BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>024972
MGKRKRGDANNPIDIVSSTPEDPGHLSKHRTCWLHTVAFLHARKMKISKQKIRNFELTAP
CFLGTFSCRRRSKRRVKCKNTSLIKGKNSSSVKCKDMITKRKKNKLDSGKFEHLLDNLWR
SFSEDKKAGFTYLDSLWFDLYRKPSSKAKVLTWIKRKHIFSKKYVLVPIVCWFVMDIYKA
EDRPETKELISRIPLLVPKVPQQRNGEECGNFVLYFINLFVEGAPENFNLEDYPYFMEKN
WFTAEDLDCFCERLNSSEN

High Scoring Gene Products

Symbol, full name Information P value
AT3G48480 protein from Arabidopsis thaliana 7.6e-25
ULP1D
UB-like protease 1D
protein from Arabidopsis thaliana 1.4e-05
OTS2
OVERLY TOLERANT TO SALT 2
protein from Arabidopsis thaliana 0.00013
DDB_G0289557
peptidase C48 family protein
gene from Dictyostelium discoideum 0.00052

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  024972
        (259 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2101130 - symbol:AT3G48480 species:3702 "Arabi...   283  7.6e-25   1
TAIR|locus:2195598 - symbol:ULP1D "UB-like protease 1D" s...   126  1.4e-05   2
TAIR|locus:2194574 - symbol:OTS2 "OVERLY TOLERANT TO SALT...   116  0.00013   2
DICTYBASE|DDB_G0289557 - symbol:DDB_G0289557 "peptidase C...   111  0.00052   2


>TAIR|locus:2101130 [details] [associations]
            symbol:AT3G48480 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0006508 "proteolysis"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] InterPro:IPR003653 Pfam:PF02902 PROSITE:PS50600
            EMBL:CP002686 GO:GO:0008234 GO:GO:0006508 IPI:IPI00944269
            RefSeq:NP_190417.4 UniGene:At.53833 ProteinModelPortal:F4JF18
            SMR:F4JF18 EnsemblPlants:AT3G48480.1 GeneID:824007
            KEGG:ath:AT3G48480 OMA:VFVPIVC Uniprot:F4JF18
        Length = 298

 Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
 Identities = 50/91 (54%), Positives = 68/91 (74%)

Query:   166 LVPIVCWFVMDIYKAEDRPETKELISRIPLLVPKVPQQRNGEECGNFVLYFINLFVEGAP 225
             L P +  FV+DIY+AE R E   L+  IP  VP VPQQ N  ECG+FVLY+I+ F+E AP
Sbjct:   203 LEPDIRKFVLDIYRAEGRTEDSSLVDEIPFYVPMVPQQTNDVECGSFVLYYIHRFIEDAP 262

Query:   226 ENFNLEDYPYFMEKNWFTAEDLDCFCERLNS 256
             ENFN+ED PYF++++WF+ +DL+ FC+ L+S
Sbjct:   263 ENFNVEDMPYFLKEDWFSHKDLEKFCDELHS 293

 Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
 Identities = 78/245 (31%), Positives = 117/245 (47%)

Query:    13 IDIVSSTPEDPGHLSKHRTCWLHTVAFLHARKMKISKQK-IRNFELTAPCFLGTFXXXXX 71
             + I+    ED  +L  HRTCW H  A L     K  + K +  F+LTAPCF         
Sbjct:    23 VTIIDDCEEDE-YLH-HRTCWKHIAAALSKCGSKPKRTKELEIFKLTAPCFYDECTR--- 77

Query:    72 XXXXXXXXNTSLIKGKNSSSVKCKDMITKRKKNKLDSGKFEHLLDNLWRSFSEDKKAGFT 131
                          +G++   +KCK + +K +K KL+S  F   L+++WR FS++KK  F 
Sbjct:    78 -------------RGRSERRIKCKYLDSKLRK-KLNSKAFVGYLEDVWRGFSDEKKNSFV 123

Query:   132 YLDSLWFDLYRKPSS--KAKVLTWIKRKHIFSKKYVLVPIVCW--FVMDIYK--AEDRPE 185
             YLD LWF +Y+  +   ++ V   +K K IFSKKYV +PIV W  + + I+    ED   
Sbjct:   124 YLDCLWFSMYKSENHNIRSSVFDSVKTKQIFSKKYVFLPIVYWSHWTLLIFCNFGEDLDS 183

