Your job contains 1 sequence.
>024969
MKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQ
IQKFRDELKNRSRVLKKLGHINADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHH
QVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTV
RPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKK
FAAASESLRRGIMFSNSLYL
The BLAST search returned 8 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 024969
(260 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2063648 - symbol:HEN2 "hua enhancer 2" species... 1152 6.2e-117 1
FB|FBgn0001986 - symbol:l(2)35Df "lethal (2) 35Df" specie... 598 2.3e-57 1
RGD|1305984 - symbol:Skiv2l2 "superkiller viralicidic act... 589 2.8e-57 1
MGI|MGI:1919448 - symbol:Skiv2l2 "superkiller viralicidic... 592 9.7e-57 1
UNIPROTKB|F5H7E2 - symbol:SKIV2L2 "Superkiller viralicidi... 588 1.6e-56 1
UNIPROTKB|P42285 - symbol:SKIV2L2 "Superkiller viralicidi... 588 2.6e-56 1
UNIPROTKB|E2RCI5 - symbol:SKIV2L2 "Uncharacterized protei... 587 3.4e-56 1
ZFIN|ZDB-GENE-040426-2854 - symbol:skiv2l2 "superkiller v... 579 2.4e-55 1
UNIPROTKB|F1SLL6 - symbol:SKIV2L2 "Uncharacterized protei... 575 6.9e-55 1
UNIPROTKB|F1N993 - symbol:F1N993 "Uncharacterized protein... 561 2.1e-53 1
POMBASE|SPAC6F12.16c - symbol:mtr4 "ATP-dependent RNA hel... 549 5.5e-52 1
UNIPROTKB|D4AE49 - symbol:D4AE49 "Uncharacterized protein... 525 2.7e-50 1
SGD|S000003586 - symbol:MTR4 "ATP-dependent 3'-5' RNA hel... 531 4.2e-50 1
TAIR|locus:2026001 - symbol:MTR4 "homolog of yeast MTR4" ... 525 1.4e-49 1
WB|WBGene00012342 - symbol:mtr-4 species:6239 "Caenorhabd... 525 1.6e-49 1
UNIPROTKB|F1MAH7 - symbol:F1MAH7 "Uncharacterized protein... 525 1.7e-49 1
ASPGD|ASPL0000070749 - symbol:mtr4 species:162425 "Emeric... 502 5.5e-47 1
DICTYBASE|DDB_G0275633 - symbol:DDB_G0275633 "superkiller... 500 1.0e-46 1
CGD|CAL0003794 - symbol:orf19.1335 species:5476 "Candida ... 454 8.4e-42 1
UNIPROTKB|G4NH56 - symbol:MGG_03931 "FRQ-interacting RNA ... 436 7.1e-40 1
POMBASE|SPAC17H9.02 - symbol:SPAC17H9.02 "TRAMP complex A... 435 7.8e-40 1
TAIR|locus:2075566 - symbol:AT3G46960 species:3702 "Arabi... 376 2.7e-33 1
ZFIN|ZDB-GENE-010430-5 - symbol:skiv2l "superkiller viral... 367 2.1e-32 1
DICTYBASE|DDB_G0277211 - symbol:DDB_G0277211 "superkiller... 338 3.1e-29 1
POMBASE|SPCC550.03c - symbol:SPCC550.03c "Ski complex RNA... 337 3.3e-29 1
ASPGD|ASPL0000004985 - symbol:AN6007 species:162425 "Emer... 326 5.4e-28 1
UNIPROTKB|F5H6Y7 - symbol:SKIV2L "Helicase SKI2W" species... 304 5.3e-27 2
UNIPROTKB|F5H7B0 - symbol:SKIV2L "Helicase SKI2W" species... 304 9.9e-27 2
UNIPROTKB|F8VS23 - symbol:SKIV2L "Helicase SKI2W" species... 304 9.9e-27 2
UNIPROTKB|B4DM01 - symbol:SKIV2L "cDNA FLJ57529, highly s... 304 1.1e-26 2
UNIPROTKB|F8VNU1 - symbol:SKIV2L "Helicase SKI2W" species... 304 1.1e-26 2
GENEDB_PFALCIPARUM|PFF0100w - symbol:PFF0100w "putative A... 313 1.4e-26 1
UNIPROTKB|Q15477 - symbol:SKIV2L "Helicase SKI2W" species... 304 1.7e-26 2
CGD|CAL0002171 - symbol:orf19.6425 species:5476 "Candida ... 310 2.6e-26 1
UNIPROTKB|E2RSD6 - symbol:SKIV2L "Uncharacterized protein... 310 2.6e-26 1
UNIPROTKB|F1RQW4 - symbol:SKIV2L "Uncharacterized protein... 305 8.8e-26 1
UNIPROTKB|F1LP39 - symbol:Skiv2l "Protein Skiv2l" species... 304 1.1e-25 1
RGD|1303059 - symbol:Skiv2l "superkiller viralicidic acti... 304 1.1e-25 1
UNIPROTKB|E1BMS0 - symbol:LOC100139548 "Uncharacterized p... 304 1.1e-25 1
UNIPROTKB|F1MJX4 - symbol:SKIV2L2 "Uncharacterized protei... 295 6.5e-25 1
SGD|S000004390 - symbol:SKI2 "Ski complex component and p... 274 1.9e-22 1
FB|FBgn0039117 - symbol:tst "twister" species:7227 "Droso... 250 7.7e-21 2
WB|WBGene00008502 - symbol:skih-2 species:6239 "Caenorhab... 236 2.1e-18 1
UNIPROTKB|H7C4L3 - symbol:SKIV2L "Helicase SKI2W" species... 193 2.6e-15 1
UNIPROTKB|H0YAC4 - symbol:SKIV2L2 "Superkiller viralicidi... 192 3.3e-15 1
UNIPROTKB|H9L343 - symbol:H9L343 "Uncharacterized protein... 99 8.9e-05 1
>TAIR|locus:2063648 [details] [associations]
symbol:HEN2 "hua enhancer 2" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0010093
"specification of floral organ identity" evidence=IMP] [GO:0016070
"RNA metabolic process" evidence=TAS] [GO:0005829 "cytosol"
evidence=IDA] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=RCA]
[GO:0003002 "regionalization" evidence=RCA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=RCA] [GO:0006396 "RNA
processing" evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0009845
"seed germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010090 "trichome morphogenesis"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0019915 "lipid
storage" evidence=RCA] [GO:0030422 "production of siRNA involved in
RNA interference" evidence=RCA] [GO:0033043 "regulation of
organelle organization" evidence=RCA] [GO:0035196 "production of
miRNAs involved in gene silencing by miRNA" evidence=RCA]
[GO:0043687 "post-translational protein modification" evidence=RCA]
[GO:0045010 "actin nucleation" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA] [GO:0050826
"response to freezing" evidence=RCA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GO:GO:0003676 GO:GO:0010093
GO:GO:0016070 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:AC005171 GO:GO:0003724 HOGENOM:HOG000163047
KO:K12598 InterPro:IPR025696 Pfam:PF13234 EMBL:BT005794
IPI:IPI00539432 PIR:B84481 RefSeq:NP_565338.1 UniGene:At.20667
ProteinModelPortal:Q9ZVW2 SMR:Q9ZVW2 IntAct:Q9ZVW2 PRIDE:Q9ZVW2
EnsemblPlants:AT2G06990.1 GeneID:815269 KEGG:ath:AT2G06990
TAIR:At2g06990 InParanoid:Q9ZVW2 OMA:TFDRVCD PhylomeDB:Q9ZVW2
ProtClustDB:CLSN2688028 ArrayExpress:Q9ZVW2 Genevestigator:Q9ZVW2
Uniprot:Q9ZVW2
Length = 995
Score = 1152 (410.6 bits), Expect = 6.2e-117, P = 6.2e-117
Identities = 223/260 (85%), Positives = 249/260 (95%)
Query: 1 MKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQ 60
M I+D E+VDLV+QIEE+E KL AHP++KS+D+ QI+ FQRKAEVN+EIQQLKSKMRDSQ
Sbjct: 736 MNIQDTEIVDLVSQIEEVEQKLLAHPMHKSEDDQQIKSFQRKAEVNYEIQQLKSKMRDSQ 795
Query: 61 IQKFRDELKNRSRVLKKLGHINADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHH 120
+QKFRDELKNRSRVLKKLGHI+ADGVVQ+KGRAACLIDTGDELLVTELMFNGTFNDLDHH
Sbjct: 796 LQKFRDELKNRSRVLKKLGHIDADGVVQVKGRAACLIDTGDELLVTELMFNGTFNDLDHH 855
Query: 121 QVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTV 180
QVAALASCFIPVDKS+EQ+NLR EL KPLQQLQ+SARKIAEIQ+ECKLE++V+EYVEST+
Sbjct: 856 QVAALASCFIPVDKSNEQVNLRNELTKPLQQLQDSARKIAEIQHECKLEIDVEEYVESTI 915
Query: 181 RPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKK 240
RPFLMDVIY WSKGA+FAE+IQMTDIFEGSIIRSARRLDEFLNQLRAAA+AVGE +LE K
Sbjct: 916 RPFLMDVIYSWSKGASFAEIIQMTDIFEGSIIRSARRLDEFLNQLRAAAEAVGESSLESK 975
Query: 241 FAAASESLRRGIMFSNSLYL 260
FAAASESLRRGIMF+NSLYL
Sbjct: 976 FAAASESLRRGIMFANSLYL 995
>FB|FBgn0001986 [details] [associations]
symbol:l(2)35Df "lethal (2) 35Df" species:7227 "Drosophila
melanogaster" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG4581 GeneTree:ENSGT00690000102230 KO:K12598
OMA:ENFQKAM InterPro:IPR025696 Pfam:PF13234 EMBL:AF145638
RefSeq:NP_524929.1 UniGene:Dm.1748 SMR:Q9Y134 MINT:MINT-942655
STRING:Q9Y134 EnsemblMetazoa:FBtr0080760 GeneID:48782
KEGG:dme:Dmel_CG4152 UCSC:CG4152-RA FlyBase:FBgn0001986
InParanoid:Q9Y134 OrthoDB:EOG4K3JB5 GenomeRNAi:48782 NextBio:839548
Uniprot:Q9Y134
Length = 1055
Score = 598 (215.6 bits), Expect = 2.3e-57, P = 2.3e-57
Identities = 118/261 (45%), Positives = 176/261 (67%)
Query: 1 MKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKMRDS 59
M I+D E D+VN I + E +L HPL+KS + +I R +Q K + ++Q LK++++ +
Sbjct: 796 MNIKDREFRDIVNTISQFEKRLEEHPLHKSPELERIHRRYQDKVTLQKQLQDLKAELKAA 855
Query: 60 QIQKFRDELKNRSRVLKKLGHINADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDH 119
+ DELK+R RVL+++G+ V++ KGR AC + + DELL+TE++FNG FNDL
Sbjct: 856 RSLLQMDELKHRKRVLRRMGYCKPGDVIEFKGRVACELSSADELLMTEMIFNGVFNDLTA 915
Query: 120 HQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVEST 179
Q AL SCF+ +KSSE + EL+ PL+ +Q+ AR+IA++ ECKL+++ D YV+
Sbjct: 916 PQAVALLSCFVCDEKSSESVKSATELSGPLRSMQDLARRIAKVSTECKLDLDADTYVDK- 974
Query: 180 VRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEK 239
+PFLMDV+ W KG++F V +MTDIFEGSIIR RRL+E L Q+ A++ +G +LE
Sbjct: 975 FKPFLMDVVLAWCKGSSFLAVCKMTDIFEGSIIRCMRRLEELLRQMCQASKTIGNTDLEN 1034
Query: 240 KFAAASESLRRGIMFSNSLYL 260
KF+ L+R I+F+ SLYL
Sbjct: 1035 KFSEGIRLLKRDIVFAASLYL 1055
>RGD|1305984 [details] [associations]
symbol:Skiv2l2 "superkiller viralicidic activity 2-like 2 (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000460
"maturation of 5.8S rRNA" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] [GO:0000178 "exosome (RNase complex)" evidence=ISO]
InterPro:IPR012961 Pfam:PF08148 RGD:1305984 GO:GO:0005524
GO:GO:0016818 eggNOG:COG4581 HOGENOM:HOG000163047
InterPro:IPR025696 Pfam:PF13234 OrthoDB:EOG4D52WW IPI:IPI00372914
EMBL:BC091305 UniGene:Rn.145315 STRING:Q5BJW0 InParanoid:Q5BJW0
Genevestigator:Q5BJW0 Uniprot:Q5BJW0
Length = 337
Score = 589 (212.4 bits), Expect = 2.8e-57, P = 2.8e-57
Identities = 115/261 (44%), Positives = 175/261 (67%)
Query: 1 MKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKMRDS 59
M I+D + ++ ++E EH++++HPL+ + E ++KA++ +I+ K +++ +
Sbjct: 78 MGIQDQGLKKVIQKVEAFEHRMYSHPLHNDPNLETVYTLCEKKAQIAIDIKSAKRELKKA 137
Query: 60 QIQKFRDELKNRSRVLKKLGHINADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDH 119
+ DELK R RVL++LG + V+++KGR AC I + DELL+TE+MFNG FNDL
Sbjct: 138 RTVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMFNGLFNDLSS 197
Query: 120 HQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVEST 179
Q AL SCF+ + SSE L +LA PL+Q+QE A++IA++ E KLE++ + Y+ S+
Sbjct: 198 EQATALLSCFVFQENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYL-SS 256
Query: 180 VRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEK 239
+P LMDV+Y W+ GATFA + +MTD+FEGSIIR RRL+E L Q+ AA+A+G LE
Sbjct: 257 FKPHLMDVVYTWATGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELEN 316
Query: 240 KFAAASESLRRGIMFSNSLYL 260
KFA ++R I+F+ SLYL
Sbjct: 317 KFAEGITKIKRDIVFAASLYL 337
>MGI|MGI:1919448 [details] [associations]
symbol:Skiv2l2 "superkiller viralicidic activity 2-like 2
