BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024969
(260 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9CZU3|SK2L2_MOUSE Superkiller viralicidic activity 2-like 2 OS=Mus musculus GN=Skiv2l2
PE=2 SV=1
Length = 1040
Score = 235 bits (599), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 117/261 (44%), Positives = 174/261 (66%), Gaps = 2/261 (0%)
Query: 1 MKIEDPEVVDLVNQIEELEHKLFAHPL-NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDS 59
M I+D + ++ ++E EH++++HPL N E +RKA++ +I+ K +++ +
Sbjct: 781 MGIQDQGLKKVIQKVEAFEHRMYSHPLHNDPNLETVYTLCERKAQIALDIKSAKRELKKA 840
Query: 60 QIQKFRDELKNRSRVLKKLGHINADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDH 119
+ DELK R RVL++LG + V+++KGR AC I + DELL+TE+MFNG FNDL
Sbjct: 841 RTVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMFNGLFNDLSS 900
Query: 120 HQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVEST 179
Q AL SCF+ + SSE L +LA PL+Q+QE A++IA++ E KLE++ + Y+ S+
Sbjct: 901 EQATALLSCFVFQENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYL-SS 959
Query: 180 VRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEK 239
+P LMDV+Y W+ GATFA + +MTD+FEGSIIR RRL+E L Q+ AA+A+G LE
Sbjct: 960 FKPHLMDVVYTWATGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELEN 1019
Query: 240 KFAAASESLRRGIMFSNSLYL 260
KFA ++R I+F+ SLYL
Sbjct: 1020 KFAEGITKIKRDIVFAASLYL 1040
>sp|P42285|SK2L2_HUMAN Superkiller viralicidic activity 2-like 2 OS=Homo sapiens GN=SKIV2L2
PE=1 SV=3
Length = 1042
Score = 233 bits (594), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 116/261 (44%), Positives = 174/261 (66%), Gaps = 2/261 (0%)
Query: 1 MKIEDPEVVDLVNQIEELEHKLFAHPL-NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDS 59
M I+D + ++ ++E EH++++HPL N E ++KA++ +I+ K +++ +
Sbjct: 783 MGIQDQGLKKVIQKVEAFEHRMYSHPLHNDPNLETVYTLCEKKAQIAIDIKSAKRELKKA 842
Query: 60 QIQKFRDELKNRSRVLKKLGHINADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDH 119
+ DELK R RVL++LG + V+++KGR AC I + DELL+TE+MFNG FNDL
Sbjct: 843 RTVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMFNGLFNDLSA 902
Query: 120 HQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVEST 179
Q AL SCF+ + SSE L +LA PL+Q+QE A++IA++ E KLE++ + Y+ S+
Sbjct: 903 EQATALLSCFVFQENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYL-SS 961
Query: 180 VRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEK 239
+P LMDV+Y W+ GATFA + +MTD+FEGSIIR RRL+E L Q+ AA+A+G LE
Sbjct: 962 FKPHLMDVVYTWATGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELEN 1021
Query: 240 KFAAASESLRRGIMFSNSLYL 260
KFA ++R I+F+ SLYL
Sbjct: 1022 KFAEGITKIKRDIVFAASLYL 1042
>sp|O14232|MTR4_SCHPO ATP-dependent RNA helicase mtr4 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=mtr4 PE=1 SV=1
Length = 1117
Score = 213 bits (542), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 114/262 (43%), Positives = 173/262 (66%), Gaps = 3/262 (1%)
Query: 1 MKIEDPEVVDLVNQIEELEHKLFAHPL-NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDS 59
