Query 024973
Match_columns 259
No_of_seqs 270 out of 1713
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 17:43:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024973.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024973hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1hdj_A Human HSP40, HDJ-1; mol 99.8 2.5E-21 8.5E-26 142.6 7.1 70 114-185 2-71 (77)
2 2ej7_A HCG3 gene; HCG3 protein 99.8 2.5E-21 8.6E-26 144.1 7.0 71 113-183 7-77 (82)
3 2lgw_A DNAJ homolog subfamily 99.8 4.9E-21 1.7E-25 148.2 7.3 73 115-187 2-74 (99)
4 2ctr_A DNAJ homolog subfamily 99.8 6.9E-21 2.4E-25 143.9 7.8 72 113-186 5-76 (88)
5 2dn9_A DNAJ homolog subfamily 99.8 4.8E-21 1.6E-25 141.7 6.8 70 113-183 5-74 (79)
6 2ctp_A DNAJ homolog subfamily 99.8 4.5E-21 1.6E-25 141.5 6.5 69 113-183 5-73 (78)
7 2cug_A Mkiaa0962 protein; DNAJ 99.8 9.2E-21 3.1E-25 143.2 7.3 70 112-183 14-83 (88)
8 2yua_A Williams-beuren syndrom 99.8 6.6E-21 2.3E-25 147.1 6.7 72 113-185 15-86 (99)
9 2ctq_A DNAJ homolog subfamily 99.8 1E-20 3.5E-25 149.2 7.4 73 113-186 18-90 (112)
10 2dmx_A DNAJ homolog subfamily 99.8 7.9E-21 2.7E-25 144.6 6.4 72 113-184 7-78 (92)
11 2och_A Hypothetical protein DN 99.8 9.2E-21 3.2E-25 138.3 6.2 66 114-183 7-72 (73)
12 2ctw_A DNAJ homolog subfamily 99.8 1.7E-20 5.7E-25 147.4 7.7 76 111-187 13-88 (109)
13 1wjz_A 1700030A21RIK protein; 99.8 8.7E-21 3E-25 144.6 5.1 71 113-183 14-89 (94)
14 2l6l_A DNAJ homolog subfamily 99.8 6.3E-22 2.1E-26 164.2 -2.8 133 113-254 8-146 (155)
15 2o37_A Protein SIS1; HSP40, J- 99.8 3.2E-20 1.1E-24 141.5 6.6 71 114-188 7-77 (92)
16 1bq0_A DNAJ, HSP40; chaperone, 99.8 1.4E-20 4.9E-25 146.1 2.6 72 114-186 2-73 (103)
17 2qsa_A DNAJ homolog DNJ-2; J-d 99.8 1.5E-19 5.3E-24 141.6 6.0 71 113-183 13-86 (109)
18 2ys8_A RAB-related GTP-binding 99.8 1E-18 3.4E-23 132.7 6.8 61 114-176 26-86 (90)
19 3apq_A DNAJ homolog subfamily 99.7 8.1E-19 2.8E-23 150.0 6.0 71 115-186 2-72 (210)
20 3hho_A CO-chaperone protein HS 99.7 7.5E-18 2.6E-22 142.6 6.4 70 114-183 3-78 (174)
21 1iur_A KIAA0730 protein; DNAJ 99.7 3.4E-18 1.2E-22 129.6 3.0 64 113-176 14-77 (88)
22 1fpo_A HSC20, chaperone protei 99.7 1.4E-17 4.7E-22 140.6 5.5 68 116-183 2-75 (171)
23 3lz8_A Putative chaperone DNAJ 99.7 2.1E-18 7E-23 159.4 0.0 69 114-184 27-95 (329)
24 1faf_A Large T antigen; J doma 99.7 1.1E-17 3.8E-22 124.1 3.3 61 114-179 10-72 (79)
25 1gh6_A Large T antigen; tumor 99.7 2E-18 7E-23 136.7 -1.1 64 114-182 7-72 (114)
26 2pf4_E Small T antigen; PP2A, 99.7 4.3E-18 1.5E-22 144.0 0.2 65 114-183 10-76 (174)
27 3bvo_A CO-chaperone protein HS 99.7 4.6E-17 1.6E-21 141.3 6.6 70 114-183 42-117 (207)
28 1n4c_A Auxilin; four helix bun 99.6 3E-17 1E-21 139.6 2.7 65 114-178 116-182 (182)
29 2qwo_B Putative tyrosine-prote 99.6 8E-17 2.7E-21 123.0 3.3 57 115-171 33-91 (92)
30 3uo3_A J-type CO-chaperone JAC 99.6 1.1E-16 3.8E-21 136.3 4.3 67 112-182 8-81 (181)
31 2guz_A Mitochondrial import in 99.6 9.5E-17 3.3E-21 116.7 2.2 56 115-175 14-70 (71)
32 3ag7_A Putative uncharacterize 99.6 1.4E-16 4.8E-21 124.6 3.2 60 113-173 39-104 (106)
33 3apo_A DNAJ homolog subfamily 99.5 4.4E-16 1.5E-20 156.4 0.4 75 113-188 19-93 (780)
34 2y4t_A DNAJ homolog subfamily 99.2 3.3E-11 1.1E-15 109.6 6.6 68 113-180 380-449 (450)
35 2guz_B Mitochondrial import in 98.9 1.4E-09 4.8E-14 77.6 4.3 53 115-172 4-59 (65)
36 2pzi_A Probable serine/threoni 92.9 0.12 4E-06 50.8 5.8 59 101-168 615-675 (681)
37 3arc_T Photosystem II reaction 42.7 25 0.00086 21.0 3.0 20 239-258 8-27 (32)
38 1uzc_A Hypothetical protein FL 34.3 76 0.0026 22.0 5.1 54 126-183 11-67 (71)
39 2b7e_A PRE-mRNA processing pro 30.0 91 0.0031 21.1 4.7 50 130-183 3-57 (59)
40 4a3n_A Transcription factor SO 30.0 80 0.0027 20.8 4.6 41 133-179 14-54 (71)
41 2d7l_A WD repeat and HMG-box D 24.3 75 0.0026 22.3 3.7 43 133-180 17-59 (81)
42 3f27_D Transcription factor SO 24.3 1.2E+02 0.0041 20.7 4.8 41 133-180 18-58 (83)
43 2cqn_A Formin-binding protein 24.0 1.5E+02 0.0052 20.7 5.2 58 127-185 6-65 (77)
44 1hry_A Human SRY; DNA, DNA-bin 23.7 1.2E+02 0.0041 20.4 4.6 41 133-180 16-56 (76)
45 1qqr_A Streptokinase domain B; 23.6 42 0.0015 26.6 2.3 32 116-147 33-64 (138)
46 2crj_A SWI/SNF-related matrix- 23.0 1.3E+02 0.0046 21.1 4.9 42 133-180 19-60 (92)
47 1ckt_A High mobility group 1 p 22.8 1.4E+02 0.0049 19.6 4.8 43 134-180 14-56 (71)
48 1i11_A Transcription factor SO 22.5 1.1E+02 0.0037 20.9 4.2 43 133-181 16-58 (81)
49 1wz6_A HMG-box transcription f 21.7 1.3E+02 0.0045 20.5 4.5 41 133-180 19-59 (82)
50 1hme_A High mobility group pro 21.7 1.7E+02 0.0059 19.5 5.1 42 133-180 18-59 (77)
51 1wgf_A Upstream binding factor 21.1 1.2E+02 0.0042 21.3 4.3 42 133-180 32-73 (90)
No 1
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.84 E-value=2.5e-21 Score=142.60 Aligned_cols=70 Identities=43% Similarity=0.661 Sum_probs=65.2
Q ss_pred ccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhcCchHHHHhhHHhHHH
Q 024973 114 SDSHYQFLGISPSADLEEIKSAYRRLSKEYHPDTTSLPLKAASEKFLKLREVYDVLSNEESRRFYDWTLAQE 185 (259)
Q Consensus 114 ~~~~Y~iLgv~~~as~~eIK~AYrkl~~~~HPDk~~~~~~~a~~~f~~I~eAy~vLsdp~~R~~YD~~~~~~ 185 (259)
..+||+||||+++++.++||+|||+|++++|||+++.+ .+.+.|+.|++||++|+||.+|+.||..+.++
T Consensus 2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~--~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~ 71 (77)
T 1hdj_A 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEP--GAEEKFKEIAEAYDVLSDPRKREIFDRYGEEG 71 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCT--THHHHHHHHHHHHHHTTCHHHHHHHHHTCGGG
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc--cHHHHHHHHHHHHHHHCCHHHHHHHHHHcccc
Confidence 46899999999999999999999999999999999865 78899999999999999999999999987544
No 2
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.84 E-value=2.5e-21 Score=144.13 Aligned_cols=71 Identities=32% Similarity=0.540 Sum_probs=66.2
Q ss_pred CccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhcCchHHHHhhHHhH
Q 024973 113 SSDSHYQFLGISPSADLEEIKSAYRRLSKEYHPDTTSLPLKAASEKFLKLREVYDVLSNEESRRFYDWTLA 183 (259)
Q Consensus 113 ~~~~~Y~iLgv~~~as~~eIK~AYrkl~~~~HPDk~~~~~~~a~~~f~~I~eAy~vLsdp~~R~~YD~~~~ 183 (259)
...+||+||||+++++.++||+|||+|++++|||+++...+.+.++|++|++||+||+||.+|+.||..+.
