NHVLVNEYNAGEGIMPHEDGPMYYPTV 123
Query: 171 AIVSLESSCVMHF----------TQVKEASATGEGRIDNPHAVKIPVYLTPGSLVIMSRE 220
+SL S ++ F TQ ++ A+ E + H + + L P SL+++ E
Sbjct: 124 TTISLGSHTLLDFYVPINKECQETQNQDKVASTE---EQRHMLSL--LLEPRSLLVVREE 178
Query: 221 ARYLWKHEINRKQGFQM------------WEGEVLNQKKRTSITMR 254
+ H I + + G+ L + R S+T+R
Sbjct: 179 LYTSYLHGICPRTSDTLSPMVANLGNSTAHAGDTLQRGTRVSLTIR 224
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,932,318
Number of Sequences: 539616
Number of extensions: 4354934
Number of successful extensions: 17958
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 17894
Number of HSP's gapped (non-prelim): 57
length of query: 260
length of database: 191,569,459
effective HSP length: 115
effective length of query: 145
effective length of database: 129,513,619
effective search space: 18779474755
effective search space used: 18779474755
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)