M I++P + L+ ++ LE +L ++PL N S+ E + + RK + E++ LK K+ +
Sbjct: 857 MNIKEPTFIKLMKKVNILESRLLSNPLHNFSELEEKYAEYLRKLALLEEVKDLKKKLSKA 916
Query: 60 QIQKFRDELKNRSRVLKKLGHINADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDH 119
+ DEL +R RVL++LG +D V+++KGR AC I +GD LL+TEL+FNG FNDL
Sbjct: 917 RSIMQLDELNSRKRVLRRLGFTTSDDVIEVKGRVACEISSGDGLLLTELIFNGMFNDLTP 976
Query: 120 HQVAALASCFIPVDKSS-EQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVES 178
Q AAL SC + +KS E ++ ELA PL+ LQE AR+IA++ E K E+N +EYV S
Sbjct: 977 EQCAALLSCLVFQEKSEVENQRMKEELAGPLKILQEMARRIAKVSKESKQELNEEEYVNS 1036
Query: 179 TVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLE 238
+P LM+V+Y W+ GA+FA++ +MTD++EGS+IR RRL+E + Q+ AA+ +G +L+
Sbjct: 1037 -FKPSLMEVVYAWAHGASFAQICKMTDVYEGSLIRMFRRLEELIRQMVDAAKVIGNTSLQ 1095
Query: 239 KKFAAASESLRRGIMFSNSLYL 260
+K + R I+FS SLYL
Sbjct: 1096 QKMEDTIACIHRDIVFSASLYL 1117
>sp|Q23223|MTR4_CAEEL mRNA transport homolog 4 OS=Caenorhabditis elegans GN=mtr-4 PE=3 SV=1
Length = 1026
Score = 201 bits (510), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 110/261 (42%), Positives = 167/261 (63%), Gaps = 3/261 (1%)
Query: 1 MKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRC-FQRKAEVNHEIQQLKSKMRDS 59
M+I+ E+ +L+ + + LE +L H + K + ++ F++K + E+ LK++ +
Sbjct: 768 MEIKTVEMKELIAREKSLEGRLETHSMTKRDNMKDLKKQFEQKQDAVKELNALKAERKSV 827
Query: 60 QIQKFRDELKNRSRVLKKLGHINADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDH 119
Q +EL NR RVL++LG++ D + LKG AC + DEL++TE++ G FN LD
Sbjct: 828 QSTLHLEELNNRKRVLRRLGYLGNDDALVLKGSVACELSASDELILTEMLLKGIFNTLDV 887
Query: 120 HQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVEST 179
Q AAL SCF+ DK + L EL L +L E AR +A++ NECK+EV D+YV S+
Sbjct: 888 AQTAALLSCFVFQDKCAAP-KLATELQTCLSELHEQARNVAKVSNECKMEVMEDKYV-SS 945
Query: 180 VRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEK 239
P LMDV+Y W GATF+E+++ TD+FEGSIIR+ RRL+E L ++ AA+A+ LE+
Sbjct: 946 FNPGLMDVVYQWVNGATFSEIVKTTDVFEGSIIRTLRRLEEVLREMINAAKALANKELEQ 1005
Query: 240 KFAAASESLRRGIMFSNSLYL 260
KF A ++L+R I+F+ SLYL
Sbjct: 1006 KFEDARKNLKRDIVFAASLYL 1026
>sp|P47047|MTR4_YEAST ATP-dependent RNA helicase DOB1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=MTR4 PE=1 SV=1
Length = 1073
Score = 186 bits (473), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 110/261 (42%), Positives = 172/261 (65%), Gaps = 2/261 (0%)
Query: 1 MKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRC-FQRKAEVNHEIQQLKSKMRDS 59
MKIED + + L+ +I+ L KL ++PL S ++ + RK +++ +++QLK K+ +S
Sbjct: 814 MKIEDEDFLKLMKKIDVLNTKLSSNPLTNSMRLEELYGKYSRKHDLHEDMKQLKRKISES 873
Query: 60 QIQKFRDELKNRSRVLKKLGHINADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDH 119
Q D+L+ R RVL++LG + +++LKGR AC I +GDELL+TEL+FNG FN+L
Sbjct: 874 QAVIQLDDLRRRKRVLRRLGFCTPNDIIELKGRVACEISSGDELLLTELIFNGNFNELKP 933
Query: 120 HQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVEST 179
Q AAL SCF ++ E L+ ELA+PL+ ++E A KIA+I + K+EV +YVES