T Consensus 7 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 77 (82)
T 2ej7_A 7 GMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGS 77 (82)
T ss_dssp SSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCC
T ss_pred CCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCc
Confidence 35799999999999999999999999999999999987656789999999999999999999999999764
No 3
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.83 E-value=4.9e-21 Score=148.16 Aligned_cols=73 Identities=34% Similarity=0.546 Sum_probs=66.1
Q ss_pred cCccceeccCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhcCchHHHHhhHHhHHHHH
Q 024973 115 DSHYQFLGISPSADLEEIKSAYRRLSKEYHPDTTSLPLKAASEKFLKLREVYDVLSNEESRRFYDWTLAQEAA 187 (259)
Q Consensus 115 ~~~Y~iLgv~~~as~~eIK~AYrkl~~~~HPDk~~~~~~~a~~~f~~I~eAy~vLsdp~~R~~YD~~~~~~~~ 187 (259)
.|||+||||+++|+.++||+|||+|++++|||+++...+.+.++|++|++||+||+||.+|+.||..+..+..
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~ 74 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLT 74 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC---
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccc
Confidence 5899999999999999999999999999999999876567899999999999999999999999998765544
No 4
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.83 E-value=6.9e-21 Score=143.92 Aligned_cols=72 Identities=38% Similarity=0.594 Sum_probs=66.7
Q ss_pred CccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhcCchHHHHhhHHhHHHH
Q 024973 113 SSDSHYQFLGISPSADLEEIKSAYRRLSKEYHPDTTSLPLKAASEKFLKLREVYDVLSNEESRRFYDWTLAQEA 186 (259)
Q Consensus 113 ~~~~~Y~iLgv~~~as~~eIK~AYrkl~~~~HPDk~~~~~~~a~~~f~~I~eAy~vLsdp~~R~~YD~~~~~~~ 186 (259)
...+||+||||+++|+.++||+|||+|++++|||+++.+ .+.++|++|++||+||+||.+|+.||..+....
T Consensus 5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~--~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~ 76 (88)
T 2ctr_A 5 SSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSP--DAEAKFREIAEAYETLSDANRRKEYDTLGHSAF 76 (88)
T ss_dssp CCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSH--HHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHHH
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCh--HHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccc
Confidence 467999999999999999999999999999999999864 789999999999999999999999999876544
No 5
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.83 E-value=4.8e-21 Score=141.66 Aligned_cols=70 Identities=47% Similarity=0.667 Sum_probs=64.9
Q ss_pred CccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhcCchHHHHhhHHhH
Q 024973 113 SSDSHYQFLGISPSADLEEIKSAYRRLSKEYHPDTTSLPLKAASEKFLKLREVYDVLSNEESRRFYDWTLA 183 (259)
Q Consensus 113 ~~~~~Y~iLgv~~~as~~eIK~AYrkl~~~~HPDk~~~~~~~a~~~f~~I~eAy~vLsdp~~R~~YD~~~~ 183 (259)
...+||+||||+++++.++||+|||+|++++|||+++.. +.+.++|++|++||+||+||.+|+.||..+.
T Consensus 5 ~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~-~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 74 (79)
T 2dn9_A 5 SSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDD-PKAKEKFSQLAEAYEVLSDEVKRKQYDAYGS 74 (79)
T ss_dssp CCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSC-TTHHHHHHHHHHHHHHHHSHHHHHHHHHSCC
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC-HHHHHHHHHHHHHHHHHCCHHHHHHHHhccC
Confidence 467999999999999999999999999999999999864 4788999999999999999999999999764
No 6
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.83 E-value=4.5e-21 Score=141.54 Aligned_cols=69 Identities=43% Similarity=0.682 Sum_probs=64.9
Q ss_pred CccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhcCchHHHHhhHHhH
Q 024973 113 SSDSHYQFLGISPSADLEEIKSAYRRLSKEYHPDTTSLPLKAASEKFLKLREVYDVLSNEESRRFYDWTLA 183 (259)
Q Consensus 113 ~~~~~Y~iLgv~~~as~~eIK~AYrkl~~~~HPDk~~~~~~~a~~~f~~I~eAy~vLsdp~~R~~YD~~~~ 183 (259)
...+||+||||+++++.++||+|||+|++++|||++..+ .+.+.|++|++||+||+||.+|+.||..+.
T Consensus 5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~--~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~ 73 (78)
T 2ctp_A 5 SSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAP--GATEAFKAIGTAYAVLSNPEKRKQYDQFGS 73 (78)
T ss_dssp CSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSH--HHHHHHHHHHHHHHHHTSHHHHHHHHHTCS
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc--cHHHHHHHHHHHHHHHCCHHHHHHHHHcCc
Confidence 467999999999999999999999999999999999864 789999999999999999999999999764
No 7
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.82 E-value=9.2e-21 Score=143.24 Aligned_cols=70 Identities=37% Similarity=0.697 Sum_probs=65.4
Q ss_pred CCccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhcCchHHHHhhHHhH
Q 024973 112 NSSDSHYQFLGISPSADLEEIKSAYRRLSKEYHPDTTSLPLKAASEKFLKLREVYDVLSNEESRRFYDWTLA 183 (259)
Q Consensus 112 ~~~~~~Y~iLgv~~~as~~eIK~AYrkl~~~~HPDk~~~~~~~a~~~f~~I~eAy~vLsdp~~R~~YD~~~~ 183 (259)
....+||+||||+++++.++||+|||+|++++|||+++.. .+.++|++|++||++|+||.+|..||..+.
T Consensus 14 ~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~--~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 83 (88)
T 2cug_A 14 ALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDP--GAEDRFIQISKAYEILSNEEKRTNYDHYGS 83 (88)
T ss_dssp SSSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCST--THHHHHHHHHHHHHHHHSHHHHHHHHHHTT
T ss_pred cCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCh--hHHHHHHHHHHHHHHHCCHHHHHHHHHcCC
Confidence 3468999999999999999999999999999999999874 789999999999999999999999999864
No 8
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.82 E-value=6.6e-21 Score=147.10 Aligned_cols=72 Identities=36% Similarity=0.575 Sum_probs=65.8
Q ss_pred CccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhcCchHHHHhhHHhHHH
Q 024973 113 SSDSHYQFLGISPSADLEEIKSAYRRLSKEYHPDTTSLPLKAASEKFLKLREVYDVLSNEESRRFYDWTLAQE 185 (259)
Q Consensus 113 ~~~~~Y~iLgv~~~as~~eIK~AYrkl~~~~HPDk~~~~~~~a~~~f~~I~eAy~vLsdp~~R~~YD~~~~~~ 185 (259)
...+||+||||+++|+.++||+|||+|+++||||+++.. +.+.++|++|++||+||+||.+|+.||..+...
T Consensus 15 ~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~~ 86 (99)
T 2yua_A 15 SRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGS-AEAAERFTRISQAYVVLGSATLRRKYDRGLLSD 86 (99)
T ss_dssp CSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSC-SHHHHHHHHHHHHHHHTTSHHHHHHHHHTCCCH
T ss_pred CccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC-HHHHHHHHHHHHHHHHHCCHHHHHHHHHhcccc
Confidence 467999999999999999999999999999999999754 478899999999999999999999999976443
No 9
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.82 E-value=1e-20 Score=149.19 Aligned_cols=73 Identities=30% Similarity=0.466 Sum_probs=66.9
Q ss_pred CccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhcCchHHHHhhHHhHHHH
Q 024973 113 SSDSHYQFLGISPSADLEEIKSAYRRLSKEYHPDTTSLPLKAASEKFLKLREVYDVLSNEESRRFYDWTLAQEA 186 (259)
Q Consensus 113 ~~~~~Y~iLgv~~~as~~eIK~AYrkl~~~~HPDk~~~~~~~a~~~f~~I~eAy~vLsdp~~R~~YD~~~~~~~ 186 (259)
...|||+||||+++|+.++||+|||+|++++|||+++.. +.+.++|++|++||+||+||.+|+.||..+..+.
