Query 024975
Match_columns 259
No_of_seqs 164 out of 2102
Neff 11.1
Searched_HMMs 29240
Date Mon Mar 25 17:45:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024975.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024975hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2xve_A Flavin-containing monoo 100.0 1.7E-33 5.7E-38 234.0 25.8 244 1-255 1-252 (464)
2 2gv8_A Monooxygenase; FMO, FAD 100.0 3.2E-32 1.1E-36 225.8 22.2 237 2-255 6-265 (447)
3 3uox_A Otemo; baeyer-villiger 100.0 3E-31 1E-35 223.8 17.5 202 2-230 9-218 (545)
4 4ap3_A Steroid monooxygenase; 100.0 3.1E-31 1.1E-35 223.9 16.9 202 2-230 21-224 (549)
5 3gwf_A Cyclohexanone monooxyge 100.0 2.4E-31 8.1E-36 224.2 16.1 201 3-230 9-211 (540)
6 4a9w_A Monooxygenase; baeyer-v 100.0 2.3E-30 7.7E-35 208.8 19.4 192 2-230 3-195 (357)
7 1w4x_A Phenylacetone monooxyge 100.0 1.8E-29 6.2E-34 213.7 19.5 202 2-230 16-219 (542)
8 3f8d_A Thioredoxin reductase ( 100.0 7.3E-28 2.5E-32 191.6 14.7 199 2-256 15-219 (323)
9 2q7v_A Thioredoxin reductase; 99.9 7.8E-27 2.7E-31 186.0 16.4 202 2-256 8-217 (325)
10 4gcm_A TRXR, thioredoxin reduc 99.9 4.1E-27 1.4E-31 186.5 14.4 173 2-230 6-178 (312)
11 3lzw_A Ferredoxin--NADP reduct 99.9 1.6E-27 5.6E-32 190.3 11.3 205 2-256 7-218 (332)
12 2zbw_A Thioredoxin reductase; 99.9 4E-27 1.4E-31 188.4 12.6 180 2-230 5-185 (335)
13 2q0l_A TRXR, thioredoxin reduc 99.9 5.3E-27 1.8E-31 185.8 12.6 201 2-256 1-208 (311)
14 4b63_A L-ornithine N5 monooxyg 99.9 1.4E-26 4.7E-31 194.0 15.0 211 2-230 39-281 (501)
15 3fbs_A Oxidoreductase; structu 99.9 1.4E-26 4.8E-31 182.1 13.8 196 1-255 1-201 (297)
16 3ab1_A Ferredoxin--NADP reduct 99.9 1.2E-26 4.1E-31 187.4 13.6 207 2-256 14-231 (360)
17 3itj_A Thioredoxin reductase 1 99.9 7E-27 2.4E-31 187.1 10.6 206 1-256 21-238 (338)
18 1fl2_A Alkyl hydroperoxide red 99.9 2.3E-26 7.9E-31 182.1 12.8 201 2-256 1-209 (310)
19 3d1c_A Flavin-containing putat 99.9 2.3E-25 8E-30 180.4 18.9 194 2-230 4-199 (369)
20 3r9u_A Thioredoxin reductase; 99.9 5.2E-26 1.8E-30 180.3 13.0 201 2-256 4-212 (315)
21 3cty_A Thioredoxin reductase; 99.9 1.3E-25 4.5E-30 178.4 13.5 199 2-256 16-219 (319)
22 2a87_A TRXR, TR, thioredoxin r 99.9 6.2E-26 2.1E-30 181.5 11.5 200 2-256 14-220 (335)
23 1hyu_A AHPF, alkyl hydroperoxi 99.9 3.4E-25 1.2E-29 186.6 16.4 201 2-256 212-420 (521)
24 4a5l_A Thioredoxin reductase; 99.9 8.4E-26 2.9E-30 179.1 11.5 181 2-231 4-186 (314)
25 1vdc_A NTR, NADPH dependent th 99.9 1.2E-25 4.1E-30 179.7 12.3 200 3-256 9-224 (333)
26 3s5w_A L-ornithine 5-monooxyge 99.9 5.6E-26 1.9E-30 189.4 10.1 211 3-230 31-262 (463)
27 4fk1_A Putative thioredoxin re 99.9 1.8E-25 6E-30 176.5 11.9 174 2-230 6-180 (304)
28 1trb_A Thioredoxin reductase; 99.9 9.1E-26 3.1E-30 179.4 9.6 200 2-256 5-213 (320)
29 3urh_A Dihydrolipoyl dehydroge 99.9 7.2E-24 2.5E-28 177.7 9.1 201 2-230 25-231 (491)
30 3l8k_A Dihydrolipoyl dehydroge 99.9 5.3E-25 1.8E-29 183.4 2.0 213 3-255 5-239 (466)
31 3oc4_A Oxidoreductase, pyridin 99.9 7.1E-23 2.4E-27 170.0 13.9 198 1-255 1-217 (452)
32 1ebd_A E3BD, dihydrolipoamide 99.9 1.1E-23 3.9E-28 174.9 6.9 196 2-230 3-203 (455)
33 3dgz_A Thioredoxin reductase 2 99.9 8E-24 2.7E-28 177.2 5.6 193 2-230 6-218 (488)
34 1zmd_A Dihydrolipoyl dehydroge 99.9 1.1E-23 3.9E-28 175.8 6.1 200 2-230 6-211 (474)
35 2qae_A Lipoamide, dihydrolipoy 99.9 4.4E-24 1.5E-28 178.0 2.8 202 1-230 1-207 (468)
36 4b1b_A TRXR, thioredoxin reduc 99.9 1.1E-23 3.8E-28 176.8 5.0 199 3-230 43-256 (542)
37 1onf_A GR, grase, glutathione 99.9 1.8E-23 6.2E-28 175.5 5.8 220 1-256 1-246 (500)
38 1dxl_A Dihydrolipoamide dehydr 99.9 5.4E-24 1.8E-28 177.7 2.6 226 2-256 6-247 (470)
39 3qfa_A Thioredoxin reductase 1 99.9 2E-23 6.7E-28 175.9 5.8 193 2-230 32-243 (519)
40 3dgh_A TRXR-1, thioredoxin red 99.9 2.1E-23 7.2E-28 174.5 5.5 217 2-255 9-255 (483)
41 1ojt_A Surface protein; redox- 99.9 4.5E-23 1.5E-27 172.4 7.4 199 2-230 6-218 (482)
42 1v59_A Dihydrolipoamide dehydr 99.9 3.7E-23 1.3E-27 173.0 6.5 199 2-230 5-216 (478)
43 3dk9_A Grase, GR, glutathione 99.9 3.5E-23 1.2E-27 173.0 6.2 187 2-230 20-220 (478)
44 3kd9_A Coenzyme A disulfide re 99.9 8E-23 2.7E-27 169.6 7.1 195 2-256 3-218 (449)
45 3ic9_A Dihydrolipoamide dehydr 99.9 1.1E-23 3.8E-28 176.3 1.6 213 3-256 9-243 (492)
46 3ntd_A FAD-dependent pyridine 99.9 9.1E-23 3.1E-27 174.0 6.8 200 2-255 1-220 (565)
47 2yqu_A 2-oxoglutarate dehydrog 99.9 4.7E-23 1.6E-27 171.2 4.8 195 2-230 1-200 (455)
48 3klj_A NAD(FAD)-dependent dehy 99.9 5.4E-23 1.9E-27 166.8 5.0 166 2-230 9-179 (385)
49 2a8x_A Dihydrolipoyl dehydroge 99.9 5.9E-23 2E-27 171.0 4.8 197 2-230 3-204 (464)
50 1xdi_A RV3303C-LPDA; reductase 99.9 2.2E-22 7.6E-27 168.9 8.3 223 1-256 1-252 (499)
51 4dna_A Probable glutathione re 99.9 5.2E-23 1.8E-27 171.3 4.4 222 2-256 5-240 (463)
52 2bc0_A NADH oxidase; flavoprot 99.9 1.6E-22 5.3E-27 169.5 7.3 174 2-230 35-227 (490)
53 2eq6_A Pyruvate dehydrogenase 99.9 1.1E-22 3.7E-27 169.3 6.1 190 3-230 7-202 (464)
54 3lad_A Dihydrolipoamide dehydr 99.9 1.7E-22 5.9E-27 168.8 7.1 227 1-256 2-250 (476)
55 2wpf_A Trypanothione reductase 99.9 5.6E-23 1.9E-27 172.2 4.0 218 2-256 7-264 (495)
56 3ics_A Coenzyme A-disulfide re 99.9 2.9E-22 1E-26 171.5 8.0 202 1-255 35-256 (588)
57 1mo9_A ORF3; nucleotide bindin 99.9 1.6E-21 5.6E-26 164.4 12.4 216 2-255 43-283 (523)
58 1zk7_A HGII, reductase, mercur 99.9 2.3E-22 7.7E-27 167.7 6.6 196 2-230 4-209 (467)
59 2r9z_A Glutathione amide reduc 99.9 8E-23 2.7E-27 170.0 3.6 184 2-230 4-199 (463)
60 3iwa_A FAD-dependent pyridine 99.9 4.9E-22 1.7E-26 165.9 7.4 181 2-230 3-193 (472)
61 2hqm_A GR, grase, glutathione 99.9 1.6E-22 5.5E-27 168.9 4.0 197 2-230 11-218 (479)
62 3ef6_A Toluene 1,2-dioxygenase 99.9 1.6E-22 5.6E-27 165.7 3.9 169 1-230 1-176 (410)
63 1fec_A Trypanothione reductase 99.9 5.5E-23 1.9E-27 172.1 0.8 224 2-256 3-260 (490)
64 3o0h_A Glutathione reductase; 99.9 2E-22 6.8E-27 168.6 3.9 188 3-230 27-224 (484)
65 1ges_A Glutathione reductase; 99.9 9.2E-23 3.2E-27 169.1 1.9 194 2-230 4-200 (450)
66 2cdu_A NADPH oxidase; flavoenz 99.8 2.4E-21 8.1E-26 160.9 9.3 200 3-255 1-219 (452)
67 4eqs_A Coenzyme A disulfide re 99.8 1.1E-21 3.8E-26 161.8 7.2 201 3-256 1-217 (437)
68 1xhc_A NADH oxidase /nitrite r 99.8 4.8E-22 1.7E-26 160.5 4.4 163 3-230 9-176 (367)
69 1lvl_A Dihydrolipoamide dehydr 99.8 1.8E-21 6E-26 161.8 7.2 187 2-230 5-204 (458)
70 3lxd_A FAD-dependent pyridine 99.8 1.2E-21 4E-26 161.1 5.9 195 2-256 9-223 (415)
71 1nhp_A NADH peroxidase; oxidor 99.8 3.4E-21 1.2E-25 159.7 7.8 172 3-230 1-182 (447)
72 2x8g_A Thioredoxin glutathione 99.8 1.7E-21 5.9E-26 167.0 5.5 194 2-230 107-319 (598)
73 2gqw_A Ferredoxin reductase; f 99.8 1.2E-20 4.3E-25 154.4 10.2 164 2-230 7-178 (408)
74 3cgb_A Pyridine nucleotide-dis 99.8 3.8E-21 1.3E-25 160.6 6.9 174 2-230 36-219 (480)
75 1lqt_A FPRA; NADP+ derivative, 99.8 4.9E-21 1.7E-25 158.5 7.5 160 2-230 3-201 (456)
76 2vdc_G Glutamate synthase [NAD 99.8 6.3E-21 2.2E-25 157.7 7.6 160 2-231 122-299 (456)
77 3fg2_P Putative rubredoxin red 99.8 4.3E-21 1.5E-25 157.1 5.2 168 2-230 1-175 (404)
78 1q1r_A Putidaredoxin reductase 99.8 1E-20 3.4E-25 156.0 6.4 170 2-230 4-182 (431)
79 2v3a_A Rubredoxin reductase; a 99.8 1.9E-20 6.4E-25 152.3 7.9 167 2-230 4-178 (384)
80 1o94_A Tmadh, trimethylamine d 99.8 2.3E-20 7.7E-25 162.9 8.0 167 2-230 389-563 (729)
81 3k30_A Histamine dehydrogenase 99.8 8.8E-21 3E-25 164.8 5.2 159 2-230 391-558 (690)
82 1cjc_A Protein (adrenodoxin re 99.8 2.7E-20 9.1E-25 154.3 7.5 160 2-231 6-200 (460)
83 2gag_A Heterotetrameric sarcos 99.8 1.8E-19 6.2E-24 161.3 12.5 200 2-255 128-344 (965)
84 1ps9_A 2,4-dienoyl-COA reducta 99.8 2E-19 6.9E-24 155.9 10.7 145 2-221 373-518 (671)
85 3sx6_A Sulfide-quinone reducta 99.8 5.5E-20 1.9E-24 152.0 2.8 168 2-230 4-197 (437)
86 1gte_A Dihydropyrimidine dehyd 99.8 3.3E-19 1.1E-23 160.6 4.6 162 2-230 187-366 (1025)
87 2gqf_A Hypothetical protein HI 99.8 4E-19 1.4E-23 144.8 4.6 154 3-169 5-171 (401)
88 3h8l_A NADH oxidase; membrane 99.7 1.1E-18 3.8E-23 143.1 4.8 195 2-256 1-247 (409)
89 1m6i_A Programmed cell death p 99.7 1.2E-19 4.1E-24 151.9 -3.3 194 2-230 11-217 (493)
90 4g6h_A Rotenone-insensitive NA 99.7 1.8E-18 6E-23 144.8 1.3 199 2-256 42-301 (502)
91 1y56_A Hypothetical protein PH 99.7 9.5E-17 3.2E-21 134.4 9.7 160 3-221 109-272 (493)
92 3v76_A Flavoprotein; structura 99.7 6E-17 2.1E-21 132.4 7.3 156 2-170 27-191 (417)
93 3h28_A Sulfide-quinone reducta 99.6 2.6E-18 8.8E-23 141.8 -4.3 165 1-230 1-189 (430)
94 2i0z_A NAD(FAD)-utilizing dehy 99.6 4.1E-16 1.4E-20 129.1 6.5 157 1-168 25-193 (447)
95 3oz2_A Digeranylgeranylglycero 99.6 1.5E-14 5.1E-19 117.8 15.1 155 2-167 4-163 (397)
96 2qa1_A PGAE, polyketide oxygen 99.6 1.4E-14 4.8E-19 121.4 14.0 153 1-168 10-167 (500)
97 2qa2_A CABE, polyketide oxygen 99.6 1.9E-14 6.5E-19 120.6 13.7 153 1-168 11-168 (499)
98 3nix_A Flavoprotein/dehydrogen 99.6 3.5E-15 1.2E-19 122.7 8.7 151 3-166 6-166 (421)
99 3qj4_A Renalase; FAD/NAD(P)-bi 99.6 1.9E-15 6.4E-20 121.0 6.7 151 2-164 1-163 (342)
100 3cgv_A Geranylgeranyl reductas 99.6 2.1E-14 7.2E-19 117.1 11.9 155 2-166 4-162 (397)
101 3fmw_A Oxygenase; mithramycin, 99.6 3.8E-14 1.3E-18 120.4 13.8 155 2-168 49-209 (570)
102 3ihg_A RDME; flavoenzyme, anth 99.6 5.3E-14 1.8E-18 119.1 14.3 162 2-167 5-184 (535)
103 2ywl_A Thioredoxin reductase r 99.6 2E-14 6.8E-19 104.4 10.1 114 2-172 1-114 (180)
104 3ces_A MNMG, tRNA uridine 5-ca 99.6 6.3E-15 2.1E-19 125.0 8.4 184 2-229 28-222 (651)
105 3fpz_A Thiazole biosynthetic e 99.6 3.1E-16 1.1E-20 124.7 -0.1 158 2-238 65-224 (326)
106 2bry_A NEDD9 interacting prote 99.5 1.4E-14 4.6E-19 121.4 9.4 139 2-169 92-233 (497)
107 1yvv_A Amine oxidase, flavin-c 99.5 8.9E-15 3E-19 116.7 7.6 156 1-169 1-165 (336)
108 2cul_A Glucose-inhibited divis 99.5 8.7E-14 3E-18 105.1 12.2 125 2-169 3-128 (232)
109 3nlc_A Uncharacterized protein 99.5 1.9E-14 6.5E-19 120.9 8.8 156 2-166 107-277 (549)
110 3rp8_A Flavoprotein monooxygen 99.5 1.6E-14 5.5E-19 118.3 7.9 157 2-169 23-184 (407)
111 3e1t_A Halogenase; flavoprotei 99.5 1.5E-13 5E-18 115.8 12.5 152 3-168 8-174 (512)
112 2vou_A 2,6-dihydroxypyridine h 99.5 1.4E-13 4.8E-18 112.3 11.4 143 2-167 5-154 (397)
113 3hyw_A Sulfide-quinone reducta 99.5 2.9E-16 9.8E-21 129.4 -4.6 36 1-36 1-38 (430)
114 1rp0_A ARA6, thiazole biosynth 99.5 2E-13 6.8E-18 106.3 11.4 141 2-166 39-191 (284)
115 3i3l_A Alkylhalidase CMLS; fla 99.5 1.3E-13 4.3E-18 117.5 11.0 153 2-166 23-188 (591)
116 3dme_A Conserved exported prot 99.5 8.1E-14 2.8E-18 112.4 9.3 63 102-168 149-211 (369)
117 2uzz_A N-methyl-L-tryptophan o 99.5 1.8E-13 6.3E-18 110.6 11.4 61 103-171 149-209 (372)
118 1y0p_A Fumarate reductase flav 99.5 6.4E-14 2.2E-18 119.5 8.9 164 2-167 126-318 (571)
119 1k0i_A P-hydroxybenzoate hydro 99.5 1.1E-13 3.7E-18 112.9 9.8 157 1-169 1-166 (394)
120 3vrd_B FCCB subunit, flavocyto 99.5 1.4E-13 4.9E-18 112.4 10.3 115 2-178 2-118 (401)
121 2gmh_A Electron transfer flavo 99.5 5.6E-13 1.9E-17 113.7 14.2 156 2-167 35-218 (584)
122 3atr_A Conserved archaeal prot 99.5 1.6E-13 5.5E-18 113.9 10.2 153 2-168 6-164 (453)
123 3ps9_A TRNA 5-methylaminomethy 99.5 2.1E-13 7.3E-18 118.5 11.4 58 103-167 417-474 (676)
124 2x3n_A Probable FAD-dependent 99.5 4.1E-13 1.4E-17 109.7 12.5 153 3-167 7-167 (399)
125 1qo8_A Flavocytochrome C3 fuma 99.5 1.1E-13 3.9E-18 117.8 9.4 164 2-167 121-313 (566)
126 2xdo_A TETX2 protein; tetracyc 99.5 7.5E-14 2.5E-18 114.0 7.8 146 2-169 26-185 (398)
127 2zxi_A TRNA uridine 5-carboxym 99.5 4.2E-14 1.4E-18 119.5 5.0 185 2-230 27-222 (637)
128 3alj_A 2-methyl-3-hydroxypyrid 99.4 1E-12 3.5E-17 106.6 12.2 146 2-167 11-161 (379)
129 3dje_A Fructosyl amine: oxygen 99.4 5E-13 1.7E-17 110.4 9.9 61 103-170 161-225 (438)
130 4at0_A 3-ketosteroid-delta4-5a 99.4 9.2E-13 3.2E-17 110.8 11.5 60 104-166 203-264 (510)
131 3da1_A Glycerol-3-phosphate de 99.4 1.9E-12 6.4E-17 110.0 13.1 63 102-166 169-232 (561)
132 1ryi_A Glycine oxidase; flavop 99.4 7.1E-13 2.4E-17 107.5 9.7 59 101-167 162-220 (382)
133 2r0c_A REBC; flavin adenine di 99.4 4E-12 1.4E-16 107.8 14.4 160 3-168 27-198 (549)
134 3c96_A Flavin-containing monoo 99.4 6.6E-13 2.3E-17 108.8 9.3 159 2-169 4-172 (410)
135 2gf3_A MSOX, monomeric sarcosi 99.4 1.4E-13 4.7E-18 112.0 5.2 57 103-167 150-206 (389)
136 3pvc_A TRNA 5-methylaminomethy 99.4 1.4E-12 4.7E-17 113.6 11.6 59 103-167 412-470 (689)
137 3jsk_A Cypbp37 protein; octame 99.4 2.1E-12 7.2E-17 101.8 11.5 142 2-167 79-252 (344)
138 3nyc_A D-arginine dehydrogenas 99.4 6.4E-13 2.2E-17 107.7 8.7 58 102-167 153-210 (381)
139 4hb9_A Similarities with proba 99.4 2E-12 6.8E-17 105.8 11.3 152 3-169 2-169 (412)
140 1d4d_A Flavocytochrome C fumar 99.4 5.9E-12 2E-16 107.2 13.7 162 3-167 127-318 (572)
141 2e5v_A L-aspartate oxidase; ar 99.4 3.2E-13 1.1E-17 112.4 5.8 215 4-230 1-242 (472)
142 2dkh_A 3-hydroxybenzoate hydro 99.4 3.3E-12 1.1E-16 110.1 12.1 160 3-168 33-213 (639)
143 1y56_B Sarcosine oxidase; dehy 99.4 3.4E-12 1.2E-16 103.5 11.2 57 102-166 148-205 (382)
144 2gag_B Heterotetrameric sarcos 99.4 5.6E-13 1.9E-17 109.0 6.1 57 103-166 174-230 (405)
145 1pn0_A Phenol 2-monooxygenase; 99.4 6.6E-12 2.3E-16 108.6 12.5 163 2-169 8-233 (665)
146 3cp8_A TRNA uridine 5-carboxym 99.4 7.9E-13 2.7E-17 112.2 6.6 184 2-229 21-216 (641)
147 2qcu_A Aerobic glycerol-3-phos 99.4 7.2E-12 2.5E-16 105.2 12.4 63 102-167 148-211 (501)
148 2wdq_A Succinate dehydrogenase 99.4 7.1E-12 2.4E-16 106.9 12.3 63 103-167 143-207 (588)
149 2oln_A NIKD protein; flavoprot 99.3 3.3E-12 1.1E-16 104.2 9.5 56 103-166 153-208 (397)
150 2h88_A Succinate dehydrogenase 99.3 7.5E-12 2.6E-16 107.0 11.3 64 103-168 155-219 (621)
151 2gjc_A Thiazole biosynthetic e 99.3 8.8E-12 3E-16 97.7 10.4 140 3-166 66-239 (326)
152 2bs2_A Quinol-fumarate reducta 99.3 1.8E-11 6E-16 105.4 12.2 63 103-167 158-221 (660)
153 3k7m_X 6-hydroxy-L-nicotine ox 99.3 5.1E-12 1.7E-16 104.2 8.0 42 2-43 1-42 (431)
154 1kf6_A Fumarate reductase flav 99.3 1.9E-11 6.6E-16 104.4 11.2 65 103-169 134-200 (602)
155 2aqj_A Tryptophan halogenase, 99.3 1.2E-11 4E-16 104.8 9.7 62 100-168 162-224 (538)
156 3c4a_A Probable tryptophan hyd 99.3 2.5E-12 8.6E-17 104.3 5.2 136 3-167 1-144 (381)
157 3kkj_A Amine oxidase, flavin-c 99.3 2.5E-12 8.6E-17 99.8 5.1 42 1-42 1-42 (336)
158 2weu_A Tryptophan 5-halogenase 99.3 1.1E-11 3.8E-16 104.4 9.0 62 100-168 170-232 (511)
159 4dgk_A Phytoene dehydrogenase; 99.3 9.5E-12 3.2E-16 104.5 8.2 41 2-42 1-41 (501)
160 1chu_A Protein (L-aspartate ox 99.3 5.9E-12 2E-16 106.3 6.7 162 3-167 9-209 (540)
161 2rgh_A Alpha-glycerophosphate 99.3 4.1E-11 1.4E-15 101.9 11.7 63 103-167 188-251 (571)
162 3nks_A Protoporphyrinogen oxid 99.3 1.5E-11 5.2E-16 102.6 8.8 43 1-43 1-45 (477)
163 3i6d_A Protoporphyrinogen oxid 99.2 9.4E-12 3.2E-16 103.6 7.3 42 2-43 5-52 (470)
164 2e4g_A Tryptophan halogenase; 99.2 4.4E-11 1.5E-15 101.5 10.6 62 100-168 191-254 (550)
165 3c4n_A Uncharacterized protein 99.2 2.7E-12 9.3E-17 104.9 2.6 56 103-166 172-236 (405)
166 1pj5_A N,N-dimethylglycine oxi 99.2 5.8E-11 2E-15 105.5 10.4 58 102-166 150-207 (830)
167 1jnr_A Adenylylsulfate reducta 99.2 3.7E-10 1.3E-14 97.4 14.9 67 103-171 151-223 (643)
168 3axb_A Putative oxidoreductase 99.2 1.4E-11 4.9E-16 102.0 5.7 59 102-167 180-255 (448)
169 1s3e_A Amine oxidase [flavin-c 99.2 5.7E-11 1.9E-15 100.3 8.6 42 2-43 4-45 (520)
170 2pyx_A Tryptophan halogenase; 99.2 1.4E-10 5E-15 97.9 10.7 62 100-168 172-235 (526)
171 2yqu_A 2-oxoglutarate dehydrog 99.1 4.3E-10 1.5E-14 93.3 12.3 100 2-170 167-266 (455)
172 3gyx_A Adenylylsulfate reducta 99.1 1.5E-10 5E-15 99.7 9.3 64 103-168 166-235 (662)
173 2v3a_A Rubredoxin reductase; a 99.1 5.2E-10 1.8E-14 90.8 11.7 97 2-164 145-241 (384)
174 2eq6_A Pyruvate dehydrogenase 99.1 1.1E-09 3.8E-14 91.0 13.6 105 2-171 169-274 (464)
175 1ges_A Glutathione reductase; 99.1 9.2E-10 3.1E-14 91.2 12.5 101 2-170 167-267 (450)
176 1ebd_A E3BD, dihydrolipoamide 99.1 2.1E-09 7.1E-14 89.2 13.3 103 2-170 170-272 (455)
177 2ivd_A PPO, PPOX, protoporphyr 99.1 8.2E-11 2.8E-15 98.3 4.6 41 2-42 16-56 (478)
178 1nhp_A NADH peroxidase; oxidor 99.0 1.2E-09 4E-14 90.5 10.8 101 2-171 149-249 (447)
179 1v59_A Dihydrolipoamide dehydr 99.0 2.6E-09 8.9E-14 89.2 12.8 106 2-171 183-290 (478)
180 1onf_A GR, grase, glutathione 99.0 3.7E-09 1.3E-13 88.7 13.1 101 3-170 177-277 (500)
181 3ic9_A Dihydrolipoamide dehydr 99.0 6.6E-09 2.3E-13 87.0 14.4 104 2-171 174-277 (492)
182 3lxd_A FAD-dependent pyridine 99.0 3.7E-09 1.3E-13 86.7 12.4 101 2-169 152-252 (415)
183 2qae_A Lipoamide, dihydrolipoy 99.0 7.1E-09 2.4E-13 86.3 13.9 104 2-170 174-278 (468)
184 3urh_A Dihydrolipoyl dehydroge 99.0 8E-09 2.7E-13 86.5 14.3 105 2-171 198-303 (491)
185 4gut_A Lysine-specific histone 99.0 1.3E-09 4.3E-14 95.5 9.5 40 2-41 336-375 (776)
186 2r9z_A Glutathione amide reduc 99.0 4.8E-09 1.7E-13 87.1 12.5 101 2-170 166-266 (463)
187 1fec_A Trypanothione reductase 99.0 4.5E-09 1.5E-13 87.9 12.3 101 2-170 187-290 (490)
188 3ef6_A Toluene 1,2-dioxygenase 99.0 2.3E-09 7.9E-14 87.7 10.3 97 2-164 143-239 (410)
189 3g3e_A D-amino-acid oxidase; F 99.0 7.1E-11 2.4E-15 94.7 1.2 35 3-37 1-41 (351)
190 3fg2_P Putative rubredoxin red 99.0 3.2E-09 1.1E-13 86.7 11.0 97 3-164 143-239 (404)
191 2wpf_A Trypanothione reductase 99.0 5.2E-09 1.8E-13 87.7 12.3 101 2-170 191-294 (495)
192 3lad_A Dihydrolipoamide dehydr 99.0 1E-08 3.4E-13 85.6 13.7 103 2-170 180-282 (476)
193 1dxl_A Dihydrolipoamide dehydr 99.0 5.2E-09 1.8E-13 87.2 11.9 104 2-170 177-281 (470)
194 1ojt_A Surface protein; redox- 99.0 3E-09 1E-13 88.9 10.3 104 2-170 185-288 (482)
195 1zmd_A Dihydrolipoyl dehydroge 99.0 1.4E-08 4.8E-13 84.7 14.3 106 2-170 178-284 (474)
196 2a8x_A Dihydrolipoyl dehydroge 99.0 8.7E-09 3E-13 85.7 12.9 102 2-170 171-273 (464)
197 1q1r_A Putidaredoxin reductase 99.0 5.4E-09 1.8E-13 86.1 11.4 98 2-164 149-248 (431)
198 2hqm_A GR, grase, glutathione 99.0 5.3E-09 1.8E-13 87.3 11.5 102 2-170 185-287 (479)
199 4gde_A UDP-galactopyranose mut 99.0 3.4E-10 1.2E-14 95.3 4.1 41 2-42 10-51 (513)
200 1lvl_A Dihydrolipoamide dehydr 99.0 2.3E-09 8E-14 88.9 9.0 101 2-171 171-271 (458)
201 2gqw_A Ferredoxin reductase; f 98.9 7.4E-09 2.5E-13 84.7 11.4 93 2-164 145-237 (408)
202 1xdi_A RV3303C-LPDA; reductase 98.9 9.1E-09 3.1E-13 86.3 12.0 100 2-170 182-281 (499)
203 3oc4_A Oxidoreductase, pyridin 98.9 1.9E-08 6.5E-13 83.4 13.7 101 2-171 147-247 (452)
204 3o0h_A Glutathione reductase; 98.9 1.1E-08 3.8E-13 85.5 12.2 100 2-170 191-290 (484)
205 3iwa_A FAD-dependent pyridine 98.9 1.3E-08 4.5E-13 84.8 12.5 97 2-164 159-256 (472)
206 1zk7_A HGII, reductase, mercur 98.9 1.6E-08 5.3E-13 84.2 12.6 97 2-169 176-272 (467)
207 4b1b_A TRXR, thioredoxin reduc 98.9 1.7E-08 5.7E-13 85.1 12.7 99 2-170 223-321 (542)
208 3cgb_A Pyridine nucleotide-dis 98.9 9.2E-09 3.2E-13 85.9 11.0 95 2-164 186-280 (480)
209 1mo9_A ORF3; nucleotide bindin 98.9 1.3E-08 4.6E-13 85.8 11.6 101 3-170 215-318 (523)
210 3dgh_A TRXR-1, thioredoxin red 98.9 4.5E-08 1.5E-12 81.8 14.7 104 2-170 187-291 (483)
211 2cdu_A NADPH oxidase; flavoenz 98.9 1.5E-08 5.3E-13 83.9 11.6 100 2-170 149-249 (452)
212 2bc0_A NADH oxidase; flavoprot 98.9 1.4E-08 4.8E-13 85.0 11.4 100 2-170 194-293 (490)
213 3ntd_A FAD-dependent pyridine 98.9 2E-08 6.8E-13 85.6 12.5 96 3-164 152-265 (565)
214 3dk9_A Grase, GR, glutathione 98.9 4E-08 1.4E-12 82.0 13.6 106 2-171 187-296 (478)
215 3pl8_A Pyranose 2-oxidase; sub 98.9 2.8E-08 9.4E-13 85.4 12.9 40 2-41 46-85 (623)
216 3s5w_A L-ornithine 5-monooxyge 98.9 1.6E-08 5.6E-13 84.0 11.0 87 116-207 329-419 (463)
217 3dgz_A Thioredoxin reductase 2 98.8 9.6E-08 3.3E-12 79.9 15.1 104 2-170 185-289 (488)
218 1m6i_A Programmed cell death p 98.8 2.8E-08 9.6E-13 83.2 11.2 101 2-170 180-284 (493)
219 4dna_A Probable glutathione re 98.8 4.4E-08 1.5E-12 81.4 11.6 100 2-170 170-270 (463)
220 2bcg_G Secretory pathway GDP d 98.8 4.8E-09 1.6E-13 86.9 5.1 42 2-43 11-52 (453)
221 2e1m_A L-glutamate oxidase; L- 98.8 4.9E-09 1.7E-13 84.1 4.9 43 2-44 44-87 (376)
222 1trb_A Thioredoxin reductase; 98.8 1.2E-07 4.1E-12 74.7 12.6 101 3-169 146-248 (320)
223 4eqs_A Coenzyme A disulfide re 98.8 3E-08 1E-12 81.8 9.2 95 2-169 147-241 (437)
224 2b9w_A Putative aminooxidase; 98.8 6.5E-09 2.2E-13 85.4 5.2 42 2-43 6-48 (424)
225 3nrn_A Uncharacterized protein 98.8 6.2E-09 2.1E-13 85.5 5.0 40 3-42 1-40 (421)
226 1rsg_A FMS1 protein; FAD bindi 98.8 4.3E-09 1.5E-13 88.7 4.0 41 3-43 9-50 (516)
227 3hdq_A UDP-galactopyranose mut 98.8 7.1E-09 2.4E-13 83.9 5.1 42 2-43 29-70 (397)
228 3ka7_A Oxidoreductase; structu 98.7 6E-09 2.1E-13 85.6 4.7 40 3-42 1-40 (425)
229 1v0j_A UDP-galactopyranose mut 98.7 8.3E-09 2.8E-13 84.1 5.1 42 2-43 7-49 (399)
230 3qfa_A Thioredoxin reductase 1 98.7 2.4E-07 8.2E-12 78.1 14.1 104 2-170 210-317 (519)
231 1xhc_A NADH oxidase /nitrite r 98.7 4.4E-08 1.5E-12 78.9 9.1 92 3-169 144-235 (367)
232 3ics_A Coenzyme A-disulfide re 98.7 7.1E-08 2.4E-12 82.6 10.7 94 2-164 187-280 (588)
233 3l8k_A Dihydrolipoyl dehydroge 98.7 1E-07 3.5E-12 79.3 11.3 104 2-171 172-275 (466)
234 3q9t_A Choline dehydrogenase a 98.7 1.2E-08 4.2E-13 86.6 5.6 35 2-36 6-41 (577)
235 3qvp_A Glucose oxidase; oxidor 98.7 9.1E-09 3.1E-13 87.3 4.6 70 105-176 229-303 (583)
236 2jae_A L-amino acid oxidase; o 98.7 1.4E-08 4.7E-13 85.1 5.4 40 2-41 11-50 (489)
237 2zbw_A Thioredoxin reductase; 98.7 3.6E-07 1.2E-11 72.5 13.3 102 2-170 152-254 (335)
238 1i8t_A UDP-galactopyranose mut 98.7 1.4E-08 4.6E-13 81.9 4.7 41 2-42 1-41 (367)
239 2x8g_A Thioredoxin glutathione 98.7 4.6E-07 1.6E-11 77.7 14.3 103 3-170 287-397 (598)
240 4g6h_A Rotenone-insensitive NA 98.7 5.9E-08 2E-12 81.3 8.5 96 4-164 219-330 (502)
241 2yg5_A Putrescine oxidase; oxi 98.7 1.2E-08 4.1E-13 84.6 4.2 41 2-42 5-45 (453)
242 3ab1_A Ferredoxin--NADP reduct 98.7 2.2E-07 7.4E-12 74.6 11.5 98 3-164 164-261 (360)
243 3kd9_A Coenzyme A disulfide re 98.7 1.3E-07 4.6E-12 78.2 10.2 94 3-164 149-242 (449)
244 3d1c_A Flavin-containing putat 98.6 2.3E-07 8E-12 74.6 11.0 107 3-170 167-274 (369)
245 1sez_A Protoporphyrinogen oxid 98.6 2.1E-08 7.3E-13 84.2 4.9 40 2-41 13-52 (504)
246 3lov_A Protoporphyrinogen oxid 98.6 2.1E-08 7E-13 83.7 4.7 41 2-42 4-46 (475)
247 3t37_A Probable dehydrogenase; 98.6 1.8E-08 6E-13 85.2 4.3 35 2-36 17-52 (526)
248 3itj_A Thioredoxin reductase 1 98.6 2.6E-07 8.9E-12 73.3 10.9 94 3-164 174-269 (338)
249 4dsg_A UDP-galactopyranose mut 98.6 3.2E-08 1.1E-12 82.6 5.6 42 2-43 9-51 (484)
250 2bi7_A UDP-galactopyranose mut 98.6 3E-08 1E-12 80.3 5.2 42 2-43 3-44 (384)
251 2vvm_A Monoamine oxidase N; FA 98.6 2.5E-08 8.4E-13 83.7 4.7 40 3-42 40-79 (495)
252 3ihm_A Styrene monooxygenase A 98.6 2.5E-08 8.6E-13 82.1 4.6 35 1-35 21-55 (430)
253 3r9u_A Thioredoxin reductase; 98.6 1.8E-07 6.3E-12 73.4 9.1 95 3-164 148-242 (315)
254 2q7v_A Thioredoxin reductase; 98.6 2.8E-07 9.7E-12 72.8 10.1 97 3-169 153-250 (325)
255 2q0l_A TRXR, thioredoxin reduc 98.6 3.1E-07 1E-11 72.1 10.0 99 3-170 144-243 (311)
256 1vdc_A NTR, NADPH dependent th 98.6 3.6E-07 1.2E-11 72.5 10.2 99 3-170 160-261 (333)
257 1fl2_A Alkyl hydroperoxide red 98.6 5.6E-07 1.9E-11 70.6 10.7 94 3-164 145-240 (310)
258 3f8d_A Thioredoxin reductase ( 98.6 6.3E-07 2.1E-11 70.6 11.0 97 3-169 155-252 (323)
259 1c0p_A D-amino acid oxidase; a 98.6 8.4E-08 2.9E-12 77.1 5.9 34 2-35 6-39 (363)
260 2iid_A L-amino-acid oxidase; f 98.5 5.3E-08 1.8E-12 81.7 4.7 40 2-41 33-72 (498)
261 1d5t_A Guanine nucleotide diss 98.5 6.5E-08 2.2E-12 79.7 4.9 43 2-44 6-48 (433)
262 3cty_A Thioredoxin reductase; 98.5 6.6E-07 2.3E-11 70.5 10.2 94 3-164 156-250 (319)
263 3klj_A NAD(FAD)-dependent dehy 98.5 7.4E-08 2.5E-12 78.0 4.7 86 3-169 147-232 (385)
264 3p1w_A Rabgdi protein; GDI RAB 98.5 8.7E-08 3E-12 79.1 4.7 42 2-43 20-61 (475)
265 2a87_A TRXR, TR, thioredoxin r 98.5 4E-07 1.4E-11 72.3 7.8 99 2-170 155-254 (335)
266 3lzw_A Ferredoxin--NADP reduct 98.5 1.2E-06 4E-11 69.3 10.4 93 3-164 155-248 (332)
267 1b37_A Protein (polyamine oxid 98.4 1.5E-07 5E-12 78.5 4.7 41 2-42 4-45 (472)
268 2z3y_A Lysine-specific histone 98.4 2.4E-07 8.3E-12 80.3 5.0 40 2-41 107-146 (662)
269 3g5s_A Methylenetetrahydrofola 98.4 3.8E-07 1.3E-11 72.8 5.5 37 2-38 1-37 (443)
270 4a5l_A Thioredoxin reductase; 98.4 2.8E-06 9.6E-11 66.7 10.4 33 3-35 153-185 (314)
271 2xag_A Lysine-specific histone 98.4 3E-07 1E-11 81.3 5.3 40 2-41 278-317 (852)
272 3fbs_A Oxidoreductase; structu 98.3 7.8E-07 2.7E-11 69.2 6.4 84 2-164 141-224 (297)
273 3k30_A Histamine dehydrogenase 98.3 6.6E-06 2.3E-10 71.7 12.1 97 3-164 524-622 (690)
274 1hyu_A AHPF, alkyl hydroperoxi 98.3 3.9E-06 1.3E-10 70.7 10.3 94 3-164 356-451 (521)
275 3ayj_A Pro-enzyme of L-phenyla 98.1 1.1E-06 3.8E-11 75.9 3.2 35 3-37 57-100 (721)
276 4gcm_A TRXR, thioredoxin reduc 98.1 3.3E-05 1.1E-09 60.5 11.5 34 3-36 146-179 (312)
277 1kdg_A CDH, cellobiose dehydro 98.1 2.9E-06 1E-10 71.9 5.1 35 2-36 7-41 (546)
278 2gag_A Heterotetrameric sarcos 98.1 2.4E-05 8.1E-10 70.7 10.5 94 3-169 285-384 (965)
279 3sx6_A Sulfide-quinone reducta 98.0 5.5E-05 1.9E-09 62.3 10.9 55 105-164 210-267 (437)
280 1o94_A Tmadh, trimethylamine d 98.0 6.2E-06 2.1E-10 72.3 5.4 33 3-35 529-563 (729)
281 1ps9_A 2,4-dienoyl-COA reducta 98.0 2.7E-05 9.1E-10 67.7 9.0 55 105-169 575-629 (671)
282 1lqt_A FPRA; NADP+ derivative, 98.0 4.2E-05 1.4E-09 63.3 9.6 34 3-36 148-202 (456)
283 1vg0_A RAB proteins geranylger 98.0 7.4E-06 2.5E-10 69.9 5.1 41 1-41 7-47 (650)
284 1ju2_A HydroxynitrIle lyase; f 98.0 4E-06 1.4E-10 70.8 3.5 35 2-37 26-60 (536)
285 2xve_A Flavin-containing monoo 97.9 3.8E-05 1.3E-09 63.7 9.0 34 2-35 197-230 (464)
286 1cjc_A Protein (adrenodoxin re 97.9 6.8E-05 2.3E-09 62.1 10.5 34 3-36 146-200 (460)
287 2vdc_G Glutamate synthase [NAD 97.9 2.3E-05 7.8E-10 64.9 7.5 33 3-35 265-298 (456)
288 3gwf_A Cyclohexanone monooxyge 97.9 1.9E-05 6.6E-10 66.7 6.8 35 2-36 178-212 (540)
289 1n4w_A CHOD, cholesterol oxida 97.9 1.4E-05 4.7E-10 67.1 5.3 37 2-38 5-41 (504)
290 3fim_B ARYL-alcohol oxidase; A 97.9 5.7E-06 2E-10 70.2 2.9 37 1-37 1-38 (566)
291 3h28_A Sulfide-quinone reducta 97.9 5.5E-05 1.9E-09 62.2 8.5 54 105-165 202-255 (430)
292 1gte_A Dihydropyrimidine dehyd 97.8 0.00014 4.7E-09 66.2 11.3 33 3-35 333-366 (1025)
293 1coy_A Cholesterol oxidase; ox 97.8 1.9E-05 6.6E-10 66.2 4.9 35 2-36 11-45 (507)
294 2jbv_A Choline oxidase; alcoho 97.7 1.9E-05 6.7E-10 66.8 4.2 36 2-37 13-49 (546)
295 1gpe_A Protein (glucose oxidas 97.7 2.8E-05 9.5E-10 66.4 4.8 36 2-37 24-60 (587)
296 2gv8_A Monooxygenase; FMO, FAD 97.7 9.9E-05 3.4E-09 60.9 8.0 33 3-35 213-246 (447)
297 3h8l_A NADH oxidase; membrane 97.7 0.00021 7.3E-09 58.2 9.1 52 103-165 218-269 (409)
298 4a9w_A Monooxygenase; baeyer-v 97.7 6E-05 2E-09 60.0 5.8 31 3-34 164-194 (357)
299 3llv_A Exopolyphosphatase-rela 97.4 0.00024 8.1E-09 48.6 5.0 34 2-35 6-39 (141)
300 3fwz_A Inner membrane protein 97.4 0.00027 9.3E-09 48.3 5.3 34 2-35 7-40 (140)
301 3ic5_A Putative saccharopine d 97.4 0.00023 7.8E-09 46.9 4.5 35 1-35 4-39 (118)
302 2g1u_A Hypothetical protein TM 97.3 0.00035 1.2E-08 48.7 5.2 33 3-35 20-52 (155)
303 2ywl_A Thioredoxin reductase r 97.1 0.00033 1.1E-08 50.0 3.7 32 199-230 3-34 (180)
304 1lss_A TRK system potassium up 97.1 0.00067 2.3E-08 46.1 5.1 33 3-35 5-37 (140)
305 4fk1_A Putative thioredoxin re 97.1 0.0013 4.4E-08 51.2 7.0 32 3-34 147-179 (304)
306 2hmt_A YUAA protein; RCK, KTN, 97.1 0.00062 2.1E-08 46.5 4.6 34 2-35 6-39 (144)
307 1id1_A Putative potassium chan 97.1 0.001 3.4E-08 46.2 5.5 33 2-34 3-35 (153)
308 4b63_A L-ornithine N5 monooxyg 97.1 0.0046 1.6E-07 51.8 10.4 33 3-35 247-281 (501)
309 3i83_A 2-dehydropantoate 2-red 97.1 0.00069 2.4E-08 53.3 5.1 35 1-35 1-35 (320)
310 3hn2_A 2-dehydropantoate 2-red 96.9 0.00078 2.7E-08 52.8 4.3 35 1-35 1-35 (312)
311 3hyw_A Sulfide-quinone reducta 96.8 0.0058 2E-07 50.1 9.1 55 103-164 200-254 (430)
312 3g17_A Similar to 2-dehydropan 96.8 0.0011 3.7E-08 51.5 4.4 35 1-35 1-35 (294)
313 3c85_A Putative glutathione-re 96.8 0.0015 5.3E-08 46.7 4.9 33 3-35 40-73 (183)
314 3gg2_A Sugar dehydrogenase, UD 96.7 0.0018 6E-08 53.4 5.0 35 1-35 1-35 (450)
315 4ffl_A PYLC; amino acid, biosy 96.7 0.0022 7.6E-08 51.3 5.5 35 2-36 1-35 (363)
316 3l4b_C TRKA K+ channel protien 96.6 0.0019 6.4E-08 47.7 4.3 32 4-35 2-33 (218)
317 2ew2_A 2-dehydropantoate 2-red 96.6 0.0022 7.5E-08 50.1 4.9 35 1-35 2-36 (316)
318 3lk7_A UDP-N-acetylmuramoylala 96.6 0.0023 7.8E-08 52.9 5.1 33 3-35 10-42 (451)
319 1f0y_A HCDH, L-3-hydroxyacyl-C 96.6 0.0028 9.7E-08 49.3 5.2 34 2-35 15-48 (302)
320 3dfz_A SIRC, precorrin-2 dehyd 96.6 0.0029 1E-07 46.7 4.8 33 2-34 31-63 (223)
321 4e12_A Diketoreductase; oxidor 96.6 0.003 1E-07 48.7 5.1 33 3-35 5-37 (283)
322 1ur5_A Malate dehydrogenase; o 96.5 0.0032 1.1E-07 49.2 5.1 35 1-35 1-36 (309)
323 4dio_A NAD(P) transhydrogenase 96.5 0.0033 1.1E-07 50.6 5.3 33 3-35 191-223 (405)
324 3ego_A Probable 2-dehydropanto 96.5 0.0028 9.5E-08 49.5 4.8 34 1-35 1-34 (307)
325 3kkj_A Amine oxidase, flavin-c 96.5 0.0014 5E-08 49.7 3.1 32 199-230 4-35 (336)
326 2hjr_A Malate dehydrogenase; m 96.5 0.0037 1.3E-07 49.2 5.5 35 2-36 14-49 (328)
327 2raf_A Putative dinucleotide-b 96.5 0.0039 1.3E-07 45.7 5.1 35 2-36 19-53 (209)
328 1kyq_A Met8P, siroheme biosynt 96.5 0.0029 9.8E-08 48.3 4.5 34 2-35 13-46 (274)
329 1lld_A L-lactate dehydrogenase 96.5 0.0034 1.2E-07 49.2 5.1 34 2-35 7-42 (319)
330 2x5o_A UDP-N-acetylmuramoylala 96.4 0.0023 7.9E-08 52.6 4.1 35 2-36 5-39 (439)
331 1z82_A Glycerol-3-phosphate de 96.4 0.0035 1.2E-07 49.5 5.1 35 1-35 13-47 (335)
332 3ado_A Lambda-crystallin; L-gu 96.4 0.004 1.4E-07 48.7 5.0 33 3-35 7-39 (319)
333 3ius_A Uncharacterized conserv 96.4 0.0039 1.3E-07 47.9 4.8 36 1-36 4-39 (286)
334 3p2y_A Alanine dehydrogenase/p 96.3 0.0038 1.3E-07 49.9 4.6 33 3-35 185-217 (381)
335 2dpo_A L-gulonate 3-dehydrogen 96.3 0.0044 1.5E-07 48.5 5.0 34 2-35 6-39 (319)
336 2cul_A Glucose-inhibited divis 96.3 0.0023 8E-08 47.7 3.2 32 198-229 4-35 (232)
337 1pzg_A LDH, lactate dehydrogen 96.3 0.0048 1.6E-07 48.7 5.1 34 3-36 10-44 (331)
338 4ezb_A Uncharacterized conserv 96.3 0.0035 1.2E-07 49.1 4.4 35 1-35 23-58 (317)
339 3dfz_A SIRC, precorrin-2 dehyd 96.3 0.0015 5.3E-08 48.2 2.1 40 194-233 28-67 (223)
340 4gbj_A 6-phosphogluconate dehy 96.3 0.0033 1.1E-07 48.8 4.0 36 1-36 4-39 (297)
341 3doj_A AT3G25530, dehydrogenas 96.3 0.005 1.7E-07 48.1 5.0 35 2-36 21-55 (310)
342 3eag_A UDP-N-acetylmuramate:L- 96.3 0.0056 1.9E-07 48.2 5.3 35 2-36 4-39 (326)
343 3ghy_A Ketopantoate reductase 96.3 0.0051 1.7E-07 48.6 5.1 33 2-34 3-35 (335)
344 1ks9_A KPA reductase;, 2-dehyd 96.3 0.0056 1.9E-07 47.2 5.2 33 4-36 2-34 (291)
345 2a9f_A Putative malic enzyme ( 96.3 0.0052 1.8E-07 49.1 5.0 34 2-35 188-222 (398)
346 2ewd_A Lactate dehydrogenase,; 96.3 0.0053 1.8E-07 48.1 5.0 34 2-35 4-38 (317)
347 3g0o_A 3-hydroxyisobutyrate de 96.2 0.0056 1.9E-07 47.6 5.0 34 2-35 7-40 (303)
348 3gt0_A Pyrroline-5-carboxylate 96.2 0.0062 2.1E-07 45.9 5.0 35 1-35 1-39 (247)
349 3g79_A NDP-N-acetyl-D-galactos 96.2 0.0054 1.8E-07 50.8 5.0 35 2-36 18-54 (478)
350 3vtf_A UDP-glucose 6-dehydroge 96.2 0.0055 1.9E-07 50.1 4.9 34 2-35 21-54 (444)
351 3uox_A Otemo; baeyer-villiger 96.2 0.0045 1.6E-07 52.4 4.6 34 3-36 186-219 (545)
352 3qha_A Putative oxidoreductase 96.2 0.0042 1.4E-07 48.2 4.1 34 3-36 16-49 (296)
353 2y0c_A BCEC, UDP-glucose dehyd 96.2 0.0056 1.9E-07 50.8 5.0 34 2-35 8-41 (478)
354 4ap3_A Steroid monooxygenase; 96.2 0.0055 1.9E-07 51.9 5.1 35 2-36 191-225 (549)
355 1yj8_A Glycerol-3-phosphate de 96.2 0.0045 1.5E-07 49.8 4.3 36 1-36 20-62 (375)
356 4dgk_A Phytoene dehydrogenase; 96.2 0.0021 7.2E-08 53.7 2.5 33 198-230 2-34 (501)
357 3pdu_A 3-hydroxyisobutyrate de 96.2 0.0042 1.4E-07 47.9 4.0 35 2-36 1-35 (287)
358 3dtt_A NADP oxidoreductase; st 96.2 0.0073 2.5E-07 45.4 5.2 34 2-35 19-52 (245)
359 3c24_A Putative oxidoreductase 96.1 0.0077 2.6E-07 46.4 5.2 34 2-35 11-45 (286)
360 1vl6_A Malate oxidoreductase; 96.1 0.0072 2.5E-07 48.2 5.0 33 2-34 192-225 (388)
361 4huj_A Uncharacterized protein 96.1 0.003 1E-07 46.7 2.7 34 2-35 23-57 (220)
362 2vvm_A Monoamine oxidase N; FA 96.1 0.013 4.4E-07 48.9 6.9 59 103-168 255-314 (495)
363 2h78_A Hibadh, 3-hydroxyisobut 96.1 0.0063 2.1E-07 47.3 4.6 34 2-35 3-36 (302)
364 2g1u_A Hypothetical protein TM 96.1 0.0061 2.1E-07 42.2 4.1 41 190-230 12-52 (155)
365 3oj0_A Glutr, glutamyl-tRNA re 96.1 0.0028 9.4E-08 43.4 2.2 33 3-35 22-54 (144)
366 1x13_A NAD(P) transhydrogenase 96.0 0.0069 2.4E-07 49.1 4.8 33 3-35 173-205 (401)
367 1jw9_B Molybdopterin biosynthe 96.0 0.0073 2.5E-07 45.5 4.7 33 3-35 32-65 (249)
368 3k96_A Glycerol-3-phosphate de 96.0 0.0071 2.4E-07 48.2 4.8 34 2-35 29-62 (356)
369 1t2d_A LDH-P, L-lactate dehydr 96.0 0.0088 3E-07 46.9 5.2 35 2-36 4-39 (322)
370 1vpd_A Tartronate semialdehyde 96.0 0.0065 2.2E-07 47.1 4.4 35 1-35 4-38 (299)
371 2pv7_A T-protein [includes: ch 96.0 0.0076 2.6E-07 46.8 4.8 34 2-35 21-55 (298)
372 1bg6_A N-(1-D-carboxylethyl)-L 96.0 0.0081 2.8E-07 47.8 5.0 33 3-35 5-37 (359)
373 2vns_A Metalloreductase steap3 96.0 0.0094 3.2E-07 43.8 5.0 33 3-35 29-61 (215)
374 3pef_A 6-phosphogluconate dehy 96.0 0.0082 2.8E-07 46.3 4.9 34 3-36 2-35 (287)
375 1l7d_A Nicotinamide nucleotide 96.0 0.0094 3.2E-07 48.0 5.3 34 2-35 172-205 (384)
376 3ggo_A Prephenate dehydrogenas 95.9 0.01 3.4E-07 46.5 5.2 34 2-35 33-68 (314)
377 2v6b_A L-LDH, L-lactate dehydr 95.9 0.0094 3.2E-07 46.4 4.9 33 3-35 1-35 (304)
378 3k6j_A Protein F01G10.3, confi 95.9 0.01 3.6E-07 48.7 5.2 34 3-36 55-88 (460)
379 1hyh_A L-hicdh, L-2-hydroxyiso 95.9 0.0093 3.2E-07 46.6 4.7 33 3-35 2-36 (309)
380 4a7p_A UDP-glucose dehydrogena 95.9 0.011 3.7E-07 48.6 5.3 35 2-36 8-42 (446)
381 4dll_A 2-hydroxy-3-oxopropiona 95.9 0.0095 3.2E-07 46.8 4.7 33 3-35 32-64 (320)
382 3l6d_A Putative oxidoreductase 95.9 0.011 3.7E-07 46.1 5.1 34 2-35 9-42 (306)
383 1y6j_A L-lactate dehydrogenase 95.9 0.01 3.5E-07 46.5 4.9 34 2-35 7-42 (318)
384 1yvv_A Amine oxidase, flavin-c 95.8 0.0053 1.8E-07 48.3 3.3 33 198-230 3-35 (336)
385 1pjc_A Protein (L-alanine dehy 95.8 0.012 4.2E-07 47.0 5.4 33 3-35 168-200 (361)
386 3gvi_A Malate dehydrogenase; N 95.8 0.013 4.4E-07 46.0 5.3 35 2-36 7-42 (324)
387 3ihm_A Styrene monooxygenase A 95.8 0.0053 1.8E-07 50.3 3.3 36 197-232 22-57 (430)
388 4hb9_A Similarities with proba 95.8 0.006 2E-07 49.4 3.6 33 198-230 2-34 (412)
389 1zcj_A Peroxisomal bifunctiona 95.8 0.01 3.4E-07 49.2 4.9 33 3-35 38-70 (463)
390 2o3j_A UDP-glucose 6-dehydroge 95.8 0.0082 2.8E-07 49.9 4.4 34 2-35 9-44 (481)
391 1rp0_A ARA6, thiazole biosynth 95.8 0.0074 2.5E-07 46.5 3.8 33 198-230 40-73 (284)
392 3pid_A UDP-glucose 6-dehydroge 95.8 0.01 3.5E-07 48.4 4.7 33 2-35 36-68 (432)
393 3rp8_A Flavoprotein monooxygen 95.8 0.0078 2.7E-07 48.8 4.1 35 196-230 22-56 (407)
394 4g65_A TRK system potassium up 95.8 0.005 1.7E-07 50.9 2.9 34 2-35 3-36 (461)
395 2p4q_A 6-phosphogluconate dehy 95.8 0.012 4E-07 49.2 5.1 35 1-35 9-43 (497)
396 3c7a_A Octopine dehydrogenase; 95.8 0.006 2.1E-07 49.5 3.4 32 1-32 1-33 (404)
397 2bry_A NEDD9 interacting prote 95.8 0.0093 3.2E-07 49.9 4.6 35 196-230 91-125 (497)
398 3hwr_A 2-dehydropantoate 2-red 95.7 0.012 4.2E-07 46.1 5.0 32 2-34 19-50 (318)
399 2g5c_A Prephenate dehydrogenas 95.7 0.013 4.5E-07 45.0 5.0 34 2-35 1-36 (281)
400 1zej_A HBD-9, 3-hydroxyacyl-CO 95.7 0.012 4.2E-07 45.4 4.8 32 3-35 13-44 (293)
401 3l9w_A Glutathione-regulated p 95.7 0.013 4.3E-07 47.8 5.1 34 3-36 5-38 (413)
402 3vrd_B FCCB subunit, flavocyto 95.7 0.0061 2.1E-07 49.4 3.1 53 105-164 204-256 (401)
403 3gpi_A NAD-dependent epimerase 95.7 0.017 6E-07 44.2 5.5 34 2-35 3-36 (286)
404 3tl2_A Malate dehydrogenase; c 95.7 0.015 5E-07 45.5 5.0 32 3-34 9-41 (315)
405 2i6t_A Ubiquitin-conjugating e 95.7 0.013 4.6E-07 45.4 4.8 34 2-35 14-49 (303)
406 1evy_A Glycerol-3-phosphate de 95.6 0.0069 2.4E-07 48.5 3.2 32 4-35 17-48 (366)
407 1mv8_A GMD, GDP-mannose 6-dehy 95.6 0.011 3.8E-07 48.5 4.4 32 4-35 2-33 (436)
408 2vou_A 2,6-dihydroxypyridine h 95.6 0.0093 3.2E-07 48.2 3.9 35 197-231 5-39 (397)
409 2qyt_A 2-dehydropantoate 2-red 95.6 0.01 3.5E-07 46.4 4.0 31 3-33 9-45 (317)
410 2xdo_A TETX2 protein; tetracyc 95.6 0.011 3.8E-07 47.8 4.3 34 197-230 26-59 (398)
411 3oz2_A Digeranylgeranylglycero 95.6 0.0078 2.7E-07 48.3 3.4 32 199-230 6-37 (397)
412 1guz_A Malate dehydrogenase; o 95.6 0.017 5.7E-07 45.1 5.1 33 4-36 2-36 (310)
413 3p7m_A Malate dehydrogenase; p 95.6 0.018 6.2E-07 45.1 5.3 35 2-36 5-40 (321)
414 1kyq_A Met8P, siroheme biosynt 95.6 0.012 4.2E-07 44.8 4.2 37 195-231 11-47 (274)
415 3phh_A Shikimate dehydrogenase 95.5 0.019 6.7E-07 43.6 5.2 33 3-35 119-151 (269)
416 3r6d_A NAD-dependent epimerase 95.5 0.021 7.4E-07 41.9 5.4 36 1-36 4-41 (221)
417 2cvz_A Dehydrogenase, 3-hydrox 95.5 0.011 3.9E-07 45.4 4.0 32 3-35 2-33 (289)
418 2eez_A Alanine dehydrogenase; 95.5 0.019 6.4E-07 46.0 5.4 33 3-35 167-199 (369)
419 3qsg_A NAD-binding phosphogluc 95.5 0.015 5E-07 45.5 4.6 33 2-34 24-57 (312)
420 3alj_A 2-methyl-3-hydroxypyrid 95.5 0.01 3.5E-07 47.6 3.8 35 197-231 11-45 (379)
421 4e21_A 6-phosphogluconate dehy 95.5 0.018 6E-07 45.9 5.0 33 3-35 23-55 (358)
422 1a5z_A L-lactate dehydrogenase 95.5 0.015 5.3E-07 45.5 4.7 33 3-35 1-35 (319)
423 2vhw_A Alanine dehydrogenase; 95.5 0.02 6.8E-07 46.0 5.4 34 2-35 168-201 (377)
424 1nyt_A Shikimate 5-dehydrogena 95.5 0.02 6.9E-07 43.7 5.2 33 3-35 120-152 (271)
425 1y56_A Hypothetical protein PH 95.5 0.045 1.5E-06 45.7 7.7 47 111-164 265-311 (493)
426 3ka7_A Oxidoreductase; structu 95.5 0.036 1.2E-06 45.0 7.0 57 103-167 196-253 (425)
427 3tri_A Pyrroline-5-carboxylate 95.4 0.022 7.4E-07 43.8 5.3 34 2-35 3-39 (280)
428 1txg_A Glycerol-3-phosphate de 95.4 0.016 5.6E-07 45.6 4.7 30 4-33 2-31 (335)
429 3mog_A Probable 3-hydroxybutyr 95.4 0.018 6.3E-07 47.8 5.1 33 3-35 6-38 (483)
430 2uyy_A N-PAC protein; long-cha 95.4 0.019 6.6E-07 44.8 5.0 33 3-35 31-63 (316)
431 3orq_A N5-carboxyaminoimidazol 95.4 0.025 8.4E-07 45.5 5.6 35 2-36 12-46 (377)
432 1jay_A Coenzyme F420H2:NADP+ o 95.4 0.021 7.1E-07 41.7 4.8 32 4-35 2-34 (212)
433 2q3e_A UDP-glucose 6-dehydroge 95.4 0.015 5.1E-07 48.2 4.4 34 2-35 5-40 (467)
434 4gwg_A 6-phosphogluconate dehy 95.3 0.021 7.1E-07 47.4 5.1 35 2-36 4-38 (484)
435 2rcy_A Pyrroline carboxylate r 95.3 0.021 7.1E-07 43.3 4.8 34 3-36 5-42 (262)
436 3ktd_A Prephenate dehydrogenas 95.3 0.023 7.9E-07 44.9 5.1 34 2-35 8-41 (341)
437 2iid_A L-amino-acid oxidase; f 95.3 0.011 3.8E-07 49.3 3.5 34 197-230 33-66 (498)
438 3d0o_A L-LDH 1, L-lactate dehy 95.3 0.021 7.3E-07 44.6 4.9 33 3-35 7-41 (317)
439 3pqe_A L-LDH, L-lactate dehydr 95.3 0.022 7.4E-07 44.7 4.9 34 2-35 5-40 (326)
440 3rui_A Ubiquitin-like modifier 95.3 0.024 8.3E-07 44.5 5.1 34 2-35 34-68 (340)
441 2egg_A AROE, shikimate 5-dehyd 95.3 0.022 7.7E-07 44.1 4.9 33 3-35 142-175 (297)
442 1ldn_A L-lactate dehydrogenase 95.3 0.023 7.8E-07 44.5 4.9 34 2-35 6-41 (316)
443 1ryi_A Glycine oxidase; flavop 95.2 0.01 3.6E-07 47.5 3.1 33 198-230 18-50 (382)
444 1oju_A MDH, malate dehydrogena 95.2 0.022 7.4E-07 44.0 4.6 32 4-35 2-35 (294)
445 3vps_A TUNA, NAD-dependent epi 95.2 0.027 9.2E-07 43.8 5.3 35 2-36 7-42 (321)
446 1dlj_A UDP-glucose dehydrogena 95.2 0.017 5.7E-07 46.9 4.1 31 4-35 2-32 (402)
447 3ax6_A Phosphoribosylaminoimid 95.2 0.027 9.2E-07 45.3 5.4 34 2-35 1-34 (380)
448 1pjq_A CYSG, siroheme synthase 95.2 0.022 7.5E-07 47.0 4.9 33 3-35 13-45 (457)
449 3h8v_A Ubiquitin-like modifier 95.2 0.023 8E-07 43.7 4.7 33 3-35 37-70 (292)
450 3g5s_A Methylenetetrahydrofola 95.2 0.013 4.4E-07 47.2 3.3 33 198-230 2-34 (443)
451 2f1k_A Prephenate dehydrogenas 95.2 0.025 8.6E-07 43.3 4.9 32 4-35 2-33 (279)
452 3m2p_A UDP-N-acetylglucosamine 95.2 0.027 9.4E-07 43.7 5.2 34 1-34 1-35 (311)
453 1hdo_A Biliverdin IX beta redu 95.2 0.031 1.1E-06 40.3 5.2 33 3-35 4-37 (206)
454 3e8x_A Putative NAD-dependent 95.2 0.028 9.7E-07 41.7 5.0 35 2-36 21-56 (236)
455 3c4a_A Probable tryptophan hyd 95.1 0.014 4.8E-07 46.9 3.5 33 199-231 2-36 (381)
456 1x0v_A GPD-C, GPDH-C, glycerol 95.1 0.015 5E-07 46.3 3.6 34 3-36 9-49 (354)
457 3vku_A L-LDH, L-lactate dehydr 95.1 0.026 8.9E-07 44.3 4.9 34 2-35 9-44 (326)
458 3cky_A 2-hydroxymethyl glutara 95.1 0.023 7.8E-07 44.0 4.6 34 2-35 4-37 (301)
459 2oln_A NIKD protein; flavoprot 95.1 0.015 5.1E-07 46.9 3.7 33 198-230 5-37 (397)
460 3q2o_A Phosphoribosylaminoimid 95.1 0.031 1.1E-06 45.1 5.5 33 3-35 15-47 (389)
461 2aef_A Calcium-gated potassium 95.1 0.0091 3.1E-07 44.5 2.2 33 3-36 10-42 (234)
462 3d4o_A Dipicolinate synthase s 95.1 0.029 9.9E-07 43.4 5.1 33 3-35 156-188 (293)
463 1p77_A Shikimate 5-dehydrogena 95.1 0.022 7.4E-07 43.6 4.3 33 3-35 120-152 (272)
464 3obb_A Probable 3-hydroxyisobu 95.1 0.024 8.1E-07 44.0 4.6 34 2-35 3-36 (300)
465 3v76_A Flavoprotein; structura 95.1 0.013 4.5E-07 47.8 3.3 34 197-230 27-60 (417)
466 3nep_X Malate dehydrogenase; h 95.1 0.026 9E-07 44.0 4.8 34 3-36 1-36 (314)
467 2rir_A Dipicolinate synthase, 95.1 0.033 1.1E-06 43.2 5.4 33 3-35 158-190 (300)
468 3nks_A Protoporphyrinogen oxid 95.1 0.015 5.1E-07 48.2 3.6 33 198-230 3-37 (477)
469 2x3n_A Probable FAD-dependent 95.1 0.014 4.9E-07 47.1 3.4 33 198-230 7-39 (399)
470 2e1m_A L-glutamate oxidase; L- 95.1 0.017 5.8E-07 46.3 3.7 34 196-229 43-76 (376)
471 3dme_A Conserved exported prot 95.1 0.015 5E-07 46.3 3.4 33 198-230 5-37 (369)
472 3nix_A Flavoprotein/dehydrogen 95.1 0.015 5.2E-07 47.2 3.5 33 198-230 6-38 (421)
473 2izz_A Pyrroline-5-carboxylate 95.0 0.027 9.2E-07 44.2 4.8 33 3-35 23-59 (322)
474 1yqg_A Pyrroline-5-carboxylate 95.0 0.027 9.3E-07 42.7 4.7 32 4-35 2-34 (263)
475 2gf2_A Hibadh, 3-hydroxyisobut 95.0 0.024 8.3E-07 43.8 4.5 32 4-35 2-33 (296)
476 3dhn_A NAD-dependent epimerase 95.0 0.021 7.3E-07 42.0 4.0 34 2-35 4-38 (227)
477 2uzz_A N-methyl-L-tryptophan o 95.0 0.011 3.9E-07 47.1 2.6 33 198-230 3-35 (372)
478 1id1_A Putative potassium chan 95.0 0.024 8.3E-07 39.0 4.0 34 197-230 3-36 (153)
479 3p1w_A Rabgdi protein; GDI RAB 95.0 0.049 1.7E-06 45.1 6.4 57 103-165 256-313 (475)
480 1zud_1 Adenylyltransferase THI 95.0 0.028 9.7E-07 42.4 4.6 33 3-35 29-62 (251)
481 2hk9_A Shikimate dehydrogenase 95.0 0.029 9.9E-07 42.9 4.7 33 3-35 130-162 (275)
482 2gf3_A MSOX, monomeric sarcosi 95.0 0.016 5.5E-07 46.5 3.4 33 198-230 4-36 (389)
483 3c96_A Flavin-containing monoo 95.0 0.017 5.9E-07 46.9 3.6 33 198-230 5-38 (410)
484 3ew7_A LMO0794 protein; Q8Y8U8 94.9 0.038 1.3E-06 40.4 5.2 32 4-35 2-34 (221)
485 1c0p_A D-amino acid oxidase; a 94.9 0.023 7.9E-07 45.2 4.3 33 198-230 7-39 (363)
486 3fi9_A Malate dehydrogenase; s 94.9 0.037 1.3E-06 43.7 5.3 34 2-35 8-44 (343)
487 2ahr_A Putative pyrroline carb 94.9 0.027 9.1E-07 42.6 4.4 34 2-35 3-36 (259)
488 1yb4_A Tartronic semialdehyde 94.9 0.019 6.4E-07 44.4 3.6 33 2-35 3-35 (295)
489 2b9w_A Putative aminooxidase; 94.9 0.017 5.9E-07 47.0 3.5 34 197-230 6-40 (424)
490 3gvp_A Adenosylhomocysteinase 94.9 0.025 8.7E-07 45.8 4.3 33 3-35 221-253 (435)
491 3cgv_A Geranylgeranyl reductas 94.9 0.017 5.7E-07 46.5 3.4 33 198-230 5-37 (397)
492 3qj4_A Renalase; FAD/NAD(P)-bi 94.9 0.016 5.6E-07 45.7 3.2 33 198-230 2-37 (342)
493 3ldh_A Lactate dehydrogenase; 94.9 0.033 1.1E-06 43.7 4.8 33 3-35 22-56 (330)
494 4aj2_A L-lactate dehydrogenase 94.9 0.038 1.3E-06 43.4 5.2 34 2-35 19-54 (331)
495 1k0i_A P-hydroxybenzoate hydro 94.9 0.014 4.9E-07 47.0 2.9 33 198-230 3-35 (394)
496 3k7m_X 6-hydroxy-L-nicotine ox 94.9 0.016 5.4E-07 47.3 3.2 32 199-230 3-34 (431)
497 1y56_B Sarcosine oxidase; dehy 94.8 0.016 5.4E-07 46.5 3.1 33 198-230 6-38 (382)
498 2wtb_A MFP2, fatty acid multif 94.8 0.028 9.7E-07 49.2 4.8 34 2-35 312-345 (725)
499 3ond_A Adenosylhomocysteinase; 94.8 0.034 1.2E-06 45.9 4.9 33 3-35 266-298 (488)
500 4gde_A UDP-galactopyranose mut 94.8 0.018 6.2E-07 48.1 3.5 33 198-230 11-44 (513)
No 1
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=100.00 E-value=1.7e-33 Score=234.02 Aligned_cols=244 Identities=30% Similarity=0.503 Sum_probs=190.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHH---cCCc---EEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccc
Q 024975 1 MFRHVAVIGAGAAGLVVGHELLR---EGHT---VVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLP 74 (259)
Q Consensus 1 ~~~~v~IIG~G~~Gl~~a~~L~~---~g~~---v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (259)
|.+||+|||||++|+++|..|++ .|.+ |+|||+.+.+||.|.+.......+.+ ....+..|..+..+.+
T Consensus 1 M~~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g-----~~~~~~~y~~l~~~~~ 75 (464)
T 2xve_A 1 MATRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENG-----EPVHSSMYRYLWSNGP 75 (464)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTS-----SBCCCCCCTTCBCSSC
T ss_pred CCCcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccC-----CCCcCccccchhhcCC
Confidence 66899999999999999999999 9999 99999999999999875432221111 1223456666777777
Q ss_pred cccceecCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCC-CcEEEEEEecC-CceEE
Q 024975 75 RELMGFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVES-NKWKVKSRKKD-DVVEE 152 (259)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~-~~~~v~~~~g~-~~~~~ 152 (259)
...+.+.++++... ...+...|+++.++.+|+.+++++++++..++++++|++++..++ +.|.|.+.++. +....