Sbjct: 934 EQAAALLSCFAFQERCKEAPRLKPELAEPLKAMREIAAKIAKIMKDSKIEVVEKDYVES- 992
Query: 180 VRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEK 239
R LM+V+Y W +GATF ++ +MTD++EGS+IR +RL+E + +L A +G +L++
Sbjct: 993 FRHELMEVVYEWCRGATFTQICKMTDVYEGSLIRMFKRLEELVKELVDVANTIGNSSLKE 1052
Query: 240 KFAAASESLRRGIMFSNSLYL 260
K A + + R I+ + SLYL
Sbjct: 1053 KMEAVLKLIHRDIVSAGSLYL 1073
>sp|O13799|YE02_SCHPO Uncharacterized helicase C17H9.02 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC17H9.02 PE=1 SV=1
Length = 1030
Score = 166 bits (419), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/263 (37%), Positives = 156/263 (59%), Gaps = 5/263 (1%)
Query: 1 MKIEDPEVVDLVNQIEELEHKLFAHPLNK-SQDENQIRCFQRKAEVNHEIQQLKSKMRDS 59
M IE + + ++E LE KLF P K S+ + F++K + +I+ + +K+ ++
Sbjct: 770 MHIESSTLSLSLRKLEILEPKLFDSPYYKDSKHRAEYHEFRKKLNLRAQIKDISTKITNT 829
Query: 60 Q-IQKFRDELKNRSRVLKKLGHINADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLD 118
+ I + R ELK R RVL++LG + V+ +KGR AC I +GDELL+ EL+F G FN +
Sbjct: 830 EAIIQLR-ELKIRQRVLRRLGFCTLENVIDIKGRVACEITSGDELLLVELIFQGFFNQMP 888
Query: 119 HHQVAALASCFIPVDKSS-EQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVE 177
++AA SCF+ DKS +NL+ K + E+A++IA + E KL+ N +Y+
Sbjct: 889 PEEIAAALSCFVYEDKSEVSTLNLKEPFKKMYLTIIEAAKRIATVSLESKLQFNESDYLH 948
Query: 178 STVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNL 237
+P +M+ + W GA+F E+ ++ ++EGSI+R+ RRLDE L QL AA +G L
Sbjct: 949 Q-FKPDIMEPVSLWINGASFQEICIVSKLYEGSIVRTFRRLDELLKQLEHAAIVLGNNEL 1007
Query: 238 EKKFAAASESLRRGIMFSNSLYL 260
++K + L R I+FS SLYL
Sbjct: 1008 KEKSVLTEQKLHRDIIFSASLYL 1030
>sp|O59801|SKI2_SCHPO Putative ATP-dependent RNA helicase C550.03c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPCC550.03c PE=3 SV=1
Length = 1213
Score = 126 bits (317), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 138/261 (52%), Gaps = 3/261 (1%)
Query: 2 KIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKMRDSQ 60
K+ D E + + L++KL +P+ + + ++ E+ I L S + D
Sbjct: 954 KVRDFEFCEAFEKRNFLQNKLSGNPIISTPNFLTHFALAYQEYELESNIDNLSSYISDQN 1013
Query: 61 IQKFRDELKNRSRVLKKLGHINADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHH 120
++ D + R +VL++LG+I+A+ V LKGR AC I++ EL++TEL+ + D
Sbjct: 1014 LELLPD-YEQRIKVLQELGYIDAERTVLLKGRVACEINSTSELVLTELILENSLADFSCE 1072
Query: 121 QVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECK-LEVNVDEYVEST 179
+ AL S F+ +K+ + + L K + + A K+ +IQ + L N ES
Sbjct: 1073 ETIALLSAFVFDEKTEVEPTISPHLQKGKEMILSVAEKVNQIQEHYQVLYFNEGNDFESQ 1132
Query: 180 VRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEK 239
R LM+V Y W++G +F + +TD+ EGSI+R+ RLDE L + R AA+ VG+ ++
Sbjct: 1133 PRFGLMEVCYEWARGMSFNRITDLTDVLEGSIVRTIIRLDEVLRECRGAARVVGDSSMYT 1192
Query: 240 KFAAASESLRRGIMFSNSLYL 260
K +RR I+F SLY+
Sbjct: 1193 KMEECQNLIRRNIVFCPSLYM 1213
>sp|Q15477|SKIV2_HUMAN Helicase SKI2W OS=Homo sapiens GN=SKIV2L PE=1 SV=3
Length = 1246
Score = 117 bits (294), Expect = 7e-26, Method: Composition-based stats.