T Consensus 18 ~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~ 90 (112)
T 2ctq_A 18 DTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPEN-PKAVETFQKLQKAKEILTNEESRARYDHWRRSQM 90 (112)
T ss_dssp CCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTC-STHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTC
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-HHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhcc
Confidence 458999999999999999999999999999999999854 4789999999999999999999999999876543
No 10
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.82 E-value=7.9e-21 Score=144.55 Aligned_cols=72 Identities=36% Similarity=0.603 Sum_probs=66.7
Q ss_pred CccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhcCchHHHHhhHHhHH
Q 024973 113 SSDSHYQFLGISPSADLEEIKSAYRRLSKEYHPDTTSLPLKAASEKFLKLREVYDVLSNEESRRFYDWTLAQ 184 (259)
Q Consensus 113 ~~~~~Y~iLgv~~~as~~eIK~AYrkl~~~~HPDk~~~~~~~a~~~f~~I~eAy~vLsdp~~R~~YD~~~~~ 184 (259)
...+||+||||+++++.++||+|||+|++++|||+++...+.+.++|++|++||+||+||.+|+.||..+..
T Consensus 7 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~ 78 (92)
T 2dmx_A 7 GMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCD 78 (92)
T ss_dssp CCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSC
T ss_pred CCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcc
Confidence 357999999999999999999999999999999999876568899999999999999999999999998643
No 11
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.82 E-value=9.2e-21 Score=138.27 Aligned_cols=66 Identities=35% Similarity=0.675 Sum_probs=61.1
Q ss_pred ccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhcCchHHHHhhHHhH
Q 024973 114 SDSHYQFLGISPSADLEEIKSAYRRLSKEYHPDTTSLPLKAASEKFLKLREVYDVLSNEESRRFYDWTLA 183 (259)
Q Consensus 114 ~~~~Y~iLgv~~~as~~eIK~AYrkl~~~~HPDk~~~~~~~a~~~f~~I~eAy~vLsdp~~R~~YD~~~~ 183 (259)
..+||+||||+++++.++||+|||+|++++|||+++.. .+.|++|++||+||+||.+|+.||..|.
T Consensus 7 ~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~----~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 72 (73)
T 2och_A 7 ETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDG----AEQFKQISQAYEVLSDEKKRQIYDQGGE 72 (73)
T ss_dssp CCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTC----HHHHHHHHHHHHHHTSHHHHHHHHHTC-
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCH----HHHHHHHHHHHHHHCCHHHHHHHHhcCC
Confidence 57999999999999999999999999999999999743 5799999999999999999999999764
No 12
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.82 E-value=1.7e-20 Score=147.37 Aligned_cols=76 Identities=29% Similarity=0.515 Sum_probs=68.9
Q ss_pred cCCccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhcCchHHHHhhHHhHHHHH
Q 024973 111 NNSSDSHYQFLGISPSADLEEIKSAYRRLSKEYHPDTTSLPLKAASEKFLKLREVYDVLSNEESRRFYDWTLAQEAA 187 (259)
Q Consensus 111 ~~~~~~~Y~iLgv~~~as~~eIK~AYrkl~~~~HPDk~~~~~~~a~~~f~~I~eAy~vLsdp~~R~~YD~~~~~~~~ 187 (259)
.....+||+||||+++|+.++||+|||+|++++|||+++.. +.+.++|++|++||+||+||.+|+.||..+..+..
T Consensus 13 ~~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~-~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~~ 88 (109)
T 2ctw_A 13 STSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDN-PEAADKFKEINNAHAILTDATKRNIYDKYGSLGLY 88 (109)
T ss_dssp TSCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTC-HHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHHHH
T ss_pred CCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCc-HHHHHHHHHHHHHHHHHcCHHHHHHHHHhcccccc
Confidence 34568999999999999999999999999999999999864 47899999999999999999999999998876554
No 13
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.81 E-value=8.7e-21 Score=144.56 Aligned_cols=71 Identities=31% Similarity=0.657 Sum_probs=64.8
Q ss_pred CccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCCCCc-----hhHHHHHHHHHHHHHHHhcCchHHHHhhHHhH
Q 024973 113 SSDSHYQFLGISPSADLEEIKSAYRRLSKEYHPDTTSLP-----LKAASEKFLKLREVYDVLSNEESRRFYDWTLA 183 (259)
Q Consensus 113 ~~~~~Y~iLgv~~~as~~eIK~AYrkl~~~~HPDk~~~~-----~~~a~~~f~~I~eAy~vLsdp~~R~~YD~~~~ 183 (259)
...+||+||||+++|+.++||+|||+|+++||||+++.. .+.+.++|++|++||+||+||.+|+.||..+.
T Consensus 14 ~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~ 89 (94)
T 1wjz_A 14 LKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS 89 (94)
T ss_dssp SCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred CCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHcc
Confidence 357999999999999999999999999999999998742 24788999999999999999999999999864
No 14
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.81 E-value=6.3e-22 Score=164.25 Aligned_cols=133 Identities=23% Similarity=0.402 Sum_probs=90.8
Q ss_pred CccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCCCCch-----hHHHHHHHHHHHHHHHhcCchHHHHhhHHhHHHHH
Q 024973 113 SSDSHYQFLGISPSADLEEIKSAYRRLSKEYHPDTTSLPL-----KAASEKFLKLREVYDVLSNEESRRFYDWTLAQEAA 187 (259)
Q Consensus 113 ~~~~~Y~iLgv~~~as~~eIK~AYrkl~~~~HPDk~~~~~-----~~a~~~f~~I~eAy~vLsdp~~R~~YD~~~~~~~~ 187 (259)
...|||+||||+++++.++||+|||+|++++||||++... +.+.++|++|++||+||+||.+|+.||..+.....
T Consensus 8 ~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~~~~~ 87 (155)
T 2l6l_A 8 PKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRCEDDL 87 (155)
T ss_dssp CCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHHHHHH
T ss_pred CCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcchhhc
Confidence 4579999999999999999999999999999999987642 24789999999999999999999999998765443
Q ss_pred hhHHHhhhccc-CChhHHHhcccCCCchhhhhccCcccccchhhhhhhhhhhHHHHHHHHHHHHHHhh
Q 024973 188 SRKAEKLKMKF-EDPYDQALKNYGSIPDMVDRLGGRNMELSDQAMTALTFDVVVIIFTFCCIIYALYF 254 (259)
Q Consensus 188 ~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~~~gg~~~~~~~~~~~~~~~~~~i~v~~~~c~l~i~~~ 254 (259)
... ......+ .+.++ +..........|+||+......+....+ ++|.|..|++++.++
T Consensus 88 ~~~-~~~~~~~~~~~m~--~~e~~~~f~~~CrCG~~f~i~~~~l~~~------~~v~C~sCSl~~~v~ 146 (155)
T 2l6l_A 88 RNV-GPVDAQVYLEEMS--WNEGDHSFYLSCRCGGKYSVSKDEAEEV------SLISCDTCSLIIELL 146 (155)
T ss_dssp HTT-CSSSEEEETTTSE--EETTTTEEEEECSSSCEEEEETTHHHHC------CEEECSSSSCEEEEE
T ss_pred ccc-ccccceeeHHHhc--cccCCcEEEEcCCCCCeEEecHHHhCCC------CEEECCCCceEEEEE
Confidence 221 0000000 00000 0001122345578887755443322211 467888888776554
No 15
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.80 E-value=3.2e-20 Score=141.47 Aligned_cols=71 Identities=35% Similarity=0.655 Sum_probs=64.8
Q ss_pred ccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhcCchHHHHhhHHhHHHHHh
Q 024973 114 SDSHYQFLGISPSADLEEIKSAYRRLSKEYHPDTTSLPLKAASEKFLKLREVYDVLSNEESRRFYDWTLAQEAAS 188 (259)
Q Consensus 114 ~~~~Y~iLgv~~~as~~eIK~AYrkl~~~~HPDk~~~~~~~a~~~f~~I~eAy~vLsdp~~R~~YD~~~~~~~~~ 188 (259)
..+||+||||+++++.++||+|||+|++++|||+++.. .++|++|++||+||+||.+|+.||..+......