(S. cerevisiae)" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000460 "maturation of 5.8S
rRNA" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1919448 GO:GO:0005524
GO:GO:0005730 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
GO:GO:0000178 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0000460 GO:GO:0008026 eggNOG:COG4581
GeneTree:ENSGT00690000102230 HOGENOM:HOG000163047 KO:K12598
OMA:ENFQKAM InterPro:IPR025696 Pfam:PF13234 CTD:23517
HOVERGEN:HBG104255 OrthoDB:EOG4D52WW ChiTaRS:SKIV2L2 EMBL:AK012158
EMBL:BC029230 IPI:IPI00113134 RefSeq:NP_082427.1 UniGene:Mm.291029
ProteinModelPortal:Q9CZU3 SMR:Q9CZU3 IntAct:Q9CZU3 STRING:Q9CZU3
PhosphoSite:Q9CZU3 PaxDb:Q9CZU3 PRIDE:Q9CZU3
Ensembl:ENSMUST00000022281 GeneID:72198 KEGG:mmu:72198
UCSC:uc007rws.1 InParanoid:Q9CZU3 NextBio:335677 Bgee:Q9CZU3
Genevestigator:Q9CZU3 GermOnline:ENSMUSG00000016018 Uniprot:Q9CZU3
Length = 1040
Score = 592 (213.5 bits), Expect = 9.7e-57, P = 9.7e-57
Identities = 116/261 (44%), Positives = 175/261 (67%)
Query: 1 MKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKMRDS 59
M I+D + ++ ++E EH++++HPL+ + E +RKA++ +I+ K +++ +
Sbjct: 781 MGIQDQGLKKVIQKVEAFEHRMYSHPLHNDPNLETVYTLCERKAQIALDIKSAKRELKKA 840
Query: 60 QIQKFRDELKNRSRVLKKLGHINADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDH 119
+ DELK R RVL++LG + V+++KGR AC I + DELL+TE+MFNG FNDL
Sbjct: 841 RTVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMFNGLFNDLSS 900
Query: 120 HQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVEST 179
Q AL SCF+ + SSE L +LA PL+Q+QE A++IA++ E KLE++ + Y+ S+
Sbjct: 901 EQATALLSCFVFQENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYL-SS 959
Query: 180 VRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEK 239
+P LMDV+Y W+ GATFA + +MTD+FEGSIIR RRL+E L Q+ AA+A+G LE
Sbjct: 960 FKPHLMDVVYTWATGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELEN 1019
Query: 240 KFAAASESLRRGIMFSNSLYL 260
KFA ++R I+F+ SLYL
Sbjct: 1020 KFAEGITKIKRDIVFAASLYL 1040
>UNIPROTKB|F5H7E2 [details] [associations]
symbol:SKIV2L2 "Superkiller viralicidic activity 2-like 2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696
Pfam:PF13234 HGNC:HGNC:18734 ChiTaRS:SKIV2L2 EMBL:AC010480
EMBL:AC020728 IPI:IPI01011073 ProteinModelPortal:F5H7E2 SMR:F5H7E2
Ensembl:ENST00000545714 UCSC:uc011cqi.2 ArrayExpress:F5H7E2
Bgee:F5H7E2 Uniprot:F5H7E2
Length = 941
Score = 588 (212.0 bits), Expect = 1.6e-56, P = 1.6e-56
Identities = 115/261 (44%), Positives = 175/261 (67%)
Query: 1 MKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKMRDS 59
M I+D + ++ ++E EH++++HPL+ + E ++KA++ +I+ K +++ +
Sbjct: 682 MGIQDQGLKKVIQKVEAFEHRMYSHPLHNDPNLETVYTLCEKKAQIAIDIKSAKRELKKA 741
Query: 60 QIQKFRDELKNRSRVLKKLGHINADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDH 119
+ DELK R RVL++LG + V+++KGR AC I + DELL+TE+MFNG FNDL
Sbjct: 742 RTVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMFNGLFNDLSA 801
Query: 120 HQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVEST 179
Q AL SCF+ + SSE L +LA PL+Q+QE A++IA++ E KLE++ + Y+ S+
Sbjct: 802 EQATALLSCFVFQENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYL-SS 860
Query: 180 VRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEK 239
+P LMDV+Y W+ GATFA + +MTD+FEGSIIR RRL+E L Q+ AA+A+G LE
Sbjct: 861 FKPHLMDVVYTWATGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELEN 920
Query: 240 KFAAASESLRRGIMFSNSLYL 260
KFA ++R I+F+ SLYL
Sbjct: 921 KFAEGITKIKRDIVFAASLYL 941
>UNIPROTKB|P42285 [details] [associations]
symbol:SKIV2L2 "Superkiller viralicidic activity 2-like 2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0000178 "exosome (RNase complex)"
evidence=IDA] [GO:0000460 "maturation of 5.8S rRNA" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000460 GO:GO:0008026 eggNOG:COG4581 HOGENOM:HOG000163047
KO:K12598 OMA:ENFQKAM InterPro:IPR025696 Pfam:PF13234 EMBL:D29641
EMBL:BX640789 EMBL:BC014669 EMBL:BC028604 EMBL:BC031779
EMBL:BC065258 EMBL:BC104996 EMBL:BC113509 IPI:IPI00647217
RefSeq:NP_056175.3 UniGene:Hs.274531 ProteinModelPortal:P42285
SMR:P42285 IntAct:P42285 STRING:P42285 PhosphoSite:P42285
DMDM:71153172 SWISS-2DPAGE:P42285 PaxDb:P42285 PeptideAtlas:P42285
PRIDE:P42285 DNASU:23517 Ensembl:ENST00000230640 GeneID:23517
KEGG:hsa:23517 UCSC:uc003jpy.4 CTD:23517 GeneCards:GC05P054605
HGNC:HGNC:18734 HPA:HPA037379 neXtProt:NX_P42285
PharmGKB:PA134901921 HOVERGEN:HBG104255 InParanoid:P42285
OrthoDB:EOG4D52WW PhylomeDB:P42285 ChiTaRS:SKIV2L2 GenomeRNAi:23517
NextBio:45957 ArrayExpress:P42285 Bgee:P42285 CleanEx:HS_SKIV2L2
Genevestigator:P42285 GermOnline:ENSG00000039123 Uniprot:P42285
Length = 1042
Score = 588 (212.0 bits), Expect = 2.6e-56, P = 2.6e-56
Identities = 115/261 (44%), Positives = 175/261 (67%)
Query: 1 MKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKMRDS 59
M I+D + ++ ++E EH++++HPL+ + E ++KA++ +I+ K +++ +
Sbjct: 783 MGIQDQGLKKVIQKVEAFEHRMYSHPLHNDPNLETVYTLCEKKAQIAIDIKSAKRELKKA 842
Query: 60 QIQKFRDELKNRSRVLKKLGHINADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDH 119
+ DELK R RVL++LG + V+++KGR AC I + DELL+TE+MFNG FNDL
Sbjct: 843 RTVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMFNGLFNDLSA 902
Query: 120 HQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVEST 179
Q AL SCF+ + SSE L +LA PL+Q+QE A++IA++ E KLE++ + Y+ S+
Sbjct: 903 EQATALLSCFVFQENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYL-SS 961
Query: 180 VRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEK 239
+P LMDV+Y W+ GATFA + +MTD+FEGSIIR RRL+E L Q+ AA+A+G LE
Sbjct: 962 FKPHLMDVVYTWATGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELEN 1021
Query: 240 KFAAASESLRRGIMFSNSLYL 260
KFA ++R I+F+ SLYL
Sbjct: 1022 KFAEGITKIKRDIVFAASLYL 1042
>UNIPROTKB|E2RCI5 [details] [associations]
symbol:SKIV2L2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00690000102230 KO:K12598 OMA:ENFQKAM
InterPro:IPR025696 Pfam:PF13234 CTD:23517 EMBL:AAEX03001437
RefSeq:XP_849676.1 Ensembl:ENSCAFT00000010985 GeneID:607950
KEGG:cfa:607950 Uniprot:E2RCI5
Length = 1042
Score = 587 (211.7 bits), Expect = 3.4e-56, P = 3.4e-56
Identities = 115/261 (44%), Positives = 174/261 (66%)
Query: 1 MKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKMRDS 59
M I+D + ++ ++E EH++++HPL+ + E ++KA++ +I+ K +++ +
Sbjct: 783 MGIQDQGLKKVIQKVEAFEHRMYSHPLHNDPNLETVYTLCEKKAQIAIDIKSAKRELKKA 842
Query: 60 QIQKFRDELKNRSRVLKKLGHINADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDH 119
+ DELK R RVL++LG + V+++KGR AC I + DELL+TE+MFNG FNDL
Sbjct: 843 RTVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMFNGLFNDLSA 902
Query: 120 HQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVEST 179
Q AL SCF+ + SSE L +LA PL+Q+QE A++IA++ E KLE++ + Y+ S
Sbjct: 903 EQATALLSCFVFQENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYLNS- 961
Query: 180 VRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEK 239
+P LMDV+Y W+ GATFA + +MTD+FEGSIIR RRL+E L Q+ AA+A+G LE
Sbjct: 962 FKPHLMDVVYTWATGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELEN 1021
Query: 240 KFAAASESLRRGIMFSNSLYL 260
KFA ++R I+F+ SLYL
Sbjct: 1022 KFAEGITKIKRDIVFAASLYL 1042
>ZFIN|ZDB-GENE-040426-2854 [details] [associations]
symbol:skiv2l2 "superkiller viralicidic activity
2-like 2" species:7955 "Danio rerio" [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0031101 "fin regeneration"
evidence=IMP] [GO:0051781 "positive regulation of cell division"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-040426-2854 GO:GO:0005524 GO:GO:0051781 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031101
GO:GO:0008026 eggNOG:COG4581 HOGENOM:HOG000163047 KO:K12598
InterPro:IPR025696 Pfam:PF13234 CTD:23517 HOVERGEN:HBG104255
OrthoDB:EOG4D52WW EMBL:BC061456 IPI:IPI00481753 RefSeq:NP_999933.1
UniGene:Dr.75715 ProteinModelPortal:Q6P7X6 STRING:Q6P7X6
PRIDE:Q6P7X6 GeneID:406795 KEGG:dre:406795 NextBio:20818305
Bgee:Q6P7X6 Uniprot:Q6P7X6
Length = 1034
Score = 579 (208.9 bits), Expect = 2.4e-55, P = 2.4e-55
Identities = 112/261 (42%), Positives = 173/261 (66%)
Query: 1 MKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKMRDS 59
M I+DP + ++ ++E EH+++ HPL+ + E + ++KA + +I+ K +++ +
Sbjct: 775 MGIKDPALKKVIQKVEAFEHRMYTHPLHSDPNLEAVYKLCEKKALIAGDIKAAKRELKKA 834
Query: 60 QIQKFRDELKNRSRVLKKLGHINADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDH 119
+ DELK R RVL++LG + V+++KGR AC +GDELL+TE+MFNG FNDL
Sbjct: 835 RTVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVACETSSGDELLLTEMMFNGLFNDLTA 894
Query: 120 HQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVEST 179
Q AL SCF+ + ++E L +L PL+Q+QE A++IA++ E KLEV+ D Y+
Sbjct: 895 EQATALLSCFVFQENANEMPKLTEQLGGPLRQMQECAKRIAKVSAEAKLEVDEDSYLNQ- 953
Query: 180 VRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEK 239
RP LMDV+Y W+ G++F+++ +MTD+FEGSIIR RRL+E L Q+ AA+A+G LE
Sbjct: 954 FRPHLMDVVYTWANGSSFSQICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELEN 1013
Query: 240 KFAAASESLRRGIMFSNSLYL 260
KFA ++R I+F+ SLYL
Sbjct: 1014 KFATGITKIKRDIVFAASLYL 1034
>UNIPROTKB|F1SLL6 [details] [associations]
symbol:SKIV2L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0000460 "maturation of 5.8S rRNA" evidence=IEA] [GO:0000178
"exosome (RNase complex)" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0000178 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000460 GO:GO:0008026
GeneTree:ENSGT00690000102230 OMA:ENFQKAM InterPro:IPR025696
Pfam:PF13234 EMBL:FP236391 EMBL:CU929534 Ensembl:ENSSSCT00000018417
Uniprot:F1SLL6
Length = 1046
Score = 575 (207.5 bits), Expect = 6.9e-55, P = 6.9e-55
Identities = 115/264 (43%), Positives = 175/264 (66%)
Query: 1 MKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKMRDS 59
M I+D + ++ ++E EH++++HPL+ + E ++KA++ +I+ K +++ +
Sbjct: 784 MGIQDQGLKKVIQKVEAFEHRMYSHPLHNDPNLETVYTLCEKKAQIAIDIKSAKRELKKA 843
Query: 60 QIQKFRDELKNRSRVLKKLGHINADGVVQLKGRAACLID---TGDELLVTELMFNGTFND 116
+ DELK R RVL++LG + V+++KGR AC I + DELL+TE+MFNG FND
Sbjct: 844 RTVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVACEISRWYSADELLLTEMMFNGLFND 903
Query: 117 LDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYV 176
L Q AL SCF+ + SSE L +LA PL+Q+QE A++IA++ E KLE++ + Y+