Identities = 87/272 (31%), Positives = 138/272 (50%), Gaps = 24/272 (8%)
Query: 6 PEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFR 65
P +D VN ++ + + L + E I+ Q Q LK + R QIQK
Sbjct: 979 PPTLDPVNDLQLKDMSVVEGGLRARKLEELIQGAQCVHSPRFPAQYLKLRER-MQIQKEM 1037
Query: 66 DELK---------------NRSRVLKKLGHINADGVVQLKGRAACLIDTGDELLVTELMF 110
+ L+ R VL+ LG+++ G V+L GR AC + + ELL+TELMF
Sbjct: 1038 ERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRVACAMSS-HELLLTELMF 1096
Query: 111 NGTFNDLDHHQVAALAS---CFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECK 167
+ + L ++AAL S C P D + N L + +++++ A++I E+Q C
Sbjct: 1097 DNALSTLRPEEIAALLSGLVCQSPGDAGDQLPN---TLKQGIERVRAVAKRIGEVQVACG 1153
Query: 168 LEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRA 227
L V+E+V + L++V+Y W++G F+E+ ++ EG ++R +RL E LR
Sbjct: 1154 LNQTVEEFV-GELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCIQRLAEMCRSLRG 1212
Query: 228 AAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 259
AA+ VGE L K A+ LRR I+F+ SLY
Sbjct: 1213 AARLVGEPVLGAKMETAATLLRRDIVFAASLY 1244
>sp|P35207|SKI2_YEAST Antiviral helicase SKI2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SKI2 PE=1 SV=2
Length = 1287
Score = 103 bits (257), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 121/219 (55%), Gaps = 4/219 (1%)
Query: 45 VNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHINADGVVQLKGRAACLIDTGDELL 104
+ +I++L M D + D K R VLK I+ + V LKGR AC I++G EL+
Sbjct: 1070 IKKKIEELYHLMSDQNLSLLPDYEK-RLAVLKDTEFIDQNHNVLLKGRVACEINSGYELV 1128
Query: 105 VTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQIN--LRMELAKPLQQLQESARKIAEI 162
+TEL+ + + ++ AL S F+ K+ E+ + LAK Q+++E +K+ +
Sbjct: 1129 LTELILDNFLGSFEPEEIVALLSVFVYEGKTREEEPPIVTPRLAKGKQRIEEIYKKMLCV 1188
Query: 163 QNECKLEVNVDEYVESTVRPF-LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEF 221
N ++ + DE + F +M+V+Y W++G +F E+++M+ EG+++R LDE
Sbjct: 1189 FNTHQIPLTQDEAEFLDRKRFAMMNVVYEWARGLSFKEIMEMSPEAEGTVVRVITWLDEI 1248
Query: 222 LNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 260
+++ A+ +G L K + A E ++R I+F+ SLYL
Sbjct: 1249 CREVKTASIIIGNSTLHMKMSRAQELIKRDIVFAASLYL 1287
>sp|Q9ZBD8|HELY_MYCLE Probable helicase HelY OS=Mycobacterium leprae (strain TN) GN=helY
PE=3 SV=1
Length = 920
Score = 37.4 bits (85), Expect = 0.11, Method: Composition-based stats.