T Consensus 76 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~ 152 (464)
T 2xve_A 76 KECLEFADYTFDEH---FGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYS 152 (464)
T ss_dssp GGGTCBTTBCHHHH---HSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEE
T ss_pred hhhcccCCCCCCcc---cCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEE
Confidence 77777766665432 012346788889999999999999998766889999999998763 37999988742 33457
Q ss_pred EEeCEEEEccCCCCCCccCCCCCCCCCCCceEEcccCCCCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCCCc
Q 024975 153 ETFDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVAD 232 (259)
Q Consensus 153 ~~ad~VIlAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~~~ 232 (259)
+.||+||+|||+++.|+.|.++|.+.|.+...++..+.....+.+++|+|||+|.+|+|+|..|.+.+.+|++++|++..
T Consensus 153 ~~~d~VVvAtG~~s~p~~p~ipG~~~~~g~~~hs~~~~~~~~~~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~ 232 (464)
T 2xve_A 153 EEFDYVVCCTGHFSTPYVPEFEGFEKFGGRILHAHDFRDALEFKDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAP 232 (464)
T ss_dssp EEESEEEECCCSSSSBCCCCCBTTTTCCSEEEEGGGCCCGGGGTTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCC
T ss_pred EEcCEEEECCCCCCCCccCCCCCcccCCceEEehhhhCCHhHcCCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCC
Confidence 89999999999999999999999998889899998888777677899999999999999999999999999999998742
Q ss_pred ccccCCCCCCCceEeeeeeEEee
Q 024975 233 ETHEKQPGYDNMWLHSMVRTKKC 255 (259)
Q Consensus 233 ~~~~~~~~~~~~~~~~~v~~~~~ 255 (259)
. ...+. .++++.+.|+++++
T Consensus 233 ~-~~~~~--~~V~~~~~V~~i~~ 252 (464)
T 2xve_A 233 M-GYKWP--ENWDERPNLVRVDT 252 (464)
T ss_dssp C-CCCCC--TTEEECSCEEEECS
T ss_pred C-CCCCC--CceEEcCCeEEEeC
Confidence 1 11122 36666677777754
No 2
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=100.00 E-value=3.2e-32 Score=225.83 Aligned_cols=237 Identities=30% Similarity=0.531 Sum_probs=181.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCC--cEEEEeeCCCcCceeeeCCCCCCCCCCCCC------CC--------CCccccc
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGH--TVVVYEKGEQVGGSWIYTSETESDPLGVDP------NR--------YPVHSSL 65 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~--~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~------~~--------~~~~~~~ 65 (259)
.+||+|||||++|+++|..|++.|. +|+|||+.+.+||.|.+...... ...... .. ....+..
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~-~~~ip~~~~~~~~~~~~~g~~~~~~~~~~ 84 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSN-KLPVPSTNPILTTEPIVGPAALPVYPSPL 84 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCS-CCCSSBCCTTCCCCCBCCSSSCCBCCCCC
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCc-ccccccccccccccccccccccCCccCch
Confidence 4799999999999999999999999 99999999999999977532110 000000 00 0012334
Q ss_pred cccceeccccccceecCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEe
Q 024975 66 YKSLRVNLPRELMGFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRK 145 (259)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~ 145 (259)
|..+..+.+...+.+.++++.. ....|+++..+.+|+.+++.+++.. ++++++|++++..+ +.|.|++.+
T Consensus 85 ~~~l~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~~l~~~~~~~~~~--i~~~t~V~~v~~~~-~~~~V~~~~ 154 (447)
T 2gv8_A 85 YRDLQTNTPIELMGYCDQSFKP-------QTLQFPHRHTIQEYQRIYAQPLLPF--IKLATDVLDIEKKD-GSWVVTYKG 154 (447)
T ss_dssp CTTCBCSSCHHHHSCTTCCCCT-------TCCSSCBHHHHHHHHHHHHGGGGGG--EECSEEEEEEEEET-TEEEEEEEE
T ss_pred hhhhccCCCHHHhccCCCCCCC-------CCCCCCCHHHHHHHHHHHHHHhhCe--EEeCCEEEEEEeCC-CeEEEEEee
Confidence 5555555555555555555432 3457888899999999999888776 89999999998875 779999876
Q ss_pred cC-Cc-eEEEEeCEEEEccCCCCCCccCCCCCCCCC----CCceEEcccCCCCCCCCCCeEEEEccCcCHHHHHHHHhcc
Q 024975 146 KD-DV-VEEETFDAVVVCNGHFSVPRLAQVPGIDSW----PGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGF 219 (259)
Q Consensus 146 g~-~~-~~~~~ad~VIlAtG~~s~~~~~~~~g~~~~----~~~~~~~~~~~~~~~~~~~~v~viG~G~~a~e~a~~l~~~ 219 (259)
.. +. ...+.||+||+|||+++.|++|.++|.+.+ .+...|+..+.....+.+++|+|||+|++|+|+|..|.+.
T Consensus 155 ~~~G~~~~~~~~d~VVvAtG~~s~p~~p~i~G~~~~~~~~~g~v~~~~~~~~~~~~~~k~VvVvG~G~sg~e~A~~l~~~ 234 (447)
T 2gv8_A 155 TKAGSPISKDIFDAVSICNGHYEVPYIPNIKGLDEYAKAVPGSVLHSSLFREPELFVGESVLVVGGASSANDLVRHLTPV 234 (447)
T ss_dssp SSTTCCEEEEEESEEEECCCSSSSBCBCCCBTHHHHHHHSTTSEEEGGGCCCGGGGTTCCEEEECSSHHHHHHHHHHTTT
T ss_pred cCCCCeeEEEEeCEEEECCCCCCCCCCCCCCChhhhhccCCccEEEecccCChhhcCCCEEEEEccCcCHHHHHHHHHHH
Confidence 21 22 347899999999999889999999997653 5678888888877767789999999999999999999999
Q ss_pred cCe-EEEEecCCCcccccCCCCCCCceEeeeeeEEee
Q 024975 220 AKE-VHIASRSVADETHEKQPGYDNMWLHSMVRTKKC 255 (259)
Q Consensus 220 ~~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~ 255 (259)
+.+ |++++|++.. +...++...+.|+++++
T Consensus 235 ~~~~V~l~~r~~~~------l~~~~i~~~~~v~~~~~ 265 (447)
T 2gv8_A 235 AKHPIYQSLLGGGD------IQNESLQQVPEITKFDP 265 (447)
T ss_dssp SCSSEEEECTTCCS------CBCSSEEEECCEEEEET
T ss_pred hCCcEEEEeCCCCc------CCCCCeEEecCeEEEec
Confidence 998 9999998743 33457777888888753
No 3
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.97 E-value=3e-31 Score=223.83 Aligned_cols=202 Identities=28% Similarity=0.431 Sum_probs=159.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
.+||+|||||++|+++|..|.+.|++|+|+|+++.+||+|..+. |.......+...+.+.
T Consensus 9 ~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~--------------------yPg~~~d~~~~~y~~~ 68 (545)
T 3uox_A 9 ALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNR--------------------YPGCRLDTESYAYGYF 68 (545)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCC--------------------CTTCBCSSCHHHHCHH
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCC--------------------CCceeecCchhhcccc
Confidence 36999999999999999999999999999999999999996531 1111111111111111
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCC-CcEEEEEEecCCceEEEEeCEEEE
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVES-NKWKVKSRKKDDVVEEETFDAVVV 160 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~-~~~~v~~~~g~~~~~~~~ad~VIl 160 (259)
..+ .......+...|+.+.++..|+.+.++++++...++++++|++++..++ +.|.|.+.+|. .+.||+||+
T Consensus 69 f~~---~~~~~~~~~~~~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~----~~~ad~lV~ 141 (545)
T 3uox_A 69 ALK---GIIPEWEWSENFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEE----VVTCRFLIS 141 (545)
T ss_dssp HHT---TSSTTCCCSBSSCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTE----EEEEEEEEE
T ss_pred cCc---ccccCCCccccCCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCC----EEEeCEEEE
Confidence 000 0001123456778889999999999999998545999999999998653 57999987754 799999999
Q ss_pred ccCCCCCCccCCCCCCCCCCCceEEcccCCCC-------CCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 161 CNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIP-------NPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 161 AtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~-------~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
|||.++.|+.|.+||.+.|.+...|+..+... ....+++|+|||+|.+|+|+|..|.+.+.+|++++|++
T Consensus 142 AtG~~s~p~~p~ipG~~~f~g~~~h~~~~~~~~~~~~~~~~~~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~ 218 (545)
T 3uox_A 142 ATGPLSASRMPDIKGIDSFKGESFHSSRWPTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTP 218 (545)
T ss_dssp CCCSCBC---CCCTTGGGCCSEEEEGGGCCBCTTSCBSCCCCBTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSC
T ss_pred CcCCCCCCcCCCCCCccccCCCeEEcccccccccccccccccCCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCC
Confidence 99998899999999999999999999887765 66778999999999999999999999999999999998
No 4
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.97 E-value=3.1e-31 Score=223.89 Aligned_cols=202 Identities=27% Similarity=0.426 Sum_probs=161.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
++||+|||||++|+++|..|.+.|++|+|+|+++.+||+|..+. |.......+...+.+.
T Consensus 21 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~--------------------ypg~~~dv~s~~y~~~ 80 (549)
T 4ap3_A 21 SYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNR--------------------YPGARCDVESIDYSYS 80 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCC--------------------CTTCBCSSCTTTSSCC
T ss_pred CCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCC--------------------CCCceeCCCchhcccc
Confidence 36999999999999999999999999999999999999997542 0011111111111110
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCC-CcEEEEEEecCCceEEEEeCEEEE
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVES-NKWKVKSRKKDDVVEEETFDAVVV 160 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~-~~~~v~~~~g~~~~~~~~ad~VIl 160 (259)
+.........+...|+.+.++..|+.+.++++++...++++++|++++..++ ..|.|.+.+|. .+.||+||+
T Consensus 81 ---f~~~~~~~~~~~~~~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~----~i~ad~lV~ 153 (549)
T 4ap3_A 81 ---FSPELEQEWNWSEKYATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGD----EVSARFLVV 153 (549)
T ss_dssp ---SCHHHHHHCCCSSSSCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCC----EEEEEEEEE
T ss_pred ---cccccccCCCCccCCCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCC----EEEeCEEEE
Confidence 0000000013445678889999999999999998444999999999998763 47999988765 799999999
Q ss_pred ccCCCCCCccCCCCCCCCCCCceEEcccCC-CCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 161 CNGHFSVPRLAQVPGIDSWPGKQMHSHNYR-IPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 161 AtG~~s~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
|||.++.|+.|.+||.+.|.+..+|+..+. ......+++|+|||+|.+|+|+|..|.+.+.+|++++|++
T Consensus 154 AtG~~s~p~~p~ipG~~~f~g~~~~~~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~ 224 (549)
T 4ap3_A 154 AAGPLSNANTPAFDGLDRFTGDIVHTARWPHDGVDFTGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSA 224 (549)
T ss_dssp CCCSEEECCCCCCTTGGGCCSEEEEGGGCCTTCCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSC
T ss_pred CcCCCCCCCCCCCCCcccCCCceEEeccccccccccCCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCC
Confidence 999888999999999999999999999888 5667788999999999999999999999999999999998
No 5
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.97 E-value=2.4e-31 Score=224.24 Aligned_cols=201 Identities=24% Similarity=0.415 Sum_probs=161.7
Q ss_pred CeEEEECCChHHHHHHHHHH-HcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 3 RHVAVIGAGAAGLVVGHELL-REGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~-~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
+||+|||||++|+++|..|+ +.|.+|+|+|+++.+||+|..+. |.......+...+.+.
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~--------------------ypg~~~d~~s~~~~~~ 68 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNR--------------------YPGALSDTESHLYRFS 68 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCC--------------------CTTCEEEEEGGGSSCC
T ss_pred CCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccC--------------------CCCceecCCcceeeec
Confidence 69999999999999999999 89999999999999999997531 1111111111111111
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCC-CcEEEEEEecCCceEEEEeCEEEE
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVES-NKWKVKSRKKDDVVEEETFDAVVV 160 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~-~~~~v~~~~g~~~~~~~~ad~VIl 160 (259)
+.........+...|+.+.++.+|+.+.++++++...++++++|++++..++ +.|.|.+.+|. .+.||+||+
T Consensus 69 ---~~~~~~~~~~~~~~~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~----~i~ad~lV~ 141 (540)
T 3gwf_A 69 ---FDRDLLQESTWKTTYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGE----VYRAKYVVN 141 (540)
T ss_dssp ---SCHHHHHHCCCSBSEEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSC----EEEEEEEEE
T ss_pred ---cccccccCCCCcccCCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCC----EEEeCEEEE
Confidence 0000000012344567789999999999999998444999999999998764 47999988765 789999999
Q ss_pred ccCCCCCCccCCCCCCCCCCCceEEcccCCCCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 161 CNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 161 AtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
|||.++.|+.|++||.+.|.+...|+..+.......+++|+|||+|.+|+|+|..|.+.+.+|++++|++
T Consensus 142 AtG~~s~p~~p~ipG~~~f~g~~~~~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~ 211 (540)
T 3gwf_A 142 AVGLLSAINFPNLPGLDTFEGETIHTAAWPEGKSLAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTP 211 (540)
T ss_dssp CCCSCCSBCCCCCTTGGGCCSEEEEGGGCCSSCCCTTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSC
T ss_pred CCcccccCCCCCCCCccccCCCEEEeecCCCccccccceEEEECCCchHHHHHHHHHhhCCEEEEEECCC
Confidence 9999899999999999999999999998888777889999999999999999999999999999999998
No 6
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.97 E-value=2.3e-30 Score=208.83 Aligned_cols=192 Identities=26% Similarity=0.448 Sum_probs=158.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
++||+|||||++|+++|..|+++|++|+|+|+.+.+||.|... +..+....+.....+.
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~---------------------~~~~~~~~~~~~~~~~ 61 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHA---------------------WHSLHLFSPAGWSSIP 61 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGS---------------------CTTCBCSSCGGGSCCS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCC---------------------CCCcEecCchhhhhCC
Confidence 4799999999999999999999999999999999999998752 1112222222222222
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEE-EEEEecCCceEEEEeCEEEE
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWK-VKSRKKDDVVEEETFDAVVV 160 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~-v~~~~g~~~~~~~~ad~VIl 160 (259)
.++.. .....|+.+.++..++.+.+++.+++ ++++++|++++..+ +.|. |.+.++ .+.||+||+
T Consensus 62 ~~~~~-------~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~v~~i~~~~-~~~~~v~~~~g-----~~~~d~vV~ 126 (357)
T 4a9w_A 62 GWPMP-------ASQGPYPARAEVLAYLAQYEQKYALP--VLRPIRVQRVSHFG-ERLRVVARDGR-----QWLARAVIS 126 (357)
T ss_dssp SSCCC-------CCSSSSCBHHHHHHHHHHHHHHTTCC--EECSCCEEEEEEET-TEEEEEETTSC-----EEEEEEEEE
T ss_pred CCCCC-------CCccCCCCHHHHHHHHHHHHHHcCCE--EEcCCEEEEEEECC-CcEEEEEeCCC-----EEEeCEEEE
Confidence 22221 23456778899999999999999999 99999999999876 6787 776553 699999999
Q ss_pred ccCCCCCCccCCCCCCCCCCCceEEcccCCCCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 161 CNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 161 AtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
|||.++.|.+|.++|...+.+...+...+.......+++|+|||+|.+|+|+|..|.+.+ +|++++|++
T Consensus 127 AtG~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 127 ATGTWGEAYTPEYQGLESFAGIQLHSAHYSTPAPFAGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp CCCSGGGBCCCCCTTGGGCCSEEEEGGGCCCSGGGTTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CCCCCCCCCCCCCCCccccCCcEEEeccCCChhhcCCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 999888888999999988888889988888877778899999999999999999999998 599999985
No 7
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.97 E-value=1.8e-29 Score=213.71 Aligned_cols=202 Identities=29% Similarity=0.478 Sum_probs=156.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
.+||+|||||++|+++|..|++.|++|+|+|+++.+||+|..+.. +. .....+...+.+.
T Consensus 16 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~---------pg-----------~~~d~~~~~~~~~ 75 (542)
T 1w4x_A 16 EVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRY---------PG-----------ARCDIESIEYCYS 75 (542)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCC---------TT-----------CBCSSCTTTSSCC
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCC---------Cc-----------eeecccccccccc
Confidence 369999999999999999999999999999999999999964310 00 0000000000000
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCC-CcEEEEEEecCCceEEEEeCEEEE
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVES-NKWKVKSRKKDDVVEEETFDAVVV 160 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~-~~~~v~~~~g~~~~~~~~ad~VIl 160 (259)
+.........+...|+.+.++.+|+.+.++++++...++++++|++++..++ +.|.|.+++|. .++||+||+
T Consensus 76 ---f~~~~~~~~~~~~~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~----~~~ad~vV~ 148 (542)
T 1w4x_A 76 ---FSEEVLQEWNWTERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGD----RIRARYLIM 148 (542)
T ss_dssp ---SCHHHHHHCCCCBSSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCC----EEEEEEEEE
T ss_pred ---cChhhhhccCcccccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCC----EEEeCEEEE
Confidence 0000000012334577889999999999988875445999999999998753 47999887654 789999999
Q ss_pred ccCCCCCCccCCCCCCCCCCCceEEcccCC-CCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 161 CNGHFSVPRLAQVPGIDSWPGKQMHSHNYR-IPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 161 AtG~~s~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
|||.++.|+.|+++|++.|.+..+|+..+. ......+++|+|||+|.+|+|++..+.+.+.+|++++|++
T Consensus 149 AtG~~s~p~~p~i~G~~~f~G~~~hs~~~~~~~~~~~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~ 219 (542)
T 1w4x_A 149 ASGQLSVPQLPNFPGLKDFAGNLYHTGNWPHEPVDFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTP 219 (542)
T ss_dssp CCCSCCCCCCCCCTTGGGCCSEEEEGGGCCSSCCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSC
T ss_pred CcCCCCCCCCCCCCCcccCCCceEECCCCCCchhccCCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCC
Confidence 999999999999999998999999998877 4456678999999999999999999999999999999987
No 8
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.95 E-value=7.3e-28 Score=191.60 Aligned_cols=199 Identities=20% Similarity=0.212 Sum_probs=151.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
++||+|||||++|+++|..|.+.|.+|+|+|++ +||.|..... ...+.
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~~~~------------------------------~~~~~ 62 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTEAGI------------------------------VDDYL 62 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGGCCE------------------------------ECCST
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeeccccc------------------------------ccccC
Confidence 479999999999999999999999999999998 8888764210 00000
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEc
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlA 161 (259)
.+ ......++..++.+.+.+.+++ ++. ++|+++...+ +.|.+.+.++. .+.+|+||+|
T Consensus 63 ~~--------------~~~~~~~~~~~~~~~~~~~~v~--~~~-~~v~~i~~~~-~~~~v~~~~g~----~~~~d~lvlA 120 (323)
T 3f8d_A 63 GL--------------IEIQASDMIKVFNKHIEKYEVP--VLL-DIVEKIENRG-DEFVVKTKRKG----EFKADSVILG 120 (323)
T ss_dssp TS--------------TTEEHHHHHHHHHHHHHTTTCC--EEE-SCEEEEEEC---CEEEEESSSC----EEEEEEEEEC
T ss_pred CC--------------CCCCHHHHHHHHHHHHHHcCCE--EEE-EEEEEEEecC-CEEEEEECCCC----EEEcCEEEEC
Confidence 01 1123478899999999999998 787 8999999875 77888887755 7999999999
Q ss_pred cCCCCCCccCCCCCCCCCCCceEEcccCCCCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCCC----cccccC
Q 024975 162 NGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA----DETHEK 237 (259)
Q Consensus 162 tG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~~----~~~~~~ 237 (259)
|| +.++.|.++|...+.+...+...........+++++|+|+|.+|+|+|..|.+.+.+|++++|.+. +++.++
T Consensus 121 tG--~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~ 198 (323)
T 3f8d_A 121 IG--VKRRKLGVPGEQEFAGRGISYCSVADAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKAQPIYVET 198 (323)
T ss_dssp CC--CEECCCCCTTTTTTBTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCSCHHHHHH
T ss_pred cC--CCCccCCCCchhhhcCCceEEeccCCHhHcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCcCHHHHHH
Confidence 99 568888999988776655554444443445679999999999999999999999999999999982 345555
Q ss_pred CCCCCCceE--eeeeeEEeec
Q 024975 238 QPGYDNMWL--HSMVRTKKCS 256 (259)
Q Consensus 238 ~~~~~~~~~--~~~v~~~~~~ 256 (259)
+.+..++.+ ++.|++++..
T Consensus 199 ~~~~~gv~~~~~~~v~~i~~~ 219 (323)
T 3f8d_A 199 VKKKPNVEFVLNSVVKEIKGD 219 (323)
T ss_dssp HHTCTTEEEECSEEEEEEEES
T ss_pred HHhCCCcEEEeCCEEEEEecc
Confidence 555445555 4667777654
No 9
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.95 E-value=7.8e-27 Score=185.97 Aligned_cols=202 Identities=22% Similarity=0.281 Sum_probs=148.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
++||+||||||+|+++|..|.+.|.+|+|+|+. .+||.|...... ..+.
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~~------------------------------~~~~ 56 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIAWSEEV------------------------------ENFP 56 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGGCSCB------------------------------CCST
T ss_pred cCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCccccccccc------------------------------ccCC
Confidence 379999999999999999999999999999998 688877642100 0000
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEe--CCCcEEEEEEecCCceEEEEeCEEE
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLV--ESNKWKVKSRKKDDVVEEETFDAVV 159 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~--~~~~~~v~~~~g~~~~~~~~ad~VI 159 (259)
.++ ....+.++..++.+.+.+.+++ ++. .+|+++... ++..|.+.+.++. .+.+|+||
T Consensus 57 ~~~-------------~~~~~~~~~~~l~~~~~~~gv~--~~~-~~v~~i~~~~~~~~~~~v~~~~g~----~~~~~~vv 116 (325)
T 2q7v_A 57 GFP-------------EPIAGMELAQRMHQQAEKFGAK--VEM-DEVQGVQHDATSHPYPFTVRGYNG----EYRAKAVI 116 (325)
T ss_dssp TCS-------------SCBCHHHHHHHHHHHHHHTTCE--EEE-CCEEEEEECTTSSSCCEEEEESSC----EEEEEEEE
T ss_pred CCC-------------CCCCHHHHHHHHHHHHHHcCCE--EEe-eeEEEEEeccCCCceEEEEECCCC----EEEeCEEE
Confidence 000 0123478888999999889998 776 689999876 4222888777654 79999999
Q ss_pred EccCCCCCCccCCCCCCCCCCCceEEcccCCCCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCCC----cccc
Q 024975 160 VCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA----DETH 235 (259)
Q Consensus 160 lAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~~----~~~~ 235 (259)
+||| +.|+.|.++|...+.+...+...+.......+++++|+|+|.+|+|+|..|.+.+.+|++++|++. +.+.
T Consensus 117 ~AtG--~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~ 194 (325)
T 2q7v_A 117 LATG--ADPRKLGIPGEDNFWGKGVSTCATCDGFFYKGKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLRANKVAQ 194 (325)
T ss_dssp ECCC--EEECCCCCTTTTTTBTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCSCHHHH
T ss_pred ECcC--CCcCCCCCCChhhccCceEEEeccCCHHHcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCCcchHHH
Confidence 9999 578888889887665544444332222334568999999999999999999999999999999872 3344
Q ss_pred cCCCCCCCceE--eeeeeEEeec
Q 024975 236 EKQPGYDNMWL--HSMVRTKKCS 256 (259)
Q Consensus 236 ~~~~~~~~~~~--~~~v~~~~~~ 256 (259)
+++.+..++.+ ++.|+++...
T Consensus 195 ~~l~~~~gv~i~~~~~v~~i~~~ 217 (325)
T 2q7v_A 195 ARAFANPKMKFIWDTAVEEIQGA 217 (325)
T ss_dssp HHHHTCTTEEEECSEEEEEEEES
T ss_pred HHHHhcCCceEecCCceEEEccC
Confidence 55544445554 4677777653
No 10
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.95 E-value=4.1e-27 Score=186.54 Aligned_cols=173 Identities=23% Similarity=0.258 Sum_probs=126.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
.|||+||||||+|++||.+|+++|++|+|||+. .+||+|.... +.+ .++
T Consensus 6 ~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~-~~gG~~~~~~--------~i~----------------------~~p 54 (312)
T 4gcm_A 6 DFDIAIIGAGPAGMTAAVYASRANLKTVMIERG-IPGGQMANTE--------EVE----------------------NFP 54 (312)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGGCS--------CBC----------------------CST
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEecC-CCCCeeeccc--------ccC----------------------CcC
Confidence 489999999999999999999999999999995 5888876431 100 000
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEc
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlA 161 (259)
.+ ......++.........+.... +.....+...... . ..+...++ ..++||+||+|
T Consensus 55 ~~--------------~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--~-~~~~~~~~----~~~~~d~liiA 111 (312)
T 4gcm_A 55 GF--------------EMITGPDLSTKMFEHAKKFGAV--YQYGDIKSVEDKG--E-YKVINFGN----KELTAKAVIIA 111 (312)
T ss_dssp TC--------------SSBCHHHHHHHHHHHHHHTTCE--EEECCCCEEEECS--S-CEEEECSS----CEEEEEEEEEC
T ss_pred Cc--------------cccchHHHHHHHHHHHhhcccc--ccceeeeeeeeee--c-ceeeccCC----eEEEeceeEEc
Confidence 01 1112356666666666666665 5555554444322 2 23333333 37999999999
Q ss_pred cCCCCCCccCCCCCCCCCCCceEEcccCCCCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 162 NGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 162 tG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
|| +.|+.|++||...+.+...+.....+....++++++|||+|++|+|+|..|.+.+.+||+++|++
T Consensus 112 tG--s~~~~~~ipG~~~~~~~~v~~~~~~~~~~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 178 (312)
T 4gcm_A 112 TG--AEYKKIGVPGEQELGGRGVSYCAVCDGAFFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRD 178 (312)
T ss_dssp CC--EEECCCCCTTTTTTBTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSS
T ss_pred cc--CccCcCCCCChhhhCCccEEeeeccCccccCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeccc
Confidence 99 78999999999887666665544444445567999999999999999999999999999999988
No 11
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.95 E-value=1.6e-27 Score=190.33 Aligned_cols=205 Identities=18% Similarity=0.207 Sum_probs=152.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
++||+|||||++|+++|..|++.|.+|+|+|+.+.+||.|.... .... ...+.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~~~---------------------~~~~------~~~~~ 59 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSALY---------------------PEKY------IYDVA 59 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHHC---------------------TTSE------ECCST
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehhcC---------------------CCce------EeccC
Confidence 37999999999999999999999999999999999999885310 0000 00000
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEc
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlA 161 (259)
.++ .....++..++.+.+.+.+++ ++++++|+++....++.|.|.+.++ .+.+|+||+|
T Consensus 60 ~~~--------------~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~i~~~~~~~~~v~~~~g-----~~~~d~vVlA 118 (332)
T 3lzw_A 60 GFP--------------KIRAQELINNLKEQMAKFDQT--ICLEQAVESVEKQADGVFKLVTNEE-----THYSKTVIIT 118 (332)
T ss_dssp TCS--------------SEEHHHHHHHHHHHHTTSCCE--EECSCCEEEEEECTTSCEEEEESSE-----EEEEEEEEEC
T ss_pred CCC--------------CCCHHHHHHHHHHHHHHhCCc--EEccCEEEEEEECCCCcEEEEECCC-----EEEeCEEEEC
Confidence 111 123488999999999888888 8999999999987644799988764 4899999999
Q ss_pred cCCCC-CCccCCCCCCCCCCCceEEcccCCCCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCCCc----cccc
Q 024975 162 NGHFS-VPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVAD----ETHE 236 (259)
Q Consensus 162 tG~~s-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~~~----~~~~ 236 (259)
||..+ .|+.|.++|...+.+...+. .+......++++++|+|+|.+|+|+|..|.+.+.+|++++|.+.. ...+
T Consensus 119 tG~~~~~p~~~~~~g~~~~~g~~~~~-~~~~~~~~~~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~ 197 (332)
T 3lzw_A 119 AGNGAFKPRKLELENAEQYEGKNLHY-FVDDLQKFAGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRAHEHSVE 197 (332)
T ss_dssp CTTSCCEECCCCCTTGGGGBTTTEES-SCSCGGGGBTCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSSCHHHHH
T ss_pred CCCCcCCCCCCCCCChhhccCceEEE-ecCCHHHcCCCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCccHHHHH
Confidence 99533 78888899988766666665 454445556899999999999999999999999999999998831 1122
Q ss_pred CCCCCCCceE--eeeeeEEeec
Q 024975 237 KQPGYDNMWL--HSMVRTKKCS 256 (259)
Q Consensus 237 ~~~~~~~~~~--~~~v~~~~~~ 256 (259)
++ ...++.+ ++.|++++..
T Consensus 198 ~l-~~~gv~~~~~~~v~~i~~~ 218 (332)
T 3lzw_A 198 NL-HASKVNVLTPFVPAELIGE 218 (332)
T ss_dssp HH-HHSSCEEETTEEEEEEECS
T ss_pred HH-hcCCeEEEeCceeeEEecC
Confidence 22 1224444 3667766653
No 12
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.94 E-value=4e-27 Score=188.44 Aligned_cols=180 Identities=19% Similarity=0.285 Sum_probs=136.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
++||+|||||++|+++|..|.++|++|+|||+++.+||.|.... +. .. .+...
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~----------~~------~~-----------~~~~~ 57 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTALY----------PE------KY-----------IYDVA 57 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHTC----------TT------SE-----------ECCST
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeccC----------CC------ce-----------eeccC
Confidence 37999999999999999999999999999999998998885420 00 00 00000
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEc
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlA 161 (259)
.++ .....++..++.+.+.+.+++ ++++++|+.++..+ +.|.|.+.++. .+.+|+||+|
T Consensus 58 ~~~--------------~~~~~~~~~~l~~~~~~~~~~--~~~~~~v~~i~~~~-~~~~v~~~~g~----~~~~~~lv~A 116 (335)
T 2zbw_A 58 GFP--------------KVYAKDLVKGLVEQVAPFNPV--YSLGERAETLEREG-DLFKVTTSQGN----AYTAKAVIIA 116 (335)
T ss_dssp TCS--------------SEEHHHHHHHHHHHHGGGCCE--EEESCCEEEEEEET-TEEEEEETTSC----EEEEEEEEEC
T ss_pred CCC--------------CCCHHHHHHHHHHHHHHcCCE--EEeCCEEEEEEECC-CEEEEEECCCC----EEEeCEEEEC
Confidence 011 112377888888888888888 88999999999876 57888776554 7999999999
Q ss_pred cCCCC-CCccCCCCCCCCCCCceEEcccCCCCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 162 NGHFS-VPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 162 tG~~s-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
||..+ .|..|.++|...+.+...+.. +.......+++++|||+|.+|+|+|..|.+.+.+|++++|++
T Consensus 117 tG~~~~~p~~~~i~g~~~~~~~~~~~~-~~~~~~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~ 185 (335)
T 2zbw_A 117 AGVGAFEPRRIGAPGEREFEGRGVYYA-VKSKAEFQGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRP 185 (335)
T ss_dssp CTTSEEEECCCCCTTTTTTBTTTEESS-CSCGGGGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSS
T ss_pred CCCCCCCCCCCCCCChhhccCcEEEEe-cCchhhcCCCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCC
Confidence 99533 577778888776654333322 222233457899999999999999999999999999999988
No 13
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.94 E-value=5.3e-27 Score=185.83 Aligned_cols=201 Identities=20% Similarity=0.275 Sum_probs=146.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCC-cEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceecccccccee
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGH-TVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGF 80 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~-~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (259)
|+||+|||||++|+++|..|.+.|. +|+|+|++ .+||.|...... ..+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~-~~gg~~~~~~~~------------------------------~~~ 49 (311)
T 2q0l_A 1 MIDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG-MPGGQITGSSEI------------------------------ENY 49 (311)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS-STTCGGGGCSCB------------------------------CCS
T ss_pred CceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC-CCCccccccccc------------------------------ccC
Confidence 5899999999999999999999999 99999995 577766542100 000
Q ss_pred cCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEE
Q 024975 81 QAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVV 160 (259)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIl 160 (259)
..+ .....+.++.+++.+.+.+.+++ ++. .+|+++...+ +.|.+.+.++. .+.+|+||+
T Consensus 50 ~~~-------------~~~~~~~~~~~~l~~~~~~~~v~--~~~-~~v~~i~~~~-~~~~v~~~~g~----~~~~~~vv~ 108 (311)
T 2q0l_A 50 PGV-------------KEVVSGLDFMQPWQEQCFRFGLK--HEM-TAVQRVSKKD-SHFVILAEDGK----TFEAKSVII 108 (311)
T ss_dssp TTC-------------CSCBCHHHHHHHHHHHHHTTSCE--EEC-SCEEEEEEET-TEEEEEETTSC----EEEEEEEEE
T ss_pred CCC-------------cccCCHHHHHHHHHHHHHHcCCE--EEE-EEEEEEEEcC-CEEEEEEcCCC----EEECCEEEE
Confidence 000 01234478889999988888888 776 7899998876 66888776544 799999999
Q ss_pred ccCCCCCCccCCCCCCCCCCCceEEcccCCCCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCCC----ccccc
Q 024975 161 CNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA----DETHE 236 (259)
Q Consensus 161 AtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~~----~~~~~ 236 (259)
||| +.++.|.++|...+.+...+...........+++++|+|+|.+|+|+|..|.+.+.+|++++|++. +++.+
T Consensus 109 AtG--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~ 186 (311)
T 2q0l_A 109 ATG--GSPKRTGIKGESEYWGKGVSTCATCDGFFYKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFRCAPITLE 186 (311)
T ss_dssp CCC--EEECCCCCBTHHHHBTTTEESCHHHHGGGGTTSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCCSCHHHHH
T ss_pred CCC--CCCCCCCCCChhhccCCcEEEeecCChhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccCCCHHHHH
Confidence 999 677888888875543333433322222234569999999999999999999999999999999883 33444
Q ss_pred CCCCCCCceE--eeeeeEEeec
Q 024975 237 KQPGYDNMWL--HSMVRTKKCS 256 (259)
Q Consensus 237 ~~~~~~~~~~--~~~v~~~~~~ 256 (259)
++.+..++.+ ++.|++++..
T Consensus 187 ~l~~~~gv~v~~~~~v~~i~~~ 208 (311)
T 2q0l_A 187 HAKNNDKIEFLTPYVVEEIKGD 208 (311)
T ss_dssp HHHTCTTEEEETTEEEEEEEEE
T ss_pred HHhhCCCeEEEeCCEEEEEECC
Confidence 5544445655 3667776543
No 14
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.94 E-value=1.4e-26 Score=194.05 Aligned_cols=211 Identities=19% Similarity=0.225 Sum_probs=142.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCC--------------cEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccc
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGH--------------TVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYK 67 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~--------------~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 67 (259)
.+||+|||+||+||++|..|.+.+. ..+.+|+.+.++ |+..... + ...+......
T Consensus 39 i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~--Wh~g~~~--------p-~~~~q~~fl~ 107 (501)
T 4b63_A 39 LHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFA--WHSGMLV--------P-GSKMQISFIK 107 (501)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCC--SSGGGCC--------T-TCBCSSCGGG
T ss_pred cCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCC--cCCCCCC--------C-Cccccccchh
Confidence 4799999999999999999988654 455566655443 3221000 0 0000000111
Q ss_pred ccee-ccccccceecCCCCCcc-CCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCC-------c
Q 024975 68 SLRV-NLPRELMGFQAYPFVAR-NYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESN-------K 138 (259)
Q Consensus 68 ~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~-------~ 138 (259)
.+.. ..|...+.|..+-.... ......+...||++.++.+|+++++++++.. ++++++|++++..+.+ .
T Consensus 108 Dlvtl~~P~s~~sf~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~--vrf~~~V~~v~~~~~~~~~~~~~~ 185 (501)
T 4b63_A 108 DLATLRDPRSSFTFLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDV--VAYGEEVVEVIPGKSDPSSSVVDF 185 (501)
T ss_dssp SSSTTTCTTCTTSHHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGG--EEESEEEEEEEEECSSTTSSCBCE
T ss_pred hhccccCCCCccchHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCc--eEcceEEEeeccccccccccccce
Confidence 1111 11211122211100000 0000124567899999999999999988766 9999999999976532 4
Q ss_pred EEEEEEecC-CceEEEEeCEEEEccCCCCCCccCCCCCCCCCCCceEEcccCCC------CCCCCCCeEEEEccCcCHHH
Q 024975 139 WKVKSRKKD-DVVEEETFDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRI------PNPFQDQVVILIGHYASGLD 211 (259)
Q Consensus 139 ~~v~~~~g~-~~~~~~~ad~VIlAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~------~~~~~~~~v~viG~G~~a~e 211 (259)
|.|++.++. ++...+.|+.||+||| ..|.+| +...+.+..+|+..|.. ...+.+|+|+|||+|.||+|
T Consensus 186 ~~V~~~~~~~g~~~~~~ar~vVlatG--~~P~iP---~~~~~~g~v~Hss~y~~~~~~~~~~~~~gKrV~VVG~G~SA~e 260 (501)
T 4b63_A 186 FTVRSRNVETGEISARRTRKVVIAIG--GTAKMP---SGLPQDPRIIHSSKYCTTLPALLKDKSKPYNIAVLGSGQSAAE 260 (501)
T ss_dssp EEEEEEETTTCCEEEEEEEEEEECCC--CEECCC---TTSCCCTTEEEGGGHHHHHHHHSCCTTSCCEEEEECCSHHHHH
T ss_pred EEEEEecCCCceEEEEEeCEEEECcC--CCCCCC---CCCCCCcceeeccccccchhhccccccCCcEEEEECCcHHHHH
Confidence 999999876 6677899999999999 555555 44456788999988764 45578899999999999999
Q ss_pred HHHHHhcc--cCeEEEEecCC
Q 024975 212 IKRDLAGF--AKEVHIASRSV 230 (259)
Q Consensus 212 ~a~~l~~~--~~~v~~~~r~~ 230 (259)
++.+|++. +.+|++++|++
T Consensus 261 i~~~L~~~~~~~~v~~~~R~~ 281 (501)
T 4b63_A 261 IFHDLQKRYPNSRTTLIMRDS 281 (501)
T ss_dssp HHHHHHHHSTTCEEEEECSSS
T ss_pred HHHHHHhcCCCceEEEEeCCC
Confidence 99999865 67899999997
No 15
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.94 E-value=1.4e-26 Score=182.11 Aligned_cols=196 Identities=14% Similarity=0.180 Sum_probs=142.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceecccccccee
Q 024975 1 MFRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGF 80 (259)
Q Consensus 1 ~~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (259)
|++||+|||||++|+++|..|++.|.+|+|+|+++..+..+... ..
T Consensus 1 m~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~---------------------------------~~- 46 (297)
T 3fbs_A 1 MKFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHS---------------------------------HG- 46 (297)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCC---------------------------------CS-
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhh---------------------------------cC-
Confidence 78999999999999999999999999999999975322111000 00
Q ss_pred cCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHh-CCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEE
Q 024975 81 QAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREF-GVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVV 159 (259)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VI 159 (259)
++ ........++..++.+.+.+. +++ + ...+|+++...+ +.|.+.+.++. .+.||+||
T Consensus 47 --~~-----------~~~~~~~~~~~~~~~~~~~~~~~v~--~-~~~~v~~i~~~~-~~~~v~~~~g~----~~~~d~vv 105 (297)
T 3fbs_A 47 --FL-----------GQDGKAPGEIIAEARRQIERYPTIH--W-VEGRVTDAKGSF-GEFIVEIDGGR----RETAGRLI 105 (297)
T ss_dssp --ST-----------TCTTCCHHHHHHHHHHHHTTCTTEE--E-EESCEEEEEEET-TEEEEEETTSC----EEEEEEEE
T ss_pred --Cc-----------CCCCCCHHHHHHHHHHHHHhcCCeE--E-EEeEEEEEEEcC-CeEEEEECCCC----EEEcCEEE
Confidence 00 111233478888998888776 444 3 456999999876 67999887765 79999999
Q ss_pred EccCCCCCCccCCCCCCCCCCCceEEcccCCCCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCCC---ccccc
Q 024975 160 VCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA---DETHE 236 (259)
Q Consensus 160 lAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~~---~~~~~ 236 (259)
+||| +.|+.|.++|...+.+...+...+.......+++++|+|+|.+|+|+|..|.+.+ +|++++|.+. +.+.+
T Consensus 106 iAtG--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~~~~~~~~~ 182 (297)
T 3fbs_A 106 LAMG--VTDELPEIAGLRERWGSAVFHCPYCHGYELDQGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIVEPDADQHA 182 (297)
T ss_dssp ECCC--CEEECCCCBTTGGGBTTTEESCHHHHTGGGTTCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTCCCCHHHHH
T ss_pred ECCC--CCCCCCCCCCchhhcCCeeEEcccCcchhhcCCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCCCCCHHHHH
Confidence 9999 6788889999887666555555544444556799999999999999999999998 9999999873 22222
Q ss_pred CCCCCCCceEe-eeeeEEee
Q 024975 237 KQPGYDNMWLH-SMVRTKKC 255 (259)
Q Consensus 237 ~~~~~~~~~~~-~~v~~~~~ 255 (259)
.+ ...++.+. +.|++++.
T Consensus 183 ~l-~~~gv~i~~~~v~~i~~ 201 (297)
T 3fbs_A 183 LL-AARGVRVETTRIREIAG 201 (297)
T ss_dssp HH-HHTTCEEECSCEEEEET
T ss_pred HH-HHCCcEEEcceeeeeec
Confidence 22 22344433 56666654
No 16
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.94 E-value=1.2e-26 Score=187.43 Aligned_cols=207 Identities=19% Similarity=0.266 Sum_probs=147.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
++||+|||||++|+++|..|.+.|++|+|||+.+.+||.|.... +.. .. +...
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~----------~~~-----~~------------~~~~ 66 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAALY----------PEK-----HI------------YDVA 66 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTC----------TTS-----EE------------CCST
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccccC----------CCc-----cc------------ccCC
Confidence 47999999999999999999999999999999998998885320 000 00 0000
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEc
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlA 161 (259)
.++ .....++..++.+.+.+.+++ ++++++|+.+...+++.|.|.+.++. .+.+|+||+|
T Consensus 67 ~~~--------------~~~~~~~~~~l~~~~~~~~~~--~~~~~~v~~i~~~~~~~~~v~~~~g~----~~~~~~li~A 126 (360)
T 3ab1_A 67 GFP--------------EVPAIDLVESLWAQAERYNPD--VVLNETVTKYTKLDDGTFETRTNTGN----VYRSRAVLIA 126 (360)
T ss_dssp TCS--------------SEEHHHHHHHHHHHHHTTCCE--EECSCCEEEEEECTTSCEEEEETTSC----EEEEEEEEEC
T ss_pred CCC--------------CCCHHHHHHHHHHHHHHhCCE--EEcCCEEEEEEECCCceEEEEECCCc----EEEeeEEEEc
Confidence 001 112377888888888888888 88999999999875347888887654 7999999999
Q ss_pred cCCCC-CCccCCCCC-CCCCCCceEEcccCCCCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCCC----cccc
Q 024975 162 NGHFS-VPRLAQVPG-IDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA----DETH 235 (259)
Q Consensus 162 tG~~s-~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~~----~~~~ 235 (259)
||..+ .|..|.++| ...+.+...+.. +.......+++++|||+|.+|+|+|..|.+.+.+|++++|++. +.+.
T Consensus 127 tG~~~~~~~~~~i~g~~~~~~~~~v~~~-~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~ 205 (360)
T 3ab1_A 127 AGLGAFEPRKLPQLGNIDHLTGSSVYYA-VKSVEDFKGKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQGHGKTA 205 (360)
T ss_dssp CTTCSCCBCCCGGGCCCTTTBTTTEESS-CSCGGGGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSSCSHHH
T ss_pred cCCCcCCCCCCCCCCchhhCcCceEEEe-cCCHHHcCCCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCCCHHHH
Confidence 99644 566777777 665554433322 2223334678999999999999999999999999999999872 2333
Q ss_pred cCCCC---CCCceE--eeeeeEEeec
Q 024975 236 EKQPG---YDNMWL--HSMVRTKKCS 256 (259)
Q Consensus 236 ~~~~~---~~~~~~--~~~v~~~~~~ 256 (259)
+.+.+ ..++.+ ++.|++++..
T Consensus 206 ~~l~~~~~~~gv~i~~~~~v~~i~~~ 231 (360)
T 3ab1_A 206 HEVERARANGTIDVYLETEVASIEES 231 (360)
T ss_dssp HSSHHHHHHTSEEEESSEEEEEEEEE
T ss_pred HHHHHHhhcCceEEEcCcCHHHhccC
Confidence 33322 123443 4567776543
No 17
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.94 E-value=7e-27 Score=187.10 Aligned_cols=206 Identities=17% Similarity=0.274 Sum_probs=148.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC----CcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccc
Q 024975 1 MFRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE----QVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRE 76 (259)
Q Consensus 1 ~~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~----~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (259)
|++||+|||||++|+++|..|+++|++|+|||+.+ .+||.|....
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~------------------------------- 69 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTT------------------------------- 69 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSS-------------------------------
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccch-------------------------------
Confidence 45899999999999999999999999999999954 6676665421
Q ss_pred cceecCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeC
Q 024975 77 LMGFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFD 156 (259)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad 156 (259)
.+..++ ....+....++..++.+.+.+.+++ ++.++ |+++.... +.|.+.+.... ....+.+|
T Consensus 70 --~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~gv~--i~~~~-v~~i~~~~-~~~~v~~~~~~-~~~~~~~d 132 (338)
T 3itj_A 70 --EIENFP----------GFPDGLTGSELMDRMREQSTKFGTE--IITET-VSKVDLSS-KPFKLWTEFNE-DAEPVTTD 132 (338)
T ss_dssp --EECCST----------TCTTCEEHHHHHHHHHHHHHHTTCE--EECSC-EEEEECSS-SSEEEEETTCS-SSCCEEEE
T ss_pred --hhcccC----------CCcccCCHHHHHHHHHHHHHHcCCE--EEEeE-EEEEEEcC-CEEEEEEEecC-CCcEEEeC
Confidence 000010 0011233488999999999999998 88887 99998765 77888774211 01368999
Q ss_pred EEEEccCCCCCCccCCCCCCCCCCCceEEcccCCCCC--CCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCCC---
Q 024975 157 AVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPN--PFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA--- 231 (259)
Q Consensus 157 ~VIlAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~~--- 231 (259)
+||+||| +.++.|.++|...+.+...+........ ...+++++|||+|.+|+|+|..|.+.+.+|++++|.+.
T Consensus 133 ~vvlAtG--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~ 210 (338)
T 3itj_A 133 AIILATG--ASAKRMHLPGEETYWQKGISACAVCDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA 210 (338)
T ss_dssp EEEECCC--EEECCCCCTTHHHHBTTTEESCHHHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS
T ss_pred EEEECcC--CCcCCCCCCCchhccCccEEEchhcccchhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC
Confidence 9999999 5788888888765444444443322222 34679999999999999999999999999999999983
Q ss_pred -cccccCCCCCCCceE--eeeeeEEeec
Q 024975 232 -DETHEKQPGYDNMWL--HSMVRTKKCS 256 (259)
Q Consensus 232 -~~~~~~~~~~~~~~~--~~~v~~~~~~ 256 (259)
..+.+++.+..++.+ ++.|++++..
T Consensus 211 ~~~~~~~l~~~~gv~i~~~~~v~~i~~~ 238 (338)
T 3itj_A 211 STIMQKRAEKNEKIEILYNTVALEAKGD 238 (338)
T ss_dssp CHHHHHHHHHCTTEEEECSEEEEEEEES
T ss_pred CHHHHHHHHhcCCeEEeecceeEEEEcc
Confidence 233444433335544 4677777654
No 18
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.94 E-value=2.3e-26 Score=182.06 Aligned_cols=201 Identities=19% Similarity=0.207 Sum_probs=146.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
++||+||||||+|+++|..|.+.|.+|+|+|+. +||.|.... .+.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~--~gG~~~~~~---------------------------------~~~ 45 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGER--FGGQILDTV---------------------------------DIE 45 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECSS--TTGGGGGCC---------------------------------EEC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCC--CCceecccc---------------------------------ccc
Confidence 479999999999999999999999999999863 677765310 000
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeC--CCcEEEEEEecCCceEEEEeCEEE
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVE--SNKWKVKSRKKDDVVEEETFDAVV 159 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~--~~~~~v~~~~g~~~~~~~~ad~VI 159 (259)
.+. ...+....++..++.+.+.+.+++ ++.+++|+.+.... ++.|.|.++++. .+.||+||
T Consensus 46 ~~~-----------~~~~~~~~~~~~~~~~~~~~~~v~--~~~~~~v~~i~~~~~~~~~~~v~~~~g~----~~~~~~lv 108 (310)
T 1fl2_A 46 NYI-----------SVPKTEGQKLAGALKVHVDEYDVD--VIDSQSASKLIPAAVEGGLHQIETASGA----VLKARSII 108 (310)
T ss_dssp CBT-----------TBSSEEHHHHHHHHHHHHHTSCEE--EECSCCEEEEECCSSTTCCEEEEETTSC----EEEEEEEE
T ss_pred ccc-----------CcCCCCHHHHHHHHHHHHHHcCCe--EEccCEEEEEEecccCCceEEEEECCCC----EEEeCEEE
Confidence 000 011223478888999999888888 89999999997643 136888887654 78999999
Q ss_pred EccCCCCCCccCCCCCCCCCCCceEEcccCCCCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCCC----cccc
Q 024975 160 VCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA----DETH 235 (259)
Q Consensus 160 lAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~~----~~~~ 235 (259)
+||| +.+..|.++|...+.+...+...........+++++|+|+|.+|+|+|..|.+.+.+|++++|.+. +.+.
T Consensus 109 ~AtG--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~ 186 (310)
T 1fl2_A 109 VATG--AKWRNMNVPGEDQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKADQVLQ 186 (310)
T ss_dssp ECCC--EEECCCCCTTTTTTBTTTEESCHHHHGGGGBTCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCCSCHHHH
T ss_pred ECcC--CCcCCCCCCChhhcccceeEEeccCcHhhcCCCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccCccHHHH
Confidence 9999 567778888887665544443322222234578999999999999999999999999999999983 2333
Q ss_pred cCCCCCCCceE--eeeeeEEeec
Q 024975 236 EKQPGYDNMWL--HSMVRTKKCS 256 (259)
Q Consensus 236 ~~~~~~~~~~~--~~~v~~~~~~ 256 (259)
+++.+..++.+ ++.|+++..+
T Consensus 187 ~~l~~~~gv~v~~~~~v~~i~~~ 209 (310)
T 1fl2_A 187 DKLRSLKNVDIILNAQTTEVKGD 209 (310)
T ss_dssp HHHHTCTTEEEESSEEEEEEEES
T ss_pred HHHhhCCCeEEecCCceEEEEcC
Confidence 44433235554 4677777653
No 19
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.94 E-value=2.3e-25 Score=180.42 Aligned_cols=194 Identities=21% Similarity=0.298 Sum_probs=135.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCC-cEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceecccccccee
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGH-TVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGF 80 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~-~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (259)
++||+|||||++|+++|..|++.|. +|+|||+++ +||.|...+.... .+.. .+ ....+++
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~~~~~~~----------~~~~-~~-------~~~~~g~ 64 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKHWPKSTR----------TITP-SF-------TSNGFGM 64 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHTSCTTCB----------CSSC-CC-------CCGGGTC
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCccccCccccc----------ccCc-ch-------hcccCCc
Confidence 3799999999999999999999999 999999988 9998865321110 0000 00 0000111
Q ss_pred cCCCCCccCCC-CCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEE
Q 024975 81 QAYPFVARNYE-GSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVV 159 (259)
Q Consensus 81 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VI 159 (259)
.++........ .......++.+..+..++.+.+.+.+++ ++++++|+++...+ +.|.|.+.++ .+.||+||
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~--i~~~~~v~~i~~~~-~~~~v~~~~g-----~~~~d~vV 136 (369)
T 3d1c_A 65 PDMNAISMDTSPAFTFNEEHISGETYAEYLQVVANHYELN--IFENTVVTNISADD-AYYTIATTTE-----TYHADYIF 136 (369)
T ss_dssp CCTTCSSTTCCHHHHHCCSSCBHHHHHHHHHHHHHHTTCE--EECSCCEEEEEECS-SSEEEEESSC-----CEEEEEEE
T ss_pred hhhhhccccccccccccccCCCHHHHHHHHHHHHHHcCCe--EEeCCEEEEEEECC-CeEEEEeCCC-----EEEeCEEE
Confidence 00000000000 0001234566788999999999999998 99999999999875 6788887653 48999999
Q ss_pred EccCCCCCCccCCCCCCCCCCCceEEcccCCCCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 160 VCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 160 lAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
+|||+++.| .+|+ +...+...+......++++|+|||+|.+|+|+|..|.+.+.+|++++|++
T Consensus 137 lAtG~~~~p---~ip~-----~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~ 199 (369)
T 3d1c_A 137 VATGDYNFP---KKPF-----KYGIHYSEIEDFDNFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTT 199 (369)
T ss_dssp ECCCSTTSB---CCCS-----SSCEEGGGCSCGGGSCSSEEEEECCSHHHHHHHHHHHHTTCEEEEECC--
T ss_pred ECCCCCCcc---CCCC-----CceechhhcCChhhcCCCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCC
Confidence 999965544 3444 23456666655555577899999999999999999999999999999987
No 20
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.93 E-value=5.2e-26 Score=180.32 Aligned_cols=201 Identities=25% Similarity=0.312 Sum_probs=149.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEE-EeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceecccccccee
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVV-YEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGF 80 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v-~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (259)
++||+|||||++|+++|..|.+.|.+|+| +|+ +.+||.|......
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~~~~~--------------------------------- 49 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITSSSEI--------------------------------- 49 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGGCSCB---------------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeeeecee---------------------------------
Confidence 68999999999999999999999999999 999 6688887642100
Q ss_pred cCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCC-CcEEEEEEecCCceEEEEeCEEE
Q 024975 81 QAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVES-NKWKVKSRKKDDVVEEETFDAVV 159 (259)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~-~~~~v~~~~g~~~~~~~~ad~VI 159 (259)
..++. ...+....++..++.+.+.+.+++ ++.+ +|+++ ..+. +.|.+.+..+. .+.+|+||
T Consensus 50 ~~~~~----------~~~~~~~~~~~~~~~~~~~~~~v~--~~~~-~v~~i-~~~~~~~~~v~~~~~~----~~~~d~lv 111 (315)
T 3r9u_A 50 ENYPG----------VAQVMDGISFMAPWSEQCMRFGLK--HEMV-GVEQI-LKNSDGSFTIKLEGGK----TELAKAVI 111 (315)
T ss_dssp CCSTT----------CCSCBCHHHHHHHHHHHHTTTCCE--EECC-CEEEE-EECTTSCEEEEETTSC----EEEEEEEE
T ss_pred ccCCC----------CCCCCCHHHHHHHHHHHHHHcCcE--EEEE-EEEEE-ecCCCCcEEEEEecCC----EEEeCEEE
Confidence 00010 011234588999999999999998 7777 88888 5431 46775444322 78999999
Q ss_pred EccCCCCCCccCCCCCCCCCCCceEEcccCCCCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCCC----cccc
Q 024975 160 VCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA----DETH 235 (259)
Q Consensus 160 lAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~~----~~~~ 235 (259)
+||| +.++.|.++|...+.+...+...+.......+++++|+|+|.+|+|+|..|.+.+.+|++++|++. +++.
T Consensus 112 lAtG--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~ 189 (315)
T 3r9u_A 112 VCTG--SAPKKAGFKGEDEFFGKGVSTCATCDGFFYKNKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFRAAPSTV 189 (315)
T ss_dssp ECCC--EEECCCCCBTTTTTBTTTEESCHHHHGGGGTTSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCBSCHHHH
T ss_pred EeeC--CCCCCCCCCChhhcCCCeEEeeecccccccCcCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCCCCHHHH
Confidence 9999 678889999988776666665544444445679999999999999999999999999999999883 3344
Q ss_pred cCCCCCCCceE--eeeeeEEeec
Q 024975 236 EKQPGYDNMWL--HSMVRTKKCS 256 (259)
Q Consensus 236 ~~~~~~~~~~~--~~~v~~~~~~ 256 (259)
+++.+..++.+ ++.|++++..
T Consensus 190 ~~~~~~~gv~~~~~~~v~~i~~~ 212 (315)
T 3r9u_A 190 EKVKKNEKIELITSASVDEVYGD 212 (315)
T ss_dssp HHHHHCTTEEEECSCEEEEEEEE
T ss_pred HHHHhcCCeEEEeCcEEEEEEcC
Confidence 44433445554 4777777654
No 21
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.93 E-value=1.3e-25 Score=178.42 Aligned_cols=199 Identities=18% Similarity=0.175 Sum_probs=141.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
.+||+|||||++|+++|..|++.|.+|+|+|+ ..+||.+...... .
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~~~~~~~---------------------------------~ 61 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARSGFSVAILDK-AVAGGLTAEAPLV---------------------------------E 61 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SSTTGGGGGCSCB---------------------------------C
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeC-CCCCccccccchh---------------------------------h
Confidence 37999999999999999999999999999999 4577776542100 0
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEc
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlA 161 (259)
.++. . ......++..++.+.+.+.+++ ++. .+|++++..+ +.|.|.+ ++. .+.+|+||+|
T Consensus 62 ~~~~---------~--~~~~~~~~~~~~~~~~~~~~v~--~~~-~~v~~i~~~~-~~~~v~~-~~~----~~~~~~li~A 121 (319)
T 3cty_A 62 NYLG---------F--KSIVGSELAKLFADHAANYAKI--REG-VEVRSIKKTQ-GGFDIET-NDD----TYHAKYVIIT 121 (319)
T ss_dssp CBTT---------B--SSBCHHHHHHHHHHHHHTTSEE--EET-CCEEEEEEET-TEEEEEE-SSS----EEEEEEEEEC
T ss_pred hcCC---------C--cccCHHHHHHHHHHHHHHcCCE--EEE-eeEEEEEEeC-CEEEEEE-CCC----EEEeCEEEEC
Confidence 0000 0 0123367888888888888887 766 7899998865 6677776 332 6899999999
Q ss_pred cCCCCCCccCCCCCCCCCCCceEEcccCCCCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCCC----cccccC
Q 024975 162 NGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA----DETHEK 237 (259)
Q Consensus 162 tG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~~----~~~~~~ 237 (259)
|| +.++.|.+++...+.+...+...........+++++|+|+|.+|+|+|..|.+.+.+|++++|.+. +.+.++
T Consensus 122 tG--~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~~~~~l~~~ 199 (319)
T 3cty_A 122 TG--TTHKHLGVKGESEYFGKGTSYCSTCDGYLFKGKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYMCENAYVQE 199 (319)
T ss_dssp CC--EEECCCCCBTTTTTBTTTEESCHHHHGGGGBTSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCCSCHHHHHH
T ss_pred CC--CCcccCCCCChHHhCCceEEEEEecchhhcCCCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccCCCHHHHHH
Confidence 99 678888888876654433333222222234568999999999999999999999999999999872 223333
Q ss_pred CC-CCCCceEeeeeeEEeec
Q 024975 238 QP-GYDNMWLHSMVRTKKCS 256 (259)
Q Consensus 238 ~~-~~~~~~~~~~v~~~~~~ 256 (259)
+. ....+..++.|+++...
T Consensus 200 l~~~gv~i~~~~~v~~i~~~ 219 (319)
T 3cty_A 200 IKKRNIPYIMNAQVTEIVGD 219 (319)
T ss_dssp HHHTTCCEECSEEEEEEEES
T ss_pred HhcCCcEEEcCCeEEEEecC
Confidence 32 22344455677777654
No 22
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.93 E-value=6.2e-26 Score=181.49 Aligned_cols=200 Identities=23% Similarity=0.306 Sum_probs=142.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
++||+|||||++|+++|..|.+.|.+|+|+|+. .+||.|...... ..+.
T Consensus 14 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~~------------------------------~~~~ 62 (335)
T 2a87_A 14 VRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGALMTTTDV------------------------------ENYP 62 (335)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCGGGSCSCB------------------------------CCST
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCceeccchh------------------------------hhcC
Confidence 479999999999999999999999999999985 577766532100 0000
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEE-EEEecCCceEEEEeCEEEE
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKV-KSRKKDDVVEEETFDAVVV 160 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v-~~~~g~~~~~~~~ad~VIl 160 (259)
.++ ......++..++.+.+.+.+++ ++.++ |++++. . +.|.| .+.++. .+.||+||+
T Consensus 63 ~~~-------------~~~~~~~~~~~l~~~~~~~~v~--~~~~~-v~~i~~-~-~~~~v~~~~~g~----~~~~d~lvi 120 (335)
T 2a87_A 63 GFR-------------NGITGPELMDEMREQALRFGAD--LRMED-VESVSL-H-GPLKSVVTADGQ----THRARAVIL 120 (335)
T ss_dssp TCT-------------TCBCHHHHHHHHHHHHHHTTCE--EECCC-EEEEEC-S-SSSEEEEETTSC----EEEEEEEEE
T ss_pred CCC-------------CCCCHHHHHHHHHHHHHHcCCE--EEEee-EEEEEe-C-CcEEEEEeCCCC----EEEeCEEEE
Confidence 000 0123377888998888888988 88775 888877 3 66888 665543 799999999
Q ss_pred ccCCCCCCccCCCCCCCCCCCceEEcccCCCCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCCCc----cccc
Q 024975 161 CNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVAD----ETHE 236 (259)
Q Consensus 161 AtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~~~----~~~~ 236 (259)
||| +.+..|.++|...+.+...+...........+++++|||+|.+|+|+|..|.+.+.+|++++|++.. .+.+
T Consensus 121 AtG--~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~~~~~~~~ 198 (335)
T 2a87_A 121 AMG--AAARYLQVPGEQELLGRGVSSCATCDGFFFRDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRASKIMLD 198 (335)
T ss_dssp CCC--EEECCCCCTHHHHTBTTTEESCHHHHGGGGTTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCSSCTTHHH
T ss_pred CCC--CCccCCCCCchHhccCCceEEeeccchhhcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCCccHHHHH
Confidence 999 5778888888665544444433222222245799999999999999999999999999999998832 2333
Q ss_pred CCCCCCCceE--eeeeeEEeec
Q 024975 237 KQPGYDNMWL--HSMVRTKKCS 256 (259)
Q Consensus 237 ~~~~~~~~~~--~~~v~~~~~~ 256 (259)
++++..++.+ ++.|++++..
T Consensus 199 ~~~~~~gV~v~~~~~v~~i~~~ 220 (335)
T 2a87_A 199 RARNNDKIRFLTNHTVVAVDGD 220 (335)
T ss_dssp HHHHCTTEEEECSEEEEEEECS
T ss_pred HHhccCCcEEEeCceeEEEecC
Confidence 3333345554 4677777654
No 23
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.93 E-value=3.4e-25 Score=186.59 Aligned_cols=201 Identities=17% Similarity=0.212 Sum_probs=149.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
.+||+||||||+|+++|.+|++.|.+|+|+|+ .+||.|..... . ..+.
T Consensus 212 ~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~--~~GG~~~~~~~-------------------~-----------~~~~ 259 (521)
T 1hyu_A 212 AYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE--RFGGQVLDTVD-------------------I-----------ENYI 259 (521)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECS--STTGGGTTCSC-------------------B-----------CCBT
T ss_pred cccEEEECCcHHHHHHHHHHHhCCCeEEEEEC--CCCCccccccc-------------------c-----------cccC
Confidence 47999999999999999999999999999987 36777653100 0 0000
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeC--CCcEEEEEEecCCceEEEEeCEEE
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVE--SNKWKVKSRKKDDVVEEETFDAVV 159 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~--~~~~~v~~~~g~~~~~~~~ad~VI 159 (259)
.. .+....++..++.+.+.+.+++ ++.+++|+++.... ++.|.|.+.++. .+.+|+||
T Consensus 260 ~~--------------~~~~~~~l~~~l~~~~~~~gv~--v~~~~~v~~i~~~~~~~~~~~V~~~~g~----~~~~d~vV 319 (521)
T 1hyu_A 260 SV--------------PKTEGQKLAGALKAHVSDYDVD--VIDSQSASKLVPAATEGGLHQIETASGA----VLKARSII 319 (521)
T ss_dssp TB--------------SSBCHHHHHHHHHHHHHTSCEE--EECSCCEEEEECCSSTTSCEEEEETTSC----EEEEEEEE
T ss_pred CC--------------CCCCHHHHHHHHHHHHHHcCCE--EEcCCEEEEEEeccCCCceEEEEECCCC----EEEcCEEE
Confidence 00 1233478889999999888998 99999999997542 136888887654 79999999
Q ss_pred EccCCCCCCccCCCCCCCCCCCceEEcccCCCCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCCC----cccc
Q 024975 160 VCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA----DETH 235 (259)
Q Consensus 160 lAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~~----~~~~ 235 (259)
+||| +.++.|.+||...+.+...+...........+++|+|||+|++|+|+|..|.+.+.+|++++|.+. +.+.
T Consensus 320 lAtG--~~~~~~~ipG~~~~~~~~v~~~~~~~~~~~~~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~~~~~l~ 397 (521)
T 1hyu_A 320 IATG--AKWRNMNVPGEDQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKADQVLQ 397 (521)
T ss_dssp ECCC--EEECCCCCTTTTTTTTTTEECCTTCCGGGGBTSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCCSCHHHH
T ss_pred ECCC--CCcCCCCCCChhhhcCceEEEeecCchhhcCCCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccCcCHHHH
Confidence 9999 567888899988776655554443333344679999999999999999999999999999999883 3344
Q ss_pred cCCCCCCCceE--eeeeeEEeec
Q 024975 236 EKQPGYDNMWL--HSMVRTKKCS 256 (259)
Q Consensus 236 ~~~~~~~~~~~--~~~v~~~~~~ 256 (259)
+++.+..++.+ ++.|+++.+.
T Consensus 398 ~~l~~~~gV~v~~~~~v~~i~~~ 420 (521)
T 1hyu_A 398 DKVRSLKNVDIILNAQTTEVKGD 420 (521)
T ss_dssp HHHTTCTTEEEECSEEEEEEEEC
T ss_pred HHHhcCCCcEEEeCCEEEEEEcC
Confidence 44444345554 4677777653
No 24
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.93 E-value=8.4e-26 Score=179.14 Aligned_cols=181 Identities=18% Similarity=0.280 Sum_probs=127.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
+|||+||||||+|++||.+|+++|++|+|||+.. .||.+.. ++.+.+. .. ..+.
T Consensus 4 ~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~-~gg~~~~---------G~~~~~~---------~i-------~~~~ 57 (314)
T 4a5l_A 4 IHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFM-AGGVAAG---------GQLTTTT---------II-------ENFP 57 (314)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSS-GGGCCTT---------CGGGGSS---------EE-------CCST
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCC-CCCcccC---------CCcCChH---------Hh-------hhcc
Confidence 4899999999999999999999999999999964 4444431 1111000 00 0000
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEc
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlA 161 (259)
.++ ......++...+.+.+.+.+.+ +.. .++....... ..+.+.+.++. .+.||+||+|
T Consensus 58 g~~-------------~~i~~~~l~~~~~~~~~~~~~~--~~~-~~v~~~~~~~-~~~~~~~~~~~----~~~~~~liiA 116 (314)
T 4a5l_A 58 GFP-------------NGIDGNELMMNMRTQSEKYGTT--IIT-ETIDHVDFST-QPFKLFTEEGK----EVLTKSVIIA 116 (314)
T ss_dssp TCT-------------TCEEHHHHHHHHHHHHHHTTCE--EEC-CCEEEEECSS-SSEEEEETTCC----EEEEEEEEEC
T ss_pred CCc-------------ccCCHHHHHHHHHHHHhhcCcE--EEE-eEEEEeecCC-CceEEEECCCe----EEEEeEEEEc
Confidence 111 1122367888888888888876 544 4566665554 55666665544 8999999999
Q ss_pred cCCCCCCccCCCCCCCCCCCceEEcccCCCC--CCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCCC
Q 024975 162 NGHFSVPRLAQVPGIDSWPGKQMHSHNYRIP--NPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA 231 (259)
Q Consensus 162 tG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~~ 231 (259)
|| +.|+.|.+||.+.+.....+...+... ....+++++|||+|++|+|+|..|.+.|.+||+++|.+.