Query:   186 TKELISRIPLLVPKVPQQRNGEECGNFVLYFINLFVEGAPENFNLED-YPYFMEKNWFTA 244
              K  +  +  L      QR   +   FVL       EG  E+ +L D  P+++       
Sbjct:   184 DKTCMLFLDSLQTTDSSQRLEPDIRKFVLDIYR--AEGRTEDSSLVDEIPFYVPMVPQQT 241

Query:   245 EDLDC 249
              D++C
Sbjct:   242 NDVEC 246


>TAIR|locus:2195598 [details] [associations]
            symbol:ULP1D "UB-like protease 1D" species:3702
            "Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
            [GO:0006508 "proteolysis" evidence=IEA;ISS] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA;ISS] [GO:0016926
            "protein desumoylation" evidence=RCA;IDA] [GO:0016929
            "SUMO-specific protease activity" evidence=IDA] [GO:0009651
            "response to salt stress" evidence=IGI] [GO:0010228 "vegetative to
            reproductive phase transition of meristem" evidence=IGI;RCA]
            [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090 "trichome
            morphogenesis" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
            process" evidence=RCA] [GO:0045010 "actin nucleation" evidence=RCA]
            [GO:0045492 "xylan biosynthetic process" evidence=RCA] [GO:0048765
            "root hair cell differentiation" evidence=RCA] [GO:0050665
            "hydrogen peroxide biosynthetic process" evidence=RCA] [GO:0071555
            "cell wall organization" evidence=RCA] InterPro:IPR003653
            Pfam:PF02902 PROSITE:PS50600 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0016607 GO:GO:0009651
            GO:GO:0006508 GO:GO:0010228 eggNOG:COG5160 GO:GO:0016929
            GO:GO:0016926 EMBL:AC004473 HOGENOM:HOG000128552 KO:K16287
            ProtClustDB:CLSN2690394 EMBL:DQ304543 IPI:IPI00546774 PIR:T02274
            RefSeq:NP_176228.3 UniGene:At.43275 UniGene:At.64986
            ProteinModelPortal:Q2PS26 SMR:Q2PS26 STRING:Q2PS26 MEROPS:C48.A04
            EnsemblPlants:AT1G60220.1 GeneID:842317 KEGG:ath:AT1G60220
            TAIR:At1g60220 InParanoid:Q2PS26 OMA:HETPREW PhylomeDB:Q2PS26
            Genevestigator:Q2PS26 Uniprot:Q2PS26
        Length = 584

 Score = 126 (49.4 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
 Identities = 26/60 (43%), Positives = 36/60 (60%)

Query:   187 KELISRIPLLVPKVPQQRNGEECGNFVLYFINLFVEGAPENFNLEDYPYFMEKNWFTAED 246
             K L  RI   V +VPQQ+N  +CG FVL+FI  F+E AP+    +D   F +K WF  ++
Sbjct:   503 KNLPRRISEAVVQVPQQKNDFDCGPFVLFFIKRFIEEAPQRLKRKDLGMF-DKKWFRPDE 561

 Score = 42 (19.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
 Identities = 7/17 (41%), Positives = 10/17 (58%)

Query:   153 WIKRKHIFSKKYVLVPI 169
             W K   +F K Y+ +PI
Sbjct:   417 WWKGIDLFRKAYIFIPI 433


>TAIR|locus:2194574 [details] [associations]
            symbol:OTS2 "OVERLY TOLERANT TO SALT 2" species:3702
            "Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
            [GO:0006508 "proteolysis" evidence=IEA;ISS] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA;ISS] [GO:0016926
            "protein desumoylation" evidence=RCA;IDA] [GO:0016929
            "SUMO-specific protease activity" evidence=IDA] [GO:0009651
            "response to salt stress" evidence=IGI] [GO:0010228 "vegetative to
            reproductive phase transition of meristem" evidence=IGI;RCA]
            [GO:0009793 "embryo development ending in seed dormancy"
            evidence=RCA] [GO:0010413 "glucuronoxylan metabolic process"
            evidence=RCA] [GO:0045492 "xylan biosynthetic process"
            evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
            evidence=RCA] InterPro:IPR003653 Pfam:PF02902 PROSITE:PS50600
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0005654
            GO:GO:0009651 GO:GO:0006508 GO:GO:0010228 EMBL:AC007067
            eggNOG:COG5160 GO:GO:0016929 GO:GO:0016926 EMBL:AY092981
            EMBL:AY128798 IPI:IPI00529693 IPI:IPI00534077 RefSeq:NP_172527.2
            RefSeq:NP_973802.1 UniGene:At.42174 ProteinModelPortal:Q8RWN0
            SMR:Q8RWN0 STRING:Q8RWN0 MEROPS:C48.A05 PaxDb:Q8RWN0 PRIDE:Q8RWN0
            EnsemblPlants:AT1G10570.1 GeneID:837598 KEGG:ath:AT1G10570
            TAIR:At1g10570 HOGENOM:HOG000128552 InParanoid:Q8RWN0 KO:K16287
            OMA:PDKEDES PhylomeDB:Q8RWN0 ProtClustDB:CLSN2690394
            Genevestigator:Q8RWN0 Uniprot:Q8RWN0
        Length = 571