Sbjct: 904 LSAEQATALLSCFVFQENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYL 963
Query: 177 ESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVN 236
S+ +P LMDV+Y W+ GATFA + +MTD+FEGSIIR RRL+E L Q+ AA+A+G
Sbjct: 964 -SSFKPHLMDVVYTWATGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTE 1022
Query: 237 LEKKFAAASESLRRGIMFSNSLYL 260
LE KFA ++R I+F+ SLYL
Sbjct: 1023 LENKFAEGITKIKRDIVFAASLYL 1046
>UNIPROTKB|F1N993 [details] [associations]
symbol:F1N993 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000178 "exosome (RNase
complex)" evidence=IEA] [GO:0000460 "maturation of 5.8S rRNA"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 GO:GO:0000178 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0000460
GO:GO:0008026 GeneTree:ENSGT00690000102230 OMA:ENFQKAM
InterPro:IPR025696 Pfam:PF13234 EMBL:AADN02054537 EMBL:AADN02054530
EMBL:AADN02054531 EMBL:AADN02054532 EMBL:AADN02054533
EMBL:AADN02054534 EMBL:AADN02054535 EMBL:AADN02054536
IPI:IPI00599020 Ensembl:ENSGALT00000023719 Uniprot:F1N993
Length = 1031
Score = 561 (202.5 bits), Expect = 2.1e-53, P = 2.1e-53
Identities = 111/261 (42%), Positives = 169/261 (64%)
Query: 1 MKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKMRDS 59
M I+D + ++ ++E EH++++HPL+ + E + +RKA++ +I+ K +++ +
Sbjct: 772 MGIKDQGLKKVIQKVEAFEHRMYSHPLHNDPNLETIYKLCERKAQIAMDIKAAKRELKKA 831
Query: 60 QIQKFRDELKNRSRVLKKLGHINADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDH 119
+ DELK R RVL++LG + V+++KGR AC I + DELL+TE+MFNG FNDL
Sbjct: 832 RTVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMFNGLFNDLSA 891
Query: 120 HQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVEST 179
Q AL SCF+ + S+E L +LA PL+Q+QE A++IA + E KLE++ + Y+ S
Sbjct: 892 EQATALLSCFVFQENSNEMPKLTEQLAGPLRQMQECAKRIARVSAEAKLEIDEENYLNS- 950
Query: 180 VRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEK 239
RP LMDV+Y W+ GA+FA + +MTD+FEGSIIR RRL+E L Q+ AA+A+G LE
Sbjct: 951 FRPNLMDVVYTWANGASFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELEN 1010
Query: 240 KFAAASESLRRGIMFSNSLYL 260
KFA R + F + L +
Sbjct: 1011 KFAEGRTYKSRPVSFHSGLQI 1031
>POMBASE|SPAC6F12.16c [details] [associations]
symbol:mtr4 "ATP-dependent RNA helicase, TRAMP complex
subunit Mtr4" species:4896 "Schizosaccharomyces pombe" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005730 "nucleolus" evidence=ISO] [GO:0006364 "rRNA processing"
evidence=ISO] [GO:0016078 "tRNA catabolic process" evidence=ISO]
[GO:0031499 "TRAMP complex" evidence=IDA] [GO:0043630 "ncRNA
polyadenylation involved in polyadenylation-dependent ncRNA
catabolic process" evidence=ISO] [GO:0071049 "nuclear retention of
pre-mRNA with aberrant 3'-ends at the site of transcription"
evidence=ISO] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
PomBase:SPAC6F12.16c GO:GO:0005524 EMBL:CU329670 GO:GO:0005730
GO:GO:0003676 GO:GO:0031499 GO:GO:0043630 GO:GO:0016078
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 HOGENOM:HOG000163047 KO:K12598 InterPro:IPR025696
Pfam:PF13234 EMBL:AB027847 PIR:T11667 RefSeq:NP_593302.1
ProteinModelPortal:O14232 STRING:O14232 EnsemblFungi:SPAC6F12.16c.1
GeneID:2541639 KEGG:spo:SPAC6F12.16c OMA:DDRISAD OrthoDB:EOG4S1XG7
NextBio:20802732 GO:GO:0071049 Uniprot:O14232
Length = 1117
Score = 549 (198.3 bits), Expect = 5.5e-52, P = 5.5e-52
Identities = 114/262 (43%), Positives = 173/262 (66%)
Query: 1 MKIEDPEVVDLVNQIEELEHKLFAHPL-NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDS 59
M I++P + L+ ++ LE +L ++PL N S+ E + + RK + E++ LK K+ +
Sbjct: 857 MNIKEPTFIKLMKKVNILESRLLSNPLHNFSELEEKYAEYLRKLALLEEVKDLKKKLSKA 916
Query: 60 QIQKFRDELKNRSRVLKKLGHINADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDH 119
+ DEL +R RVL++LG +D V+++KGR AC I +GD LL+TEL+FNG FNDL
Sbjct: 917 RSIMQLDELNSRKRVLRRLGFTTSDDVIEVKGRVACEISSGDGLLLTELIFNGMFNDLTP 976
Query: 120 HQVAALASCFIPVDKSS-EQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVES 178
Q AAL SC + +KS E ++ ELA PL+ LQE AR+IA++ E K E+N +EYV S
Sbjct: 977 EQCAALLSCLVFQEKSEVENQRMKEELAGPLKILQEMARRIAKVSKESKQELNEEEYVNS 1036
Query: 179 TVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLE 238
+P LM+V+Y W+ GA+FA++ +MTD++EGS+IR RRL+E + Q+ AA+ +G +L+
Sbjct: 1037 -FKPSLMEVVYAWAHGASFAQICKMTDVYEGSLIRMFRRLEELIRQMVDAAKVIGNTSLQ 1095
Query: 239 KKFAAASESLRRGIMFSNSLYL 260
+K + R I+FS SLYL
Sbjct: 1096 QKMEDTIACIHRDIVFSASLYL 1117
>UNIPROTKB|D4AE49 [details] [associations]
symbol:D4AE49 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR012961 Pfam:PF00271 Pfam:PF08148 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
GeneTree:ENSGT00690000102230 InterPro:IPR025696 Pfam:PF13234
IPI:IPI00776783 PRIDE:D4AE49 Ensembl:ENSRNOT00000060695
ArrayExpress:D4AE49 Uniprot:D4AE49
Length = 764
Score = 525 (189.9 bits), Expect = 2.7e-50, P = 2.7e-50
Identities = 108/261 (41%), Positives = 164/261 (62%)
Query: 1 MKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKMRDS 59
M I+D + ++ ++E EH++++HPL+ + E ++KA++ +I+ K +++ +
Sbjct: 505 MGIQDQGLKKVIQKVEAFEHRMYSHPLHNDPNLETVYTLCEKKAQIAIDIKSAKRELKKA 564
Query: 60 QIQKFRDELKNRSRVLKKLGHINADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDH 119
+ DELK R L + G ++ KG C DELL+TE+MFNG FNDL
Sbjct: 565 RTVLQMDELKCRKPCLFRPGKAFLLDLIHRKGYHFCYKSCADELLLTEMMFNGLFNDLSS 624
Query: 120 HQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVEST 179
Q AL SCF+ + SSE L +LA PL+Q+QE A++IA++ E KLE++ + Y+ S+
Sbjct: 625 EQATALLSCFVFQENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYL-SS 683
Query: 180 VRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEK 239
+P LMDV+Y W+ GATFA + +MTD+FEGSIIR RRL+E L Q+ AA+A+G LE
Sbjct: 684 FKPHLMDVVYTWATGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELEN 743
Query: 240 KFAAASESLRRGIMFSNSLYL 260
KFA ++R I+F+ SLYL
Sbjct: 744 KFAEGITKIKRDIVFAASLYL 764
>SGD|S000003586 [details] [associations]
symbol:MTR4 "ATP-dependent 3'-5' RNA helicase of the DExD/H
family" species:4932 "Saccharomyces cerevisiae" [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0034475 "U4 snRNA 3'-end processing"
evidence=IMP] [GO:0000467 "exonucleolytic trimming to generate
mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016075 "rRNA catabolic process" evidence=IMP] [GO:0043629
"ncRNA polyadenylation" evidence=IDA] [GO:0071038 "nuclear
polyadenylation-dependent tRNA catabolic process" evidence=IGI;IDA]
[GO:0071035 "nuclear polyadenylation-dependent rRNA catabolic
process" evidence=IMP] [GO:0071031 "nuclear mRNA surveillance of
mRNA 3'-end processing" evidence=IGI;IMP] [GO:0071042 "nuclear
polyadenylation-dependent mRNA catabolic process" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0031499 "TRAMP complex" evidence=IDA;IPI] [GO:0008143 "poly(A)
RNA binding" evidence=IDA] [GO:0034459 "ATP-dependent 3'-5' RNA
helicase activity" evidence=IMP;IDA] [GO:0034476 "U5 snRNA 3'-end
processing" evidence=IMP] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0071049
"nuclear retention of pre-mRNA with aberrant 3'-ends at the site of
transcription" evidence=IGI] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0071051
"polyadenylation-dependent snoRNA 3'-end processing" evidence=IMP]
InterPro:IPR001650 InterPro:IPR011254 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
SGD:S000003586 GO:GO:0005524 GO:GO:0005730 EMBL:BK006943
GO:GO:0016491 GO:GO:0031499 GO:GO:0043629 GO:GO:0071035
GO:GO:0071038 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF56821 GO:GO:0000467 GO:GO:0071042 GO:GO:0071051
GO:GO:0008143 GO:GO:0034459 eggNOG:COG4581 GO:GO:0034475
GO:GO:0034476 GeneTree:ENSGT00690000102230 HOGENOM:HOG000163047
KO:K12598 OMA:ENFQKAM InterPro:IPR025696 Pfam:PF13234
OrthoDB:EOG4S1XG7 GO:GO:0071049 EMBL:Z49325 PIR:S56822
RefSeq:NP_012485.1 PDB:2XGJ PDB:3L9O PDBsum:2XGJ PDBsum:3L9O
ProteinModelPortal:P47047 SMR:P47047 DIP:DIP-6394N IntAct:P47047
MINT:MINT-620894 STRING:P47047 PaxDb:P47047 PeptideAtlas:P47047
EnsemblFungi:YJL050W GeneID:853397 KEGG:sce:YJL050W CYGD:YJL050w
EvolutionaryTrace:P47047 NextBio:973882 Genevestigator:P47047
GermOnline:YJL050W Uniprot:P47047
Length = 1073
Score = 531 (192.0 bits), Expect = 4.2e-50, P = 4.2e-50
Identities = 111/261 (42%), Positives = 171/261 (65%)
Query: 1 MKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKMRDS 59
MKIED + + L+ +I+ L KL ++PL S E + RK +++ +++QLK K+ +S
Sbjct: 814 MKIEDEDFLKLMKKIDVLNTKLSSNPLTNSMRLEELYGKYSRKHDLHEDMKQLKRKISES 873
Query: 60 QIQKFRDELKNRSRVLKKLGHINADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDH 119
Q D+L+ R RVL++LG + +++LKGR AC I +GDELL+TEL+FNG FN+L
Sbjct: 874 QAVIQLDDLRRRKRVLRRLGFCTPNDIIELKGRVACEISSGDELLLTELIFNGNFNELKP 933
Query: 120 HQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVEST 179
Q AAL SCF ++ E L+ ELA+PL+ ++E A KIA+I + K+EV +YVES
Sbjct: 934 EQAAALLSCFAFQERCKEAPRLKPELAEPLKAMREIAAKIAKIMKDSKIEVVEKDYVES- 992
Query: 180 VRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEK 239
R LM+V+Y W +GATF ++ +MTD++EGS+IR +RL+E + +L A +G +L++
Sbjct: 993 FRHELMEVVYEWCRGATFTQICKMTDVYEGSLIRMFKRLEELVKELVDVANTIGNSSLKE 1052
Query: 240 KFAAASESLRRGIMFSNSLYL 260
K A + + R I+ + SLYL
Sbjct: 1053 KMEAVLKLIHRDIVSAGSLYL 1073
>TAIR|locus:2026001 [details] [associations]
symbol:MTR4 "homolog of yeast MTR4" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IMP]
[GO:0031125 "rRNA 3'-end processing" evidence=IMP] [GO:0000398
"mRNA splicing, via spliceosome" evidence=RCA] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] [GO:0009560 "embryo sac
egg cell differentiation" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009909 "regulation of
flower development" evidence=RCA] [GO:0010074 "maintenance of
meristem identity" evidence=RCA] [GO:0010212 "response to ionizing
radiation" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0030422 "production of
siRNA involved in RNA interference" evidence=RCA] [GO:0035196
"production of miRNAs involved in gene silencing by miRNA"
evidence=RCA] [GO:0043687 "post-translational protein modification"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0048825 "cotyledon development"
evidence=RCA] [GO:0051301 "cell division" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005634 GO:GO:0003676