T Consensus 117 TG--~~~~~~~ipG~~~~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~ 186 (314)
T 4a5l_A 117 TG--ATAKRMHVPGEDKYWQNGVSACAICDGAVPIFRNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDA 186 (314)
T ss_dssp CC--EEECCCCCTTHHHHBTTTEESCHHHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred cc--ccccccCCCccccccccceeeehhhhhhhhhcCCCeEEEECCChHHHHHHHHHHHhCCeeeeeccccc
Confidence 99 789999999977554444444333222 224578999999999999999999999999999999883
No 25
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.93 E-value=1.2e-25 Score=179.69 Aligned_cols=200 Identities=17% Similarity=0.221 Sum_probs=142.0
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEee----CCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccc
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEK----GEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELM 78 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~----~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (259)
+||+|||||++|+++|..|.+.|++|+|+|+ ...+||.+..... ..
T Consensus 9 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~------------------------------~~ 58 (333)
T 1vdc_A 9 TRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTD------------------------------VE 58 (333)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCSE------------------------------EC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeeccc------------------------------cc
Confidence 6999999999999999999999999999998 3444544432100 00
Q ss_pred eecCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEE
Q 024975 79 GFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAV 158 (259)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~V 158 (259)
.+..++ ....+.++..++.+.+.+.+++ ++.++ |++++... +.|.|.+ ++ ..+.+|+|
T Consensus 59 ~~~~~~-------------~~~~~~~~~~~l~~~~~~~gv~--~~~~~-v~~i~~~~-~~~~v~~-~~----~~~~~~~v 116 (333)
T 1vdc_A 59 NFPGFP-------------EGILGVELTDKFRKQSERFGTT--IFTET-VTKVDFSS-KPFKLFT-DS----KAILADAV 116 (333)
T ss_dssp CSTTCT-------------TCEEHHHHHHHHHHHHHHTTCE--EECCC-CCEEECSS-SSEEEEC-SS----EEEEEEEE
T ss_pred cCCCCc-------------cCCCHHHHHHHHHHHHHHCCCE--EEEeE-EEEEEEcC-CEEEEEE-CC----cEEEcCEE
Confidence 000011 0112367888898888888998 88775 88888765 6788877 33 37999999
Q ss_pred EEccCCCCCCccCCCCCCCC----CCCceEEcccCCCCCC--CCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCCC-
Q 024975 159 VVCNGHFSVPRLAQVPGIDS----WPGKQMHSHNYRIPNP--FQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA- 231 (259)
Q Consensus 159 IlAtG~~s~~~~~~~~g~~~----~~~~~~~~~~~~~~~~--~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~~- 231 (259)
|+||| +.+..|.++|... +.+...+......... ..+++|+|+|+|.+|+|+|..|.+.+.+|++++|++.
T Consensus 117 v~A~G--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~ 194 (333)
T 1vdc_A 117 ILAIG--AVAKRLSFVGSGEVLGGFWNRGISACAVCDGAAPIFRNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAF 194 (333)
T ss_dssp EECCC--EEECCCCCBTCSSSSSCCBTTTEESCHHHHTTSGGGTTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred EECCC--CCcCCCCCCCccccccccccCcEEEeccCccchhhcCCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcC
Confidence 99999 5677888888765 4444444332222222 4578999999999999999999999999999999983
Q ss_pred ---cccccCCCCCCCceE--eeeeeEEeec
Q 024975 232 ---DETHEKQPGYDNMWL--HSMVRTKKCS 256 (259)
Q Consensus 232 ---~~~~~~~~~~~~~~~--~~~v~~~~~~ 256 (259)
+.+.+++++..++.+ ++.|++++..
T Consensus 195 ~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~ 224 (333)
T 1vdc_A 195 RASKIMQQRALSNPKIDVIWNSSVVEAYGD 224 (333)
T ss_dssp CSCHHHHHHHHTCTTEEEECSEEEEEEEES
T ss_pred CccHHHHHHHHhCCCeeEecCCceEEEeCC
Confidence 233334444445655 4677777654
No 26
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.93 E-value=5.6e-26 Score=189.37 Aligned_cols=211 Identities=21% Similarity=0.239 Sum_probs=137.9
Q ss_pred CeEEEECCChHHHHHHHHHHHcC-----CcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccce-eccccc
Q 024975 3 RHVAVIGAGAAGLVVGHELLREG-----HTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLR-VNLPRE 76 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g-----~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 76 (259)
+||+|||||++|+++|..|++.| .+|+|||+.+.+| |....... .. .+.......+. ...+..
T Consensus 31 ~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g--~~~~~~~~----~~-----~~~~~~~~~l~~~~~p~~ 99 (463)
T 3s5w_A 31 HDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYR--WHGNTLVS----QS-----ELQISFLKDLVSLRNPTS 99 (463)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCC--SSGGGCCS----SC-----BCSSCTTSSSSTTTCTTC
T ss_pred CCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCC--CcCCCCCC----CC-----cCCcchhhccccccCCCC
Confidence 59999999999999999999999 9999999998876 32210000 00 00000000000 001111
Q ss_pred cceecCCCCCccC-CCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeC--CCcE--EEEEEecCCceE
Q 024975 77 LMGFQAYPFVARN-YEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVE--SNKW--KVKSRKKDDVVE 151 (259)
Q Consensus 77 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~--~~~~--~v~~~~g~~~~~ 151 (259)
.+.+..+...... .....+...|+.+.++..|+.+.+.+++.+ ++++++|++++..+ ++.| .|.+.++.++..
T Consensus 100 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~ 177 (463)
T 3s5w_A 100 PYSFVNYLHKHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQ--SRYGEEVLRIEPMLSAGQVEALRVISRNADGEEL 177 (463)
T ss_dssp TTSHHHHHHHTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTT--EEESEEEEEEEEEEETTEEEEEEEEEEETTSCEE
T ss_pred CCChhHhhhhcCceeecccccCCCCCHHHHHHHHHHHHHHcCCe--EEeCCEEEEEEEecCCCceEEEEEEEecCCCceE
Confidence 1111100000000 000123456778899999999999888888 99999999998762 2444 677777655555
Q ss_pred EEEeCEEEEccCCCCCCccCCCCCCCCCCC--ceEEcccCCCC-CCC-----CCCeEEEEccCcCHHHHHHHHhcc--cC
Q 024975 152 EETFDAVVVCNGHFSVPRLAQVPGIDSWPG--KQMHSHNYRIP-NPF-----QDQVVILIGHYASGLDIKRDLAGF--AK 221 (259)
Q Consensus 152 ~~~ad~VIlAtG~~s~~~~~~~~g~~~~~~--~~~~~~~~~~~-~~~-----~~~~v~viG~G~~a~e~a~~l~~~--~~ 221 (259)
.+.||+||+||| +.|.+|.. ...+.+ ...+...+... ..+ .+++|+|||+|.+|+|+|..|.+. +.
T Consensus 178 ~~~~d~lVlAtG--~~p~~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~sg~e~a~~l~~~~~~~ 253 (463)
T 3s5w_A 178 VRTTRALVVSPG--GTPRIPQV--FRALKGDGRVFHHSQYLEHMAKQPCSSGKPMKIAIIGGGQSAAEAFIDLNDSYPSV 253 (463)
T ss_dssp EEEESEEEECCC--CEECCCGG--GGGGTTCTTEEEGGGHHHHHCC-------CEEEEEECCSHHHHHHHHHHHHHCTTE
T ss_pred EEEeCEEEECCC--CCCCCcch--hhhcCCCCcEEECHHHHhhHHHhhhcccCCCeEEEECCCHhHHHHHHHHHhcCCCC
Confidence 899999999999 56666651 233334 45666554331 222 578999999999999999999998 88
Q ss_pred eEEEEecCC
Q 024975 222 EVHIASRSV 230 (259)
Q Consensus 222 ~v~~~~r~~ 230 (259)
+|++++|++
T Consensus 254 ~Vt~v~r~~ 262 (463)
T 3s5w_A 254 QADMILRAS 262 (463)
T ss_dssp EEEEECSSS
T ss_pred eEEEEEeCC
Confidence 999999998
No 27
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.93 E-value=1.8e-25 Score=176.48 Aligned_cols=174 Identities=18% Similarity=0.243 Sum_probs=124.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
.|||+||||||+|++||.+|+++|++|+|||++. +||.+... +. .+.
T Consensus 6 ~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~-~gg~~~~~---------------------~~-----------~~~ 52 (304)
T 4fk1_A 6 YIDCAVIGAGPAGLNASLVLGRARKQIALFDNNT-NRNRVTQN---------------------SH-----------GFI 52 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC-CGGGGSSC---------------------BC-----------CST
T ss_pred CcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC-CCCeeeee---------------------cC-----------Ccc
Confidence 4899999999999999999999999999999964 45543221 00 000
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEc
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlA 161 (259)
..+ -....++.....+.+.+++.. .+...++..+...+.+.+++.+.++. .+.||+||+|
T Consensus 53 ~~~--------------~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~g~----~~~a~~liiA 112 (304)
T 4fk1_A 53 TRD--------------GIKPEEFKEIGLNEVMKYPSV--HYYEKTVVMITKQSTGLFEIVTKDHT----KYLAERVLLA 112 (304)
T ss_dssp TCT--------------TBCHHHHHHHHHHHHTTSTTE--EEEECCEEEEEECTTSCEEEEETTCC----EEEEEEEEEC
T ss_pred CCC--------------CCCHHHHHHHHHHHHHhcCCE--EEEeeEEEEeeecCCCcEEEEECCCC----EEEeCEEEEc
Confidence 000 011255666555555555554 55666777777766577888887765 8999999999
Q ss_pred cCCCCCCccCCCCCCCCCCCceEEcccCCCCCCCCCCeEEEEccCcC-HHHHHHHHhcccCeEEEEecCC
Q 024975 162 NGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYAS-GLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 162 tG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~-a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
|| +.|+.|++||...+.+...+...........+++++|||+|.. ++|++..+.+.+.+|+++.|.+
T Consensus 113 TG--s~p~~p~i~G~~~~~~~~v~~~~~~~~~~~~~~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~ 180 (304)
T 4fk1_A 113 TG--MQEEFPSIPNVREYYGKSLFSCPYCDGWELKDQPLIIISENEDHTLHMTKLVYNWSTDLVIATNGN 180 (304)
T ss_dssp CC--CEEECCSCTTHHHHBTTTEESCHHHHSGGGTTSCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSC
T ss_pred cC--CccccccccCccccccceeeeccccchhHhcCCceeeecCCCchhhhHHHHHHhCCceEEEEeccc
Confidence 99 7899999999876555545444433333445677888888865 5788888888899999998887
No 28
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.93 E-value=9.1e-26 Score=179.39 Aligned_cols=200 Identities=17% Similarity=0.262 Sum_probs=140.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
++||+|||||++|+++|..|.+.|.+|+|+|+. .+||.|...... ..+.
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~~------------------------------~~~~ 53 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARANLQPVLITGM-EKGGQLTTTTEV------------------------------ENWP 53 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS-STTGGGGGCSBC------------------------------CCST
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC-CCCceEecchhh------------------------------hhCC
Confidence 479999999999999999999999999999974 577776542100 0000
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEc
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlA 161 (259)
.++ ....+.++..++.+.+.+.+++ ++.++ |+.++... +.|.+ +.++. .+.+|+||+|
T Consensus 54 ~~~-------------~~~~~~~~~~~~~~~~~~~~~~--~~~~~-v~~i~~~~-~~~~v-~~~~~----~~~~~~lv~A 111 (320)
T 1trb_A 54 GDP-------------NDLTGPLLMERMHEHATKFETE--IIFDH-INKVDLQN-RPFRL-NGDNG----EYTCDALIIA 111 (320)
T ss_dssp TCC-------------SSCBHHHHHHHHHHHHHHTTCE--EECCC-EEEEECSS-SSEEE-EESSC----EEEEEEEEEC
T ss_pred CCC-------------CCCCHHHHHHHHHHHHHHCCCE--EEEee-eeEEEecC-CEEEE-EeCCC----EEEcCEEEEC
Confidence 010 0122367888888888888988 87775 88888765 67888 55544 7999999999
Q ss_pred cCCCCCCccCCCCCCCCCCCceEEcccCCCCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCCC----cccccC
Q 024975 162 NGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA----DETHEK 237 (259)
Q Consensus 162 tG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~~----~~~~~~ 237 (259)
|| +.+..|.++|...+.+...+...........+++++|||+|.+|+|+|..|.+.+.+|++++|++. +.+.+.
T Consensus 112 tG--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~ 189 (320)
T 1trb_A 112 TG--ASARYLGLPSEEAFKGRGVSACATSDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRAEKILIKR 189 (320)
T ss_dssp CC--EEECCCCCHHHHHTBTTTEESCHHHHGGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCCCHHHHHH
T ss_pred CC--CCcCCCCCCChHHhCCceeEecccCCccccCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccccCHHHHHH
Confidence 99 567788888765544333433322222224578999999999999999999999999999999883 223323
Q ss_pred CC---CCCCceE--eeeeeEEeec
Q 024975 238 QP---GYDNMWL--HSMVRTKKCS 256 (259)
Q Consensus 238 ~~---~~~~~~~--~~~v~~~~~~ 256 (259)
+. +..++.+ ++.|++++..
T Consensus 190 l~~~l~~~gv~i~~~~~v~~i~~~ 213 (320)
T 1trb_A 190 LMDKVENGNIILHTNRTLEEVTGD 213 (320)
T ss_dssp HHHHHHTSSEEEECSCEEEEEEEC
T ss_pred HHHhcccCCeEEEcCceeEEEEcC
Confidence 21 1234544 4677777654
No 29
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.90 E-value=7.2e-24 Score=177.68 Aligned_cols=201 Identities=19% Similarity=0.206 Sum_probs=119.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCcccc-ccccceecccccccee
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSS-LYKSLRVNLPRELMGF 80 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 80 (259)
.+||+||||||+|+++|..|+++|.+|+|||+.+.+||+|... ++.|.+.++... .+..+...........
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~--------gciP~k~l~~~~~~~~~~~~~~~~~g~~~ 96 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNV--------GCIPSKALLHASEMFHQAQHGLEALGVEV 96 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHH--------SHHHHHHHHHHHHHHHHHHHSSGGGTEEC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccc--------cchhhHHHHHHHHHHHHHHhhHhhcCccc
Confidence 4899999999999999999999999999999999999998754 222221111111 1111110000000000
Q ss_pred cCCCCCccCCCCCCCCCCCCCH----HHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeC
Q 024975 81 QAYPFVARNYEGSVDLRRYPGH----EEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFD 156 (259)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad 156 (259)
...... +....... ..+...+.....+.+++ +..+.. .. .+.+.+.|...+ +....+.+|
T Consensus 97 ~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~g~~-~~---~~~~~~~v~~~~--g~~~~~~~d 160 (491)
T 3urh_A 97 ANPKLN--------LQKMMAHKDATVKSNVDGVSFLFKKNKID--GFQGTG-KV---LGQGKVSVTNEK--GEEQVLEAK 160 (491)
T ss_dssp CCCEEC--------HHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EEESEE-EE---CSSSEEEEECTT--SCEEEEECS
T ss_pred CCCccC--------HHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEEEE-EE---ecCCEEEEEeCC--CceEEEEeC
Confidence 000000 00000000 12223334445556777 655543 22 222445555433 334579999
Q ss_pred EEEEccCCCCCCccCCCCCCCC-CCCceEEcccCCCCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 157 AVVVCNGHFSVPRLAQVPGIDS-WPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 157 ~VIlAtG~~s~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
+||+||| +.| +.+||... +.+...+...........+++++|||+|++|+|+|..|.+.+.+|++++|.+
T Consensus 161 ~lViATG--s~p--~~ipg~~~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 231 (491)
T 3urh_A 161 NVVIATG--SDV--AGIPGVEVAFDEKTIVSSTGALALEKVPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLD 231 (491)
T ss_dssp EEEECCC--EEC--CCBTTBCCCCCSSSEECHHHHTSCSSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred EEEEccC--CCC--CCCCCcccccCCeeEEehhHhhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccc
Confidence 9999999 444 45666652 3344344443333334456899999999999999999999999999999987
No 30
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=99.90 E-value=5.3e-25 Score=183.38 Aligned_cols=213 Identities=18% Similarity=0.166 Sum_probs=132.4
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccc-cccceeccccccceec
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSL-YKSLRVNLPRELMGFQ 81 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 81 (259)
+||+|||||++|+++|..|++.|.+|+|+|+.+.+||.|... ++.|.+.++.... +..+.. .+.
T Consensus 5 ~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~--------gciPsk~l~~~a~~~~~~~~-~~~------ 69 (466)
T 3l8k_A 5 YDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYS--------GCVPSKTVREVIQTAWRLTN-IAN------ 69 (466)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHH--------SHHHHHHHHHHHHHHHHHHH-HHC------
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCccccc--------CCCchHHHHHHHHHHHHHHh-ccc------
Confidence 799999999999999999999999999999989999998753 2222211111110 000000 000
Q ss_pred CCCCCccCCCCCCCCCCCC----CHHHHH-----HHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEE
Q 024975 82 AYPFVARNYEGSVDLRRYP----GHEEVL-----RYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEE 152 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~----~~~~~~-----~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~ 152 (259)
.+ ....++ ....+. .++...+.+.+++ +..+ ++..+. . +.+.|...++. ...
T Consensus 70 -~~----------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~--~~~g-~v~~id--~-~~~~V~~~~g~--~~~ 130 (466)
T 3l8k_A 70 -VK----------IPLDFSTVQDRKDYVQELRFKQHKRNMSQYETLT--FYKG-YVKIKD--P-THVIVKTDEGK--EIE 130 (466)
T ss_dssp -SC----------CCCCHHHHHHHHHHHHHHHHHHHHHHHTTCTTEE--EESE-EEEEEE--T-TEEEEEETTSC--EEE
T ss_pred -CC----------CCcCHHHHHHHHHhheeccccchHHHHHHhCCCE--EEEe-EEEEec--C-CeEEEEcCCCc--EEE
Confidence 00 000010 001121 3333334444666 5544 566654 2 56777666543 223
Q ss_pred EEeCEEEEccCCCCCCccCCCCCCCCCCCceEEcccCC---CCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecC
Q 024975 153 ETFDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYR---IPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRS 229 (259)
Q Consensus 153 ~~ad~VIlAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~ 229 (259)
+.||+||+||| +.|..|.++|.+. ......+. ......+++++|||+|++|+|+|..|.+.+.+|++++|.
T Consensus 131 ~~~d~lviAtG--~~p~~p~i~G~~~----~~t~~~~~~~~~~l~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~ 204 (466)
T 3l8k_A 131 AETRYMIIASG--AETAKLRLPGVEY----CLTSDDIFGYKTSFRKLPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEML 204 (466)
T ss_dssp EEEEEEEECCC--EEECCCCCTTGGG----SBCHHHHHSTTCSCCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred EecCEEEECCC--CCccCCCCCCccc----eEeHHHHHHHHHHHhhCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeC
Confidence 99999999999 7888999998762 12222222 112234589999999999999999999999999999998
Q ss_pred C-------CcccccCCCCC--CCceEeeeeeEEee
Q 024975 230 V-------ADETHEKQPGY--DNMWLHSMVRTKKC 255 (259)
Q Consensus 230 ~-------~~~~~~~~~~~--~~~~~~~~v~~~~~ 255 (259)
+ ++++.+.+.+. ..+..++.|++++.
T Consensus 205 ~~~l~~~~d~~~~~~l~~~l~v~i~~~~~v~~i~~ 239 (466)
T 3l8k_A 205 DRALITLEDQDIVNTLLSILKLNIKFNSPVTEVKK 239 (466)
T ss_dssp SSSCTTSCCHHHHHHHHHHHCCCEECSCCEEEEEE
T ss_pred CcCCCCCCCHHHHHHHHhcCEEEEEECCEEEEEEE
Confidence 7 22233222111 45555677777765
No 31
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=99.89 E-value=7.1e-23 Score=169.97 Aligned_cols=198 Identities=16% Similarity=0.131 Sum_probs=127.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHc--CCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccc
Q 024975 1 MFRHVAVIGAGAAGLVVGHELLRE--GHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELM 78 (259)
Q Consensus 1 ~~~~v~IIG~G~~Gl~~a~~L~~~--g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (259)
|++||+|||||++|+++|..|++. +.+|+|||+++.+|...... . .+. .
T Consensus 1 M~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~----------~---------~~~--~-------- 51 (452)
T 3oc4_A 1 MSLKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGL----------S---------AYF--N-------- 51 (452)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC------------------------------------
T ss_pred CCCCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccc----------h---------hhh--c--------
Confidence 568999999999999999999998 89999999988665110000 0 000 0
Q ss_pred eecCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEE
Q 024975 79 GFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAV 158 (259)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~V 158 (259)
... ....++...+.+.+.+.+++ ++++++|++++... +.+.+... .....+.+|++
T Consensus 52 ----~~~--------------~~~~~~~~~~~~~~~~~gi~--~~~~~~V~~id~~~-~~v~v~~~---~~~~~~~~d~l 107 (452)
T 3oc4_A 52 ----HTI--------------NELHEARYITEEELRRQKIQ--LLLNREVVAMDVEN-QLIAWTRK---EEQQWYSYDKL 107 (452)
T ss_dssp ---------------------------CCCCHHHHHHTTEE--EECSCEEEEEETTT-TEEEEEET---TEEEEEECSEE
T ss_pred ----CCC--------------CCHHHhhcCCHHHHHHCCCE--EEECCEEEEEECCC-CEEEEEec---CceEEEEcCEE
Confidence 000 00011111122334567887 88899999998765 55666411 12257999999
Q ss_pred EEccCCCCCCccCCCCCCCCCCCceEEcccCCCCCC-----CCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCCC--
Q 024975 159 VVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNP-----FQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA-- 231 (259)
Q Consensus 159 IlAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~-----~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~~-- 231 (259)
|+||| +.|..|+++|... ........+..... ..+++++|||+|++|+|+|..+.+.+.+|+++.|.+.
T Consensus 108 viAtG--~~p~~p~i~g~~~--~~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 183 (452)
T 3oc4_A 108 ILATG--ASQFSTQIRGSQT--EKLLKYKFLSGALAAVPLLENSQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLL 183 (452)
T ss_dssp EECCC--CCBCCCCCBTTTC--TTEEEGGGCC----CCHHHHTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS
T ss_pred EECCC--cccCCCCCCCCCC--CCEEEeCCHHHHHHHHHHHhcCCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccc
Confidence 99999 7888898888764 22333333322211 2468999999999999999999999999999999872
Q ss_pred -----ccccc---CCCCCCCce--EeeeeeEEee
Q 024975 232 -----DETHE---KQPGYDNMW--LHSMVRTKKC 255 (259)
Q Consensus 232 -----~~~~~---~~~~~~~~~--~~~~v~~~~~ 255 (259)
+++.+ +.++..++. .++.|++++.
T Consensus 184 ~~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~ 217 (452)
T 3oc4_A 184 PKYFDKEMVAEVQKSLEKQAVIFHFEETVLGIEE 217 (452)
T ss_dssp TTTCCHHHHHHHHHHHHTTTEEEEETCCEEEEEE
T ss_pred cccCCHHHHHHHHHHHHHcCCEEEeCCEEEEEEc
Confidence 12111 112233444 4577888773
No 32
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.89 E-value=1.1e-23 Score=174.94 Aligned_cols=196 Identities=17% Similarity=0.211 Sum_probs=122.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCcccc-ccccceecccccccee
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSS-LYKSLRVNLPRELMGF 80 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 80 (259)
++||+|||||++|+++|..|++.|.+|+|+|+. .+||.|... ++.|.+.++... .+..+. ........+
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~~~--------g~~p~k~l~~~~~~~~~~~-~~~~~g~~~ 72 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCLNV--------GCIPSKALISASHRYEQAK-HSEEMGIKA 72 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHT--------SHHHHHHHHHHHHHHHHHH-TCGGGTEEC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCcCc--------CchhhHHHHHHHHHHHHHH-HHHhcCccc
Confidence 589999999999999999999999999999998 788888643 222211111100 011110 000000000
Q ss_pred cCCCCCccCCCCCCCCCCCCCH----HHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeC
Q 024975 81 QAYPFVARNYEGSVDLRRYPGH----EEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFD 156 (259)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad 156 (259)
..... .+...+... ..+...+.+.+.+.+++ ++.++.+. + ++ +.+.+.+.++. ..+.+|
T Consensus 73 ~~~~~--------~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~--~~~g~~~~-i--d~-~~v~V~~~~G~---~~i~~d 135 (455)
T 1ebd_A 73 ENVTI--------DFAKVQEWKASVVKKLTGGVEGLLKGNKVE--IVKGEAYF-V--DA-NTVRVVNGDSA---QTYTFK 135 (455)
T ss_dssp CSCEE--------CHHHHHHHHHHHHHHHHHHHHHHHHTTTCE--EEESEEEE-E--ET-TEEEEEETTEE---EEEECS
T ss_pred CCCcc--------CHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEEEEEE-c--cC-CeEEEEeCCCc---EEEEeC
Confidence 00000 000000000 12334456666677888 77776543 3 23 55777664431 468999
Q ss_pred EEEEccCCCCCCccCCCCCCCCCCCceEEcccCCCCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 157 AVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 157 ~VIlAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
+||+||| +.|..|.++|.+. ...+........ ..+++++|||+|++|+|+|..|.+.|.+|++++|.+
T Consensus 136 ~lViATG--s~p~~~~~~g~~~---~v~~~~~~~~~~-~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 203 (455)
T 1ebd_A 136 NAIIATG--SRPIELPNFKFSN---RILDSTGALNLG-EVPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAG 203 (455)
T ss_dssp EEEECCC--EEECCBTTBCCCS---SEECHHHHHTCS-SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred EEEEecC--CCCCCCCCCCccc---eEecHHHHhccc-cCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Confidence 9999999 6788888777543 233333322222 235899999999999999999999999999999987
No 33
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.89 E-value=8e-24 Score=177.23 Aligned_cols=193 Identities=16% Similarity=0.195 Sum_probs=117.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEee--------CCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceecc
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEK--------GEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNL 73 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~--------~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (259)
.|||+||||||+|+++|..|++.|.+|+|+|+ ...+||+|... +|.|.+.+.............
T Consensus 6 ~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~--------gciPsk~l~~~~~~~~~~~~~ 77 (488)
T 3dgz_A 6 SFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNV--------GCIPKKLMHQAALLGGMIRDA 77 (488)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHH--------SHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeeccc--------CCcccHHHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999997 45688888654 333322221111111000000
Q ss_pred ccccceecCCCCCccCCCCCCCCCCCCCHHHHHHH-----------HHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEE
Q 024975 74 PRELMGFQAYPFVARNYEGSVDLRRYPGHEEVLRY-----------LQNFAREFGVDQVVRLHTEVLNARLVESNKWKVK 142 (259)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~ 142 (259)
..+.+... .........+..+ +...+...+++ +.. .++..+ +...+.+.
T Consensus 78 -------~~~g~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~--~i~-g~~~~~---~~~~v~v~ 137 (488)
T 3dgz_A 78 -------HHYGWEVA-------QPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVK--YFN-IKASFV---DEHTVRGV 137 (488)
T ss_dssp -------HHTTCCCC-------SSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EEC-CEEEES---SSSEEEEE
T ss_pred -------HhcCcccC-------CcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEE-EEEEEc---cCCeEEEE
Confidence 01111000 0011122333322 22233445666 443 333332 22334444
Q ss_pred EEecCCceEEEEeCEEEEccCCCCCCccCC-CCCCCCCCCceEEcccCCCCCCCCCCeEEEEccCcCHHHHHHHHhcccC
Q 024975 143 SRKKDDVVEEETFDAVVVCNGHFSVPRLAQ-VPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAK 221 (259)
Q Consensus 143 ~~~g~~~~~~~~ad~VIlAtG~~s~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~ 221 (259)
.. ++....+.||+||+||| +.|..|. +||.... ..++..+.... ..+++++|||+|++|+|+|..|.+.+.
T Consensus 138 ~~--~g~~~~~~~d~lViATG--s~p~~p~~i~G~~~~---~~~~~~~~~~~-~~~~~vvViGgG~ig~E~A~~l~~~g~ 209 (488)
T 3dgz_A 138 DK--GGKATLLSAEHIVIATG--GRPRYPTQVKGALEY---GITSDDIFWLK-ESPGKTLVVGASYVALECAGFLTGIGL 209 (488)
T ss_dssp CT--TSCEEEEEEEEEEECCC--EEECCCSSCBTHHHH---CBCHHHHTTCS-SCCCSEEEECCSHHHHHHHHHHHHTTC
T ss_pred eC--CCceEEEECCEEEEcCC--CCCCCCCCCCCcccc---cCcHHHHHhhh-hcCCeEEEECCCHHHHHHHHHHHHcCC
Confidence 33 33345799999999999 7888888 8886431 12222232222 235789999999999999999999999
Q ss_pred eEEEEecCC
Q 024975 222 EVHIASRSV 230 (259)
Q Consensus 222 ~v~~~~r~~ 230 (259)
+|++++|.+
T Consensus 210 ~Vtlv~~~~ 218 (488)
T 3dgz_A 210 DTTVMMRSI 218 (488)
T ss_dssp CEEEEESSC
T ss_pred ceEEEEcCc
Confidence 999999976
No 34
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=99.88 E-value=1.1e-23 Score=175.82 Aligned_cols=200 Identities=15% Similarity=0.115 Sum_probs=122.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCcccc-cccccee-ccccccce
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSS-LYKSLRV-NLPRELMG 79 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~ 79 (259)
++||+|||||++|+++|..|++.|.+|+|+|+++.+||.|... ++.|.+.++... .+..+.. ... .++
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~--------g~~Psk~l~~~~~~~~~~~~~~~~--~~g 75 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNV--------GCIPSKALLNNSHYYHMAHGTDFA--SRG 75 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHHH--------SHHHHHHHHHHHHHHHHHHSSHHH--HTT
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCccccc--------CccchHHHHHHHHHHHHhhhhhHh--hCc
Confidence 4799999999999999999999999999999998899998653 222211111110 0000000 000 000
Q ss_pred ecCCCCCccCCCCCCCCCCCCCHHH----HHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEe
Q 024975 80 FQAYPFVARNYEGSVDLRRYPGHEE----VLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETF 155 (259)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~a 155 (259)
+..... .. .+...+....+ +...+.+.+.+.+++ ++.++. ..+ +. +.+.|.+.++ ....+.|
T Consensus 76 ~~~~~~-~~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~--~~~g~~-~~~--~~-~~~~v~~~~g--g~~~~~~ 141 (474)
T 1zmd_A 76 IEMSEV-RL-----NLDKMMEQKSTAVKALTGGIAHLFKQNKVV--HVNGYG-KIT--GK-NQVTATKADG--GTQVIDT 141 (474)
T ss_dssp EEESCE-EE-----CHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EEESEE-EEE--ET-TEEEEECTTS--CEEEEEE
T ss_pred cccCCC-cc-----CHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEEEE-EEe--cC-CEEEEEecCC--CcEEEEe
Confidence 000000 00 00000000011 222335556667888 777754 333 23 5566665431 1247999
Q ss_pred CEEEEccCCCCCCccCCCCCCCCCCCceEEcccCCCCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 156 DAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 156 d~VIlAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
|+||+||| +.|..|.++|.+.. ...++..+..... .+++++|||+|++|+|+|..|.+.+.+|++++|.+
T Consensus 142 d~lViAtG--s~p~~p~i~g~~~~--~v~t~~~~~~~~~-~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 211 (474)
T 1zmd_A 142 KNILIATG--SEVTPFPGITIDED--TIVSSTGALSLKK-VPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLG 211 (474)
T ss_dssp EEEEECCC--EEECCCTTCCCCSS--SEECHHHHTTCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CEEEECCC--CCCCCCCCCCCCcC--cEEcHHHHhhccc-cCceEEEECCCHHHHHHHHHHHHcCCEEEEEeccC
Confidence 99999999 67888888886531 2344433333222 35899999999999999999999999999999987
No 35
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=99.88 E-value=4.4e-24 Score=178.02 Aligned_cols=202 Identities=17% Similarity=0.156 Sum_probs=123.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCcccc-ccccceeccccccce
Q 024975 1 MFRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSS-LYKSLRVNLPRELMG 79 (259)
Q Consensus 1 ~~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 79 (259)
|++||+|||||++|+++|.+|++.|.+|+|+|+.+.+||.|... ++.|.+.++... .+..+..........
T Consensus 1 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~--------g~~psk~l~~~~~~~~~~~~~~~~~g~~ 72 (468)
T 2qae_A 1 NPYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNV--------GCIPSKALLHATHLYHDAHANFARYGLM 72 (468)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHH--------SHHHHHHHHHHHHHHHHHHHTHHHHTEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCCc--------CcHhHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 57899999999999999999999999999999998899998643 222211111100 000100000000000
Q ss_pred ecCCCCCccCCCCCCCCCCCCCH----HHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEe
Q 024975 80 FQAYPFVARNYEGSVDLRRYPGH----EEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETF 155 (259)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~a 155 (259)
....... .+...+... ..+...+...+.+.+++ ++.++.+ .+ +. +.+.+.+.++ ....+.+
T Consensus 73 ~~~~~~~-------~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~--~~~g~~~-~i--~~-~~~~v~~~~G--~~~~~~~ 137 (468)
T 2qae_A 73 GGEGVTM-------DSAKMQQQKERAVKGLTGGVEYLFKKNKVT--YYKGEGS-FE--TA-HSIRVNGLDG--KQEMLET 137 (468)
T ss_dssp CGGGCEE-------CHHHHHHHHHHHHHHHHHHHHHHHHHHTCE--EEEEEEE-EE--ET-TEEEEEETTS--CEEEEEE
T ss_pred cCCCCcc-------CHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEEEEE-Ee--eC-CEEEEEecCC--ceEEEEc
Confidence 0000000 000000000 12333445566677888 7777543 33 23 5566665443 2247999
Q ss_pred CEEEEccCCCCCCccCCCCCCCCCCCceEEcccCCCCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 156 DAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 156 d~VIlAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
|+||+||| +.|..|+++|.+. . .......+.... ..+++++|||+|++|+|+|..|.+.+.+|++++|.+
T Consensus 138 d~lviAtG--~~p~~p~~~g~~~-~-~v~t~~~~~~~~-~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 207 (468)
T 2qae_A 138 KKTIIATG--SEPTELPFLPFDE-K-VVLSSTGALALP-RVPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAP 207 (468)
T ss_dssp EEEEECCC--EEECCBTTBCCCS-S-SEECHHHHHTCS-SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CEEEECCC--CCcCCCCCCCCCc-C-ceechHHHhhcc-cCCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCC
Confidence 99999999 6788888777643 1 233333332222 245899999999999999999999999999999987
No 36
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.88 E-value=1.1e-23 Score=176.84 Aligned_cols=199 Identities=14% Similarity=0.124 Sum_probs=121.7
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC--------CcCceeeeCCCCCCCCCCCCCCCCCccccccc-cceecc
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE--------QVGGSWIYTSETESDPLGVDPNRYPVHSSLYK-SLRVNL 73 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~--------~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 73 (259)
||++|||+||+|+.+|.++++.|.+|+|+|+.. .+||+|... +|.|++.++.+.... .+....
T Consensus 43 YDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtCln~--------GCIPsK~L~~aa~~~~~~~~~~ 114 (542)
T 4b1b_A 43 YDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNV--------GCVPKKLMHYAGHMGSIFKLDS 114 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHHHHH--------SHHHHHHHHHHHHHHHHHHHTG
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCccccc--------chHHHHHHHHHHHHHHHHHhhh
Confidence 899999999999999999999999999999743 479999776 777766555543222 221111
Q ss_pred ccccceecC--CCCCccCCCCCCCCCCCCCH----HHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecC
Q 024975 74 PRELMGFQA--YPFVARNYEGSVDLRRYPGH----EEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKD 147 (259)
Q Consensus 74 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~ 147 (259)
......+.. ..|... .... ..+.......+++.+++ +..+ ...-+. .+...|......
T Consensus 115 ~~~Gi~~~~~~~d~~~~----------~~~~~~~v~~l~~~~~~~l~~~~V~--~i~G-~a~f~~---~~~v~V~~~~~~ 178 (542)
T 4b1b_A 115 KAYGWKFDNLKHDWKKL----------VTTVQSHIRSLNFSYMTGLRSSKVK--YING-LAKLKD---KNTVSYYLKGDL 178 (542)
T ss_dssp GGGTEEEEEEEECHHHH----------HHHHHHHHHHHHHHHHHHHHHTTCE--EECE-EEEEEE---TTEEEEEEC--C
T ss_pred HhcCcccCcccccHHHH----------HHHHHHHHHHHHHHHHHHHHhCCCE--EEee-eEEEcC---CCcceEeecccC
Confidence 111111111 011000 0000 11222223334455776 5443 222221 244555554433
Q ss_pred CceEEEEeCEEEEccCCCCCCccCCCCCCCCCCCceEEcccCCCCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEe
Q 024975 148 DVVEEETFDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIAS 227 (259)
Q Consensus 148 ~~~~~~~ad~VIlAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~ 227 (259)
+..+.++++++|+||| +.|.+|+..+... .....+..+..... .+++++|||+|++|+|+|..+.++|.+||++.
T Consensus 179 ~~~~~i~a~~iiIATG--s~P~~P~~~~~~~--~~~~ts~~~l~l~~-lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~ 253 (542)
T 4b1b_A 179 SKEETVTGKYILIATG--CRPHIPDDVEGAK--ELSITSDDIFSLKK-DPGKTLVVGASYVALECSGFLNSLGYDVTVAV 253 (542)
T ss_dssp CCEEEEEEEEEEECCC--EEECCCSSSBTHH--HHCBCHHHHTTCSS-CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEE
T ss_pred CceEEEeeeeEEeccC--CCCCCCCcccCCC--ccccCchhhhcccc-CCceEEEECCCHHHHHHHHHHHhcCCeEEEec
Confidence 4456899999999999 8888886443321 01122333333323 34889999999999999999999999999998
Q ss_pred cCC
Q 024975 228 RSV 230 (259)
Q Consensus 228 r~~ 230 (259)
|..
T Consensus 254 ~~~ 256 (542)
T 4b1b_A 254 RSI 256 (542)
T ss_dssp SSC
T ss_pred ccc
Confidence 866
No 37
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.88 E-value=1.8e-23 Score=175.47 Aligned_cols=220 Identities=17% Similarity=0.199 Sum_probs=123.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceecccccccee
Q 024975 1 MFRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGF 80 (259)
Q Consensus 1 ~~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (259)
|++||+|||||++|+++|..|++.|.+|+|||++ .+||.|... ++.|.+.+..............
T Consensus 1 m~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~c~~~--------gc~P~k~l~~~a~~~~~~~~~~------ 65 (500)
T 1onf_A 1 MVYDLIVIGGGSGGMAAARRAARHNAKVALVEKS-RLGGTCVNV--------GCVPKKIMFNAASVHDILENSR------ 65 (500)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-STTHHHHHT--------SHHHHHHHHHHHHHHHHHHHGG------
T ss_pred CccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCC-CcCcccccc--------CCcchHHHHHHHHHHHHHHhhH------
Confidence 6799999999999999999999999999999998 489988653 2222111111100000000000
Q ss_pred cCCCCCccCCCCCCCCCCCC----CH----HHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEe-------
Q 024975 81 QAYPFVARNYEGSVDLRRYP----GH----EEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRK------- 145 (259)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~----~~----~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~------- 145 (259)
.+.+... ....++ .. ..+...+...+.+.+++ ++.++. ..++ . +.+.+....
T Consensus 66 -~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~--~~~g~~-~~id--~-~~v~v~~~~~~~~~~~ 132 (500)
T 1onf_A 66 -HYGFDTK------FSFNLPLLVERRDKYIQRLNNIYRQNLSKDKVD--LYEGTA-SFLS--E-NRILIKGTKDNNNKDN 132 (500)
T ss_dssp -GGTCCCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EEESCC-CCC---------------------
T ss_pred -hcCCccC------CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEeEE-EEee--C-CEEEEEeccccccccc
Confidence 0111000 000010 00 12223344555667887 766643 3332 1 334443200
Q ss_pred cCCceEEEEeCEEEEccCCCCCCccCCCCCCCCCCCceEEcccCCCCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEE
Q 024975 146 KDDVVEEETFDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHI 225 (259)
Q Consensus 146 g~~~~~~~~ad~VIlAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~ 225 (259)
.++....+.||+||+||| +.|..|.++|.+. ..++..+..... +++++|||+|++|+|+|..|.+.+.+|++
T Consensus 133 ~~~~~~~~~~d~lViAtG--s~p~~p~i~G~~~----~~~~~~~~~~~~--~~~vvViGgG~ig~E~A~~l~~~g~~Vtl 204 (500)
T 1onf_A 133 GPLNEEILEGRNILIAVG--NKPVFPPVKGIEN----TISSDEFFNIKE--SKKIGIVGSGYIAVELINVIKRLGIDSYI 204 (500)
T ss_dssp --------CBSSEEECCC--CCBCCCSCTTGGG----CEEHHHHTTCCC--CSEEEEECCSHHHHHHHHHHHTTTCEEEE
T ss_pred cCCCceEEEeCEEEECCC--CCCCCCCCCCCCc----ccCHHHHhccCC--CCeEEEECChHHHHHHHHHHHHcCCeEEE
Confidence 000013689999999999 7888888888642 344444433332 68999999999999999999999999999
Q ss_pred EecCCC------cccccCC---CCCCCce--EeeeeeEEeec
Q 024975 226 ASRSVA------DETHEKQ---PGYDNMW--LHSMVRTKKCS 256 (259)
Q Consensus 226 ~~r~~~------~~~~~~~---~~~~~~~--~~~~v~~~~~~ 256 (259)
++|.+. +++.+.+ ++..++. .++.|++++..
T Consensus 205 v~~~~~~l~~~d~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~ 246 (500)
T 1onf_A 205 FARGNRILRKFDESVINVLENDMKKNNINIVTFADVVEIKKV 246 (500)
T ss_dssp ECSSSSSCTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEES
T ss_pred EecCCccCcccchhhHHHHHHHHHhCCCEEEECCEEEEEEEc
Confidence 999872 2222211 2222444 45677777653
No 38
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.88 E-value=5.4e-24 Score=177.66 Aligned_cols=226 Identities=16% Similarity=0.143 Sum_probs=135.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCcccc-ccccceecccccccee
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSS-LYKSLRVNLPRELMGF 80 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 80 (259)
++||+|||||++|+++|..|++.|.+|+|+|+.+.+||.|... ++.|.+.++... .+..+..........+
T Consensus 6 ~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~--------g~~p~k~l~~~~~~~~~~~~~~~~~g~~~ 77 (470)
T 1dxl_A 6 ENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNV--------GCIPSKALLHSSHMYHEAKHSFANHGVKV 77 (470)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHH--------SHHHHHHHHHHHHHHHHHHHTHHHHTEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCc--------CccchHHHHHHHHHHHHHHHHHHhcCccc
Confidence 5899999999999999999999999999999998899988643 222211111100 0111100000000000
Q ss_pred cCCCCCccCCCCCCCCCCCCCH----HHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeC
Q 024975 81 QAYPFVARNYEGSVDLRRYPGH----EEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFD 156 (259)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad 156 (259)
..... .+...+... ..+...+...+.+.+++ ++.++.+. + +. +.+.|.+.++ ....+.+|
T Consensus 78 ~~~~~--------~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~--~~~g~~~~-~--~~-~~~~v~~~~G--~~~~i~~d 141 (470)
T 1dxl_A 78 SNVEI--------DLAAMMGQKDKAVSNLTRGIEGLFKKNKVT--YVKGYGKF-V--SP-SEISVDTIEG--ENTVVKGK 141 (470)
T ss_dssp SCEEE--------CHHHHHHHHHHHHHHHHHHHHHHHHHHTCE--EEESCEEE-E--ET-TEEEECCSSS--CCEEEECS
T ss_pred CCCcc--------CHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEeEEEE-e--cC-CEEEEEeCCC--ceEEEEcC
Confidence 00000 000000000 22334455666677888 88876553 3 33 5566665443 12479999
Q ss_pred EEEEccCCCCCCccCCCCCCCCCCCceEEcccCCCCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCCC-----
Q 024975 157 AVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA----- 231 (259)
Q Consensus 157 ~VIlAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~~----- 231 (259)
+||+||| +.|..|.++|.+.. ...+........ ..+++++|||+|++|+|+|..|.+.+.+|++++|.+.
T Consensus 142 ~lIiAtG--s~p~~p~~~g~~~~--~v~~~~~~~~~~-~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~~ 216 (470)
T 1dxl_A 142 HIIIATG--SDVKSLPGVTIDEK--KIVSSTGALALS-EIPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPTM 216 (470)
T ss_dssp EEEECCC--EEECCBTTBCCCSS--SEECHHHHTTCS-SCCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSSTTS
T ss_pred EEEECCC--CCCCCCCCCCCCcc--cEEeHHHhhhhh-hcCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccccc
Confidence 9999999 67888887775431 233333333222 2458999999999999999999999999999999872
Q ss_pred -ccccc----CCC-CCCCceEeeeeeEEeec
Q 024975 232 -DETHE----KQP-GYDNMWLHSMVRTKKCS 256 (259)
Q Consensus 232 -~~~~~----~~~-~~~~~~~~~~v~~~~~~ 256 (259)
+++.+ .+. ....+..++.|++++..
T Consensus 217 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~ 247 (470)
T 1dxl_A 217 DAEIRKQFQRSLEKQGMKFKLKTKVVGVDTS 247 (470)
T ss_dssp CHHHHHHHHHHHHHSSCCEECSEEEEEEECS
T ss_pred cHHHHHHHHHHHHHcCCEEEeCCEEEEEEEc
Confidence 22221 121 12344555677777653
No 39
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=99.88 E-value=2e-23 Score=175.87 Aligned_cols=193 Identities=18% Similarity=0.236 Sum_probs=117.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC--------CcCceeeeCCCCCCCCCCCCCCCCCccccccccceecc
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE--------QVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNL 73 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~--------~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (259)
.+||+||||||+|+++|..|++.|.+|+|||+.+ .+||+|... +|.|.+.+............
T Consensus 32 ~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~--------GciPsk~l~~~~~~~~~~~~- 102 (519)
T 3qfa_A 32 DYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNV--------GCIPKKLMHQAALLGQALQD- 102 (519)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHH--------SHHHHHHHHHHHHHHHHHHH-
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCc--------CccchHHHHHHHHHHHHHHH-
Confidence 3799999999999999999999999999999964 678888654 33332221111111100000
Q ss_pred ccccceecCCCCCccCCCCCCCCCCCCCHHHHHHHH-----------HHHHHHhCCceeEEeceeEEEEEEeCCCcEEEE
Q 024975 74 PRELMGFQAYPFVARNYEGSVDLRRYPGHEEVLRYL-----------QNFAREFGVDQVVRLHTEVLNARLVESNKWKVK 142 (259)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-----------~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~ 142 (259)
+..+.+... .........+..+. ...+...+++ +..+ ++..+. . ..+.|.
T Consensus 103 ------~~~~g~~~~-------~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~--~i~g-~a~~~d--~-~~v~v~ 163 (519)
T 3qfa_A 103 ------SRNYGWKVE-------ETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVV--YENA-YGQFIG--P-HRIKAT 163 (519)
T ss_dssp ------HHHTTBCCC-------SSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EECS-EEEEEE--T-TEEEEE
T ss_pred ------HHhcCcccC-------CcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEE-EEEEee--C-CEEEEE
Confidence 001111100 00111123333322 2233445776 5443 444432 2 344454
Q ss_pred EEecCCceEEEEeCEEEEccCCCCCCccCCCCCCCCCCCceEEcccCCCCCCCCCCeEEEEccCcCHHHHHHHHhcccCe
Q 024975 143 SRKKDDVVEEETFDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKE 222 (259)
Q Consensus 143 ~~~g~~~~~~~~ad~VIlAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~ 222 (259)
..+ ++...+.||+||+||| +.|..|.++|...+ ...+..+.... ..+++++|||+|++|+|+|..|.+.+.+
T Consensus 164 ~~~--g~~~~i~~d~lViATG--s~p~~p~i~G~~~~---~~t~~~~~~l~-~~~~~vvVIGgG~ig~E~A~~l~~~G~~ 235 (519)
T 3qfa_A 164 NNK--GKEKIYSAERFLIATG--ERPRYLGIPGDKEY---CISSDDLFSLP-YCPGKTLVVGASYVALECAGFLAGIGLD 235 (519)
T ss_dssp CTT--CCCCEEEEEEEEECCC--EEECCCCCTTHHHH---CBCHHHHTTCS-SCCCSEEEECCSHHHHHHHHHHHHTTCC
T ss_pred cCC--CCEEEEECCEEEEECC--CCcCCCCCCCccCc---eEcHHHHhhhh-hcCCeEEEECCcHHHHHHHHHHHHcCCe
Confidence 433 3334799999999999 78888888885431 22222332222 2346799999999999999999999999
Q ss_pred EEEEecCC
Q 024975 223 VHIASRSV 230 (259)
Q Consensus 223 v~~~~r~~ 230 (259)
|++++|..
T Consensus 236 Vtlv~~~~ 243 (519)
T 3qfa_A 236 VTVMVRSI 243 (519)
T ss_dssp EEEEESSC
T ss_pred EEEEeccc
Confidence 99999864
No 40
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.88 E-value=2.1e-23 Score=174.53 Aligned_cols=217 Identities=19% Similarity=0.215 Sum_probs=127.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeC---C------CcCceeeeCCCCCCCCCCCCCCCCCccccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKG---E------QVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVN 72 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~---~------~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (259)
.|||+||||||+|+++|.+|++.|.+|+|+|+. + .+||+|... +|.|.+.+............
T Consensus 9 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~--------gciPsk~l~~~~~~~~~~~~ 80 (483)
T 3dgh_A 9 DYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNV--------GCIPKKLMHQASLLGEAVHE 80 (483)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHH--------SHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeeccc--------CchhhHHHHHHHHHHHHHHH
Confidence 589999999999999999999999999999942 1 378888653 33332211111111000000
Q ss_pred cccccceecCCCCCccCCCCCCCCCCCCCHHHHHHHHH-----------HHHHHhCCceeEEeceeEEEEEEeCCCcEEE
Q 024975 73 LPRELMGFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQ-----------NFAREFGVDQVVRLHTEVLNARLVESNKWKV 141 (259)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----------~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v 141 (259)
.. .+.+.. ..........+..+.. ..+...+++ +..+ .+..+. . ..+.+
T Consensus 81 ~~-------~~g~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~g-~a~~~~--~-~~v~v 140 (483)
T 3dgh_A 81 AA-------AYGWNV-------DDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVE--YING-LGSFVD--S-HTLLA 140 (483)
T ss_dssp HH-------HTTBCC-------CCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EECS-EEEEEE--T-TEEEE
T ss_pred HH-------hcCccc-------CCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEe-EEEEcc--C-CEEEE
Confidence 00 011100 0001112233333222 223345666 4443 333322 2 44555
Q ss_pred EEEecCCceEEEEeCEEEEccCCCCCCccCCCCCCCCCCCceEEcccCCCCCCCCCCeEEEEccCcCHHHHHHHHhcccC
Q 024975 142 KSRKKDDVVEEETFDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAK 221 (259)
Q Consensus 142 ~~~~g~~~~~~~~ad~VIlAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~ 221 (259)
...++. ..+.+|+||+||| +.|..|.++|...+ ..++..+... ...+++++|||+|++|+|+|..|.+.+.
T Consensus 141 ~~~~g~---~~~~~d~lviATG--s~p~~p~i~G~~~~---~~~~~~~~~~-~~~~~~vvViGgG~~g~E~A~~l~~~g~ 211 (483)
T 3dgh_A 141 KLKSGE---RTITAQTFVIAVG--GRPRYPDIPGAVEY---GITSDDLFSL-DREPGKTLVVGAGYIGLECAGFLKGLGY 211 (483)
T ss_dssp ECTTCC---EEEEEEEEEECCC--EEECCCSSTTHHHH---CBCHHHHTTC-SSCCCEEEEECCSHHHHHHHHHHHHTTC
T ss_pred EeCCCe---EEEEcCEEEEeCC--CCcCCCCCCCcccc---cCcHHHHhhh-hhcCCcEEEECCCHHHHHHHHHHHHcCC
Confidence 544432 5799999999999 78888988887432 1222222222 2245889999999999999999999999
Q ss_pred eEEEEecCC-----Cccccc----CCC-CCCCceEeeeeeEEee
Q 024975 222 EVHIASRSV-----ADETHE----KQP-GYDNMWLHSMVRTKKC 255 (259)
Q Consensus 222 ~v~~~~r~~-----~~~~~~----~~~-~~~~~~~~~~v~~~~~ 255 (259)
+|++++|.. ++++.+ .+. ....++.++.|++++.
T Consensus 212 ~Vtlv~~~~~l~~~d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~ 255 (483)
T 3dgh_A 212 EPTVMVRSIVLRGFDQQMAELVAASMEERGIPFLRKTVPLSVEK 255 (483)
T ss_dssp EEEEEESSCSSTTSCHHHHHHHHHHHHHTTCCEEETEEEEEEEE
T ss_pred EEEEEeCCCCCcccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEE
Confidence 999999864 222222 221 2245555677777765
No 41
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.88 E-value=4.5e-23 Score=172.45 Aligned_cols=199 Identities=17% Similarity=0.191 Sum_probs=119.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCcccc-ccccceecccccccee
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSS-LYKSLRVNLPRELMGF 80 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 80 (259)
.+||+|||||++|+++|..|++.|.+|+|+|+++.+||.|... ++.|.+.++... .+..+. .... +
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~--------g~~psk~ll~~~~~~~~~~-~~~~--~-- 72 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNV--------GCIPSKALLHNAAVIDEVR-HLAA--N-- 72 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHHH--------SHHHHHHHHHHHHHHHHHH-HGGG--G--
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceeee--------cccchHHHHHHHHHHHHHH-HHHh--C--
Confidence 3799999999999999999999999999999988899887542 121111111100 011110 0000 0
Q ss_pred cCCCCCccCCCCCCCCCCCCCH----HHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEec--------CC
Q 024975 81 QAYPFVARNYEGSVDLRRYPGH----EEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKK--------DD 148 (259)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g--------~~ 148 (259)
..++.... ..+....... ..+...+...+.+.+++ ++.++.+. ..+ +.+.+...++ ++
T Consensus 73 -gi~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~--~~~g~~~~---~~~-~~v~v~~~~g~~~~~~~~~g 142 (482)
T 1ojt_A 73 -GIKYPEPE---LDIDMLRAYKDGVVSRLTGGLAGMAKSRKVD--VIQGDGQF---LDP-HHLEVSLTAGDAYEQAAPTG 142 (482)
T ss_dssp -TCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EEEEEEEE---EET-TEEEEEEEEEEETTEEEEEE
T ss_pred -CcccCCCc---cCHHHHHHHHHHHHHHHHHHHHHHHHhCCcE--EEeeEEEE---ccC-CEEEEEecCCcccccccccC
Confidence 01100000 0000000000 11222344555667888 77776544 233 5677765443 12
Q ss_pred ceEEEEeCEEEEccCCCCCCccCC-CCCCCCCCCceEEcccCCCCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEe
Q 024975 149 VVEEETFDAVVVCNGHFSVPRLAQ-VPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIAS 227 (259)
Q Consensus 149 ~~~~~~ad~VIlAtG~~s~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~ 227 (259)
+...+.||+||+||| +.|..|+ ++ ... ...+........ ..+++++|||+|++|+|+|..|.+.|.+|++++
T Consensus 143 ~~~~i~ad~lViAtG--s~p~~~~~i~-~~~---~v~~~~~~~~~~-~~~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~ 215 (482)
T 1ojt_A 143 EKKIVAFKNCIIAAG--SRVTKLPFIP-EDP---RIIDSSGALALK-EVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVE 215 (482)
T ss_dssp EEEEEEEEEEEECCC--EEECCCSSCC-CCT---TEECHHHHTTCC-CCCSEEEEESCSHHHHHHHHHHHHHTCEEEEEC
T ss_pred cceEEEcCEEEECCC--CCCCCCCCCC-ccC---cEEcHHHHhccc-ccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEE
Confidence 224789999999999 5676665 44 221 233333333322 236899999999999999999999999999999
Q ss_pred cCC
Q 024975 228 RSV 230 (259)
Q Consensus 228 r~~ 230 (259)
|.+
T Consensus 216 ~~~ 218 (482)
T 1ojt_A 216 MMD 218 (482)
T ss_dssp SSS
T ss_pred ECC
Confidence 987
No 42
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.88 E-value=3.7e-23 Score=172.95 Aligned_cols=199 Identities=16% Similarity=0.209 Sum_probs=119.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccc-cccccceecccccccee
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHS-SLYKSLRVNLPRELMGF 80 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 80 (259)
++||+||||||+|+++|..|++.|.+|+|+|+.+.+||.|... ++.|.+.++.. ..+..+..........+
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~--------g~~psk~l~~~~~~~~~~~~~~~~~gi~~ 76 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNV--------GCIPSKALLNNSHLFHQMHTEAQKRGIDV 76 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHH--------SHHHHHHHHHHHHHHHHHHHTSGGGTEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCcccee--------ccHHHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 3799999999999999999999999999999988899988643 22221111111 01111110000001100
Q ss_pred -cCCCCCccCCCCCCCCCCCCCH----HHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEE---
Q 024975 81 -QAYPFVARNYEGSVDLRRYPGH----EEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEE--- 152 (259)
Q Consensus 81 -~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~--- 152 (259)
...... +....... ..+...+.+.+.+.+++ ++.++.+.. +.+.+.|.+.++. ...
T Consensus 77 ~~~~~~~--------~~~~~~~~~~~~~~l~~~~~~~~~~~gv~--~~~g~~~~~----~~~~v~V~~~~G~--~~~~~~ 140 (478)
T 1v59_A 77 NGDIKIN--------VANFQKAKDDAVKQLTGGIELLFKKNKVT--YYKGNGSFE----DETKIRVTPVDGL--EGTVKE 140 (478)
T ss_dssp CSCEEEC--------HHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EEESEEEES----SSSEEEEECCTTC--TTCCSS
T ss_pred CCCCccC--------HHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEEEEEEc----cCCeEEEEecCCC--cccccc
Confidence 000000 00000000 12223344556667888 888776542 2256777665441 124
Q ss_pred ---EEeCEEEEccCCCCCCccCCCCCCCCCCC-ceEEcccCCCCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEec
Q 024975 153 ---ETFDAVVVCNGHFSVPRLAQVPGIDSWPG-KQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASR 228 (259)
Q Consensus 153 ---~~ad~VIlAtG~~s~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r 228 (259)
+.||+||+||| +.|+ .+||.. +.+ ...++........ .+++++|||+|++|+|+|..|.+.|.+|++++|
T Consensus 141 ~~~i~~d~lViAtG--s~p~--~~~g~~-~~~~~v~~~~~~~~~~~-~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~ 214 (478)
T 1v59_A 141 DHILDVKNIIVATG--SEVT--PFPGIE-IDEEKIVSSTGALSLKE-IPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEF 214 (478)
T ss_dssp CEEEEEEEEEECCC--EEEC--CCTTCC-CCSSSEECHHHHTTCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred cceEEeCEEEECcC--CCCC--CCCCCC-CCCceEEcHHHHHhhhc-cCceEEEECCCHHHHHHHHHHHHcCCEEEEEEe
Confidence 89999999999 4442 345543 223 2333333333222 368999999999999999999999999999999
Q ss_pred CC
Q 024975 229 SV 230 (259)
Q Consensus 229 ~~ 230 (259)
.+
T Consensus 215 ~~ 216 (478)
T 1v59_A 215 QP 216 (478)
T ss_dssp SS
T ss_pred CC
Confidence 88
No 43
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=99.88 E-value=3.5e-23 Score=173.03 Aligned_cols=187 Identities=15% Similarity=0.204 Sum_probs=116.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
++||+|||||++|+++|..|++.|.+|+|+|++ .+||+|... +|.|.+.++............ .
T Consensus 20 ~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~-~~GG~~~~~--------gc~p~k~l~~~~~~~~~~~~~-------~ 83 (478)
T 3dk9_A 20 SYDYLVIGGGSGGLASARRAAELGARAAVVESH-KLGGTCVNV--------GCVPKKVMWNTAVHSEFMHDH-------A 83 (478)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHH--------SHHHHHHHHHHHHHHHHHTTT-------T
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCccccc--------CccchHHHHHHHHHHHHHHHH-------H
Confidence 479999999999999999999999999999986 689988653 222221111111000000000 0
Q ss_pred CCCCCccCCCCCCCCCCCCCHHH-----------HHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCce
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEE-----------VLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVV 150 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~ 150 (259)
.+.+.. ......... +...+...+...+++ +..+. +..+ +...+.+.. ++
T Consensus 84 ~~g~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~--~~~g~-~~~~---~~~~~~v~~-~g---- 144 (478)
T 3dk9_A 84 DYGFPS--------CEGKFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIE--IIRGH-AAFT---SDPKPTIEV-SG---- 144 (478)
T ss_dssp TTTSCC--------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EEESC-EEEC---SCSSCEEEE-TT----
T ss_pred hcCccC--------CCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcE--EEEeE-EEEe---eCCeEEEEE-CC----
Confidence 011100 001111122 223334444555777 55553 3322 224466663 22
Q ss_pred EEEEeCEEEEccCCCCCCccC---CCCCCCCCCCceEEcccCCCCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEe
Q 024975 151 EEETFDAVVVCNGHFSVPRLA---QVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIAS 227 (259)
Q Consensus 151 ~~~~ad~VIlAtG~~s~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~ 227 (259)
..+.||+||+||| +.|..| .++|... ..++..+.... ..+++++|||+|++|+|+|..|.+.+.+|++++
T Consensus 145 ~~~~~d~lviAtG--~~p~~p~~~~i~G~~~----~~~~~~~~~~~-~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~ 217 (478)
T 3dk9_A 145 KKYTAPHILIATG--GMPSTPHESQIPGASL----GITSDGFFQLE-ELPGRSVIVGAGYIAVEMAGILSALGSKTSLMI 217 (478)
T ss_dssp EEEECSCEEECCC--EEECCCCTTTSTTGGG----SBCHHHHTTCC-SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred EEEEeeEEEEccC--CCCCCCCcCCCCCCce----eEchHHhhchh-hcCccEEEECCCHHHHHHHHHHHHcCCeEEEEE
Confidence 3799999999999 788888 7888652 12223333222 235899999999999999999999999999999
Q ss_pred cCC
Q 024975 228 RSV 230 (259)
Q Consensus 228 r~~ 230 (259)
|.+
T Consensus 218 ~~~ 220 (478)
T 3dk9_A 218 RHD 220 (478)
T ss_dssp SSS
T ss_pred eCC
Confidence 987
No 44
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=99.87 E-value=8e-23 Score=169.56 Aligned_cols=195 Identities=22% Similarity=0.352 Sum_probs=124.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHc--CCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccce
Q 024975 2 FRHVAVIGAGAAGLVVGHELLRE--GHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMG 79 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~--g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (259)
++||+|||||++|+++|..|++. +.+|+|||+.+.++.....
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~------------------------------------ 46 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCG------------------------------------ 46 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC-----------------------------------------
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcC------------------------------------
Confidence 58999999999999999999998 7899999998755321110
Q ss_pred ecCCCCCccCCCCCCCCCCCCCHHHHHHHH-HHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEE
Q 024975 80 FQAYPFVARNYEGSVDLRRYPGHEEVLRYL-QNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAV 158 (259)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~V 158 (259)
.++... ......++..+. .++.++.+++ ++.+++|++++. ..+.+.+.++ ...+.+|+|
T Consensus 47 ---~p~~~~---------~~~~~~~~~~~~~~~~~~~~gi~--v~~~~~v~~i~~---~~~~v~~~~g---~~~~~~d~l 106 (449)
T 3kd9_A 47 ---IPYVVE---------GLSTPDKLMYYPPEVFIKKRGID--LHLNAEVIEVDT---GYVRVRENGG---EKSYEWDYL 106 (449)
T ss_dssp -------------------------------CTHHHHTTCE--EETTCEEEEECS---SEEEEECSSS---EEEEECSEE
T ss_pred ---CccccC---------CCCCHHHhhhcCHHHHHHhcCcE--EEecCEEEEEec---CCCEEEECCc---eEEEEcCEE
Confidence 000000 000002222222 3344577898 999999998864 3466655433 247899999
Q ss_pred EEccCCCCCCccCCCCCCCCCCCceEEcccCC-------CCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCCC
Q 024975 159 VVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYR-------IPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA 231 (259)
Q Consensus 159 IlAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~-------~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~~ 231 (259)
|+||| +.|+.|.++|.... + ........ ......+++++|||+|++|+|+|..|.+.+.+|++++|.+.
T Consensus 107 viAtG--~~p~~p~i~G~~~~-~-v~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 182 (449)
T 3kd9_A 107 VFANG--ASPQVPAIEGVNLK-G-VFTADLPPDALAIREYMEKYKVENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGER 182 (449)
T ss_dssp EECCC--EEECCCSCBTTTST-T-EECSCSTHHHHHHHHHHSSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred EECCC--CCCCCCCCCCCCCC-C-EEEeCCHHHHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCc
Confidence 99999 78888888887531 1 11110000 01122568999999999999999999999999999999872
Q ss_pred -------cc----cccCCCCCCCceEeeeeeEEeec
Q 024975 232 -------DE----THEKQPGYDNMWLHSMVRTKKCS 256 (259)
Q Consensus 232 -------~~----~~~~~~~~~~~~~~~~v~~~~~~ 256 (259)
++ +.+.+.+...+..++.|++++..
T Consensus 183 ~l~~~~~~~~~~~l~~~l~~~v~i~~~~~v~~i~~~ 218 (449)
T 3kd9_A 183 VLRRSFDKEVTDILEEKLKKHVNLRLQEITMKIEGE 218 (449)
T ss_dssp TTTTTSCHHHHHHHHHHHTTTSEEEESCCEEEEECS
T ss_pred cchhhcCHHHHHHHHHHHHhCcEEEeCCeEEEEecc
Confidence 11 22223333445556777777654
No 45
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=99.87 E-value=1.1e-23 Score=176.34 Aligned_cols=213 Identities=17% Similarity=0.161 Sum_probs=123.6
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceecC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQA 82 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (259)
+||+||||||+|+++|..|++.|.+|+|+|+++ +||+|... +|.|.+.++............+. +++..
T Consensus 9 ~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~-~GGtc~~~--------gciPsk~l~~~a~~~~~~~~~~~--~g~~~ 77 (492)
T 3ic9_A 9 VDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA-YGTTCARV--------GCMPSKLLIAAADASYHASQTDL--FGIQV 77 (492)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC-SSCHHHHH--------SHHHHHHHHHHHHHHHHHTCGGG--GTEEC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC-CCCccccc--------ChhcCHHHHHHHHHHHHHhhhhh--cCcCC
Confidence 799999999999999999999999999999965 89988653 33333222222111110001100 00000
Q ss_pred CCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHH-----------h-CCceeEEeceeEEEEEEeCCCcEEEEEEecCCce
Q 024975 83 YPFVARNYEGSVDLRRYPGHEEVLRYLQNFARE-----------F-GVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVV 150 (259)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----------~-~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~ 150 (259)
. .......++.+++.+...+ . +.+ +..+ ...- . +.++|.+.++
T Consensus 78 ~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~g-~a~~---~--~~~~v~~~~~---- 132 (492)
T 3ic9_A 78 D-------------RISVNGKAVMKRIQTERDRFVGFVVESVESFDEQD--KIRG-FAKF---L--DEHTLQVDDH---- 132 (492)
T ss_dssp S-------------EEEECHHHHHHHHHHHHHHHHHHHHHHHHHSCGGG--EEES-CEEE---E--ETTEEEETTT----
T ss_pred C-------------CCccCHHHHHHHHHHHHHHHHHHHHHHHHhhcCee--EEEE-EEEE---e--cCCEEEEcCC----
Confidence 0 0001113333333332221 1 222 2222 1111 1 2345666443
Q ss_pred EEEEeCEEEEccCCCCCCccCCCCCCCCCCCceEEcccCCCCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 151 EEETFDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 151 ~~~~ad~VIlAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
..+.||+||+||| +.|..|.+++.. .....++..+.. ....+++++|||+|++|+|+|..|.+.+.+|++++|.+
T Consensus 133 ~~~~~d~lViATG--s~p~~p~~~~~~--~~~v~t~~~~~~-~~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 207 (492)
T 3ic9_A 133 SQVIAKRIVIATG--SRPNYPEFLAAA--GSRLLTNDNLFE-LNDLPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSG 207 (492)
T ss_dssp EEEEEEEEEECCC--EECCCCHHHHTT--GGGEECHHHHTT-CSSCCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTT
T ss_pred cEEEeCEEEEccC--CCCcCCCCCCcc--CCcEEcHHHHhh-hhhcCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECC
Confidence 3799999999999 778877755432 122333333332 23346899999999999999999999999999999988
Q ss_pred C------ccccc----CCCCCCCceEeeeeeEEeec
Q 024975 231 A------DETHE----KQPGYDNMWLHSMVRTKKCS 256 (259)
Q Consensus 231 ~------~~~~~----~~~~~~~~~~~~~v~~~~~~ 256 (259)
. +++.+ .+.+...++.++.|++++..
T Consensus 208 ~~l~~~d~~~~~~l~~~l~~~V~i~~~~~v~~i~~~ 243 (492)
T 3ic9_A 208 SVANLQDEEMKRYAEKTFNEEFYFDAKARVISTIEK 243 (492)
T ss_dssp CCTTCCCHHHHHHHHHHHHTTSEEETTCEEEEEEEC
T ss_pred cccccCCHHHHHHHHHHHhhCcEEEECCEEEEEEEc
Confidence 2 22222 22222344445677777653
No 46
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.87 E-value=9.1e-23 Score=174.00 Aligned_cols=200 Identities=17% Similarity=0.200 Sum_probs=130.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHc--CCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccce
Q 024975 2 FRHVAVIGAGAAGLVVGHELLRE--GHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMG 79 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~--g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (259)
|+||+|||||++|+++|..|++. +.+|+|||+.+.++-... .....