Identities = 47/189 (24%), Positives = 79/189 (41%), Gaps = 33/189 (17%)
Query: 84 DGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFI-----------PV 132
D V GR I + +LLV E + G + L ++AA+ S + PV
Sbjct: 741 DPQVTDDGRLLARIYSESDLLVAECLRTGAWAGLRPAELAAVVSAVLYETRGDDGPGGPV 800
Query: 133 DKSSEQINLRMELAKPLQQLQESARKIAEIQ-NECKLEVNVDEYVESTVRPFLMDVIYCW 191
D + LR Q LQ ++R A ++ +E + + + + + VIYCW
Sbjct: 801 DAEAPTPRLR-------QALQHTSRLSATLRADEQRHRIALSREPDDG----FVGVIYCW 849
Query: 192 SKGATFAEVIQM-------TDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAA 244
++ A V+ + G +R R++ + L+QLR AA E +L A
Sbjct: 850 ARTGDLAAVLAAADASGNGAPLSAGDFVRWCRQVLDLLDQLRNAAP---EPDLRATAKRA 906
Query: 245 SESLRRGIM 253
+RRG++
Sbjct: 907 INDVRRGVV 915
>sp|Q9ASQ5|CRCK3_ARATH Calmodulin-binding receptor-like cytoplasmic kinase 3
OS=Arabidopsis thaliana GN=CRCK3 PE=2 SV=1
Length = 510
Score = 34.7 bits (78), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 8/63 (12%)
Query: 55 KMRDSQIQKFRDELKNRSRVLKKLGHINADGVVQLKGRAACLIDTGDE-LLVTELMFNGT 113
+ + + R E K+ +L K+GH N +V+L G +D GDE L++TE + NGT
Sbjct: 254 RAKKEHFENLRTEFKSEVDLLSKIGHRN---LVKLLG----YVDKGDERLIITEYVRNGT 306
Query: 114 FND 116
D
Sbjct: 307 LRD 309
>sp|Q9S972|SD16_ARATH Receptor-like serine/threonine-protein kinase SD1-6 OS=Arabidopsis
thaliana GN=SD16 PE=1 SV=2
Length = 847
Score = 34.7 bits (78), Expect = 0.68, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 12/92 (13%)
Query: 66 DELKNRSRVLKKLGHINADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAAL 125
DE N R++ KL HIN +V+L G C +D G+++L+ E + N + LD H
Sbjct: 562 DEFMNEVRLIAKLQHIN---LVRLLG---CCVDKGEKMLIYEYLENLS---LDSHLFDQT 612
Query: 126 ASCFIPVDKSSEQINLRMELAKPLQQLQESAR 157
S + K + IN +A+ L L + +R
Sbjct: 613 RSSNLNWQKRFDIIN---GIARGLLYLHQDSR 641
>sp|Q39086|SD17_ARATH Receptor-like serine/threonine-protein kinase SD1-7 OS=Arabidopsis
thaliana GN=SD17 PE=1 SV=1
Length = 843
Score = 34.3 bits (77), Expect = 0.90, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 12/92 (13%)
Query: 66 DELKNRSRVLKKLGHINADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAAL 125
DE N R++ KL HIN +V+L G C +D G+++L+ E + N + LD H
Sbjct: 558 DEFMNEVRLIAKLQHIN---LVRLLG---CCVDKGEKMLIYEYLENLS---LDSHLFDQT 608
Query: 126 ASCFIPVDKSSEQINLRMELAKPLQQLQESAR 157
S + K + IN +A+ L L + +R
Sbjct: 609 RSSNLNWQKRFDIIN---GIARGLLYLHQDSR 637
>sp|O81905|SD18_ARATH Receptor-like serine/threonine-protein kinase SD1-8 OS=Arabidopsis
thaliana GN=SD18 PE=1 SV=1
Length = 850
Score = 34.3 bits (77), Expect = 0.96, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 9/55 (16%)
Query: 66 DELKNRSRVLKKLGHINADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHH 120
DE KN +++ +L HIN +V+L AC +D G+++L+ E + N + LD H