T Consensus 7 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~----~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~ 77 (92)
T 2o37_A 7 ETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD----TEKFKEISEAFEILNDPQKREIYDQYGLEAARS 77 (92)
T ss_dssp CCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCC----HHHHHHHHHHHHHHTSHHHHHHHHHHCHHHHHT
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh----HHHHHHHHHHHHHHCCHHHHHHHHHHCHHHhhc
Confidence 57999999999999999999999999999999999753 469999999999999999999999998766543
No 16
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.79 E-value=1.4e-20 Score=146.14 Aligned_cols=72 Identities=36% Similarity=0.619 Sum_probs=66.0
Q ss_pred ccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhcCchHHHHhhHHhHHHH
Q 024973 114 SDSHYQFLGISPSADLEEIKSAYRRLSKEYHPDTTSLPLKAASEKFLKLREVYDVLSNEESRRFYDWTLAQEA 186 (259)
Q Consensus 114 ~~~~Y~iLgv~~~as~~eIK~AYrkl~~~~HPDk~~~~~~~a~~~f~~I~eAy~vLsdp~~R~~YD~~~~~~~ 186 (259)
..+||+||||+++|+.++||+|||+|++++|||+++.. +.+.++|++|++||+||+||.+|+.||..+....
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~ 73 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGD-KEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAF 73 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTT-CTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSS
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCc-HHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhh
Confidence 46899999999999999999999999999999999854 4788999999999999999999999999876543
No 17
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.78 E-value=1.5e-19 Score=141.56 Aligned_cols=71 Identities=27% Similarity=0.520 Sum_probs=65.3
Q ss_pred CccCccceeccCCCC-CHHHHHHHHHHHHHHhCCCCCCC--chhHHHHHHHHHHHHHHHhcCchHHHHhhHHhH
Q 024973 113 SSDSHYQFLGISPSA-DLEEIKSAYRRLSKEYHPDTTSL--PLKAASEKFLKLREVYDVLSNEESRRFYDWTLA 183 (259)
Q Consensus 113 ~~~~~Y~iLgv~~~a-s~~eIK~AYrkl~~~~HPDk~~~--~~~~a~~~f~~I~eAy~vLsdp~~R~~YD~~~~ 183 (259)
...+||+||||+++| +.++||+|||+|++++|||+++. ..+.+.++|++|++||+||+||.+|+.||..+.
T Consensus 13 ~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~ 86 (109)
T 2qsa_A 13 GLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLD 86 (109)
T ss_dssp TTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred CCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence 468999999999999 99999999999999999999975 235789999999999999999999999999874
No 18
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.75 E-value=1e-18 Score=132.72 Aligned_cols=61 Identities=26% Similarity=0.500 Sum_probs=57.7
Q ss_pred ccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhcCchHHH
Q 024973 114 SDSHYQFLGISPSADLEEIKSAYRRLSKEYHPDTTSLPLKAASEKFLKLREVYDVLSNEESRR 176 (259)
Q Consensus 114 ~~~~Y~iLgv~~~as~~eIK~AYrkl~~~~HPDk~~~~~~~a~~~f~~I~eAy~vLsdp~~R~ 176 (259)
..+||+||||+++|+.++||+|||+|+++||||+++.. .+.++|++|++||++|+||.+|.
T Consensus 26 ~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~--~~~~~f~~i~~Ay~~L~d~~~R~ 86 (90)
T 2ys8_A 26 SKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAP--GSEDAFKAVVNARTALLKNIKSG 86 (90)
T ss_dssp CSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCT--THHHHHHHHHHHHHHHHHHHCCS
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCc--cHHHHHHHHHHHHHHHCCccccc
Confidence 58999999999999999999999999999999999864 78899999999999999999875
No 19
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.75 E-value=8.1e-19 Score=150.03 Aligned_cols=71 Identities=32% Similarity=0.574 Sum_probs=65.6
Q ss_pred cCccceeccCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhcCchHHHHhhHHhHHHH
Q 024973 115 DSHYQFLGISPSADLEEIKSAYRRLSKEYHPDTTSLPLKAASEKFLKLREVYDVLSNEESRRFYDWTLAQEA 186 (259)
Q Consensus 115 ~~~Y~iLgv~~~as~~eIK~AYrkl~~~~HPDk~~~~~~~a~~~f~~I~eAy~vLsdp~~R~~YD~~~~~~~ 186 (259)
.|||+||||+++|+.++||+|||+|++++|||+++.. +.+.++|++|++||++|+||.+|+.||..+..+.
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~-~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~ 72 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNN-PNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGL 72 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTC-TTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTC
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC-hHHHHHHHHHHHHHHHhCCHHHHHHHHHhccccc
Confidence 5899999999999999999999999999999999754 4788999999999999999999999999876554
No 20
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.71 E-value=7.5e-18 Score=142.58 Aligned_cols=70 Identities=20% Similarity=0.362 Sum_probs=63.0
Q ss_pred ccCccceeccCCCCC--HHHHHHHHHHHHHHhCCCCCCCch----hHHHHHHHHHHHHHHHhcCchHHHHhhHHhH
Q 024973 114 SDSHYQFLGISPSAD--LEEIKSAYRRLSKEYHPDTTSLPL----KAASEKFLKLREVYDVLSNEESRRFYDWTLA 183 (259)
Q Consensus 114 ~~~~Y~iLgv~~~as--~~eIK~AYrkl~~~~HPDk~~~~~----~~a~~~f~~I~eAy~vLsdp~~R~~YD~~~~ 183 (259)
..|||+||||+++++ .++||++||+|+++||||+++... ..+.++|+.|++||+||+||.+|..||..+.
T Consensus 3 ~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~ 78 (174)
T 3hho_A 3 AMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLSLQ 78 (174)
T ss_dssp -CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHT
T ss_pred CCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHcc
Confidence 579999999999988 999999999999999999987652 1377999999999999999999999999874
No 21
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.70 E-value=3.4e-18 Score=129.55 Aligned_cols=64 Identities=20% Similarity=0.164 Sum_probs=58.4
Q ss_pred CccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhcCchHHH
Q 024973 113 SSDSHYQFLGISPSADLEEIKSAYRRLSKEYHPDTTSLPLKAASEKFLKLREVYDVLSNEESRR 176 (259)
Q Consensus 113 ~~~~~Y~iLgv~~~as~~eIK~AYrkl~~~~HPDk~~~~~~~a~~~f~~I~eAy~vLsdp~~R~ 176 (259)
...++|+||||+++|+.+|||+|||+|+++||||+++...+.++++|++|++||+||+|...|.
T Consensus 14 ~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r~ 77 (88)
T 1iur_A 14 ILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLD 77 (88)
T ss_dssp CHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred cHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhcccc
Confidence 3468999999999999999999999999999999998865678999999999999999987663
No 22
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.69 E-value=1.4e-17 Score=140.64 Aligned_cols=68 Identities=19% Similarity=0.363 Sum_probs=62.1
Q ss_pred CccceeccCCCC--CHHHHHHHHHHHHHHhCCCCCCCch----hHHHHHHHHHHHHHHHhcCchHHHHhhHHhH
Q 024973 116 SHYQFLGISPSA--DLEEIKSAYRRLSKEYHPDTTSLPL----KAASEKFLKLREVYDVLSNEESRRFYDWTLA 183 (259)
Q Consensus 116 ~~Y~iLgv~~~a--s~~eIK~AYrkl~~~~HPDk~~~~~----~~a~~~f~~I~eAy~vLsdp~~R~~YD~~~~ 183 (259)
|||+||||++++ +.++||++||+|+++||||+++... ..+.++|+.|++||+||+||.+|..||..+.
T Consensus 2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~ 75 (171)
T 1fpo_A 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLH 75 (171)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHTT
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHhc
Confidence 799999999999 9999999999999999999987642 2467899999999999999999999999865
No 23
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.68 E-value=2.1e-18 Score=159.36 Aligned_cols=69 Identities=41% Similarity=0.714 Sum_probs=0.0
Q ss_pred ccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhcCchHHHHhhHHhHH
Q 024973 114 SDSHYQFLGISPSADLEEIKSAYRRLSKEYHPDTTSLPLKAASEKFLKLREVYDVLSNEESRRFYDWTLAQ 184 (259)
Q Consensus 114 ~~~~Y~iLgv~~~as~~eIK~AYrkl~~~~HPDk~~~~~~~a~~~f~~I~eAy~vLsdp~~R~~YD~~~~~ 184 (259)
.+|||+||||+++||.+|||+|||+|+++||||+++.+ .++++|++|++||+||+||.+|+.||..+..