T Consensus 1 M~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~----------------------~l~~~---------- 48 (565)
T 3ntd_A 1 MKKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANC----------------------GLPYH---------- 48 (565)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGG----------------------GHHHH----------
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcccccc----------------------CchHH----------
Confidence 57999999999999999999998 789999999876531000 00000
Q ss_pred ecCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEE
Q 024975 80 FQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVV 159 (259)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VI 159 (259)
+ .....+....+..++.++..+.+++ ++++++|++++... +.+.+.... ++....+.||+||
T Consensus 49 ~--------------~~~~~~~~~~~~~~~~~~~~~~~i~--~~~~~~V~~id~~~-~~v~~~~~~-~g~~~~~~~d~lv 110 (565)
T 3ntd_A 49 I--------------SGEIAQRSALVLQTPESFKARFNVE--VRVKHEVVAIDRAA-KLVTVRRLL-DGSEYQESYDTLL 110 (565)
T ss_dssp H--------------TSSSCCGGGGBCCCHHHHHHHHCCE--EETTEEEEEEETTT-TEEEEEETT-TCCEEEEECSEEE
T ss_pred h--------------cCCcCChHHhhccCHHHHHHhcCcE--EEECCEEEEEECCC-CEEEEEecC-CCCeEEEECCEEE
Confidence 0 0000001123334556666678998 89999999998654 444444311 1233578999999
Q ss_pred EccCCCCCCccCCCCCCCCCCCceEEcccCCC--C-----CCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCCC-
Q 024975 160 VCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRI--P-----NPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA- 231 (259)
Q Consensus 160 lAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~--~-----~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~~- 231 (259)
+||| +.|+.|.+||.+... ......... . ....+++++|||+|++|+|+|..|.+.+.+|++++|.+.
T Consensus 111 iAtG--~~p~~p~ipG~~~~~--v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 186 (565)
T 3ntd_A 111 LSPG--AAPIVPPIPGVDNPL--THSLRNIPDMDRILQTIQMNNVEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQV 186 (565)
T ss_dssp ECCC--EEECCCCCTTCCSTT--EECCSSHHHHHHHHHHHHHTTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred ECCC--CCCCCCCCCCCCCCC--EEEeCCHHHHHHHHHHHhhCCCCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCcc
Confidence 9999 688889998875421 111111000 0 112458999999999999999999999999999999982
Q ss_pred -----cccccC---CCCC--CCceEeeeeeEEee
Q 024975 232 -----DETHEK---QPGY--DNMWLHSMVRTKKC 255 (259)
Q Consensus 232 -----~~~~~~---~~~~--~~~~~~~~v~~~~~ 255 (259)
+++.+. .++. ..+..++.|++++.
T Consensus 187 l~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~ 220 (565)
T 3ntd_A 187 MTPVDREMAGFAHQAIRDQGVDLRLGTALSEVSY 220 (565)
T ss_dssp CTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEE
T ss_pred chhcCHHHHHHHHHHHHHCCCEEEeCCeEEEEec
Confidence 222111 1222 34444577877765
No 47
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.87 E-value=4.7e-23 Score=171.21 Aligned_cols=195 Identities=17% Similarity=0.162 Sum_probs=119.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCcccc-ccccceecccccccee
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSS-LYKSLRVNLPRELMGF 80 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 80 (259)
++||+||||||+|+++|..|++.|.+|+|+|+++.+||.|... ++.|.+.++... .+..+.. ......+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~--------g~~p~k~l~~~~~~~~~~~~--~~~g~~~ 70 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRV--------GCIPSKALLETTERIYEAKK--GLLGAKV 70 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHH--------SHHHHHHHHHHHHHHHHHHH--CCTTEEE
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCcccee--------cchhHHHHHHHHHHHHHHhh--hcCCccc
Confidence 4799999999999999999999999999999998899998653 222211111110 1111110 0000000
Q ss_pred cCCCCCccCCCCCCCCCCCCCHH----HHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeC
Q 024975 81 QAYPFVARNYEGSVDLRRYPGHE----EVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFD 156 (259)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad 156 (259)
...... +...+.... .+...+...+.+.+++ ++.++.+. .+.+.+.|.+ ++ ..+.||
T Consensus 71 ~~~~~~--------~~~~~~~~~~~~~~l~~~~~~~~~~~~v~--~~~g~~~~----i~~~~~~v~~-~g----~~~~~d 131 (455)
T 2yqu_A 71 KGVELD--------LPALMAHKDKVVQANTQGVEFLFKKNGIA--RHQGTARF----LSERKVLVEE-TG----EELEAR 131 (455)
T ss_dssp CCEEEC--------HHHHHHHHHHHHHHHHHHHHHHHHHHTCE--EEESCEEE----SSSSEEEETT-TC----CEEEEE
T ss_pred CCCccC--------HHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEeEEEE----ecCCeEEEee-CC----EEEEec
Confidence 000000 000000001 1223345556667888 77765432 2224455543 33 379999
Q ss_pred EEEEccCCCCCCccCCCCCCCCCCCceEEcccCCCCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 157 AVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 157 ~VIlAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
+||+||| +.|..|.+++... ....+...+.... ..+++++|||+|++|+|+|..|.+.+.+|+++++.+
T Consensus 132 ~lviAtG--~~p~~~~~~g~~~--~~v~~~~~~~~~~-~~~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~ 200 (455)
T 2yqu_A 132 YILIATG--SAPLIPPWAQVDY--ERVVTSTEALSFP-EVPKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMD 200 (455)
T ss_dssp EEEECCC--EEECCCTTBCCCS--SSEECHHHHTCCS-SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred EEEECCC--CCCCCCCCCCCCc--CcEechHHhhccc-cCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCC
Confidence 9999999 6788887777543 1233333333222 235899999999999999999999999999999987
No 48
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=99.87 E-value=5.4e-23 Score=166.83 Aligned_cols=166 Identities=12% Similarity=0.186 Sum_probs=116.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
+.+|+|||||++|+++|..|.+.+.+|+|||+.+.++ +. .. ..+..... .
T Consensus 9 ~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~----y~-----------------~~-~l~~~l~g----~---- 58 (385)
T 3klj_A 9 STKILILGAGPAGFSAAKAALGKCDDITMINSEKYLP----YY-----------------RP-RLNEIIAK----N---- 58 (385)
T ss_dssp BCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCC----BC-----------------GG-GHHHHHHS----C----
T ss_pred CCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCC----cc-----------------cC-hhhHHHcC----C----
Confidence 5789999999999999999977789999999987542 00 00 00000000 0
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEc
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlA 161 (259)
.+ ..++..+..+.+.+.+++ ++++++|++++... ..|.+.++. .+.||+||+|
T Consensus 59 -~~-----------------~~~l~~~~~~~~~~~~i~--~~~~~~V~~id~~~---~~v~~~~g~----~~~yd~lvlA 111 (385)
T 3klj_A 59 -KS-----------------IDDILIKKNDWYEKNNIK--VITSEFATSIDPNN---KLVTLKSGE----KIKYEKLIIA 111 (385)
T ss_dssp -CC-----------------GGGTBSSCHHHHHHTTCE--EECSCCEEEEETTT---TEEEETTSC----EEECSEEEEC
T ss_pred -CC-----------------HHHccCCCHHHHHHCCCE--EEeCCEEEEEECCC---CEEEECCCC----EEECCEEEEe
Confidence 00 011112223444567898 99999999998654 366776654 7999999999
Q ss_pred cCCCCCCccCCCCCCCCCCCceEEcccCCCCCC-----CCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 162 NGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNP-----FQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 162 tG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~-----~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
|| +.|+.|.+||.+ ...+......... ..+++++|||+|++|+|+|..|.+.+.+|++++|.+
T Consensus 112 tG--~~p~~p~i~G~~----~v~~~~~~~d~~~l~~~l~~~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~ 179 (385)
T 3klj_A 112 SG--SIANKIKVPHAD----EIFSLYSYDDALKIKDECKNKGKAFIIGGGILGIELAQAIIDSGTPASIGIILE 179 (385)
T ss_dssp CC--EEECCCCCTTCS----CEECCSSHHHHHHHHHHHHHHSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred cC--CCcCCCCCCCCC----CeEEeCCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCC
Confidence 99 788889898876 1222111111110 125889999999999999999999999999999988
No 49
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=99.87 E-value=5.9e-23 Score=171.05 Aligned_cols=197 Identities=17% Similarity=0.206 Sum_probs=120.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccc-cccccceecccccccee
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHS-SLYKSLRVNLPRELMGF 80 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 80 (259)
++||+|||||++|+++|..|++.|.+|+|+|+. .+||.|... ++.|.+.++.. ..+..+...... .++
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~~~~--------g~~psk~ll~~~~~~~~~~~~~~~--~g~ 71 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVCLNV--------GCIPSKALLRNAELVHIFTKDAKA--FGI 71 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHHHHH--------SHHHHHHHHHHHHHHHHHHHHTTT--TTE
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCccccc--------CchhhHHHHHHHHHHHHHHHHHHh--cCC
Confidence 379999999999999999999999999999997 688877532 11111111100 001111000000 000
Q ss_pred cCCCCCccCCCCCCCCCCCCCH----HHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeC
Q 024975 81 QAYPFVARNYEGSVDLRRYPGH----EEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFD 156 (259)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad 156 (259)
.+.... .+....... ..+...+.+.+.+.+++ ++.++.+. .+.+.+.+.+.++ ....+.+|
T Consensus 72 ~~~~~~-------~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~--~~~g~~~~----id~~~v~V~~~~G--~~~~~~~d 136 (464)
T 2a8x_A 72 SGEVTF-------DYGIAYDRSRKVAEGRVAGVHFLMKKNKIT--EIHGYGTF----ADANTLLVDLNDG--GTESVTFD 136 (464)
T ss_dssp EECCEE-------CHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EECEEEEE----SSSSEEEEEETTS--CCEEEEEE
T ss_pred CCCCcc-------CHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEeEEEE----ecCCeEEEEeCCC--ceEEEEcC
Confidence 000000 000000000 22334456666677888 77776543 2225566665443 22479999
Q ss_pred EEEEccCCCCCCccCCCCCCCCCCCceEEcccCCCCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 157 AVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 157 ~VIlAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
+||+||| +.|..|.++|... ...+........ ..+++++|||+|++|+|+|..|.+.+.+|++++|.+
T Consensus 137 ~lViAtG--~~~~~~~~~g~~~---~~~~~~~~~~~~-~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 204 (464)
T 2a8x_A 137 NAIIATG--SSTRLVPGTSLSA---NVVTYEEQILSR-ELPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLP 204 (464)
T ss_dssp EEEECCC--EEECCCTTCCCBT---TEECHHHHHTCS-SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred EEEECCC--CCCCCCCCCCCCc---eEEecHHHhhcc-ccCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCC
Confidence 9999999 6778887777553 233333322222 235899999999999999999999999999999987
No 50
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=99.87 E-value=2.2e-22 Score=168.94 Aligned_cols=223 Identities=15% Similarity=0.152 Sum_probs=132.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHc---CCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccc-cccceeccccc
Q 024975 1 MFRHVAVIGAGAAGLVVGHELLRE---GHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSL-YKSLRVNLPRE 76 (259)
Q Consensus 1 ~~~~v~IIG~G~~Gl~~a~~L~~~---g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 76 (259)
|++||+|||||++|+++|..|++. |.+|+|||+++ +||+|... ++.|.+.++.... +..+. ...
T Consensus 1 M~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~--------g~~psk~l~~~a~~~~~~~-~~~-- 68 (499)
T 1xdi_A 1 MVTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLD--------DCVPSKTFIASTGLRTELR-RAP-- 68 (499)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHT--------SHHHHHHHHHHHHHHHHHT-TTT--
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCc--------CccchHHHHHHHHHHHHHH-HHH--
Confidence 579999999999999999999999 99999999988 99988653 2222111111100 00000 000
Q ss_pred cceecCCCCCccCCCCCCCCCCCCCHH-----------HHHHHHHHHHHHhCCceeEEeceeEEEEEEe---CCCcEEEE
Q 024975 77 LMGFQAYPFVARNYEGSVDLRRYPGHE-----------EVLRYLQNFAREFGVDQVVRLHTEVLNARLV---ESNKWKVK 142 (259)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~---~~~~~~v~ 142 (259)
.+++..+. ........ .+...+.+.+.+.+++ ++.++ ++.+... +++.+.|.
T Consensus 69 ~~g~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~--~~~g~-~~~i~~~~~~~~~~~~V~ 134 (499)
T 1xdi_A 69 HLGFHIDF-----------DDAKISLPQIHARVKTLAAAQSADITAQLLSMGVQ--VIAGR-GELIDSTPGLARHRIKAT 134 (499)
T ss_dssp TTTBC-----------------CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EEESE-EEECCSSSCCSSEEEEEE
T ss_pred hCCCcccc-----------CCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEeE-EEEecCcccCCCCEEEEE
Confidence 00000000 00000112 2334456666677888 77774 5555431 00234444
Q ss_pred EEecCCceEEEEeCEEEEccCCCCCCccCCCCCCCCCCCceEEcccCCCCCCCCCCeEEEEccCcCHHHHHHHHhcccCe
Q 024975 143 SRKKDDVVEEETFDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKE 222 (259)
Q Consensus 143 ~~~g~~~~~~~~ad~VIlAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~ 222 (259)
..+ +....+.+|++|+||| +.|..|.++|.... ............ ..+++++|||+|++|+|+|..+.+.+.+
T Consensus 135 ~~~--g~~~~~~~d~lviATG--s~p~~p~i~g~~~~--~v~~~~~~~~~~-~~~~~vvViGgG~ig~E~A~~l~~~g~~ 207 (499)
T 1xdi_A 135 AAD--GSTSEHEADVVLVATG--ASPRILPSAQPDGE--RILTWRQLYDLD-ALPDHLIVVGSGVTGAEFVDAYTELGVP 207 (499)
T ss_dssp CTT--SCEEEEEESEEEECCC--EEECCCGGGCCCSS--SEEEGGGGGGCS-SCCSSEEEESCSHHHHHHHHHHHHTTCC
T ss_pred eCC--CcEEEEEeCEEEEcCC--CCCCCCCCCCCCcC--cEEehhHhhhhh-ccCCeEEEECCCHHHHHHHHHHHHcCCe
Confidence 332 2223689999999999 77888888776542 233333333222 2358899999999999999999999999
Q ss_pred EEEEecCCC------cccccCC---CCCCCceE--eeeeeEEeec
Q 024975 223 VHIASRSVA------DETHEKQ---PGYDNMWL--HSMVRTKKCS 256 (259)
Q Consensus 223 v~~~~r~~~------~~~~~~~---~~~~~~~~--~~~v~~~~~~ 256 (259)
|++++|.+. +++.+.+ ++..++.+ ++.|++++..
T Consensus 208 Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~ 252 (499)
T 1xdi_A 208 VTVVASQDHVLPYEDADAALVLEESFAERGVRLFKNARAASVTRT 252 (499)
T ss_dssp EEEECSSSSSSCCSSHHHHHHHHHHHHHTTCEEETTCCEEEEEEC
T ss_pred EEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEe
Confidence 999999872 2222221 22234444 4677777654
No 51
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.87 E-value=5.2e-23 Score=171.27 Aligned_cols=222 Identities=14% Similarity=0.152 Sum_probs=129.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
.+||+|||||++|+++|..|+++|.+|+|+|+ +.+||+|... ++.|.+.+.............+.......
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~--------gcip~k~l~~~~~~~~~~~~~~~~g~~~~ 75 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTCVIR--------GCVPKKLYVYASQFAEHFEDAAGFGWTVG 75 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHHHHH--------SHHHHHHHHHHHHHHHHHHHGGGGTEEEC
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCccccc--------CchhhHHHHHHHHHHHHHHHHHhcCcccC
Confidence 47999999999999999999999999999999 6799988653 22222111111100000000000000000
Q ss_pred C--CCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEE
Q 024975 82 A--YPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVV 159 (259)
Q Consensus 82 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VI 159 (259)
. ..+... ..........+..++...+.+.+++ +..+ ++..+ + ...+.+..+. ..+.+|++|
T Consensus 76 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~gv~--~~~g-~~~~i---~--~~~v~~~~~~---~~~~~d~lv 138 (463)
T 4dna_A 76 ESRFDWAKL------VAAKEQEIARLEGLYRKGLANAGAE--ILDT-RAELA---G--PNTVKLLASG---KTVTAERIV 138 (463)
T ss_dssp CCEECHHHH------HHHHHHHHHHHHHHHHHHHHHHTCE--EEES-CEEES---S--SSEEEETTTT---EEEEEEEEE
T ss_pred CCCcCHHHH------HHHHHHHHHHHHHHHHHHHHhCCCE--EEEE-EEEEe---e--CCEEEEecCC---eEEEeCEEE
Confidence 0 000000 0000000023334455556666887 6655 44433 2 2345552111 479999999
Q ss_pred EccCCCCCCc-cCCCCCCCCCCCceEEcccCCCCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCCC------c
Q 024975 160 VCNGHFSVPR-LAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA------D 232 (259)
Q Consensus 160 lAtG~~s~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~~------~ 232 (259)
+||| +.|. .|.++|... ...+..+... ...+++++|+|+|++|+|+|..+.+.+.+|++++|.+. +
T Consensus 139 iAtG--~~p~~~p~i~G~~~----~~~~~~~~~~-~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~~~~~ 211 (463)
T 4dna_A 139 IAVG--GHPSPHDALPGHEL----CITSNEAFDL-PALPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILSRFDQ 211 (463)
T ss_dssp ECCC--EEECCCTTSTTGGG----CBCHHHHTTC-SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCH
T ss_pred EecC--CCcccCCCCCCccc----cccHHHHhhh-hcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccccCH
Confidence 9999 7788 888888653 1222222222 22468999999999999999999999999999999872 2
Q ss_pred ccccCC---CCCCCceE--eeeeeEEeec
Q 024975 233 ETHEKQ---PGYDNMWL--HSMVRTKKCS 256 (259)
Q Consensus 233 ~~~~~~---~~~~~~~~--~~~v~~~~~~ 256 (259)
++.+.+ ++..++.+ ++.|++++..
T Consensus 212 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~ 240 (463)
T 4dna_A 212 DMRRGLHAAMEEKGIRILCEDIIQSVSAD 240 (463)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEEC
T ss_pred HHHHHHHHHHHHCCCEEECCCEEEEEEEc
Confidence 222221 22234444 4677777654
No 52
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=99.87 E-value=1.6e-22 Score=169.46 Aligned_cols=174 Identities=16% Similarity=0.203 Sum_probs=115.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHcC---CcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccc
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREG---HTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELM 78 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g---~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (259)
.+||+|||||++|+++|..|++.| .+|+|||+++.++....- +. .+ +.
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~-----------------~~--~~--~~-------- 85 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAG-----------------MA--LW--IG-------- 85 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGG-----------------HH--HH--HT--------
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccc-----------------cc--hh--hc--------
Confidence 389999999999999999999987 999999998754311000 00 00 00
Q ss_pred eecCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEE
Q 024975 79 GFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAV 158 (259)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~V 158 (259)
...... .++...+.+.+.+.+++ ++.+++|+.++..+ +.+.+.. ++ ....+.||+|
T Consensus 86 ----~~~~~~--------------~~~~~~~~~~~~~~gv~--v~~~~~v~~i~~~~-~~v~v~~-~g--~~~~~~~d~l 141 (490)
T 2bc0_A 86 ----EQIAGP--------------EGLFYSDKEELESLGAK--VYMESPVQSIDYDA-KTVTALV-DG--KNHVETYDKL 141 (490)
T ss_dssp ----TSSSCS--------------GGGBSCCHHHHHHTTCE--EETTCCEEEEETTT-TEEEEEE-TT--EEEEEECSEE
T ss_pred ----CccCCH--------------HHhhhcCHHHHHhCCCE--EEeCCEEEEEECCC-CEEEEEe-CC--cEEEEECCEE
Confidence 000000 00000112334467888 88899999998654 5455432 21 1247999999
Q ss_pred EEccCCCCCCccCCCCCCC------CCCC---ceEEcccCCC-------CCCCCCCeEEEEccCcCHHHHHHHHhcccCe
Q 024975 159 VVCNGHFSVPRLAQVPGID------SWPG---KQMHSHNYRI-------PNPFQDQVVILIGHYASGLDIKRDLAGFAKE 222 (259)
Q Consensus 159 IlAtG~~s~~~~~~~~g~~------~~~~---~~~~~~~~~~-------~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~ 222 (259)
|+||| +.|..|.++|.. .|.+ ...+...+.. .....+++++|||+|++|+|+|..|.+.+.+
T Consensus 142 viAtG--~~p~~p~i~G~~~~~~~~~f~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~ig~E~A~~l~~~g~~ 219 (490)
T 2bc0_A 142 IFATG--SQPILPPIKGAEIKEGSLEFEATLENLQFVKLYQNSADVIAKLENKDIKRVAVVGAGYIGVELAEAFQRKGKE 219 (490)
T ss_dssp EECCC--EEECCCSCBTCCBCTTCTTCCBSSTTEEECSSHHHHHHHHHHTTSTTCCEEEEECCSHHHHHHHHHHHHTTCE
T ss_pred EECCC--CCcCCCCCCCccccccccccccccCCEEEeCCHHHHHHHHHHhhhcCCceEEEECCCHHHHHHHHHHHHCCCe
Confidence 99999 788888888876 2321 2232211111 0113568999999999999999999999999
Q ss_pred EEEEecCC
Q 024975 223 VHIASRSV 230 (259)
Q Consensus 223 v~~~~r~~ 230 (259)
|++++|.+
T Consensus 220 Vtlv~~~~ 227 (490)
T 2bc0_A 220 VVLIDVVD 227 (490)
T ss_dssp EEEEESSS
T ss_pred EEEEEccc
Confidence 99999987
No 53
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.86 E-value=1.1e-22 Score=169.31 Aligned_cols=190 Identities=21% Similarity=0.232 Sum_probs=115.4
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCcccc-ccccceeccccccceec
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSS-LYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 81 (259)
+||+|||||++|+++|..|++.|.+|+|+|+.+ +||.|... ++.|.+.++... .+..+.. .. .+++.
T Consensus 7 ~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~~~--------g~iP~k~l~~~~~~~~~~~~-~~--~~g~~ 74 (464)
T 2eq6_A 7 YDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCLNV--------GCIPTKALLHAAETLHHLKV-AE--GFGLK 74 (464)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHT--------SHHHHHHHHHHHHHHHHHHH-HG--GGTEE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCCCc--------ChHHHHHHHHHHHHHHHHHh-HH--hcCCC
Confidence 799999999999999999999999999999987 89988653 222221111111 1111100 00 00110
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHH----HHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCE
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRY----LQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDA 157 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~ 157 (259)
..+.. .+...+....++..+ +...+.+.+++ ++.++.+. + +. + .+.+. + ..+.||+
T Consensus 75 ~~~~~-------~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~--~~~g~~~~-~--~~-~--~v~v~-g----~~~~~d~ 134 (464)
T 2eq6_A 75 AKPEL-------DLKKLGGWRDQVVKKLTGGVGTLLKGNGVE--LLRGFARL-V--GP-K--EVEVG-G----ERYGAKS 134 (464)
T ss_dssp CCCEE-------CHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EEESCEEE-E--ET-T--EEEET-T----EEEEEEE
T ss_pred CCCCc-------CHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEeeeEEE-c--cC-C--EEEEc-c----EEEEeCE
Confidence 00000 000000001122222 34455567888 77765433 3 22 3 34443 2 3799999
Q ss_pred EEEccCCCCCCccCC-CCCCCCCCCceEEcccCCCCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 158 VVVCNGHFSVPRLAQ-VPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 158 VIlAtG~~s~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
||+||| +.|..|+ +++. ....++..+.......+++++|||+|++|+|+|..|.+.+.+|++++|.+
T Consensus 135 lViATG--s~p~~p~gi~~~----~~v~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 202 (464)
T 2eq6_A 135 LILATG--SEPLELKGFPFG----EDVWDSTRALKVEEGLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMP 202 (464)
T ss_dssp EEECCC--EEECCBTTBCCS----SSEECHHHHTCGGGCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred EEEcCC--CCCCCCCCCCCC----CcEEcHHHHHhhhhhcCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCC
Confidence 999999 6777775 5541 12344444333322245899999999999999999999999999999987
No 54
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.86 E-value=1.7e-22 Score=168.81 Aligned_cols=227 Identities=16% Similarity=0.132 Sum_probs=127.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCC------cCceeeeCCCCCCCCCCCCCCCCCcccc-ccccceecc
Q 024975 1 MFRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQ------VGGSWIYTSETESDPLGVDPNRYPVHSS-LYKSLRVNL 73 (259)
Q Consensus 1 ~~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~------~gg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 73 (259)
+.|||+|||||++|+++|..|++.|.+|+|+|+++. +||+|... ++.|.+.+.... .+..+....
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~~~GG~~~~~--------gciPsk~l~~~~~~~~~~~~~~ 73 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNV--------GCIPSKALLDSSYKFHEAHESF 73 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSBCCSHHHHHH--------SHHHHHHHHHHHHHHHHHHTTS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCCCcCCccccc--------cHHHHHHHHHHHHHHHHHHHHH
Confidence 468999999999999999999999999999999863 55555432 222211111100 011000000
Q ss_pred ccccceecCCCCCccCCCCCCCCCCCCCH----HHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCc
Q 024975 74 PRELMGFQAYPFVARNYEGSVDLRRYPGH----EEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDV 149 (259)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~ 149 (259)
............ .+....... ..+...+.....+.+++ +..+..+ . .+.+.+.+...+ +.
T Consensus 74 ~~~g~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~g~~~-~---~~~~~~~v~~~~--g~ 137 (476)
T 3lad_A 74 KLHGISTGEVAI--------DVPTMIARKDQIVRNLTGGVASLIKANGVT--LFEGHGK-L---LAGKKVEVTAAD--GS 137 (476)
T ss_dssp GGGTEECSCCEE--------CHHHHHHHHHHHHHHHHHHHHHHHHHHTCE--EEESEEE-E---CSTTCEEEECTT--SC
T ss_pred HhcCcccCCCcc--------CHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEeEEE-E---ecCCEEEEEcCC--Cc
Confidence 000000000000 000000000 12223334455566887 6665432 2 222556665543 33
Q ss_pred eEEEEeCEEEEccCCCCCCccCCCCCCCCCCCceEEcccCCCCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecC
Q 024975 150 VEEETFDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRS 229 (259)
Q Consensus 150 ~~~~~ad~VIlAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~ 229 (259)
...+.+|+||+||| +.|..|+.++... ....++...... ...+++++|||+|++|+|+|..|.+.+.+|++++|.
T Consensus 138 ~~~~~~d~lvlAtG--~~p~~~~~~~~~~--~~v~~~~~~~~~-~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~ 212 (476)
T 3lad_A 138 SQVLDTENVILASG--SKPVEIPPAPVDQ--DVIVDSTGALDF-QNVPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAM 212 (476)
T ss_dssp EEEECCSCEEECCC--EEECCCTTSCCCS--SSEEEHHHHTSC-SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred eEEEEcCEEEEcCC--CCCCCCCCCCCCc--ccEEechhhhcc-ccCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecC
Confidence 35799999999999 6666554443221 223444333332 234689999999999999999999999999999998
Q ss_pred C------CcccccCC---CCCCCce--EeeeeeEEeec
Q 024975 230 V------ADETHEKQ---PGYDNMW--LHSMVRTKKCS 256 (259)
Q Consensus 230 ~------~~~~~~~~---~~~~~~~--~~~~v~~~~~~ 256 (259)
+ ++++.+.+ ++..++. .++.|++++..
T Consensus 213 ~~~l~~~~~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~ 250 (476)
T 3lad_A 213 DKFLPAVDEQVAKEAQKILTKQGLKILLGARVTGTEVK 250 (476)
T ss_dssp SSSSTTSCHHHHHHHHHHHHHTTEEEEETCEEEEEEEC
T ss_pred CCcCcccCHHHHHHHHHHHHhCCCEEEECCEEEEEEEc
Confidence 7 22222221 2223444 45677777643
No 55
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=99.86 E-value=5.6e-23 Score=172.17 Aligned_cols=218 Identities=18% Similarity=0.235 Sum_probs=129.1
Q ss_pred CCeEEEECCChHHHHHHHHHHH-cCCcEEEEe--------eCCCcCceeeeCCCCCCCCCCCCCCCCCcccccc-cccee
Q 024975 2 FRHVAVIGAGAAGLVVGHELLR-EGHTVVVYE--------KGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLY-KSLRV 71 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~-~g~~v~v~e--------~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 71 (259)
.+||+|||||++|+++|.+|++ .|.+|+||| +...+||+|... +|.|.+.+...... ..+.
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~~--------gciP~k~l~~~a~~~~~~~- 77 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNV--------GCVPKKLMVTGAQYMDHLR- 77 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHHH--------SHHHHHHHHHHHHHHHHHH-
T ss_pred ccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeecC--------CcchHHHHHHHHHHHHHHh-
Confidence 3799999999999999999999 999999999 346789988653 22222111111110 0000
Q ss_pred ccccccceecCCCCCccCCCCCCCCCCCCCHHHHHH-----------HHHHHHHHh-CCceeEEeceeEEEEEEeCCCcE
Q 024975 72 NLPRELMGFQAYPFVARNYEGSVDLRRYPGHEEVLR-----------YLQNFAREF-GVDQVVRLHTEVLNARLVESNKW 139 (259)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~l~~~~~~~-~~~~~v~~~~~v~~i~~~~~~~~ 139 (259)
.. ..+.+... .. ........+.. .+...+.+. +++ ++.++ ++.+. . +
T Consensus 78 ~~-------~~~g~~~~-----~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~--~~~g~-~~~i~--~---~ 136 (495)
T 2wpf_A 78 ES-------AGFGWEFD-----GS-SVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLD--FFLGW-GSLES--K---N 136 (495)
T ss_dssp HH-------HTTTEECC-----GG-GCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEE--EEESE-EEEEE--T---T
T ss_pred HH-------HhcCcccC-----Cc-ccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeE--EEEeE-EEEee--C---C
Confidence 00 00110000 00 00001122222 223334455 777 66653 55442 2 4
Q ss_pred EEEEEecCC----ceEEEEeCEEEEccCCCCCCccCCCCCCCCCCCceEEcccCCCCCCCCCCeEEEEccCcCHHHHHHH
Q 024975 140 KVKSRKKDD----VVEEETFDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRD 215 (259)
Q Consensus 140 ~v~~~~g~~----~~~~~~ad~VIlAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~a~e~a~~ 215 (259)
.|.+.+..+ ....+.||+||+||| +.|..|.++|.+. ..++..+.... ..+++++|||+|++|+|+|..
T Consensus 137 ~v~v~~~~~~~~~~~~~~~~d~lViATG--s~p~~p~i~G~~~----~~~~~~~~~~~-~~~~~vvViGgG~ig~E~A~~ 209 (495)
T 2wpf_A 137 VVVVRETADPKSAVKERLQADHILLATG--SWPQMPAIPGIEH----CISSNEAFYLP-EPPRRVLTVGGGFISVEFAGI 209 (495)
T ss_dssp EEEEESSSSTTSCEEEEEEEEEEEECCC--EEECCCCCTTGGG----CEEHHHHTTCS-SCCSEEEEECSSHHHHHHHHH
T ss_pred EEEEeecCCccCCCCeEEEcCEEEEeCC--CCcCCCCCCCccc----cccHHHHHhhh-hcCCeEEEECCCHHHHHHHHH
Confidence 555552111 024799999999999 7888888888742 23333333322 235899999999999999999
Q ss_pred Hhcc---cCeEEEEecCCC------cccccCC---CC--CCCceEeeeeeEEeec
Q 024975 216 LAGF---AKEVHIASRSVA------DETHEKQ---PG--YDNMWLHSMVRTKKCS 256 (259)
Q Consensus 216 l~~~---~~~v~~~~r~~~------~~~~~~~---~~--~~~~~~~~~v~~~~~~ 256 (259)
|.+. +.+|++++|.+. +++.+.+ ++ ...+..++.|++++..
T Consensus 210 l~~~~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~ 264 (495)
T 2wpf_A 210 FNAYKPPGGKVTLCYRNNLILRGFDETIREEVTKQLTANGIEIMTNENPAKVSLN 264 (495)
T ss_dssp HHHHCCTTCEEEEEESSSSSCTTSCHHHHHHHHHHHHHTTCEEEESCCEEEEEEC
T ss_pred HHhhCCCCCeEEEEEcCCccccccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEc
Confidence 9999 999999999872 2222221 11 2344456778887654
No 56
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.86 E-value=2.9e-22 Score=171.48 Aligned_cols=202 Identities=18% Similarity=0.277 Sum_probs=133.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHc--CCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccc
Q 024975 1 MFRHVAVIGAGAAGLVVGHELLRE--GHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELM 78 (259)
Q Consensus 1 ~~~~v~IIG~G~~Gl~~a~~L~~~--g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (259)
+++||+|||||++|+++|..|++. +.+|+|||+.+.++ +.. +
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~--~~~----------------------------------~ 78 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYIS--FAN----------------------------------C 78 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSS--BCG----------------------------------G
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCcc--ccC----------------------------------C
Confidence 358999999999999999999998 88999999987653 000 0
Q ss_pred eecCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEE
Q 024975 79 GFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAV 158 (259)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~V 158 (259)
. +++.. .....+....+..++.++..+.+++ ++++++|++++... +.+.+... .++....+.+|+|
T Consensus 79 ~---lp~~~-------~g~~~~~~~~~~~~~~~~~~~~gi~--v~~~~~V~~id~~~-~~v~v~~~-~~g~~~~~~~d~l 144 (588)
T 3ics_A 79 G---LPYYI-------GGVITERQKLLVQTVERMSKRFNLD--IRVLSEVVKINKEE-KTITIKNV-TTNETYNEAYDVL 144 (588)
T ss_dssp G---HHHHH-------TTSSCCGGGGBSSCHHHHHHHTTCE--EECSEEEEEEETTT-TEEEEEET-TTCCEEEEECSEE
T ss_pred C---Cchhh-------cCcCCChHHhhccCHHHHHHhcCcE--EEECCEEEEEECCC-CEEEEeec-CCCCEEEEeCCEE
Confidence 0 00000 0000011123445667777788998 89999999998654 44444431 1233357899999
Q ss_pred EEccCCCCCCccCCCCCCCCCCCceEEcccCCCCC-------CCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCCC
Q 024975 159 VVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPN-------PFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA 231 (259)
Q Consensus 159 IlAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~-------~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~~ 231 (259)
|+||| +.|..|.++|.....+ ........... ...+++++|||+|++|+|+|..|.+.+.+|++++|.+.
T Consensus 145 viAtG--~~p~~p~i~G~~~~~~-v~~~~~~~~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 221 (588)
T 3ics_A 145 ILSPG--AKPIVPSIPGIEEAKA-LFTLRNVPDTDRIKAYIDEKKPRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQ 221 (588)
T ss_dssp EECCC--EEECCCCCTTTTTCTT-EEECSSHHHHHHHHHHHHHHCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred EECCC--CCCCCCCCCCcccCCC-eEEeCCHHHHHHHHHHHhhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCc
Confidence 99999 7888899998743332 22211111100 12468999999999999999999999999999999872
Q ss_pred ------cccccCC---CCCCCceE--eeeeeEEee
Q 024975 232 ------DETHEKQ---PGYDNMWL--HSMVRTKKC 255 (259)
Q Consensus 232 ------~~~~~~~---~~~~~~~~--~~~v~~~~~ 255 (259)
+++.+.+ ++..++.+ ++.|++++.
T Consensus 222 ~l~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~ 256 (588)
T 3ics_A 222 VMPPIDYEMAAYVHEHMKNHDVELVFEDGVDALEE 256 (588)
T ss_dssp SCTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEG
T ss_pred ccccCCHHHHHHHHHHHHHcCCEEEECCeEEEEec
Confidence 2222111 22234444 467777765
No 57
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.86 E-value=1.6e-21 Score=164.42 Aligned_cols=216 Identities=14% Similarity=0.139 Sum_probs=135.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCcccc-ccccceecccccccee
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSS-LYKSLRVNLPRELMGF 80 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 80 (259)
++||+|||||++|+++|.+|++.|.+|+|||+++.+||.|.+. ++.|.+.++... .+..+. ..
T Consensus 43 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~--------g~~p~k~l~~~~~~~~~~~-~~------- 106 (523)
T 1mo9_A 43 EYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPHN--------ACVPHHLFSDCAAELMLAR-TF------- 106 (523)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHHH--------SHHHHHHHHHHHHHHHHHH-HT-------
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCccccc--------CcCchHHHHHHHHHHHHHh-hh-------
Confidence 4799999999999999999999999999999998889988643 111111000000 000000 00
Q ss_pred cCCCCCccCCCCCCCCCCCCCHHHHHHHHH-------HHH-----HHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCC
Q 024975 81 QAYPFVARNYEGSVDLRRYPGHEEVLRYLQ-------NFA-----REFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDD 148 (259)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-------~~~-----~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~ 148 (259)
..+.+. ......++...++..++. ..+ .+.+++ +++..+++.+.. ..+.+. +
T Consensus 107 ~~~g~~------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~--~~~~~~v~~i~~-----~~v~~~-g-- 170 (523)
T 1mo9_A 107 SGQYWF------PDMTEKVVGIKEVVDLFRAGRNGPHGIMNFQSKEQLNLE--YILNCPAKVIDN-----HTVEAA-G-- 170 (523)
T ss_dssp TTSTTC------CCCTTCCCCHHHHHHHHHHHTHHHHHHHHHHHHHTSCCC--EEESSCCEEEET-----TEEEET-T--
T ss_pred hhcCcH------HHHHhhhhhHHHHHHHHHhhhhhhhhhhhhcccccCCcE--EEEeeEEEEeeC-----CEEEEC-C--
Confidence 001100 001112333566666554 333 556787 775667777642 244443 2
Q ss_pred ceEEEEeCEEEEccCCCCCCccCCCCCCCCCCCceEEcccCC-CCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEe
Q 024975 149 VVEEETFDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYR-IPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIAS 227 (259)
Q Consensus 149 ~~~~~~ad~VIlAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~ 227 (259)
..+.+|+||+||| +.|..|.++|... . ...+...+. .....++++++|||+|++|+|+|..+.+.+.+|++++
T Consensus 171 --~~~~~d~lViATG--s~p~~p~i~G~~~-~-~v~~~~~~~~~l~~~~g~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~ 244 (523)
T 1mo9_A 171 --KVFKAKNLILAVG--AGPGTLDVPGVNA-K-GVFDHATLVEELDYEPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLV 244 (523)
T ss_dssp --EEEEBSCEEECCC--EECCCCCSTTTTS-B-TEEEHHHHHHHCCSCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred --EEEEeCEEEECCC--CCCCCCCCCCccc-C-cEeeHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEE
Confidence 3799999999999 7888888888754 1 133433333 2223345899999999999999999999999999999
Q ss_pred cCCC------cccccCC---CCCCCceE--eeeeeEEee
Q 024975 228 RSVA------DETHEKQ---PGYDNMWL--HSMVRTKKC 255 (259)
Q Consensus 228 r~~~------~~~~~~~---~~~~~~~~--~~~v~~~~~ 255 (259)
|.+. +++.+.+ ++..++.+ ++.|++++.
T Consensus 245 ~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~ 283 (523)
T 1mo9_A 245 RTEPLKLIKDNETRAYVLDRMKEQGMEIISGSNVTRIEE 283 (523)
T ss_dssp SSCTTTTCCSHHHHHHHHHHHHHTTCEEESSCEEEEEEE
T ss_pred ecCcccccccHHHHHHHHHHHHhCCcEEEECCEEEEEEE
Confidence 9872 2222211 12234444 567777765
No 58
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.86 E-value=2.3e-22 Score=167.66 Aligned_cols=196 Identities=19% Similarity=0.306 Sum_probs=117.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
++||+|||||++|+++|.+|++.|.+|+|||++ .+||+|... ++.|.+.++............+.. .
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~~~--------g~ip~k~l~~~~~~~~~~~~~~~~----~ 70 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGGTCVNV--------GCVPSKIMIRAAHIAHLRRESPFD----G 70 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTHHHHHH--------SHHHHHHHHHHHHHHHHHHCCTTT----T
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCccccCC--------CccchHHHHHHHHHHHHHhhhhhc----C
Confidence 489999999999999999999999999999997 689988653 222211111110000000000000 0
Q ss_pred CCCCCccCCCCCCCCCCCC----CHHHHHHHHH-----HHHHHh-CCceeEEeceeEEEEEEeCCCcEEEEEEecCCceE
Q 024975 82 AYPFVARNYEGSVDLRRYP----GHEEVLRYLQ-----NFAREF-GVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVE 151 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~-----~~~~~~-~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~ 151 (259)
..+.. .....+. ....+..++. +.+.+. +++ ++.+ ++..+. . ..+.|.+.++ ...
T Consensus 71 g~~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~--~~~g-~~~~~~--~-~~~~v~~~~g--~~~ 135 (467)
T 1zk7_A 71 GIAAT-------VPTIDRSKLLAQQQARVDELRHAKYEGILGGNPAIT--VVHG-EARFKD--D-QSLTVRLNEG--GER 135 (467)
T ss_dssp TSCCC-------CCCCCHHHHHHHHHHHHHHHHHHHTHHHHTTCTTEE--EEEE-EEEEEE--T-TEEEEEETTS--SEE
T ss_pred CccCC-------CCccCHHHHHHHHHHHHHHHhhhhHHHHHhccCCeE--EEEE-EEEEcc--C-CEEEEEeCCC--ceE
Confidence 00000 0000000 0011222222 223333 666 5554 455443 2 4566665443 224
Q ss_pred EEEeCEEEEccCCCCCCccCCCCCCCCCCCceEEcccCCCCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 152 EETFDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 152 ~~~ad~VIlAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
.+.||+||+||| +.|..|.++|.+... .......... ...+++++|||+|++|+|+|..|.+.+.+|++++|.+
T Consensus 136 ~~~~d~lviAtG--s~p~~p~i~G~~~~~--~~~~~~~~~~-~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 209 (467)
T 1zk7_A 136 VVMFDRCLVATG--ASPAVPPIPGLKESP--YWTSTEALAS-DTIPERLAVIGSSVVALELAQAFARLGSKVTVLARNT 209 (467)
T ss_dssp EEECSEEEECCC--EEECCCCCTTTTTSC--CBCHHHHHHC-SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred EEEeCEEEEeCC--CCCCCCCCCCCCcCc--eecHHHHhcc-cccCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECC
Confidence 799999999999 788899998875421 1222222211 1236899999999999999999999999999999987
No 59
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=99.86 E-value=8e-23 Score=169.98 Aligned_cols=184 Identities=18% Similarity=0.307 Sum_probs=115.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccc-cccceecccccccee
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSL-YKSLRVNLPRELMGF 80 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 80 (259)
++||+|||||++|+++|.+|++.|.+|+|||++ .+||+|... +|.|.+.+..... +..+. ....
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~--------gciP~k~l~~~a~~~~~~~-~~~~----- 68 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK-ALGGTCVNV--------GCVPKKVMWYASHLAEAVR-DAPG----- 68 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHH--------SHHHHHHHHHHHHHHHHHH-HGGG-----
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC-CCCCcCcCc--------CchhHHHHHHHHHHHHHHh-hhhh-----
Confidence 489999999999999999999999999999997 689988643 2222111111110 00110 0000
Q ss_pred cCCCCCccCCCCCCCCCCCCCHHH-----------HHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCc
Q 024975 81 QAYPFVARNYEGSVDLRRYPGHEE-----------VLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDV 149 (259)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~ 149 (259)
+.+... ........ +...+...+.+.+++ ++.+ ++..+. . +.|.+ ++
T Consensus 69 --~g~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~--~~~g-~~~~i~--~---~~v~~-~g--- 126 (463)
T 2r9z_A 69 --FGVQAS--------GGTLDWPRLVAGRDRYIGAINSFWDGYVERLGIT--RVDG-HARFVD--A---HTIEV-EG--- 126 (463)
T ss_dssp --GTBCCC-----------CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EEES-CEEEEE--T---TEEEE-TT---
T ss_pred --cCcccC--------CCCcCHHHHHHHHHHHHHHHHHHHHHHHHHCCCE--EEEe-EEEEcc--C---CEEEE-CC---
Confidence 010000 00011122 222334444566887 6665 344432 2 34555 32
Q ss_pred eEEEEeCEEEEccCCCCCCccCCCCCCCCCCCceEEcccCCCCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecC
Q 024975 150 VEEETFDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRS 229 (259)
Q Consensus 150 ~~~~~ad~VIlAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~ 229 (259)
..+.+|+||+||| +.|..|.+||.+. ..++..+.... ..+++++|||+|++|+|+|..|.+.+.+|++++|.
T Consensus 127 -~~~~~d~lviAtG--s~p~~p~i~G~~~----~~~~~~~~~~~-~~~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~ 198 (463)
T 2r9z_A 127 -QRLSADHIVIATG--GRPIVPRLPGAEL----GITSDGFFALQ-QQPKRVAIIGAGYIGIELAGLLRSFGSEVTVVALE 198 (463)
T ss_dssp -EEEEEEEEEECCC--EEECCCSCTTGGG----SBCHHHHHHCS-SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred -EEEEcCEEEECCC--CCCCCCCCCCccc----eecHHHHhhhh-ccCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcC
Confidence 3789999999999 7888888888632 12222222111 23589999999999999999999999999999998
Q ss_pred C
Q 024975 230 V 230 (259)
Q Consensus 230 ~ 230 (259)
+
T Consensus 199 ~ 199 (463)
T 2r9z_A 199 D 199 (463)
T ss_dssp S
T ss_pred C
Confidence 7
No 60
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=99.85 E-value=4.9e-22 Score=165.85 Aligned_cols=181 Identities=17% Similarity=0.162 Sum_probs=106.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHc--CCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccce
Q 024975 2 FRHVAVIGAGAAGLVVGHELLRE--GHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMG 79 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~--g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (259)
++||+|||||++|+++|..|+++ +.+|+|||+++.++-... +. . .+..
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~~----------gl-------~-----~~~~-------- 52 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGGC----------GI-------P-----YYVS-------- 52 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC---------------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCccccccc----------cc-------c-----hhhc--------
Confidence 47999999999999999999998 899999999876531000 00 0 0000
Q ss_pred ecCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEE
Q 024975 80 FQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVV 159 (259)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VI 159 (259)
. .+. .....++....+..+..++..+.+++ ++++++|++++... +.+.+... .++....+.+|+||
T Consensus 53 --g-~~~-------~~~~~~~~~~~~~~~~~~~~~~~gi~--~~~~~~V~~id~~~-~~v~~~~~-~~g~~~~~~~d~lv 118 (472)
T 3iwa_A 53 --G-EVS-------NIESLQATPYNVVRDPEFFRINKDVE--ALVETRAHAIDRAA-HTVEIENL-RTGERRTLKYDKLV 118 (472)
T ss_dssp --------------------------------------CE--EECSEEEEEEETTT-TEEEEEET-TTCCEEEEECSEEE
T ss_pred --C-CCC-------chHHhccccchhccCHHHHhhhcCcE--EEECCEEEEEECCC-CEEEEeec-CCCCEEEEECCEEE
Confidence 0 000 00001111122445566666667888 88999999998654 44444431 11233478999999
Q ss_pred EccCCCCCCccCCCCCCCCCCCceEEcccCCC-------CCCCCCCeEEEEccCcCHHHHHHHHhcc-cCeEEEEecCC
Q 024975 160 VCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRI-------PNPFQDQVVILIGHYASGLDIKRDLAGF-AKEVHIASRSV 230 (259)
Q Consensus 160 lAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~-------~~~~~~~~v~viG~G~~a~e~a~~l~~~-~~~v~~~~r~~ 230 (259)
+||| +.|..|.++|... .+ ......... .....+++++|+|+|++|+|+|..+.+. +.+|++++|.+
T Consensus 119 iAtG--~~p~~p~i~G~~~-~~-v~~~~~~~~~~~l~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~ 193 (472)
T 3iwa_A 119 LALG--SKANRPPVEGMDL-AG-VTPVTNLDEAEFVQHAISAGEVSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELAD 193 (472)
T ss_dssp ECCC--EEECCCSCTTTTS-BT-EEECCSHHHHHHHHHHCCTTSCSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSS
T ss_pred EeCC--CCcCCCCCCCCCC-CC-EEEeCCHHHHHHHHHHhhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccC
Confidence 9999 7888888888752 22 121111100 0112368999999999999999999999 99999999987
No 61
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=99.85 E-value=1.6e-22 Score=168.93 Aligned_cols=197 Identities=18% Similarity=0.248 Sum_probs=117.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccc-cccceecccccccee
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSL-YKSLRVNLPRELMGF 80 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 80 (259)
.+||+|||||++|+++|..|++.|.+|+|||++ .+||+|... +|.|.+.+..... +..+. ... .+++
T Consensus 11 ~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~n~--------gciP~k~l~~~~~~~~~~~-~~~--~~g~ 78 (479)
T 2hqm_A 11 HYDYLVIGGGSGGVASARRAASYGAKTLLVEAK-ALGGTCVNV--------GCVPKKVMWYASDLATRVS-HAN--EYGL 78 (479)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTSCCEEEEESS-CTTHHHHHH--------SHHHHHHHHHHHHHHHHHT-TTT--TTTB
T ss_pred cCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCC-CcCCcCccc--------CcHHHHHHHHHHHHHHHHH-hHH--hcCc
Confidence 379999999999999999999999999999997 689888642 2222111111000 00000 000 0000
Q ss_pred cCC-CCCccCCCCCCCCCCCC----CH----HHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceE
Q 024975 81 QAY-PFVARNYEGSVDLRRYP----GH----EEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVE 151 (259)
Q Consensus 81 ~~~-~~~~~~~~~~~~~~~~~----~~----~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~ 151 (259)
... +.... .....+. .. ..+...+...+.+.+++ +..+ +++.+ +.+.+.+...++ ...
T Consensus 79 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~--~~~g-~~~~i---~~~~~~v~~~~g--~~~ 145 (479)
T 2hqm_A 79 YQNLPLDKE-----HLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVD--VVFG-WARFN---KDGNVEVQKRDN--TTE 145 (479)
T ss_dssp STTSCCSGG-----GCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEE--EEEE-EEEEC---TTSCEEEEESSS--CCE
T ss_pred ccccccccc-----cCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEe-EEEEe---eCCEEEEEeCCC--cEE
Confidence 000 00000 0000000 00 12223344455566777 6655 34443 224566665443 224
Q ss_pred EEEeCEEEEccCCCCCCccC-CCCCCCCCCCceEEcccCCCCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 152 EETFDAVVVCNGHFSVPRLA-QVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 152 ~~~ad~VIlAtG~~s~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
.+.+|+||+||| +.|..| .+||.+. ..++..+... ...+++++|||+|++|+|+|..|.+.+.+|++++|.+
T Consensus 146 ~~~~d~lviAtG--s~p~~p~~i~g~~~----~~~~~~~~~l-~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 218 (479)
T 2hqm_A 146 VYSANHILVATG--GKAIFPENIPGFEL----GTDSDGFFRL-EEQPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGE 218 (479)
T ss_dssp EEEEEEEEECCC--EEECCCTTSTTGGG----SBCHHHHHHC-SSCCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred EEEeCEEEEcCC--CCCCCCCCCCCccc----ccchHHHhcc-cccCCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCC
Confidence 689999999999 788888 7887642 1222222111 1245899999999999999999999999999999987
No 62
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=99.85 E-value=1.6e-22 Score=165.71 Aligned_cols=169 Identities=20% Similarity=0.227 Sum_probs=113.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCc--EEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccc
Q 024975 1 MFRHVAVIGAGAAGLVVGHELLREGHT--VVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELM 78 (259)
Q Consensus 1 ~~~~v~IIG~G~~Gl~~a~~L~~~g~~--v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (259)
|+++|+|||||++|+++|..|++.|.+ |+|+|+.+.++.... .....+..
T Consensus 1 M~~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~---------------------~l~~~~~~------- 52 (410)
T 3ef6_A 1 MATHVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRP---------------------SLSKAVLD------- 52 (410)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSG---------------------GGGTHHHH-------
T ss_pred CCCCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCc---------------------cccHHHhC-------
Confidence 678999999999999999999999987 999999865421000 00000000
Q ss_pred eecCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEE
Q 024975 79 GFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAV 158 (259)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~V 158 (259)
..... ..... ..+...+.+++ ++.+++|+.++... +.|.+.++. .+.||+|
T Consensus 53 ----g~~~~-------~~~~~---------~~~~~~~~~i~--~~~~~~v~~id~~~---~~v~~~~g~----~~~~d~l 103 (410)
T 3ef6_A 53 ----GSLER-------PPILA---------EADWYGEARID--MLTGPEVTALDVQT---RTISLDDGT----TLSADAI 103 (410)
T ss_dssp ----TSSSS-------CCBSS---------CTTHHHHTTCE--EEESCCEEEEETTT---TEEEETTSC----EEECSEE
T ss_pred ----CCCCH-------HHhcC---------CHHHHHHCCCE--EEeCCEEEEEECCC---CEEEECCCC----EEECCEE
Confidence 00000 00000 11223456888 99999999997543 567776654 7999999
Q ss_pred EEccCCCCCCccCCCCCCCCCCCceEEcccCC-----CCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 159 VVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYR-----IPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 159 IlAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~-----~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
|+||| +.|+.|.+||... .+ ........ ......+++++|||+|++|+|+|..+.+.+.+|++++|.+
T Consensus 104 vlAtG--~~p~~~~ipG~~~-~~-v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~ 176 (410)
T 3ef6_A 104 VIATG--SRARTMALPGSQL-PG-VVTLRTYGDVQVLRDSWTSATRLLIVGGGLIGCEVATTARKLGLSVTILEAGD 176 (410)
T ss_dssp EECCC--EEECCCCCTTTTS-TT-EECCCSHHHHHHHHHHCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred EEccC--CcccCCCCCCccc-cc-eEEeccHHHHHHHHHHhccCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Confidence 99999 6788888888652 11 11111110 0012346899999999999999999999999999999998
No 63
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=99.85 E-value=5.5e-23 Score=172.06 Aligned_cols=224 Identities=15% Similarity=0.182 Sum_probs=128.2
Q ss_pred CCeEEEECCChHHHHHHHHHHH-cCCcEEEEe--------eCCCcCceeeeCCCCCCCCCCCCCCCCCcccccc-cccee
Q 024975 2 FRHVAVIGAGAAGLVVGHELLR-EGHTVVVYE--------KGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLY-KSLRV 71 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~-~g~~v~v~e--------~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 71 (259)
++||+|||||++|+++|.+|++ .|.+|+|+| +...+||+|... +|.|.+.+...... ..+.
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~~--------gciPsk~l~~~a~~~~~~~- 73 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNV--------GCVPKKLMVTGANYMDTIR- 73 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHHH--------SHHHHHHHHHHHHHHHHHH-
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccCC--------CcchhhHHHHHHHHHHHHH-
Confidence 5899999999999999999999 999999999 346688888653 33222221111111 1111
Q ss_pred ccccccceecCCCCC-ccCCCCCCCCCCCCCH----HHHHHHHHHHHHHh-CCceeEEeceeEEEEEEeCCCcEEEEEEe
Q 024975 72 NLPRELMGFQAYPFV-ARNYEGSVDLRRYPGH----EEVLRYLQNFAREF-GVDQVVRLHTEVLNARLVESNKWKVKSRK 145 (259)
Q Consensus 72 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~~-~~~~~v~~~~~v~~i~~~~~~~~~v~~~~ 145 (259)
.... +++...... .. .+....... ..+...+...+.+. +++ ++.++ ++.+. . + .+.+..
T Consensus 74 ~~~~--~g~~~~~~~~~~-----~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~--~~~g~-~~~i~--~-~--~v~v~~ 138 (490)
T 1fec_A 74 ESAG--FGWELDRESVRP-----NWKALIAAKNKAVSGINDSYEGMFADTEGLT--FHQGF-GALQD--N-H--TVLVRE 138 (490)
T ss_dssp HGGG--GTEECCGGGCEE-----CHHHHHHHHHHHHHHHHHHHHHHHHTSTTEE--EEESE-EEEEE--T-T--EEEEES
T ss_pred HHHh--cCcccCCccccc-----CHHHHHHHHHHHHHHHHHHHHHHHhcCCCcE--EEEeE-EEEee--C-C--EEEEEe
Confidence 0000 011000000 00 000000000 12222334444555 777 66664 55543 2 3 344431
Q ss_pred ---cCCc-eEEEEeCEEEEccCCCCCCccCCCCCCCCCCCceEEcccCCCCCCCCCCeEEEEccCcCHHHHHHHHhcc--
Q 024975 146 ---KDDV-VEEETFDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGF-- 219 (259)
Q Consensus 146 ---g~~~-~~~~~ad~VIlAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~a~e~a~~l~~~-- 219 (259)
.++. ...+.||+||+||| +.|..|.++|.+. ...+..+.... ..+++++|||+|++|+|+|..|.+.
T Consensus 139 ~~~~~g~~~~~~~~d~lviAtG--s~p~~p~i~g~~~----~~~~~~~~~~~-~~~~~vvViGgG~ig~E~A~~l~~~~~ 211 (490)
T 1fec_A 139 SADPNSAVLETLDTEYILLATG--SWPQHLGIEGDDL----CITSNEAFYLD-EAPKRALCVGGGYISIEFAGIFNAYKA 211 (490)
T ss_dssp SSSTTSCEEEEEEEEEEEECCC--EEECCCCSBTGGG----CBCHHHHTTCS-SCCSEEEEECSSHHHHHHHHHHHHHSC
T ss_pred eccCCCCceEEEEcCEEEEeCC--CCCCCCCCCCccc----eecHHHHhhhh-hcCCeEEEECCCHHHHHHHHHHHhhcc
Confidence 1111 14799999999999 7888888887632 12222222222 2358999999999999999999999
Q ss_pred -cCeEEEEecCCC------cccccCC---CCCCCce--EeeeeeEEeec
Q 024975 220 -AKEVHIASRSVA------DETHEKQ---PGYDNMW--LHSMVRTKKCS 256 (259)
Q Consensus 220 -~~~v~~~~r~~~------~~~~~~~---~~~~~~~--~~~~v~~~~~~ 256 (259)
+.+|++++|.+. +++.+.+ ++..++. .++.|++++..
T Consensus 212 ~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~ 260 (490)
T 1fec_A 212 RGGQVDLAYRGDMILRGFDSELRKQLTEQLRANGINVRTHENPAKVTKN 260 (490)
T ss_dssp TTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEEETCCEEEEEEC
T ss_pred CcCeEEEEEcCCCcccccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEc
Confidence 999999999872 2222222 2223444 45777777654
No 64
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.85 E-value=2e-22 Score=168.64 Aligned_cols=188 Identities=13% Similarity=0.177 Sum_probs=115.4
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceecC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQA 82 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (259)
+||+|||||++|+++|..|+++|.+|+|+|+ +.+||+|... ++.|.+.++............ ..
T Consensus 27 ~DVvVIGgG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~--------gcip~k~l~~~a~~~~~~~~~-------~~ 90 (484)
T 3o0h_A 27 FDLFVIGSGSGGVRAARLAGALGKRVAIAEE-YRIGGTCVIR--------GCVPKKLYFYASQYAQEFSKS-------IG 90 (484)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTHHHHHH--------SHHHHHHHHHHHHHHHHHHHH-------GG
T ss_pred CCEEEECcCHHHHHHHHHHHhCcCEEEEEeC-CCCCCceecc--------CccccHHHHHHHHHHHHHHHH-------Hh
Confidence 7999999999999999999999999999999 6799988653 222221111111000000000 00
Q ss_pred CCCCccCCCCCCCCCCCC--------CHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEE-ecCCceEEE
Q 024975 83 YPFVARNYEGSVDLRRYP--------GHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSR-KKDDVVEEE 153 (259)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~--------~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~-~g~~~~~~~ 153 (259)
+.+... .....+. ....+...+...+.+.+++ +..+ .+..+. . ..+.+. ++ ..+
T Consensus 91 ~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~g-~~~~i~--~---~~v~v~~~~----~~~ 153 (484)
T 3o0h_A 91 FGWKYA-----DPIFNWEKLVAAKNKEISRLEGLYREGLQNSNVH--IYES-RAVFVD--E---HTLELSVTG----ERI 153 (484)
T ss_dssp GTBCCC-----CCEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EEES-CEEEEE--T---TEEEETTTC----CEE
T ss_pred CCcccC-----CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEe-EEEEee--C---CEEEEecCC----eEE
Confidence 111000 0000000 0023344455566666887 6555 444443 1 244443 32 379
Q ss_pred EeCEEEEccCCCCCCc-cCCCCCCCCCCCceEEcccCCCCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 154 TFDAVVVCNGHFSVPR-LAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 154 ~ad~VIlAtG~~s~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
.+|++|+||| +.|. .|.++|.... .....+... ...+++++|+|+|++|+|+|..+.+.+.+|+++.|.+
T Consensus 154 ~~d~lviAtG--~~p~~~p~i~G~~~~----~~~~~~~~~-~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~ 224 (484)
T 3o0h_A 154 SAEKILIATG--AKIVSNSAIKGSDLC----LTSNEIFDL-EKLPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGD 224 (484)
T ss_dssp EEEEEEECCC--EEECCC--CBTGGGS----BCTTTGGGC-SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred EeCEEEEccC--CCcccCCCCCCcccc----ccHHHHHhH-HhcCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCC
Confidence 9999999999 6787 8888886531 111122111 2246899999999999999999999999999999987
No 65
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.85 E-value=9.2e-23 Score=169.09 Aligned_cols=194 Identities=15% Similarity=0.235 Sum_probs=115.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCcccccc-ccceecccccccee
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLY-KSLRVNLPRELMGF 80 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 80 (259)
++||+|||||++|+++|.+|++.|.+|+|+|++ .+||.|... +|.|.+.+.....+ ..+...........
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~--------gciP~k~l~~~a~~~~~~~~~~~~~g~~~ 74 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMYGQKCALIEAK-ELGGTCVNV--------GCVPKKVMWHAAQIREAIHMYGPDYGFDT 74 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS-CTTHHHHHH--------SHHHHHHHHHHHHHHHHHHTTGGGGTEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC-CCCCccccc--------CccChHHHHHHHHHHHHHHHHHHhcCccC
Confidence 489999999999999999999999999999997 689988643 22222211111100 00000000000000
Q ss_pred c--CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEE
Q 024975 81 Q--AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAV 158 (259)
Q Consensus 81 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~V 158 (259)
. ...+.... .....+ ...+...+...+.+.+++ ++.++ ++.+. . ..|.+ ++ ..+.||+|
T Consensus 75 ~~~~~~~~~l~----~~~~~~--~~~~~~~~~~~~~~~~v~--~~~g~-~~~i~--~---~~v~~-~g----~~~~~d~l 135 (450)
T 1ges_A 75 TINKFNWETLI----ASRTAY--IDRIHTSYENVLGKNNVD--VIKGF-ARFVD--A---KTLEV-NG----ETITADHI 135 (450)
T ss_dssp EEEEECHHHHH----HHHHHH--HHHHHHHHHHHHHHTTCE--EEESC-CEEEE--T---TEEEE-TT----EEEEEEEE
T ss_pred CCCccCHHHHH----HHHHHH--HHHHHHHHHHHHHhCCCE--EEEeE-EEEec--C---CEEEE-CC----EEEEeCEE
Confidence 0 00000000 000000 012223334444566887 66653 44442 2 24444 32 37999999
Q ss_pred EEccCCCCCCccCCCCCCCCCCCceEEcccCCCCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 159 VVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 159 IlAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
|+||| +.|..|.+||.+. ..++..+.... ..+++++|||+|++|+|+|..|.+.+.+|++++|.+
T Consensus 136 viAtG--s~p~~p~i~g~~~----~~~~~~~~~~~-~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 200 (450)
T 1ges_A 136 LIATG--GRPSHPDIPGVEY----GIDSDGFFALP-ALPERVAVVGAGYIGVELGGVINGLGAKTHLFEMFD 200 (450)
T ss_dssp EECCC--EEECCCCSTTGGG----SBCHHHHHHCS-SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred EECCC--CCCCCCCCCCccc----eecHHHhhhhh-hcCCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 99999 7888888888642 12222222111 235899999999999999999999999999999987
No 66
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=99.85 E-value=2.4e-21 Score=160.88 Aligned_cols=200 Identities=19% Similarity=0.237 Sum_probs=125.2
Q ss_pred CeEEEECCChHHHHHHHHHHHc--CCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceecccccccee
Q 024975 3 RHVAVIGAGAAGLVVGHELLRE--GHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGF 80 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~--g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (259)
+||+|||||++|+++|..|++. |.+|+|+|+.+.++.... .+. .+. .. . +
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~-----------------~~~--~~~--~g-----~--~ 52 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSC-----------------GIA--LYL--GK-----E--I 52 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGG-----------------GHH--HHH--TT-----C--B
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccc-----------------cch--hhh--cC-----C--c
Confidence 5899999999999999999998 999999999865421000 000 000 00 0 0
Q ss_pred cCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEE
Q 024975 81 QAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVV 160 (259)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIl 160 (259)
....+ .++...+.+.+.+.+++ ++.+++|+.++..+ +.+.+.... ++....+.+|+||+
T Consensus 53 ~~~~~-----------------~~~~~~~~~~~~~~gv~--~~~~~~v~~i~~~~-~~v~v~~~~-~g~~~~~~~d~lvi 111 (452)
T 2cdu_A 53 KNNDP-----------------RGLFYSSPEELSNLGAN--VQMRHQVTNVDPET-KTIKVKDLI-TNEEKTEAYDKLIM 111 (452)
T ss_dssp GGGCG-----------------GGGBSCCHHHHHHTTCE--EEESEEEEEEEGGG-TEEEEEETT-TCCEEEEECSEEEE
T ss_pred ccCCH-----------------HHhhhcCHHHHHHcCCE--EEeCCEEEEEEcCC-CEEEEEecC-CCceEEEECCEEEE
Confidence 00000 01111112334467888 88899999987654 444443211 12224799999999
Q ss_pred ccCCCCCCccCCCCCCCCCCCceEEcccCCCC-----CCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCCC----
Q 024975 161 CNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIP-----NPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA---- 231 (259)
Q Consensus 161 AtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~-----~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~~---- 231 (259)
||| +.|..|.++|... . ...+...+... ....+++++|||+|++|+|+|..|.+.+.+|++++|.+.
T Consensus 112 AtG--s~p~~p~i~g~~~-~-~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~ 187 (452)
T 2cdu_A 112 TTG--SKPTVPPIPGIDS-S-RVYLCKNYNDAKKLFEEAPKAKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYK 187 (452)
T ss_dssp CCC--EEECCCCCTTTTS-T-TEEECSSHHHHHHHHHHGGGCSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTT
T ss_pred ccC--CCcCCCCCCCCCC-C-CEEEeCcHHHHHHHHHHhccCCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhh
Confidence 999 7888888888753 1 22322111111 112468999999999999999999999999999999872
Q ss_pred ---cccccCC---C--CCCCceEeeeeeEEee
Q 024975 232 ---DETHEKQ---P--GYDNMWLHSMVRTKKC 255 (259)
Q Consensus 232 ---~~~~~~~---~--~~~~~~~~~~v~~~~~ 255 (259)
+++.+.+ + ....++.++.|++++.
T Consensus 188 ~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~ 219 (452)
T 2cdu_A 188 YFDKEFTDILAKDYEAHGVNLVLGSKVAAFEE 219 (452)
T ss_dssp TSCHHHHHHHHHHHHHTTCEEEESSCEEEEEE
T ss_pred hhhhhHHHHHHHHHHHCCCEEEcCCeeEEEEc
Confidence 1221111 1 1234455677887765
No 67
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=99.85 E-value=1.1e-21 Score=161.84 Aligned_cols=201 Identities=12% Similarity=0.100 Sum_probs=124.8
Q ss_pred CeEEEECCChHHHHHHHHHHHcC--CcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceecccccccee
Q 024975 3 RHVAVIGAGAAGLVVGHELLREG--HTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGF 80 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g--~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (259)
++|+||||||+|+++|..|++.| .+|+|+|+++..+.... ..+.+..
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~----------------------~l~~~~~--------- 49 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANC----------------------ALPYVIG--------- 49 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGG----------------------GHHHHHT---------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcc----------------------hhHHHHc---------
Confidence 47999999999999999999987 47999999864421100 0000000
Q ss_pred cCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEec-CCceEEEEeCEEE
Q 024975 81 QAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKK-DDVVEEETFDAVV 159 (259)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g-~~~~~~~~ad~VI 159 (259)
...... ...... ...++.++.+++ ++.+++|+.++... +. +.+..+ ++....+.||++|
T Consensus 50 -~~~~~~-------~~~~~~-------~~~~~~~~~~i~--~~~~~~V~~id~~~-~~--~~~~~~~~~~~~~~~yd~lV 109 (437)
T 4eqs_A 50 -EVVEDR-------RYALAY-------TPEKFYDRKQIT--VKTYHEVIAINDER-QT--VSVLNRKTNEQFEESYDKLI 109 (437)
T ss_dssp -TSSCCG-------GGTBCC-------CHHHHHHHHCCE--EEETEEEEEEETTT-TE--EEEEETTTTEEEEEECSEEE
T ss_pred -CCccch-------hhhhhc-------CHHHHHHhcCCE--EEeCCeEEEEEccC-cE--EEEEeccCCceEEEEcCEEE
Confidence 000000 000000 012344567888 88999999987654 33 333332 2444678999999
Q ss_pred EccCCCCCCccCCCCCCCCCCCceEEcccCCCC--CCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCC------C
Q 024975 160 VCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIP--NPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSV------A 231 (259)
Q Consensus 160 lAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~------~ 231 (259)
+||| +.|+.|.+++...+............. .....++++|+|+|++|+|+|..+.+.+.+||+++|.+ +
T Consensus 110 IATG--s~p~~p~i~g~~~~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~~d 187 (437)
T 4eqs_A 110 LSPG--ASANSLGFESDITFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLMD 187 (437)
T ss_dssp ECCC--EEECCCCCCCTTEECCSSHHHHHHHHHHHHHHTCCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTTSC
T ss_pred ECCC--CccccccccCceEEeeccHHHHHHHHHhhhccCCcEEEEECCccchhhhHHHHHhcCCcceeeeeecccccccc
Confidence 9999 778888887754322211111100000 01135789999999999999999999999999999998 2
Q ss_pred cccccCC-----CCCCCceEeeeeeEEeec
Q 024975 232 DETHEKQ-----PGYDNMWLHSMVRTKKCS 256 (259)
Q Consensus 232 ~~~~~~~-----~~~~~~~~~~~v~~~~~~ 256 (259)
+++.+.+ .....+..++.|+++++.
