BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024972
(259 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q2PS26|ULP1D_ARATH Ubiquitin-like-specific protease 1D OS=Arabidopsis thaliana
GN=ULP1D PE=1 SV=1
Length = 584
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 187 KELISRIPLLVPKVPQQRNGEECGNFVLYFINLFVEGAPENFNLEDYPYFMEKNWFTAED 246
K L RI V +VPQQ+N +CG FVL+FI F+E AP+ +D F +K WF ++
Sbjct: 503 KNLPRRISEAVVQVPQQKNDFDCGPFVLFFIKRFIEEAPQRLKRKDLGMF-DKKWFRPDE 561
Query: 247 LDCF 250
Sbjct: 562 ASAL 565
>sp|Q0WKV8|ULP2A_ARATH Probable ubiquitin-like-specific protease 2A OS=Arabidopsis
thaliana GN=ULP2A PE=2 SV=2
Length = 774
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 58/151 (38%), Gaps = 53/151 (35%)
Query: 149 KVLTWIKRKHIFSKKYVLVPIVCWF----VMDIYKAEDRPETKELISRIPLLVP------ 198
+V W K +F K Y+ +PI C F V+ + E P E R+P ++
Sbjct: 375 RVQKWTKNVDLFEKDYIFIPINCSFHWSLVIICHPGELVPSHVENPQRVPCILHLDSIKG 434
Query: 199 ----------------------------------------KVPQQRNGEECGNFVLYFIN 218
++PQQ N +CG F+L++++
Sbjct: 435 SHKGGLINIFPSYLREEWKARHENTTNDSSRAPNMQSISLELPQQENSFDCGLFLLHYLD 494
Query: 219 LFVEGAPENFN---LEDYPYFMEKNWFTAED 246
LFV AP FN + F+ +NWF A++
Sbjct: 495 LFVAQAPAKFNPSLISRSANFLTRNWFPAKE 525
>sp|Q8RWN0|ULP1C_ARATH Ubiquitin-like-specific protease 1C OS=Arabidopsis thaliana
GN=ULP1C PE=1 SV=1
Length = 571
Score = 47.8 bits (112), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 199 KVPQQRNGEECGNFVLYFINLFVEGAPENFNLEDYPYFMEKNWFTAED 246
+VPQQ+N +CG F+L+FI F+E AP+ L+D + K WF E+
Sbjct: 502 QVPQQKNDFDCGLFLLFFIRRFIEEAPQRLTLQDLK-MIHKKWFKPEE 548
>sp|O65278|ULP1B_ARATH Putative ubiquitin-like-specific protease 1B OS=Arabidopsis
thaliana GN=ULP1B PE=5 SV=2
Length = 341
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 197 VPKVPQQRNGEECGNFVLYFINLFVEGAPENFNLEDYPYF 236
V + PQQ+NG +CG F+L +I+ + G F+ +D PYF
Sbjct: 288 VEERPQQQNGYDCGMFMLKYIDFYSRGLSLQFSQKDMPYF 327
>sp|Q94F30|ESD4_ARATH Ubiquitin-like-specific protease ESD4 OS=Arabidopsis thaliana
GN=ESD4 PE=1 SV=1
Length = 489
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 196 LVPKVPQQRNGEECGNFVLYFINLFVEGAPENFNLEDYPYF 236
V +PQQ+NG +CG F+L +I+ F G F+ E PYF
Sbjct: 435 FVEDLPQQKNGYDCGMFMLKYIDFFSRGLGLCFSQEHMPYF 475
>sp|Q8L7S0|ULP2B_ARATH Probable ubiquitin-like-specific protease 2B OS=Arabidopsis
thaliana GN=ULP2B PE=2 SV=3
Length = 931
Score = 40.0 bits (92), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 62/167 (37%), Gaps = 63/167 (37%)
Query: 139 DLYRKPSSKA-------KVLTWIKRKHIFSKKYVLVPI---------------------- 169
DL + PSS A +V W ++ +F K Y+ VP+
Sbjct: 447 DLDKDPSSIADGKAAFLRVRKWTRKVDMFGKDYIFVPVNYNLHWSLIVICHPGEVANRTD 506
Query: 170 ---------VCWFVMDIYKA------------------EDRPETKELIS----RIPLLVP 198
C MD K E ET + IS + +