T Consensus 27 ~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~--~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 95 (329)
T 3lz8_A 27 LKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKEN--DAEAKFKDLAEAWEVLKDEQRRAEYDQLWQH 95 (329)
T ss_dssp -----------------------------------------------------------------------
T ss_pred ccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCCh--HHHHHHHHHHHHHHHhhhhhhhcccchhhcc
Confidence 47999999999999999999999999999999999865 7899999999999999999999999998543
No 24
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.68 E-value=1.1e-17 Score=124.14 Aligned_cols=61 Identities=16% Similarity=0.303 Sum_probs=55.4
Q ss_pred ccCccceeccCCC--CCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhcCchHHHHhh
Q 024973 114 SDSHYQFLGISPS--ADLEEIKSAYRRLSKEYHPDTTSLPLKAASEKFLKLREVYDVLSNEESRRFYD 179 (259)
Q Consensus 114 ~~~~Y~iLgv~~~--as~~eIK~AYrkl~~~~HPDk~~~~~~~a~~~f~~I~eAy~vLsdp~~R~~YD 179 (259)
..++|+||||+++ ++.++||+|||+|++++|||+++. .++|++|++||++|+|+.+|..++
T Consensus 10 ~~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~-----~~~f~~i~~AYe~L~~~~~r~~~~ 72 (79)
T 1faf_A 10 KERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS-----HALMQELNSLWGTFKTEVYNLRMN 72 (79)
T ss_dssp HHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC-----HHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-----HHHHHHHHHHHHHHhhHHHHHHHh
Confidence 3578999999999 999999999999999999999853 479999999999999999998743
No 25
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.67 E-value=2e-18 Score=136.74 Aligned_cols=64 Identities=25% Similarity=0.263 Sum_probs=59.0
Q ss_pred ccCccceeccCCCCCH--HHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhcCchHHHHhhHHh
Q 024973 114 SDSHYQFLGISPSADL--EEIKSAYRRLSKEYHPDTTSLPLKAASEKFLKLREVYDVLSNEESRRFYDWTL 182 (259)
Q Consensus 114 ~~~~Y~iLgv~~~as~--~eIK~AYrkl~~~~HPDk~~~~~~~a~~~f~~I~eAy~vLsdp~~R~~YD~~~ 182 (259)
..++|+||||+++|+. ++||+|||+|++++|||+++. .++|++|++||+||+||.+|+.||..+
T Consensus 7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~-----~e~f~~I~~AYevL~d~~~R~~~~~~~ 72 (114)
T 1gh6_A 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD-----EEKMKKMNTLYKKMEDGVKYAHQPDFG 72 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT-----TTTTHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc-----HHHHHHHHHHHHHHCCHHHHHHhhhcc
Confidence 3689999999999999 999999999999999999875 379999999999999999999999653
No 26
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.67 E-value=4.3e-18 Score=144.01 Aligned_cols=65 Identities=25% Similarity=0.295 Sum_probs=57.6
Q ss_pred ccCccceeccCCCCC--HHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhcCchHHHHhhHHhH
Q 024973 114 SDSHYQFLGISPSAD--LEEIKSAYRRLSKEYHPDTTSLPLKAASEKFLKLREVYDVLSNEESRRFYDWTLA 183 (259)
Q Consensus 114 ~~~~Y~iLgv~~~as--~~eIK~AYrkl~~~~HPDk~~~~~~~a~~~f~~I~eAy~vLsdp~~R~~YD~~~~ 183 (259)
..++|+||||+++|+ .++||+|||++++++|||++++. ++|++|++||+||+||.+|+.||..+.
T Consensus 10 ~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~~-----e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 10 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDE-----EKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---CC-----TTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred cccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCCH-----HHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 468999999999998 69999999999999999998653 799999999999999999999999864
No 27
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.67 E-value=4.6e-17 Score=141.34 Aligned_cols=70 Identities=20% Similarity=0.312 Sum_probs=62.3
Q ss_pred ccCccceeccCCC--CCHHHHHHHHHHHHHHhCCCCCCCc----hhHHHHHHHHHHHHHHHhcCchHHHHhhHHhH
Q 024973 114 SDSHYQFLGISPS--ADLEEIKSAYRRLSKEYHPDTTSLP----LKAASEKFLKLREVYDVLSNEESRRFYDWTLA 183 (259)
Q Consensus 114 ~~~~Y~iLgv~~~--as~~eIK~AYrkl~~~~HPDk~~~~----~~~a~~~f~~I~eAy~vLsdp~~R~~YD~~~~ 183 (259)
..|||+||||+++ ++.++||++||+|++++|||+++.. ...+.++|++|++||+||+||.+|+.||..+.
T Consensus 42 ~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~~l~ 117 (207)
T 3bvo_A 42 TRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLLKLH 117 (207)
T ss_dssp TCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHT
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhc
Confidence 5799999999986 7999999999999999999998753 12467899999999999999999999998654
No 28
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.65 E-value=3e-17 Score=139.65 Aligned_cols=65 Identities=20% Similarity=0.416 Sum_probs=59.2
Q ss_pred ccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCCCCchh--HHHHHHHHHHHHHHHhcCchHHHHh
Q 024973 114 SDSHYQFLGISPSADLEEIKSAYRRLSKEYHPDTTSLPLK--AASEKFLKLREVYDVLSNEESRRFY 178 (259)
Q Consensus 114 ~~~~Y~iLgv~~~as~~eIK~AYrkl~~~~HPDk~~~~~~--~a~~~f~~I~eAy~vLsdp~~R~~Y 178 (259)
..++|+||||+++|+.++||+|||+|++++||||++.... .++++|++|++||+||+|+.+|+.|
T Consensus 116 ~~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 116 GETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp TCCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred ccchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 3699999999999999999999999999999999876522 3889999999999999999999876
No 29
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.63 E-value=8e-17 Score=122.95 Aligned_cols=57 Identities=19% Similarity=0.373 Sum_probs=52.0
Q ss_pred cCccceeccCCCCCHHHHHHHHHHHHHHhCCCCCCCch--hHHHHHHHHHHHHHHHhcC
Q 024973 115 DSHYQFLGISPSADLEEIKSAYRRLSKEYHPDTTSLPL--KAASEKFLKLREVYDVLSN 171 (259)
Q Consensus 115 ~~~Y~iLgv~~~as~~eIK~AYrkl~~~~HPDk~~~~~--~~a~~~f~~I~eAy~vLsd 171 (259)
.++|++|||+++||.++||+|||+++++|||||+++.. ..++++|+.|++||+||.+
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 58999999999999999999999999999999998652 2488999999999999975
No 30
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.63 E-value=1.1e-16 Score=136.29 Aligned_cols=67 Identities=24% Similarity=0.440 Sum_probs=61.0
Q ss_pred CCccCcccee------ccCC-CCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhcCchHHHHhhHHh
Q 024973 112 NSSDSHYQFL------GISP-SADLEEIKSAYRRLSKEYHPDTTSLPLKAASEKFLKLREVYDVLSNEESRRFYDWTL 182 (259)
Q Consensus 112 ~~~~~~Y~iL------gv~~-~as~~eIK~AYrkl~~~~HPDk~~~~~~~a~~~f~~I~eAy~vLsdp~~R~~YD~~~ 182 (259)
....|||+|| |+++ +++.++||+|||+|++++|||+++. +.++|++|++||+||+||.+|..||..+
T Consensus 8 ~~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~----a~~~f~~i~~AY~vL~dp~~R~~Yd~~l 81 (181)
T 3uo3_A 8 RFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ----GSEQSSTLNQAYHTLKDPLRRSQYMLKL 81 (181)
T ss_dssp CCSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS----CSSGGGSHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc----HHHHHHHHHHHHHHHcChHHHHHHHHHH
Confidence 3468999999 4665 8999999999999999999999975 5679999999999999999999999987
No 31
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.62 E-value=9.5e-17 Score=116.66 Aligned_cols=56 Identities=20% Similarity=0.261 Sum_probs=51.0
Q ss_pred cCccceeccCC-CCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhcCchHH
Q 024973 115 DSHYQFLGISP-SADLEEIKSAYRRLSKEYHPDTTSLPLKAASEKFLKLREVYDVLSNEESR 175 (259)
Q Consensus 115 ~~~Y~iLgv~~-~as~~eIK~AYrkl~~~~HPDk~~~~~~~a~~~f~~I~eAy~vLsdp~~R 175 (259)
.++|+||||++ +++.++||+|||+|++++|||++++ .+.|++|++||++|+|+..|
T Consensus 14 ~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g~-----~~~f~~i~~Aye~L~~~~~r 70 (71)
T 2guz_A 14 KEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGS-----PFLATKINEAKDFLEKRGIS 70 (71)
T ss_dssp HHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTCC-----HHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-----HHHHHHHHHHHHHHhhhhhc
Confidence 58899999999 7999999999999999999999743 36999999999999998765
No 32
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.61 E-value=1.4e-16 Score=124.63 Aligned_cols=60 Identities=18% Similarity=0.201 Sum_probs=52.7
Q ss_pred CccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCCCCc------hhHHHHHHHHHHHHHHHhcCch
Q 024973 113 SSDSHYQFLGISPSADLEEIKSAYRRLSKEYHPDTTSLP------LKAASEKFLKLREVYDVLSNEE 173 (259)
Q Consensus 113 ~~~~~Y~iLgv~~~as~~eIK~AYrkl~~~~HPDk~~~~------~~~a~~~f~~I~eAy~vLsdp~ 173 (259)
...+||+|||++. ||.++||+|||++++++||||++.. ...++++|++|++||+||+|+.