T Consensus 188 ~~~~~~~~~~l~~~gV~i~~~~~v~~~~~~ 217 (437)
T 4eqs_A 188 ADMNQPILDELDKREIPYRLNEEINAINGN 217 (437)
T ss_dssp GGGGHHHHHHHHHTTCCEEESCCEEEEETT
T ss_pred chhHHHHHHHhhccceEEEeccEEEEecCC
Confidence 3333222 122456667788777654
No 68
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.84 E-value=4.8e-22 Score=160.46 Aligned_cols=163 Identities=21% Similarity=0.327 Sum_probs=110.0
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceecC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQA 82 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (259)
-|++|||||++|+++|..|++.| +|+|+|+++.+. +. +..+.. .+ . +.
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~--~~---------------~~~l~~----~~-----~---g~-- 56 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPY--YS---------------KPMLSH----YI-----A---GF-- 56 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCC--CC---------------STTHHH----HH-----T---TS--
T ss_pred CcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCc--cc---------------cchhHH----HH-----h---CC--
Confidence 58999999999999999999999 999999976431 00 000000 00 0 00
Q ss_pred CCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEcc
Q 024975 83 YPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVCN 162 (259)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlAt 162 (259)
..+ +++..+..+.+.+.+++ ++.+++|+.++.. .+.|. .++. .+.||+||+||
T Consensus 57 ~~~-----------------~~~~~~~~~~~~~~~v~--~~~g~~v~~id~~---~~~V~-~~g~----~~~~d~lViAT 109 (367)
T 1xhc_A 57 IPR-----------------NRLFPYSLDWYRKRGIE--IRLAEEAKLIDRG---RKVVI-TEKG----EVPYDTLVLAT 109 (367)
T ss_dssp SCG-----------------GGGCSSCHHHHHHHTEE--EECSCCEEEEETT---TTEEE-ESSC----EEECSEEEECC
T ss_pred CCH-----------------HHhccCCHHHHHhCCcE--EEECCEEEEEECC---CCEEE-ECCc----EEECCEEEECC
Confidence 000 11111123334567888 8888889988753 35666 5443 79999999999
Q ss_pred CCCCCCccCCCCCCCCCCCceEEcccCCCCCCC-----CCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 163 GHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPF-----QDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 163 G~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-----~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
| +.|+.|.+||.+ ...+.......... ++++++|||+|++|+|+|..|.+.+.+|++++|.+
T Consensus 110 G--s~p~~p~i~G~~----~v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 176 (367)
T 1xhc_A 110 G--ARAREPQIKGKE----YLLTLRTIFDADRIKESIENSGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGA 176 (367)
T ss_dssp C--EEECCCCSBTGG----GEECCCSHHHHHHHHHHHHHHSEEEEEECSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred C--CCCCCCCCCCcC----CEEEEcCHHHHHHHHHHhhcCCcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCC
Confidence 9 788888888732 12221111111001 34899999999999999999999999999999987
No 69
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.84 E-value=1.8e-21 Score=161.76 Aligned_cols=187 Identities=16% Similarity=0.223 Sum_probs=116.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCcccc-ccccceecccccccee
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSS-LYKSLRVNLPRELMGF 80 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 80 (259)
++||+|||||++|+++|..|++.|.+|+|+|+ +.+||+|... ++.|.+.++... .+..+........++
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~~~--------g~~Psk~l~~~~~~~~~~~~~~~~~~~g- 74 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCLNI--------GCIPSKALIHVAEQFHQASRFTEPSPLG- 74 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHHHH--------SHHHHHHHHHHHHHHHHHHHTTSCCTTC-
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCCCc--------CcHhHHHHHHHHHHHHHHhhcccccccC-
Confidence 48999999999999999999999999999999 6799998643 222221111110 111111000000000
Q ss_pred cCCCCCccCCCCCCCCCCCCCHHHHHH-----------HHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCc
Q 024975 81 QAYPFVARNYEGSVDLRRYPGHEEVLR-----------YLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDV 149 (259)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~ 149 (259)
.+. ........++.. .+...+.+.+++ ++.++.+. + .+ ++|.+.+
T Consensus 75 --~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~--~~~g~~~~-~--~~---~~v~v~~---- 130 (458)
T 1lvl_A 75 --ISV----------ASPRLDIGQSVAWKDGIVDRLTTGVAALLKKHGVK--VVHGWAKV-L--DG---KQVEVDG---- 130 (458)
T ss_dssp --CCC----------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EECSCEEE-E--ET---TEEEETT----
T ss_pred --ccc----------CCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcE--EEEEEEEE-c--cC---CEEEEee----
Confidence 000 000111122222 234555667888 77776543 2 22 3455533
Q ss_pred eEEEEeCEEEEccCCCCCCccCC-CCCCCCCCCceEEcccCCCCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEec
Q 024975 150 VEEETFDAVVVCNGHFSVPRLAQ-VPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASR 228 (259)
Q Consensus 150 ~~~~~ad~VIlAtG~~s~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r 228 (259)
..+.||+||+||| +.|..|+ ++ .. +...+...+..... .+++++|||+|++|+|+|..|.+.+.+|++++|
T Consensus 131 -~~~~~d~lviATG--s~p~~~~~~~-~~---~~v~~~~~~~~~~~-~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~ 202 (458)
T 1lvl_A 131 -QRIQCEHLLLATG--SSSVELPMLP-LG---GPVISSTEALAPKA-LPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEA 202 (458)
T ss_dssp -EEEECSEEEECCC--EEECCBTTBC-CB---TTEECHHHHTCCSS-CCSEEEEECCSHHHHHHHHHHHHHTCEEEEECS
T ss_pred -EEEEeCEEEEeCC--CCCCCCCCCC-cc---CcEecHHHHhhhhc-cCCeEEEECcCHHHHHHHHHHHHCCCeEEEEEc
Confidence 3799999999999 6676654 44 22 23344444433322 458999999999999999999999999999999
Q ss_pred CC
Q 024975 229 SV 230 (259)
Q Consensus 229 ~~ 230 (259)
.+
T Consensus 203 ~~ 204 (458)
T 1lvl_A 203 RE 204 (458)
T ss_dssp SS
T ss_pred CC
Confidence 87
No 70
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.84 E-value=1.2e-21 Score=161.06 Aligned_cols=195 Identities=17% Similarity=0.167 Sum_probs=125.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCc--EEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccce
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHT--VVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMG 79 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~--v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (259)
++||+|||||++|+++|..|++.|.+ |+|+|+.+.+...... ....+..
T Consensus 9 ~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~---------------------l~~~~~~-------- 59 (415)
T 3lxd_A 9 RADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERPP---------------------LSKEYLA-------- 59 (415)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSGG---------------------GGTTTTT--------
T ss_pred CCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCccc---------------------CCHHHHc--------
Confidence 36999999999999999999999987 9999998643211000 0000000
Q ss_pred ecCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEE
Q 024975 80 FQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVV 159 (259)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VI 159 (259)
... ....+.....+...+.+++ ++.+++|+.++.. .+.|.+.++. .+.||++|
T Consensus 60 ---~~~---------------~~~~~~~~~~~~~~~~~i~--~~~~~~v~~id~~---~~~v~~~~g~----~~~~d~lv 112 (415)
T 3lxd_A 60 ---REK---------------TFERICIRPAQFWEDKAVE--MKLGAEVVSLDPA---AHTVKLGDGS----AIEYGKLI 112 (415)
T ss_dssp ---TSS---------------CSGGGBSSCHHHHHHTTEE--EEETCCEEEEETT---TTEEEETTSC----EEEEEEEE
T ss_pred ---CCC---------------CHHHhccCCHHHHHHCCcE--EEeCCEEEEEECC---CCEEEECCCC----EEEeeEEE
Confidence 000 0011111223444567888 8899999998754 3567776654 79999999
Q ss_pred EccCCCCCCccCCCCCCCCCCCceEEcccCCC-----CCCCC-CCeEEEEccCcCHHHHHHHHhcccCeEEEEecCCC--
Q 024975 160 VCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRI-----PNPFQ-DQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA-- 231 (259)
Q Consensus 160 lAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~-----~~~~~-~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~~-- 231 (259)
+||| +.|+.|.++|... .+ ......... ..... +++++|||+|++|+|+|..+.+.+.+|+++++.+.
T Consensus 113 lAtG--~~~~~~~i~g~~~-~~-v~~~~~~~d~~~l~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l 188 (415)
T 3lxd_A 113 WATG--GDPRRLSCVGADL-AG-VHAVRTKEDADRLMAELDAGAKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVL 188 (415)
T ss_dssp ECCC--EECCCCBTTSSCC-BT-EECCCSHHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTT
T ss_pred EccC--CccCCCCCCCccc-cC-EEEEcCHHHHHHHHHHhhhcCCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchh
Confidence 9999 7888888888653 11 111000000 00112 68999999999999999999999999999999882
Q ss_pred -----ccccc---CCCCC--CCceEeeeeeEEeec
Q 024975 232 -----DETHE---KQPGY--DNMWLHSMVRTKKCS 256 (259)
Q Consensus 232 -----~~~~~---~~~~~--~~~~~~~~v~~~~~~ 256 (259)
+++.+ +..+. ..+..++.|++++..
T Consensus 189 ~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~ 223 (415)
T 3lxd_A 189 ARVAGEALSEFYQAEHRAHGVDLRTGAAMDCIEGD 223 (415)
T ss_dssp TTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEES
T ss_pred hhhcCHHHHHHHHHHHHhCCCEEEECCEEEEEEec
Confidence 11111 11222 344445778777654
No 71
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=99.84 E-value=3.4e-21 Score=159.73 Aligned_cols=172 Identities=19% Similarity=0.195 Sum_probs=113.2
Q ss_pred CeEEEECCChHHHHHHHHHHHc--CCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceecccccccee
Q 024975 3 RHVAVIGAGAAGLVVGHELLRE--GHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGF 80 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~--g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (259)
+||+|||||++|+++|..|++. |.+|+|+|+.+.++. .. + ....+.. .
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~--~~----------~----------~~~~~~~---~----- 50 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISF--LS----------A----------GMQLYLE---G----- 50 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSB--CG----------G----------GHHHHHT---T-----
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCc--cc----------c----------cchhhhc---C-----
Confidence 4899999999999999999998 899999999875431 00 0 0000000 0
Q ss_pred cCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEe-cCCceEEEEeCEEE
Q 024975 81 QAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRK-KDDVVEEETFDAVV 159 (259)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~-g~~~~~~~~ad~VI 159 (259)
... ...++..++.+.+.+.+++ ++.+++|+.+...+ +.+ .+.+ .+++...+.||+||
T Consensus 51 -~~~----------------~~~~~~~~~~~~~~~~gv~--~~~~~~v~~i~~~~-~~v--~~~~~~~g~~~~~~~d~lv 108 (447)
T 1nhp_A 51 -KVK----------------DVNSVRYMTGEKMESRGVN--VFSNTEITAIQPKE-HQV--TVKDLVSGEERVENYDKLI 108 (447)
T ss_dssp -SSC----------------CGGGSBSCCHHHHHHTTCE--EEETEEEEEEETTT-TEE--EEEETTTCCEEEEECSEEE
T ss_pred -ccC----------------CHHHhhcCCHHHHHHCCCE--EEECCEEEEEeCCC-CEE--EEEecCCCceEEEeCCEEE
Confidence 000 0011111122334456888 88899999987654 434 4433 11222358999999
Q ss_pred EccCCCCCCccCCCCCCCCCCCceEEcccCCCC-------CCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 160 VCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIP-------NPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 160 lAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~-------~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
+||| +.|..|.+||... .+ ..+...+... ....+++++|||+|++|+|+|..|.+.+.+|++++|.+
T Consensus 109 iAtG--~~p~~p~i~G~~~-~~-v~~~~~~~~~~~l~~~~~~~~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 182 (447)
T 1nhp_A 109 ISPG--AVPFELDIPGKDL-DN-IYLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILD 182 (447)
T ss_dssp ECCC--EEECCCCSTTTTS-BS-EECCCHHHHHHHHHHHHTCTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred EcCC--CCcCCCCCCCCCC-CC-eEEECCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCc
Confidence 9999 7788888888752 12 2222111110 11146899999999999999999999999999999987
No 72
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=99.83 E-value=1.7e-21 Score=166.99 Aligned_cols=194 Identities=19% Similarity=0.275 Sum_probs=113.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeC-C-------CcCceeeeCCCCCCCCCCCCCCCCCccccccccceecc
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKG-E-------QVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNL 73 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~-~-------~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (259)
.+||+||||||+|+++|..|++.|.+|+|||+. + .+||+|... ++.|.+.+.............
T Consensus 107 ~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~~~~--------g~iP~~~l~~~~~~~~~~~~~ 178 (598)
T 2x8g_A 107 DYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNV--------GCIPKKLMHQAGLLSHALEDA 178 (598)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHHHHH--------SHHHHHHHHHHHHHHHHHHHH
T ss_pred cccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceEecc--------CCCchHHHHHHHHHHHHHhhH
Confidence 589999999999999999999999999999973 2 366766432 111111000000000000000
Q ss_pred ccccceecCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHH-----------HHhCCceeEEeceeEEEEEEeCCCcEEEE
Q 024975 74 PRELMGFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFA-----------REFGVDQVVRLHTEVLNARLVESNKWKVK 142 (259)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----------~~~~~~~~v~~~~~v~~i~~~~~~~~~v~ 142 (259)
..+.+... .........++.+++...+ ...+++ +..+ .+..+. .+.+.
T Consensus 179 -------~~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~--~~~~-~~~~~~-----~~~v~ 237 (598)
T 2x8g_A 179 -------EHFGWSLD------RSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVT--YLNA-KGRLIS-----PHEVQ 237 (598)
T ss_dssp -------HHTTCCCC------GGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EECS-EEEEEE-----TTEEE
T ss_pred -------HhCCcccc------CCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcE--EEEE-EEEEcC-----CCEEE
Confidence 00100000 0000112244555544332 233555 4332 333332 23444
Q ss_pred EEecCCceEEEEeCEEEEccCCCCCCccCCCCCCCCCCCceEEcccCCCCCCCCCCeEEEEccCcCHHHHHHHHhcccCe
Q 024975 143 SRKKDDVVEEETFDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKE 222 (259)
Q Consensus 143 ~~~g~~~~~~~~ad~VIlAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~ 222 (259)
+...++....+.||+||+||| +.|+.|.+||...+ ..+...+... ...+++++|||+|++|+|+|..|.+.|.+
T Consensus 238 v~~~~g~~~~~~~d~lviAtG--s~p~~p~i~G~~~~---~~~~~~~~~~-~~~~~~vvViGgG~~g~E~A~~l~~~g~~ 311 (598)
T 2x8g_A 238 ITDKNQKVSTITGNKIILATG--ERPKYPEIPGAVEY---GITSDDLFSL-PYFPGKTLVIGASYVALECAGFLASLGGD 311 (598)
T ss_dssp EECTTCCEEEEEEEEEEECCC--EEECCCSSTTHHHH---CEEHHHHTTC-SSCCCSEEEECCSHHHHHHHHHHHHTTCC
T ss_pred EEeCCCCeEEEEeCEEEEeCC--CCCCCCCCCCcccc---eEcHHHHhhC-ccCCCEEEEECCCHHHHHHHHHHHHcCCE
Confidence 443333334689999999999 78888888886432 2233222222 23457899999999999999999999999
Q ss_pred EEEEecCC
Q 024975 223 VHIASRSV 230 (259)
Q Consensus 223 v~~~~r~~ 230 (259)
|++++|+.
T Consensus 312 Vtlv~~~~ 319 (598)
T 2x8g_A 312 VTVMVRSI 319 (598)
T ss_dssp EEEEESSC
T ss_pred EEEEECCc
Confidence 99999973
No 73
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=99.83 E-value=1.2e-20 Score=154.42 Aligned_cols=164 Identities=15% Similarity=0.140 Sum_probs=111.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCC--cEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccce
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGH--TVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMG 79 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~--~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (259)
.+||+|||||++|+++|..|++.|. +|+|+|+.+.++... ......+...
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~---------------------~~~~~~~~~~------- 58 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDR---------------------PPLSKDFMAH------- 58 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBCS---------------------GGGGTHHHHH-------
T ss_pred CCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcccC---------------------CCCCHHHhCC-------
Confidence 4799999999999999999999987 599999976432000 0000000000
Q ss_pred ecCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEE
Q 024975 80 FQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVV 159 (259)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VI 159 (259)
..+ .. .+. . .+.+.+++ ++.+++|+.++.. .+.|.+.++. .+.+|+||
T Consensus 59 --~~~--~~---------~~~--~--------~~~~~~v~--~~~~~~v~~i~~~---~~~v~~~~g~----~~~~d~lv 106 (408)
T 2gqw_A 59 --GDA--EK---------IRL--D--------CKRAPEVE--WLLGVTAQSFDPQ---AHTVALSDGR----TLPYGTLV 106 (408)
T ss_dssp --CCG--GG---------SBC--C--------CTTSCSCE--EEETCCEEEEETT---TTEEEETTSC----EEECSEEE
T ss_pred --Cch--hh---------hhH--H--------HHHHCCCE--EEcCCEEEEEECC---CCEEEECCCC----EEECCEEE
Confidence 000 00 000 0 12345777 8889889998753 3567776554 79999999
Q ss_pred EccCCCCCCccCCC-CCCCCCCCceEEcccCC-----CCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 160 VCNGHFSVPRLAQV-PGIDSWPGKQMHSHNYR-----IPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 160 lAtG~~s~~~~~~~-~g~~~~~~~~~~~~~~~-----~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
+||| +.|..|.+ +|.. .+ ..+..... ......+++++|||+|++|+|+|..|.+.+.+|++++|.+
T Consensus 107 iAtG--~~~~~~~i~~G~~--~~-v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 178 (408)
T 2gqw_A 107 LATG--AAPRALPTLQGAT--MP-VHTLRTLEDARRIQAGLRPQSRLLIVGGGVIGLELAATARTAGVHVSLVETQP 178 (408)
T ss_dssp ECCC--EEECCCGGGTTCS--SC-EEECCSHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred ECCC--CCCCCCCccCCCC--Cc-EEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCC
Confidence 9999 67888888 8865 22 22211110 1112246899999999999999999999999999999987
No 74
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=99.83 E-value=3.8e-21 Score=160.64 Aligned_cols=174 Identities=21% Similarity=0.301 Sum_probs=113.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHc--CCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccce
Q 024975 2 FRHVAVIGAGAAGLVVGHELLRE--GHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMG 79 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~--g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (259)
|+||+|||||++|+++|..|++. |.+|+|+|+.+.++....- ...+..
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~----------------------~~~~~~-------- 85 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCG----------------------LPYVIS-------- 85 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGG----------------------HHHHHT--------
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCC----------------------cchhhc--------
Confidence 47999999999999999999996 8999999998754311000 000000
Q ss_pred ecCCCCCccCCCCCCCCCCCCCHHHHHH-HHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEE
Q 024975 80 FQAYPFVARNYEGSVDLRRYPGHEEVLR-YLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAV 158 (259)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~V 158 (259)
. .. ....++.. +...+.+..+++ ++.+++|+.++..+ +.+.+... .+++...+.||+|
T Consensus 86 --~-~~--------------~~~~~l~~~~~~~~~~~~gv~--~~~~~~v~~i~~~~-~~v~v~~~-~~g~~~~~~~d~l 144 (480)
T 3cgb_A 86 --G-AI--------------ASTEKLIARNVKTFRDKYGID--AKVRHEVTKVDTEK-KIVYAEHT-KTKDVFEFSYDRL 144 (480)
T ss_dssp --T-SS--------------SCGGGGBSSCHHHHHHTTCCE--EESSEEEEEEETTT-TEEEEEET-TTCCEEEEECSEE
T ss_pred --C-Cc--------------CCHHHhhhcCHHHHHhhcCCE--EEeCCEEEEEECCC-CEEEEEEc-CCCceEEEEcCEE
Confidence 0 00 00011111 122233445888 88889999998654 44444331 1222246899999
Q ss_pred EEccCCCCCCccCCCCCCCCCCCceEEcccCCCC-------CCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 159 VVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIP-------NPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 159 IlAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~-------~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
|+||| +.|..|.++|.+. .+ ..+....... ....+++++|||+|++|+|+|..|.+.+.+|++++|.+
T Consensus 145 viAtG--~~p~~p~i~G~~~-~~-v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 219 (480)
T 3cgb_A 145 LIATG--VRPVMPEWEGRDL-QG-VHLLKTIPDAERILKTLETNKVEDVTIIGGGAIGLEMAETFVELGKKVRMIERND 219 (480)
T ss_dssp EECCC--EEECCCCCBTTTS-BT-EECCSSHHHHHHHHHHHHSSCCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGG
T ss_pred EECCC--CcccCCCCCCccC-CC-EEEeCCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCC
Confidence 99999 7888888888753 11 2221111100 01146899999999999999999999999999999987
No 75
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.83 E-value=4.9e-21 Score=158.49 Aligned_cols=160 Identities=22% Similarity=0.314 Sum_probs=112.5
Q ss_pred CCeEEEECCChHHHHHHHHHHH-c------CCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccc
Q 024975 2 FRHVAVIGAGAAGLVVGHELLR-E------GHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLP 74 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~-~------g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (259)
++||+||||||+|+++|..|.+ . +.+|+|||+.+.++|.|.+. +.+
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~~g---------v~p------------------ 55 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSG---------VAP------------------ 55 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHHT---------SCT------------------
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccccc---------cCC------------------
Confidence 4799999999999999999999 7 99999999998888877541 100
Q ss_pred cccceecCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEE
Q 024975 75 RELMGFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEET 154 (259)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ 154 (259)
.++...++..++.+.+.+.+++ ++.+..+ . .. |.++++ .+.
T Consensus 56 -----------------------~~~~~~~~~~~~~~~~~~~~v~--~~~~v~v------~-~~--v~~~~~-----~~~ 96 (456)
T 1lqt_A 56 -----------------------DHPKIKSISKQFEKTAEDPRFR--FFGNVVV------G-EH--VQPGEL-----SER 96 (456)
T ss_dssp -----------------------TCTGGGGGHHHHHHHHTSTTEE--EEESCCB------T-TT--BCHHHH-----HHH
T ss_pred -----------------------CCCCHHHHHHHHHHHHhcCCCE--EEeeEEE------C-CE--EEECCC-----eEe
Confidence 0111145666777777667776 6655432 1 22 223332 378
Q ss_pred eCEEEEccCCCCCCccCCCCCCCCCCCceEEcccC-----------CCCCCCCCCeEEEEccCcCHHHHHHHHhcc----
Q 024975 155 FDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNY-----------RIPNPFQDQVVILIGHYASGLDIKRDLAGF---- 219 (259)
Q Consensus 155 ad~VIlAtG~~s~~~~~~~~g~~~~~~~~~~~~~~-----------~~~~~~~~~~v~viG~G~~a~e~a~~l~~~---- 219 (259)
||+||+|||. ..++.+.+||.+ +.+ ..+...+ .......+++|+|||+|++|+|+|..|.+.
T Consensus 97 ~d~lViAtG~-~~~~~~~ipG~~-~~g-v~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIG~G~~g~e~A~~L~~~~~~l 173 (456)
T 1lqt_A 97 YDAVIYAVGA-QSDRMLNIPGED-LPG-SIAAVDFVGWYNAHPHFEQVSPDLSGARAVVIGNGNVALDVARILLTDPDVL 173 (456)
T ss_dssp SSEEEECCCC-CEECCCCCTTTT-STT-EEEHHHHHHHHTTCGGGTTCCCCCCSSEEEEECCSHHHHHHHHHHHSCHHHH
T ss_pred CCEEEEeeCC-CCCCCCCCCCCC-CCC-cEEHHHHHhhhhcCcccccchhhcCCCEEEEECCCHHHHHHHHHHHhhhhhh
Confidence 9999999994 236777888876 333 2332221 122233679999999999999999999874
Q ss_pred ----------------c-CeEEEEecCC
Q 024975 220 ----------------A-KEVHIASRSV 230 (259)
Q Consensus 220 ----------------~-~~v~~~~r~~ 230 (259)
+ .+|+++.|++
T Consensus 174 ~~tdi~~~~~~~l~~~g~~~V~lv~r~~ 201 (456)
T 1lqt_A 174 ARTDIADHALESLRPRGIQEVVIVGRRG 201 (456)
T ss_dssp TTSCCCHHHHHHHTTCCCCEEEEECSSC
T ss_pred cCCCccHHHHHHHHHCCCcEEEEEecCC
Confidence 3 5899999987
No 76
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.83 E-value=6.3e-21 Score=157.66 Aligned_cols=160 Identities=23% Similarity=0.279 Sum_probs=114.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
.+||+||||||+|+++|..|++.|++|+|||+.+.+||.+.+. . +
T Consensus 122 ~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~~g---------i--------------------------p 166 (456)
T 2vdc_G 122 GLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVYG---------I--------------------------P 166 (456)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHHHT---------S--------------------------C
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeeeec---------C--------------------------C
Confidence 4789999999999999999999999999999999888877641 0 0
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEc
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlA 161 (259)
.+. .+ .++..+..+.+.+.+++ ++.++.|. . .+.+++. ...||+||+|
T Consensus 167 ~~~--------------~~--~~~~~~~~~~l~~~gv~--~~~~~~v~-------~--~v~~~~~-----~~~~d~vvlA 214 (456)
T 2vdc_G 167 GFK--------------LE--KSVVERRVKLLADAGVI--YHPNFEVG-------R--DASLPEL-----RRKHVAVLVA 214 (456)
T ss_dssp TTT--------------SC--HHHHHHHHHHHHHTTCE--EETTCCBT-------T--TBCHHHH-----HSSCSEEEEC
T ss_pred Ccc--------------CC--HHHHHHHHHHHHHCCcE--EEeCCEec-------c--EEEhhHh-----HhhCCEEEEe
Confidence 000 11 55666777777888998 88877642 1 1122221 2569999999
Q ss_pred cCCCCCCccCCCCCCCCCCCceEEccc---------CCC--------CCCCCCCeEEEEccCcCHHHHHHHHhcccC-eE
Q 024975 162 NGHFSVPRLAQVPGIDSWPGKQMHSHN---------YRI--------PNPFQDQVVILIGHYASGLDIKRDLAGFAK-EV 223 (259)
Q Consensus 162 tG~~s~~~~~~~~g~~~~~~~~~~~~~---------~~~--------~~~~~~~~v~viG~G~~a~e~a~~l~~~~~-~v 223 (259)
||.+ .++.+.++|... .+ ...... +.. .....+++|+|||+|.+|+|+|..+.+.+. +|
T Consensus 215 tG~~-~~~~~~ipG~~~-~g-v~~a~~~l~~~~~~~~~~~~~~~~~g~~~~~gk~VvVIGgG~~a~d~A~~~~r~Ga~~V 291 (456)
T 2vdc_G 215 TGVY-KARDIKAPGSGL-GN-IVAALDYLTTSNKVSLGDTVEAYENGSLNAAGKHVVVLGGGDTAMDCVRTAIRQGATSV 291 (456)
T ss_dssp CCCC-EECCTTCSCCTT-TT-EEEHHHHHHHHHHHHCTTTCSSCCTTCSCCCCSEEEEECSSHHHHHHHHHHHHTTCSEE
T ss_pred cCCC-CCCCCCCCCCcC-CC-cEEHHHHHHHhhhhhcccccccccccccccCCCEEEEECCChhHHHHHHHHHHcCCCEE
Confidence 9952 466777888652 22 221111 111 122467999999999999999999998876 59
Q ss_pred EEEecCCC
Q 024975 224 HIASRSVA 231 (259)
Q Consensus 224 ~~~~r~~~ 231 (259)
++++|++.
T Consensus 292 tiv~r~~~ 299 (456)
T 2vdc_G 292 KCLYRRDR 299 (456)
T ss_dssp EEECSSCS
T ss_pred EEEEeCCc
Confidence 99999883
No 77
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=99.82 E-value=4.3e-21 Score=157.10 Aligned_cols=168 Identities=15% Similarity=0.165 Sum_probs=112.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCC--cEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccce
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGH--TVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMG 79 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~--~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (259)
++||+|||||++|+++|..|++.|. +|+|||+.+.+..... .....+.
T Consensus 1 ~k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~---------------------~l~~~~l--------- 50 (404)
T 3fg2_P 1 NDTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRP---------------------PLSKAYL--------- 50 (404)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSG---------------------GGGTGGG---------
T ss_pred CCCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCc---------------------cCCHHHH---------
Confidence 3789999999999999999999998 8999999864321000 0000000
Q ss_pred ecCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEE
Q 024975 80 FQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVV 159 (259)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VI 159 (259)
.... .. ..+.....+...+.+++ ++. ++|+.++... ..+.+.++. .+.||+||
T Consensus 51 --~~~~---------~~------~~~~~~~~~~~~~~~i~--~~~-~~v~~id~~~---~~v~~~~g~----~~~~d~lv 103 (404)
T 3fg2_P 51 --KSGG---------DP------NSLMFRPEKFFQDQAIE--LIS-DRMVSIDREG---RKLLLASGT----AIEYGHLV 103 (404)
T ss_dssp --GSCC---------CT------TSSBSSCHHHHHHTTEE--EEC-CCEEEEETTT---TEEEESSSC----EEECSEEE
T ss_pred --CCCC---------CH------HHccCCCHHHHHhCCCE--EEE-EEEEEEECCC---CEEEECCCC----EEECCEEE
Confidence 0000 00 00001122334456887 777 8999987543 467776654 79999999
Q ss_pred EccCCCCCCccCCCCCCCCCCCceEEccc-----CCCCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 160 VCNGHFSVPRLAQVPGIDSWPGKQMHSHN-----YRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 160 lAtG~~s~~~~~~~~g~~~~~~~~~~~~~-----~~~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
+||| +.|+.|.++|.+. .+ ...... ........+++++|+|+|++|+|+|..+.+.+.+|+++++.+
T Consensus 104 lAtG--~~p~~~~i~g~~~-~~-v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~ 175 (404)
T 3fg2_P 104 LATG--ARNRMLDVPNASL-PD-VLYLRTLDESEVLRQRMPDKKHVVVIGAGFIGLEFAATARAKGLEVDVVELAP 175 (404)
T ss_dssp ECCC--EEECCCCSTTTTS-TT-EECCSSHHHHHHHHHHGGGCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred EeeC--CCccCCCCCCCCC-Cc-EEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCC
Confidence 9999 6788888888652 11 111000 000111246899999999999999999999999999999987
No 78
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=99.82 E-value=1e-20 Score=156.02 Aligned_cols=170 Identities=15% Similarity=0.135 Sum_probs=112.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCC--cEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccce
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGH--TVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMG 79 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~--~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (259)
.+||+|||||++|+++|..|++.|. +|+|+|+.+.+. +. .......+...
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~----~~-----------------~~~l~~~~~~~------- 55 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIP----HH-----------------LPPLSKAYLAG------- 55 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCC----BC-----------------SGGGGTTTTTT-------
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCC----Cc-----------------CCCCcHHHhCC-------
Confidence 5899999999999999999999998 799999975431 00 00000000000
Q ss_pred ecCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEE
Q 024975 80 FQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVV 159 (259)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VI 159 (259)
.... ..+...+.+.+.+.+++ ++.+++|+.++... ..|.+.++. .+.||+||
T Consensus 56 --~~~~-----------------~~~~~~~~~~~~~~gv~--~~~~~~v~~i~~~~---~~v~~~~g~----~~~~d~lv 107 (431)
T 1q1r_A 56 --KATA-----------------ESLYLRTPDAYAAQNIQ--LLGGTQVTAINRDR---QQVILSDGR----ALDYDRLV 107 (431)
T ss_dssp --CSCS-----------------GGGBSSCHHHHHHTTEE--EECSCCEEEEETTT---TEEEETTSC----EEECSEEE
T ss_pred --CCCh-----------------HHhcccCHHHHHhCCCE--EEeCCEEEEEECCC---CEEEECCCC----EEECCEEE
Confidence 0000 01100112333567888 88899999998543 366666554 79999999
Q ss_pred EccCCCCCCccCCCCCCCCCCC-c-eEEcccCC-----CCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 160 VCNGHFSVPRLAQVPGIDSWPG-K-QMHSHNYR-----IPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 160 lAtG~~s~~~~~~~~g~~~~~~-~-~~~~~~~~-----~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
+||| +.|+.|.++|... .+ . ........ ......+++++|||+|++|+|+|..|.+.|.+|++++|.+
T Consensus 108 iAtG--~~p~~~~i~G~~~-~~~~~v~~~~~~~d~~~l~~~l~~~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~ 182 (431)
T 1q1r_A 108 LATG--GRPRPLPVASGAV-GKANNFRYLRTLEDAECIRRQLIADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAA 182 (431)
T ss_dssp ECCC--EEECCCGGGTTHH-HHSTTEEESSSHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred EcCC--CCccCCCCCCccc-CCCceEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCC
Confidence 9999 6788888887642 11 0 11111110 0112246899999999999999999999999999999987
No 79
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.82 E-value=1.9e-20 Score=152.35 Aligned_cols=167 Identities=15% Similarity=0.189 Sum_probs=114.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHcC--CcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccce
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREG--HTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMG 79 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g--~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (259)
++||+|||||++|+++|..|++.| .+|+++|+++ |..+... .+...
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~--g~~~~~~--------------------~l~~~---------- 51 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD--GRSYSKP--------------------MLSTG---------- 51 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC--CCEECGG--------------------GGGGT----------
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC--CCccCcc--------------------cccHH----------
Confidence 489999999999999999999998 4689999874 2222110 00000
Q ss_pred ecCCCCCccCCCCCCCCCCCCCHHHHH-HHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEE
Q 024975 80 FQAYPFVARNYEGSVDLRRYPGHEEVL-RYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAV 158 (259)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~V 158 (259)
++. .....++. .++.+++.+.+++ ++.+++|+.+.... +.|.+.+ ..+.||+|
T Consensus 52 ---~~~-------------~~~~~~~~~~~~~~~~~~~~v~--~~~~~~v~~i~~~~---~~v~~~~-----~~~~~d~l 105 (384)
T 2v3a_A 52 ---FSK-------------NKDADGLAMAEPGAMAEQLNAR--ILTHTRVTGIDPGH---QRIWIGE-----EEVRYRDL 105 (384)
T ss_dssp ---TTT-------------TCCHHHHEEECHHHHHHHTTCE--EECSCCCCEEEGGG---TEEEETT-----EEEECSEE
T ss_pred ---HhC-------------CCCHHHhhccCHHHHHHhCCcE--EEeCCEEEEEECCC---CEEEECC-----cEEECCEE
Confidence 000 00113332 2445566677888 88888898887543 4555542 36999999
Q ss_pred EEccCCCCCCccCCCCCCCCCCCceEEcccCCCC-----CCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 159 VVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIP-----NPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 159 IlAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~-----~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
|+||| +.|..|+++|... ........+... ....+++++|+|+|++|+|+|..|.+.+.+|++++|.+
T Consensus 106 viAtG--~~p~~p~i~g~~~--~~v~~~~~~~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 178 (384)
T 2v3a_A 106 VLAWG--AEPIRVPVEGDAQ--DALYPINDLEDYARFRQAAAGKRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCE 178 (384)
T ss_dssp EECCC--EEECCCCCBSTTT--TCEEECSSHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred EEeCC--CCcCCCCCCCcCc--CCEEEECCHHHHHHHHHhhccCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCc
Confidence 99999 7888888887642 122222211110 01236899999999999999999999999999999987
No 80
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.81 E-value=2.3e-20 Score=162.89 Aligned_cols=167 Identities=19% Similarity=0.167 Sum_probs=110.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
.+||+||||||+|+++|..|+++|++|+|||+.+.+||.+.+...
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~~~~----------------------------------- 433 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQVAA----------------------------------- 433 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHHHTT-----------------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeeeccc-----------------------------------
Confidence 479999999999999999999999999999999989888765210
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEc
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlA 161 (259)
.|. ++....+..++...++.... ....++.+.. + ..+.++++. .+.+|+||+|
T Consensus 434 -~pg-------------~~~~~~~~~~~~~~i~~~~~-----~~~~~v~i~~---~-~~v~~~~~~----~~~~d~vviA 486 (729)
T 1o94_A 434 -LPG-------------LGEWSYHRDYRETQITKLLK-----KNKESQLALG---Q-KPMTADDVL----QYGADKVIIA 486 (729)
T ss_dssp -STT-------------CGGGHHHHHHHHHHHHHHHH-----HSTTCEEECS---C-CCCCHHHHH----TSCCSEEEEC
T ss_pred -CCC-------------hHHHHHHHHHHHHHHHHhhc-----ccCCceEEEe---C-eEEehhhcc----ccCCCEEEEc
Confidence 000 00003444455444433200 0001111110 0 112222221 4789999999
Q ss_pred cCCCCC------CccCCCCCCCCCCCceEEcccCCCCCCCCCCeEEEEc--cCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 162 NGHFSV------PRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIG--HYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 162 tG~~s~------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG--~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
||.... |..|.++|.+.+.....+...+.......+++|+||| +|.+|+|+|..|.+.+.+|++++|.+
T Consensus 487 tG~~~~~~~~~~p~~~~ipG~~~~~~~v~~~~~~l~~~~~~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 487 TGARWNTDGTNCLTHDPIPGADASLPDQLTPEQVMDGKKKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp CCEEECSSCCCTTTSSCCTTCCTTSTTEECHHHHHHCCSCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCcccccccCccCCCCCCccccCCCEEEHHHHhcCCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 995311 5667788877544444544444434445678999999 99999999999999999999999987
No 81
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.81 E-value=8.8e-21 Score=164.81 Aligned_cols=159 Identities=22% Similarity=0.246 Sum_probs=116.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
.+||+|||||++|+++|..|+++|++|+|||+++.+||.+.....
T Consensus 391 ~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~~~~----------------------------------- 435 (690)
T 3k30_A 391 DARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQESA----------------------------------- 435 (690)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHHHHT-----------------------------------
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeeeccC-----------------------------------
Confidence 479999999999999999999999999999999988888754100
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHh-CCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEE
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREF-GVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVV 160 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIl 160 (259)
.+. +....++..++...+.+. +++ ++.+++|+. .+. ..+.+|+||+
T Consensus 436 -~p~-------------~~~~~~~~~~~~~~~~~~~gv~--~~~~~~v~~-------------~~~----~~~~~d~lvl 482 (690)
T 3k30_A 436 -LPG-------------LSAWGRVKEYREAVLAELPNVE--IYRESPMTG-------------DDI----VEFGFEHVIT 482 (690)
T ss_dssp -STT-------------CGGGGHHHHHHHHHHHTCTTEE--EESSCCCCH-------------HHH----HHTTCCEEEE
T ss_pred -CCc-------------hhHHHHHHHHHHHHHHHcCCCE--EEECCeecH-------------HHH----hhcCCCEEEE
Confidence 000 001166778888888776 777 766654321 111 2477999999
Q ss_pred ccCCCCC------CccCCCCCCCCCCCceEEcccCCCCCCCCCCeEEEEc--cCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 161 CNGHFSV------PRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIG--HYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 161 AtG~~s~------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG--~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
|||.... +..|.++|... ....+...+.......+++|+||| +|++|+|+|..|.+.+.+|+++++.+
T Consensus 483 AtG~~~~~~~~~~~~~~~i~G~~~--~~v~~~~~~l~~~~~~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~ 558 (690)
T 3k30_A 483 ATGATWRTDGVARFHTTALPIAEG--MQVLGPDDLFAGRLPDGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGA 558 (690)
T ss_dssp CCCEEECSSCCSSSCSSCCCBCTT--SEEECHHHHHTTCCCSSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSS
T ss_pred cCCCccccccccccCCCCCCCCCC--CcEEcHHHHhCCCCCCCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccc
Confidence 9994321 45677777653 234444444444455678999999 99999999999999999999999987
No 82
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.81 E-value=2.7e-20 Score=154.27 Aligned_cols=160 Identities=24% Similarity=0.343 Sum_probs=112.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHcC--CcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccce
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREG--HTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMG 79 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g--~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (259)
++||+|||+||+|+.+|..|.+.+ .+|+|||+.+.++|.|.+. +.
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~~g---------~~------------------------ 52 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFG---------VA------------------------ 52 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHHHT---------SC------------------------
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceeecc---------cC------------------------
Confidence 579999999999999999999998 9999999998887766541 00
Q ss_pred ecCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEE
Q 024975 80 FQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVV 159 (259)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VI 159 (259)
| .++...++..++.+.+.+.+++ ++.++.|. .. |.+.+ ..+.||+||
T Consensus 53 ----p-------------~~~~~~~~~~~~~~~~~~~gv~--~~~~~~v~-------~~--V~~~~-----~~~~~d~lV 99 (460)
T 1cjc_A 53 ----P-------------DHPEVKNVINTFTQTARSDRCA--FYGNVEVG-------RD--VTVQE-----LQDAYHAVV 99 (460)
T ss_dssp ----T-------------TCGGGGGHHHHHHHHHTSTTEE--EEBSCCBT-------TT--BCHHH-----HHHHSSEEE
T ss_pred ----C-------------CCccHHHHHHHHHHHHHhCCcE--EEeeeEEe-------eE--EEecc-----ceEEcCEEE
Confidence 0 0111155667777777777887 77776551 11 22222 136899999
Q ss_pred EccCCCCCC-ccCCCCCCCCCCCceEEcccC----------CCC-CCCCCCeEEEEccCcCHHHHHHHHh----------
Q 024975 160 VCNGHFSVP-RLAQVPGIDSWPGKQMHSHNY----------RIP-NPFQDQVVILIGHYASGLDIKRDLA---------- 217 (259)
Q Consensus 160 lAtG~~s~~-~~~~~~g~~~~~~~~~~~~~~----------~~~-~~~~~~~v~viG~G~~a~e~a~~l~---------- 217 (259)
+||| +.+ +.|.+||.+. .+ ......+ ... ....+++++|||+|++|+|+|..|.
T Consensus 100 lAtG--s~~~~~~~ipG~~~-~g-v~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~td 175 (460)
T 1cjc_A 100 LSYG--AEDHQALDIPGEEL-PG-VFSARAFVGWYNGLPENRELAPDLSCDTAVILGQGNVALDVARILLTPPDHLEKTD 175 (460)
T ss_dssp ECCC--CCEECCCCCTTTTS-TT-EEEHHHHHHHHTTCGGGTTCCCCTTSSEEEEESCSHHHHHHHHHHHSCGGGGTTSC
T ss_pred EecC--cCCCCCCCCCCCCC-Cc-EEEHHHHHHHhhcCccccccccCCCCCEEEEECCCHHHHHHHHHHhhchhhhcccc
Confidence 9999 554 6788888752 22 2222222 111 1235799999999999999999998
Q ss_pred ----------cccC-eEEEEecCCC
Q 024975 218 ----------GFAK-EVHIASRSVA 231 (259)
Q Consensus 218 ----------~~~~-~v~~~~r~~~ 231 (259)
+.+. +|+++.|++.
T Consensus 176 i~~~a~~~l~~~g~~~V~lv~r~~~ 200 (460)
T 1cjc_A 176 ITEAALGALRQSRVKTVWIVGRRGP 200 (460)
T ss_dssp CCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred ccHHHHHHHhhCCCcEEEEEEcCCh
Confidence 4565 7999999883
No 83
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.80 E-value=1.8e-19 Score=161.29 Aligned_cols=200 Identities=17% Similarity=0.159 Sum_probs=129.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
.+||+||||||+|+++|..|.+.|.+|+|||+++.+||.|.. . . +. . +
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~~-~--~---------k~-----~--------------i- 175 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLLD-T--A---------GE-----Q--------------I- 175 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGGG-S--S---------CC-----E--------------E-
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceecc-C--C---------cc-----c--------------c-
Confidence 378999999999999999999999999999999889888762 0 0 00 0 0
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHh-CCceeEEeceeEEEEEEeC--------CCcEEEEEEe--cCCce
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREF-GVDQVVRLHTEVLNARLVE--------SNKWKVKSRK--KDDVV 150 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~v~~~~~v~~i~~~~--------~~~~~v~~~~--g~~~~ 150 (259)
+. + ...++...+.+.+.+. +++ ++.+++|.++.... .+.+.+...+ ..+..
T Consensus 176 --~~-------------~-~~~~~~~~~~~~l~~~~~v~--~~~~~~V~~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~ 237 (965)
T 2gag_A 176 --DG-------------M-DSSAWIEQVTSELAEAEETT--HLQRTTVFGSYDANYLIAAQRRTVHLDGPSGPGVSRERI 237 (965)
T ss_dssp --TT-------------E-EHHHHHHHHHHHHHHSTTEE--EESSEEEEEEETTTEEEEEEECSTTCSSCCCTTCCSEEE
T ss_pred --CC-------------C-CHHHHHHHHHHHHhhcCCcE--EEeCCEEEeeecCCceeeeEeecccccccccccCCCCce
Confidence 00 0 0134444555555554 777 88888888876321 0111111100 00112
Q ss_pred EEEEeCEEEEccCCCCCCccCCCCCCCCCCCceEEcc---cCCC-CCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEE
Q 024975 151 EEETFDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSH---NYRI-PNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIA 226 (259)
Q Consensus 151 ~~~~ad~VIlAtG~~s~~~~~~~~g~~~~~~~~~~~~---~~~~-~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~ 226 (259)
..+.||+||+||| +.++.|.+||.+. .+ .+... .+.. ....++++++|||+|++|+|+|..|.+.|.+|+++
T Consensus 238 ~~i~~d~lVlATG--s~p~~~~ipG~~~-~g-v~~~~~~~~~l~~~~~~~gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv 313 (965)
T 2gag_A 238 WHIRAKQVVLATG--AHERPIVFENNDR-PG-IMLAGAVRSYLNRYGVRAGARIAVATTNDSAYELVRELAATGGVVAVI 313 (965)
T ss_dssp EEEEEEEEEECCC--EEECCCCCBTCCS-TT-EEEHHHHHHHHHTTCEESCSSEEEEESSTTHHHHHHHHGGGTCCSEEE
T ss_pred EEEECCEEEECCC--CccCCCCCCCCCC-CC-EEEhHHHHHHHHhcCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEE
Confidence 3689999999999 6788888888653 23 22221 1111 12335689999999999999999999999999999
Q ss_pred ecCCCccc-ccCC-CCCCCceEeeeeeEEee
Q 024975 227 SRSVADET-HEKQ-PGYDNMWLHSMVRTKKC 255 (259)
Q Consensus 227 ~r~~~~~~-~~~~-~~~~~~~~~~~v~~~~~ 255 (259)
++++...- .+.+ .....++.++.|+++++
T Consensus 314 ~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~ 344 (965)
T 2gag_A 314 DARSSISAAAAQAVADGVQVISGSVVVDTEA 344 (965)
T ss_dssp ESCSSCCHHHHHHHHTTCCEEETEEEEEEEE
T ss_pred ECCCccchhHHHHHhCCeEEEeCCEeEEEec
Confidence 99883210 2222 12245555677777765
No 84
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.80 E-value=2e-19 Score=155.88 Aligned_cols=145 Identities=26% Similarity=0.422 Sum_probs=107.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
++||+|||||++|+++|..|+++|++|+|+|+.+.+||.+.....
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~~----------------------------------- 417 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQ----------------------------------- 417 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHTT-----------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeecccc-----------------------------------
Confidence 479999999999999999999999999999999888877653100
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEE-EeCEEEE
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEE-TFDAVVV 160 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~-~ad~VIl 160 (259)
.+.. ....++..++.+.+.+.+++ ++.++.|+. . .+ .||+||+
T Consensus 418 -~~~~-------------~~~~~~~~~~~~~~~~~gv~--~~~~~~v~~------~--------------~~~~~d~lvi 461 (671)
T 1ps9_A 418 -IPGK-------------EEFYETLRYYRRMIEVTGVT--LKLNHTVTA------D--------------QLQAFDETIL 461 (671)
T ss_dssp -STTC-------------TTHHHHHHHHHHHHHHHTCE--EEESCCCCS------S--------------SSCCSSEEEE
T ss_pred -CCCH-------------HHHHHHHHHHHHHHHHcCCE--EEeCcEecH------H--------------HhhcCCEEEE
Confidence 0000 00144556677777788988 887765431 0 13 7999999
Q ss_pred ccCCCCCCccCCCCCCCCCCCceEEcccCCCCCCCCCCeEEEEccCcCHHHHHHHHhcccC
Q 024975 161 CNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAK 221 (259)
Q Consensus 161 AtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~ 221 (259)
||| +.|+.|.++|.+. ........+.......+++|+|||+|++|+|+|..|.+.|.
T Consensus 462 AtG--~~p~~~~i~G~~~--~~v~~~~~~l~~~~~~~~~VvVIGgG~~g~E~A~~l~~~G~ 518 (671)
T 1ps9_A 462 ASG--IVPRTPPIDGIDH--PKVLSYLDVLRDKAPVGNKVAIIGCGGIGFDTAMYLSQPGE 518 (671)
T ss_dssp CCC--EEECCCCCBTTTS--TTEEEHHHHHTSCCCCCSEEEEECCHHHHHHHHHHHTCCSS
T ss_pred ccC--CCcCCCCCCCCCC--CcEeeHHHHhhCCCCCCCeEEEECCChhHHHHHHHHHhcCC
Confidence 999 6888888888764 23344444433444567999999999999999999987763
No 85
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.77 E-value=5.5e-20 Score=152.00 Aligned_cols=168 Identities=15% Similarity=0.279 Sum_probs=110.2
Q ss_pred CCeEEEECCChHHHHHHHHHHH---cCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccc
Q 024975 2 FRHVAVIGAGAAGLVVGHELLR---EGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELM 78 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~---~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (259)
|+||+|||||++|+++|..|++ .+.+|+|+|+++.. .+. . ..
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~----~~~-----------------~--~~------------ 48 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYF----QFV-----------------P--SN------------ 48 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEE----ECG-----------------G--GH------------
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCC----ccc-----------------C--Cc------------
Confidence 5899999999999999999999 79999999997632 100 0 00
Q ss_pred eecCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEE
Q 024975 79 GFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAV 158 (259)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~V 158 (259)
++.. .......++...+.+.+.+.+++ ++ ..+|+.++... ..|.++++. .+.||+|
T Consensus 49 -----~~~~---------~g~~~~~~~~~~l~~~~~~~gv~--~~-~~~v~~id~~~---~~V~~~~g~----~i~~d~l 104 (437)
T 3sx6_A 49 -----PWVG---------VGWKERDDIAFPIRHYVERKGIH--FI-AQSAEQIDAEA---QNITLADGN----TVHYDYL 104 (437)
T ss_dssp -----HHHH---------HTSSCHHHHEEECHHHHHTTTCE--EE-CSCEEEEETTT---TEEEETTSC----EEECSEE
T ss_pred -----cccc---------cCccCHHHHHHHHHHHHHHCCCE--EE-EeEEEEEEcCC---CEEEECCCC----EEECCEE
Confidence 0000 00011144555566677777888 65 56899887543 266666654 7999999
Q ss_pred EEccCCCCCCccCCCCCCCCCCCceEEcccCCCCCC--------CCCCeEEEEccCcCH------HHHHH----HHhccc
Q 024975 159 VVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNP--------FQDQVVILIGHYASG------LDIKR----DLAGFA 220 (259)
Q Consensus 159 IlAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~--------~~~~~v~viG~G~~a------~e~a~----~l~~~~ 220 (259)
|+||| +.++.|.+||.....+.......+..... ..+++++|||+|.++ +|+|. .+.+.+
T Consensus 105 viAtG--~~~~~~~ipG~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~g 182 (437)
T 3sx6_A 105 MIATG--PKLAFENVPGSDPHEGPVQSICTVDHAERAFAEYQALLREPGPIVIGAMAGASCFGPAYEYAMIVASDLKKRG 182 (437)
T ss_dssp EECCC--CEECGGGSTTCSTTTSSEECCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTT
T ss_pred EECCC--CCcCcccCCCCCcccCcceecccccHHHHHHHHHHHHHhCCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHcC
Confidence 99999 78888889998764333322221111100 113457899997665 88874 445555
Q ss_pred Ce-----EEEEecCC
Q 024975 221 KE-----VHIASRSV 230 (259)
Q Consensus 221 ~~-----v~~~~r~~ 230 (259)
.+ |+++++.+
T Consensus 183 ~~~~~~~Vtlv~~~~ 197 (437)
T 3sx6_A 183 MRDKIPSFTFITSEP 197 (437)
T ss_dssp CGGGCSCEEEEESSS
T ss_pred CcccCcEEEEEcCCc
Confidence 43 99999987
No 86
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.75 E-value=3.3e-19 Score=160.63 Aligned_cols=162 Identities=22% Similarity=0.362 Sum_probs=109.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCC-cEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceecccccccee
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGH-TVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGF 80 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~-~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (259)
.+||+||||||+|+++|..|++.|+ +|+|||+.+.+||.+.+. .
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~~~---------i-------------------------- 231 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSE---------I-------------------------- 231 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHHHT---------S--------------------------
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCcccccc---------C--------------------------
Confidence 3689999999999999999999999 799999998888876431 0
Q ss_pred cCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEE
Q 024975 81 QAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVV 160 (259)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIl 160 (259)
..+. .+ .++..+..+.+.+.+++ ++.++.+.. +. +.++++. .+.||+||+
T Consensus 232 p~~~--------------~~--~~~~~~~~~~~~~~gv~--~~~~~~v~~------~~--v~~~~~~----~~~~d~vvl 281 (1025)
T 1gte_A 232 PQFR--------------LP--YDVVNFEIELMKDLGVK--IICGKSLSE------NE--ITLNTLK----EEGYKAAFI 281 (1025)
T ss_dssp CTTT--------------SC--HHHHHHHHHHHHTTTCE--EEESCCBST------TS--BCHHHHH----HTTCCEEEE
T ss_pred Cccc--------------CC--HHHHHHHHHHHHHCCcE--EEcccEecc------ce--EEhhhcC----ccCCCEEEE
Confidence 0000 01 44555666777778888 888766521 11 2222221 367999999
Q ss_pred ccCCCCCCccCCC-CCCCCCCCceEEcccC--------------CC-CCCCCCCeEEEEccCcCHHHHHHHHhcccC-eE
Q 024975 161 CNGHFSVPRLAQV-PGIDSWPGKQMHSHNY--------------RI-PNPFQDQVVILIGHYASGLDIKRDLAGFAK-EV 223 (259)
Q Consensus 161 AtG~~s~~~~~~~-~g~~~~~~~~~~~~~~--------------~~-~~~~~~~~v~viG~G~~a~e~a~~l~~~~~-~v 223 (259)
|||. ..|+.+.+ +|.....+ ......+ .. .....+++|+|||+|.+|+|+|..+.+.|. +|
T Consensus 282 AtGa-~~p~~l~~~~G~~~~~g-v~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~VvVIGgG~~g~e~A~~~~~~G~~~V 359 (1025)
T 1gte_A 282 GIGL-PEPKTDDIFQGLTQDQG-FYTSKDFLPLVAKSSKAGMCACHSPLPSIRGAVIVLGAGDTAFDCATSALRCGARRV 359 (1025)
T ss_dssp CCCC-CEECCCGGGTTCCTTTT-EEEHHHHHHHHHHHHCBTTBSCCCCCCCCCSEEEEECSSHHHHHHHHHHHHTTCSEE
T ss_pred ecCC-CCCCCCCCCCCCCCCCC-EEEhHHHHHHHHhhcccccccccccccccCCcEEEECCChHHHHHHHHHHHcCCCEE
Confidence 9994 14654443 45442222 2222111 11 112235699999999999999999999985 89
Q ss_pred EEEecCC
Q 024975 224 HIASRSV 230 (259)
Q Consensus 224 ~~~~r~~ 230 (259)
|+++|++
T Consensus 360 tvv~r~~ 366 (1025)
T 1gte_A 360 FLVFRKG 366 (1025)
T ss_dssp EEECSSC
T ss_pred EEEEecC
Confidence 9999987
No 87
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.75 E-value=4e-19 Score=144.84 Aligned_cols=154 Identities=19% Similarity=0.381 Sum_probs=92.4
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCC--CCCCCCCCccc-c-ccccceeccccccc
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPL--GVDPNRYPVHS-S-LYKSLRVNLPRELM 78 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~--~~~~~~~~~~~-~-~~~~~~~~~~~~~~ 78 (259)
+||+|||||++|+++|..|+++|.+|+|+|+++.+|+.+.......+... .+.+...+... . ....+......+..
T Consensus 5 ~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 84 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWDFI 84 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHHHH
T ss_pred CCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHHHH
Confidence 79999999999999999999999999999999888654432211111000 01110000000 0 00000000000000
Q ss_pred ee---cCCCCCccCCCCCCCCCCCC--CHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEe----CCCcEEEEEEecCCc
Q 024975 79 GF---QAYPFVARNYEGSVDLRRYP--GHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLV----ESNKWKVKSRKKDDV 149 (259)
Q Consensus 79 ~~---~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~----~~~~~~v~~~~g~~~ 149 (259)
.+ ...++... .+...|| ....+..++.+.+.+.+++ ++++++|+++... + +.|.|.+.++
T Consensus 85 ~~~~~~Gi~~~~~-----~~g~~~p~~~~~~l~~~L~~~~~~~Gv~--i~~~~~v~~i~~~~~g~~-~~~~v~~~~g--- 153 (401)
T 2gqf_A 85 SLVAEQGITYHEK-----ELGQLFCDEGAEQIVEMLKSECDKYGAK--ILLRSEVSQVERIQNDEK-VRFVLQVNST--- 153 (401)
T ss_dssp HHHHHTTCCEEEC-----STTEEEETTCTHHHHHHHHHHHHHHTCE--EECSCCEEEEEECCSCSS-CCEEEEETTE---
T ss_pred HHHHhCCCceEEC-----cCCEEccCCCHHHHHHHHHHHHHHCCCE--EEeCCEEEEEEcccCcCC-CeEEEEECCC---
Confidence 00 00111100 1122333 4588889999999899999 9999999999876 4 5577766432
Q ss_pred eEEEEeCEEEEccCCCCCCc
Q 024975 150 VEEETFDAVVVCNGHFSVPR 169 (259)
Q Consensus 150 ~~~~~ad~VIlAtG~~s~~~ 169 (259)
.+++|.||+|||.++.|.
T Consensus 154 --~i~ad~VVlAtG~~s~p~ 171 (401)
T 2gqf_A 154 --QWQCKNLIVATGGLSMPG 171 (401)
T ss_dssp --EEEESEEEECCCCSSCGG
T ss_pred --EEECCEEEECCCCccCCC
Confidence 689999999999877553
No 88
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.73 E-value=1.1e-18 Score=143.10 Aligned_cols=195 Identities=18% Similarity=0.097 Sum_probs=118.4
Q ss_pred CCeEEEECCChHHHHHHHHHHH---cCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccc
Q 024975 2 FRHVAVIGAGAAGLVVGHELLR---EGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELM 78 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~---~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (259)
|+||+|||||++|+++|..|++ .|.+|+|+|+++.++....
T Consensus 1 m~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~------------------------------------ 44 (409)
T 3h8l_A 1 MTKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPA------------------------------------ 44 (409)
T ss_dssp -CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCS------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccc------------------------------------
Confidence 5799999999999999999999 8999999999874321100
Q ss_pred eecCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEE
Q 024975 79 GFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAV 158 (259)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~V 158 (259)
.++... ......++...+.+.+.+.+++ ++.+ +|+.++... ..|.+.++.+....+.||+|
T Consensus 45 ----~~~~~~---------~~~~~~~~~~~~~~~~~~~gv~--~~~~-~v~~i~~~~---~~V~~~~g~~~~~~~~~d~l 105 (409)
T 3h8l_A 45 ----LPHVAI---------GVRDVDELKVDLSEALPEKGIQ--FQEG-TVEKIDAKS---SMVYYTKPDGSMAEEEYDYV 105 (409)
T ss_dssp ----SCCCCS---------SCCCCCCEEEEHHHHTGGGTCE--EEEC-EEEEEETTT---TEEEEECTTSCEEEEECSEE
T ss_pred ----hhhccc---------CCcCHHHHHHHHHHHHhhCCeE--EEEe-eEEEEeCCC---CEEEEccCCcccceeeCCEE
Confidence 000000 0000022223445555667888 7666 888887543 35777776655566999999
Q ss_pred EEccCCCCCCccCCCCCCCCCCCceEEcccCCCCCCC------CCCeEEEEccCc-------------------------
Q 024975 159 VVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPF------QDQVVILIGHYA------------------------- 207 (259)
Q Consensus 159 IlAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~------~~~~v~viG~G~------------------------- 207 (259)
|+||| +.++.|.++|... ...+...+...... ..++++|||+|+
T Consensus 106 ViAtG--~~~~~~~ipG~~~---~~~~~~~~~~~~~~~~~l~~~~~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~ 180 (409)
T 3h8l_A 106 IVGIG--AHLATELVKGWDK---YGYSVCEPEFATKLREKLESFQGGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEG 180 (409)
T ss_dssp EECCC--CEECGGGSBTHHH---HCEESSSTTHHHHHHHHHHHCCSEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCH
T ss_pred EECCC--CCcCccCCCChhh---cCcCcCCHHHHHHHHHHHHHhcCCeEEEEecccccCCCccccccccccCCCCcccCC
Confidence 99999 6788888887653 11122111111000 125677999992
Q ss_pred CHHHHHHH----Hhccc----CeEEEEecCC-----CcccccCC---CCCCCceE--eeeeeEEeec
Q 024975 208 SGLDIKRD----LAGFA----KEVHIASRSV-----ADETHEKQ---PGYDNMWL--HSMVRTKKCS 256 (259)
Q Consensus 208 ~a~e~a~~----l~~~~----~~v~~~~r~~-----~~~~~~~~---~~~~~~~~--~~~v~~~~~~ 256 (259)
.++|++.. +.+.+ .+|+++++.+ ++++.+.+ ++..++.+ ++.|++++..
T Consensus 181 ~~~e~a~~~~~~l~~~g~~~~~~v~~~~~~~~l~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~ 247 (409)
T 3h8l_A 181 PVFEMSLMLHGYFKKKGMLDKVHVTVFSPGEYLSDLSPNSRKAVASIYNQLGIKLVHNFKIKEIREH 247 (409)
T ss_dssp HHHHHHHHHHHHHHTTTCTTTEEEEEECSSSSSTTBCHHHHHHHHHHHHHHTCEEECSCCEEEECSS
T ss_pred HHHHHHHHHHHHHHHcCCCCCeEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEEcCCceEEECCC
Confidence 26777754 44556 3899999976 11222211 22234554 4667777653
No 89
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=99.72 E-value=1.2e-19 Score=151.91 Aligned_cols=194 Identities=13% Similarity=0.113 Sum_probs=107.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHc--CCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccce
Q 024975 2 FRHVAVIGAGAAGLVVGHELLRE--GHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMG 79 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~--g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (259)
.+||+|||||++|+++|..|++. +.+|+|||+.+.++-... ...+.++...... . .....
T Consensus 11 ~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r~------------~lsk~l~~~~~~~-~-----~~~~~ 72 (493)
T 1m6i_A 11 HVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRP------------PLSKELWFSDDPN-V-----TKTLR 72 (493)
T ss_dssp EEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCSG------------GGGTGGGCC--CT-H-----HHHCE
T ss_pred cCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCC------------CCCHHhhcCCccc-h-----hhccc
Confidence 37899999999999999999887 889999999875531100 0000000000000 0 00001
Q ss_pred ecCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEE
Q 024975 80 FQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVV 159 (259)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VI 159 (259)
+..++....... ......|.....+.+ ..+.+++ ++.+++|++++... ++|.+.++. .+.||+||
T Consensus 73 ~~~~~~~~~~~~-~~~~~~~~~~~~l~~-----~~~~gv~--~~~g~~v~~id~~~---~~V~~~~g~----~i~yd~lv 137 (493)
T 1m6i_A 73 FKQWNGKERSIY-FQPPSFYVSAQDLPH-----IENGGVA--VLTGKKVVQLDVRD---NMVKLNDGS----QITYEKCL 137 (493)
T ss_dssp EECTTSCEEESB-SSCGGGSBCTTTTTT-----STTCEEE--EEETCCEEEEEGGG---TEEEETTSC----EEEEEEEE
T ss_pred cccccccccccc-ccchHhhcchhhhhh-----hhcCCeE--EEcCCEEEEEECCC---CEEEECCCC----EEECCEEE
Confidence 111110000000 000000111011100 1234666 88888999988643 467776654 79999999
Q ss_pred EccCCCCCCccCCCCCCCC--CCCceEEcccCCC-----CCCCCCCeEEEEccCcCHHHHHHHHhc----ccCeEEEEec
Q 024975 160 VCNGHFSVPRLAQVPGIDS--WPGKQMHSHNYRI-----PNPFQDQVVILIGHYASGLDIKRDLAG----FAKEVHIASR 228 (259)
Q Consensus 160 lAtG~~s~~~~~~~~g~~~--~~~~~~~~~~~~~-----~~~~~~~~v~viG~G~~a~e~a~~l~~----~~~~v~~~~r 228 (259)
+||| +.|+.|.+++... +............ .....+++++|||+|++|+|+|..|.+ .+.+|+++.+
T Consensus 138 iATG--s~p~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~ 215 (493)
T 1m6i_A 138 IATG--GTPRSLSAIDRAGAEVKSRTTLFRKIGDFRSLEKISREVKSITIIGGGFLGSELACALGRKARALGTEVIQLFP 215 (493)
T ss_dssp ECCC--EEECCCHHHHTSCHHHHHTEEECCSHHHHHHHHHHHHHCSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECS
T ss_pred ECCC--CCCCCCCCcccccccccCceEEEcCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEec
Confidence 9999 6776655443210 0001111100000 001136899999999999999999976 3678999988
Q ss_pred CC
Q 024975 229 SV 230 (259)
Q Consensus 229 ~~ 230 (259)
.+
T Consensus 216 ~~ 217 (493)
T 1m6i_A 216 EK 217 (493)
T ss_dssp SS
T ss_pred Cc
Confidence 75
No 90
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=99.70 E-value=1.8e-18 Score=144.82 Aligned_cols=199 Identities=14% Similarity=0.219 Sum_probs=114.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
+++|||||||++|+++|..|.+.+.+|+|+|+++.. .+. .+........
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~----~~~-----------------------PlL~~va~G~---- 90 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYF----LFT-----------------------PLLPSAPVGT---- 90 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEE----ECG-----------------------GGGGGTTTTS----
T ss_pred CCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCc----ccc-----------------------cchhHHhhcc----
Confidence 368999999999999999999999999999997531 110 0000000000
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHH--HhCCceeEEeceeEEEEEEeCCCcEEEEEEec-------------
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAR--EFGVDQVVRLHTEVLNARLVESNKWKVKSRKK------------- 146 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g------------- 146 (259)
.. + .++..-+..... +.+++ ....+|++|+... +...+....+
T Consensus 91 -l~---------------~--~~i~~p~~~~~~~~~~~v~---~~~~~v~~ID~~~-k~V~l~~~~~~~~~~~~~~~~~~ 148 (502)
T 4g6h_A 91 -VD---------------E--KSIIEPIVNFALKKKGNVT---YYEAEATSINPDR-NTVTIKSLSAVSQLYQPENHLGL 148 (502)
T ss_dssp -SC---------------G--GGGEEEHHHHHTTCSSCEE---EEEEEEEEEEGGG-TEEEEEEEEEEEECSSSCCCCCC
T ss_pred -cc---------------H--HHhhhhHHHHHHhhcCCeE---EEEEEEEEEEhhh-CEEEEeecccceeeccccccccc
Confidence 00 0 111111122221 12343 3456888888765 4444433211
Q ss_pred -CCceEEEEeCEEEEccCCCCCCccCCCCCCCCCCCceEEcc----c--------CC----CCCC----CCCCeEEEEcc
Q 024975 147 -DDVVEEETFDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSH----N--------YR----IPNP----FQDQVVILIGH 205 (259)
Q Consensus 147 -~~~~~~~~ad~VIlAtG~~s~~~~~~~~g~~~~~~~~~~~~----~--------~~----~~~~----~~~~~v~viG~ 205 (259)
......+.||++|+||| +.++.+.+||..++.- .+.+. . +. .... ....+++|||+
T Consensus 149 ~~~~~~~i~YD~LViAtG--s~~~~~~ipG~~e~a~-~l~t~~dA~~ir~~l~~~~e~a~~~~~~~~~~~~~~~vvVvGg 225 (502)
T 4g6h_A 149 HQAEPAEIKYDYLISAVG--AEPNTFGIPGVTDYGH-FLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGG 225 (502)
T ss_dssp CTTCCEEEECSEEEECCC--CEECCTTCTTHHHHCE-ECSSHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHTEEEEECC
T ss_pred ccCCceEEeCCEEEEcCC--cccccCCccCcccccC-CCCCHHHHHHHHHHHHHHHHHHhcccccchhhccccceEEECC
Confidence 12235799999999999 8899999998654210 00000 0 00 0000 01247999999
Q ss_pred CcCHHHHHHHHhccc--------------CeEEEEecCC------Cccccc---CCCCCCCceE--eeeeeEEeec
Q 024975 206 YASGLDIKRDLAGFA--------------KEVHIASRSV------ADETHE---KQPGYDNMWL--HSMVRTKKCS 256 (259)
Q Consensus 206 G~~a~e~a~~l~~~~--------------~~v~~~~r~~------~~~~~~---~~~~~~~~~~--~~~v~~~~~~ 256 (259)
|++|+|+|.+|.+.. .+|+++++.+ ++++.+ +.+++.+|++ ++.|++++..
T Consensus 226 G~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~v~~v~~~ 301 (502)
T 4g6h_A 226 GPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMFEKKLSSYAQSHLENTSIKVHLRTAVAKVEEK 301 (502)
T ss_dssp SHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEETTEEEEEECSS
T ss_pred CcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccccCCCHHHHHHHHHHHHhcceeeecCceEEEEeCC
Confidence 999999999987542 5799999988 222222 2223334444 5777776643
No 91
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.68 E-value=9.5e-17 Score=134.41 Aligned_cols=160 Identities=20% Similarity=0.200 Sum_probs=106.6
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceecC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQA 82 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (259)
+||+|||||++|+++|.+|++. .+|+|||+++.+||.+..... .+..