EMBL:AC007258 UniGene:At.74832 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0031125 eggNOG:COG4581
HOGENOM:HOG000163047 KO:K12598 OMA:ENFQKAM InterPro:IPR025696
Pfam:PF13234 EMBL:AK176836 IPI:IPI00536033 PIR:E96621
RefSeq:NP_176185.1 UniGene:At.43462 ProteinModelPortal:Q9XIF2
SMR:Q9XIF2 PaxDb:Q9XIF2 PRIDE:Q9XIF2 EnsemblPlants:AT1G59760.1
GeneID:842269 KEGG:ath:AT1G59760 TAIR:At1g59760 InParanoid:Q9XIF2
PhylomeDB:Q9XIF2 ProtClustDB:CLSN2679700 ArrayExpress:Q9XIF2
Genevestigator:Q9XIF2 Uniprot:Q9XIF2
Length = 988
Score = 525 (189.9 bits), Expect = 1.4e-49, P = 1.4e-49
Identities = 107/261 (40%), Positives = 169/261 (64%)
Query: 1 MKIEDPEVVDLVNQIEELEHKLFAHPLNKSQ-DENQIRCFQRKAEVNHEIQQLKSKMRDS 59
MKI+ V ++E LE+ H + KS +++ Q K E+ +I+ LK +R S
Sbjct: 729 MKIKSSSYKKTVRRLEALENLFEKHKIAKSPLITEKLKVLQMKEELIAKIKSLKKTVRSS 788
Query: 60 QIQKFRDELKNRSRVLKKLGHINADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDH 119
F+DELK R RVL++LG+I +D VV+LKG+ AC I + +EL +TELMF+G F D
Sbjct: 789 TALAFKDELKARKRVLRRLGYITSDNVVELKGKVACEISSAEELTLTELMFSGIFKDAKV 848
Query: 120 HQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVEST 179
++ +L SCF+ ++ + R EL QLQ++AR++AE+Q +CK+E++V+ +V+S
Sbjct: 849 EELVSLLSCFVWRERLPDAAKPREELDLLFIQLQDTARRVAEVQLDCKVEIDVESFVQS- 907
Query: 180 VRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEK 239
RP +M+ +Y W+KG+ F EV+++ +FEGS+IR+ RR++E L QL AA+++GE LE
Sbjct: 908 FRPDIMEAVYAWAKGSKFYEVMEIARVFEGSLIRAIRRMEEVLQQLIVAAKSIGETQLEA 967
Query: 240 KFAAASESLRRGIMFSNSLYL 260
K A ++R I+F+ SLYL
Sbjct: 968 KLEEAVSKIKRDIVFAASLYL 988
>WB|WBGene00012342 [details] [associations]
symbol:mtr-4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0040011 InterPro:IPR018247
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0040020 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0040022 GO:GO:0008026 eggNOG:COG4581 EMBL:Z70271 PIR:T26282
RefSeq:NP_501757.1 ProteinModelPortal:Q23223 SMR:Q23223
MINT:MINT-6670291 STRING:Q23223 PaxDb:Q23223 EnsemblMetazoa:W08D2.7
GeneID:177824 KEGG:cel:CELE_W08D2.7 CTD:177824 WormBase:W08D2.7
GeneTree:ENSGT00690000102230 HOGENOM:HOG000163047 InParanoid:Q23223
KO:K12598 OMA:ENFQKAM NextBio:898538 InterPro:IPR025696
Pfam:PF13234 Uniprot:Q23223
Length = 1026
Score = 525 (189.9 bits), Expect = 1.6e-49, P = 1.6e-49
Identities = 110/261 (42%), Positives = 167/261 (63%)
Query: 1 MKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRC-FQRKAEVNHEIQQLKSKMRDS 59
M+I+ E+ +L+ + + LE +L H + K + ++ F++K + E+ LK++ +
Sbjct: 768 MEIKTVEMKELIAREKSLEGRLETHSMTKRDNMKDLKKQFEQKQDAVKELNALKAERKSV 827
Query: 60 QIQKFRDELKNRSRVLKKLGHINADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDH 119
Q +EL NR RVL++LG++ D + LKG AC + DEL++TE++ G FN LD
Sbjct: 828 QSTLHLEELNNRKRVLRRLGYLGNDDALVLKGSVACELSASDELILTEMLLKGIFNTLDV 887
Query: 120 HQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVEST 179
Q AAL SCF+ DK + L EL L +L E AR +A++ NECK+EV D+YV S+
Sbjct: 888 AQTAALLSCFVFQDKCAAP-KLATELQTCLSELHEQARNVAKVSNECKMEVMEDKYV-SS 945
Query: 180 VRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEK 239
P LMDV+Y W GATF+E+++ TD+FEGSIIR+ RRL+E L ++ AA+A+ LE+
Sbjct: 946 FNPGLMDVVYQWVNGATFSEIVKTTDVFEGSIIRTLRRLEEVLREMINAAKALANKELEQ 1005
Query: 240 KFAAASESLRRGIMFSNSLYL 260
KF A ++L+R I+F+ SLYL
Sbjct: 1006 KFEDARKNLKRDIVFAASLYL 1026
>UNIPROTKB|F1MAH7 [details] [associations]
symbol:F1MAH7 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0000178 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0000460 GO:GO:0008026 InterPro:IPR025696
Pfam:PF13234 IPI:IPI00372914 PRIDE:F1MAH7
Ensembl:ENSRNOT00000013683 ArrayExpress:F1MAH7 Uniprot:F1MAH7
Length = 1046
Score = 525 (189.9 bits), Expect = 1.7e-49, P = 1.7e-49
Identities = 111/263 (42%), Positives = 169/263 (64%)
Query: 1 MKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKMRDS 59
M I+D + ++ ++E EH++++HPL+ + E ++KA++ +I+ K +++ +
Sbjct: 786 MGIQDQGLKKVIQKVEAFEHRMYSHPLHNDPNLETVYTLCEKKAQIAIDIKSAKRELKKA 845
Query: 60 QIQKFRDELKNRSRVLKKL-GHINADGVVQLKGRAACLI-DTGDELLVTELMFNGTFNDL 117
+ DELK R +KL I +D QLK R + + + DELL+TE+MFNG FNDL
Sbjct: 846 RTVLQMDELKCRKPCTRKLIFKITSDEK-QLKHRVSLTVHSSADELLLTEMMFNGLFNDL 904
Query: 118 DHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVE 177
Q AL SCF+ + SSE L +LA PL+Q+QE A++IA++ E KLE++ + Y+
Sbjct: 905 SSEQATALLSCFVFQENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYL- 963
Query: 178 STVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNL 237
S+ +P LMDV+Y W+ GATFA + +MTD+FEGSIIR RRL+E L Q+ AA+A+G L
Sbjct: 964 SSFKPHLMDVVYTWATGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTEL 1023
Query: 238 EKKFAAASESLRRGIMFSNSLYL 260
E KFA ++R I+F+ SLYL
Sbjct: 1024 ENKFAEGITKIKRDIVFAASLYL 1046
>ASPGD|ASPL0000070749 [details] [associations]
symbol:mtr4 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0031499 "TRAMP
complex" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:BN001303
GO:GO:0031499 GO:GO:0043629 GO:GO:0071035 GO:GO:0071038
EMBL:AACD01000076 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000467 GO:GO:0071042 GO:GO:0071051 GO:GO:0008143
GO:GO:0034459 eggNOG:COG4581 GO:GO:0034475 GO:GO:0034476
HOGENOM:HOG000163047 KO:K12598 OMA:ENFQKAM InterPro:IPR025696
Pfam:PF13234 OrthoDB:EOG4S1XG7 GO:GO:0071049 RefSeq:XP_662016.1
ProteinModelPortal:Q5B4W8 STRING:Q5B4W8
EnsemblFungi:CADANIAT00006045 GeneID:2872204 KEGG:ani:AN4412.2
Uniprot:Q5B4W8
Length = 1073
Score = 502 (181.8 bits), Expect = 5.5e-47, P = 5.5e-47
Identities = 114/262 (43%), Positives = 164/262 (62%)
Query: 1 MKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKMRDS 59
M I+D E + +IE LE +L +PL+ S E + K ++ ++I+ K K+ +
Sbjct: 813 MGIKDDEFKKTLRKIEVLESRLVTNPLHNSPRLEELYEQYAEKLDLGNKIKATKKKISEG 872
Query: 60 QIQKFRDELKNRSRVLKKLGHINADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDH 119
+ DELK R RVL++ G IN VVQLK R AC I TGDEL+++EL+FNG FN L
Sbjct: 873 MAIQQLDELKCRKRVLRRFGFINEAEVVQLKARVACEISTGDELMLSELLFNGFFNKLTP 932
Query: 120 HQVAALASCFIPVDKSSEQINL-RMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVES 178
Q AA+ S F+ +K+ E L + ELAKPL+++Q AR IA++ E KL V+ ++YV+S
Sbjct: 933 EQAAAVLSVFVFEEKTKETPPLSKEELAKPLKEIQAQARIIAKVAQESKLAVSEEDYVQS 992
Query: 179 TVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLE 238
LM+VIY W+ G +FA++ MTD++EGS+IR RRL+E L Q+ AA+ +G LE
Sbjct: 993 -FHWELMEVIYEWANGKSFADICGMTDVYEGSLIRVFRRLEECLRQMAQAAKVMGSEELE 1051
Query: 239 KKFAAASESLRRGIMFSNSLYL 260
KF A +RR I+ + SLYL
Sbjct: 1052 SKFETALTKVRRDIVAAQSLYL 1073
>DICTYBASE|DDB_G0275633 [details] [associations]
symbol:DDB_G0275633 "superkiller viralicidic activity
2-like protein" species:44689 "Dictyostelium discoideum"
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0275633 GO:GO:0005524
GO:GO:0003676 EMBL:AAFI02000013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG4581 KO:K12598 OMA:ENFQKAM
InterPro:IPR025696 Pfam:PF13234 RefSeq:XP_643574.1
ProteinModelPortal:Q86IE2 STRING:Q86IE2 EnsemblProtists:DDB0233453
GeneID:8620161 KEGG:ddi:DDB_G0275633 InParanoid:Q86IE2
ProtClustDB:CLSZ2444279 Uniprot:Q86IE2
Length = 1128
Score = 500 (181.1 bits), Expect = 1.0e-46, P = 1.0e-46
Identities = 104/268 (38%), Positives = 167/268 (62%)
Query: 1 MKIEDPEVVDLVNQIEELEHKLFAHP-LNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDS 59
MKI+DP L+ +IE LE + + N + E + ++K E+ EI+QL+ +++
Sbjct: 863 MKIKDPNFKKLIKKIETLESRFSSTACFNDTDIEERCNLLEKKNEITKEIKQLQKQIKSG 922
Query: 60 QIQKFRDELKNRSRVLKKLGHINADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDH 119
+D+L++ R+L +LG+I DGVV LKGR AC I GDEL+++EL+F G FNDL
Sbjct: 923 DEVILKDDLRSMKRILTRLGYITDDGVVALKGRVACEISAGDELVISELLFAGLFNDLSV 982
Query: 120 HQVAALASCFIPVDKSS--EQIN---LRMELAKPLQQLQESARKIAEIQNECKLEVNVDE 174
Q A+ SCF+ ++ S +N ++ +L + ++++A K+ + ECKL +VDE
Sbjct: 983 EQCVAVFSCFVFQNEGSANNDVNNPKIKPDLVPLYRVIRDTASKVVTVSQECKL-TSVDE 1041
Query: 175 --YVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAV 232
Y+ S P MDV + W+ GA+FA++++MTD FEG++IR RRLDE + Q+ A++++
Sbjct: 1042 KTYLAS-FNPNFMDVTFAWASGASFADIVKMTDTFEGNLIRGIRRLDELIRQMVIASKSI 1100
Query: 233 GEVNLEKKFAAASESLRRGIMFSNSLYL 260
G LE KF+ A+ ++R I F+ SLYL
Sbjct: 1101 GNTELEAKFSEATVKIKRDIPFAGSLYL 1128
>CGD|CAL0003794 [details] [associations]
symbol:orf19.1335 species:5476 "Candida albicans" [GO:0008143
"poly(A) RNA binding" evidence=IEA] [GO:0034459 "ATP-dependent
3'-5' RNA helicase activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0031499 "TRAMP complex" evidence=IEA] [GO:0034476
"U5 snRNA 3'-end processing" evidence=IEA] [GO:0071049 "nuclear
retention of pre-mRNA with aberrant 3'-ends at the site of
transcription" evidence=IEA] [GO:0000467 "exonucleolytic trimming
to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0071035 "nuclear polyadenylation-dependent rRNA catabolic
process" evidence=IEA] [GO:0043629 "ncRNA polyadenylation"
evidence=IEA] [GO:0071051 "polyadenylation-dependent snoRNA 3'-end
processing" evidence=IEA] [GO:0071042 "nuclear
polyadenylation-dependent mRNA catabolic process" evidence=IEA]
[GO:0071038 "nuclear polyadenylation-dependent tRNA catabolic
process" evidence=IEA] [GO:0034475 "U4 snRNA 3'-end processing"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
CGD:CAL0003794 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG4581
EMBL:AACQ01000188 EMBL:AACQ01000187 KO:K12598 InterPro:IPR025696
Pfam:PF13234 RefSeq:XP_711657.1 RefSeq:XP_711675.1
RefSeq:XP_888948.1 STRING:Q59PN6 GeneID:3646717 GeneID:3646739
GeneID:3703907 KEGG:cal:CaO19.1335 KEGG:cal:CaO19.8915
KEGG:cal:CaO19_1335 Uniprot:Q59PN6
Length = 1106
Score = 454 (164.9 bits), Expect = 8.4e-42, P = 8.4e-42
Identities = 98/261 (37%), Positives = 162/261 (62%)
Query: 1 MKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRC-FQRKAEVNHEIQQLKSKMRDS 59
MKI D + L+ +I+ L+ K+ ++PLN S + + + K ++N++I++L+ ++ +
Sbjct: 847 MKITDDDFKKLLQKIDILDSKIVSNPLNNSARLDDLYAKYTAKVDLNNQIKKLEEQIFQA 906
Query: 60 QIQKFRDELKNRSRVLKKLGHINADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDH 119
+ D+L N RVLKKL ++ VV+LKGR A + TGDEL++TEL+F+G FN+L
Sbjct: 907 KSIIQLDQLSNMKRVLKKLEFTGSEEVVELKGRVAAELSTGDELMITELLFSGFFNELTP 966
Query: 120 HQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVEST 179
Q+ L S FI +++ E L+ ELA+P + + E+A KIA+I + LE+ +Y+E