T Consensus 39 ~~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 39 SGSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp TTSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred ccCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 3579999999996 9999999999999999999997631 1247899999999999999985
No 33
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.55 E-value=4.4e-16 Score=156.44 Aligned_cols=75 Identities=31% Similarity=0.547 Sum_probs=40.8
Q ss_pred CccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhcCchHHHHhhHHhHHHHHh
Q 024973 113 SSDSHYQFLGISPSADLEEIKSAYRRLSKEYHPDTTSLPLKAASEKFLKLREVYDVLSNEESRRFYDWTLAQEAAS 188 (259)
Q Consensus 113 ~~~~~Y~iLgv~~~as~~eIK~AYrkl~~~~HPDk~~~~~~~a~~~f~~I~eAy~vLsdp~~R~~YD~~~~~~~~~ 188 (259)
...|||+||||+++||.++||+|||+|++++|||+++.. +.+.++|++|++||++|+||.+|+.||..+..+...
T Consensus 19 ~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~-~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~~ 93 (780)
T 3apo_A 19 HDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNN-PNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLED 93 (780)
T ss_dssp ----CHHHHTCCTTCCHHHHHHHHCC------------------------CTHHHHHHSHHHHHHHTTC-------
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC-hHHHHHHHHHHHHHHHHcChHHHHHHHhhccccccc
Confidence 467999999999999999999999999999999999754 478899999999999999999999999988765543
No 34
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.15 E-value=3.3e-11 Score=109.56 Aligned_cols=68 Identities=34% Similarity=0.553 Sum_probs=58.4
Q ss_pred CccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCCCCch--hHHHHHHHHHHHHHHHhcCchHHHHhhH
Q 024973 113 SSDSHYQFLGISPSADLEEIKSAYRRLSKEYHPDTTSLPL--KAASEKFLKLREVYDVLSNEESRRFYDW 180 (259)
Q Consensus 113 ~~~~~Y~iLgv~~~as~~eIK~AYrkl~~~~HPDk~~~~~--~~a~~~f~~I~eAy~vLsdp~~R~~YD~ 180 (259)
...++|.+||+.+.++.++|+++|+++++++|||+.+.+. +.+.++|+.|++||++|+||++|..||.
T Consensus 380 ~~~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~ 449 (450)
T 2y4t_A 380 QKRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD 449 (450)
T ss_dssp HSCCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred cchhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence 3569999999999999999999999999999999998763 5689999999999999999999999997
No 35
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.87 E-value=1.4e-09 Score=77.56 Aligned_cols=53 Identities=17% Similarity=0.167 Sum_probs=46.9
Q ss_pred cCccceeccCCC---CCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhcCc
Q 024973 115 DSHYQFLGISPS---ADLEEIKSAYRRLSKEYHPDTTSLPLKAASEKFLKLREVYDVLSNE 172 (259)
Q Consensus 115 ~~~Y~iLgv~~~---as~~eIK~AYrkl~~~~HPDk~~~~~~~a~~~f~~I~eAy~vLsdp 172 (259)
...|.||||+++ ++.++|+++||+|...+|||+..+ .....+|++|+++|...
T Consensus 4 ~EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS-----~yl~~ki~~Ake~l~~~ 59 (65)
T 2guz_B 4 DESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGS-----FYLQSKVYRAAERLKWE 59 (65)
T ss_dssp HHHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCC-----HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCC-----HHHHHHHHHHHHHHHHH
Confidence 356899999999 999999999999999999999754 47889999999999743
No 36
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=92.93 E-value=0.12 Score=50.79 Aligned_cols=59 Identities=15% Similarity=0.199 Sum_probs=44.2
Q ss_pred HHHHHHHHhhcCCccCccceeccCCCCCH--HHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHH
Q 024973 101 LLGEKFADLLNNSSDSHYQFLGISPSADL--EEIKSAYRRLSKEYHPDTTSLPLKAASEKFLKLREVYDV 168 (259)
Q Consensus 101 ~~~~~~~~~~~~~~~~~Y~iLgv~~~as~--~eIK~AYrkl~~~~HPDk~~~~~~~a~~~f~~I~eAy~v 168 (259)
.+.+....++....++||.+||++.+... .+|++|||++++..+++ .+++..|..|+.|
T Consensus 615 ~ll~~~l~~~~~~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~---------~~r~~lvd~a~~v 675 (681)
T 2pzi_A 615 LVLGGALDWLKDNKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ---------RHRYTLVDMANKV 675 (681)
T ss_dssp HHHHHHHHHHTSCCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH---------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh---------HHHHHHHHHhccc
Confidence 33344455666777889999999776544 67999999999976655 3688888888876
No 37
>3arc_T Photosystem II reaction center protein T; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_T* 2axt_T* 3bz1_T* 3bz2_T* 3kzi_T* 3prq_T* 3prr_T* 3a0b_T* 3a0h_T*
Probab=42.68 E-value=25 Score=20.98 Aligned_cols=20 Identities=20% Similarity=0.620 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHHHHhhcCCC
Q 024973 239 VVIIFTFCCIIYALYFKEPY 258 (259)
Q Consensus 239 ~i~v~~~~c~l~i~~~~~~~ 258 (259)
++++..++.+.|..+|.||+
T Consensus 8 ~ll~~tlgiiFFAI~FRePP 27 (32)
T 3arc_T 8 FIFACIIALFFFAIFFREPP 27 (32)
T ss_dssp HHHHHHHHHHHHHHHTSCCC
T ss_pred HHHHHHHHHHHHhhhhcCCC
Confidence 55666777777888888875
No 38
>1uzc_A Hypothetical protein FLJ21157; nuclear protein, structure, transcription, phosphopeptide recognition, RNA polymerase II carboxyl- terminal domain; NMR {Homo sapiens} SCOP: a.159.2.1 PDB: 2kzg_A 2lks_A 2l9v_A
Probab=34.32 E-value=76 Score=22.03 Aligned_cols=54 Identities=17% Similarity=0.202 Sum_probs=34.4
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHH--HHHHhcCch-HHHHhhHHhH
Q 024973 126 SADLEEIKSAYRRLSKEYHPDTTSLPLKAASEKFLKLRE--VYDVLSNEE-SRRFYDWTLA 183 (259)
Q Consensus 126 ~as~~eIK~AYrkl~~~~HPDk~~~~~~~a~~~f~~I~e--Ay~vLsdp~-~R~~YD~~~~ 183 (259)
-+|.+|.+.+|++|...++-+-.. .-.+..+.|.. -|.+|.++. ++..|+.+..
T Consensus 11 ~~t~eea~~~F~~LL~e~~V~~~~----tWe~~~~~i~~DpRY~al~~~~eRk~~F~ey~~ 67 (71)
T 1uzc_A 11 WNTKEEAKQAFKELLKEKRVPSNA----SWEQAMKMIINDPRYSALAKLSEKKQAFNAYKV 67 (71)
T ss_dssp CCSHHHHHHHHHHHHHHTTCCTTC----CHHHHHHHHHTSGGGGGCSSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHcCcCCCC----CHHHHHHHHccCccccccCCHHHHHHHHHHHHH
Confidence 469999999999999998644332 23334444443 577777644 4456766643
No 39
>2b7e_A PRE-mRNA processing protein PRP40; structural protein; NMR {Saccharomyces cerevisiae} SCOP: a.159.2.1
Probab=30.05 E-value=91 Score=21.05 Aligned_cols=50 Identities=18% Similarity=0.227 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHH---HHHHHHhcC-ch-HHHHhhHHhH
Q 024973 130 EEIKSAYRRLSKEYHPDTTSLPLKAASEKFLKL---REVYDVLSN-EE-SRRFYDWTLA 183 (259)
Q Consensus 130 ~eIK~AYrkl~~~~HPDk~~~~~~~a~~~f~~I---~eAy~vLsd-p~-~R~~YD~~~~ 183 (259)
+|..+||.+|.+...=|-.- .-++..+.| ..-|.+|.| |. ++..|+.++.