Sbjct: 507 LDLDDSKKVPCILHMDSIKGSHAGLKNLVQTYLCEEWKERHKETSDDISSRFMNLRFVSL 566
Query: 199 KVPQQRNGEECGNFVLYFINLFVEGAPENFN---LEDYPYFMEKNWF 242
++PQQ N +CG F+L+++ LF+ AP NF+ + + F+ NWF
Sbjct: 567 ELPQQENSFDCGLFLLHYLELFLAEAPLNFSPFKIYNASNFLYLNWF 613
>sp|Q8GYL3|ULP1A_ARATH Ubiquitin-like-specific protease 1A OS=Arabidopsis thaliana
GN=ULP1A PE=2 SV=2
Length = 502
Score = 39.3 bits (90), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 165 VLVPIVCWFVMDIYKAEDRPETKELISR-IPLLVPKVPQQRNGEECGNFVLYFINLFVEG 223
+L + +FV ++ D+ E +SR V +P QRNG +CG F++ +I+ + G
Sbjct: 419 ILDALARYFVDEV---RDKSEVDLDVSRWRQEFVQDLPMQRNGFDCGMFMVKYIDFYSRG 475
Query: 224 APENFNLEDYPYF 236
F E PYF
Sbjct: 476 LDLCFTQEQMPYF 488
>sp|Q8BUH8|SENP7_MOUSE Sentrin-specific protease 7 OS=Mus musculus GN=Senp7 PE=2 SV=1
Length = 1037
Score = 38.1 bits (87), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Query: 196 LVPKVPQQRNGEECGNFVLYFINLFVEGAPENFNLEDYPYFMEKNWF 242
L PKVP+Q N +CG ++L ++ F + NF L P +EK WF
Sbjct: 966 LCPKVPKQDNSSDCGVYLLQYVESFFQDPIVNFEL---PIHLEK-WF 1008
>sp|D3ZF42|SENP7_RAT Sentrin-specific protease 7 OS=Rattus norvegicus GN=Senp7 PE=2 SV=1
Length = 1037
Score = 38.1 bits (87), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Query: 196 LVPKVPQQRNGEECGNFVLYFINLFVEGAPENFNLEDYPYFMEKNWF 242
L PKVP+Q N +CG ++L ++ F + NF L P +EK WF
Sbjct: 966 LCPKVPKQDNSSDCGVYLLQYVESFFQDPIVNFEL---PIHLEK-WF 1008
>sp|P59110|SENP1_MOUSE Sentrin-specific protease 1 OS=Mus musculus GN=Senp1 PE=2 SV=1
Length = 640
Score = 38.1 bits (87), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 199 KVPQQRNGEECGNFVLYFINLFVEGAPENFNLEDYPYFMEK 239
++PQQ NG +CG F + + + P NF + PYF ++
Sbjct: 589 EIPQQMNGSDCGMFACKYADCITKDRPINFTQQHMPYFRKR 629
>sp|Q9P0U3|SENP1_HUMAN Sentrin-specific protease 1 OS=Homo sapiens GN=SENP1 PE=1 SV=2
Length = 644
Score = 37.7 bits (86), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 199 KVPQQRNGEECGNFVLYFINLFVEGAPENFNLEDYPYF 236
++PQQ NG +CG F + + + P NF + PYF
Sbjct: 593 EIPQQMNGSDCGMFACKYADCITKDRPINFTQQHMPYF 630
>sp|Q5RBB1|SENP1_PONAB Sentrin-specific protease 1 OS=Pongo abelii GN=SENP1 PE=2 SV=1
Length = 645
Score = 37.7 bits (86), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 199 KVPQQRNGEECGNFVLYFINLFVEGAPENFNLEDYPYF 236
++PQQ NG +CG F + + + P NF + PYF
Sbjct: 594 EIPQQMNGSDCGMFACKYADCITKDRPINFTQQHMPYF 631
>sp|Q9BQF6|SENP7_HUMAN Sentrin-specific protease 7 OS=Homo sapiens GN=SENP7 PE=1 SV=4
Length = 1050
Score = 37.7 bits (86), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Query: 196 LVPKVPQQRNGEECGNFVLYFINLFVEGAPENFNLEDYPYFMEKNWF 242
L PKVP+Q N +CG ++L ++ F + NF L P +EK WF
Sbjct: 979 LCPKVPKQDNSSDCGVYLLQYVESFFKDPIVNFEL---PIHLEK-WF 1021
>sp|A7MBJ2|SENP7_BOVIN Sentrin-specific protease 7 OS=Bos taurus GN=SENP7 PE=2 SV=1
Length = 1047