 Score = 116 (45.9 bits), Expect = 0.00013, Sum P(2) = 0.00013
 Identities = 21/48 (43%), Positives = 31/48 (64%)

Query:   199 KVPQQRNGEECGNFVLYFINLFVEGAPENFNLEDYPYFMEKNWFTAED 246
             +VPQQ+N  +CG F+L+FI  F+E AP+   L+D    + K WF  E+
Sbjct:   502 QVPQQKNDFDCGLFLLFFIRRFIEEAPQRLTLQDLK-MIHKKWFKPEE 548

 Score = 44 (20.5 bits), Expect = 0.00013, Sum P(2) = 0.00013
 Identities = 8/21 (38%), Positives = 11/21 (52%)

Query:   149 KVLTWIKRKHIFSKKYVLVPI 169
             K   W K   +F K Y+ +PI
Sbjct:   401 KFRRWWKGFDLFCKSYIFIPI 421


>DICTYBASE|DDB_G0289557 [details] [associations]
            symbol:DDB_G0289557 "peptidase C48 family protein"
            species:44689 "Dictyostelium discoideum" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0006508 "proteolysis"
            evidence=IEA] InterPro:IPR003653 Pfam:PF02902 PROSITE:PS50600
            dictyBase:DDB_G0289557 GO:GO:0008234 GO:GO:0006508
            EMBL:AAFI02000143 eggNOG:COG5160 KO:K08596 RefSeq:XP_636167.1
            ProteinModelPortal:Q54HC5 EnsemblProtists:DDB0219453 GeneID:8627200
            KEGG:ddi:DDB_G0289557 InParanoid:Q54HC5 Uniprot:Q54HC5
        Length = 778

 Score = 111 (44.1 bits), Expect = 0.00052, Sum P(2) = 0.00052
 Identities = 25/66 (37%), Positives = 39/66 (59%)

Query:   184 PETKELISRIPLLVPKVPQQRNGEECGNFVLYFINLFVEGAPENFNLEDYPY-FMEK-NW 241
             PE K   S +PL+   VP+Q N  +CG F+L++I LF     ++F   ++P  F+ + NW
Sbjct:   472 PERKFTSSNLPLVRANVPKQDNLFDCGVFLLHYIELFCRNPEKDF---EFPVSFLNRPNW 528

Query:   242 FTAEDL 247
             F  ED+
Sbjct:   529 FKIEDI 534

 Score = 47 (21.6 bits), Expect = 0.00052, Sum P(2) = 0.00052
 Identities = 12/50 (24%), Positives = 24/50 (48%)

Query:   124 EDKKAGFTYLDSLWFDLYRKPSSKAKVLT----WIKRKHIFSKKYVLVPI 169
             EDK   F + ++ ++++    ++     T    W K   IFS  ++ +PI
Sbjct:   356 EDKNR-FYFFNTFFYNILTLQNNIVNAFTRISKWTKNVDIFSYDFLFIPI 404


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.137   0.432    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      259       246    0.0010  113 3  11 22  0.42    33
                                                     32  0.46    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  614 (65 KB)
  Total size of DFA:  217 KB (2120 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  20.83u 0.10s 20.93t   Elapsed:  00:00:01
  Total cpu time:  20.83u 0.10s 20.93t   Elapsed:  00:00:01
  Start:  Sat May 11 09:56:16 2013   End:  Sat May 11 09:56:17 2013

Back to top