T Consensus 3 eEae~aF~~lL~~~~V~s~w----sweqamr~i~i~DPrY~al~d~~~eRK~~Fe~Y~~ 57 (59)
T 2b7e_A 3 MEAEKEFITMLKENQVDSTW----SFSRIISELGTRDPRYWMVDDDPLWKKEMFEKYLS 57 (59)
T ss_dssp THHHHHHHHHHHHTTCCSSC----CHHHHHHHHHHHCTHHHHSCCCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCCCCC----cHHHHHHHhccCCCccccccCCHHHHHHHHHHHHh
Confidence 57788999999887555442 345666666 348999997 76 4456887753
No 40
>4a3n_A Transcription factor SOX-17; 2.40A {Homo sapiens} SCOP: a.21.1.0
Probab=30.04 E-value=80 Score=20.81 Aligned_cols=41 Identities=22% Similarity=0.276 Sum_probs=30.2
Q ss_pred HHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhcCchHHHHhh
Q 024973 133 KSAYRRLSKEYHPDTTSLPLKAASEKFLKLREVYDVLSNEESRRFYD 179 (259)
Q Consensus 133 K~AYrkl~~~~HPDk~~~~~~~a~~~f~~I~eAy~vLsdp~~R~~YD 179 (259)
.+.+|..++.-||+.. ..+..+.|.+.|..|++.++....+
T Consensus 14 ~~~~r~~~~~~~p~~~------~~eisk~lg~~Wk~ls~~eK~~y~~ 54 (71)
T 4a3n_A 14 AKDERKRLAQQNPDLH------NAELSKMLGKSWKALTLAEKRPFVE 54 (71)
T ss_dssp HHHHHHHHHTTCTTSC------HHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCC------HHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 5567778888888875 3468889999999999665544433
No 41
>2d7l_A WD repeat and HMG-box DNA binding protein 1; high mobility group box domain, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.34 E-value=75 Score=22.33 Aligned_cols=43 Identities=19% Similarity=0.141 Sum_probs=31.8
Q ss_pred HHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhcCchHHHHhhH
Q 024973 133 KSAYRRLSKEYHPDTTSLPLKAASEKFLKLREVYDVLSNEESRRFYDW 180 (259)
Q Consensus 133 K~AYrkl~~~~HPDk~~~~~~~a~~~f~~I~eAy~vLsdp~~R~~YD~ 180 (259)
-..+|..++.-||+.. ...+..+.|.+.|..|++.++....|.
T Consensus 17 ~~e~R~~ik~~~P~~~-----~~~eisK~lge~Wk~ls~eeK~~y~~~ 59 (81)
T 2d7l_A 17 LEENRSNILSDNPDFS-----DEADIIKEGMIRFRVLSTEERKVWANK 59 (81)
T ss_dssp HHHHHHHHHHHCTTCC-----SHHHHHHHHHHHHSSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCc-----hhHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 4567888888899974 245788999999999997665554433
No 42
>3f27_D Transcription factor SOX-17; protein-DNA complex, HMG domain, endodermal, activator, DNA- nucleus, transcription regulation, transcrip complex; HET: DNA; 2.75A {Mus musculus} SCOP: a.21.1.1 PDB: 2yul_A
Probab=24.27 E-value=1.2e+02 Score=20.71 Aligned_cols=41 Identities=20% Similarity=0.166 Sum_probs=30.7
Q ss_pred HHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhcCchHHHHhhH
Q 024973 133 KSAYRRLSKEYHPDTTSLPLKAASEKFLKLREVYDVLSNEESRRFYDW 180 (259)
Q Consensus 133 K~AYrkl~~~~HPDk~~~~~~~a~~~f~~I~eAy~vLsdp~~R~~YD~ 180 (259)
...+|..++.-||+.. ..+..+.|.+.|..|++.++. .|..
T Consensus 18 ~~~~r~~~~~~~p~~~------~~eisk~lg~~Wk~ls~~eK~-~y~~ 58 (83)
T 3f27_D 18 AKDERKRLAQQNPDLH------NAELSKMLGKSWKALTLAEKR-PFVE 58 (83)
T ss_dssp HHHHHHHHHHHCSSSC------HHHHHHHHHHHHHHSCHHHHH-HHHH
T ss_pred HHHHHHHHHHHCCCCC------HHHHHHHHHHHHhcCCHHHHH-HHHH
Confidence 5667788888899875 346889999999999965554 4543
No 43
>2cqn_A Formin-binding protein 3; FF domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.159.2.1
Probab=23.96 E-value=1.5e+02 Score=20.69 Aligned_cols=58 Identities=17% Similarity=0.296 Sum_probs=39.7
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCCc-hhHHHHHHHHHHHHHHHhcCc-hHHHHhhHHhHHH
Q 024973 127 ADLEEIKSAYRRLSKEYHPDTTSLP-LKAASEKFLKLREVYDVLSNE-ESRRFYDWTLAQE 185 (259)
Q Consensus 127 as~~eIK~AYrkl~~~~HPDk~~~~-~~~a~~~f~~I~eAy~vLsdp-~~R~~YD~~~~~~ 185 (259)
.-...++.+|+.+.+...|...... =+.+..+|..-. +|..+.+. .++.+|+.++..-
T Consensus 6 ~r~rrl~~~F~~mLk~~~p~I~~~s~We~vr~~~e~~~-~fkav~~E~eR~~lFeeYi~~L 65 (77)
T 2cqn_A 6 SGMKRKESAFKSMLKQAAPPIELDAVWEDIRERFVKEP-AFEDITLESERKRIFKDFMHVL 65 (77)
T ss_dssp CSHHHHHHHHHHHHHTCSSCCCTTCCHHHHHHHHTTSH-HHHTCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHccCH-HHHhcCCHHHHHHHHHHHHHHH
Confidence 3466788999999998888776543 134555555544 79988664 6667888876543
No 44
>1hry_A Human SRY; DNA, DNA-binding protein, DNA binding protein/DNA complex; HET: DNA; NMR {Homo sapiens} SCOP: a.21.1.1 PDB: 1hrz_A*
Probab=23.72 E-value=1.2e+02 Score=20.36 Aligned_cols=41 Identities=17% Similarity=0.084 Sum_probs=29.2
Q ss_pred HHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhcCchHHHHhhH
Q 024973 133 KSAYRRLSKEYHPDTTSLPLKAASEKFLKLREVYDVLSNEESRRFYDW 180 (259)
Q Consensus 133 K~AYrkl~~~~HPDk~~~~~~~a~~~f~~I~eAy~vLsdp~~R~~YD~ 180 (259)
.+.+|..++.-||+.... +..+.|.+.|..|++.++ ..|-.
T Consensus 16 ~~~~r~~~~~~~p~~~~~------eisk~lg~~Wk~ls~~eK-~~y~~ 56 (76)
T 1hry_A 16 SRDQRRKMALENPRMRNS------EISKQLGYQWKMLTEAEK-WPFFQ 56 (76)
T ss_dssp HHHHHHHHHHHCSCCSSS------HHHHHHHHHHHTCCHHHH-HHHHH
T ss_pred HHHHHHHHHHHCcCCCHH------HHHHHHHhHHHhCCHHHH-HHHHH
Confidence 456677777889987543 467899999999986554 44533
No 45
>1qqr_A Streptokinase domain B; non-proteolytic, plasminogen activation, fibrinolysis, hydrolase activator; 2.30A {Streptococcus dysgalactiae subsp} SCOP: d.15.5.1 PDB: 1c4p_A
Probab=23.64 E-value=42 Score=26.55 Aligned_cols=32 Identities=16% Similarity=0.245 Sum_probs=28.6
Q ss_pred CccceeccCCCCCHHHHHHHHHHHHHHhCCCC
Q 024973 116 SHYQFLGISPSADLEEIKSAYRRLSKEYHPDT 147 (259)
Q Consensus 116 ~~Y~iLgv~~~as~~eIK~AYrkl~~~~HPDk 147 (259)
-+++.|.|....+.+|++++=..+..++||+-
T Consensus 33 ~~l~~k~ig~~Its~eL~~~AqeiL~q~hp~Y 64 (138)
T 1qqr_A 33 KLLKTLAIGDTITSQELLAQAQSILNKNHPGY 64 (138)
T ss_dssp EEEEEECTTCEEEHHHHHHHHHHHHHHHSTTE
T ss_pred hhhcccccCcccCHHHHHHHHHHHHHhcCCCc
Confidence 34788888888999999999999999999985
No 46
>2crj_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; structural DNA-binding protein BRAF35, DNA-bending; NMR {Mus musculus}
Probab=23.02 E-value=1.3e+02 Score=21.11 Aligned_cols=42 Identities=24% Similarity=0.265 Sum_probs=31.2
Q ss_pred HHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhcCchHHHHhhH
Q 024973 133 KSAYRRLSKEYHPDTTSLPLKAASEKFLKLREVYDVLSNEESRRFYDW 180 (259)
Q Consensus 133 K~AYrkl~~~~HPDk~~~~~~~a~~~f~~I~eAy~vLsdp~~R~~YD~ 180 (259)
.+.+|..++.-||+.. ..+..+.|.+.|.-|++.++....+.