Score = 37.7 bits (86), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Query: 196 LVPKVPQQRNGEECGNFVLYFINLFVEGAPENFNLEDYPYFMEKNWF 242
L PKVP+Q N +CG ++L ++ F + NF L P +EK WF
Sbjct: 976 LCPKVPKQDNSSDCGVYLLQYVESFFKDPIVNFEL---PIHLEK-WF 1018
>sp|Q6P7W0|SENP6_MOUSE Sentrin-specific protease 6 OS=Mus musculus GN=Senp6 PE=1 SV=3
Length = 1132
Score = 37.4 bits (85), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Query: 198 PKVPQQRNGEECGNFVLYFINLFVEGAPENFNLEDYPYFMEKNWF 242
PKVPQQ N +CG +VL ++ F E NF L P + NWF
Sbjct: 1038 PKVPQQNNFSDCGVYVLQYVESFFENPVLNFEL---PMNL-MNWF 1078
>sp|Q9EQE1|SENP2_RAT Sentrin-specific protease 2 OS=Rattus norvegicus GN=Senp2 PE=1 SV=1
Length = 588
Score = 37.4 bits (85), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 56/151 (37%), Gaps = 37/151 (24%)
Query: 126 KKAGFTYLDSLWFDLYRKPSSKA--KVLTWIKRKHIFSKKYVLVPI---VCW--FVMDIY 178
KK G+ L +L Y K S V W K ++F ++ VLVPI V W VMD+
Sbjct: 427 KKQGYPALHALSTFFYPKLKSGGYQAVKRWTKGVNLFDQELVLVPIHRKVHWSLVVMDLR 486
Query: 179 KA-----------------------EDRPETKELI-------SRIPLLVPKVPQQRNGEE 208
K +D +TK + + ++PQQ NG +
Sbjct: 487 KKCLKYLDSMGQKGHRICEILLQYLQDESKTKRNTDLNLLEWTHYSMKPHEIPQQLNGSD 546
Query: 209 CGNFVLYFINLFVEGAPENFNLEDYPYFMEK 239
CG F + + P F P F +K
Sbjct: 547 CGMFTCKYADYISRDKPITFTQHQMPLFRKK 577
>sp|Q91ZX6|SENP2_MOUSE Sentrin-specific protease 2 OS=Mus musculus GN=Senp2 PE=1 SV=2
Length = 588
Score = 35.8 bits (81), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 55/151 (36%), Gaps = 37/151 (24%)
Query: 126 KKAGFTYLDSLWFDLYRKPSSKA--KVLTWIKRKHIFSKKYVLVPI---VCW--FVMDIY 178
KK G+ L + Y K S V W K ++F ++ VLVPI V W VMD+
Sbjct: 427 KKQGYPALHAFSTFFYPKLKSGGYQAVKRWTKGVNLFEQELVLVPIHRKVHWSLVVMDLR 486
Query: 179 KA-----------------------EDRPETKELI-------SRIPLLVPKVPQQRNGEE 208
K +D +TK + + ++PQQ NG +
Sbjct: 487 KKCLKYLDSMGQKGHRICEILLQYLQDESKTKRNTDLNLLEWTHYSMKPHEIPQQLNGSD 546
Query: 209 CGNFVLYFINLFVEGAPENFNLEDYPYFMEK 239
CG F + + P F P F +K
Sbjct: 547 CGMFTCKYADYISRDKPITFTQHQMPLFRKK 577
>sp|O13769|ULP2_SCHPO Ubiquitin-like-specific protease 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ulp2 PE=1 SV=2
Length = 638
Score = 35.4 bits (80), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Query: 199 KVPQQRNGEECGNFVLYFINLFVEGAPE 226
KVPQQ N +CG + L+F+ LF+E PE
Sbjct: 534 KVPQQSNFSDCGIYALHFVELFLE-TPE 560
>sp|Q9GZR1|SENP6_HUMAN Sentrin-specific protease 6 OS=Homo sapiens GN=SENP6 PE=1 SV=2
Length = 1112
Score = 35.4 bits (80), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Query: 198 PKVPQQRNGEECGNFVLYFINLFVEGAPENFNLEDYPYFMEKNWF 242
PKVPQQ N +CG +VL ++ F E +F L P + NWF
Sbjct: 1019 PKVPQQNNFSDCGVYVLQYVESFFENPILSFEL---PMNL-ANWF 1059
>sp|Q5R7K7|SENP2_PONAB Sentrin-specific protease 2 OS=Pongo abelii GN=SENP2 PE=2 SV=1
Length = 589