Sbjct: 967 QQICGLLSAFIFQERAKELPKLKPELAEPAKVIHETANKIAKISKQSGLEIVEKDYIEQ- 1025
Query: 180 VRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEK 239
L++V++ WS GA+F+ + +MTDI+EGSIIR+ RR E + QL A++ +G L
Sbjct: 1026 FNLALVEVVFVWSNGASFSSICKMTDIYEGSIIRALRREIELIKQLVDASKIIGNQELVD 1085
Query: 240 KFAAASESLRRGIMFSNSLYL 260
KF E + R + +SLY+
Sbjct: 1086 KFEKCIELINRDFVQVSSLYM 1106
>UNIPROTKB|G4NH56 [details] [associations]
symbol:MGG_03931 "FRQ-interacting RNA helicase"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0031499 GO:GO:0043629
GO:GO:0071035 GO:GO:0071038 EMBL:CM001236 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000467 GO:GO:0071042
GO:GO:0071051 GO:GO:0008143 GO:GO:0034459 GO:GO:0034475
GO:GO:0034476 KO:K12598 InterPro:IPR025696 Pfam:PF13234
GO:GO:0071049 RefSeq:XP_003719933.1 EnsemblFungi:MGG_03931T0
GeneID:2677161 KEGG:mgr:MGG_03931 Uniprot:G4NH56
Length = 1102
Score = 436 (158.5 bits), Expect = 7.1e-40, P = 7.1e-40
Identities = 99/263 (37%), Positives = 160/263 (60%)
Query: 1 MKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKMRDS 59
M I+D L+ +IE LE +L ++PL+ S + ++ ++ K E+ +I++ K + S
Sbjct: 842 MGIKDDSFKKLMRKIEVLESRLLSNPLHGSPNLPELWDKYKIKTELTSQIKETKRAINKS 901
Query: 60 QIQKFRDELKNRSRVLKKLGHINADGVVQLKGRAACLIDT--GDELLVTELMFNGTFNDL 117
DELK+R RVL++L IN + VVQ+K R AC I + G EL+++EL+FNG FN+L
Sbjct: 902 YSIAQLDELKSRMRVLRRLNFINENEVVQMKARVACEISSTEGHELVISELLFNGFFNEL 961
Query: 118 DHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVE 177
+ AA+ SCF+ D+ E L+ +L K ++++ A+ IA I E KL+V+ DE V
Sbjct: 962 EPEVCAAILSCFV-FDEKMEGTPLKEDLDKLVREIHAQAKTIARISRESKLDVS-DEQVV 1019
Query: 178 STVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNL 237
++ L + + W+KG FAE+ +MT+ +EGS++R RRL+E L Q+ A + +G L
Sbjct: 1020 GNLKWQLTETVLAWAKGRPFAEICKMTNAYEGSLVRIMRRLEELLRQMAEAGKVMGSEML 1079
Query: 238 EKKFAAASESLRRGIMFSNSLYL 260
+KKF A + R ++ + SLYL
Sbjct: 1080 QKKFEKALSLISRDVVSAASLYL 1102
>POMBASE|SPAC17H9.02 [details] [associations]
symbol:SPAC17H9.02 "TRAMP complex ATP-dependent RNA
helicase (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0006364
"rRNA processing" evidence=ISO] [GO:0016078 "tRNA catabolic
process" evidence=ISO] [GO:0031499 "TRAMP complex" evidence=ISO]
[GO:0043630 "ncRNA polyadenylation involved in
polyadenylation-dependent ncRNA catabolic process" evidence=ISO]
[GO:0071049 "nuclear retention of pre-mRNA with aberrant 3'-ends at
the site of transcription" evidence=ISO] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC17H9.02 GO:GO:0005524
EMBL:CU329670 GO:GO:0005730 GO:GO:0003676 GO:GO:0031499
GO:GO:0043630 GO:GO:0016078 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 eggNOG:COG4581
HOGENOM:HOG000163047 KO:K12598 InterPro:IPR025696 Pfam:PF13234
OrthoDB:EOG4S1XG7 GO:GO:0071049 PIR:T37868 RefSeq:NP_593572.1
ProteinModelPortal:O13799 STRING:O13799 EnsemblFungi:SPAC17H9.02.1
GeneID:2542173 KEGG:spo:SPAC17H9.02 OMA:FARWISE NextBio:20803244
Uniprot:O13799
Length = 1030
Score = 435 (158.2 bits), Expect = 7.8e-40, P = 7.8e-40
Identities = 99/263 (37%), Positives = 156/263 (59%)
Query: 1 MKIEDPEVVDLVNQIEELEHKLFAHPLNK-SQDENQIRCFQRKAEVNHEIQQLKSKMRDS 59
M IE + + ++E LE KLF P K S+ + F++K + +I+ + +K+ ++
Sbjct: 770 MHIESSTLSLSLRKLEILEPKLFDSPYYKDSKHRAEYHEFRKKLNLRAQIKDISTKITNT 829
Query: 60 Q-IQKFRDELKNRSRVLKKLGHINADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLD 118
+ I + R ELK R RVL++LG + V+ +KGR AC I +GDELL+ EL+F G FN +
Sbjct: 830 EAIIQLR-ELKIRQRVLRRLGFCTLENVIDIKGRVACEITSGDELLLVELIFQGFFNQMP 888
Query: 119 HHQVAALASCFIPVDKSS-EQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVE 177
++AA SCF+ DKS +NL+ K + E+A++IA + E KL+ N +Y+
Sbjct: 889 PEEIAAALSCFVYEDKSEVSTLNLKEPFKKMYLTIIEAAKRIATVSLESKLQFNESDYLH 948
Query: 178 STVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNL 237
+P +M+ + W GA+F E+ ++ ++EGSI+R+ RRLDE L QL AA +G L
Sbjct: 949 Q-FKPDIMEPVSLWINGASFQEICIVSKLYEGSIVRTFRRLDELLKQLEHAAIVLGNNEL 1007
Query: 238 EKKFAAASESLRRGIMFSNSLYL 260
++K + L R I+FS SLYL
Sbjct: 1008 KEKSVLTEQKLHRDIIFSASLYL 1030
>TAIR|locus:2075566 [details] [associations]
symbol:AT3G46960 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0005773
"vacuole" evidence=IDA] [GO:0006813 "potassium ion transport"
evidence=IMP] [GO:0035864 "response to potassium ion" evidence=IMP]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0031048
"chromatin silencing by small RNA" evidence=RCA] [GO:0045132
"meiotic chromosome segregation" evidence=RCA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005773
EMBL:CP002686 GO:GO:0003676 GO:GO:0006813 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696
Pfam:PF13234 KO:K12599 OMA:TRLDETC IPI:IPI00544785
RefSeq:NP_190280.5 UniGene:At.28750 UniGene:At.48743
ProteinModelPortal:F4JAA5 SMR:F4JAA5 PRIDE:F4JAA5
EnsemblPlants:AT3G46960.1 GeneID:823849 KEGG:ath:AT3G46960
GO:GO:0035864 Uniprot:F4JAA5
Length = 1347
Score = 376 (137.4 bits), Expect = 2.7e-33, P = 2.7e-33
Identities = 86/266 (32%), Positives = 157/266 (59%)
Query: 1 MKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQ 60
+K++D E+V+ + L K+ +NK ++ + ++ EI++ K+ ++D +
Sbjct: 1085 LKLKDAELVETYYKWTNLLQKM---SMNKCHGCVKL---EEHMKLAREIKKHKTDLKDLE 1138
Query: 61 IQKFRDEL------KNRSRVLKKLGHINADGVVQLKGRAACLIDTGDELLVTELMFNGTF 114
Q + L + R VLK +G I+ D VVQ+KGR AC +++G+EL+ T +F F
Sbjct: 1139 FQMSDEALLQMPAFQGRIDVLKNIGCIDDDLVVQIKGRVACEMNSGEELICTVCLFENQF 1198
Query: 115 NDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDE 174
+L+ + A+ S F+ K++ L +LAK Q+L ++A ++ E+Q + L+++ +E
Sbjct: 1199 EELEPEEAVAIMSAFVFQQKNTSAPTLTPKLAKAKQRLYDTAIRLGELQAQYNLQIDPEE 1258
Query: 175 YVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGE 234
Y + ++ L++V+Y W+KG FAE+ ++TD+ EG I+R+ RLDE + + AA +G
Sbjct: 1259 YAQENLKFGLVEVVYEWAKGTPFAEICELTDVPEGLIVRTIVRLDETCREFKNAAAIMGN 1318
Query: 235 VNLEKKFAAASESLRRGIMFSNSLYL 260
L KK AAS +++R I+F+ SLY+
Sbjct: 1319 SALHKKMDAASNAIKRDIVFAASLYV 1344
>ZFIN|ZDB-GENE-010430-5 [details] [associations]
symbol:skiv2l "superkiller viralicidic activity 2 (S.
cerevisiae homolog)-like" species:7955 "Danio rerio" [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-010430-5 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234
GeneTree:ENSGT00690000102154 EMBL:FP102194 EMBL:FP067438
IPI:IPI00490616 Ensembl:ENSDART00000089609 OMA:TIMASAD Bgee:F1R881
Uniprot:F1R881
Length = 1249
Score = 367 (134.2 bits), Expect = 2.1e-32, P = 2.1e-32
Identities = 85/260 (32%), Positives = 147/260 (56%)
Query: 1 MKIEDPEVVDLVNQIEELEHKLFA-HPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDS 59
+ ++ +VV+ V + L+ L H ++ Q Q + V E+ +L + D
Sbjct: 991 LHLKGVDVVEGVMRQRVLQDSLKDFHCIHSPTFSEQFTRVQERMSVQEELDKLLFLVSDQ 1050
Query: 60 QIQKFRDELKNRSRVLKKLGHINADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDH 119
+ E R +VL+ L ++++ G VQLKGR AC I + ELL+TEL+F T + L
Sbjct: 1051 SLTLL-PEYHQRIKVLEALQYVDSSGAVQLKGRVACQISS-HELLLTELLFENTLSPLAP 1108
Query: 120 HQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVEST 179
+ AAL SC + + + ++ L + + Q+ A++I ++Q +C + +++V +
Sbjct: 1109 EESAALLSCLVFTQNTQIEPHITNTLQEGINQVLAVAQRIGDLQRDCGIAQTAEDFV-AQ 1167
Query: 180 VRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEK 239
+ L +V+YCW++G FAE+ Q+TD+ EG+I+R +RLDE L ++R AA+ VG+ L
Sbjct: 1168 FKFGLTEVVYCWARGMPFAEIAQLTDVQEGTIVRCIQRLDEVLKEVRQAARIVGDSVLGS 1227
Query: 240 KFAAASESLRRGIMFSNSLY 259
K AS ++RR I+F+ SLY
Sbjct: 1228 KMERASLAIRRDIVFTASLY 1247
>DICTYBASE|DDB_G0277211 [details] [associations]
symbol:DDB_G0277211 "superkiller viralicidic activity
2-like protein" species:44689 "Dictyostelium discoideum"
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0277211 GO:GO:0005524
GO:GO:0003676 EMBL:AAFI02000019 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG4581 InterPro:IPR025696
Pfam:PF13234 KO:K12599 OMA:TRLDETC RefSeq:XP_642686.1
ProteinModelPortal:Q86K90 EnsemblProtists:DDB0233454 GeneID:8620875
KEGG:ddi:DDB_G0277211 InParanoid:Q86K90 Uniprot:Q86K90
Length = 1378
Score = 338 (124.0 bits), Expect = 3.1e-29, P = 3.1e-29
Identities = 77/263 (29%), Positives = 152/263 (57%)
Query: 1 MKIEDPEVV---DLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMR 57
+K++D + V D + IE+L + H + D + +++ ++ + I+ K
Sbjct: 1118 LKLKDVDFVSTYDHLQSIEKLIPESKCHKCPRLHDHYEQT--EKRYQLQYAIRDAKYTAS 1175
Query: 58 DSQIQKFRDELKNRSRVLKKLGHINADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDL 117
D + K + R +L +LG+I+ + V LKGR + I+T ++L++TEL+F F +L
Sbjct: 1176 DENL-KLMPQFNIRLDILHELGYIDDENTVTLKGRVSREINTCEDLVITELIFENAFINL 1234
Query: 118 DHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVE 177
+ +V ++ SC I +K + Q +L L + Q L ++A K +++++ L+V D+ +E
Sbjct: 1235 EPSEVVSVLSCLIFQEKDAVQPSLTPRLEEAKQNLIKTAEKTYKVESDKGLDVVPDDKLE 1294
Query: 178 STVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNL 237
+T++ LM V+Y W++G F ++ +T++ EGSI+R+ R+ E ++R AA+ +G+ L
Sbjct: 1295 TTLKFGLMQVVYEWARGTPFNDICTLTNVLEGSIVRAITRIGETCQEVRNAARVIGDTKL 1354
Query: 238 EKKFAAASESLRRGIMFSNSLYL 260
+K A ++R I+F++SLY+
Sbjct: 1355 LQKMEEAMRLIKRDIVFTSSLYV 1377
>POMBASE|SPCC550.03c [details] [associations]
symbol:SPCC550.03c "Ski complex RNA helicase Ski2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006402 "mRNA catabolic
process" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0055087 "Ski complex" evidence=ISO]
[GO:0071276 "cellular response to cadmium ion" evidence=IMP]
[GO:0071585 "detoxification of cadmium ion" evidence=IMP]
[GO:2000765 "regulation of cytoplasmic translation" evidence=ISO]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 PomBase:SPCC550.03c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005730 GO:GO:2000765
EMBL:CU329672 GO:GO:0071276 GO:GO:0071585 GO:GO:0003723
GO:GO:0006402 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0003724 eggNOG:COG4581 GO:GO:0055087 PIR:T41378
RefSeq:NP_588095.1 ProteinModelPortal:O59801 STRING:O59801
EnsemblFungi:SPCC550.03c.1 GeneID:2538841 KEGG:spo:SPCC550.03c
HOGENOM:HOG000163048 KO:K12599 OMA:TRLDETC OrthoDB:EOG4WM82R
NextBio:20800023 Uniprot:O59801
Length = 1213
Score = 337 (123.7 bits), Expect = 3.3e-29, P = 3.3e-29
Identities = 82/261 (31%), Positives = 138/261 (52%)