T Consensus 109 ~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~--------------------------------~~~g 155 (493)
T 1y56_A 109 VDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGI--------------------------------KQEG 155 (493)
T ss_dssp ESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCS--------------------------------EETT
T ss_pred CCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeecccc--------------------------------ccCC
Confidence 6899999999999999999999 999999999988877654100 0000
Q ss_pred CCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEcc
Q 024975 83 YPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVCN 162 (259)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlAt 162 (259)
++. ...++...+.+.+ +.+++ ++++++|.++.... +.+.+...+ ++....+.+|++|+||
T Consensus 156 ~~~---------------~~~~~~~~l~~~l-~~~v~--~~~~~~v~~i~~~~-~~~~~~~~~-~~~~~~~~~d~lvlAt 215 (493)
T 1y56_A 156 FNK---------------DSRKVVEELVGKL-NENTK--IYLETSALGVFDKG-EYFLVPVVR-GDKLIEILAKRVVLAT 215 (493)
T ss_dssp TTE---------------EHHHHHHHHHHTC-CTTEE--EETTEEECCCEECS-SSEEEEEEE-TTEEEEEEESCEEECC
T ss_pred CCC---------------CHHHHHHHHHHHH-hcCCE--EEcCCEEEEEEcCC-cEEEEEEec-CCeEEEEECCEEEECC
Confidence 000 1144444443333 45676 88899999988765 556655433 2233468999999999
Q ss_pred CCCCCCccCCCCCCCCCCCceEEcccCC----CCCCCCCCeEEEEccCcCHHHHHHHHhcccC
Q 024975 163 GHFSVPRLAQVPGIDSWPGKQMHSHNYR----IPNPFQDQVVILIGHYASGLDIKRDLAGFAK 221 (259)
Q Consensus 163 G~~s~~~~~~~~g~~~~~~~~~~~~~~~----~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~ 221 (259)
| +.++.|.++|.+. .+ .+....+. .....++++++|+|+|++++| ..+.+.|.
T Consensus 216 G--a~~~~~~~~g~~~-~g-v~~~~~~~~~~~~~~~~~~~~vvViGgG~~gle--~~l~~~GV 272 (493)
T 1y56_A 216 G--AIDSTMLFENNDM-PG-VFRRDFALEVMNVWEVAPGRKVAVTGSKADEVI--QELERWGI 272 (493)
T ss_dssp C--EEECCCCCTTTTS-TT-EEEHHHHHHHHHTSCBCSCSEEEEESTTHHHHH--HHHHHHTC
T ss_pred C--CCccCCCCCCCCC-CC-EEEcHHHHHHHHhcccCCCCEEEEECCCHHHHH--HHHHhCCc
Confidence 9 6788888887653 22 22221111 112345689999999999999 45555543
No 92
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.67 E-value=6e-17 Score=132.45 Aligned_cols=156 Identities=19% Similarity=0.310 Sum_probs=93.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCC--CCCCCCCc--cccccccceecccccc
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLG--VDPNRYPV--HSSLYKSLRVNLPREL 77 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~ 77 (259)
.+||+|||||++|+++|..|+++|.+|+|+|+.+.+|+.+.......+.... ..+..... .......+....+.+.
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 106 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQDF 106 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHHHH
Confidence 3799999999999999999999999999999999886544221111100000 00000000 0000000000001011
Q ss_pred ceec---CCCCCccCCCCCCCCCCCC--CHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEE
Q 024975 78 MGFQ---AYPFVARNYEGSVDLRRYP--GHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEE 152 (259)
Q Consensus 78 ~~~~---~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~ 152 (259)
..+. ..++... .....|+ ....+.+.+.+.+.+.+++ ++++++|+++...+ +.|.|.+.++ .
T Consensus 107 ~~~~~~~Gi~~~~~-----~~g~~~~~~~~~~l~~~L~~~l~~~Gv~--i~~~~~V~~i~~~~-~~~~V~~~~g-----~ 173 (417)
T 3v76_A 107 VALVERHGIGWHEK-----TLGQLFCDHSAKDIIRMLMAEMKEAGVQ--LRLETSIGEVERTA-SGFRVTTSAG-----T 173 (417)
T ss_dssp HHHHHHTTCCEEEC-----STTEEEESSCHHHHHHHHHHHHHHHTCE--EECSCCEEEEEEET-TEEEEEETTE-----E
T ss_pred HHHHHHcCCCcEEe-----eCCEEeeCCCHHHHHHHHHHHHHHCCCE--EEECCEEEEEEEeC-CEEEEEECCc-----E
Confidence 0000 0111000 1112222 3468889999999889999 99999999999876 6688877653 6
Q ss_pred EEeCEEEEccCCCCCCcc
Q 024975 153 ETFDAVVVCNGHFSVPRL 170 (259)
Q Consensus 153 ~~ad~VIlAtG~~s~~~~ 170 (259)
+.||.||+|||.++.|..
T Consensus 174 i~ad~VIlAtG~~S~p~~ 191 (417)
T 3v76_A 174 VDAASLVVASGGKSIPKM 191 (417)
T ss_dssp EEESEEEECCCCSSCGGG
T ss_pred EEeeEEEECCCCccCCCC
Confidence 999999999998876543
No 93
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=99.64 E-value=2.6e-18 Score=141.76 Aligned_cols=165 Identities=13% Similarity=0.163 Sum_probs=95.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHH--cCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccc
Q 024975 1 MFRHVAVIGAGAAGLVVGHELLR--EGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELM 78 (259)
Q Consensus 1 ~~~~v~IIG~G~~Gl~~a~~L~~--~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (259)
|++||+|||||++|+++|..|++ .+.+|+|+|+++.++.... ...+. ....
T Consensus 1 M~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~-----------------------~~~~~----~g~~ 53 (430)
T 3h28_A 1 MAKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPA-----------------------FPHLA----MGWR 53 (430)
T ss_dssp -CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGG-----------------------HHHHH----HTCS
T ss_pred CCCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCC-----------------------cchhc----cCcc
Confidence 67999999999999999999999 7899999999865431100 00000 0000
Q ss_pred eecCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEE
Q 024975 79 GFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAV 158 (259)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~V 158 (259)
.. .++...+.+.+.+.+++ ++. .+|+.++... ..|.+.++. .+.+|+|
T Consensus 54 ~~----------------------~~~~~~~~~~~~~~gv~--~~~-~~v~~id~~~---~~v~~~~g~----~i~~d~l 101 (430)
T 3h28_A 54 KF----------------------EDISVPLAPLLPKFNIE--FIN-EKAESIDPDA---NTVTTQSGK----KIEYDYL 101 (430)
T ss_dssp CG----------------------GGSEEESTTTGGGGTEE--EEC-SCEEEEETTT---TEEEETTCC----EEECSEE
T ss_pred CH----------------------HHHHHHHHHHHHhcCCE--EEE-EEEEEEECCC---CEEEECCCc----EEECCEE
Confidence 00 11111122233456777 654 5888887543 256666544 7999999
Q ss_pred EEccCCCCCCccCCCCCCCCCCCceEEcccCCCC--------CCCCCCeEEEEccCcCH------HHHHHHH----hccc
Q 024975 159 VVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIP--------NPFQDQVVILIGHYASG------LDIKRDL----AGFA 220 (259)
Q Consensus 159 IlAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~--------~~~~~~~v~viG~G~~a------~e~a~~l----~~~~ 220 (259)
|+||| +.+..| +... .+........... ...++++++|||+|.++ +|+|..+ .+.+
T Consensus 102 iiAtG--~~~~~p---g~~~-~g~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~g 175 (430)
T 3h28_A 102 VIATG--PKLVFG---AEGQ-EENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRG 175 (430)
T ss_dssp EECCC--CEEECC---SBTH-HHHSCCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTT
T ss_pred EEcCC--cccccC---CCCC-cCCccCcCCHHHHHHHHHHHHHHHhcCCeEEEEcCCCCCcCcHHHHHHHHHHHHHHHcC
Confidence 99999 666655 3221 0000000000000 00013457899998765 8887544 4444
Q ss_pred ----CeEEEEecCC
Q 024975 221 ----KEVHIASRSV 230 (259)
Q Consensus 221 ----~~v~~~~r~~ 230 (259)
.+|+++++.+
T Consensus 176 ~~~~~~V~~v~~~~ 189 (430)
T 3h28_A 176 IRYKVPMTFITSEP 189 (430)
T ss_dssp CGGGCCEEEECSSS
T ss_pred CccceEEEEecCCc
Confidence 4799999876
No 94
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.62 E-value=4.1e-16 Score=129.13 Aligned_cols=157 Identities=22% Similarity=0.326 Sum_probs=93.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCC-CC---CCc-ccc-ccccceeccc
Q 024975 1 MFRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDP-NR---YPV-HSS-LYKSLRVNLP 74 (259)
Q Consensus 1 ~~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~-~~---~~~-~~~-~~~~~~~~~~ 74 (259)
|.+||+|||||++|+++|..|+++|.+|+|+|+.+.+|+................+ .. .+. ... .+..+.....
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNN 104 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSCH
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcCH
Confidence 45899999999999999999999999999999998877543322111111000000 00 000 000 0000000000
Q ss_pred ccccee-c--CCCCCccCCCCCCCCCCCC---CHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCC
Q 024975 75 RELMGF-Q--AYPFVARNYEGSVDLRRYP---GHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDD 148 (259)
Q Consensus 75 ~~~~~~-~--~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~ 148 (259)
.+...+ . ..++... .....|| ....+.+.|.+.+.+.+++ ++++++|+++...++..|.|.+.++.
T Consensus 105 ~~~~~~~~~~G~~~~~~-----~~g~~~p~~~~~~~l~~~L~~~~~~~GV~--i~~~~~V~~i~~~~~~v~~V~~~~G~- 176 (447)
T 2i0z_A 105 EDIITFFENLGVKLKEE-----DHGRMFPVSNKAQSVVDALLTRLKDLGVK--IRTNTPVETIEYENGQTKAVILQTGE- 176 (447)
T ss_dssp HHHHHHHHHTTCCEEEC-----GGGEEEETTCCHHHHHHHHHHHHHHTTCE--EECSCCEEEEEEETTEEEEEEETTCC-
T ss_pred HHHHHHHHhcCCceEEe-----eCCEEECCCCCHHHHHHHHHHHHHHCCCE--EEeCcEEEEEEecCCcEEEEEECCCC-
Confidence 000000 0 0011000 1112222 3477888888888888999 99999999999765333788876643
Q ss_pred ceEEEEeCEEEEccCCCCCC
Q 024975 149 VVEEETFDAVVVCNGHFSVP 168 (259)
Q Consensus 149 ~~~~~~ad~VIlAtG~~s~~ 168 (259)
.+.+|.||+|||.++.|
T Consensus 177 ---~i~Ad~VVlAtGg~s~~ 193 (447)
T 2i0z_A 177 ---VLETNHVVIAVGGKSVP 193 (447)
T ss_dssp ---EEECSCEEECCCCSSSG
T ss_pred ---EEECCEEEECCCCCcCC
Confidence 69999999999987744
No 95
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.61 E-value=1.5e-14 Score=117.81 Aligned_cols=155 Identities=16% Similarity=0.180 Sum_probs=90.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeee----CCCCCCCCCCCCCCCCCccccccccceecccccc
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIY----TSETESDPLGVDPNRYPVHSSLYKSLRVNLPREL 77 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (259)
.|||+||||||+|+++|+.|+++|++|+|+||.+.+|..... .+.. ...++.......+.. .........+...
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~~-l~~l~~~~~~~~~~~-~~~~~~~~~~~~~ 81 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGI-LNEADIKADRSFIAN-EVKGARIYGPSEK 81 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHH-HHHTTCCCCTTTEEE-EESEEEEECTTCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHHH-HHHcCCCchhhhhhc-ccceEEEEeCCCc
Confidence 489999999999999999999999999999998776532110 0000 000000000000000 0011111111110
Q ss_pred ceecCCCCCccCCCCCCCCCC-CCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeC
Q 024975 78 MGFQAYPFVARNYEGSVDLRR-YPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFD 156 (259)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad 156 (259)
... ... ......... ...+..+...|.+.+.+.|++ ++++++|+++...+ +.........++....+++|
T Consensus 82 ~~~-----~~~-~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~--~~~~~~v~~~~~~~-~~~~~v~~~~~~~~~~~~a~ 152 (397)
T 3oz2_A 82 RPI-----ILQ-SEKAGNEVGYVLERDKFDKHLAALAAKAGAD--VWVKSPALGVIKEN-GKVAGAKIRHNNEIVDVRAK 152 (397)
T ss_dssp SCE-----EEE-CSSSSCCCEEEECHHHHHHHHHHHHHHHTCE--EESSCCEEEEEEET-TEEEEEEEEETTEEEEEEEE
T ss_pred eEe-----ecc-ccccCCceeEEEEHHHHHHHHHHHHHhcCcE--Eeeeeeeeeeeecc-ceeeeeeecccccceEEEEe
Confidence 000 000 000011111 246788999999999999999 99999999998876 43333333333445679999
Q ss_pred EEEEccCCCCC
Q 024975 157 AVVVCNGHFSV 167 (259)
Q Consensus 157 ~VIlAtG~~s~ 167 (259)
.||.|+|..|.
T Consensus 153 ~vIgAdG~~S~ 163 (397)
T 3oz2_A 153 MVIAADGFESE 163 (397)
T ss_dssp EEEECCCTTCH
T ss_pred EEEeCCccccH
Confidence 99999997664
No 96
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.60 E-value=1.4e-14 Score=121.41 Aligned_cols=153 Identities=24% Similarity=0.234 Sum_probs=92.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCce---eeeCCCCC--CCCCCCCCCCCCccccccccceecccc
Q 024975 1 MFRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGS---WIYTSETE--SDPLGVDPNRYPVHSSLYKSLRVNLPR 75 (259)
Q Consensus 1 ~~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~---~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (259)
+++||+||||||+|+++|..|+++|++|+|+|+.+.++.. ....+... ....+. .+.+....+.
T Consensus 10 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl-----------~~~~~~~~~~ 78 (500)
T 2qa1_A 10 SDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGI-----------LPRFGEVETS 78 (500)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTC-----------GGGGCSCCBC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCC-----------HHHHHhcccc
Confidence 3589999999999999999999999999999998765311 00000000 000000 0000000000
Q ss_pred ccceecCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEe
Q 024975 76 ELMGFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETF 155 (259)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~a 155 (259)
....+....+...............++..+.+.|.+.+.+.+++ ++++++|++++.++ +.+++.+.++++ ...+++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~--v~~~~~v~~i~~~~-~~v~v~~~~~~g-~~~~~a 154 (500)
T 2qa1_A 79 TQGHFGGLPIDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGAD--IRRGHEVLSLTDDG-AGVTVEVRGPEG-KHTLRA 154 (500)
T ss_dssp CEEEETTEEEEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCE--EEETCEEEEEEEET-TEEEEEEEETTE-EEEEEE
T ss_pred ccccccceecccccCCCCCCceeecCHHHHHHHHHHHHHHCCCE--EECCcEEEEEEEcC-CeEEEEEEcCCC-CEEEEe
Confidence 00001000000000000000112234578889999999888998 99999999999876 678888887654 357999
Q ss_pred CEEEEccCCCCCC
Q 024975 156 DAVVVCNGHFSVP 168 (259)
Q Consensus 156 d~VIlAtG~~s~~ 168 (259)
|+||.|+|.+|..
T Consensus 155 ~~vVgADG~~S~V 167 (500)
T 2qa1_A 155 AYLVGCDGGRSSV 167 (500)
T ss_dssp SEEEECCCTTCHH
T ss_pred CEEEECCCcchHH
Confidence 9999999987753
No 97
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.59 E-value=1.9e-14 Score=120.57 Aligned_cols=153 Identities=24% Similarity=0.174 Sum_probs=93.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCce---eeeCCCCC--CCCCCCCCCCCCccccccccceecccc
Q 024975 1 MFRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGS---WIYTSETE--SDPLGVDPNRYPVHSSLYKSLRVNLPR 75 (259)
Q Consensus 1 ~~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~---~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (259)
+.+||+||||||+|+++|..|+++|++|+|+|+.+.++.. ....+... ....+. .+.+....+.
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl-----------~~~~~~~~~~ 79 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGI-----------LPAFGPVETS 79 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTC-----------GGGGCSCCEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCC-----------HHHHHhcccc
Confidence 3589999999999999999999999999999998665311 00000000 000000 0000000000
Q ss_pred ccceecCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEe
Q 024975 76 ELMGFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETF 155 (259)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~a 155 (259)
....+....+...............++..+.+.|.+.+.+.+++ ++++++|++++.++ +.+++.+.++++ ...+++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~--v~~~~~v~~i~~~~-~~v~v~~~~~~g-~~~~~a 155 (499)
T 2qa2_A 80 TQGHFGGRPVDFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAE--LLRGHTVRALTDEG-DHVVVEVEGPDG-PRSLTT 155 (499)
T ss_dssp SEEEETTEEEEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCE--EEESCEEEEEEECS-SCEEEEEECSSC-EEEEEE
T ss_pred ccceecceecccccCCCCCCceEecCHHHHHHHHHHHHHhCCCE--EEcCCEEEEEEEeC-CEEEEEEEcCCC-cEEEEe
Confidence 00001000000000000000012234678899999999888998 99999999999876 678888887654 357999
Q ss_pred CEEEEccCCCCCC
Q 024975 156 DAVVVCNGHFSVP 168 (259)
Q Consensus 156 d~VIlAtG~~s~~ 168 (259)
|+||.|+|.+|..
T Consensus 156 ~~vVgADG~~S~V 168 (499)
T 2qa2_A 156 RYVVGCDGGRSTV 168 (499)
T ss_dssp EEEEECCCTTCHH
T ss_pred CEEEEccCcccHH
Confidence 9999999987753
No 98
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.58 E-value=3.5e-15 Score=122.75 Aligned_cols=151 Identities=17% Similarity=0.119 Sum_probs=89.9
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCC-CCccc-cccccceecc--ccccc
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNR-YPVHS-SLYKSLRVNL--PRELM 78 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~--~~~~~ 78 (259)
+||+|||||++|+++|+.|+++|++|+|+|+.+.+....-. ...+.. ..+.. ...+.+.... .....
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~g~---------~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 76 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVIGE---------SLLPRCMEHLDEAGFLDAVKAQGFQQKFGA 76 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCC---------BCCGGGHHHHHHTTCHHHHHHTTCEEECEE
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccC---------cccHhHHHHHHHcCChHHHHHcCCcccCCc
Confidence 79999999999999999999999999999998643210000 000000 00000 0000000000 00000
Q ss_pred ee------cCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEE
Q 024975 79 GF------QAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEE 152 (259)
Q Consensus 79 ~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~ 152 (259)
.+ ..+.+..... ..........+..+.+.|.+.+.+.|++ ++++++|+++...+ +.+.+.+...++....
T Consensus 77 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~L~~~a~~~gv~--i~~~~~v~~i~~~~-~~~~v~v~~~~g~~~~ 152 (421)
T 3nix_A 77 KFVRGKEIADFNFSDQFS-NGWNWTWQVPRGNFDKTLADEAARQGVD--VEYEVGVTDIKFFG-TDSVTTIEDINGNKRE 152 (421)
T ss_dssp EEEETTEEEEEETTSCSS-CSCCCEEECCHHHHHHHHHHHHHHHTCE--EECSEEEEEEEEET-TEEEEEEEETTSCEEE
T ss_pred EEEeCCeeEEEeehhhcC-CCCCceeEECHHHHHHHHHHHHHhCCCE--EEcCCEEEEEEEeC-CEEEEEEEcCCCCEEE
Confidence 00 0011110000 0011112256688999999999888999 99999999999876 5666666655555557
Q ss_pred EEeCEEEEccCCCC
Q 024975 153 ETFDAVVVCNGHFS 166 (259)
Q Consensus 153 ~~ad~VIlAtG~~s 166 (259)
+.+|.||+|+|.++
T Consensus 153 ~~a~~vV~A~G~~s 166 (421)
T 3nix_A 153 IEARFIIDASGYGR 166 (421)
T ss_dssp EEEEEEEECCGGGC
T ss_pred EEcCEEEECCCCch
Confidence 99999999999765
No 99
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.58 E-value=1.9e-15 Score=121.02 Aligned_cols=151 Identities=18% Similarity=0.274 Sum_probs=86.4
Q ss_pred CCeEEEECCChHHHHHHHHHHH---cCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCc--ccc-------ccccc
Q 024975 2 FRHVAVIGAGAAGLVVGHELLR---EGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPV--HSS-------LYKSL 69 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~---~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~--~~~-------~~~~~ 69 (259)
|+||+|||||++|+++|+.|.+ .|++|+||||++.+||.+..................++ ... .+..+
T Consensus 1 m~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~ 80 (342)
T 3qj4_A 1 MAQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYDEL 80 (342)
T ss_dssp CEEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHHHH
T ss_pred CCcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHHHH
Confidence 5799999999999999999999 89999999999999987654321100000000000000 000 00000
Q ss_pred eeccccccceecCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCc
Q 024975 70 RVNLPRELMGFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDV 149 (259)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~ 149 (259)
..... ... +...............|.....+..+...++++.+.+ ++++++|+++...+ +.|.|.+.++.
T Consensus 81 ~~~g~--~~~---~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~--i~~~~~V~~i~~~~-~~~~v~~~~g~-- 150 (342)
T 3qj4_A 81 LAYGV--LRP---LSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESGAE--VYFRHRVTQINLRD-DKWEVSKQTGS-- 150 (342)
T ss_dssp HHTTS--CEE---CCSCEETCCC--CCEEEECTTCTTHHHHHHHHHHTCE--EESSCCEEEEEECS-SSEEEEESSSC--
T ss_pred HhCCC--eec---CchhhcceeccCCccceecCCCHHHHHHHHHHhcCCE--EEeCCEEEEEEEcC-CEEEEEECCCC--
Confidence 00000 000 0000000000001111222233445555555556888 99999999999876 77999887764
Q ss_pred eEEEEeCEEEEccCC
Q 024975 150 VEEETFDAVVVCNGH 164 (259)
Q Consensus 150 ~~~~~ad~VIlAtG~ 164 (259)
.+.||.||+|+..
T Consensus 151 --~~~ad~vV~A~p~ 163 (342)
T 3qj4_A 151 --PEQFDLIVLTMPV 163 (342)
T ss_dssp --CEEESEEEECSCH
T ss_pred --EEEcCEEEECCCH
Confidence 5799999999984
No 100
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.57 E-value=2.1e-14 Score=117.12 Aligned_cols=155 Identities=17% Similarity=0.166 Sum_probs=90.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCC---CCCCCCCCCCCCccccccccceeccccccc
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETE---SDPLGVDPNRYPVHSSLYKSLRVNLPRELM 78 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (259)
++||+|||||++|+++|+.|+++|++|+|+|+.+.+|+......... ...++..+.... ....+..+....+....
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~-~~~~~~~~~~~~~~~~~ 82 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSF-IANEVKGARIYGPSEKR 82 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTT-EEEEESEEEEECTTCSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHH-hhhhcceEEEEcCCCCE
Confidence 47999999999999999999999999999999886654222110000 000001000000 00000011100000000
Q ss_pred eecCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEE-EEEEecCCceEEEEeCE
Q 024975 79 GFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWK-VKSRKKDDVVEEETFDA 157 (259)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~-v~~~~g~~~~~~~~ad~ 157 (259)
...++.... .........+..+.+.|.+.+.+.|++ ++++++|+++...+ +.+. |.+.+. +....+.+|.
T Consensus 83 -~~~~~~~~~----~~~~~~~~~~~~l~~~L~~~~~~~gv~--i~~~~~v~~i~~~~-~~v~gv~~~~~-~~~~~~~a~~ 153 (397)
T 3cgv_A 83 -PIILQSEKA----GNEVGYVLERDKFDKHLAALAAKAGAD--VWVKSPALGVIKEN-GKVAGAKIRHN-NEIVDVRAKM 153 (397)
T ss_dssp -CEEEC---------CCCEEEECHHHHHHHHHHHHHHHTCE--EESSCCEEEEEEET-TEEEEEEEEET-TEEEEEEEEE
T ss_pred -EEEEecccc----CCceeEEEeHHHHHHHHHHHHHhCCCE--EEECCEEEEEEEeC-CEEEEEEEEEC-CeEEEEEcCE
Confidence 000000000 001112245688999999999889999 99999999999876 6665 777542 2235799999
Q ss_pred EEEccCCCC
Q 024975 158 VVVCNGHFS 166 (259)
Q Consensus 158 VIlAtG~~s 166 (259)
||.|+|.+|
T Consensus 154 vV~A~G~~s 162 (397)
T 3cgv_A 154 VIAADGFES 162 (397)
T ss_dssp EEECCCTTC
T ss_pred EEECCCcch
Confidence 999999766
No 101
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.57 E-value=3.8e-14 Score=120.36 Aligned_cols=155 Identities=18% Similarity=0.100 Sum_probs=89.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCC-CCcc-ccccccceeccccccce
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNR-YPVH-SSLYKSLRVNLPRELMG 79 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~ 79 (259)
.+||+||||||+|+++|+.|+++|++|+|||+.+.+.....-. ...+.. ..+. ...++.+..........
T Consensus 49 ~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~--------~l~~~s~~~l~~lGl~~~l~~~~~~~~~~ 120 (570)
T 3fmw_A 49 TTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAG--------ALHIRTVETLDLRGLLDRFLEGTQVAKGL 120 (570)
T ss_dssp --CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCC--------CBCHHHHHHHHTTTCHHHHTTSCCBCSBC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEE--------EECHHHHHHHHHcCChHHHHhcCcccCCc
Confidence 4799999999999999999999999999999986553110000 000000 0000 00000000000000000
Q ss_pred -ecCC---CCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEe
Q 024975 80 -FQAY---PFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETF 155 (259)
Q Consensus 80 -~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~a 155 (259)
+... .+................+..+.+.|.+.+.+.+++ ++++++|++++..+ +.++|.+.+.++. ..+++
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~--i~~~~~v~~l~~~~-~~v~v~~~~~~G~-~~~~a 196 (570)
T 3fmw_A 121 PFAGIFTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAE--IPRGHEVTRLRQDA-EAVEVTVAGPSGP-YPVRA 196 (570)
T ss_dssp CBTTBCTTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEE--CCBSCEEEECCBCS-SCEEEEEEETTEE-EEEEE
T ss_pred eeCCcccccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCE--EEeCCEEEEEEEcC-CeEEEEEEeCCCc-EEEEe
Confidence 0000 000000000011122356688999999999888988 99999999998876 6788888543321 47999
Q ss_pred CEEEEccCCCCCC
Q 024975 156 DAVVVCNGHFSVP 168 (259)
Q Consensus 156 d~VIlAtG~~s~~ 168 (259)
|+||.|+|.+|..
T Consensus 197 ~~vV~ADG~~S~v 209 (570)
T 3fmw_A 197 RYGVGCDGGRSTV 209 (570)
T ss_dssp SEEEECSCSSCHH
T ss_pred CEEEEcCCCCchH
Confidence 9999999987643
No 102
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.56 E-value=5.3e-14 Score=119.15 Aligned_cols=162 Identities=18% Similarity=0.103 Sum_probs=92.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCC-----CCCCCCCCC--CCCccccccc-----cc
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETE-----SDPLGVDPN--RYPVHSSLYK-----SL 69 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~-----~~~~~~~~~--~~~~~~~~~~-----~~ 69 (259)
.+||+||||||+|+++|+.|+++|++|+|+|+.+.++....-..-.. ...++.... .......... ..
T Consensus 5 ~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 84 (535)
T 3ihg_A 5 EVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVIRLA 84 (535)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCEEEEE
T ss_pred cCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCcccccceeeeEE
Confidence 47999999999999999999999999999999876531100000000 000000000 0000000000 00
Q ss_pred eeccccccceec-CCCCCc-cCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCC----cEEEEE
Q 024975 70 RVNLPRELMGFQ-AYPFVA-RNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESN----KWKVKS 143 (259)
Q Consensus 70 ~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~----~~~v~~ 143 (259)
..........+. .++... .............++..+..+|.+.+.+.+++ ++++++|++++..+ + .+++.+
T Consensus 85 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~--i~~~~~v~~i~~~~-~~~~~~v~v~~ 161 (535)
T 3ihg_A 85 ESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGA--IRFGTRLLSFRQHD-DDAGAGVTARL 161 (535)
T ss_dssp SSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCE--EESSCEEEEEEEEC-GGGCSEEEEEE
T ss_pred eccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCE--EEeCCEEEEEEECC-CCccccEEEEE
Confidence 000000000000 000000 00000011123356788999999999888998 99999999999876 5 788888
Q ss_pred EecCCceEEEEeCEEEEccCCCCC
Q 024975 144 RKKDDVVEEETFDAVVVCNGHFSV 167 (259)
Q Consensus 144 ~~g~~~~~~~~ad~VIlAtG~~s~ 167 (259)
.++++ ...+++|+||.|+|.+|.
T Consensus 162 ~~~~~-~~~i~a~~vV~AdG~~S~ 184 (535)
T 3ihg_A 162 AGPDG-EYDLRAGYLVGADGNRSL 184 (535)
T ss_dssp EETTE-EEEEEEEEEEECCCTTCH
T ss_pred EcCCC-eEEEEeCEEEECCCCcch
Confidence 87643 457999999999998763
No 103
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.56 E-value=2e-14 Score=104.37 Aligned_cols=114 Identities=26% Similarity=0.414 Sum_probs=82.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
|+||+|||||++|+.+|..|.+.|.+|+|+|+.+..-.... .+ ..+.
T Consensus 1 ~~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~-------------------------~~--------~~~~ 47 (180)
T 2ywl_A 1 MWDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVS-------------------------RV--------PNYP 47 (180)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCS-------------------------CC--------CCST
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCch-------------------------hh--------hccC
Confidence 58999999999999999999999999999999762210000 00 0000
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEc
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlA 161 (259)
.++ ......++.+++.+.+++.+++ ++.+ +|++++..+ +.+.+.++++ .+.+|.||+|
T Consensus 48 ~~~-------------~~~~~~~~~~~l~~~~~~~gv~--v~~~-~v~~i~~~~-~~~~v~~~~g-----~i~ad~vI~A 105 (180)
T 2ywl_A 48 GLL-------------DEPSGEELLRRLEAHARRYGAE--VRPG-VVKGVRDMG-GVFEVETEEG-----VEKAERLLLC 105 (180)
T ss_dssp TCT-------------TCCCHHHHHHHHHHHHHHTTCE--EEEC-CCCEEEECS-SSEEEECSSC-----EEEEEEEEEC
T ss_pred CCc-------------CCCCHHHHHHHHHHHHHHcCCE--EEeC-EEEEEEEcC-CEEEEEECCC-----EEEECEEEEC
Confidence 000 0123478889999999999998 8988 999998865 5677776543 6899999999
Q ss_pred cCCCCCCccCC
Q 024975 162 NGHFSVPRLAQ 172 (259)
Q Consensus 162 tG~~s~~~~~~ 172 (259)
+|. .|.++.
T Consensus 106 ~G~--~~~~~~ 114 (180)
T 2ywl_A 106 THK--DPTLPS 114 (180)
T ss_dssp CTT--CCHHHH
T ss_pred CCC--CCCccc
Confidence 994 454433
No 104
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.56 E-value=6.3e-15 Score=124.95 Aligned_cols=184 Identities=15% Similarity=0.122 Sum_probs=102.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC-CcCceeeeCCCCCCCCCCCCCCCCCccc-cccccceecc------
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE-QVGGSWIYTSETESDPLGVDPNRYPVHS-SLYKSLRVNL------ 73 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~------ 73 (259)
.+||+|||||++|+++|..|++.|.+|+|+|++. .+|.. .|.+....... .....+....
T Consensus 28 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~------------~Cnps~ggia~~~lv~ei~algg~~~~~ 95 (651)
T 3ces_A 28 PFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQM------------SCNPAIGGIGKGHLVKEVDALGGLMAKA 95 (651)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCC------------SSSSEEESTTHHHHHHHHHHTTCSHHHH
T ss_pred cCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccc------------cccccccchhhHHHHHHHHHhccHHHHH
Confidence 4799999999999999999999999999999974 33310 11110000000 0000000000
Q ss_pred -ccccceecCCCCCccCCCCCCC-CCCCCCHHHHHHHHHHHHHH-hCCceeEEeceeEEEEEEeCCCcEEEEEEecCCce
Q 024975 74 -PRELMGFQAYPFVARNYEGSVD-LRRYPGHEEVLRYLQNFARE-FGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVV 150 (259)
Q Consensus 74 -~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~-~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~ 150 (259)
......+..... . .....+ ......+..+...+.+.+.+ .+++ + ++++|+++...++..+.|.+.+|
T Consensus 96 ~d~~gi~f~~l~~--~-kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~--I-~~~~V~~L~~e~g~V~GV~t~dG---- 165 (651)
T 3ces_A 96 IDQAGIQFRILNA--S-KGPAVRATRAQADRVLYRQAVRTALENQPNLM--I-FQQAVEDLIVENDRVVGAVTQMG---- 165 (651)
T ss_dssp HHHHEEEEEEEST--T-SCGGGCEEEEEECHHHHHHHHHHHHHTCTTEE--E-EECCEEEEEESSSBEEEEEETTS----
T ss_pred hhhcccchhhhhc--c-cCcccccchhhCCHHHHHHHHHHHHHhCCCCE--E-EEEEEEEEEecCCEEEEEEECCC----
Confidence 000000100000 0 000000 00112346788888888877 5887 6 67899999876534456776654
Q ss_pred EEEEeCEEEEccCCCCCCccCCCCCCCCCCCceEEcccCCCCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecC
Q 024975 151 EEETFDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRS 229 (259)
Q Consensus 151 ~~~~ad~VIlAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~ 229 (259)
..+.||.||+|||.+ +..+.++|...+ +..+ +| |.++.+++..|.+.|.+|+.+...
T Consensus 166 ~~I~Ad~VVLATGt~--s~~~~i~G~~~~----------------~~gr---iG-g~~a~eLA~~L~~lG~~v~~~~tg 222 (651)
T 3ces_A 166 LKFRAKAVVLTVGTF--LDGKIHIGLDNY----------------SGGR---AG-DPPSIPLSRRLRELPLRVGRLKTG 222 (651)
T ss_dssp EEEEEEEEEECCSTT--TCCEEECC---------------------------------CCHHHHHHHTTTCCEEEECCE
T ss_pred CEEECCEEEEcCCCC--ccCccccCcccC----------------CCCC---cc-chhhhHHHHHHHhcCCeEEEecCC
Confidence 379999999999954 444445555432 0122 56 788999999999999999988653
No 105
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.55 E-value=3.1e-16 Score=124.67 Aligned_cols=158 Identities=13% Similarity=0.100 Sum_probs=105.8
Q ss_pred CCeEEEECCChHHHHHHHHHHH--cCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccce
Q 024975 2 FRHVAVIGAGAAGLVVGHELLR--EGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMG 79 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~--~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (259)
.+||+||||||+|++||++|++ .|++|+|||+.+.+||.+... ++...
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~--------~~~~~---------------------- 114 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLG--------GQLFS---------------------- 114 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCC--------STTCC----------------------
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeC--------CccCC----------------------
Confidence 3699999999999999999975 499999999999999876542 00000
Q ss_pred ecCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEE
Q 024975 80 FQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVV 159 (259)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VI 159 (259)
. ..+.....+.+.+.+++ +..+. . .....+.++
T Consensus 115 -----~-----------------~~l~~~~~~~~~e~Gv~--~~~~~----------~-------------~~~~~~~~~ 147 (326)
T 3fpz_A 115 -----A-----------------MVMRKPAHLFLQELEIP--YEDEG----------D-------------YVVVKHAAL 147 (326)
T ss_dssp -----C-----------------EEEETTTHHHHHHTTCC--CEECS----------S-------------EEEESCHHH
T ss_pred -----H-----------------HHHHHHHHHHHHHcCCE--EEECC----------c-------------ceecceeEE
Confidence 0 00000112334456666 43221 0 123344455
Q ss_pred EccCCCCCCccCCCCCCCCCCCceEEcccCCCCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCCCcccccCC
Q 024975 160 VCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVADETHEKQ 238 (259)
Q Consensus 160 lAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~ 238 (259)
++++ ..++.+..+|...+.+...............++++.|+|+|.+++|.+..+...+.++++..+....+..+.+
T Consensus 148 ~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viggg~~av~~a~~~~~~~~~v~i~~~~~~~~~~~~~ 224 (326)
T 3fpz_A 148 FIST--VLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCAMDPNVIELAGYKNDGTRDL 224 (326)
T ss_dssp HHHH--HHHHHHTSTTEEEETTEEEEEEEEESSCSSSSCEEEEEEEEEHHHHTCTTSSSCCCCEEEEESCBCTTSSBCT
T ss_pred EEcc--hhhhccccccceeecccccceeeccCCcccCCCEEEEEccCceeeehhhhhhhccCcEEEEeecccccccccc
Confidence 5666 4566677777766666555555455555567799999999999999999999999999999888754444433
No 106
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.55 E-value=1.4e-14 Score=121.40 Aligned_cols=139 Identities=18% Similarity=0.239 Sum_probs=88.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
.+||+|||||++|+++|..|++.|.+|+|+|+.+.+|+..... . .......+........ ..
T Consensus 92 ~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~~~~---------~-------~~~~~~~l~~~g~~~~--~~ 153 (497)
T 2bry_A 92 NTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHNVLH---------L-------WPFTIHDLRALGAKKF--YG 153 (497)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCCEEE---------C-------CHHHHHHHHTTTHHHH--CT
T ss_pred CCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCCccc---------C-------ChhHHHHHHHcCCccc--cc
Confidence 5799999999999999999999999999999988775331110 0 0000000000000000 00
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeC--CCcEEEEEEec-CCceEEEEeCEE
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVE--SNKWKVKSRKK-DDVVEEETFDAV 158 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~--~~~~~v~~~~g-~~~~~~~~ad~V 158 (259)
.+. ........+.++...|.+.+.+.+++ ++++++|+++...+ ++.|.|.+.+. +++...+.+|+|
T Consensus 154 ~~~---------~~~~~~~~~~~l~~~L~~~~~~~gv~--v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~V 222 (497)
T 2bry_A 154 RFC---------TGTLDHISIRQLQLLLLKVALLLGVE--IHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVL 222 (497)
T ss_dssp TTT---------CTTCCEEEHHHHHHHHHHHHHHTTCE--EEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEE
T ss_pred ccc---------ccccccCCHHHHHHHHHHHHHhCCCE--EEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEE
Confidence 000 00011123478888999988888998 99999999998742 25688888532 221235899999
Q ss_pred EEccCCCCCCc
Q 024975 159 VVCNGHFSVPR 169 (259)
Q Consensus 159 IlAtG~~s~~~ 169 (259)
|+|+|..+.++
T Consensus 223 V~A~G~~S~~r 233 (497)
T 2bry_A 223 ISAAGGKFVPE 233 (497)
T ss_dssp EECCCTTCCCT
T ss_pred EECCCCCcccc
Confidence 99999766543
No 107
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.54 E-value=8.9e-15 Score=116.72 Aligned_cols=156 Identities=17% Similarity=0.293 Sum_probs=84.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCcccc----ccccceec----
Q 024975 1 MFRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSS----LYKSLRVN---- 72 (259)
Q Consensus 1 ~~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~---- 72 (259)
|++||+|||||++|+++|+.|.+.|++|+|+|+.+.+||.+........ .............. ....+...
T Consensus 1 m~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (336)
T 1yvv_A 1 MTVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAG-ALDMGAQYFTARDRRFATAVKQWQAQGHVA 79 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTE-EEECSCCCBCCCSHHHHHHHHHHHHHTSEE
T ss_pred CCceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCC-eEecCCCeEecCCHHHHHHHHHHHhCCCee
Confidence 6799999999999999999999999999999999888876543211000 00000000000000 00000000
Q ss_pred -cccccceecCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceE
Q 024975 73 -LPRELMGFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVE 151 (259)
Q Consensus 73 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~ 151 (259)
.......+....+... ......|.....+..+.+.+++ +++ ++++++|++++..+ +.|.|.+.+|. .
T Consensus 80 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~--g~~--i~~~~~v~~i~~~~-~~~~v~~~~g~---~ 147 (336)
T 1yvv_A 80 EWTPLLYNFHAGRLSPS----PDEQVRWVGKPGMSAITRAMRG--DMP--VSFSCRITEVFRGE-EHWNLLDAEGQ---N 147 (336)
T ss_dssp EECCCEEEESSSBCCCC----CTTSCEEEESSCTHHHHHHHHT--TCC--EECSCCEEEEEECS-SCEEEEETTSC---E
T ss_pred eccccceeccCcccccC----CCCCccEEcCccHHHHHHHHHc--cCc--EEecCEEEEEEEeC-CEEEEEeCCCc---C
Confidence 0000000000000000 0011112111223333333332 787 99999999999876 77998877654 3
Q ss_pred EEEeCEEEEccCCCCCCc
Q 024975 152 EETFDAVVVCNGHFSVPR 169 (259)
Q Consensus 152 ~~~ad~VIlAtG~~s~~~ 169 (259)
...+|+||+|+|..+..+
T Consensus 148 ~~~a~~vV~a~g~~~~~~ 165 (336)
T 1yvv_A 148 HGPFSHVIIATPAPQAST 165 (336)
T ss_dssp EEEESEEEECSCHHHHGG
T ss_pred ccccCEEEEcCCHHHHHH
Confidence 335999999999765444
No 108
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.54 E-value=8.7e-14 Score=105.12 Aligned_cols=125 Identities=14% Similarity=0.090 Sum_probs=82.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
.+||+|||||++|+.+|..|++.|.+|+|+|+.....| +...+.. .. ......+..+.
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G-~~~~~~~-------~~---~~~~~~~~~~~----------- 60 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVM-MPFLPPK-------PP---FPPGSLLERAY----------- 60 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTT-CCSSCCC-------SC---CCTTCHHHHHC-----------
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCC-cccCccc-------cc---cchhhHHhhhc-----------
Confidence 58999999999999999999999999999999843333 2111100 00 00000000000
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHh-CCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEE
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREF-GVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVV 160 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIl 160 (259)
+ ..-+.+..+..++.+.+.+. +++ ++ +++|+++...++..+.|.+.++. .+.+|+||+
T Consensus 61 d--------------~~g~~~~~~~~~l~~~~~~~~gv~--i~-~~~v~~i~~~~~~v~~v~~~~g~----~i~a~~VV~ 119 (232)
T 2cul_A 61 D--------------PKDERVWAFHARAKYLLEGLRPLH--LF-QATATGLLLEGNRVVGVRTWEGP----PARGEKVVL 119 (232)
T ss_dssp C--------------TTCCCHHHHHHHHHHHHHTCTTEE--EE-ECCEEEEEEETTEEEEEEETTSC----CEECSEEEE
T ss_pred c--------------CCCCCHHHHHHHHHHHHHcCCCcE--EE-EeEEEEEEEeCCEEEEEEECCCC----EEECCEEEE
Confidence 0 00014578889999998886 887 66 67999998876333567666543 699999999
Q ss_pred ccCCCCCCc
Q 024975 161 CNGHFSVPR 169 (259)
Q Consensus 161 AtG~~s~~~ 169 (259)
|+|.++..+
T Consensus 120 A~G~~s~~~ 128 (232)
T 2cul_A 120 AVGSFLGAR 128 (232)
T ss_dssp CCTTCSSCE
T ss_pred CCCCChhhc
Confidence 999765444
No 109
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.53 E-value=1.9e-14 Score=120.91 Aligned_cols=156 Identities=19% Similarity=0.230 Sum_probs=88.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcC-------ceeeeCCCCC--CCCCCCCCCCCCccccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVG-------GSWIYTSETE--SDPLGVDPNRYPVHSSLYKSLRVN 72 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~g-------g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 72 (259)
.+||+||||||+|+++|+.|++.|++|+|+|+.+.++ +.|....... ....+......+.....+..+...
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~~~ 186 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP 186 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCCT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEeccc
Confidence 4799999999999999999999999999999987763 2232211000 000000000000000000000000
Q ss_pred cc--cccc-eecCCCCCccCCCCCCCCCCCC---CHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEec
Q 024975 73 LP--RELM-GFQAYPFVARNYEGSVDLRRYP---GHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKK 146 (259)
Q Consensus 73 ~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g 146 (259)
.. .... .+..+....... .....+. ....+...+.+.+.+.+++ ++++++|+++...++..+.|.+.++
T Consensus 187 ~~~~~~v~~~~~~~G~~~~i~---~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~--I~~~t~V~~I~~~~~~v~gV~l~~G 261 (549)
T 3nlc_A 187 NFYGRKVITEFVEAGAPEEIL---YVSKPHIGTFKLVTMIEKMRATIIELGGE--IRFSTRVDDLHMEDGQITGVTLSNG 261 (549)
T ss_dssp TCHHHHHHHHHHHTTCCGGGG---TBSSCCCCHHHHHHHHHHHHHHHHHTTCE--EESSCCEEEEEESSSBEEEEEETTS
T ss_pred cccHHHHHHHHHHcCCCceEe---eccccccccchHHHHHHHHHHHHHhcCCE--EEeCCEEEEEEEeCCEEEEEEECCC
Confidence 00 0000 000000000000 0011111 1256778888888888999 9999999999987634466888765
Q ss_pred CCceEEEEeCEEEEccCCCC
Q 024975 147 DDVVEEETFDAVVVCNGHFS 166 (259)
Q Consensus 147 ~~~~~~~~ad~VIlAtG~~s 166 (259)
. .+.+|.||+|+|+++
T Consensus 262 ~----~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 262 E----EIKSRHVVLAVGHSA 277 (549)
T ss_dssp C----EEECSCEEECCCTTC
T ss_pred C----EEECCEEEECCCCCh
Confidence 4 799999999999866
No 110
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.53 E-value=1.6e-14 Score=118.31 Aligned_cols=157 Identities=16% Similarity=0.134 Sum_probs=88.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcC---ceeeeCCCCC--CCCCCCCCCCCCccccccccceeccccc
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVG---GSWIYTSETE--SDPLGVDPNRYPVHSSLYKSLRVNLPRE 76 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~g---g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (259)
.+||+|||||++|+++|+.|+++|++|+|+|+.+.+. ......+... ...++.... ..........+.......
T Consensus 23 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~-~~~~~~~~~~~~~~~~~~ 101 (407)
T 3rp8_A 23 HMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDI-METFGGPLRRMAYRDFRS 101 (407)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHH-HHHHSCCCCEEEEEETTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHH-HHhhcCCCcceEEEECCC
Confidence 4899999999999999999999999999999987653 1111110000 000000000 000000000000000000
Q ss_pred cceecCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeC
Q 024975 77 LMGFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFD 156 (259)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad 156 (259)
...+..++..... ...........+..+.+.|.+.+.+ ++ ++++++|++++..+ +.+.|.+.++. .+.+|
T Consensus 102 g~~~~~~~~~~~~-~~~~~~~~~i~r~~l~~~L~~~~~~--~~--i~~~~~v~~i~~~~-~~v~v~~~~g~----~~~a~ 171 (407)
T 3rp8_A 102 GENMTQFSLAPLI-ERTGSRPCPVSRAELQREMLDYWGR--DS--VQFGKRVTRCEEDA-DGVTVWFTDGS----SASGD 171 (407)
T ss_dssp CCEEEEEECHHHH-HHHSSCCEEEEHHHHHHHHHHHHCG--GG--EEESCCEEEEEEET-TEEEEEETTSC----EEEES
T ss_pred CCEeEEecchhhh-hhcCCceEEEEHHHHHHHHHHhCCc--CE--EEECCEEEEEEecC-CcEEEEEcCCC----EEeeC
Confidence 0000000000000 0000112224567888888888865 66 99999999999886 67888887765 79999
Q ss_pred EEEEccCCCCCCc
Q 024975 157 AVVVCNGHFSVPR 169 (259)
Q Consensus 157 ~VIlAtG~~s~~~ 169 (259)
.||.|+|.+|..+
T Consensus 172 ~vV~AdG~~S~vr 184 (407)
T 3rp8_A 172 LLIAADGSHSALR 184 (407)
T ss_dssp EEEECCCTTCSSH
T ss_pred EEEECCCcChHHH
Confidence 9999999877644
No 111
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.51 E-value=1.5e-13 Score=115.76 Aligned_cols=152 Identities=17% Similarity=0.187 Sum_probs=88.7
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcC----ceeeeCCCCCCCCCCCCCCCCCccc-cccccceecc-c-c
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVG----GSWIYTSETESDPLGVDPNRYPVHS-SLYKSLRVNL-P-R 75 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~g----g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~-~ 75 (259)
+||+|||||++|+++|+.|+++|++|+|+|+.+.+. ..+..... ...+.. ...+.+.... . .
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~~~~-----------~~~l~~lgl~~~~~~~~~~~~ 76 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIGESLLPATV-----------HGICAMLGLTDEMKRAGFPIK 76 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCHHHH-----------TTHHHHTTCHHHHHTTTCCEE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCCCcccCcchH-----------HHHHHHhCcHHHHHHcCCccc
Confidence 799999999999999999999999999999986332 11100000 000000 0000000000 0 0
Q ss_pred cc--ceecC------CCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecC
Q 024975 76 EL--MGFQA------YPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKD 147 (259)
Q Consensus 76 ~~--~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~ 147 (259)
.. ..+.. +.+.... ...........+..+.+.|.+.+.+.|++ ++++++|+++...++....|.+...+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~--i~~~~~V~~v~~~~~~v~gv~~~~~d 153 (512)
T 3e1t_A 77 RGGTFRWGKEPEPWTFGFTRHP-DDPYGFAYQVERARFDDMLLRNSERKGVD--VRERHEVIDVLFEGERAVGVRYRNTE 153 (512)
T ss_dssp CEEEEECSSCSSCEEEESSSSS-SSTTCCEEBCCHHHHHHHHHHHHHHTTCE--EESSCEEEEEEEETTEEEEEEEECSS
T ss_pred cCceEEecCCccccccccccCC-CCCcceeeEecHHHHHHHHHHHHHhCCCE--EEcCCEEEEEEEECCEEEEEEEEeCC
Confidence 00 00000 0000000 00001112256788999999999888999 99999999999876332235665544
Q ss_pred CceEEEEeCEEEEccCCCCCC
Q 024975 148 DVVEEETFDAVVVCNGHFSVP 168 (259)
Q Consensus 148 ~~~~~~~ad~VIlAtG~~s~~ 168 (259)
+....+.+|.||+|+|.+|..
T Consensus 154 G~~~~i~ad~VI~AdG~~S~v 174 (512)
T 3e1t_A 154 GVELMAHARFIVDASGNRTRV 174 (512)
T ss_dssp SCEEEEEEEEEEECCCTTCSS
T ss_pred CCEEEEEcCEEEECCCcchHH
Confidence 444579999999999986643
No 112
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.50 E-value=1.4e-13 Score=112.30 Aligned_cols=143 Identities=17% Similarity=0.159 Sum_probs=84.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCc----CceeeeCCCCC--CCCCCCCCCCCCccccccccceecccc
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQV----GGSWIYTSETE--SDPLGVDPNRYPVHSSLYKSLRVNLPR 75 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~----gg~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (259)
++||+|||||++|+++|..|+++|++|+|+|+.+.+ |+.+...+... ...++.... ....+.
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~------------~~~~~~ 72 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELD------------SISVPS 72 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGG------------GTCBCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCccc------------cccccc
Confidence 479999999999999999999999999999998653 22221110000 000000000 000000
Q ss_pred ccceecCC-CCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEE
Q 024975 76 ELMGFQAY-PFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEET 154 (259)
Q Consensus 76 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ 154 (259)
....+.+. ..... ........+..+..+.+.|.+.+ .+++ ++++++|+++...+ +.+.|.+.++. .+.
T Consensus 73 ~~~~~~~~~~g~~~--~~~~~~~~~~~~~~l~~~L~~~~--~~~~--i~~~~~v~~i~~~~-~~v~v~~~~g~----~~~ 141 (397)
T 2vou_A 73 SSMEYVDALTGERV--GSVPADWRFTSYDSIYGGLYELF--GPER--YHTSKCLVGLSQDS-ETVQMRFSDGT----KAE 141 (397)
T ss_dssp CEEEEEETTTCCEE--EEEECCCCEEEHHHHHHHHHHHH--CSTT--EETTCCEEEEEECS-SCEEEEETTSC----EEE
T ss_pred cceEEEecCCCCcc--ccccCcccccCHHHHHHHHHHhC--CCcE--EEcCCEEEEEEecC-CEEEEEECCCC----EEE
Confidence 00000000 00000 00000111234466767776654 3777 99999999999876 67888887764 799
Q ss_pred eCEEEEccCCCCC
Q 024975 155 FDAVVVCNGHFSV 167 (259)
Q Consensus 155 ad~VIlAtG~~s~ 167 (259)
+|.||.|+|.+|.
T Consensus 142 ad~vV~AdG~~S~ 154 (397)
T 2vou_A 142 ANWVIGADGGASV 154 (397)
T ss_dssp ESEEEECCCTTCH
T ss_pred CCEEEECCCcchh
Confidence 9999999998765
No 113
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=99.50 E-value=2.9e-16 Score=129.42 Aligned_cols=36 Identities=25% Similarity=0.374 Sum_probs=31.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcC--CcEEEEeeCCC
Q 024975 1 MFRHVAVIGAGAAGLVVGHELLREG--HTVVVYEKGEQ 36 (259)
Q Consensus 1 ~~~~v~IIG~G~~Gl~~a~~L~~~g--~~v~v~e~~~~ 36 (259)
|.++|||||||++|+++|.+|++.+ .+|+|+|+++.
T Consensus 1 M~K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~ 38 (430)
T 3hyw_A 1 MAKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPY 38 (430)
T ss_dssp -CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSE
T ss_pred CCCcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCC
Confidence 6789999999999999999999865 79999999763
No 114
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.49 E-value=2e-13 Score=106.29 Aligned_cols=141 Identities=15% Similarity=0.013 Sum_probs=83.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHc-CCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceecccccccee
Q 024975 2 FRHVAVIGAGAAGLVVGHELLRE-GHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGF 80 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~-g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (259)
++||+|||||++|+++|..|+++ |.+|+|+|+.+.+|+.+.... ..............++..
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~--------~~~~~~~~~~~~~~~l~~--------- 101 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGG--------QLFSAMIVRKPAHLFLDE--------- 101 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCS--------TTCCCEEEETTTHHHHHH---------
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCC--------cchHHHHcCcHHHHHHHH---------
Confidence 46999999999999999999997 999999999988875432210 000000000000000000
Q ss_pred cCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHH-hCCceeEEeceeEEEEEEeCCCcEEEEEEe---------c-CCc
Q 024975 81 QAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFARE-FGVDQVVRLHTEVLNARLVESNKWKVKSRK---------K-DDV 149 (259)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~---------g-~~~ 149 (259)
...++... ..........++...+.+.+.+ .+++ ++++++|+++...++....+.+.. + .++
T Consensus 102 ~G~~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~gv~--i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~ 174 (284)
T 1rp0_A 102 IGVAYDEQ-----DTYVVVKHAALFTSTIMSKLLARPNVK--LFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMD 174 (284)
T ss_dssp HTCCCEEC-----SSEEEESCHHHHHHHHHHHHHTSTTEE--EEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCC
T ss_pred cCCCcccC-----CCEEEecCHHHHHHHHHHHHHhcCCCE--EEcCcEEEEEEecCCeEEEEEEeccccccccCccccCc
Confidence 01111110 0000011346677777776655 5888 999999999987753333455542 1 122
Q ss_pred eEEEEeCEEEEccCCCC
Q 024975 150 VEEETFDAVVVCNGHFS 166 (259)
Q Consensus 150 ~~~~~ad~VIlAtG~~s 166 (259)
...+.+|.||+|+|..+
T Consensus 175 ~~~i~ad~VV~AtG~~s 191 (284)
T 1rp0_A 175 PNVMEAKIVVSSCGHDG 191 (284)
T ss_dssp CEEEEEEEEEECCCSSS
T ss_pred eEEEECCEEEECCCCch
Confidence 35799999999999543
No 115
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.49 E-value=1.3e-13 Score=117.45 Aligned_cols=153 Identities=23% Similarity=0.252 Sum_probs=89.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCC-CCccc-cccccceeccc--ccc
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNR-YPVHS-SLYKSLRVNLP--REL 77 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~--~~~ 77 (259)
.+||+|||||++|+++|+.|++.|++|+|+|+.+.++..... ...+.. ..+.. ...+.+..... ...
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~G~---------~l~p~~~~~l~~lGl~~~l~~~~~~~~~~ 93 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRVGE---------SLLPGTMSILNRLGLQEKIDAQNYVKKPS 93 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCCCC---------BCCHHHHHHHHHTTCHHHHHHHCCEEECE
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCceee---------eECHHHHHHHHHcCCcHHHHhcCCcccCC
Confidence 379999999999999999999999999999998644321100 000000 00000 00000000000 000
Q ss_pred ceec--------CCCCCccCCCC-CCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCC
Q 024975 78 MGFQ--------AYPFVARNYEG-SVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDD 148 (259)
Q Consensus 78 ~~~~--------~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~ 148 (259)
..+. .+.+....... .........+..+...|.+.+.+.|++ ++++++|+++...+++.+.|.+.+ ++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~--i~~g~~V~~v~~~~g~~~~V~~~~-~G 170 (591)
T 3i3l_A 94 ATFLWGQDQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGIT--VHEETPVTDVDLSDPDRVVLTVRR-GG 170 (591)
T ss_dssp EEEECSSSCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCE--EETTCCEEEEECCSTTCEEEEEEE-TT
T ss_pred cEEEecCCCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCE--EEeCCEEEEEEEcCCCEEEEEEec-CC
Confidence 0000 00000000000 000111245688999999999889999 999999999987654678888874 23
Q ss_pred ceEEEEeCEEEEccCCCC
Q 024975 149 VVEEETFDAVVVCNGHFS 166 (259)
Q Consensus 149 ~~~~~~ad~VIlAtG~~s 166 (259)
....+.+|.||.|+|.+|
T Consensus 171 ~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 171 ESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp EEEEEEESEEEECCGGGC
T ss_pred ceEEEEcCEEEECCCCcc
Confidence 335799999999999765
No 116
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.49 E-value=8.1e-14 Score=112.44 Aligned_cols=63 Identities=11% Similarity=0.143 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEccCCCCCC
Q 024975 102 HEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVCNGHFSVP 168 (259)
Q Consensus 102 ~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlAtG~~s~~ 168 (259)
...+...+.+.+.+.|++ ++++++|+++...+++.|.|.+.++. ...+.||.||+|+|.++..
T Consensus 149 ~~~~~~~l~~~~~~~Gv~--i~~~~~v~~i~~~~~~~~~v~~~~g~--~~~~~a~~VV~A~G~~s~~ 211 (369)
T 3dme_A 149 SHALMLAYQGDAESDGAQ--LVFHTPLIAGRVRPEGGFELDFGGAE--PMTLSCRVLINAAGLHAPG 211 (369)
T ss_dssp HHHHHHHHHHHHHHTTCE--EECSCCEEEEEECTTSSEEEEECTTS--CEEEEEEEEEECCGGGHHH
T ss_pred HHHHHHHHHHHHHHCCCE--EECCCEEEEEEEcCCceEEEEECCCc--eeEEEeCEEEECCCcchHH
Confidence 367888888888899999 99999999999876445888776542 2479999999999987643
No 117
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.49 E-value=1.8e-13 Score=110.63 Aligned_cols=61 Identities=18% Similarity=0.262 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEccCCCCCCccC
Q 024975 103 EEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVCNGHFSVPRLA 171 (259)
Q Consensus 103 ~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlAtG~~s~~~~~ 171 (259)
..+...+.+.+.+.|++ ++.+++|+++...+ +.|.|.+.++ .+.+|.||+|+|.++....+
T Consensus 149 ~~l~~~l~~~~~~~G~~--i~~~~~V~~i~~~~-~~~~v~~~~g-----~~~a~~vV~a~G~~s~~l~~ 209 (372)
T 2uzz_A 149 ELAIKTWIQLAKEAGCA--QLFNCPVTAIRHDD-DGVTIETADG-----EYQAKKAIVCAGTWVKDLLP 209 (372)
T ss_dssp HHHHHHHHHHHHHTTCE--EECSCCEEEEEECS-SSEEEEESSC-----EEEEEEEEECCGGGGGGTST
T ss_pred HHHHHHHHHHHHHCCCE--EEcCCEEEEEEEcC-CEEEEEECCC-----eEEcCEEEEcCCccHHhhcc
Confidence 57888888888888998 99999999999876 5677766543 48999999999987754444
No 118
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.49 E-value=6.4e-14 Score=119.46 Aligned_cols=164 Identities=17% Similarity=0.151 Sum_probs=92.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCC-------CCCCCCCC------------Ccc
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDP-------LGVDPNRY------------PVH 62 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~-------~~~~~~~~------------~~~ 62 (259)
.+||+|||||++|+++|..|+++|.+|+|+||.+.+||............ .+...... ...
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~ 205 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNIND 205 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCCCC
Confidence 37999999999999999999999999999999988876544322111000 00000000 000
Q ss_pred ccccccceecccccccee--cCCCCCccCC-CCCCCCC-CC-----CCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEE
Q 024975 63 SSLYKSLRVNLPRELMGF--QAYPFVARNY-EGSVDLR-RY-----PGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARL 133 (259)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~-~~-----~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~ 133 (259)
......+....+.....+ ...++..... ....... .+ .....+...|.+.+.+.+++ ++++++|++|..
T Consensus 206 ~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~--i~~~~~v~~l~~ 283 (571)
T 1y0p_A 206 PALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNID--LRMNTRGIEVLK 283 (571)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCE--EESSEEEEEEEE
T ss_pred HHHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCE--EEeCCEeeEeEE
Confidence 000000000000000000 0011110000 0000000 01 22367888899999889999 999999999998
Q ss_pred eC-CCcEEEEEEecCCceEEEEeCEEEEccCCCCC
Q 024975 134 VE-SNKWKVKSRKKDDVVEEETFDAVVVCNGHFSV 167 (259)
Q Consensus 134 ~~-~~~~~v~~~~g~~~~~~~~ad~VIlAtG~~s~ 167 (259)
++ +..+.|.+.+.+++...+.+|.||+|||.++.
T Consensus 284 ~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~~ 318 (571)
T 1y0p_A 284 DDKGTVKGILVKGMYKGYYWVKADAVILATGGFAK 318 (571)
T ss_dssp CTTSCEEEEEEEETTTEEEEEECSEEEECCCCCTT
T ss_pred cCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCccc
Confidence 65 34444666653444457899999999998664
No 119
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.49 E-value=1.1e-13 Score=112.88 Aligned_cols=157 Identities=18% Similarity=0.228 Sum_probs=88.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCc------CceeeeCCCCC--CCCCCCCCCCCCcc-cccccccee
Q 024975 1 MFRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQV------GGSWIYTSETE--SDPLGVDPNRYPVH-SSLYKSLRV 71 (259)
Q Consensus 1 ~~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~------gg~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~ 71 (259)
|.+||+|||||++|+++|..|++.|++|+|+|+.+.+ ++.. ..+... ...++.... +.. ......+..
T Consensus 1 m~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~-l~~~~~~~l~~lg~~~~--~~~~~~~~~~~~~ 77 (394)
T 1k0i_A 1 MKTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGV-LEQGMVDLLREAGVDRR--MARDGLVHEGVEI 77 (394)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCE-ECHHHHHHHHHTTCCHH--HHHHCEEESCEEE
T ss_pred CCccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEe-ECHHHHHHHHHcCCcHH--HHhcCCccceEEE
Confidence 6789999999999999999999999999999997642 1111 000000 000000000 000 000000000
Q ss_pred ccccccceecCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceE
Q 024975 72 NLPRELMGFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVE 151 (259)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~ 151 (259)
....... ...+... ..........+..+.+.|.+.+.+.+++ ++++++|+++...+++.+.|.+.. ++...
T Consensus 78 ~~~~~~~---~~~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~g~~--i~~~~~v~~i~~~~~~~~~v~~~~-~g~~~ 148 (394)
T 1k0i_A 78 AFAGQRR---RIDLKRL---SGGKTVTVYGQTEVTRDLMEAREACGAT--TVYQAAEVRLHDLQGERPYVTFER-DGERL 148 (394)
T ss_dssp EETTEEE---EECHHHH---HTSCCEEECCHHHHHHHHHHHHHHTTCE--EESSCEEEEEECTTSSSCEEEEEE-TTEEE
T ss_pred EECCceE---Eeccccc---cCCCceEEechHHHHHHHHHHHHhcCCe--EEeceeEEEEEEecCCceEEEEec-CCcEE
Confidence 0000000 0000000 0000111224567778888888778888 999999999987643567887732 23334
Q ss_pred EEEeCEEEEccCCCCCCc
Q 024975 152 EETFDAVVVCNGHFSVPR 169 (259)
Q Consensus 152 ~~~ad~VIlAtG~~s~~~ 169 (259)
.+.+|.||.|+|.+|..+
T Consensus 149 ~~~a~~vV~AdG~~S~vr 166 (394)
T 1k0i_A 149 RLDCDYIAGCDGFHGISR 166 (394)
T ss_dssp EEECSEEEECCCTTCSTG
T ss_pred EEEeCEEEECCCCCcHHH
Confidence 699999999999877654
No 120
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=99.48 E-value=1.4e-13 Score=112.41 Aligned_cols=115 Identities=19% Similarity=0.195 Sum_probs=73.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHcC--CcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccce
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREG--HTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMG 79 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g--~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (259)
.++|+|||||++|+++|.+|++.+ .+|+|||+++...... ....+.. ..
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p-----------------------~~~~v~~----g~-- 52 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCY-----------------------MSNEVIG----GD-- 52 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECST-----------------------THHHHHH----TS--
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCcc-----------------------CHHHHhc----CC--
Confidence 478999999999999999999875 5899999976321000 0000000 00
Q ss_pred ecCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEE
Q 024975 80 FQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVV 159 (259)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VI 159 (259)
.+. +++..-+.+ +.+.+++ ++ ..+|++++... -.+.+.++. .+.||++|
T Consensus 53 ---~~~-----------------~~~~~~~~~-~~~~gv~--~i-~~~v~~id~~~---~~v~~~~g~----~i~yd~Lv 101 (401)
T 3vrd_B 53 ---REL-----------------ASLRVGYDG-LRAHGIQ--VV-HDSALGIDPDK---KLVKTAGGA----EFAYDRCV 101 (401)
T ss_dssp ---SCG-----------------GGGEECSHH-HHHTTCE--EE-CSCEEEEETTT---TEEEETTSC----EEECSEEE
T ss_pred ---CCH-----------------HHHhhCHHH-HHHCCCE--EE-EeEEEEEEccC---cEEEecccc----eeecceee
Confidence 000 000000111 2345777 54 55888887543 356666655 79999999
Q ss_pred EccCCCCCCccCCCCCCCC
Q 024975 160 VCNGHFSVPRLAQVPGIDS 178 (259)
Q Consensus 160 lAtG~~s~~~~~~~~g~~~ 178 (259)
+||| +.+..+.++|...
T Consensus 102 iAtG--~~~~~~~i~G~~e 118 (401)
T 3vrd_B 102 VAPG--IDLLYDKIEGYSE 118 (401)
T ss_dssp ECCC--EEECGGGSBTCCS
T ss_pred eccC--CccccCCccCchh
Confidence 9999 7888888888765
No 121
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.48 E-value=5.6e-13 Score=113.67 Aligned_cols=156 Identities=17% Similarity=0.187 Sum_probs=89.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHc------CCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCC--CCcccc--cccccee
Q 024975 2 FRHVAVIGAGAAGLVVGHELLRE------GHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNR--YPVHSS--LYKSLRV 71 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~------g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~ 71 (259)
.+||+||||||+|+++|..|++. |++|+|+||.+.+|+...... ...+.. .++... ....+..
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~-------~l~~~~l~~ll~~~~~~g~~~~~ 107 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGA-------CLDPRAFEELFPDWKEKGAPLNT 107 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCC-------EECTHHHHHHCTTHHHHTCCCCE
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCcccccc-------ccCHHHHHHHHHHHHhcCCceee
Confidence 47999999999999999999999 999999999987764321100 000000 000000 0000000
Q ss_pred ccccccceec------CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcE-EEEEE
Q 024975 72 NLPRELMGFQ------AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKW-KVKSR 144 (259)
Q Consensus 72 ~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~-~v~~~ 144 (259)
........+. .++..... ...........+..+.+.|.+.+.+.|++ ++++++|+++..++++.+ .|.+.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~--i~~g~~v~~l~~~~~g~V~gV~~~ 184 (584)
T 2gmh_A 108 PVTEDRFGILTEKYRIPVPILPGL-PMNNHGNYVVRLGHLVSWMGEQAEALGVE--VYPGYAAAEILFHEDGSVKGIATN 184 (584)
T ss_dssp ECCEEEEEEECSSCEEECCCCTTS-TTCCTTCEECCHHHHHHHHHHHHHHTTCE--EETTCCEEEEEECTTSSEEEEEEC
T ss_pred eechhheeeeccCCCccccccCcc-ccccCCCEEEeHHHHHHHHHHHHHHcCCE--EEcCCEEEEEEEcCCCCEEEEEeC
Confidence 0000000000 01100000 00001122246688999999999888999 999999999988753333 36665
Q ss_pred e----cCCce-------EEEEeCEEEEccCCCCC
Q 024975 145 K----KDDVV-------EEETFDAVVVCNGHFSV 167 (259)
Q Consensus 145 ~----g~~~~-------~~~~ad~VIlAtG~~s~ 167 (259)
+ .+++. ..+.+|+||+|+|.+|.
T Consensus 185 ~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 185 DVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGH 218 (584)
T ss_dssp CEEECTTSCEEEEEECCCEEECSEEEECCCTTCH
T ss_pred CccccCCCCcccccCCceEEECCEEEEeeCCCch
Confidence 3 12211 37999999999998764
No 122
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.48 E-value=1.6e-13 Score=113.88 Aligned_cols=153 Identities=14% Similarity=0.035 Sum_probs=88.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCC-C---CCCCCCCCCCCCccccccccceecccccc
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSET-E---SDPLGVDPNRYPVHSSLYKSLRVNLPREL 77 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (259)
.+||+||||||+|+++|..|+++|++|+|+|+.+.+.......... . ...++...............+....+...
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~ 85 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPDMQ 85 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTTSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCCCc
Confidence 3799999999999999999999999999999987542110000000 0 00000000000000000000000000000
Q ss_pred ceecCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEE-EEEEec-CCceEEEEe
Q 024975 78 MGFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWK-VKSRKK-DDVVEEETF 155 (259)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~-v~~~~g-~~~~~~~~a 155 (259)
.. +++ ........+..+.+.|.+.+.+.|++ ++++++|+++...+ +.+. |.+.+. +++...+.+
T Consensus 86 ~~---~~~--------~~~~~~i~r~~l~~~L~~~a~~~gv~--i~~~~~v~~i~~~~-~~v~gv~~~~~~~G~~~~~~a 151 (453)
T 3atr_A 86 TV---WTV--------NGEGFELNAPLYNQRVLKEAQDRGVE--IWDLTTAMKPIFED-GYVKGAVLFNRRTNEELTVYS 151 (453)
T ss_dssp CE---EEE--------EEEEEEECHHHHHHHHHHHHHHTTCE--EESSEEEEEEEEET-TEEEEEEEEETTTTEEEEEEC
T ss_pred eE---EeE--------CCCcEEEcHHHHHHHHHHHHHHcCCE--EEeCcEEEEEEEEC-CEEEEEEEEEcCCCceEEEEc
Confidence 00 000 00011235678999999998888999 99999999998875 4443 666543 344457999
Q ss_pred CEEEEccCCCCCC
Q 024975 156 DAVVVCNGHFSVP 168 (259)
Q Consensus 156 d~VIlAtG~~s~~ 168 (259)
|.||+|+|.+|..