Sbjct: 565 DEFKNEVKLIARLQHIN---LVRL---LACCVDAGEKMLIYEYLENLS---LDSH 610
>sp|Q8RY67|WAKLO_ARATH Wall-associated receptor kinase-like 14 OS=Arabidopsis thaliana
GN=WAKL14 PE=2 SV=2
Length = 708
Score = 33.1 bits (74), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 66 DELKNRSRVLKKLGHINADGVVQLKGRAACLIDTGDELLVTELMFNGTFND 116
D++ N ++L + H N +V+L G C I+ GD +LV E M NGT ++
Sbjct: 387 DQVMNEIKLLSSVSHPN---LVRLLG---CCIEQGDPVLVYEYMPNGTLSE 431
>sp|Q39191|WAK1_ARATH Wall-associated receptor kinase 1 OS=Arabidopsis thaliana GN=WAK1
PE=1 SV=2
Length = 735
Score = 32.0 bits (71), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 31/142 (21%)
Query: 53 KSKMRDS-QIQKFRDELKNRSRVLKKLGHINADGVVQLKGRAACLIDTGDELLVTELMFN 111
K+++ DS Q+++F +E+ VL ++ H N VV+L G C ++T LLV E + N
Sbjct: 438 KARLGDSSQVEQFINEV----LVLSQINHRN---VVKLLG---CCLETEVPLLVYEFITN 487
Query: 112 GTFNDLDHHQVAALASCFIPVDKS---SEQINLRMELAKPLQQLQESAR--------KIA 160
GT D H + +D S ++ + +E+A L L SA K A
Sbjct: 488 GTLFDHLHGSM---------IDSSLTWEHRLKIAIEVAGTLAYLHSSASIPIIHRDIKTA 538
Query: 161 EIQNECKLEVNVDEYVESTVRP 182
I + L V ++ S + P
Sbjct: 539 NILLDVNLTAKVADFGASRLIP 560
>sp|Q558Z2|SUN1_DICDI Sun domain-containing protein 1 OS=Dictyostelium discoideum GN=sun1
PE=1 SV=1
Length = 905
Score = 31.6 bits (70), Expect = 5.7, Method: Composition-based stats.
Identities = 40/193 (20%), Positives = 87/193 (45%), Gaps = 16/193 (8%)
Query: 48 EIQQLKSKMRDSQIQKFRDELKN----RSRVLKKLGHINADGVVQLKGRAACLIDTGDEL 103
E+ +LKS ++ IQ + + +S + +LG + ++ + + + L + +E
Sbjct: 442 ELTKLKSDSKEQLIQISTESMNQLGQLKSESINQLGQVKSESIDKFQSTLKSL--SKEEQ 499
Query: 104 LVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLR-----MELAKPLQQLQESARK 158
E FN FN L+ L+ + ++K E+IN ++L + +QL+E ++
Sbjct: 500 SKIEREFNHQFNQLNKDADQLLSQHSLKIEKLREEINENQQSSLLKLTQEYKQLEERLKE 559
Query: 159 IAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGAT--FAEVIQMTDIFEG--SIIRS 214
+ + ++D++ ES F+ D+ +K ++ + IQ+T F S I+
Sbjct: 560 FSSKLQQSISSSSMDQF-ESWKLVFIKDIEERINKESSKLTNQYIQLTQQFTKIQSFIKD 618
Query: 215 ARRLDEFLNQLRA 227
+D N + +
Sbjct: 619 NPSIDSLTNTIES 631
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.133 0.369
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,134,139
Number of Sequences: 539616
Number of extensions: 3175573
Number of successful extensions: 13092
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 75
Number of HSP's that attempted gapping in prelim test: 13032
Number of HSP's gapped (non-prelim): 119
length of query: 260
length of database: 191,569,459
effective HSP length: 115
effective length of query: 145
effective length of database: 129,513,619
effective search space: 18779474755
effective search space used: 18779474755
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)