Query: 2 KIEDPEVVDLVNQIEELEHKLFAHPLNKSQDE-NQIRCFQRKAEVNHEIQQLKSKMRDSQ 60
K+ D E + + L++KL +P+ + + ++ E+ I L S + D
Sbjct: 954 KVRDFEFCEAFEKRNFLQNKLSGNPIISTPNFLTHFALAYQEYELESNIDNLSSYISDQN 1013
Query: 61 IQKFRDELKNRSRVLKKLGHINADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHH 120
++ D + R +VL++LG+I+A+ V LKGR AC I++ EL++TEL+ + D
Sbjct: 1014 LELLPD-YEQRIKVLQELGYIDAERTVLLKGRVACEINSTSELVLTELILENSLADFSCE 1072
Query: 121 QVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECK-LEVNVDEYVEST 179
+ AL S F+ +K+ + + L K + + A K+ +IQ + L N ES
Sbjct: 1073 ETIALLSAFVFDEKTEVEPTISPHLQKGKEMILSVAEKVNQIQEHYQVLYFNEGNDFESQ 1132
Query: 180 VRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEK 239
R LM+V Y W++G +F + +TD+ EGSI+R+ RLDE L + R AA+ VG+ ++
Sbjct: 1133 PRFGLMEVCYEWARGMSFNRITDLTDVLEGSIVRTIIRLDEVLRECRGAARVVGDSSMYT 1192
Query: 240 KFAAASESLRRGIMFSNSLYL 260
K +RR I+F SLY+
Sbjct: 1193 KMEECQNLIRRNIVFCPSLYM 1213
>ASPGD|ASPL0000004985 [details] [associations]
symbol:AN6007 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:BN001301 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000102 GO:GO:0008026 eggNOG:COG4581
HOGENOM:HOG000163048 KO:K12599 OMA:TRLDETC OrthoDB:EOG4WM82R
RefSeq:XP_663611.1 ProteinModelPortal:Q5B0C3 STRING:Q5B0C3
EnsemblFungi:CADANIAT00007011 GeneID:2871132 KEGG:ani:AN6007.2
Uniprot:Q5B0C3
Length = 1293
Score = 326 (119.8 bits), Expect = 5.4e-28, P = 5.4e-28
Identities = 70/219 (31%), Positives = 124/219 (56%)
Query: 44 EVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHINADGVVQLKGRAACLIDTGDEL 103
++ I QLK M D +Q D + R +VLK LG ++ VQLKG+ AC I + DEL
Sbjct: 1076 QIKENISQLKQLMSDQNLQLLPD-YEQRIQVLKDLGFVDEQSRVQLKGKVACEIHSADEL 1134
Query: 104 LVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQ 163
++TEL+ + + ++ AL S F+ +K+ L L K + + + K+ ++Q
Sbjct: 1135 VLTELILENVLAEYEPEEIVALLSAFVFQEKTENVPTLNPRLEKGKEAIIRISEKVNDVQ 1194
Query: 164 NECKLEVNVDEYVESTVRP-F-LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEF 221
+ ++ + ++ + +P F L +V+Y W+KG +F + +TD+ EG+I+R+ RLDE
Sbjct: 1195 IQHQVLQSTEDINDFASQPRFGLAEVVYEWAKGMSFNRITDLTDVMEGTIVRTITRLDET 1254
Query: 222 LNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 260
+++ AA+ VG+ L K A E ++R ++F+ SLY+
Sbjct: 1255 CREVKNAAKLVGDPTLYAKMQEAQEKIKRDVIFAASLYM 1293
>UNIPROTKB|F5H6Y7 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 EMBL:AL844853 EMBL:AL662849 EMBL:BX005143
EMBL:CR759782 EMBL:CR753822 EMBL:CR753845 InterPro:IPR025696
Pfam:PF13234 HGNC:HGNC:10898 ChiTaRS:SKIV2L IPI:IPI00946735
SMR:F5H6Y7 Ensembl:ENST00000547025 Ensembl:ENST00000547224
Ensembl:ENST00000547296 Ensembl:ENST00000548561
Ensembl:ENST00000552010 Uniprot:F5H6Y7
Length = 880
Score = 304 (112.1 bits), Expect = 5.3e-27, Sum P(2) = 5.3e-27
Identities = 81/263 (30%), Positives = 143/263 (54%)
Query: 1 MKIEDPEVVDLVNQIEELEHKLF-AHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDS 59
++++D VV+ + +LE + A ++ + Q + + ++ E+++L+ + D
Sbjct: 622 LQLKDMSVVEGGLRARKLEELIQGAQCVHSPRFPAQYLKLRERMQIQKEMERLRFLLSDQ 681
Query: 60 QIQKFRDELKNRSRVLKKLGHINADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDH 119
+ E R VL+ LG+++ G V+L GR AC + + ELL+TELMF+ + L
Sbjct: 682 SLLLL-PEYHQRVEVLRTLGYVDEAGTVKLAGRVACAMSS-HELLLTELMFDNALSTLRP 739
Query: 120 HQVAALAS---CFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYV 176
++AAL S C P D + N L + +++++ A++I E+Q C L V+E+V
Sbjct: 740 EEIAALLSGLVCQSPGDAGDQLPNT---LKQGIERVRAVAKRIGEVQVACGLNQTVEEFV 796
Query: 177 ESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVN 236
+ L++V+Y W++G F+E+ ++ EG ++R +RL E LR AA+ VGE
Sbjct: 797 -GELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPV 855
Query: 237 LEKKFAAASESLRRGIMFSNSLY 259
L K A+ LRR I+F+ SLY
Sbjct: 856 LGAKMETAATLLRRDIVFAASLY 878
Score = 36 (17.7 bits), Expect = 5.3e-27, Sum P(2) = 5.3e-27
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 4 EDPEVVDLVNQIEELEHKLFAHP 26
+DP + + ++EL AHP
Sbjct: 588 KDPPLAAVTTAVQELLRLAQAHP 610
>UNIPROTKB|F5H7B0 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL662849 EMBL:AL645922
InterPro:IPR025696 Pfam:PF13234 HGNC:HGNC:10898 ChiTaRS:SKIV2L
IPI:IPI01021910 SMR:F5H7B0 Ensembl:ENST00000544581
Ensembl:ENST00000546549 Uniprot:F5H7B0
Length = 1053
Score = 304 (112.1 bits), Expect = 9.9e-27, Sum P(2) = 9.9e-27
Identities = 81/263 (30%), Positives = 143/263 (54%)
Query: 1 MKIEDPEVVDLVNQIEELEHKLF-AHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDS 59
++++D VV+ + +LE + A ++ + Q + + ++ E+++L+ + D
Sbjct: 795 LQLKDMSVVEGGLRARKLEELIQGAQCVHSPRFPAQYLKLRERMQIQKEMERLRFLLSDQ 854
Query: 60 QIQKFRDELKNRSRVLKKLGHINADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDH 119
+ E R VL+ LG+++ G V+L GR AC + + ELL+TELMF+ + L
Sbjct: 855 SLLLL-PEYHQRVEVLRTLGYVDEAGTVKLAGRVACAMSS-HELLLTELMFDNALSTLRP 912
Query: 120 HQVAALAS---CFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYV 176
++AAL S C P D + N L + +++++ A++I E+Q C L V+E+V
Sbjct: 913 EEIAALLSGLVCQSPGDAGDQLPNT---LKQGIERVRAVAKRIGEVQVACGLNQTVEEFV 969
Query: 177 ESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVN 236
+ L++V+Y W++G F+E+ ++ EG ++R +RL E LR AA+ VGE
Sbjct: 970 -GELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPV 1028
Query: 237 LEKKFAAASESLRRGIMFSNSLY 259
L K A+ LRR I+F+ SLY
Sbjct: 1029 LGAKMETAATLLRRDIVFAASLY 1051
Score = 36 (17.7 bits), Expect = 9.9e-27, Sum P(2) = 9.9e-27
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 4 EDPEVVDLVNQIEELEHKLFAHP 26
+DP + + ++EL AHP
Sbjct: 761 KDPPLAAVTTAVQELLRLAQAHP 783
>UNIPROTKB|F8VS23 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL844853 EMBL:BX005143
EMBL:CR759782 EMBL:CR753822 EMBL:CR753845 InterPro:IPR025696
Pfam:PF13234 HGNC:HGNC:10898 ChiTaRS:SKIV2L IPI:IPI00945125
SMR:F8VS23 Ensembl:ENST00000546908 Ensembl:ENST00000552714
Ensembl:ENST00000552746 Ensembl:ENST00000553255 UCSC:uc011ghl.1
Uniprot:F8VS23
Length = 1053
Score = 304 (112.1 bits), Expect = 9.9e-27, Sum P(2) = 9.9e-27
Identities = 81/263 (30%), Positives = 143/263 (54%)
Query: 1 MKIEDPEVVDLVNQIEELEHKLF-AHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDS 59
++++D VV+ + +LE + A ++ + Q + + ++ E+++L+ + D
Sbjct: 795 LQLKDMSVVEGGLRARKLEELIQGAQCVHSPRFPAQYLKLRERMQIQKEMERLRFLLSDQ 854
Query: 60 QIQKFRDELKNRSRVLKKLGHINADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDH 119
+ E R VL+ LG+++ G V+L GR AC + + ELL+TELMF+ + L
Sbjct: 855 SLLLL-PEYHQRVEVLRTLGYVDEAGTVKLAGRVACAMSS-HELLLTELMFDNALSTLRP 912
Query: 120 HQVAALAS---CFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYV 176
++AAL S C P D + N L + +++++ A++I E+Q C L V+E+V
Sbjct: 913 EEIAALLSGLVCQSPGDAGDQLPNT---LKQGIERVRAVAKRIGEVQVACGLNQTVEEFV 969
Query: 177 ESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVN 236
+ L++V+Y W++G F+E+ ++ EG ++R +RL E LR AA+ VGE
Sbjct: 970 -GELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPV 1028
Query: 237 LEKKFAAASESLRRGIMFSNSLY 259
L K A+ LRR I+F+ SLY
Sbjct: 1029 LGAKMETAATLLRRDIVFAASLY 1051
Score = 36 (17.7 bits), Expect = 9.9e-27, Sum P(2) = 9.9e-27
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 4 EDPEVVDLVNQIEELEHKLFAHP 26
+DP + + ++EL AHP
Sbjct: 761 KDPPLAAVTTAVQELLRLAQAHP 783
>UNIPROTKB|B4DM01 [details] [associations]
symbol:SKIV2L "cDNA FLJ57529, highly similar to Helicase
SKI2W (EC 3.6.1.-)" species:9606 "Homo sapiens" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL662849 eggNOG:COG4581
InterPro:IPR025696 Pfam:PF13234 UniGene:Hs.89864 HGNC:HGNC:10898
HOVERGEN:HBG060025 OrthoDB:EOG47H5P5 ChiTaRS:SKIV2L EMBL:AK297230
IPI:IPI01014021 SMR:B4DM01 STRING:B4DM01 Ensembl:ENST00000551164
Uniprot:B4DM01
Length = 1088
Score = 304 (112.1 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 81/263 (30%), Positives = 143/263 (54%)
Query: 1 MKIEDPEVVDLVNQIEELEHKLF-AHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDS 59
++++D VV+ + +LE + A ++ + Q + + ++ E+++L+ + D
Sbjct: 830 LQLKDMSVVEGGLRARKLEELIQGAQCVHSPRFPAQYLKLRERMQIQKEMERLRFLLSDQ 889
Query: 60 QIQKFRDELKNRSRVLKKLGHINADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDH 119
+ E R VL+ LG+++ G V+L GR AC + + ELL+TELMF+ + L
Sbjct: 890 SLLLL-PEYHQRVEVLRTLGYVDEAGTVKLAGRVACAMSS-HELLLTELMFDNALSTLRP 947
Query: 120 HQVAALAS---CFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYV 176
++AAL S C P D + N L + +++++ A++I E+Q C L V+E+V
Sbjct: 948 EEIAALLSGLVCQSPGDAGDQLPNT---LKQGIERVRAVAKRIGEVQVACGLNQTVEEFV 1004
Query: 177 ESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVN 236
+ L++V+Y W++G F+E+ ++ EG ++R +RL E LR AA+ VGE
Sbjct: 1005 -GELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPV 1063
Query: 237 LEKKFAAASESLRRGIMFSNSLY 259
L K A+ LRR I+F+ SLY
Sbjct: 1064 LGAKMETAATLLRRDIVFAASLY 1086
Score = 36 (17.7 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 4 EDPEVVDLVNQIEELEHKLFAHP 26
+DP + + ++EL AHP
Sbjct: 796 KDPPLAAVTTAVQELLRLAQAHP 818
>UNIPROTKB|F8VNU1 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL844853 EMBL:BX005143
EMBL:CR759782 EMBL:CR753822 EMBL:CR753845 InterPro:IPR025696
Pfam:PF13234 HGNC:HGNC:10898 ChiTaRS:SKIV2L IPI:IPI01022196
SMR:F8VNU1 Ensembl:ENST00000546742 Ensembl:ENST00000547054
Ensembl:ENST00000550012 Ensembl:ENST00000550640 UCSC:uc011ghk.1
Uniprot:F8VNU1
Length = 1088
Score = 304 (112.1 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 81/263 (30%), Positives = 143/263 (54%)
Query: 1 MKIEDPEVVDLVNQIEELEHKLF-AHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDS 59
++++D VV+ + +LE + A ++ + Q + + ++ E+++L+ + D
Sbjct: 830 LQLKDMSVVEGGLRARKLEELIQGAQCVHSPRFPAQYLKLRERMQIQKEMERLRFLLSDQ 889
Query: 60 QIQKFRDELKNRSRVLKKLGHINADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDH 119
+ E R VL+ LG+++ G V+L GR AC + + ELL+TELMF+ + L
Sbjct: 890 SLLLL-PEYHQRVEVLRTLGYVDEAGTVKLAGRVACAMSS-HELLLTELMFDNALSTLRP 947
Query: 120 HQVAALAS---CFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYV 176
++AAL S C P D + N L + +++++ A++I E+Q C L V+E+V
Sbjct: 948 EEIAALLSGLVCQSPGDAGDQLPNT---LKQGIERVRAVAKRIGEVQVACGLNQTVEEFV 1004
Query: 177 ESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVN 236
+ L++V+Y W++G F+E+ ++ EG ++R +RL E LR AA+ VGE
Sbjct: 1005 -GELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPV 1063
Query: 237 LEKKFAAASESLRRGIMFSNSLY 259