T Consensus 152 d~VV~AdG~~s~v 164 (453)
T 3atr_A 152 KVVVEATGYSRSF 164 (453)
T ss_dssp SEEEECCGGGCTT
T ss_pred CEEEECcCCchhh
Confidence 9999999986653
No 123
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.48 E-value=2.1e-13 Score=118.45 Aligned_cols=58 Identities=21% Similarity=0.353 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEccCCCCC
Q 024975 103 EEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVCNGHFSV 167 (259)
Q Consensus 103 ~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlAtG~~s~ 167 (259)
..+...+.+.+.+.|++ ++++++|+++...+ +.|.|.+.++. .+.+|.||+|+|.++.
T Consensus 417 ~~l~~aL~~~a~~~Gv~--i~~~t~V~~l~~~~-~~v~V~t~~G~----~i~Ad~VVlAtG~~s~ 474 (676)
T 3ps9_A 417 AELTRNVLELAQQQGLQ--IYYQYQLQNFSRKD-DCWLLNFAGDQ----QATHSVVVLANGHQIS 474 (676)
T ss_dssp HHHHHHHHHHHHHTTCE--EEESCCEEEEEEET-TEEEEEETTSC----EEEESEEEECCGGGGG
T ss_pred HHHHHHHHHHHHhCCCE--EEeCCeeeEEEEeC-CeEEEEECCCC----EEECCEEEECCCcchh
Confidence 67888888888888999 99999999999886 66888776654 6999999999998754
No 124
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.48 E-value=4.1e-13 Score=109.66 Aligned_cols=153 Identities=16% Similarity=0.106 Sum_probs=87.9
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcC---ceeeeCCCCC--CCCCCCCCCCCCccccccccceecccccc
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVG---GSWIYTSETE--SDPLGVDPNRYPVHSSLYKSLRVNLPREL 77 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~g---g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (259)
+||+|||||++|+++|..|+++|++|+|+|+.+.+. ......+... ....+.... ..........+..... ..
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~-~~~~~~~~~~~~~~~~-~g 84 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAE-VTRRGGRVRHELEVYH-DG 84 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHH-HHHTTCEEECEEEEEE-TT
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHH-HHHhCCCcceeEEEeC-CC
Confidence 699999999999999999999999999999986541 1111000000 000000000 0000000000000000 00
Q ss_pred ceecCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHh-CCceeEEeceeEEEEEEeCCCcE--EEEEEecCCceEEEE
Q 024975 78 MGFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREF-GVDQVVRLHTEVLNARLVESNKW--KVKSRKKDDVVEEET 154 (259)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~v~~~~~v~~i~~~~~~~~--~v~~~~g~~~~~~~~ 154 (259)
.....++.... ..........+..+.+.|.+.+.+. +++ ++++++|++++..+ +.+ .|.+.+|. .+.
T Consensus 85 ~~~~~~~~~~~---~~~~~~~~~~r~~l~~~L~~~~~~~~gv~--i~~~~~v~~i~~~~-~~v~g~v~~~~g~----~~~ 154 (399)
T 2x3n_A 85 ELLRYFNYSSV---DARGYFILMPCESLRRLVLEKIDGEATVE--MLFETRIEAVQRDE-RHAIDQVRLNDGR----VLR 154 (399)
T ss_dssp EEEEEEETTSS---CGGGCEEECCHHHHHHHHHHHHTTCTTEE--EECSCCEEEEEECT-TSCEEEEEETTSC----EEE
T ss_pred CEEEecchHHh---cccCccccccHHHHHHHHHHHhhhcCCcE--EEcCCEEEEEEEcC-CceEEEEEECCCC----EEE
Confidence 00000110000 0000112246688999999988877 888 99999999999876 567 78876654 799
Q ss_pred eCEEEEccCCCCC
Q 024975 155 FDAVVVCNGHFSV 167 (259)
Q Consensus 155 ad~VIlAtG~~s~ 167 (259)
+|.||+|+|.+|.
T Consensus 155 ad~vV~AdG~~s~ 167 (399)
T 2x3n_A 155 PRVVVGADGIASY 167 (399)
T ss_dssp EEEEEECCCTTCH
T ss_pred CCEEEECCCCChH
Confidence 9999999998764
No 125
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.47 E-value=1.1e-13 Score=117.75 Aligned_cols=164 Identities=19% Similarity=0.203 Sum_probs=92.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCC-------CCCCCCC------------Ccc
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPL-------GVDPNRY------------PVH 62 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~-------~~~~~~~------------~~~ 62 (259)
.+||+|||+|++|+++|..|+++|.+|+|+||.+.+||............. +...... ...
T Consensus 121 ~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~~~ 200 (566)
T 1qo8_A 121 TTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQND 200 (566)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCC
Confidence 369999999999999999999999999999999888765433211110000 0000000 000
Q ss_pred ccccccceecccccccee--cCCCCCccCC-CCCCCCC------CCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEE
Q 024975 63 SSLYKSLRVNLPRELMGF--QAYPFVARNY-EGSVDLR------RYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARL 133 (259)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~------~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~ 133 (259)
......+....+.....+ ...++..... ....... .......+...|.+.+.+.+++ ++++++|+++..
T Consensus 201 ~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~--i~~~~~v~~l~~ 278 (566)
T 1qo8_A 201 IKLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGID--TRLNSRVVKLVV 278 (566)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTCC--EECSEEEEEEEE
T ss_pred HHHHHHHHhccHHHHHHHHhcCCccccccccCCCCCCceeecCCCCCCHHHHHHHHHHHHHhcCCE--EEeCCEEEEEEE
Confidence 000000000000000000 0011100000 0000000 0122467888999999889999 999999999988
Q ss_pred eC-CCcEEEEEEecCCceEEEEeCEEEEccCCCCC
Q 024975 134 VE-SNKWKVKSRKKDDVVEEETFDAVVVCNGHFSV 167 (259)
Q Consensus 134 ~~-~~~~~v~~~~g~~~~~~~~ad~VIlAtG~~s~ 167 (259)
++ +..+.|.+.+.+++...+.+|.||+|||.++.
T Consensus 279 ~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 279 NDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGM 313 (566)
T ss_dssp CTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTT
T ss_pred CCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCccc
Confidence 75 34445666643444457899999999998765
No 126
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.47 E-value=7.5e-14 Score=113.99 Aligned_cols=146 Identities=21% Similarity=0.235 Sum_probs=85.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcC-----ceeeeCCCCCCCCCCCCCCCCCccc-cccccceecc-c
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVG-----GSWIYTSETESDPLGVDPNRYPVHS-SLYKSLRVNL-P 74 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~g-----g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~ 74 (259)
.+||+|||||++|+++|..|++.|++|+|+|+.+.++ +.+...+... ...+.. ..++.+.... +
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~---------~~~l~~~gl~~~~~~~~~~ 96 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSG---------QEAMKKAGLLQTYYDLALP 96 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTH---------HHHHHHTTCHHHHHHHCBC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccH---------HHHHHhcChHHHHHHhhcc
Confidence 3699999999999999999999999999999986543 2222111000 000000 0000000000 0
Q ss_pred -------cccceecCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecC
Q 024975 75 -------RELMGFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKD 147 (259)
Q Consensus 75 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~ 147 (259)
.....+....+... .........+..+.++|.+.+. +.+ ++++++|++++..+ +.|.|.+.++.
T Consensus 97 ~~~~~~~~~g~~~~~~~~~~~----~~~~~~~i~r~~l~~~L~~~~~--~~~--i~~~~~v~~i~~~~-~~v~v~~~~g~ 167 (398)
T 2xdo_A 97 MGVNIADEKGNILSTKNVKPE----NRFDNPEINRNDLRAILLNSLE--NDT--VIWDRKLVMLEPGK-KKWTLTFENKP 167 (398)
T ss_dssp CCEEEECSSSEEEEECCCGGG----TTSSCCEECHHHHHHHHHHTSC--TTS--EEESCCEEEEEECS-SSEEEEETTSC
T ss_pred cceEEECCCCCchhhcccccc----CCCCCceECHHHHHHHHHhhcC--CCE--EEECCEEEEEEECC-CEEEEEECCCc
Confidence 00000000000000 0011122456777777776653 255 89999999999876 67888887764
Q ss_pred CceEEEEeCEEEEccCCCCCCc
Q 024975 148 DVVEEETFDAVVVCNGHFSVPR 169 (259)
Q Consensus 148 ~~~~~~~ad~VIlAtG~~s~~~ 169 (259)
.+.+|.||.|+|.+|..+
T Consensus 168 ----~~~ad~vV~AdG~~S~vR 185 (398)
T 2xdo_A 168 ----SETADLVILANGGMSKVR 185 (398)
T ss_dssp ----CEEESEEEECSCTTCSCC
T ss_pred ----EEecCEEEECCCcchhHH
Confidence 689999999999877544
No 127
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.45 E-value=4.2e-14 Score=119.51 Aligned_cols=185 Identities=15% Similarity=0.122 Sum_probs=107.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC-CcCceeeeCCCCCCCCCCCCCCCCCcc-ccccccceecc------
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE-QVGGSWIYTSETESDPLGVDPNRYPVH-SSLYKSLRVNL------ 73 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~------ 73 (259)
.+||+|||||++|++||..|++.|.+|+|+|++. .+|.. .|.+...... ......+....
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~------------~Cnps~GGia~g~lv~eldalgg~~~~~ 94 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQM------------SCNPAIGGIAKGIVVREIDALGGEMGKA 94 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCC------------CSCSEEECTTHHHHHHHHHHHTCSHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCc------------CccccccccchHHHHHHHHHhhhHHHHH
Confidence 3799999999999999999999999999999974 34321 1111000000 00000000000
Q ss_pred -ccccceecCCCCCccCCCCCCC-CCCCCCHHHHHHHHHHHHHH-hCCceeEEeceeEEEEEEeCCCcEEEEEEecCCce
Q 024975 74 -PRELMGFQAYPFVARNYEGSVD-LRRYPGHEEVLRYLQNFARE-FGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVV 150 (259)
Q Consensus 74 -~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~-~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~ 150 (259)
......+..... . .....+ ......+..+...+.+.+.+ .+++ + ++++|+++...++..+.|.+.+|.
T Consensus 95 ~d~~gi~f~~l~~--~-kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVe--I-~~~~Vt~L~~e~g~V~GV~t~dG~--- 165 (637)
T 2zxi_A 95 IDQTGIQFKMLNT--R-KGKAVQSPRAQADKKRYREYMKKVCENQENLY--I-KQEEVVDIIVKNNQVVGVRTNLGV--- 165 (637)
T ss_dssp HHHHEEEEEEEST--T-SCGGGCEEEEEECHHHHHHHHHHHHHTCTTEE--E-EESCEEEEEESSSBEEEEEETTSC---
T ss_pred hhhcccceeeccc--c-cCccccchhhhCCHHHHHHHHHHHHHhCCCCE--E-EEeEEEEEEecCCEEEEEEECCCc---
Confidence 000000100000 0 000000 00012346788888888877 4887 6 678999998765344557776654
Q ss_pred EEEEeCEEEEccCCCCCCccCCCCCCCCCCCceEEcccCCCCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 151 EEETFDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 151 ~~~~ad~VIlAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
.+.||.||+|||. .+..+.++|...+ . ..+ + |+.++.+++..|.+.|.++..+.+..
T Consensus 166 -~i~AdaVVLATG~--~s~~~~~~G~~~~------~----------~Gr---~-G~~~A~~la~~L~~lG~~v~~l~tgt 222 (637)
T 2zxi_A 166 -EYKTKAVVVTTGT--FLNGVIYIGDKMI------P----------GGR---L-GEPRSEGLSDFYRRFDFPLIRFKTGT 222 (637)
T ss_dssp -EEECSEEEECCTT--CBTCEEEETTEEE------E----------CSB---T-TBCCBCTHHHHHHHTTCCCEEEEEEE
T ss_pred -EEEeCEEEEccCC--CccCceeccceec------C----------CCC---C-CchhHHHHHHHHHhcCCceEEecCCc
Confidence 7999999999995 4444445554321 0 111 2 35788999999999998887776643
No 128
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.44 E-value=1e-12 Score=106.56 Aligned_cols=146 Identities=21% Similarity=0.164 Sum_probs=86.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCc---eeeeCCCCC--CCCCCCCCCCCCccccccccceeccccc
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGG---SWIYTSETE--SDPLGVDPNRYPVHSSLYKSLRVNLPRE 76 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg---~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (259)
.+||+|||||++|+++|..|.+.|++|+|+|+.+.++. .....+... ...++.... ..........+.....
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~-~~~~~~~~~~~~~~~~-- 87 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDD-VLQGSHTPPTYETWMH-- 87 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHH-HHTTCBCCSCEEEEET--
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHH-HHhhCCCccceEEEeC--
Confidence 37999999999999999999999999999999876642 111100000 000000000 0000000000000000
Q ss_pred cceecCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeC
Q 024975 77 LMGFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFD 156 (259)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad 156 (259)
...+..++.. ........+..+.++|.+.+.+.+++ ++++++|++++. + + .|.+.++. .+.+|
T Consensus 88 g~~~~~~~~~-------~~~~~~~~r~~l~~~L~~~~~~~gv~--i~~~~~v~~i~~-~-~--~v~~~~g~----~~~ad 150 (379)
T 3alj_A 88 NKSVSKETFN-------GLPWRIMTRSHLHDALVNRARALGVD--ISVNSEAVAADP-V-G--RLTLQTGE----VLEAD 150 (379)
T ss_dssp TEEEEEECGG-------GCCEEEEEHHHHHHHHHHHHHHTTCE--EESSCCEEEEET-T-T--EEEETTSC----EEECS
T ss_pred CceeeeccCC-------CCceEEECHHHHHHHHHHHHHhcCCE--EEeCCEEEEEEe-C-C--EEEECCCC----EEEcC
Confidence 0000000000 01122345688999999999888998 999999999986 3 4 77776654 79999
Q ss_pred EEEEccCCCCC
Q 024975 157 AVVVCNGHFSV 167 (259)
Q Consensus 157 ~VIlAtG~~s~ 167 (259)
.||+|+|.+|.
T Consensus 151 ~vV~AdG~~s~ 161 (379)
T 3alj_A 151 LIVGADGVGSK 161 (379)
T ss_dssp EEEECCCTTCH
T ss_pred EEEECCCccHH
Confidence 99999997664
No 129
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.43 E-value=5e-13 Score=110.45 Aligned_cols=61 Identities=18% Similarity=0.140 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHhCCceeEEece---eEEEEEEeCCCcEE-EEEEecCCceEEEEeCEEEEccCCCCCCcc
Q 024975 103 EEVLRYLQNFAREFGVDQVVRLHT---EVLNARLVESNKWK-VKSRKKDDVVEEETFDAVVVCNGHFSVPRL 170 (259)
Q Consensus 103 ~~~~~~l~~~~~~~~~~~~v~~~~---~v~~i~~~~~~~~~-v~~~~g~~~~~~~~ad~VIlAtG~~s~~~~ 170 (259)
..+...|.+.+.+.|++ +++++ +|++|...+ +.+. |.+.++. .+.||.||+|+|.++....
T Consensus 161 ~~~~~~L~~~a~~~Gv~--i~~~t~~~~V~~i~~~~-~~v~gV~t~~G~----~i~Ad~VV~AtG~~s~~l~ 225 (438)
T 3dje_A 161 RNALVAAAREAQRMGVK--FVTGTPQGRVVTLIFEN-NDVKGAVTADGK----IWRAERTFLCAGASAGQFL 225 (438)
T ss_dssp HHHHHHHHHHHHHTTCE--EEESTTTTCEEEEEEET-TEEEEEEETTTE----EEECSEEEECCGGGGGGTS
T ss_pred HHHHHHHHHHHHhcCCE--EEeCCcCceEEEEEecC-CeEEEEEECCCC----EEECCEEEECCCCChhhhc
Confidence 67888888989889999 99999 999999876 5666 7777653 7999999999998765443
No 130
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.43 E-value=9.2e-13 Score=110.82 Aligned_cols=60 Identities=15% Similarity=0.163 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHhCCceeEEeceeEEEEEEe-CCCcEEEEEEecCCceEEEEeC-EEEEccCCCC
Q 024975 104 EVLRYLQNFAREFGVDQVVRLHTEVLNARLV-ESNKWKVKSRKKDDVVEEETFD-AVVVCNGHFS 166 (259)
Q Consensus 104 ~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~-~~~~~~v~~~~g~~~~~~~~ad-~VIlAtG~~s 166 (259)
.+...|.+.+++.+++ ++++++|++|..+ ++....|.+.++ ++...+.|+ .||+|||.++
T Consensus 203 ~l~~~L~~~~~~~Gv~--i~~~t~v~~L~~~~~g~v~GV~~~~~-g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 203 MLMKPLVETAEKLGVR--AEYDMRVQTLVTDDTGRVVGIVAKQY-GKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHTTCE--EECSEEEEEEEECTTCCEEEEEEEET-TEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCE--EEecCEeEEEEECCCCcEEEEEEEEC-CcEEEEEeCCeEEEeCCChh
Confidence 7888899988888999 9999999999987 334445666653 344578995 9999999876
No 131
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.42 E-value=1.9e-12 Score=109.97 Aligned_cols=63 Identities=13% Similarity=0.006 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEec-CCceEEEEeCEEEEccCCCC
Q 024975 102 HEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKK-DDVVEEETFDAVVVCNGHFS 166 (259)
Q Consensus 102 ~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g-~~~~~~~~ad~VIlAtG~~s 166 (259)
...+...+...+.+.|++ ++.+++|+++...+++.+.|.+.+. +++...+.||.||+|+|.|+
T Consensus 169 ~~~l~~~L~~~a~~~G~~--i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 169 DARLTLEIMKEAVARGAV--ALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp HHHHHHHHHHHHHHTTCE--EEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCE--EEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 367778888888889999 9999999999987644467887763 24446799999999999876
No 132
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.41 E-value=7.1e-13 Score=107.55 Aligned_cols=59 Identities=22% Similarity=0.178 Sum_probs=47.8
Q ss_pred CHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEccCCCCC
Q 024975 101 GHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVCNGHFSV 167 (259)
Q Consensus 101 ~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlAtG~~s~ 167 (259)
....+...+.+.+.+.|++ ++.+++|+++...+ +.|.|.+.++ .+.+|.||+|+|.++.
T Consensus 162 ~~~~~~~~l~~~~~~~g~~--i~~~~~v~~i~~~~-~~~~v~~~~g-----~~~a~~vV~A~G~~s~ 220 (382)
T 1ryi_A 162 EPYFVCKAYVKAAKMLGAE--IFEHTPVLHVERDG-EALFIKTPSG-----DVWANHVVVASGVWSG 220 (382)
T ss_dssp CHHHHHHHHHHHHHHTTCE--EETTCCCCEEECSS-SSEEEEETTE-----EEEEEEEEECCGGGTH
T ss_pred cHHHHHHHHHHHHHHCCCE--EEcCCcEEEEEEEC-CEEEEEcCCc-----eEEcCEEEECCChhHH
Confidence 3477888899988888998 99999999998765 6676665432 6899999999998654
No 133
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.41 E-value=4e-12 Score=107.80 Aligned_cols=160 Identities=11% Similarity=0.035 Sum_probs=86.9
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceee---eCCCCC--CCCCCCCCC--CCCccccccccceecccc
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWI---YTSETE--SDPLGVDPN--RYPVHSSLYKSLRVNLPR 75 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~---~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 75 (259)
+||+||||||+|+++|..|+++|++|+|+|+.+.++.... ..+... ....+.... ..................
T Consensus 27 ~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 106 (549)
T 2r0c_A 27 TDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAWVTRV 106 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEEESSB
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEEeccC
Confidence 6999999999999999999999999999999876532110 000000 000000000 000000000000000000
Q ss_pred ccceecCCCCCccCC--C--CCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEec-CCce
Q 024975 76 ELMGFQAYPFVARNY--E--GSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKK-DDVV 150 (259)
Q Consensus 76 ~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g-~~~~ 150 (259)
....+..+++..... . .........++..+.++|.+.+.+. ++++++|++++.++ +.+++.+.+. +++.
T Consensus 107 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~-----v~~~~~v~~~~~~~-~~v~v~~~~~~~G~~ 180 (549)
T 2r0c_A 107 GGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER-----LRTRSRLDSFEQRD-DHVRATITDLRTGAT 180 (549)
T ss_dssp TSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG-----EECSEEEEEEEECS-SCEEEEEEETTTCCE
T ss_pred CCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh-----cccCcEEEEEEEeC-CEEEEEEEECCCCCE
Confidence 000000011100000 0 0001112245677888888887664 78899999999876 6788888762 2434
Q ss_pred EEEEeCEEEEccCCCCCC
Q 024975 151 EEETFDAVVVCNGHFSVP 168 (259)
Q Consensus 151 ~~~~ad~VIlAtG~~s~~ 168 (259)
..+++|+||.|+|.+|..
T Consensus 181 ~~i~a~~vVgADG~~S~v 198 (549)
T 2r0c_A 181 RAVHARYLVACDGASSPT 198 (549)
T ss_dssp EEEEEEEEEECCCTTCHH
T ss_pred EEEEeCEEEECCCCCcHH
Confidence 579999999999987753
No 134
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.41 E-value=6.6e-13 Score=108.79 Aligned_cols=159 Identities=18% Similarity=0.132 Sum_probs=88.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCc-EEEEeeCCCcCc---eeeeCCCCC--CCCCCCCCCCCCcc-ccccccceeccc
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHT-VVVYEKGEQVGG---SWIYTSETE--SDPLGVDPNRYPVH-SSLYKSLRVNLP 74 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~-v~v~e~~~~~gg---~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~ 74 (259)
.+||+|||||++|+++|..|++.|++ |+|+|+.+.++. .....+... ...++.... +.. ......+.....
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~--l~~~~~~~~~~~~~~~ 81 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPA--LAATAIPTHELRYIDQ 81 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHH--HHHHSEEECEEEEECT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHH--HHhhCCCcceEEEEcC
Confidence 37999999999999999999999999 999999876531 111110000 000000000 000 000000000000
Q ss_pred cccceecCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHH-hC-CceeEEeceeEEEEEEeCCCcEEEEEEec-CCceE
Q 024975 75 RELMGFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFARE-FG-VDQVVRLHTEVLNARLVESNKWKVKSRKK-DDVVE 151 (259)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~-~~~~v~~~~~v~~i~~~~~~~~~v~~~~g-~~~~~ 151 (259)
. ...+...+.... ...........+..+.++|.+.+.+ .+ ++ ++++++|+++.. + +.+.+.+.+. ++...
T Consensus 82 ~-g~~~~~~~~~~~--~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~--v~~~~~v~~i~~-~-~~v~v~~~~~~~g~~~ 154 (410)
T 3c96_A 82 S-GATVWSEPRGVE--AGNAYPQYSIHRGELQMILLAAVRERLGQQA--VRTGLGVERIEE-R-DGRVLIGARDGHGKPQ 154 (410)
T ss_dssp T-SCEEEEEECGGG--GTCSSCEEEEEHHHHHHHHHHHHHHHHCTTS--EEESEEEEEEEE-E-TTEEEEEEEETTSCEE
T ss_pred C-CCEEeeccCCcc--ccCCCCeeeeeHHHHHHHHHHHHHhhCCCcE--EEECCEEEEEec-C-CccEEEEecCCCCCce
Confidence 0 000000000000 0000111224567888899888876 36 47 999999999988 5 6688887761 12234
Q ss_pred EEEeCEEEEccCCCCCCc
Q 024975 152 EETFDAVVVCNGHFSVPR 169 (259)
Q Consensus 152 ~~~ad~VIlAtG~~s~~~ 169 (259)
.+.+|.||.|+|.+|..+
T Consensus 155 ~~~ad~vV~AdG~~S~vR 172 (410)
T 3c96_A 155 ALGADVLVGADGIHSAVR 172 (410)
T ss_dssp EEEESEEEECCCTTCHHH
T ss_pred EEecCEEEECCCccchhH
Confidence 789999999999877544
No 135
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.41 E-value=1.4e-13 Score=111.99 Aligned_cols=57 Identities=23% Similarity=0.334 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEccCCCCC
Q 024975 103 EEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVCNGHFSV 167 (259)
Q Consensus 103 ~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlAtG~~s~ 167 (259)
..+...+.+.+.+.|++ ++.+++|+++...+ +.|.|.+.+ ..+.+|.||+|+|.++.
T Consensus 150 ~~~~~~l~~~~~~~Gv~--i~~~~~v~~i~~~~-~~~~v~~~~-----g~~~a~~vV~A~G~~~~ 206 (389)
T 2gf3_A 150 ENCIRAYRELAEARGAK--VLTHTRVEDFDISP-DSVKIETAN-----GSYTADKLIVSMGAWNS 206 (389)
T ss_dssp HHHHHHHHHHHHHTTCE--EECSCCEEEEEECS-SCEEEEETT-----EEEEEEEEEECCGGGHH
T ss_pred HHHHHHHHHHHHHCCCE--EEcCcEEEEEEecC-CeEEEEeCC-----CEEEeCEEEEecCccHH
Confidence 67888888888888998 99999999999876 567776643 26899999999998654
No 136
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.41 E-value=1.4e-12 Score=113.56 Aligned_cols=59 Identities=14% Similarity=0.344 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEccCCCCC
Q 024975 103 EEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVCNGHFSV 167 (259)
Q Consensus 103 ~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlAtG~~s~ 167 (259)
..+...+.+.+.+.|++ ++++++|+++...+ +.|.|.+.++. ..+.+|.||+|+|.++.
T Consensus 412 ~~l~~aL~~~a~~~Gv~--i~~~t~V~~l~~~~-~~v~V~t~~G~---~~i~Ad~VVlAtG~~s~ 470 (689)
T 3pvc_A 412 SDLTHALMMLAQQNGMT--CHYQHELQRLKRID-SQWQLTFGQSQ---AAKHHATVILATGHRLP 470 (689)
T ss_dssp HHHHHHHHHHHHHTTCE--EEESCCEEEEEECS-SSEEEEEC-CC---CCEEESEEEECCGGGTT
T ss_pred HHHHHHHHHHHHhCCCE--EEeCCeEeEEEEeC-CeEEEEeCCCc---EEEECCEEEECCCcchh
Confidence 67888888888888999 99999999999876 66888876642 14899999999998764
No 137
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.41 E-value=2.1e-12 Score=101.75 Aligned_cols=142 Identities=15% Similarity=0.063 Sum_probs=82.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHc--CCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccce
Q 024975 2 FRHVAVIGAGAAGLVVGHELLRE--GHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMG 79 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~--g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (259)
.+||+|||||++|+++|+.|+++ |.+|+|+|+.+.+|+.+... +..............++..
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~--------g~~~~~~~~~~~~~~~L~~-------- 142 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLG--------GQLFSAMVMRKPADVFLDE-------- 142 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCC--------BTTCCCEEEETTTHHHHHH--------
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccC--------CccchhhhcchHHHHHHHH--------
Confidence 47999999999999999999997 99999999998877543211 1111100000000001000
Q ss_pred ecCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHH-hCCceeEEeceeEEEEEEeCC----------------C---cE
Q 024975 80 FQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFARE-FGVDQVVRLHTEVLNARLVES----------------N---KW 139 (259)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~v~~~~~v~~i~~~~~----------------~---~~ 139 (259)
...++... .......+..++.+.|.+.+.+ .+++ ++.+++|+++...++ + ..
T Consensus 143 -~Gv~~~~~-----G~~~~~~~~~d~~~~L~~~a~~~~gV~--i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~ 214 (344)
T 3jsk_A 143 -VGVPYEDE-----GDYVVVKHAALFTSTVLSKVLQRPNVK--LFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIA 214 (344)
T ss_dssp -HTCCCEEC-----SSEEEESCHHHHHHHHHHHHHTCTTEE--EEETEEEEEEEEEEC----------------CCEEEE
T ss_pred -cCCccccc-----CCeEEEecHHHHHHHHHHHHHhCCCCE--EEeCCEEEEEEecCCcccccccccccccccCCCceEe
Confidence 00111100 0000011236667777777766 4888 999999999987641 1 11
Q ss_pred EEEEE------ecC----CceEEEEeCEEEEccCCCCC
Q 024975 140 KVKSR------KKD----DVVEEETFDAVVVCNGHFSV 167 (259)
Q Consensus 140 ~v~~~------~g~----~~~~~~~ad~VIlAtG~~s~ 167 (259)
.|.+. ++. .....+.+++||+|||+.+.
T Consensus 215 GVv~~~~~v~~~g~~~~~~d~~~i~Ak~VV~ATG~~s~ 252 (344)
T 3jsk_A 215 GVVTNWTLVSMHHDDQSAMDPNTINAPVIISTTGHDGP 252 (344)
T ss_dssp EEEEEEHHHHTTSSSSSCCBCEEEECSEEEECCCSSSS
T ss_pred EEEeeeeeeeccCCcccccCceEEEcCEEEECCCCCch
Confidence 23222 111 12357999999999997553
No 138
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.40 E-value=6.4e-13 Score=107.72 Aligned_cols=58 Identities=17% Similarity=0.189 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEccCCCCC
Q 024975 102 HEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVCNGHFSV 167 (259)
Q Consensus 102 ~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlAtG~~s~ 167 (259)
...+...|.+.+++.|++ ++++++|+++...+ +.|.|.+.++ .+.||.||+|+|.++.
T Consensus 153 ~~~~~~~l~~~a~~~Gv~--i~~~~~V~~i~~~~-~~~~V~t~~g-----~i~a~~VV~A~G~~s~ 210 (381)
T 3nyc_A 153 TDALHQGYLRGIRRNQGQ--VLCNHEALEIRRVD-GAWEVRCDAG-----SYRAAVLVNAAGAWCD 210 (381)
T ss_dssp HHHHHHHHHHHHHHTTCE--EESSCCCCEEEEET-TEEEEECSSE-----EEEESEEEECCGGGHH
T ss_pred HHHHHHHHHHHHHHCCCE--EEcCCEEEEEEEeC-CeEEEEeCCC-----EEEcCEEEECCChhHH
Confidence 367888888888889999 99999999999876 5688777653 6999999999998763
No 139
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.39 E-value=2e-12 Score=105.82 Aligned_cols=152 Identities=17% Similarity=0.165 Sum_probs=80.4
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcC-----ceeeeCCCCCCCCCCCCCCCCCccccccccceeccc--c
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVG-----GSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLP--R 75 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~g-----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 75 (259)
.+|+||||||+|+++|..|+++|++|+||||.+.+. ......++.. ..-..+.....+..+..... .
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~------~~L~~lg~~~~~~~~~~~~~~~~ 75 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGK------QALQECLPAENWLAFEEASRYIG 75 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHH------HHHHHHSCHHHHHHHHHHCEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHH------HHHHHcCChHHHHHhhhhhcccC
Confidence 589999999999999999999999999999986542 1111110000 00000000000000000000 0
Q ss_pred ccceecCCCCCccCCC---------CCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEec
Q 024975 76 ELMGFQAYPFVARNYE---------GSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKK 146 (259)
Q Consensus 76 ~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g 146 (259)
....+........... ..........+..+.+.|.+. .+.. +++++++++++..+++.++|.+.+|
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~---~~~~--v~~~~~v~~~~~~~~~~v~v~~~dG 150 (412)
T 4hb9_A 76 GQSRFYNERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKG---LANT--IQWNKTFVRYEHIENGGIKIFFADG 150 (412)
T ss_dssp CCCEEECTTSCEEEC--------------CEEEEEHHHHHHHHHTT---CTTT--EECSCCEEEEEECTTSCEEEEETTS
T ss_pred cceeEecCCcceecccCCccccccccccccceEeeHHHHHHHHHhh---ccce--EEEEEEEEeeeEcCCCeEEEEECCC
Confidence 0000000000000000 000000012234444444332 2445 9999999999987656788998887
Q ss_pred CCceEEEEeCEEEEccCCCCCCc
Q 024975 147 DDVVEEETFDAVVVCNGHFSVPR 169 (259)
Q Consensus 147 ~~~~~~~~ad~VIlAtG~~s~~~ 169 (259)
. ++++|+||.|.|..|..+
T Consensus 151 ~----~~~adlvVgADG~~S~vR 169 (412)
T 4hb9_A 151 S----HENVDVLVGADGSNSKVR 169 (412)
T ss_dssp C----EEEESEEEECCCTTCHHH
T ss_pred C----EEEeeEEEECCCCCcchH
Confidence 6 799999999999877543
No 140
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.38 E-value=5.9e-12 Score=107.22 Aligned_cols=162 Identities=22% Similarity=0.219 Sum_probs=91.6
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCC-------CCCCCCCCc------------cc
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPL-------GVDPNRYPV------------HS 63 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~-------~~~~~~~~~------------~~ 63 (259)
+||+|||+|++|+++|..|.+.|.+|+|+|+.+.+||............. +.......+ ..
T Consensus 127 ~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~~ 206 (572)
T 1d4d_A 127 TDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNINDP 206 (572)
T ss_dssp CSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTCSCH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCCH
Confidence 68999999999999999999999999999999888765433221110000 000000000 00
Q ss_pred cccccceecccccccee---cCCCCCccCC-CCCCCCCC------CCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEE
Q 024975 64 SLYKSLRVNLPRELMGF---QAYPFVARNY-EGSVDLRR------YPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARL 133 (259)
Q Consensus 64 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~------~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~ 133 (259)
.....+....+. ...+ ...++..... ........ ......+...|.+.+.+.+++ ++++++|++|..
T Consensus 207 ~~v~~~~~~~~~-~i~~l~~~Gv~~~~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~gv~--i~~~t~v~~l~~ 283 (572)
T 1d4d_A 207 ELVKVLANNSSD-SIDWLTSMGADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGTD--IRLNSRVVRILE 283 (572)
T ss_dssp HHHHHHHHTHHH-HHHHHHHHTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCE--EESSEEEEEEEE
T ss_pred HHHHHHHHccHH-HHHHHHhcCCccccccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHHHcCCe--EEecCEEEEEEE
Confidence 000000000000 0000 0111110000 00000000 012467888899999889999 999999999987
Q ss_pred eC-CCcEEEEEEecCCceEEEEeCEEEEccCCCCC
Q 024975 134 VE-SNKWKVKSRKKDDVVEEETFDAVVVCNGHFSV 167 (259)
Q Consensus 134 ~~-~~~~~v~~~~g~~~~~~~~ad~VIlAtG~~s~ 167 (259)
++ +..+.|.+.+.+++...+.+|.||+|||.++.
T Consensus 284 ~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~ 318 (572)
T 1d4d_A 284 DASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAK 318 (572)
T ss_dssp C--CCEEEEEEEETTTEEEEEECSEEEECCCCCTT
T ss_pred CCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCcc
Confidence 65 34455766653444557899999999997664
No 141
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.38 E-value=3.2e-13 Score=112.38 Aligned_cols=215 Identities=19% Similarity=0.187 Sum_probs=102.6
Q ss_pred eEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCC--CCCCCC----------Ccccccccccee
Q 024975 4 HVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLG--VDPNRY----------PVHSSLYKSLRV 71 (259)
Q Consensus 4 ~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~--~~~~~~----------~~~~~~~~~~~~ 71 (259)
||+|||+|++|+++|..|++.|.+|+|+||. ..+|.............. ..+... +........+..
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~~ 79 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTS 79 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHHH
Confidence 7999999999999999999999999999998 444432221111000000 000000 000000000000
Q ss_pred ccccccceec--CCCCCccCCCCCC---CCCCC---CCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEE
Q 024975 72 NLPRELMGFQ--AYPFVARNYEGSV---DLRRY---PGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKS 143 (259)
Q Consensus 72 ~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~---~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~ 143 (259)
..+.....+. ..++......... ....+ .....+...|.+.+.+.+++ ++.+++| ++...++....+..
T Consensus 80 ~~~~~i~~l~~~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~--i~~~~~v-~l~~~~~~v~Gv~v 156 (472)
T 2e5v_A 80 EAKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGIP--IIEDRLV-EIRVKDGKVTGFVT 156 (472)
T ss_dssp HHHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCC--EECCCEE-EEEEETTEEEEEEE
T ss_pred HHHHHHHHHHHcCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCCE--EEECcEE-EEEEeCCEEEEEEE
Confidence 0000000000 1111110000000 00001 12356777787777778999 9999999 99876522223444
Q ss_pred EecCCceEEEEeCEEEEccCCCCCCccCCCC-CCCCCCCceEEcc-----cCCCCCCCCC-CeEEEEccCcCHHHHHHHH
Q 024975 144 RKKDDVVEEETFDAVVVCNGHFSVPRLAQVP-GIDSWPGKQMHSH-----NYRIPNPFQD-QVVILIGHYASGLDIKRDL 216 (259)
Q Consensus 144 ~~g~~~~~~~~ad~VIlAtG~~s~~~~~~~~-g~~~~~~~~~~~~-----~~~~~~~~~~-~~v~viG~G~~a~e~a~~l 216 (259)
.+.+ ..+.+|.||+|||.+ +..+... +.....+...... ...+....+. ..++++|+| +++++..+
T Consensus 157 ~~~~---g~~~a~~VVlAtGg~--~~~~~~~~~~~~~tGdgi~~a~~aGa~~~d~e~~q~~p~~~~~ggg--~~~~ae~~ 229 (472)
T 2e5v_A 157 EKRG---LVEDVDKLVLATGGY--SYLYEYSSTQSTNIGDGMAIAFKAGTILADMEFVQFHPTVTSLDGE--VFLLTETL 229 (472)
T ss_dssp TTTE---EECCCSEEEECCCCC--GGGSSSBSSCTTCSCHHHHHHHHTTCCEECTTCEEEEEEEECGGGC--CEECCTHH
T ss_pred EeCC---CeEEeeeEEECCCCC--cccCccccCCCCCchHHHHHHHHcCCCEeCCcceEEEeEEEccCCC--ceeeehhh
Confidence 3211 246799999999954 4443322 1112222211000 0111111111 234455766 77777777
Q ss_pred hcccCeEEEEecCC
Q 024975 217 AGFAKEVHIASRSV 230 (259)
Q Consensus 217 ~~~~~~v~~~~r~~ 230 (259)
...|..+ +..+.+
T Consensus 230 ~~~G~~~-v~~~g~ 242 (472)
T 2e5v_A 230 RGEGAQI-INENGE 242 (472)
T ss_dssp HHTTCEE-EETTCC
T ss_pred cCCceEE-ECCCCC
Confidence 7777655 555544
No 142
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.38 E-value=3.3e-12 Score=110.13 Aligned_cols=160 Identities=14% Similarity=0.082 Sum_probs=90.0
Q ss_pred CeEEEECCChHHHHHHHHHHH-cCCcEEEEeeCCCcCcee---eeCCCCC--CCCCCCCCCCCCcc-ccccccceeccc-
Q 024975 3 RHVAVIGAGAAGLVVGHELLR-EGHTVVVYEKGEQVGGSW---IYTSETE--SDPLGVDPNRYPVH-SSLYKSLRVNLP- 74 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~-~g~~v~v~e~~~~~gg~~---~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~- 74 (259)
+||+||||||+|+++|..|++ .|++|+|+|+.+.++... ...+... ...++.... +.. ......+.....
T Consensus 33 ~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~--~~~~~~~~~~~~~~~~~ 110 (639)
T 2dkh_A 33 VDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADS--ILKEACWINDVTFWKPD 110 (639)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHH--HHHHSEEECEEEEEEEC
T ss_pred CcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHH--HHHhcccccceEEECCC
Confidence 689999999999999999999 999999999986553110 0000000 000000000 000 000000000000
Q ss_pred ----cccceecCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC--ceeEEeceeEEEEEEeCC---CcEEEEEEe
Q 024975 75 ----RELMGFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGV--DQVVRLHTEVLNARLVES---NKWKVKSRK 145 (259)
Q Consensus 75 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~v~~~~~v~~i~~~~~---~~~~v~~~~ 145 (259)
........++.... ..........++..+.++|.+.+.+.++ + ++++++|++++.+++ ..+.+.+.+
T Consensus 111 ~~~~g~~~~~~~~~~~~~--~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~--v~~~~~v~~l~~~~~~~~~~v~v~~~~ 186 (639)
T 2dkh_A 111 PGQPGRIARHGRVQDTED--GLSEFPHVILNQARVHDHYLERMRNSPSRLE--PHYARRVLDVKVDHGAADYPVTVTLER 186 (639)
T ss_dssp TTSTTCEEEEEEEESSCT--TSCSSCEEECCHHHHHHHHHHHHHHSTTCCC--CBCSEEEEEEEECTTCSSCCEEEEEEE
T ss_pred CCCCcceEeecccCcccC--CCCCCceEeeCHHHHHHHHHHHHHhCCCCcE--EecCCEEEEEEECCCCCcCCEEEEEEe
Confidence 00000000000000 0001111234567899999999988876 7 999999999998652 258888775
Q ss_pred ----cCCceEEEEeCEEEEccCCCCCC
Q 024975 146 ----KDDVVEEETFDAVVVCNGHFSVP 168 (259)
Q Consensus 146 ----g~~~~~~~~ad~VIlAtG~~s~~ 168 (259)
.++....+++|+||.|+|.+|..
T Consensus 187 ~~~~~~G~~~~i~a~~vVgADG~~S~v 213 (639)
T 2dkh_A 187 CDAAHAGQIETVQARYVVGCDGARSNV 213 (639)
T ss_dssp CSGGGTTCEEEEEEEEEEECCCTTCHH
T ss_pred ccccCCCCeEEEEeCEEEECCCcchHH
Confidence 23444579999999999987753
No 143
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.37 E-value=3.4e-12 Score=103.55 Aligned_cols=57 Identities=25% Similarity=0.181 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEE-EEEEecCCceEEEEeCEEEEccCCCC
Q 024975 102 HEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWK-VKSRKKDDVVEEETFDAVVVCNGHFS 166 (259)
Q Consensus 102 ~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~-v~~~~g~~~~~~~~ad~VIlAtG~~s 166 (259)
...+...+.+.+.+.|++ ++.+++|+++...+ +.+. |.+.++ .+.+|.||+|+|.++
T Consensus 148 ~~~l~~~l~~~~~~~Gv~--i~~~~~v~~i~~~~-~~v~gv~~~~g-----~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 148 PFEATTAFAVKAKEYGAK--LLEYTEVKGFLIEN-NEIKGVKTNKG-----IIKTGIVVNATNAWA 205 (382)
T ss_dssp HHHHHHHHHHHHHHTTCE--EECSCCEEEEEESS-SBEEEEEETTE-----EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCE--EECCceEEEEEEEC-CEEEEEEECCc-----EEECCEEEECcchhH
Confidence 467888888888888998 99999999999876 5666 766442 689999999999865
No 144
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.36 E-value=5.6e-13 Score=109.00 Aligned_cols=57 Identities=21% Similarity=0.144 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEccCCCC
Q 024975 103 EEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVCNGHFS 166 (259)
Q Consensus 103 ~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlAtG~~s 166 (259)
..+...+.+.+.+.|++ ++++++|+++...++..+.|.+.++ .+.+|.||+|+|.++
T Consensus 174 ~~~~~~l~~~~~~~g~~--i~~~~~v~~i~~~~~~~~~v~~~~g-----~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 174 DHVAWAFARKANEMGVD--IIQNCEVTGFIKDGEKVTGVKTTRG-----TIHAGKVALAGAGHS 230 (405)
T ss_dssp HHHHHHHHHHHHHTTCE--EECSCCEEEEEESSSBEEEEEETTC-----CEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCE--EEcCCeEEEEEEeCCEEEEEEeCCc-----eEECCEEEECCchhH
Confidence 57888888888888998 9999999999987534466776543 589999999999765
No 145
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=99.36 E-value=6.6e-12 Score=108.58 Aligned_cols=163 Identities=17% Similarity=0.117 Sum_probs=90.2
Q ss_pred CCeEEEECCChHHHHHHHHHHH-----cCCcEEEEeeCCCcCc---eeeeCCCCC--CCCCCCCCCCCCcccccccccee
Q 024975 2 FRHVAVIGAGAAGLVVGHELLR-----EGHTVVVYEKGEQVGG---SWIYTSETE--SDPLGVDPNRYPVHSSLYKSLRV 71 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~-----~g~~v~v~e~~~~~gg---~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 71 (259)
.+||+||||||+||++|..|++ .|++|+|+|+.+.+.. .....++.. ...+++.... .........+..
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~gra~~l~~~tle~l~~lGl~~~l-~~~~~~~~~~~~ 86 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQCRTLESLKNLGLADKI-LSEANDMSTIAL 86 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEECHHHHHHHHTTTCHHHH-HTTCBCCCEEEE
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCCceeEEChHHHHHHHHCCCHHHH-HHhccccceEEE
Confidence 3699999999999999999999 9999999999764320 000000000 0000000000 000000000000
Q ss_pred ccccc--cce-ecCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhC---CceeEEeceeEEEEEEeC-------CCc
Q 024975 72 NLPRE--LMG-FQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFG---VDQVVRLHTEVLNARLVE-------SNK 138 (259)
Q Consensus 72 ~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~v~~~~~v~~i~~~~-------~~~ 138 (259)
..+.. ... ...++.... ..........++..+.++|.+.+.+.+ ++ ++++++++++..++ +..
T Consensus 87 ~~~~~~g~i~~~~~~~~~~~--~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~--v~~g~~v~~~~~d~~~~~~~~~~~ 162 (665)
T 1pn0_A 87 YNPDENGHIRRTDRIPDTLP--GISRYHQVVLHQGRIERRILDSIAEISDTRIK--VERPLIPEKMEIDSSKAEDPEAYP 162 (665)
T ss_dssp EEECTTSCEEEEEEEESSCT--TSCSSCCEECCHHHHHHHHHHHHHHHHTTSSC--EECSEEEEEEEECGGGTTCTTCCC
T ss_pred EeCCCCcceEeecccCcccC--CCCCCeeEEeeHHHHHHHHHHHHHhcCCCceE--EEeCCEEEEEEecCcccccCCCCC
Confidence 00000 000 000000000 000111222566888899999888876 78 99999999998864 235
Q ss_pred EEEEEEec----------------------------------------CCceEEEEeCEEEEccCCCCCCc
Q 024975 139 WKVKSRKK----------------------------------------DDVVEEETFDAVVVCNGHFSVPR 169 (259)
Q Consensus 139 ~~v~~~~g----------------------------------------~~~~~~~~ad~VIlAtG~~s~~~ 169 (259)
+++.+.+. ++....+++|+||.|+|..|..+
T Consensus 163 V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S~VR 233 (665)
T 1pn0_A 163 VTMTLRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHSWVR 233 (665)
T ss_dssp EEEEEEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTCHHH
T ss_pred EEEEEEecccccccccccccccccccccccccccccccccccccccCCCCceEEEEeCEEEeccCCCCHHH
Confidence 77777652 34446799999999999877543
No 146
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.36 E-value=7.9e-13 Score=112.17 Aligned_cols=184 Identities=16% Similarity=0.168 Sum_probs=102.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC-CcCceeeeCCCCCCCCCCCCCCCCCcc-ccccccceecc------
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE-QVGGSWIYTSETESDPLGVDPNRYPVH-SSLYKSLRVNL------ 73 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~------ 73 (259)
.+||+|||||++|+++|..|++.|.+|+|+|+.. .+|+.+ |.+...... ......+....
T Consensus 21 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~------------c~ps~gGia~~~lv~el~al~g~~~~~ 88 (641)
T 3cp8_A 21 MYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMS------------CNPAIGGVAKGQITREIDALGGEMGKA 88 (641)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCS------------SCSEEECHHHHHHHHHHHHHTCSHHHH
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCc------------cccchhhhhHHHHHHHHHhcccHHHHH
Confidence 4899999999999999999999999999999974 343311 111000000 00000000000
Q ss_pred -ccccceecCCCCCccCCCCCC-CCCCCCCHHHHHHHHHHHHHHh-CCceeEEeceeEEEEEEeCCCcEE-EEEEecCCc
Q 024975 74 -PRELMGFQAYPFVARNYEGSV-DLRRYPGHEEVLRYLQNFAREF-GVDQVVRLHTEVLNARLVESNKWK-VKSRKKDDV 149 (259)
Q Consensus 74 -~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~-~~~~~v~~~~~v~~i~~~~~~~~~-v~~~~g~~~ 149 (259)
......|.... ....... .......+..+...+.+.+.+. +++ + ++.+|+++...+ +.+. |.+.+|.
T Consensus 89 ~d~~gi~f~~l~---~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~--I-~~~~V~~L~~d~-g~V~GV~t~~G~-- 159 (641)
T 3cp8_A 89 IDATGIQFRMLN---RSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNID--L-LQDTVIGVSANS-GKFSSVTVRSGR-- 159 (641)
T ss_dssp HHHHEEEEEEEC---SSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEE--E-EECCEEEEEEET-TEEEEEEETTSC--
T ss_pred HHhcCCchhhcc---cccCccccchhhhcCHHHHHHHHHHHHHhCCCCE--E-EeeEEEEEEecC-CEEEEEEECCCc--
Confidence 00000110000 0000000 0001234467888888888774 777 6 466999988765 4443 6666553
Q ss_pred eEEEEeCEEEEccCCCCCCccCCCCCCCCCCCceEEcccCCCCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecC
Q 024975 150 VEEETFDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRS 229 (259)
Q Consensus 150 ~~~~~ad~VIlAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~ 229 (259)
.+.||.||+|||.++... ...|... .. +.++ + |+.++++++..|.+.|.+|..+...
T Consensus 160 --~i~Ad~VVLATG~~s~~~--i~~G~~~------~~----------~g~~--v-G~~~a~~la~~L~~~G~kv~~l~tG 216 (641)
T 3cp8_A 160 --AIQAKAAILACGTFLNGL--IHIGMDH------FP----------GGRS--T-AEPPVEGLTESLASLGFSFGRLKTG 216 (641)
T ss_dssp --EEEEEEEEECCTTCBTCE--EEETTEE------EE----------CSSS--T-TSCCBCSHHHHHHHTTCCEEEEEEE
T ss_pred --EEEeCEEEECcCCCCCcc--ceeeeee------ec----------cccc--c-CCchhhhhHHHHHhCCceEEeecCC
Confidence 799999999999643322 2222221 10 0111 1 3677889999998888888766543
No 147
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.35 E-value=7.2e-12 Score=105.18 Aligned_cols=63 Identities=14% Similarity=0.110 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEec-CCceEEEEeCEEEEccCCCCC
Q 024975 102 HEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKK-DDVVEEETFDAVVVCNGHFSV 167 (259)
Q Consensus 102 ~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g-~~~~~~~~ad~VIlAtG~~s~ 167 (259)
...+...+.+.+.+.|++ ++.+++|+++...+ +.|.|.+.+. +++...+.+|.||+|+|.|+.
T Consensus 148 ~~~l~~~l~~~a~~~Gv~--i~~~~~V~~l~~~~-~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~ 211 (501)
T 2qcu_A 148 DARLVLANAQMVVRKGGE--VLTRTRATSARREN-GLWIVEAEDIDTGKKYSWQARGLVNATGPWVK 211 (501)
T ss_dssp HHHHHHHHHHHHHHTTCE--EECSEEEEEEEEET-TEEEEEEEETTTCCEEEEEESCEEECCGGGHH
T ss_pred HHHHHHHHHHHHHHcCCE--EEcCcEEEEEEEeC-CEEEEEEEECCCCCEEEEECCEEEECCChhHH
Confidence 467888888888888999 99999999999876 7788888652 233457999999999998764
No 148
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.35 E-value=7.1e-12 Score=106.87 Aligned_cols=63 Identities=11% Similarity=-0.073 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHhCCceeEEeceeEEEEEEe-CCCcEEEEEEe-cCCceEEEEeCEEEEccCCCCC
Q 024975 103 EEVLRYLQNFAREFGVDQVVRLHTEVLNARLV-ESNKWKVKSRK-KDDVVEEETFDAVVVCNGHFSV 167 (259)
Q Consensus 103 ~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~-~~~~~~v~~~~-g~~~~~~~~ad~VIlAtG~~s~ 167 (259)
..+...|.+.+.+.+++ ++.++.|+++..+ ++..+.|...+ .+++...+.++.||+|||.++.
T Consensus 143 ~~l~~~L~~~~~~~gv~--i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~~ 207 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTT--IFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGR 207 (588)
T ss_dssp HHHHHHHHHHHHHTTCE--EEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCGG
T ss_pred HHHHHHHHHHHHhCCCE--EEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCcc
Confidence 56778888888888999 9999999999985 42345566654 3344567899999999998654
No 149
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.35 E-value=3.3e-12 Score=104.21 Aligned_cols=56 Identities=18% Similarity=0.181 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEccCCCC
Q 024975 103 EEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVCNGHFS 166 (259)
Q Consensus 103 ~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlAtG~~s 166 (259)
..+...+.+.+.+.|++ ++++++|+++...+ +.|.|.+.++ .+.||.||+|+|.++
T Consensus 153 ~~~~~~l~~~a~~~Gv~--i~~~~~V~~i~~~~-~~v~v~t~~g-----~i~a~~VV~A~G~~s 208 (397)
T 2oln_A 153 RGTLAALFTLAQAAGAT--LRAGETVTELVPDA-DGVSVTTDRG-----TYRAGKVVLACGPYT 208 (397)
T ss_dssp HHHHHHHHHHHHHTTCE--EEESCCEEEEEEET-TEEEEEESSC-----EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHcCCE--EECCCEEEEEEEcC-CeEEEEECCC-----EEEcCEEEEcCCcCh
Confidence 56777888888888998 99999999999876 5677765432 699999999999764
No 150
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.33 E-value=7.5e-12 Score=106.99 Aligned_cols=64 Identities=11% Similarity=0.104 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEe-cCCceEEEEeCEEEEccCCCCCC
Q 024975 103 EEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRK-KDDVVEEETFDAVVVCNGHFSVP 168 (259)
Q Consensus 103 ~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~-g~~~~~~~~ad~VIlAtG~~s~~ 168 (259)
..+...|.+.+.+.+++ ++.++.|+++..+++....|...+ .+++...+.++.||+|||.++..
T Consensus 155 ~~l~~~L~~~~~~~gv~--i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 219 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTS--YFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYGRT 219 (621)
T ss_dssp HHHHHHHHHHHTTSCCE--EEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHhCCCE--EEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCccccc
Confidence 46777888887778998 999999999987653334566554 33555679999999999987643
No 151
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.32 E-value=8.8e-12 Score=97.68 Aligned_cols=140 Identities=14% Similarity=0.064 Sum_probs=80.5
Q ss_pred CeEEEECCChHHHHHHHHHHHc--CCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceecccccccee
Q 024975 3 RHVAVIGAGAAGLVVGHELLRE--GHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGF 80 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~--g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (259)
+||+|||||++|+++|..|++. |.+|+|+|+.+.+|+...... ..............++..
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g--------~~~~~~~~~~~~~~~L~~--------- 128 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGG--------QLFSAMVMRKPAHLFLQE--------- 128 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCG--------GGCCCEEEETTTHHHHHH---------
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccC--------cccchhhhhhHHHHHHHh---------
Confidence 5999999999999999999998 999999999988875432110 000000000000000000
Q ss_pred cCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHh-CCceeEEeceeEEEEEEeC--C----CcEEEEEEe------c-
Q 024975 81 QAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREF-GVDQVVRLHTEVLNARLVE--S----NKWKVKSRK------K- 146 (259)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~v~~~~~v~~i~~~~--~----~~~~v~~~~------g- 146 (259)
...++... ..........++...+.+.+.+. +++ ++.+++|+++...+ + ....|.+.. +
T Consensus 129 ~Gv~~~~~-----g~~~~~~~~~~~~~~L~~~a~~~~GV~--i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~ 201 (326)
T 2gjc_A 129 LEIPYEDE-----GDYVVVKHAALFISTVLSKVLQLPNVK--LFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHG 201 (326)
T ss_dssp TTCCCEEC-----SSEEEESCHHHHHHHHHHHHHTSTTEE--EETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC--
T ss_pred hCcccccC-----CCeEEEcchHHHHHHHHHHHHHhcCcE--EEecceeeeeeecccccCCCcEEEEEEecceeeccccc
Confidence 00111100 00000113366777777777664 888 89999999998763 1 222343321 1
Q ss_pred ---CCceEEEEe---------------CEEEEccCCCC
Q 024975 147 ---DDVVEEETF---------------DAVVVCNGHFS 166 (259)
Q Consensus 147 ---~~~~~~~~a---------------d~VIlAtG~~s 166 (259)
......+.+ +.||+|||+.+
T Consensus 202 ~~~~~d~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~ 239 (326)
T 2gjc_A 202 TQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDG 239 (326)
T ss_dssp -CCCCCCEEEEESCCCSSSCCCSSTTCCEEEECCCCC-
T ss_pred ceeccCceEEEEeeccccccccccccCCEEEECcCCCc
Confidence 011246899 99999999743
No 152
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.31 E-value=1.8e-11 Score=105.44 Aligned_cols=63 Identities=11% Similarity=0.149 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEe-cCCceEEEEeCEEEEccCCCCC
Q 024975 103 EEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRK-KDDVVEEETFDAVVVCNGHFSV 167 (259)
Q Consensus 103 ~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~-g~~~~~~~~ad~VIlAtG~~s~ 167 (259)
..+...|.+.+.+.+++ ++.++.|+++...++....+...+ .++....+.++.||+|||.++.
T Consensus 158 ~~l~~~L~~~a~~~gv~--i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~ 221 (660)
T 2bs2_A 158 HTMLFAVANECLKLGVS--IQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGR 221 (660)
T ss_dssp HHHHHHHHHHHHHHTCE--EECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCCCGG
T ss_pred HHHHHHHHHHHHhCCCE--EEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCcchh
Confidence 46778888888888999 999999999987653334455543 2344557999999999998664
No 153
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.29 E-value=5.1e-12 Score=104.20 Aligned_cols=42 Identities=31% Similarity=0.567 Sum_probs=39.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeee
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIY 43 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~ 43 (259)
|+||+|||||++|+++|+.|.++|.+|+|+|+.+.+||.+..
T Consensus 1 ~~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~t 42 (431)
T 3k7m_X 1 MYDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAYS 42 (431)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCE
T ss_pred CCCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCeecc
Confidence 589999999999999999999999999999999999988753
No 154
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.28 E-value=1.9e-11 Score=104.44 Aligned_cols=65 Identities=14% Similarity=0.068 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHhC-CceeEEeceeEEEEEEeCCCcEEEEEEe-cCCceEEEEeCEEEEccCCCCCCc
Q 024975 103 EEVLRYLQNFAREFG-VDQVVRLHTEVLNARLVESNKWKVKSRK-KDDVVEEETFDAVVVCNGHFSVPR 169 (259)
Q Consensus 103 ~~~~~~l~~~~~~~~-~~~~v~~~~~v~~i~~~~~~~~~v~~~~-g~~~~~~~~ad~VIlAtG~~s~~~ 169 (259)
..+...|.+.+.+.+ ++ ++.++.|+++..+++..+.+...+ .+++...+.++.||+|||.++...
T Consensus 134 ~~l~~~L~~~~~~~gnv~--i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~~ 200 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQ--RFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVY 200 (602)
T ss_dssp HHHHHHHHHHHTTCTTEE--EEETEEEEEEEEETTEEEEEEEEETTTTEEEEEECSCEEECCCCCGGGS
T ss_pred HHHHHHHHHHHHhCCCcE--EEeCCEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCcccc
Confidence 567777777777777 88 999999999988753334454443 334445799999999999876543
No 155
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.28 E-value=1.2e-11 Score=104.81 Aligned_cols=62 Identities=21% Similarity=0.278 Sum_probs=48.1
Q ss_pred CCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCC-cEEEEEEecCCceEEEEeCEEEEccCCCCCC
Q 024975 100 PGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESN-KWKVKSRKKDDVVEEETFDAVVVCNGHFSVP 168 (259)
Q Consensus 100 ~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~-~~~v~~~~g~~~~~~~~ad~VIlAtG~~s~~ 168 (259)
..+..+..+|.+.+.+.|++ ++.+ +|+++...+++ .+.|.+.+|. .+.+|.||+|+|.+|..
T Consensus 162 i~~~~l~~~L~~~a~~~gv~--~~~~-~v~~i~~~~~g~~~~v~~~~g~----~i~ad~vV~A~G~~s~~ 224 (538)
T 2aqj_A 162 FDAHLVADFLKRWAVERGVN--RVVD-EVVDVRLNNRGYISNLLTKEGR----TLEADLFIDCSGMRGLL 224 (538)
T ss_dssp ECHHHHHHHHHHHHHHTTCE--EEEC-CEEEEEECTTSCEEEEEETTSC----EECCSEEEECCGGGCCC
T ss_pred EeHHHHHHHHHHHHHHCCCE--EEEe-eEeEEEEcCCCcEEEEEECCCc----EEEeCEEEECCCCchhh
Confidence 35588999999999888998 8888 89999886533 2456665543 79999999999976644
No 156
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=99.28 E-value=2.5e-12 Score=104.33 Aligned_cols=136 Identities=21% Similarity=0.237 Sum_probs=81.2
Q ss_pred CeEEEECCChHHHHHHHHHHHc--CCcEEEEeeCCCc---CceeeeCCCCCCCCCCCCCCCCCcccccc-cc-cee-ccc
Q 024975 3 RHVAVIGAGAAGLVVGHELLRE--GHTVVVYEKGEQV---GGSWIYTSETESDPLGVDPNRYPVHSSLY-KS-LRV-NLP 74 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~--g~~v~v~e~~~~~---gg~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~-~~~ 74 (259)
+||+||||||+|+++|..|+++ |++|+|+|+.+.+ |+.....+...... ...... .. +.. ..+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~ 71 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHP---------ANPLSYLDAPERLNPQF 71 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCT---------TCGGGGSSCGGGGCCEE
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhh---------cCcchhhhhhHHHhhcc
Confidence 4899999999999999999999 9999999998776 54444333221100 000000 00 000 000
Q ss_pred cccceecCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEE
Q 024975 75 RELMGFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEET 154 (259)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ 154 (259)
.....+........ ...........+.++.+.|.+.+.+.+++ ++++++|++++.. . .+.
T Consensus 72 ~~~~~~~~~g~~~~--~~~~~~~~~~~r~~l~~~L~~~~~~~gv~--i~~~~~v~~i~~~------------~----~~~ 131 (381)
T 3c4a_A 72 LEDFKLVHHNEPSL--MSTGVLLCGVERRGLVHALRDKCRSQGIA--IRFESPLLEHGEL------------P----LAD 131 (381)
T ss_dssp ECCEEEEESSSEEE--CCCCSCEEEEEHHHHHHHHHHHHHHTTCE--EETTCCCCSGGGC------------C----GGG
T ss_pred ccceEEEeCCeeEE--ecCCCceeeecHHHHHHHHHHHHHHCCCE--EEeCCEeccchhc------------c----ccc
Confidence 00111110000000 00001111246688999999999888998 9999998887521 0 257
Q ss_pred eCEEEEccCCCCC
Q 024975 155 FDAVVVCNGHFSV 167 (259)
Q Consensus 155 ad~VIlAtG~~s~ 167 (259)
+|.||.|+|.+|.
T Consensus 132 ad~vV~AdG~~S~ 144 (381)
T 3c4a_A 132 YDLVVLANGVNHK 144 (381)
T ss_dssp CSEEEECCGGGGG
T ss_pred CCEEEECCCCCch
Confidence 9999999998775
No 157
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.28 E-value=2.5e-12 Score=99.80 Aligned_cols=42 Identities=36% Similarity=0.606 Sum_probs=39.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceee
Q 024975 1 MFRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWI 42 (259)
Q Consensus 1 ~~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~ 42 (259)
|++||+||||||+||+||..|+++|++|+||||++.+||.+.
T Consensus 1 Mt~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~ 42 (336)
T 3kkj_A 1 MTVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMS 42 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCccc
Confidence 789999999999999999999999999999999999998764
No 158
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.27 E-value=1.1e-11 Score=104.36 Aligned_cols=62 Identities=26% Similarity=0.302 Sum_probs=48.8
Q ss_pred CCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCC-cEEEEEEecCCceEEEEeCEEEEccCCCCCC
Q 024975 100 PGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESN-KWKVKSRKKDDVVEEETFDAVVVCNGHFSVP 168 (259)
Q Consensus 100 ~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~-~~~v~~~~g~~~~~~~~ad~VIlAtG~~s~~ 168 (259)
..+..+.+.|.+.+.+.|++ ++.+ +|+++...+++ .+.|.+.+|. .+.+|.||.|+|.+|..
T Consensus 170 ~~~~~l~~~L~~~a~~~gv~--~~~~-~v~~i~~~~~~~~~~v~~~~g~----~~~ad~vV~A~G~~S~~ 232 (511)
T 2weu_A 170 FDADEVARYLSEYAIARGVR--HVVD-DVQHVGQDERGWISGVHTKQHG----EISGDLFVDCTGFRGLL 232 (511)
T ss_dssp ECHHHHHHHHHHHHHHTTCE--EEEC-CEEEEEECTTSCEEEEEESSSC----EEECSEEEECCGGGCCC
T ss_pred EcHHHHHHHHHHHHHHCCCE--EEEC-eEeEEEEcCCCCEEEEEECCCC----EEEcCEEEECCCcchHH
Confidence 35688999999999888998 8888 99999885522 2556666543 79999999999987654
No 159
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.27 E-value=9.5e-12 Score=104.54 Aligned_cols=41 Identities=32% Similarity=0.527 Sum_probs=32.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceee
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWI 42 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~ 42 (259)
|++|+|||||++||+||.+|+++|++|+|+|+++.+||.+.
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~~ 41 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRAY 41 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-------C
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcEE
Confidence 68999999999999999999999999999999999998754
No 160
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.26 E-value=5.9e-12 Score=106.35 Aligned_cols=162 Identities=20% Similarity=0.133 Sum_probs=78.2
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCC------------CCCccccccccce
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPN------------RYPVHSSLYKSLR 70 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~ 70 (259)
+||+|||||++|+++|+.|++ |.+|+|+||.+..++.............+.... ...........+.
T Consensus 9 ~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~ds~~~~~~d~l~~g~g~~d~~~v~~~~ 87 (540)
T 1chu_A 9 CDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEGSTFYAQGGIAAVFDETDSIDSHVEDTLIAGAGICDRHAVEFVA 87 (540)
T ss_dssp CSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC-------------CCSHHHHHHHHHHHHHHTTTCCCHHHHHHHH
T ss_pred CCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCCChhhcCCCEEEecCCCCCHHHHHHHHHHhhcccCCHHHHHHHH
Confidence 699999999999999999999 999999999987665443322111111000000 0000000000000
Q ss_pred eccccccceec--CCCCCccC----------CCCCC--CCCCC----CCHHHHHHHHHHHHHH-hCCceeEEeceeEEEE
Q 024975 71 VNLPRELMGFQ--AYPFVARN----------YEGSV--DLRRY----PGHEEVLRYLQNFARE-FGVDQVVRLHTEVLNA 131 (259)
Q Consensus 71 ~~~~~~~~~~~--~~~~~~~~----------~~~~~--~~~~~----~~~~~~~~~l~~~~~~-~~~~~~v~~~~~v~~i 131 (259)
...+.....+. ..++.... ..... ....+ .....+...|.+.+.+ .+++ ++.++.|+++
T Consensus 88 ~~~~~~i~~l~~~Gv~f~~~~~~~~~g~~~~~~~gg~~~~r~~~~~d~~g~~l~~~L~~~~~~~~gv~--i~~~~~v~~L 165 (540)
T 1chu_A 88 SNARSCVQWLIDQGVLFDTHIQPNGEESYHLTREGGHSHRRILHAADATGREVETTLVSKALNHPNIR--VLERTNAVDL 165 (540)
T ss_dssp HHHHHHHHHHHHTTCC--------------------------------------CCCHHHHHHCTTEE--EECSEEEEEE
T ss_pred HhHHHHHHHHHHcCCCcccCcccCcCCccccccccccccCeEEEeCCCCHHHHHHHHHHHHHcCCCCE--EEeCcEEEEE
Confidence 00000000000 01111000 00000 00111 0123555666677766 6888 9999999999
Q ss_pred EE-eCC------CcEEEEEEe-cCCceEEEEeCEEEEccCCCCC
Q 024975 132 RL-VES------NKWKVKSRK-KDDVVEEETFDAVVVCNGHFSV 167 (259)
Q Consensus 132 ~~-~~~------~~~~v~~~~-g~~~~~~~~ad~VIlAtG~~s~ 167 (259)
.. .++ ..+.|.+.+ .+++...+.++.||+|||.++.
T Consensus 166 ~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 209 (540)
T 1chu_A 166 IVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASK 209 (540)
T ss_dssp EEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCGG
T ss_pred EEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCccc
Confidence 98 332 234466664 2344557899999999997663
No 161
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.26 E-value=4.1e-11 Score=101.93 Aligned_cols=63 Identities=17% Similarity=0.044 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEec-CCceEEEEeCEEEEccCCCCC
Q 024975 103 EEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKK-DDVVEEETFDAVVVCNGHFSV 167 (259)
Q Consensus 103 ~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g-~~~~~~~~ad~VIlAtG~~s~ 167 (259)
..+...+...+.+.|++ ++.+++|+++..+++..|.|.+.+. +++...+.||.||+|+|.|+.
T Consensus 188 ~~l~~~l~~~a~~~Ga~--i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~ 251 (571)
T 2rgh_A 188 ARLVIDNIKKAAEDGAY--LVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWVD 251 (571)
T ss_dssp HHHHHHHHHHHHHTTCE--EESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGHH
T ss_pred HHHHHHHHHHHHHcCCe--EEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhHH
Confidence 55666677777788999 9999999999987644466777642 233347999999999998763
No 162
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.25 E-value=1.5e-11 Score=102.65 Aligned_cols=43 Identities=37% Similarity=0.487 Sum_probs=39.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCC--cEEEEeeCCCcCceeee
Q 024975 1 MFRHVAVIGAGAAGLVVGHELLREGH--TVVVYEKGEQVGGSWIY 43 (259)
Q Consensus 1 ~~~~v~IIG~G~~Gl~~a~~L~~~g~--~v~v~e~~~~~gg~~~~ 43 (259)
|++||+|||||++||++|++|.++|. +|+|+|+++.+||.+..
T Consensus 1 m~~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~t 45 (477)
T 3nks_A 1 MGRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRS 45 (477)
T ss_dssp -CCEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCCE
T ss_pred CCceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceEE
Confidence 67999999999999999999999999 99999999999987644
No 163
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.25 E-value=9.4e-12 Score=103.64 Aligned_cols=42 Identities=29% Similarity=0.446 Sum_probs=38.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHcC------CcEEEEeeCCCcCceeee
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREG------HTVVVYEKGEQVGGSWIY 43 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g------~~v~v~e~~~~~gg~~~~ 43 (259)
++||+|||||++||++|++|.++| .+|+|+|+.+.+||....