T Consensus 19 ~~~~r~~~~~~~p~~~------~~eisk~lg~~Wk~ls~eeK~~Y~~~ 60 (92)
T 2crj_A 19 LNERREQIRTRHPDLP------FPEITKMLGAEWSKLQPAEKQRYLDE 60 (92)
T ss_dssp HHHHHHHHHHHCTTCC------HHHHHHHHHHHHHTCCTTHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 4566777778889864 45688999999999998776555444
No 47
>1ckt_A High mobility group 1 protein; high-mobility group domain, BENT DNA, protein-drug-DNA compl regulation-DNA complex; HET: DNA 5IU; 2.50A {Rattus norvegicus} SCOP: a.21.1.1 PDB: 1j3x_A
Probab=22.82 E-value=1.4e+02 Score=19.60 Aligned_cols=43 Identities=30% Similarity=0.359 Sum_probs=30.1
Q ss_pred HHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhcCchHHHHhhH
Q 024973 134 SAYRRLSKEYHPDTTSLPLKAASEKFLKLREVYDVLSNEESRRFYDW 180 (259)
Q Consensus 134 ~AYrkl~~~~HPDk~~~~~~~a~~~f~~I~eAy~vLsdp~~R~~YD~ 180 (259)
+..|..++.-||+... ...+..+.|.+.|..|++.++....+.
T Consensus 14 ~~~r~~~~~~~p~~~~----~~~eisk~lg~~Wk~ls~~eK~~y~~~ 56 (71)
T 1ckt_A 14 QTCREEHKKKHPDASV----NFSEFSKKCSERWKTMSAKEKGKFEDM 56 (71)
T ss_dssp HHHHHHHHHHCTTCCC----CHHHHHHHHHHHHHTCCTTTSHHHHHH
T ss_pred HHHHHHHHHHCCCCCC----cHHHHHHHHHHHHhhCCHHHHHHHHHH
Confidence 3456666777998753 235788899999999997766554443
No 48
>1i11_A Transcription factor SOX-5; HMG BOX, DNA bending, DNA recognition, chromatin, DNA binding protein, DNA sequence specific, testis determining.; NMR {Mus musculus} SCOP: a.21.1.1
Probab=22.49 E-value=1.1e+02 Score=20.93 Aligned_cols=43 Identities=21% Similarity=0.245 Sum_probs=31.3
Q ss_pred HHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhcCchHHHHhhHH
Q 024973 133 KSAYRRLSKEYHPDTTSLPLKAASEKFLKLREVYDVLSNEESRRFYDWT 181 (259)
Q Consensus 133 K~AYrkl~~~~HPDk~~~~~~~a~~~f~~I~eAy~vLsdp~~R~~YD~~ 181 (259)
.+.+|..++.-||+.. ..+..+.|.+.|.-|++.++...++..
T Consensus 16 ~~~~r~~~~~~~p~~~------~~eisk~lg~~Wk~ls~eeK~~y~~~A 58 (81)
T 1i11_A 16 AKDERRKILQAFPDMH------NSNISKILGSRWKAMTNLEKQPYYEEQ 58 (81)
T ss_dssp HHHHHHHHHTTCSSCC------HHHHHHHHHHHHTTSCSGGGHHHHHHH
T ss_pred HHHHHHHHHHHCCCCC------HHHHHHHHHhhhhhCCHHHHHHHHHHH
Confidence 4556777777788764 446788999999999987665555543
No 49
>1wz6_A HMG-box transcription factor BBX; bobby SOX homolog, HMG_BOX domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative; NMR {Mus musculus}
Probab=21.69 E-value=1.3e+02 Score=20.54 Aligned_cols=41 Identities=22% Similarity=0.220 Sum_probs=29.7
Q ss_pred HHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhcCchHHHHhhH
Q 024973 133 KSAYRRLSKEYHPDTTSLPLKAASEKFLKLREVYDVLSNEESRRFYDW 180 (259)
Q Consensus 133 K~AYrkl~~~~HPDk~~~~~~~a~~~f~~I~eAy~vLsdp~~R~~YD~ 180 (259)
.+.+|..++.-||+.... +..+.|.+.|.-|++.++ ..|..
T Consensus 19 ~~~~r~~~~~~~p~~~~~------eisk~lg~~Wk~ls~~eK-~~y~~ 59 (82)
T 1wz6_A 19 CKRHRSLVRQEHPRLDNR------GATKILADWWAVLDPKEK-QKYTD 59 (82)
T ss_dssp HHHHHHHHHHHCSSSCTT------HHHHHHHHHHHTCCHHHH-HHHHH
T ss_pred HHHHHHHHHHHCCCCCHH------HHHHHHHHHHhhCCHHHH-HHHHH
Confidence 456777788889986533 577899999999997554 44543
No 50
>1hme_A High mobility group protein fragment-B; DNA-binding; NMR {Rattus norvegicus} SCOP: a.21.1.1 PDB: 1hmf_A 1nhm_A 1nhn_A 1hsm_A 1hsn_A 1j3c_A 1j3d_A 2yqi_A
Probab=21.66 E-value=1.7e+02 Score=19.54 Aligned_cols=42 Identities=21% Similarity=0.298 Sum_probs=29.9
Q ss_pred HHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhcCchHHHHhhH
Q 024973 133 KSAYRRLSKEYHPDTTSLPLKAASEKFLKLREVYDVLSNEESRRFYDW 180 (259)
Q Consensus 133 K~AYrkl~~~~HPDk~~~~~~~a~~~f~~I~eAy~vLsdp~~R~~YD~ 180 (259)
.+..|..++.-||+.. ..+..+.|.+.|..|++.++....+.
T Consensus 18 ~~~~r~~~~~~~p~~~------~~eisk~lg~~Wk~ls~~eK~~y~~~ 59 (77)
T 1hme_A 18 CSEYRPKIKGEHPGLS------IGDVAKKLGEMWNNTAADDKQPYEKK 59 (77)
T ss_dssp HHHHHHHHHHHCTTCC------HHHHHHHHHHHHHHSCGGGSHHHHHH
T ss_pred HHHHHHHHHHHCCCCC------HHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 4556666777788853 45788999999999997665544433
No 51
>1wgf_A Upstream binding factor 1; transcription factor, DNA binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: a.21.1.1
Probab=21.08 E-value=1.2e+02 Score=21.30 Aligned_cols=42 Identities=21% Similarity=0.289 Sum_probs=30.0
Q ss_pred HHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhcCchHHHHhhH
Q 024973 133 KSAYRRLSKEYHPDTTSLPLKAASEKFLKLREVYDVLSNEESRRFYDW 180 (259)
Q Consensus 133 K~AYrkl~~~~HPDk~~~~~~~a~~~f~~I~eAy~vLsdp~~R~~YD~ 180 (259)
...+|..++.-||+.. ..+..+.|.+.|.-|++.++....|.
T Consensus 32 ~~~~r~~~k~~~P~~~------~~eisk~lg~~Wk~ls~eeK~~Y~~~ 73 (90)
T 1wgf_A 32 SEEKRRQLQEERPELS------ESELTRLLARMWNDLSEKKKAKYKAR 73 (90)
T ss_dssp HHHTHHHHHHHCTTSC------HHHHHHHHHHHHHHSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCC------HHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 4556777777889853 45778999999999997655544443
Done!