Score = 35.4 bits (80), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 57/152 (37%), Gaps = 37/152 (24%)
Query: 125 DKKAGFTYLD--SLWFDLYRKPSSKAKVLTWIKRKHIFSKKYVLVPI---VCW--FVMDI 177
+KK G+ L S +F K V W K ++F ++ +LVPI V W V+D+
Sbjct: 427 NKKQGYPALHVFSTFFYPKLKSGGYQAVKRWTKGVNLFEQEIILVPIHRKVHWSLVVIDL 486
Query: 178 YKA-----------------------EDRPETKELI-------SRIPLLVPKVPQQRNGE 207
K +D +TK I + + ++PQQ NG
Sbjct: 487 RKKCLKYLDSMGQKGHRICEILLQYLQDESKTKRNIDLNLLEWTHYSMKPHEIPQQLNGS 546
Query: 208 ECGNFVLYFINLFVEGAPENFNLEDYPYFMEK 239
+CG F + + P F P F +K
Sbjct: 547 DCGMFTCKYADYISRDKPITFTQHQMPLFRKK 578
>sp|Q6NXL6|SENP5_MOUSE Sentrin-specific protease 5 OS=Mus musculus GN=Senp5 PE=2 SV=1
Length = 749
Score = 34.3 bits (77), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 200 VPQQRNGEECGNFVLYFINLFVEGAPENFNLEDYP 234
+PQQ+N +CG FVL + P F+ ED P
Sbjct: 698 IPQQKNDSDCGVFVLQYCKCLALEQPFQFSQEDMP 732
>sp|Q96HI0|SENP5_HUMAN Sentrin-specific protease 5 OS=Homo sapiens GN=SENP5 PE=1 SV=3
Length = 755
Score = 34.3 bits (77), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 200 VPQQRNGEECGNFVLYFINLFVEGAPENFNLEDYP 234
+PQQ+N +CG FVL + P F+ ED P
Sbjct: 704 IPQQKNDSDCGVFVLQYCKCLALEQPFQFSQEDMP 738
>sp|Q8WP32|SENP5_MACFA Sentrin-specific protease 5 OS=Macaca fascicularis GN=SENP5 PE=2
SV=1
Length = 755
Score = 34.3 bits (77), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 200 VPQQRNGEECGNFVLYFINLFVEGAPENFNLEDYP 234
+PQQ+N +CG FVL + P F+ ED P
Sbjct: 704 IPQQKNDSDCGVFVLQYCKCLALEQPFQFSQEDMP 738
>sp|Q9HC62|SENP2_HUMAN Sentrin-specific protease 2 OS=Homo sapiens GN=SENP2 PE=1 SV=3
Length = 589
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 58/153 (37%), Gaps = 39/153 (25%)
Query: 125 DKKAGFTYLD--SLWFDLYRKPSSKAKVLTWIKRKHIFSKKYVLVPI---VCW--FVMDI 177
+KK G+ L S +F K V W K ++F ++ +LVPI V W V+D+
Sbjct: 427 NKKQGYPALHVFSTFFYPKLKSGGYQAVKRWTKGVNLFEQEIILVPIHRKVHWSLVVIDL 486
Query: 178 YKA-----------------------EDRPETKELISRIPLL--------VPKVPQQRNG 206
K +D +TK S + LL ++PQQ NG
Sbjct: 487 RKKCLKYLDSMGQKGHRICEILLQYLQDESKTKR-NSDLNLLEWTHHSMKPHEIPQQLNG 545
Query: 207 EECGNFVLYFINLFVEGAPENFNLEDYPYFMEK 239
+CG F + + P F P F +K
Sbjct: 546 SDCGMFTCKYADYISRDKPITFTQHQMPLFRKK 578
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,784,538
Number of Sequences: 539616
Number of extensions: 4349401
Number of successful extensions: 8573
Number of sequences better than 100.0: 37
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 8526
Number of HSP's gapped (non-prelim): 59
length of query: 259
length of database: 191,569,459
effective HSP length: 115
effective length of query: 144
effective length of database: 129,513,619
effective search space: 18649961136
effective search space used: 18649961136
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)