L K A+ LRR I+F+ SLY
Sbjct: 1064 LGAKMETAATLLRRDIVFAASLY 1086
Score = 36 (17.7 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 4 EDPEVVDLVNQIEELEHKLFAHP 26
+DP + + ++EL AHP
Sbjct: 796 KDPPLAAVTTAVQELLRLAQAHP 818
>GENEDB_PFALCIPARUM|PFF0100w [details] [associations]
symbol:PFF0100w "putative ATP dependent RNA
helicase" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:AL844505 HOGENOM:HOG000163047 KO:K12598
InterPro:IPR025696 Pfam:PF13234 RefSeq:XP_966011.1
ProteinModelPortal:C6KSM1 EnsemblProtists:PFF0100w:mRNA
GeneID:3885738 KEGG:pfa:PFF0100w EuPathDB:PlasmoDB:PF3D7_0602100
OMA:RGIVIIM ProtClustDB:CLSZ2433467 Uniprot:C6KSM1
Length = 1350
Score = 313 (115.2 bits), Expect = 1.4e-26, P = 1.4e-26
Identities = 70/225 (31%), Positives = 129/225 (57%)
Query: 44 EVNHEIQQLKSKMRDSQIQK-FRDELKNRSRVLK------KLGHINADGVVQLKGRAACL 96
EV++ ++ LK++ I+ + +KN R++ K H + VV +KG+ A
Sbjct: 1128 EVSYNLENLKNEKDIKTIENSITEHIKNE-RIMNIKNETYKNNHEEKNYVVTMKGQIASA 1186
Query: 97 IDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRME-LAKPLQQLQES 155
I + DEL+++EL F+ F+ ++ + A SCF+ + +S++I + L + QQ+ ++
Sbjct: 1187 ILSVDELVISELFFSNFFSKYNYDYICAFLSCFVYDESTSKEITINDPILVEGYQQIIKT 1246
Query: 156 ARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSA 215
A +A NEC + +N+ +Y++ + +M + W++G +F E++ + I+EGSIIR+
Sbjct: 1247 ANHVATKMNECGMNINLKDYIDK-FKSAIMPIALLWARGHSFVEILSDSQIYEGSIIRTL 1305
Query: 216 RRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 260
RRLDE + Q+ A + + ++ + A+ LRRGI FS SLYL
Sbjct: 1306 RRLDELIRQMICAFRGINNDSMCETLTLATNKLRRGIPFSPSLYL 1350
>UNIPROTKB|Q15477 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0055087 "Ski
complex" evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=TAS] Reactome:REACT_17015 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 EMBL:AF019413 EMBL:AL662849 EMBL:AL645922
eggNOG:COG4581 InterPro:IPR025696 Pfam:PF13234 GO:GO:0055087
HOGENOM:HOG000163048 KO:K12599 OMA:TRLDETC EMBL:U09877 EMBL:X98378
EMBL:Z48796 IPI:IPI00414819 PIR:S56752 RefSeq:NP_008860.4
UniGene:Hs.89864 ProteinModelPortal:Q15477 SMR:Q15477 IntAct:Q15477
STRING:Q15477 PhosphoSite:Q15477 DMDM:3123284 PaxDb:Q15477
PRIDE:Q15477 DNASU:6499 Ensembl:ENST00000375394
Ensembl:ENST00000383336 Ensembl:ENST00000412823
Ensembl:ENST00000421789 Ensembl:ENST00000429465
Ensembl:ENST00000448219 GeneID:6499 KEGG:hsa:6499 UCSC:uc003nyn.1
CTD:6499 GeneCards:GC06P031926 H-InvDB:HIX0005742
H-InvDB:HIX0166115 H-InvDB:HIX0166390 H-InvDB:HIX0166908
H-InvDB:HIX0167165 H-InvDB:HIX0167404 HGNC:HGNC:10898 MIM:600478
MIM:614602 neXtProt:NX_Q15477 Orphanet:84064 PharmGKB:PA35798
HOVERGEN:HBG060025 InParanoid:Q15477 OrthoDB:EOG47H5P5
PhylomeDB:Q15477 ChiTaRS:SKIV2L GenomeRNAi:6499 NextBio:25263
ArrayExpress:Q15477 Bgee:Q15477 CleanEx:HS_SKIV2L
Genevestigator:Q15477 Uniprot:Q15477
Length = 1246
Score = 304 (112.1 bits), Expect = 1.7e-26, Sum P(2) = 1.7e-26
Identities = 81/263 (30%), Positives = 143/263 (54%)
Query: 1 MKIEDPEVVDLVNQIEELEHKLF-AHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDS 59
++++D VV+ + +LE + A ++ + Q + + ++ E+++L+ + D
Sbjct: 988 LQLKDMSVVEGGLRARKLEELIQGAQCVHSPRFPAQYLKLRERMQIQKEMERLRFLLSDQ 1047
Query: 60 QIQKFRDELKNRSRVLKKLGHINADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDH 119
+ E R VL+ LG+++ G V+L GR AC + + ELL+TELMF+ + L
Sbjct: 1048 SLLLL-PEYHQRVEVLRTLGYVDEAGTVKLAGRVACAMSS-HELLLTELMFDNALSTLRP 1105
Query: 120 HQVAALAS---CFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYV 176
++AAL S C P D + N L + +++++ A++I E+Q C L V+E+V
Sbjct: 1106 EEIAALLSGLVCQSPGDAGDQLPNT---LKQGIERVRAVAKRIGEVQVACGLNQTVEEFV 1162
Query: 177 ESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVN 236
+ L++V+Y W++G F+E+ ++ EG ++R +RL E LR AA+ VGE
Sbjct: 1163 -GELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPV 1221
Query: 237 LEKKFAAASESLRRGIMFSNSLY 259
L K A+ LRR I+F+ SLY
Sbjct: 1222 LGAKMETAATLLRRDIVFAASLY 1244
Score = 36 (17.7 bits), Expect = 1.7e-26, Sum P(2) = 1.7e-26
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 4 EDPEVVDLVNQIEELEHKLFAHP 26
+DP + + ++EL AHP
Sbjct: 954 KDPPLAAVTTAVQELLRLAQAHP 976
>CGD|CAL0002171 [details] [associations]
symbol:orf19.6425 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0055087 "Ski complex" evidence=IEA]
[GO:0070478 "nuclear-transcribed mRNA catabolic process, 3'-5'
exonucleolytic nonsense-mediated decay" evidence=IEA] [GO:0070481
"nuclear-transcribed mRNA catabolic process, non-stop decay"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
CGD:CAL0002171 GO:GO:0005524 GO:GO:0003676 EMBL:AACQ01000073
EMBL:AACQ01000072 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG4581 KO:K12599 RefSeq:XP_716180.1
RefSeq:XP_716263.1 ProteinModelPortal:Q5A337 STRING:Q5A337
GeneID:3642143 GeneID:3642220 KEGG:cal:CaO19.13783
KEGG:cal:CaO19.6425 Uniprot:Q5A337
Length = 1245
Score = 310 (114.2 bits), Expect = 2.6e-26, P = 2.6e-26
Identities = 73/222 (32%), Positives = 130/222 (58%)
Query: 45 VNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHINADGVVQLKGRAACLIDTGDELL 104
++ E+++L+ + D ++ D + R +VL+ +G+I+ V LKGR AC +++G EL+
Sbjct: 1028 LSQEVEKLERLISDENLELLPD-YEQRLQVLEAMGYIDEQHNVVLKGRVACEVNSGWELI 1086
Query: 105 VTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQ----INLRMELAKPLQQLQESARKIA 160
+TEL+ N D + ++ AL SCF+ ++ E+ I R+E K ++ E A K+
Sbjct: 1087 ITELVLNNFLGDFEPAEIVALLSCFVYEGRTQEEEPPLITPRLEKGKA--KILEIAEKLL 1144
Query: 161 EIQNECKLEVNVDE--YVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRL 218
++ E ++ + +E +VES R L +V+Y W+ G +F E++Q++ EG+I+R RL
Sbjct: 1145 KVYVEKQVSLTSEEEDFVESK-RFALANVVYEWANGLSFNEIMQISVEAEGTIVRVITRL 1203
Query: 219 DEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 260
DE +++ AA +G+ L K A E ++R I+F SLYL
Sbjct: 1204 DEICREVKNAALIIGDSTLHLKMVEAQEKIKRDIVFCASLYL 1245
>UNIPROTKB|E2RSD6 [details] [associations]
symbol:SKIV2L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0055087 "Ski complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234
GO:GO:0055087 KO:K12599 OMA:TRLDETC GeneTree:ENSGT00690000102154
CTD:6499 EMBL:AAEX03008222 RefSeq:XP_538841.2
ProteinModelPortal:E2RSD6 Ensembl:ENSCAFT00000001053 GeneID:481720
KEGG:cfa:481720 NextBio:20856463 Uniprot:E2RSD6
Length = 1246
Score = 310 (114.2 bits), Expect = 2.6e-26, P = 2.6e-26
Identities = 84/263 (31%), Positives = 145/263 (55%)
Query: 1 MKIEDPEVVDLVNQIEELEHKLF-AHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDS 59
++++D VV+ + +LE ++ A ++ + Q + + ++ E+++L+ + D
Sbjct: 988 LQLKDVSVVEGGLRARKLEELIWGAQCVHSPRFSAQYVKLRERMQIQKEMERLRFLLSDQ 1047
Query: 60 QIQKFRDELKNRSRVLKKLGHINADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDH 119
+ E R VL+ LG+++ G V+L GR AC + + ELL+TELMF+ + L
Sbjct: 1048 SLLLL-PEYHQRVEVLRTLGYVDEAGTVKLAGRVACAMSS-HELLLTELMFDNALSALRP 1105
Query: 120 HQVAALAS---CFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYV 176
++AAL S C P D EQ L L + +++++ AR+I E+Q C L V+E+V
Sbjct: 1106 EEIAALLSGLVCQSPGDPG-EQ--LPSTLKQGVERVRAVARRIGEVQVACGLNQTVEEFV 1162
Query: 177 ESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVN 236
+ L++V+Y W++G F+E+ ++ EG ++R +RL E LR AA+ VGE
Sbjct: 1163 -GELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPV 1221
Query: 237 LEKKFAAASESLRRGIMFSNSLY 259
L K A+ LRR I+F+ SLY
Sbjct: 1222 LGAKMETAATLLRRDIVFAASLY 1244
>UNIPROTKB|F1RQW4 [details] [associations]
symbol:SKIV2L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0055087 "Ski complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234
GO:GO:0055087 OMA:TRLDETC GeneTree:ENSGT00690000102154
EMBL:CT956038 Ensembl:ENSSSCT00000001566 ArrayExpress:F1RQW4
Uniprot:F1RQW4
Length = 1246
Score = 305 (112.4 bits), Expect = 8.8e-26, P = 8.8e-26
Identities = 82/263 (31%), Positives = 143/263 (54%)
Query: 1 MKIEDPEVVDLVNQIEELEHKLF-AHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDS 59
++++D VV+ + +LE + A ++ + Q + + ++ E+++L+ + D
Sbjct: 988 LQLKDVSVVEGGLRARKLEELIRGAQCVHSPRFPAQYVKLRERMQIQKEMERLRFLLSDQ 1047
Query: 60 QIQKFRDELKNRSRVLKKLGHINADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDH 119
+ E R VL+ LG+++ G V+L GR AC + + ELL+TELMF+ + L
Sbjct: 1048 SLLLL-PEYHQRVEVLRTLGYVDEAGTVKLAGRVACAMSS-HELLLTELMFDNALSALRP 1105
Query: 120 HQVAALAS---CFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYV 176
++AAL S C P D + L L + ++++Q A++I E+Q C L V+E+V
Sbjct: 1106 EEIAALLSGLVCQSPGDPGDQ---LPSTLKQGVERVQAVAKRIGEVQVACGLNQTVEEFV 1162
Query: 177 ESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVN 236
+ L++V+Y W++G F+E+ ++ EG ++R +RL E LR AA+ VGE
Sbjct: 1163 -GELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPV 1221
Query: 237 LEKKFAAASESLRRGIMFSNSLY 259
L K A+ LRR I+F+ SLY
Sbjct: 1222 LGAKMETAATLLRRDIVFAASLY 1244
>UNIPROTKB|F1LP39 [details] [associations]
symbol:Skiv2l "Protein Skiv2l" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 RGD:1303059 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234 GO:GO:0055087
OMA:TRLDETC GeneTree:ENSGT00690000102154 IPI:IPI00417365
Ensembl:ENSRNOT00000000481 Uniprot:F1LP39
Length = 1206
Score = 304 (112.1 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 82/263 (31%), Positives = 143/263 (54%)
Query: 1 MKIEDPEVVDLVNQIEELEHKLF-AHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDS 59
++++D VV+ + +LE + A ++ + Q Q + ++ E+++L+ + D
Sbjct: 948 LQLKDVAVVEGGLRARKLEELIRGAQCVHSPRFPAQYVKLQERMQIQKEMERLRFLLSDQ 1007
Query: 60 QIQKFRDELKNRSRVLKKLGHINADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDH 119
+ E R VL+ LG+++ G V+L GR AC + + ELL+TELMF+ + L
Sbjct: 1008 SLLLL-PEYHQRVEVLRTLGYVDEAGTVKLAGRVACAMSS-HELLLTELMFDNALSALRP 1065
Query: 120 HQVAALAS---CFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYV 176
++AAL S C P D + L L + +++++ A++I E+Q C L V+E+V
Sbjct: 1066 EEIAALLSGLVCQSPGDPGDQ---LPSTLKQGVERVKAVAKRIGEVQVACGLNQTVEEFV 1122
Query: 177 ESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVN 236
+ L++V+Y W++G F+E+ ++ EG ++R +RL E LR AA+ VGE
Sbjct: 1123 -GELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPV 1181
Query: 237 LEKKFAAASESLRRGIMFSNSLY 259
L K A+ LRR I+F+ SLY
Sbjct: 1182 LGAKMETAATLLRRDIVFAASLY 1204
>RGD|1303059 [details] [associations]
symbol:Skiv2l "superkiller viralicidic activity 2-like (S.
cerevisiae )" species:10116 "Rattus norvegicus" [GO:0055087 "Ski
complex" evidence=ISO] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
RGD:1303059 GO:GO:0005524 GO:GO:0003676 EMBL:BX883045
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG4581 InterPro:IPR025696 Pfam:PF13234 HOGENOM:HOG000163048
KO:K12599 CTD:6499 HOVERGEN:HBG060025 OrthoDB:EOG47H5P5
IPI:IPI00417365 RefSeq:NP_998724.1 UniGene:Rn.138027
ProteinModelPortal:Q6MG76 IntAct:Q6MG76 PhosphoSite:Q6MG76
PRIDE:Q6MG76 GeneID:294260 KEGG:rno:294260 UCSC:RGD:1303059
InParanoid:Q6MG76 NextBio:637849 ArrayExpress:Q6MG76
Genevestigator:Q6MG76 Uniprot:Q6MG76
Length = 1241
Score = 304 (112.1 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 82/263 (31%), Positives = 143/263 (54%)
Query: 1 MKIEDPEVVDLVNQIEELEHKLF-AHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDS 59
++++D VV+ + +LE + A ++ + Q Q + ++ E+++L+ + D
Sbjct: 983 LQLKDVAVVEGGLRARKLEELIRGAQCVHSPRFPAQYVKLQERMQIQKEMERLRFLLSDQ 1042
Query: 60 QIQKFRDELKNRSRVLKKLGHINADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDH 119
+ E R VL+ LG+++ G V+L GR AC + + ELL+TELMF+ + L
Sbjct: 1043 SLLLL-PEYHQRVEVLRTLGYVDEAGTVKLAGRVACAMSS-HELLLTELMFDNALSALRP 1100
Query: 120 HQVAALAS---CFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYV 176
++AAL S C P D + L L + +++++ A++I E+Q C L V+E+V
Sbjct: 1101 EEIAALLSGLVCQSPGDPGDQ---LPSTLKQGVERVKAVAKRIGEVQVACGLNQTVEEFV 1157
Query: 177 ESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVN 236
+ L++V+Y W++G F+E+ ++ EG ++R +RL E LR AA+ VGE
Sbjct: 1158 -GELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPV 1216
Query: 237 LEKKFAAASESLRRGIMFSNSLY 259
L K A+ LRR I+F+ SLY
Sbjct: 1217 LGAKMETAATLLRRDIVFAASLY 1239
>UNIPROTKB|E1BMS0 [details] [associations]
symbol:LOC100139548 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0055087 "Ski complex" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234
GO:GO:0055087 OMA:TRLDETC GeneTree:ENSGT00690000102154
EMBL:DAAA02055371 IPI:IPI00690289 RefSeq:XP_003583920.1
RefSeq:XP_003587743.1 Ensembl:ENSBTAT00000007339 GeneID:100139548
KEGG:bta:100139548 Uniprot:E1BMS0
Length = 1246
Score = 304 (112.1 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 81/263 (30%), Positives = 143/263 (54%)
Query: 1 MKIEDPEVVDLVNQIEELEHKLF-AHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDS 59
++++D VV+ + +LE + A ++ + Q + + ++ E+++L+ + D
Sbjct: 988 LQLKDVSVVEGGLRARKLEELIRGAQCVHSPRFPAQYLKLRERMQIQKEMERLRFLLSDQ 1047
Query: 60 QIQKFRDELKNRSRVLKKLGHINADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDH 119
+ E R VL+ LG+++ G V+L GR AC + + ELL+TELMF+ + L
Sbjct: 1048 SLLLL-PEYHQRVEVLRTLGYVDEAGTVKLAGRVACAMSS-HELLLTELMFDNALSTLRP 1105
Query: 120 HQVAALAS---CFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYV 176
++AAL S C P D + L L + +++++ A++I E+Q C L V+E+V
Sbjct: 1106 EEIAALLSGLVCQSPGDPGDQ---LPSTLKQGVERVRTVAKRIGEVQAACGLNQTVEEFV 1162
Query: 177 ESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVN 236
+ L++V+Y W++G F+E+ ++ EG ++R +RL E LR AA+ VGE
Sbjct: 1163 -GELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPV 1221
Query: 237 LEKKFAAASESLRRGIMFSNSLY 259
L K A+ LRR I+F+ SLY
Sbjct: 1222 LGAKMETAATLLRRDIVFAASLY 1244
>UNIPROTKB|F1MJX4 [details] [associations]
symbol:SKIV2L2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0000460 "maturation of 5.8S rRNA" evidence=IEA] [GO:0000178
"exosome (RNase complex)" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0000178 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000460 GO:GO:0008026
GeneTree:ENSGT00690000102230 OMA:ENFQKAM InterPro:IPR025696
Pfam:PF13234 EMBL:DAAA02050346 EMBL:DAAA02050343 EMBL:DAAA02050344
EMBL:DAAA02050345 IPI:IPI00839454 Ensembl:ENSBTAT00000047363
Uniprot:F1MJX4
Length = 937
Score = 295 (108.9 bits), Expect = 6.5e-25, P = 6.5e-25
Identities = 61/157 (38%), Positives = 98/157 (62%)
Query: 1 MKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKMRDS 59
M I+D + ++ ++E EH++++HPL+ + E ++KA++ +I+ K +++ +
Sbjct: 781 MGIQDQGLKKVIQKVEAFEHRMYSHPLHNDPNLETVYTLCEKKAQIAIDIKSAKRELKKA 840
Query: 60 QIQKFRDELKNRSRVLKKLGHINADGVVQLKGRAACLID---TGDELLVTELMFNGTFND 116
+ DELK R RVL++LG + V+++KGR AC I + DELL+TE+MFNG FND
Sbjct: 841 RTVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVACEISRWYSADELLLTEMMFNGLFND 900
Query: 117 LDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQ 153
L Q AL SCF+ + SSE L +LA PL+Q+Q
Sbjct: 901 LSAEQATALLSCFVFQENSSEMPKLTEQLAGPLRQMQ 937
>SGD|S000004390 [details] [associations]
symbol:SKI2 "Ski complex component and putative RNA helicase"
species:4932 "Saccharomyces cerevisiae" [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0070478
"nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic
nonsense-mediated decay" evidence=IGI;IMP] [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0055087 "Ski
complex" evidence=IDA;IPI] [GO:0034427 "nuclear-transcribed mRNA
catabolic process, exonucleolytic, 3'-5'" evidence=IMP] [GO:0070481
"nuclear-transcribed mRNA catabolic process, non-stop decay"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006417 "regulation of translation" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0051607 "defense
response to virus" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 SGD:S000004390 GO:GO:0005524
GO:GO:0006417 GO:GO:0003677 EMBL:BK006945 GO:GO:0051607
GO:GO:0003723 EMBL:U19729 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:Z18944 EMBL:L13469 GO:GO:0008026 GO:GO:0003724
GO:GO:0070478 GO:GO:0070481 eggNOG:COG4581 KO:K05544
RefSeq:NP_013505.4 GeneID:851117 KEGG:sce:YLR401C
InterPro:IPR025696 Pfam:PF13234 GO:GO:0055087 HOGENOM:HOG000163048
KO:K12599 OMA:TRLDETC OrthoDB:EOG4WM82R PIR:S55954
RefSeq:NP_013502.3 PDB:4A4K PDB:4A4Z PDBsum:4A4K PDBsum:4A4Z
ProteinModelPortal:P35207 SMR:P35207 DIP:DIP-5887N IntAct:P35207
MINT:MINT-662639 STRING:P35207 PaxDb:P35207 PeptideAtlas:P35207
EnsemblFungi:YLR398C GeneID:851114 KEGG:sce:YLR398C CYGD:YLR398c
GeneTree:ENSGT00690000102154 NextBio:967830 Genevestigator:P35207
GermOnline:YLR398C Uniprot:P35207
Length = 1287
Score = 274 (101.5 bits), Expect = 1.9e-22, P = 1.9e-22
Identities = 71/223 (31%), Positives = 123/223 (55%)
Query: 42 KAEV-NHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHINADGVVQLKGRAACLIDTG 100
KA V +I++L M D + D K R VLK I+ + V LKGR AC I++G
Sbjct: 1066 KAHVIKKKIEELYHLMSDQNLSLLPDYEK-RLAVLKDTEFIDQNHNVLLKGRVACEINSG 1124
Query: 101 DELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQIN--LRMELAKPLQQLQESARK 158
EL++TEL+ + + ++ AL S F+ K+ E+ + LAK Q+++E +K
Sbjct: 1125 YELVLTELILDNFLGSFEPEEIVALLSVFVYEGKTREEEPPIVTPRLAKGKQRIEEIYKK 1184
Query: 159 IAEIQNECKLEVNVDEYVESTVRPF-LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARR 217
+ + N ++ + DE + F +M+V+Y W++G +F E+++M+ EG+++R
Sbjct: 1185 MLCVFNTHQIPLTQDEAEFLDRKRFAMMNVVYEWARGLSFKEIMEMSPEAEGTVVRVITW 1244
Query: 218 LDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 260
LDE +++ A+ +G L K + A E ++R I+F+ SLYL
Sbjct: 1245 LDEICREVKTASIIIGNSTLHMKMSRAQELIKRDIVFAASLYL 1287
>FB|FBgn0039117 [details] [associations]
symbol:tst "twister" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IMP] [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
eggNOG:COG4581 InterPro:IPR025696 Pfam:PF13234 EMBL:AJ276896
ProteinModelPortal:Q9BI21 SMR:Q9BI21 STRING:Q9BI21 PaxDb:Q9BI21
PRIDE:Q9BI21 FlyBase:FBgn0039117 InParanoid:Q9BI21
OrthoDB:EOG46HDRK ArrayExpress:Q9BI21 Bgee:Q9BI21 Uniprot:Q9BI21
Length = 1197
Score = 250 (93.1 bits), Expect = 7.7e-21, Sum P(2) = 7.7e-21
Identities = 71/258 (27%), Positives = 140/258 (54%)
Query: 5 DPEVVDLVNQIEELEHKL--FAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQI 61
D EV ++N ++ L K+ F N + E + + ++R+ H I++L+ K +
Sbjct: 945 DSEVA-MLNYVDHLLRKVGEFLPHTNIAGFEQEFAKVYERRMLEIH-IEELRFKNSARNL 1002
Query: 62 QKFRDELKNRSRVLKKLGHINADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQ 121
+ D N+ +VL+ L +I+ V LKG+ AC + +ELL+TEL+ FNDL+ +
Sbjct: 1003 TLYPDYC-NKLKVLRALKYIDELDEVTLKGKVACEMGQ-NELLITELILCNMFNDLEPAE 1060
Query: 122 VAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVR 181
+AAL S + K ++ + L + + ++ I + E + + ++ ++ +
Sbjct: 1061 IAALLSGLVFQAKMQDKPVIPEALKECVAAFEQINDTI--LAEEQRFQAAIE--TDNRLN 1116
Query: 182 PFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKF 241
L++V+Y W++ FAE++++T + EG I+R ++L+E + ++ AA +G L+ K
Sbjct: 1117 FGLLEVVYEWARNKPFAEIMKLTTVQEGIIVRCIQQLNETVRDVKTAAIRIGNPGLQSKM 1176
Query: 242 AAASESLRRGIMFSNSLY 259
AS +++R I+F+ SLY
Sbjct: 1177 EEASAAIKRDIVFTASLY 1194
Score = 36 (17.7 bits), Expect = 7.7e-21, Sum P(2) = 7.7e-21
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 3 IEDPEVVDLVNQIEE 17
+ DP VDL+ +E+
Sbjct: 155 VADPSNVDLLENLEQ 169
>WB|WBGene00008502 [details] [associations]
symbol:skih-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG4581 EMBL:Z68341
HOGENOM:HOG000163048 KO:K12599 OMA:TRLDETC
GeneTree:ENSGT00690000102154 PIR:T20487 RefSeq:NP_502084.2
ProteinModelPortal:Q19103 SMR:Q19103 STRING:Q19103 PaxDb:Q19103
EnsemblMetazoa:F01G4.3 GeneID:178017 KEGG:cel:CELE_F01G4.3
UCSC:F01G4.3 CTD:178017 WormBase:F01G4.3 InParanoid:Q19103
NextBio:899374 Uniprot:Q19103
Length = 1266
Score = 236 (88.1 bits), Expect = 2.1e-18, P = 2.1e-18
Identities = 68/250 (27%), Positives = 124/250 (49%)
Query: 15 IEELEHKLF---AHPLNK-SQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKN 70
+E+LE+ L + P ++ + + + + +I+ L+ ++ S +E N
Sbjct: 1019 LEKLEYNLNLPQSFPARHCTRFDEHFSVLRDRIRIERKIESLEYEL-SSDALLLSEEYHN 1077
Query: 71 RSRVLKKLGHINADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFI 130
R +VL+ L + +V LKGR C I ELL+TEL+ + F+ ++AAL S
Sbjct: 1078 RLKVLEALNFVEQK-MVSLKGRIGCEIHH-QELLITELILDYKFHQRSPAELAALLSTLT 1135
Query: 131 PVDKSSEQINLRMELAKPLQQLQESARKI-AEIQNECKLEVNVDEYVESTVRPFLMDVIY 189
S ++ + ++ ES + + +++ + + +R LM+V+Y
Sbjct: 1136 CQYNSGREMQFGGDTV--FGEISESVKSVLTRLESVASKHKSQISDLGCEIRFDLMEVVY 1193
Query: 190 CWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLR 249
W+ G F ++++MTD EG I++ +RLDE +R A + VG+ L +K S S+R
Sbjct: 1194 EWANGTPFYQIMEMTDCQEGLIVKCIQRLDEVCKDVRNAGRIVGDPALVEKMEEVSASIR 1253
Query: 250 RGIMFSNSLY 259
R I+F+ SLY
Sbjct: 1254 RDIVFAASLY 1263
>UNIPROTKB|H7C4L3 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] InterPro:IPR012961 Pfam:PF08148
GO:GO:0005524 EMBL:AL645922 GO:GO:0016818 HGNC:HGNC:10898
ChiTaRS:SKIV2L ProteinModelPortal:H7C4L3 PRIDE:H7C4L3
Ensembl:ENST00000491994 Uniprot:H7C4L3
Length = 182
Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 48/158 (30%), Positives = 88/158 (55%)
Query: 40 QRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHINADGVVQLKGRAACLIDT 99
+ + ++ E+++L+ + D + E R VL+ LG+++ G V+L GR AC + +
Sbjct: 27 RERMQIQKEMERLRFLLSDQSLLLL-PEYHQRVEVLRTLGYVDEAGTVKLAGRVACAMSS 85
Query: 100 GDELLVTELMFNGTFNDLDHHQVAALAS---CFIPVDKSSEQINLRMELAKPLQQLQESA 156
ELL+TELMF+ + L ++AAL S C P D + N L + +++++ A
Sbjct: 86 -HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQLPNT---LKQGIERVRAVA 141
Query: 157 RKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKG 194
++I E+Q C L V+E+V + L++V+Y W++G
Sbjct: 142 KRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARG 178
>UNIPROTKB|H0YAC4 [details] [associations]
symbol:SKIV2L2 "Superkiller viralicidic activity 2-like 2"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] InterPro:IPR012961
Pfam:PF08148 GO:GO:0005524 GO:GO:0016818 HGNC:HGNC:18734
ChiTaRS:SKIV2L2 EMBL:AC010480 EMBL:AC020728 Ensembl:ENST00000508716
Uniprot:H0YAC4
Length = 72
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 36/59 (61%), Positives = 45/59 (76%)
Query: 184 LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFA 242
LMDV+Y W+ GATFA + +MTD+FEGSIIR RRL+E L Q+ AA+A+G LE KFA
Sbjct: 2 LMDVVYTWATGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFA 60
>UNIPROTKB|H9L343 [details] [associations]
symbol:H9L343 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0055087 "Ski complex" evidence=IEA]
InterPro:IPR025696 Pfam:PF13234 GeneTree:ENSGT00690000102154
EMBL:AADN02042840 Ensembl:ENSGALT00000036117 OMA:LLSCHEL
Uniprot:H9L343
Length = 131
Score = 99 (39.9 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 24/77 (31%), Positives = 41/77 (53%)
Query: 39 FQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHINADGVVQLKGRAACLID 98
F + + +++QL+ ++ D + E + R VL+ LG++ G VQL GR A L+
Sbjct: 57 FAARRRLQAQVEQLQYELSDRSLLLL-PEYRQRLGVLRALGYVADGGAVQLPGRVAALLS 115
Query: 99 TGDELLVTELMFNGTFN 115
ELL+TEL+ +
Sbjct: 116 C-HELLLTELLLGNVLS 131
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.133 0.369 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 260 260 0.00089 114 3 11 22 0.45 33
32 0.49 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 46
No. of states in DFA: 587 (62 KB)
Total size of DFA: 169 KB (2100 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 27.79u 0.15s 27.94t Elapsed: 00:00:02
Total cpu time: 27.79u 0.15s 27.94t Elapsed: 00:00:02
Start: Sat May 11 09:49:26 2013 End: Sat May 11 09:49:28 2013