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~s 52 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQT 52 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCCE
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEEE
Confidence 589999999999999999999999 999999999999876543
No 164
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.23 E-value=4.4e-11 Score=101.53 Aligned_cols=62 Identities=21% Similarity=0.162 Sum_probs=48.6
Q ss_pred CCHHHHHHHHHHHHHHh-CCceeEEeceeEEEEEEeCCC-cEEEEEEecCCceEEEEeCEEEEccCCCCCC
Q 024975 100 PGHEEVLRYLQNFAREF-GVDQVVRLHTEVLNARLVESN-KWKVKSRKKDDVVEEETFDAVVVCNGHFSVP 168 (259)
Q Consensus 100 ~~~~~~~~~l~~~~~~~-~~~~~v~~~~~v~~i~~~~~~-~~~v~~~~g~~~~~~~~ad~VIlAtG~~s~~ 168 (259)
..+..+.++|.+.+.+. |++ ++++ +|+++...+++ .+.|.+.+|. .+.+|.||+|+|.+|..
T Consensus 191 ~~~~~l~~~L~~~~~~~~Gv~--i~~~-~V~~i~~~~~g~~~~v~~~~G~----~i~ad~vI~A~G~~S~~ 254 (550)
T 2e4g_A 191 FDAHLVADFLRRFATEKLGVR--HVED-RVEHVQRDANGNIESVRTATGR----VFDADLFVDCSGFRGLL 254 (550)
T ss_dssp ECHHHHHHHHHHHHHHHSCCE--EEEC-CEEEEEECTTSCEEEEEETTSC----EEECSEEEECCGGGCCC
T ss_pred EcHHHHHHHHHHHHHhcCCcE--EEEC-eEeEEEEcCCCCEEEEEECCCC----EEECCEEEECCCCchhh
Confidence 45678999999999988 999 8999 99999876522 2456665543 79999999999976643
No 165
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.22 E-value=2.7e-12 Score=104.94 Aligned_cols=56 Identities=13% Similarity=0.083 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHhCCceeEEeceeEE---------EEEEeCCCcEEEEEEecCCceEEEEeCEEEEccCCCC
Q 024975 103 EEVLRYLQNFAREFGVDQVVRLHTEVL---------NARLVESNKWKVKSRKKDDVVEEETFDAVVVCNGHFS 166 (259)
Q Consensus 103 ~~~~~~l~~~~~~~~~~~~v~~~~~v~---------~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlAtG~~s 166 (259)
..+...|.+.+.+.|++ ++++++|+ ++...+ +.|.|.+.+ ..+.||.||+|+|.++
T Consensus 172 ~~l~~~L~~~~~~~Gv~--i~~~~~v~~~~g~~~~~~i~~~~-~~v~v~~~~-----g~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 172 GSLALLAAQQAIGQGAG--LLLNTRAELVPGGVRLHRLTVTN-THQIVVHET-----RQIRAGVIIVAAGAAG 236 (405)
T ss_dssp HHHHHHHHHHHHTTTCE--EECSCEEEEETTEEEEECBCC--------CBCC-----EEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCE--EEcCCEEEeccccccccceEeeC-CeEEEEECC-----cEEECCEEEECCCccH
Confidence 56888888888888998 99999999 776654 456555433 2689999999999875
No 166
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.20 E-value=5.8e-11 Score=105.50 Aligned_cols=58 Identities=21% Similarity=0.208 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEccCCCC
Q 024975 102 HEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVCNGHFS 166 (259)
Q Consensus 102 ~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlAtG~~s 166 (259)
...+...|.+.+.+.|++ ++.+++|+++...++..+.|.+.++ .+.||.||+|+|.++
T Consensus 150 p~~l~~~L~~~a~~~Gv~--i~~~t~V~~i~~~~~~v~~V~t~~G-----~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 150 AARAVQLLIKRTESAGVT--YRGSTTVTGIEQSGGRVTGVQTADG-----VIPADIVVSCAGFWG 207 (830)
T ss_dssp HHHHHHHHHHHHHHTTCE--EECSCCEEEEEEETTEEEEEEETTE-----EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCE--EECCceEEEEEEeCCEEEEEEECCc-----EEECCEEEECCccch
Confidence 367888888888889999 9999999999987533345665442 699999999999875
No 167
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=99.20 E-value=3.7e-10 Score=97.38 Aligned_cols=67 Identities=9% Similarity=-0.023 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHh-CC-ceeEEeceeEEEEEEeCC---CcEEEEEEe-cCCceEEEEeCEEEEccCCCCCCccC
Q 024975 103 EEVLRYLQNFAREF-GV-DQVVRLHTEVLNARLVES---NKWKVKSRK-KDDVVEEETFDAVVVCNGHFSVPRLA 171 (259)
Q Consensus 103 ~~~~~~l~~~~~~~-~~-~~~v~~~~~v~~i~~~~~---~~~~v~~~~-g~~~~~~~~ad~VIlAtG~~s~~~~~ 171 (259)
..+...+.+.+.+. ++ + ++.++.|+++..+++ ....|...+ .++....+.++.||+|||.++....|
T Consensus 151 ~~~~~~l~~~~~~~~gv~~--i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~~~y~~ 223 (643)
T 1jnr_A 151 ESYKPIIAEAAKMAVGEEN--IYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGATLLFRP 223 (643)
T ss_dssp TTHHHHHHHHHHHHHCGGG--EECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSSSCC
T ss_pred HHHHHHHHHHHHhcCCCcE--EEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCcccccccC
Confidence 45667777777777 99 8 999999999988653 333454432 23444578999999999987764434
No 168
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.19 E-value=1.4e-11 Score=102.02 Aligned_cols=59 Identities=22% Similarity=0.238 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHHhCCceeEEeceeEEEEEE---------------eCCCcEEEEEEecCCceEEE--EeCEEEEccCC
Q 024975 102 HEEVLRYLQNFAREFGVDQVVRLHTEVLNARL---------------VESNKWKVKSRKKDDVVEEE--TFDAVVVCNGH 164 (259)
Q Consensus 102 ~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~---------------~~~~~~~v~~~~g~~~~~~~--~ad~VIlAtG~ 164 (259)
...+...+.+.+.+.|++ ++.+++|+++.. .+++.+.|.+.++ .+ .||.||+|+|.
T Consensus 180 ~~~l~~~L~~~~~~~Gv~--i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-----~i~~~Ad~VV~AtG~ 252 (448)
T 3axb_A 180 AEKVVDYYYRRASGAGVE--FIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-----TRVEVGEKLVVAAGV 252 (448)
T ss_dssp HHHHHHHHHHHHHHTTCE--EEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-----CEEEEEEEEEECCGG
T ss_pred HHHHHHHHHHHHHhCCCE--EEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-----EEeecCCEEEECCCc
Confidence 368888888888889999 999999999987 3322356666543 47 99999999998
Q ss_pred CCC
Q 024975 165 FSV 167 (259)
Q Consensus 165 ~s~ 167 (259)
++.
T Consensus 253 ~s~ 255 (448)
T 3axb_A 253 WSN 255 (448)
T ss_dssp GHH
T ss_pred CHH
Confidence 754
No 169
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.18 E-value=5.7e-11 Score=100.28 Aligned_cols=42 Identities=33% Similarity=0.484 Sum_probs=39.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeee
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIY 43 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~ 43 (259)
++||+|||||++||+||..|.+.|.+|+|+|+++.+||.+..
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t 45 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYT 45 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCE
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceee
Confidence 579999999999999999999999999999999999987644
No 170
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.17 E-value=1.4e-10 Score=97.87 Aligned_cols=62 Identities=15% Similarity=0.126 Sum_probs=47.2
Q ss_pred CCHHHHHHHHHHHHHH-hCCceeEEeceeEEEEEEeCCC-cEEEEEEecCCceEEEEeCEEEEccCCCCCC
Q 024975 100 PGHEEVLRYLQNFARE-FGVDQVVRLHTEVLNARLVESN-KWKVKSRKKDDVVEEETFDAVVVCNGHFSVP 168 (259)
Q Consensus 100 ~~~~~~~~~l~~~~~~-~~~~~~v~~~~~v~~i~~~~~~-~~~v~~~~g~~~~~~~~ad~VIlAtG~~s~~ 168 (259)
..+..+.++|.+.+.+ .|++ ++.+ +|+++...+++ .+.|.+.+|. .+.+|+||.|+|.+|..
T Consensus 172 ~~r~~l~~~L~~~a~~~~Gv~--i~~~-~v~~i~~~~~g~~~~v~~~~g~----~i~ad~vV~AdG~~S~~ 235 (526)
T 2pyx_A 172 LNAAKFSQLLTEHCTQKLGVT--HIRD-HVSQIINNQHGDIEKLITKQNG----EISGQLFIDCTGAKSLL 235 (526)
T ss_dssp ECHHHHHHHHHHHHHHTSCCE--EEEC-CEEEEEECTTSCEEEEEESSSC----EEECSEEEECSGGGCCC
T ss_pred EcHHHHHHHHHHHHHhcCCCE--EEEe-EEEEEEecCCCcEEEEEECCCC----EEEcCEEEECCCcchHH
Confidence 3568899999999988 8998 8888 69999886522 2345555443 59999999999976643
No 171
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.14 E-value=4.3e-10 Score=93.30 Aligned_cols=100 Identities=24% Similarity=0.281 Sum_probs=79.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
..+++|||+|+.|+.+|..|.+.|.+|+++|+.+.+.
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l------------------------------------------- 203 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRIL------------------------------------------- 203 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC-------------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccc-------------------------------------------
Confidence 3689999999999999999999999999999975320
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEc
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlA 161 (259)
+. + ..++.+.+.+.+++.+++ ++.+++|++++..+ +.+.+.+.++. .+.+|.||+|
T Consensus 204 --~~-------------~--~~~~~~~l~~~l~~~Gv~--i~~~~~V~~i~~~~-~~v~v~~~~g~----~i~~D~vv~A 259 (455)
T 2yqu_A 204 --PT-------------M--DLEVSRAAERVFKKQGLT--IRTGVRVTAVVPEA-KGARVELEGGE----VLEADRVLVA 259 (455)
T ss_dssp --TT-------------S--CHHHHHHHHHHHHHHTCE--EECSCCEEEEEEET-TEEEEEETTSC----EEEESEEEEC
T ss_pred --cc-------------c--CHHHHHHHHHHHHHCCCE--EEECCEEEEEEEeC-CEEEEEECCCe----EEEcCEEEEC
Confidence 00 0 067777888888888999 99999999998765 55666665543 7999999999
Q ss_pred cCCCCCCcc
Q 024975 162 NGHFSVPRL 170 (259)
Q Consensus 162 tG~~s~~~~ 170 (259)
+| ..|+.
T Consensus 260 ~G--~~p~~ 266 (455)
T 2yqu_A 260 VG--RRPYT 266 (455)
T ss_dssp SC--EEECC
T ss_pred cC--CCcCC
Confidence 99 45544
No 172
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.14 E-value=1.5e-10 Score=99.72 Aligned_cols=64 Identities=13% Similarity=-0.027 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHh--CCceeEEeceeEEEEEEeCC---CcEEEEEEe-cCCceEEEEeCEEEEccCCCCCC
Q 024975 103 EEVLRYLQNFAREF--GVDQVVRLHTEVLNARLVES---NKWKVKSRK-KDDVVEEETFDAVVVCNGHFSVP 168 (259)
Q Consensus 103 ~~~~~~l~~~~~~~--~~~~~v~~~~~v~~i~~~~~---~~~~v~~~~-g~~~~~~~~ad~VIlAtG~~s~~ 168 (259)
..+...|.+.+.+. +++ ++.++.|+++..+++ ....+...+ .+++...+.|+.||+|||.++..
T Consensus 166 ~~i~~~L~~~a~~~~~gV~--i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g~~ 235 (662)
T 3gyx_A 166 ESYKVIVAEAAKNALGQDR--IIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAVNV 235 (662)
T ss_dssp TSHHHHHHHHHHHHHCTTT--EECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSS
T ss_pred HHHHHHHHHHHHhcCCCcE--EEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCccccc
Confidence 56777788888777 999 999999999988764 334454433 23555679999999999987643
No 173
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.13 E-value=5.2e-10 Score=90.78 Aligned_cols=97 Identities=21% Similarity=0.166 Sum_probs=79.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
..+++|||+|+.|+.+|..|.+.|.+|+++|+.+.+..
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~------------------------------------------ 182 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMP------------------------------------------ 182 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST------------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhh------------------------------------------
Confidence 46899999999999999999999999999999753210
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEc
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlA 161 (259)
. .++ .++.+.+.+.+++.+++ ++.+++|++++..+ +.+.+.+.++. .+.+|.||+|
T Consensus 183 ---~------------~~~--~~~~~~l~~~l~~~gv~--i~~~~~v~~i~~~~-~~~~v~~~~g~----~i~~d~vv~a 238 (384)
T 2v3a_A 183 ---G------------LLH--PAAAKAVQAGLEGLGVR--FHLGPVLASLKKAG-EGLEAHLSDGE----VIPCDLVVSA 238 (384)
T ss_dssp ---T------------TSC--HHHHHHHHHHHHTTTCE--EEESCCEEEEEEET-TEEEEEETTSC----EEEESEEEEC
T ss_pred ---c------------ccC--HHHHHHHHHHHHHcCCE--EEeCCEEEEEEecC-CEEEEEECCCC----EEECCEEEEC
Confidence 0 001 67778888888888999 99999999998765 56777776654 7999999999
Q ss_pred cCC
Q 024975 162 NGH 164 (259)
Q Consensus 162 tG~ 164 (259)
+|.
T Consensus 239 ~G~ 241 (384)
T 2v3a_A 239 VGL 241 (384)
T ss_dssp SCE
T ss_pred cCC
Confidence 994
No 174
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.12 E-value=1.1e-09 Score=91.00 Aligned_cols=105 Identities=27% Similarity=0.334 Sum_probs=81.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
..+++|||+|+.|+.+|..|.+.|.+|+|+|+.+.+.
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l------------------------------------------- 205 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEIL------------------------------------------- 205 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccc-------------------------------------------
Confidence 3689999999999999999999999999999975331
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEec-CCceEEEEeCEEEE
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKK-DDVVEEETFDAVVV 160 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g-~~~~~~~~ad~VIl 160 (259)
+ .+ ..++.+.+.+.+++.|++ ++++++|++++..+ +.+.+.+.+. +++...+.+|.||+
T Consensus 206 --~-------------~~--~~~~~~~l~~~l~~~gV~--i~~~~~v~~i~~~~-~~~~v~~~~~~~g~~~~i~~D~vv~ 265 (464)
T 2eq6_A 206 --P-------------QG--DPETAALLRRALEKEGIR--VRTKTKAVGYEKKK-DGLHVRLEPAEGGEGEEVVVDKVLV 265 (464)
T ss_dssp --T-------------TS--CHHHHHHHHHHHHHTTCE--EECSEEEEEEEEET-TEEEEEEEETTCCSCEEEEESEEEE
T ss_pred --c-------------cc--CHHHHHHHHHHHHhcCCE--EEcCCEEEEEEEeC-CEEEEEEeecCCCceeEEEcCEEEE
Confidence 0 00 067778888888889999 99999999998765 5566776621 13234789999999
Q ss_pred ccCCCCCCccC
Q 024975 161 CNGHFSVPRLA 171 (259)
Q Consensus 161 AtG~~s~~~~~ 171 (259)
|+| ..|+.+
T Consensus 266 a~G--~~p~~~ 274 (464)
T 2eq6_A 266 AVG--RKPRTE 274 (464)
T ss_dssp CSC--EEESCT
T ss_pred CCC--cccCCC
Confidence 999 455543
No 175
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.11 E-value=9.2e-10 Score=91.18 Aligned_cols=101 Identities=18% Similarity=0.194 Sum_probs=80.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
..+++|||+|+.|+.+|..|.+.|.+|+++|+.+.+.
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l------------------------------------------- 203 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPL------------------------------------------- 203 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchh-------------------------------------------
Confidence 3689999999999999999999999999999975331
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEc
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlA 161 (259)
+ .+. .++.+.+.+.+++.|++ ++.+++|++++..+++.+.+.+.++. .+.+|.||+|
T Consensus 204 --~-------------~~~--~~~~~~l~~~l~~~Gv~--i~~~~~v~~i~~~~~~~~~v~~~~g~----~i~~D~vv~a 260 (450)
T 1ges_A 204 --P-------------SFD--PMISETLVEVMNAEGPQ--LHTNAIPKAVVKNTDGSLTLELEDGR----SETVDCLIWA 260 (450)
T ss_dssp --T-------------TSC--HHHHHHHHHHHHHHSCE--EECSCCEEEEEECTTSCEEEEETTSC----EEEESEEEEC
T ss_pred --h-------------hhh--HHHHHHHHHHHHHCCCE--EEeCCEEEEEEEeCCcEEEEEECCCc----EEEcCEEEEC
Confidence 0 000 56777888888889999 99999999998765334777776654 7899999999
Q ss_pred cCCCCCCcc
Q 024975 162 NGHFSVPRL 170 (259)
Q Consensus 162 tG~~s~~~~ 170 (259)
+| ..|+.
T Consensus 261 ~G--~~p~~ 267 (450)
T 1ges_A 261 IG--REPAN 267 (450)
T ss_dssp SC--EEESC
T ss_pred CC--CCcCC
Confidence 99 45554
No 176
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.07 E-value=2.1e-09 Score=89.21 Aligned_cols=103 Identities=19% Similarity=0.261 Sum_probs=80.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
.++++|||+|+.|+.+|..|.+.|.+|+++|+.+.+.
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l------------------------------------------- 206 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEIL------------------------------------------- 206 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS-------------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccc-------------------------------------------
Confidence 4689999999999999999999999999999975331
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEc
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlA 161 (259)
+ .+. .++.+.+.+.+++.|++ ++.+++|+++...+ +.+.+.+.. ++....+.+|.||+|
T Consensus 207 --~-------------~~~--~~~~~~l~~~l~~~gv~--i~~~~~v~~i~~~~-~~~~v~~~~-~g~~~~~~~D~vv~a 265 (455)
T 1ebd_A 207 --S-------------GFE--KQMAAIIKKRLKKKGVE--VVTNALAKGAEERE-DGVTVTYEA-NGETKTIDADYVLVT 265 (455)
T ss_dssp --T-------------TSC--HHHHHHHHHHHHHTTCE--EEESEEEEEEEEET-TEEEEEEEE-TTEEEEEEESEEEEC
T ss_pred --c-------------ccC--HHHHHHHHHHHHHCCCE--EEeCCEEEEEEEeC-CeEEEEEEe-CCceeEEEcCEEEEC
Confidence 0 000 67778888888889999 99999999998765 456666652 112247899999999
Q ss_pred cCCCCCCcc
Q 024975 162 NGHFSVPRL 170 (259)
Q Consensus 162 tG~~s~~~~ 170 (259)
+| ..|+.
T Consensus 266 ~G--~~p~~ 272 (455)
T 1ebd_A 266 VG--RRPNT 272 (455)
T ss_dssp SC--EEESC
T ss_pred cC--CCccc
Confidence 99 45554
No 177
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.07 E-value=8.2e-11 Score=98.26 Aligned_cols=41 Identities=37% Similarity=0.568 Sum_probs=37.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceee
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWI 42 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~ 42 (259)
.+||+|||||++||++|..|.+.|.+|+|+|+++.+||.+.
T Consensus 16 ~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~ 56 (478)
T 2ivd_A 16 GMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVG 56 (478)
T ss_dssp -CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceee
Confidence 47999999999999999999999999999999999987653
No 178
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=99.05 E-value=1.2e-09 Score=90.49 Aligned_cols=101 Identities=23% Similarity=0.220 Sum_probs=77.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
.++++|||+|+.|+.+|..|.+.|.+|+++|+.+.+...
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------------- 187 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGV----------------------------------------- 187 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT-----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccc-----------------------------------------
Confidence 478999999999999999999999999999997533100
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEc
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlA 161 (259)
.+. .++.+.+.+.+++.|++ ++++++|+++...+ ..+.+.++ + ..+.+|.||+|
T Consensus 188 ----------------~~~--~~~~~~l~~~l~~~gv~--i~~~~~v~~i~~~~-~v~~v~~~-~----~~i~~d~vi~a 241 (447)
T 1nhp_A 188 ----------------YLD--KEFTDVLTEEMEANNIT--IATGETVERYEGDG-RVQKVVTD-K----NAYDADLVVVA 241 (447)
T ss_dssp ----------------TCC--HHHHHHHHHHHHTTTEE--EEESCCEEEEECSS-BCCEEEES-S----CEEECSEEEEC
T ss_pred ----------------cCC--HHHHHHHHHHHHhCCCE--EEcCCEEEEEEccC-cEEEEEEC-C----CEEECCEEEEC
Confidence 000 67778888888888999 99999999998642 33445553 2 27899999999
Q ss_pred cCCCCCCccC
Q 024975 162 NGHFSVPRLA 171 (259)
Q Consensus 162 tG~~s~~~~~ 171 (259)
+| ..|+.+
T Consensus 242 ~G--~~p~~~ 249 (447)
T 1nhp_A 242 VG--VRPNTA 249 (447)
T ss_dssp SC--EEESCG
T ss_pred cC--CCCChH
Confidence 99 455543
No 179
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.04 E-value=2.6e-09 Score=89.17 Aligned_cols=106 Identities=27% Similarity=0.414 Sum_probs=81.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
..+++|||+|+.|+.+|..|.+.|.+|+++|+.+.+..
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~------------------------------------------ 220 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGA------------------------------------------ 220 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSS------------------------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcccc------------------------------------------
Confidence 36899999999999999999999999999999764311
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEe-CCCcEEEEEEec-CCceEEEEeCEEE
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLV-ESNKWKVKSRKK-DDVVEEETFDAVV 159 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~-~~~~~~v~~~~g-~~~~~~~~ad~VI 159 (259)
.+. .++..++.+.+++.|++ ++.+++|+++... +++.+.+.+.+. ++....+.+|.||
T Consensus 221 ----------------~~~--~~~~~~l~~~l~~~gv~--i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv 280 (478)
T 1v59_A 221 ----------------SMD--GEVAKATQKFLKKQGLD--FKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLL 280 (478)
T ss_dssp ----------------SSC--HHHHHHHHHHHHHTTCE--EECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEE
T ss_pred ----------------ccC--HHHHHHHHHHHHHCCCE--EEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEE
Confidence 000 67778888888889999 9999999999873 225566776521 1122478999999
Q ss_pred EccCCCCCCccC
Q 024975 160 VCNGHFSVPRLA 171 (259)
Q Consensus 160 lAtG~~s~~~~~ 171 (259)
+|+| ..|+..
T Consensus 281 ~a~G--~~p~~~ 290 (478)
T 1v59_A 281 VAVG--RRPYIA 290 (478)
T ss_dssp ECSC--EEECCT
T ss_pred ECCC--CCcCCC
Confidence 9999 455543
No 180
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.03 E-value=3.7e-09 Score=88.72 Aligned_cols=101 Identities=18% Similarity=0.399 Sum_probs=80.2
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceecC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQA 82 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (259)
.+++|||+|+.|+-+|..|.+.|.+|+++++.+.+.
T Consensus 177 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------------------- 212 (500)
T 1onf_A 177 KKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRIL-------------------------------------------- 212 (500)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSC--------------------------------------------
T ss_pred CeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccC--------------------------------------------
Confidence 589999999999999999999999999999975431
Q ss_pred CCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEcc
Q 024975 83 YPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVCN 162 (259)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlAt 162 (259)
+ .+. .++...+.+.+++.|++ ++.+++|++++..+++.+.+.+.+|. ..+.+|.||+|+
T Consensus 213 -~-------------~~d--~~~~~~l~~~l~~~gv~--i~~~~~v~~i~~~~~~~~~v~~~~g~---~~~~~D~vi~a~ 271 (500)
T 1onf_A 213 -R-------------KFD--ESVINVLENDMKKNNIN--IVTFADVVEIKKVSDKNLSIHLSDGR---IYEHFDHVIYCV 271 (500)
T ss_dssp -T-------------TSC--HHHHHHHHHHHHHTTCE--EECSCCEEEEEESSTTCEEEEETTSC---EEEEESEEEECC
T ss_pred -c-------------ccc--hhhHHHHHHHHHhCCCE--EEECCEEEEEEEcCCceEEEEECCCc---EEEECCEEEECC
Confidence 0 000 67778888888899999 99999999998764344677776654 138999999999
Q ss_pred CCCCCCcc
Q 024975 163 GHFSVPRL 170 (259)
Q Consensus 163 G~~s~~~~ 170 (259)
| ..|+.
T Consensus 272 G--~~p~~ 277 (500)
T 1onf_A 272 G--RSPDT 277 (500)
T ss_dssp C--BCCTT
T ss_pred C--CCcCC
Confidence 9 45554
No 181
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=99.02 E-value=6.6e-09 Score=86.98 Aligned_cols=104 Identities=26% Similarity=0.318 Sum_probs=80.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+...
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------------- 212 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANL----------------------------------------- 212 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTC-----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc-----------------------------------------
Confidence 368999999999999999999999999999997643100
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEc
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlA 161 (259)
+. .++.+.+.+.+++. ++ ++.+++|.+++..+ +...+.+.+.+++...+.+|.||+|
T Consensus 213 -----------------~d--~~~~~~l~~~l~~~-V~--i~~~~~v~~i~~~~-~~v~v~~~~~~G~~~~i~~D~Vi~a 269 (492)
T 3ic9_A 213 -----------------QD--EEMKRYAEKTFNEE-FY--FDAKARVISTIEKE-DAVEVIYFDKSGQKTTESFQYVLAA 269 (492)
T ss_dssp -----------------CC--HHHHHHHHHHHHTT-SE--EETTCEEEEEEECS-SSEEEEEECTTCCEEEEEESEEEEC
T ss_pred -----------------CC--HHHHHHHHHHHhhC-cE--EEECCEEEEEEEcC-CEEEEEEEeCCCceEEEECCEEEEe
Confidence 00 66777777777766 88 99999999998876 5677777633343457999999999
Q ss_pred cCCCCCCccC
Q 024975 162 NGHFSVPRLA 171 (259)
Q Consensus 162 tG~~s~~~~~ 171 (259)
+| ..|+..
T Consensus 270 ~G--~~p~~~ 277 (492)
T 3ic9_A 270 TG--RKANVD 277 (492)
T ss_dssp SC--CEESCS
T ss_pred eC--CccCCC
Confidence 99 555543
No 182
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.01 E-value=3.7e-09 Score=86.67 Aligned_cols=101 Identities=26% Similarity=0.238 Sum_probs=81.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+.
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l------------------------------------------- 188 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVL------------------------------------------- 188 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTT-------------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchh-------------------------------------------
Confidence 4689999999999999999999999999999975331
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEc
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlA 161 (259)
+ ..++ ..+.+++.+.+++.|++ ++++++|+++...++....|.+.++. .+.+|.||+|
T Consensus 189 --~------------~~~~--~~~~~~l~~~l~~~GV~--i~~~~~v~~i~~~~~~v~~v~l~dG~----~i~aD~Vv~a 246 (415)
T 3lxd_A 189 --A------------RVAG--EALSEFYQAEHRAHGVD--LRTGAAMDCIEGDGTKVTGVRMQDGS----VIPADIVIVG 246 (415)
T ss_dssp --T------------TTSC--HHHHHHHHHHHHHTTCE--EEETCCEEEEEESSSBEEEEEESSSC----EEECSEEEEC
T ss_pred --h------------hhcC--HHHHHHHHHHHHhCCCE--EEECCEEEEEEecCCcEEEEEeCCCC----EEEcCEEEEC
Confidence 0 0011 77888889999999999 99999999998765233467777765 7999999999
Q ss_pred cCCCCCCc
Q 024975 162 NGHFSVPR 169 (259)
Q Consensus 162 tG~~s~~~ 169 (259)
+| ..|+
T Consensus 247 ~G--~~p~ 252 (415)
T 3lxd_A 247 IG--IVPC 252 (415)
T ss_dssp SC--CEES
T ss_pred CC--CccC
Confidence 99 4454
No 183
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=99.01 E-value=7.1e-09 Score=86.33 Aligned_cols=104 Identities=24% Similarity=0.280 Sum_probs=80.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
..+++|||+|+.|+-+|..|.+.|.+|+++++.+.+.
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l------------------------------------------- 210 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCA------------------------------------------- 210 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccc-------------------------------------------
Confidence 3689999999999999999999999999999975331
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHH-HHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEE
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFA-REFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVV 160 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIl 160 (259)
+ .+. .++.+.+.+.+ ++.|++ ++.+++|++++..+ +.+.+.+.+.+++...+.+|.||+
T Consensus 211 --~-------------~~d--~~~~~~l~~~l~~~~gv~--i~~~~~v~~i~~~~-~~~~v~~~~~~g~~~~i~~D~vv~ 270 (468)
T 2qae_A 211 --P-------------TLD--EDVTNALVGALAKNEKMK--FMTSTKVVGGTNNG-DSVSLEVEGKNGKRETVTCEALLV 270 (468)
T ss_dssp --T-------------TSC--HHHHHHHHHHHHHHTCCE--EECSCEEEEEEECS-SSEEEEEECC---EEEEEESEEEE
T ss_pred --c-------------cCC--HHHHHHHHHHHhhcCCcE--EEeCCEEEEEEEcC-CeEEEEEEcCCCceEEEECCEEEE
Confidence 0 000 66778888888 889999 99999999998765 457777652122234789999999
Q ss_pred ccCCCCCCcc
Q 024975 161 CNGHFSVPRL 170 (259)
Q Consensus 161 AtG~~s~~~~ 170 (259)
|+| ..|+.
T Consensus 271 a~G--~~p~~ 278 (468)
T 2qae_A 271 SVG--RRPFT 278 (468)
T ss_dssp CSC--EEECC
T ss_pred CCC--cccCC
Confidence 999 45544
No 184
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.01 E-value=8e-09 Score=86.53 Aligned_cols=105 Identities=25% Similarity=0.295 Sum_probs=82.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+..
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------------------------------------------ 235 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILG------------------------------------------ 235 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSS------------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccccc------------------------------------------
Confidence 36899999999999999999999999999998753310
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecC-CceEEEEeCEEEE
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKD-DVVEEETFDAVVV 160 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~-~~~~~~~ad~VIl 160 (259)
.+. .++.+.+.+.+.+.+++ ++.+++|.++...+ +.+.+.+.+.+ ++...+.+|.||+
T Consensus 236 ----------------~~d--~~~~~~l~~~l~~~gV~--v~~~~~v~~i~~~~-~~~~v~~~~~~~g~~~~i~~D~Vi~ 294 (491)
T 3urh_A 236 ----------------GMD--GEVAKQLQRMLTKQGID--FKLGAKVTGAVKSG-DGAKVTFEPVKGGEATTLDAEVVLI 294 (491)
T ss_dssp ----------------SSC--HHHHHHHHHHHHHTTCE--EECSEEEEEEEEET-TEEEEEEEETTSCCCEEEEESEEEE
T ss_pred ----------------cCC--HHHHHHHHHHHHhCCCE--EEECCeEEEEEEeC-CEEEEEEEecCCCceEEEEcCEEEE
Confidence 000 67778888888889999 99999999999876 66777777532 3335799999999
Q ss_pred ccCCCCCCccC
Q 024975 161 CNGHFSVPRLA 171 (259)
Q Consensus 161 AtG~~s~~~~~ 171 (259)
|+| ..|+..
T Consensus 295 a~G--~~p~~~ 303 (491)
T 3urh_A 295 ATG--RKPSTD 303 (491)
T ss_dssp CCC--CEECCT
T ss_pred eeC--CccCCC
Confidence 999 555543
No 185
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.00 E-value=1.3e-09 Score=95.52 Aligned_cols=40 Identities=38% Similarity=0.589 Sum_probs=36.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCcee
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSW 41 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~ 41 (259)
.+||+|||||++|+++|..|.+.|.+|+|+|+.+.+||..
T Consensus 336 ~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ggri 375 (776)
T 4gut_A 336 NKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRV 375 (776)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTTC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceecee
Confidence 3799999999999999999999999999999998888743
No 186
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.99 E-value=4.8e-09 Score=87.15 Aligned_cols=101 Identities=21% Similarity=0.230 Sum_probs=79.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+.
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l------------------------------------------- 202 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLL------------------------------------------- 202 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccc-------------------------------------------
Confidence 3689999999999999999999999999999975331
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEc
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlA 161 (259)
+ .+. .++...+.+.+++.+++ ++.+++|++++..+ +.+.+.+.+|. . .+.+|.||+|
T Consensus 203 --~-------------~~~--~~~~~~l~~~l~~~gv~--i~~~~~v~~i~~~~-~~~~v~~~~G~--~-~i~~D~vv~a 259 (463)
T 2r9z_A 203 --F-------------QFD--PLLSATLAENMHAQGIE--THLEFAVAALERDA-QGTTLVAQDGT--R-LEGFDSVIWA 259 (463)
T ss_dssp --T-------------TSC--HHHHHHHHHHHHHTTCE--EESSCCEEEEEEET-TEEEEEETTCC--E-EEEESEEEEC
T ss_pred --c-------------ccC--HHHHHHHHHHHHHCCCE--EEeCCEEEEEEEeC-CeEEEEEeCCc--E-EEEcCEEEEC
Confidence 0 000 56677788888888999 99999999998765 44667765432 1 6899999999
Q ss_pred cCCCCCCcc
Q 024975 162 NGHFSVPRL 170 (259)
Q Consensus 162 tG~~s~~~~ 170 (259)
+| ..|+.
T Consensus 260 ~G--~~p~~ 266 (463)
T 2r9z_A 260 VG--RAPNT 266 (463)
T ss_dssp SC--EEESC
T ss_pred CC--CCcCC
Confidence 99 45554
No 187
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.99 E-value=4.5e-09 Score=87.95 Aligned_cols=101 Identities=20% Similarity=0.274 Sum_probs=81.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHc---CCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccc
Q 024975 2 FRHVAVIGAGAAGLVVGHELLRE---GHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELM 78 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~---g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (259)
..+++|||+|+.|+-+|..|.+. |.+|+++++.+.+.
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l---------------------------------------- 226 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMIL---------------------------------------- 226 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSS----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcc----------------------------------------
Confidence 36899999999999999999999 99999999976331
Q ss_pred eecCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEE
Q 024975 79 GFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAV 158 (259)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~V 158 (259)
+ .+. .++.+.+.+.+++.|++ ++++++|+++...+++.+.|.+.++. .+.+|.|
T Consensus 227 -----~-------------~~d--~~~~~~l~~~l~~~GV~--i~~~~~v~~i~~~~~~~~~v~~~~G~----~i~~D~v 280 (490)
T 1fec_A 227 -----R-------------GFD--SELRKQLTEQLRANGIN--VRTHENPAKVTKNADGTRHVVFESGA----EADYDVV 280 (490)
T ss_dssp -----T-------------TSC--HHHHHHHHHHHHHTTEE--EEETCCEEEEEECTTSCEEEEETTSC----EEEESEE
T ss_pred -----c-------------ccC--HHHHHHHHHHHHhCCCE--EEeCCEEEEEEEcCCCEEEEEECCCc----EEEcCEE
Confidence 0 000 67778888888889999 99999999998765345777776654 7999999
Q ss_pred EEccCCCCCCcc
Q 024975 159 VVCNGHFSVPRL 170 (259)
Q Consensus 159 IlAtG~~s~~~~ 170 (259)
|+|+| ..|+.
T Consensus 281 v~a~G--~~p~~ 290 (490)
T 1fec_A 281 MLAIG--RVPRS 290 (490)
T ss_dssp EECSC--EEESC
T ss_pred EEccC--CCcCc
Confidence 99999 45554
No 188
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.99 E-value=2.3e-09 Score=87.73 Aligned_cols=97 Identities=21% Similarity=0.291 Sum_probs=79.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+....
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~---------------------------------------- 182 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVRV---------------------------------------- 182 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHHH----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchhh----------------------------------------
Confidence 3689999999999999999999999999999975431000
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEc
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlA 161 (259)
++ .++.+.+.+.+++.|++ ++++++|.++...+ ....|.+.++. .+.+|.||+|
T Consensus 183 -----------------~~--~~~~~~l~~~l~~~GV~--i~~~~~v~~i~~~~-~~~~v~~~dg~----~i~aD~Vv~a 236 (410)
T 3ef6_A 183 -----------------LG--RRIGAWLRGLLTELGVQ--VELGTGVVGFSGEG-QLEQVMASDGR----SFVADSALIC 236 (410)
T ss_dssp -----------------HC--HHHHHHHHHHHHHHTCE--EECSCCEEEEECSS-SCCEEEETTSC----EEECSEEEEC
T ss_pred -----------------cC--HHHHHHHHHHHHHCCCE--EEeCCEEEEEeccC-cEEEEEECCCC----EEEcCEEEEe
Confidence 00 67778888888889999 99999999998654 55678887765 7999999999
Q ss_pred cCC
Q 024975 162 NGH 164 (259)
Q Consensus 162 tG~ 164 (259)
+|.
T Consensus 237 ~G~ 239 (410)
T 3ef6_A 237 VGA 239 (410)
T ss_dssp SCE
T ss_pred eCC
Confidence 994
No 189
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.99 E-value=7.1e-11 Score=94.71 Aligned_cols=35 Identities=29% Similarity=0.307 Sum_probs=32.1
Q ss_pred CeEEEECCChHHHHHHHHHHHcC------CcEEEEeeCCCc
Q 024975 3 RHVAVIGAGAAGLVVGHELLREG------HTVVVYEKGEQV 37 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g------~~v~v~e~~~~~ 37 (259)
+||+|||||++|+++|++|+++| .+|+|+|+....
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~~ 41 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTP 41 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCGG
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCCC
Confidence 49999999999999999999998 899999998643
No 190
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.99 E-value=3.2e-09 Score=86.71 Aligned_cols=97 Identities=25% Similarity=0.245 Sum_probs=78.6
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceecC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQA 82 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (259)
.+++|||+|+.|+.+|..|.+.|.+|+++++.+.+.
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~-------------------------------------------- 178 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVM-------------------------------------------- 178 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTT--------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcch--------------------------------------------
Confidence 579999999999999999999999999999975331
Q ss_pred CCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEcc
Q 024975 83 YPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVCN 162 (259)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlAt 162 (259)
+ ..++ .++.+.+.+.+++.|++ ++.+++|.++...++....|.+.+|. .+.+|.||+|+
T Consensus 179 -~------------~~~~--~~~~~~l~~~l~~~GV~--i~~~~~v~~i~~~~~~v~~V~~~dG~----~i~aD~Vv~a~ 237 (404)
T 3fg2_P 179 -A------------RVVT--PEISSYFHDRHSGAGIR--MHYGVRATEIAAEGDRVTGVVLSDGN----TLPCDLVVVGV 237 (404)
T ss_dssp -T------------TTSC--HHHHHHHHHHHHHTTCE--EECSCCEEEEEEETTEEEEEEETTSC----EEECSEEEECC
T ss_pred -h------------hccC--HHHHHHHHHHHHhCCcE--EEECCEEEEEEecCCcEEEEEeCCCC----EEEcCEEEECc
Confidence 0 0011 67788888888899999 99999999998765333457777665 79999999999
Q ss_pred CC
Q 024975 163 GH 164 (259)
Q Consensus 163 G~ 164 (259)
|.
T Consensus 238 G~ 239 (404)
T 3fg2_P 238 GV 239 (404)
T ss_dssp CE
T ss_pred CC
Confidence 94
No 191
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.98 E-value=5.2e-09 Score=87.68 Aligned_cols=101 Identities=15% Similarity=0.193 Sum_probs=80.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHc---CCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccc
Q 024975 2 FRHVAVIGAGAAGLVVGHELLRE---GHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELM 78 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~---g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (259)
..+++|||+|+.|+-+|..|.+. |.+|+++++.+.+.
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l---------------------------------------- 230 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLIL---------------------------------------- 230 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSC----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccc----------------------------------------
Confidence 36899999999999999999999 99999999975330
Q ss_pred eecCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEE
Q 024975 79 GFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAV 158 (259)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~V 158 (259)
+ .+. .++...+.+.+++.|++ ++++++|+++...+++.+.|.+.+|. .+.+|.|
T Consensus 231 -----~-------------~~d--~~~~~~l~~~l~~~GV~--i~~~~~v~~i~~~~~~~~~v~~~~G~----~i~~D~v 284 (495)
T 2wpf_A 231 -----R-------------GFD--ETIREEVTKQLTANGIE--IMTNENPAKVSLNTDGSKHVTFESGK----TLDVDVV 284 (495)
T ss_dssp -----T-------------TSC--HHHHHHHHHHHHHTTCE--EEESCCEEEEEECTTSCEEEEETTSC----EEEESEE
T ss_pred -----c-------------ccC--HHHHHHHHHHHHhCCCE--EEeCCEEEEEEEcCCceEEEEECCCc----EEEcCEE
Confidence 0 000 67778888888889999 99999999998765345777776654 7999999
Q ss_pred EEccCCCCCCcc
Q 024975 159 VVCNGHFSVPRL 170 (259)
Q Consensus 159 IlAtG~~s~~~~ 170 (259)
|+|+| ..|+.
T Consensus 285 v~a~G--~~p~~ 294 (495)
T 2wpf_A 285 MMAIG--RIPRT 294 (495)
T ss_dssp EECSC--EEECC
T ss_pred EECCC--Ccccc
Confidence 99999 45554
No 192
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.97 E-value=1e-08 Score=85.58 Aligned_cols=103 Identities=26% Similarity=0.362 Sum_probs=82.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
..+++|||+|+.|+-+|..|.+.|.+|+++++.+.+.
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l------------------------------------------- 216 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFL------------------------------------------- 216 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS-------------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcC-------------------------------------------
Confidence 3689999999999999999999999999999975331
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEc
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlA 161 (259)
+ .+. .++...+.+.+++.|++ ++.+++|++++..+ +...+.+.++++ ...+.+|.||+|
T Consensus 217 --~-------------~~~--~~~~~~l~~~l~~~Gv~--v~~~~~v~~i~~~~-~~~~v~~~~~~g-~~~~~~D~vi~a 275 (476)
T 3lad_A 217 --P-------------AVD--EQVAKEAQKILTKQGLK--ILLGARVTGTEVKN-KQVTVKFVDAEG-EKSQAFDKLIVA 275 (476)
T ss_dssp --T-------------TSC--HHHHHHHHHHHHHTTEE--EEETCEEEEEEECS-SCEEEEEESSSE-EEEEEESEEEEC
T ss_pred --c-------------ccC--HHHHHHHHHHHHhCCCE--EEECCEEEEEEEcC-CEEEEEEEeCCC-cEEEECCEEEEe
Confidence 0 000 67778888888889999 99999999998875 667777776543 357899999999
Q ss_pred cCCCCCCcc
Q 024975 162 NGHFSVPRL 170 (259)
Q Consensus 162 tG~~s~~~~ 170 (259)
+| ..|+.
T Consensus 276 ~G--~~p~~ 282 (476)
T 3lad_A 276 VG--RRPVT 282 (476)
T ss_dssp SC--EEECC
T ss_pred eC--CcccC
Confidence 99 45554
No 193
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.97 E-value=5.2e-09 Score=87.20 Aligned_cols=104 Identities=25% Similarity=0.309 Sum_probs=80.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+.
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l------------------------------------------- 213 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIV------------------------------------------- 213 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSS-------------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccc-------------------------------------------
Confidence 3689999999999999999999999999999975331
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEec-CCceEEEEeCEEEE
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKK-DDVVEEETFDAVVV 160 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g-~~~~~~~~ad~VIl 160 (259)
+ .+. .++.+++.+.+++.|++ ++.+++|.++...+ +.+.+.+.+. ++....+.+|.||+
T Consensus 214 --~-------------~~~--~~~~~~l~~~l~~~gv~--i~~~~~v~~i~~~~-~~~~v~~~~~~~g~~~~~~~D~vv~ 273 (470)
T 1dxl_A 214 --P-------------TMD--AEIRKQFQRSLEKQGMK--FKLKTKVVGVDTSG-DGVKLTVEPSAGGEQTIIEADVVLV 273 (470)
T ss_dssp --T-------------TSC--HHHHHHHHHHHHHSSCC--EECSEEEEEEECSS-SSEEEEEEESSSCCCEEEEESEEEC
T ss_pred --c-------------ccc--HHHHHHHHHHHHHcCCE--EEeCCEEEEEEEcC-CeEEEEEEecCCCcceEEECCEEEE
Confidence 0 000 67778888888889999 99999999998654 4567776531 12224789999999
Q ss_pred ccCCCCCCcc
Q 024975 161 CNGHFSVPRL 170 (259)
Q Consensus 161 AtG~~s~~~~ 170 (259)
|+| ..|+.
T Consensus 274 a~G--~~p~~ 281 (470)
T 1dxl_A 274 SAG--RTPFT 281 (470)
T ss_dssp CCC--EEECC
T ss_pred CCC--CCcCC
Confidence 999 45544
No 194
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.97 E-value=3e-09 Score=88.88 Aligned_cols=104 Identities=19% Similarity=0.206 Sum_probs=79.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
..+++|||+|+.|+.+|..|.+.|.+|+|+|+.+.+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l------------------------------------------- 221 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLM------------------------------------------- 221 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSS-------------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccc-------------------------------------------
Confidence 3689999999999999999999999999999975431
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEc
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlA 161 (259)
+ .+. .++.+.+.+.+++.+++ ++.+++|.+++..+ +...+.+.+..+....+.+|.||+|
T Consensus 222 --~-------------~~~--~~~~~~l~~~l~~~gV~--i~~~~~v~~i~~~~-~~~~v~~~~~~~~g~~~~~D~vv~a 281 (482)
T 1ojt_A 222 --Q-------------GAD--RDLVKVWQKQNEYRFDN--IMVNTKTVAVEPKE-DGVYVTFEGANAPKEPQRYDAVLVA 281 (482)
T ss_dssp --T-------------TSC--HHHHHHHHHHHGGGEEE--EECSCEEEEEEEET-TEEEEEEESSSCCSSCEEESCEEEC
T ss_pred --c-------------ccC--HHHHHHHHHHHHhcCCE--EEECCEEEEEEEcC-CeEEEEEeccCCCceEEEcCEEEEC
Confidence 0 000 67778888888888999 99999999998765 5567777650000025789999999
Q ss_pred cCCCCCCcc
Q 024975 162 NGHFSVPRL 170 (259)
Q Consensus 162 tG~~s~~~~ 170 (259)
+| ..|+.
T Consensus 282 ~G--~~p~~ 288 (482)
T 1ojt_A 282 AG--RAPNG 288 (482)
T ss_dssp CC--EEECG
T ss_pred cC--CCcCC
Confidence 99 45554
No 195
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.97 E-value=1.4e-08 Score=84.69 Aligned_cols=106 Identities=28% Similarity=0.352 Sum_probs=80.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
..+++|||+|+.|+.+|..|.+.|.+|+++|+.+.+...
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------------- 216 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGV----------------------------------------- 216 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCS-----------------------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCc-----------------------------------------
Confidence 368999999999999999999999999999997533100
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEec-CCceEEEEeCEEEE
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKK-DDVVEEETFDAVVV 160 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g-~~~~~~~~ad~VIl 160 (259)
.+. .++..++.+.+++.|++ ++.+++|+++...+++.+.+.+.+. .+....+.+|.||+
T Consensus 217 ----------------~~~--~~~~~~l~~~l~~~Gv~--i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~ 276 (474)
T 1zmd_A 217 ----------------GID--MEISKNFQRILQKQGFK--FKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLV 276 (474)
T ss_dssp ----------------SCC--HHHHHHHHHHHHHTTCE--EECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEE
T ss_pred ----------------ccC--HHHHHHHHHHHHHCCCE--EEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEE
Confidence 001 67778888888889999 9999999999876522266765421 11124789999999
Q ss_pred ccCCCCCCcc
Q 024975 161 CNGHFSVPRL 170 (259)
Q Consensus 161 AtG~~s~~~~ 170 (259)
|+| ..|+.
T Consensus 277 a~G--~~p~~ 284 (474)
T 1zmd_A 277 CIG--RRPFT 284 (474)
T ss_dssp CSC--EEECC
T ss_pred CcC--CCcCC
Confidence 999 45554
No 196
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.96 E-value=8.7e-09 Score=85.68 Aligned_cols=102 Identities=22% Similarity=0.246 Sum_probs=80.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
..+++|||+|+.|+-+|..|.+.|.+|+++++.+.+.
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l------------------------------------------- 207 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRAL------------------------------------------- 207 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------------------
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccc-------------------------------------------
Confidence 3689999999999999999999999999999975331
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEE-ecCCceEEEEeCEEEE
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSR-KKDDVVEEETFDAVVV 160 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~-~g~~~~~~~~ad~VIl 160 (259)
+ .+. .++.+++.+.+++.|++ ++.+++|+++...+ +...+.+. ++ ....+.+|.||+
T Consensus 208 --~-------------~~~--~~~~~~l~~~l~~~gv~--i~~~~~v~~i~~~~-~~~~v~~~~~g--~~~~~~~D~vv~ 265 (464)
T 2a8x_A 208 --P-------------NED--ADVSKEIEKQFKKLGVT--ILTATKVESIADGG-SQVTVTVTKDG--VAQELKAEKVLQ 265 (464)
T ss_dssp --T-------------TSC--HHHHHHHHHHHHHHTCE--EECSCEEEEEEECS-SCEEEEEESSS--CEEEEEESEEEE
T ss_pred --c-------------ccC--HHHHHHHHHHHHHcCCE--EEeCcEEEEEEEcC-CeEEEEEEcCC--ceEEEEcCEEEE
Confidence 0 001 67778888888889999 99999999998765 45666665 33 234789999999
Q ss_pred ccCCCCCCcc
Q 024975 161 CNGHFSVPRL 170 (259)
Q Consensus 161 AtG~~s~~~~ 170 (259)
|+| ..|+.
T Consensus 266 a~G--~~p~~ 273 (464)
T 2a8x_A 266 AIG--FAPNV 273 (464)
T ss_dssp CSC--EEECC
T ss_pred CCC--CCccC
Confidence 999 45554
No 197
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.96 E-value=5.4e-09 Score=86.08 Aligned_cols=98 Identities=23% Similarity=0.286 Sum_probs=77.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+.
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l------------------------------------------- 185 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVL------------------------------------------- 185 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTT-------------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccc-------------------------------------------
Confidence 3689999999999999999999999999999865320
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEE--eCCCcEEEEEEecCCceEEEEeCEEE
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARL--VESNKWKVKSRKKDDVVEEETFDAVV 159 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~--~~~~~~~v~~~~g~~~~~~~~ad~VI 159 (259)
+ ..++ .++...+.+.+++.|++ ++.+++|+++.. .++....|.+.+|. .+.+|.||
T Consensus 186 --~------------~~~~--~~~~~~l~~~l~~~GV~--i~~~~~v~~i~~~~~~~~v~~v~~~~G~----~i~~D~Vv 243 (431)
T 1q1r_A 186 --E------------RVTA--PPVSAFYEHLHREAGVD--IRTGTQVCGFEMSTDQQKVTAVLCEDGT----RLPADLVI 243 (431)
T ss_dssp --T------------TTSC--HHHHHHHHHHHHHHTCE--EECSCCEEEEEECTTTCCEEEEEETTSC----EEECSEEE
T ss_pred --c------------chhh--HHHHHHHHHHHHhCCeE--EEeCCEEEEEEeccCCCcEEEEEeCCCC----EEEcCEEE
Confidence 0 0011 66777888888889999 999999999987 33233367776654 78999999
Q ss_pred EccCC
Q 024975 160 VCNGH 164 (259)
Q Consensus 160 lAtG~ 164 (259)
+|+|.
T Consensus 244 ~a~G~ 248 (431)
T 1q1r_A 244 AGIGL 248 (431)
T ss_dssp ECCCE
T ss_pred ECCCC
Confidence 99994
No 198
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.96 E-value=5.3e-09 Score=87.31 Aligned_cols=102 Identities=18% Similarity=0.270 Sum_probs=80.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
..+++|||+|+.|+-+|..|.+.|.+|+++++.+.+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l------------------------------------------- 221 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVL------------------------------------------- 221 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSC-------------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccc-------------------------------------------
Confidence 3689999999999999999999999999999975431
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCC-cEEEEEEecCCceEEEEeCEEEE
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESN-KWKVKSRKKDDVVEEETFDAVVV 160 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~-~~~v~~~~g~~~~~~~~ad~VIl 160 (259)
+ .+. .++.+.+.+.+++.|++ ++.+++|++++..+++ ...+.+.+|. ..+.+|.||+
T Consensus 222 --~-------------~~d--~~~~~~l~~~l~~~Gv~--i~~~~~v~~i~~~~~~~~~~v~~~~G~---~~i~~D~vv~ 279 (479)
T 2hqm_A 222 --R-------------KFD--ECIQNTITDHYVKEGIN--VHKLSKIVKVEKNVETDKLKIHMNDSK---SIDDVDELIW 279 (479)
T ss_dssp --T-------------TSC--HHHHHHHHHHHHHHTCE--EECSCCEEEEEECC-CCCEEEEETTSC---EEEEESEEEE
T ss_pred --c-------------ccC--HHHHHHHHHHHHhCCeE--EEeCCEEEEEEEcCCCcEEEEEECCCc---EEEEcCEEEE
Confidence 0 000 67778888888889999 9999999999875422 3667776542 3799999999
Q ss_pred ccCCCCCCcc
Q 024975 161 CNGHFSVPRL 170 (259)
Q Consensus 161 AtG~~s~~~~ 170 (259)
|+| ..|+.
T Consensus 280 a~G--~~p~~ 287 (479)
T 2hqm_A 280 TIG--RKSHL 287 (479)
T ss_dssp CSC--EEECC
T ss_pred CCC--CCCcc
Confidence 999 45554
No 199
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.95 E-value=3.4e-10 Score=95.28 Aligned_cols=41 Identities=32% Similarity=0.400 Sum_probs=38.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHc-CCcEEEEeeCCCcCceee
Q 024975 2 FRHVAVIGAGAAGLVVGHELLRE-GHTVVVYEKGEQVGGSWI 42 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~-g~~v~v~e~~~~~gg~~~ 42 (259)
.+||+|||||++||+||++|+++ |.+|+|+|+++.+||.+.
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~ 51 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLAS 51 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGC
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCee
Confidence 47999999999999999999985 999999999999999764
No 200
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.95 E-value=2.3e-09 Score=88.93 Aligned_cols=101 Identities=25% Similarity=0.307 Sum_probs=77.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
..+++|||+|+.|+.+|..|.+.|.+|+|+|+.+.+.
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l------------------------------------------- 207 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERIL------------------------------------------- 207 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSS-------------------------------------------
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccc-------------------------------------------
Confidence 3689999999999999999999999999999976431
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEc
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlA 161 (259)
+ .+. .++.+++.+.+.+.+++ ++.+++|++++. + + +.+...+| +...+.+|.||+|
T Consensus 208 --~-------------~~~--~~~~~~l~~~l~~~gv~--i~~~~~v~~i~~-~-~-v~v~~~~G--~~~~i~~D~vv~a 263 (458)
T 1lvl_A 208 --P-------------TYD--SELTAPVAESLKKLGIA--LHLGHSVEGYEN-G-C-LLANDGKG--GQLRLEADRVLVA 263 (458)
T ss_dssp --T-------------TSC--HHHHHHHHHHHHHHTCE--EETTCEEEEEET-T-E-EEEECSSS--CCCEECCSCEEEC
T ss_pred --c-------------ccC--HHHHHHHHHHHHHCCCE--EEECCEEEEEEe-C-C-EEEEECCC--ceEEEECCEEEEC
Confidence 0 000 66777888888888999 999999999975 3 3 44442122 2247899999999
Q ss_pred cCCCCCCccC
Q 024975 162 NGHFSVPRLA 171 (259)
Q Consensus 162 tG~~s~~~~~ 171 (259)
+| ..|+.+
T Consensus 264 ~G--~~p~~~ 271 (458)
T 1lvl_A 264 VG--RRPRTK 271 (458)
T ss_dssp CC--EEECCS
T ss_pred cC--CCcCCC
Confidence 99 556554
No 201
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.94 E-value=7.4e-09 Score=84.65 Aligned_cols=93 Identities=22% Similarity=0.312 Sum_probs=75.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+..
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------------------------------------------ 182 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMS------------------------------------------ 182 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST------------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccc------------------------------------------
Confidence 36899999999999999999999999999999753310
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEc
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlA 161 (259)
..++ .++...+.+.+++.|++ ++.+++|+++. + + .|.+.++. .+.+|.||+|
T Consensus 183 ---------------~~~~--~~~~~~l~~~l~~~GV~--i~~~~~v~~i~--~-~--~v~~~~g~----~i~~D~vi~a 234 (408)
T 2gqw_A 183 ---------------RAAP--ATLADFVARYHAAQGVD--LRFERSVTGSV--D-G--VVLLDDGT----RIAADMVVVG 234 (408)
T ss_dssp ---------------TTSC--HHHHHHHHHHHHHTTCE--EEESCCEEEEE--T-T--EEEETTSC----EEECSEEEEC
T ss_pred ---------------cccC--HHHHHHHHHHHHHcCcE--EEeCCEEEEEE--C-C--EEEECCCC----EEEcCEEEEC
Confidence 0011 67778888888889999 99999999998 3 3 56666554 7999999999
Q ss_pred cCC
Q 024975 162 NGH 164 (259)
Q Consensus 162 tG~ 164 (259)
+|.
T Consensus 235 ~G~ 237 (408)
T 2gqw_A 235 IGV 237 (408)
T ss_dssp SCE
T ss_pred cCC
Confidence 994
No 202
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.93 E-value=9.1e-09 Score=86.34 Aligned_cols=100 Identities=19% Similarity=0.159 Sum_probs=79.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+.
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l------------------------------------------- 218 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVL------------------------------------------- 218 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSS-------------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc-------------------------------------------
Confidence 3679999999999999999999999999999975431
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEc
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlA 161 (259)
+ .+. .++.+.+.+.+++.|++ ++.+++|+++...+ +.+.+.+.++. .+.+|.||+|
T Consensus 219 --~-------------~~d--~~~~~~l~~~l~~~GV~--i~~~~~V~~i~~~~-~~v~v~~~~g~----~i~aD~Vv~a 274 (499)
T 1xdi_A 219 --P-------------YED--ADAALVLEESFAERGVR--LFKNARAASVTRTG-AGVLVTMTDGR----TVEGSHALMT 274 (499)
T ss_dssp --C-------------CSS--HHHHHHHHHHHHHTTCE--EETTCCEEEEEECS-SSEEEEETTSC----EEEESEEEEC
T ss_pred --c-------------ccC--HHHHHHHHHHHHHCCCE--EEeCCEEEEEEEeC-CEEEEEECCCc----EEEcCEEEEC
Confidence 0 001 67788888888899999 99999999998765 45666654443 7999999999
Q ss_pred cCCCCCCcc
Q 024975 162 NGHFSVPRL 170 (259)
Q Consensus 162 tG~~s~~~~ 170 (259)
+| ..|+.
T Consensus 275 ~G--~~p~~ 281 (499)
T 1xdi_A 275 IG--SVPNT 281 (499)
T ss_dssp CC--EEECC
T ss_pred CC--CCcCC
Confidence 99 45544
No 203
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.93 E-value=1.9e-08 Score=83.37 Aligned_cols=101 Identities=26% Similarity=0.312 Sum_probs=79.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+.
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l------------------------------------------- 183 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLL------------------------------------------- 183 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS-------------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccc-------------------------------------------
Confidence 3689999999999999999999999999999975331
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEc
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlA 161 (259)
+ ..+. .++.+.+.+.+++.|++ ++.+++|++++..+ +.+.|.++++ .+.+|.||+|
T Consensus 184 --~------------~~~d--~~~~~~l~~~l~~~GV~--i~~~~~v~~i~~~~-~~v~v~~~~g-----~i~aD~Vv~A 239 (452)
T 3oc4_A 184 --P------------KYFD--KEMVAEVQKSLEKQAVI--FHFEETVLGIEETA-NGIVLETSEQ-----EISCDSGIFA 239 (452)
T ss_dssp --T------------TTCC--HHHHHHHHHHHHTTTEE--EEETCCEEEEEECS-SCEEEEESSC-----EEEESEEEEC
T ss_pred --c------------ccCC--HHHHHHHHHHHHHcCCE--EEeCCEEEEEEccC-CeEEEEECCC-----EEEeCEEEEC
Confidence 0 0011 67888888888889999 99999999998765 5556666432 6899999999
Q ss_pred cCCCCCCccC
Q 024975 162 NGHFSVPRLA 171 (259)
Q Consensus 162 tG~~s~~~~~ 171 (259)
+| ..|+..
T Consensus 240 ~G--~~p~~~ 247 (452)
T 3oc4_A 240 LN--LHPQLA 247 (452)
T ss_dssp SC--CBCCCS
T ss_pred cC--CCCChH
Confidence 99 555544
No 204
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.93 E-value=1.1e-08 Score=85.52 Aligned_cols=100 Identities=16% Similarity=0.287 Sum_probs=81.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+.
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l------------------------------------------- 227 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLIL------------------------------------------- 227 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------------------
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccc-------------------------------------------
Confidence 4689999999999999999999999999999875321
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEc
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlA 161 (259)
+ .+. .++...+.+.+++.|++ ++.+++|++++..+ +.+.+.+.++. .+.+|.||+|
T Consensus 228 --~-------------~~~--~~~~~~l~~~l~~~Gv~--i~~~~~V~~i~~~~-~~v~v~~~~g~----~i~aD~Vi~A 283 (484)
T 3o0h_A 228 --R-------------NFD--YDLRQLLNDAMVAKGIS--IIYEATVSQVQSTE-NCYNVVLTNGQ----TICADRVMLA 283 (484)
T ss_dssp --T-------------TSC--HHHHHHHHHHHHHHTCE--EESSCCEEEEEECS-SSEEEEETTSC----EEEESEEEEC
T ss_pred --c-------------ccC--HHHHHHHHHHHHHCCCE--EEeCCEEEEEEeeC-CEEEEEECCCc----EEEcCEEEEe
Confidence 0 000 66778888888889999 99999999998875 56778877654 7999999999
Q ss_pred cCCCCCCcc
Q 024975 162 NGHFSVPRL 170 (259)
Q Consensus 162 tG~~s~~~~ 170 (259)
+| ..|+.
T Consensus 284 ~G--~~p~~ 290 (484)
T 3o0h_A 284 TG--RVPNT 290 (484)
T ss_dssp CC--EEECC
T ss_pred eC--CCcCC
Confidence 99 44443
No 205
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.92 E-value=1.3e-08 Score=84.81 Aligned_cols=97 Identities=20% Similarity=0.182 Sum_probs=79.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHc-CCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceecccccccee
Q 024975 2 FRHVAVIGAGAAGLVVGHELLRE-GHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGF 80 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~-g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (259)
..+++|||+|+.|+.+|..|.+. |.+|+++++.+.+.
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l------------------------------------------ 196 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIM------------------------------------------ 196 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSS------------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCccc------------------------------------------
Confidence 36899999999999999999999 99999999875320
Q ss_pred cCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEE
Q 024975 81 QAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVV 160 (259)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIl 160 (259)
+. .+. .++.+.+.+.+++.|++ ++.+++|+++...+ +.+.+.+.++. .+.+|.||+
T Consensus 197 ---~~------------~~~--~~~~~~l~~~l~~~GV~--i~~~~~v~~i~~~~-~~v~v~~~~g~----~i~aD~Vv~ 252 (472)
T 3iwa_A 197 ---PG------------FTS--KSLSQMLRHDLEKNDVV--VHTGEKVVRLEGEN-GKVARVITDKR----TLDADLVIL 252 (472)
T ss_dssp ---TT------------TSC--HHHHHHHHHHHHHTTCE--EECSCCEEEEEESS-SBEEEEEESSC----EEECSEEEE
T ss_pred ---cc------------ccC--HHHHHHHHHHHHhcCCE--EEeCCEEEEEEccC-CeEEEEEeCCC----EEEcCEEEE
Confidence 00 001 67788888888899999 99999999998754 56777777764 799999999
Q ss_pred ccCC
Q 024975 161 CNGH 164 (259)
Q Consensus 161 AtG~ 164 (259)
|+|.
T Consensus 253 a~G~ 256 (472)
T 3iwa_A 253 AAGV 256 (472)
T ss_dssp CSCE
T ss_pred CCCC
Confidence 9994
No 206
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.91 E-value=1.6e-08 Score=84.24 Aligned_cols=97 Identities=20% Similarity=0.309 Sum_probs=78.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
..+++|||+|+.|+-+|..|.+.|.+|+++++.+.+
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~-------------------------------------------- 211 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLF-------------------------------------------- 211 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTT--------------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCcc--------------------------------------------
Confidence 368999999999999999999999999999997532
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEc
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlA 161 (259)
++ +. .++.+.+.+.+++.|++ ++.+++|+++...+ +.+.+.+++ ..+.+|.||+|
T Consensus 212 -l~--------------~~--~~~~~~l~~~l~~~Gv~--i~~~~~v~~i~~~~-~~~~v~~~~-----~~i~aD~Vv~a 266 (467)
T 1zk7_A 212 -FR--------------ED--PAIGEAVTAAFRAEGIE--VLEHTQASQVAHMD-GEFVLTTTH-----GELRADKLLVA 266 (467)
T ss_dssp -TT--------------SC--HHHHHHHHHHHHHTTCE--EETTCCEEEEEEET-TEEEEEETT-----EEEEESEEEEC
T ss_pred -CC--------------CC--HHHHHHHHHHHHhCCCE--EEcCCEEEEEEEeC-CEEEEEECC-----cEEEcCEEEEC
Confidence 11 00 67778888888889999 99999999998764 556666542 37899999999
Q ss_pred cCCCCCCc
Q 024975 162 NGHFSVPR 169 (259)
Q Consensus 162 tG~~s~~~ 169 (259)
+|. .|+
T Consensus 267 ~G~--~p~ 272 (467)
T 1zk7_A 267 TGR--TPN 272 (467)
T ss_dssp SCE--EES
T ss_pred CCC--CcC
Confidence 994 444
No 207
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.91 E-value=1.7e-08 Score=85.09 Aligned_cols=99 Identities=18% Similarity=0.125 Sum_probs=81.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
+.+++|||||+.|+-+|..+.+.|.+|+|+++...+
T Consensus 223 P~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L-------------------------------------------- 258 (542)
T 4b1b_A 223 PGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVL-------------------------------------------- 258 (542)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSS--------------------------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHhcCCeEEEecccccc--------------------------------------------
Confidence 468999999999999999999999999999874311
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEc
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlA 161 (259)
+.. . .++.+.+...+++.+++ ++.++.+..+...+ +...+.+.++. .+.+|.|++|
T Consensus 259 --~~~-D--------------~ei~~~l~~~l~~~gi~--~~~~~~v~~~~~~~-~~~~v~~~~~~----~~~~D~vLvA 314 (542)
T 4b1b_A 259 --RGF-D--------------QQCAVKVKLYMEEQGVM--FKNGILPKKLTKMD-DKILVEFSDKT----SELYDTVLYA 314 (542)
T ss_dssp --TTS-C--------------HHHHHHHHHHHHHTTCE--EEETCCEEEEEEET-TEEEEEETTSC----EEEESEEEEC
T ss_pred --ccc-c--------------hhHHHHHHHHHHhhcce--eecceEEEEEEecC-CeEEEEEcCCC----eEEEEEEEEc
Confidence 000 0 77888899999999999 99999999999886 66777776654 6889999999
Q ss_pred cCCCCCCcc
Q 024975 162 NGHFSVPRL 170 (259)
Q Consensus 162 tG~~s~~~~ 170 (259)
+| ..|+.
T Consensus 315 vG--R~Pnt 321 (542)
T 4b1b_A 315 IG--RKGDI 321 (542)
T ss_dssp SC--EEESC
T ss_pred cc--ccCCc
Confidence 99 55554
No 208
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.91 E-value=9.2e-09 Score=85.88 Aligned_cols=95 Identities=23% Similarity=0.356 Sum_probs=74.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
.++++|||+|+.|+.+|..|.+.|.+|+++++.+.+..
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~------------------------------------------ 223 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGT------------------------------------------ 223 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTS------------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhh------------------------------------------
Confidence 46899999999999999999999999999999753210
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEc
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlA 161 (259)
.+. .++.+.+.+.+++.|++ ++.+++|+++...+ +.+.+.+++ ..+.+|.||+|
T Consensus 224 ----------------~~~--~~~~~~l~~~l~~~Gv~--i~~~~~v~~i~~~~-~v~~v~~~~-----~~i~~D~vi~a 277 (480)
T 3cgb_A 224 ----------------IYD--GDMAEYIYKEADKHHIE--ILTNENVKAFKGNE-RVEAVETDK-----GTYKADLVLVS 277 (480)
T ss_dssp ----------------SSC--HHHHHHHHHHHHHTTCE--EECSCCEEEEEESS-BEEEEEETT-----EEEECSEEEEC
T ss_pred ----------------cCC--HHHHHHHHHHHHHcCcE--EEcCCEEEEEEcCC-cEEEEEECC-----CEEEcCEEEEC
Confidence 000 67778888888889999 99999999998642 333454432 37999999999
Q ss_pred cCC
Q 024975 162 NGH 164 (259)
Q Consensus 162 tG~ 164 (259)
+|.
T Consensus 278 ~G~ 280 (480)
T 3cgb_A 278 VGV 280 (480)
T ss_dssp SCE
T ss_pred cCC
Confidence 994
No 209
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.89 E-value=1.3e-08 Score=85.76 Aligned_cols=101 Identities=17% Similarity=0.187 Sum_probs=79.3
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceecC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQA 82 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (259)
.+++|||+|..|+.+|..|.+.|.+|+++++.+.+.
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l-------------------------------------------- 250 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLK-------------------------------------------- 250 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT--------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccc--------------------------------------------
Confidence 689999999999999999999999999999975331
Q ss_pred CCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCc---EEEEEEecCCceEEEEeCEEE
Q 024975 83 YPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNK---WKVKSRKKDDVVEEETFDAVV 159 (259)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~---~~v~~~~g~~~~~~~~ad~VI 159 (259)
+ .+. .++.+.+.+.+++.|++ ++.+++|+++...+++. +.|.+.+|. ..+.+|.||
T Consensus 251 -~-------------~~~--~~~~~~l~~~l~~~GV~--i~~~~~V~~i~~~~~~~v~~~~v~~~~G~---~~i~aD~Vv 309 (523)
T 1mo9_A 251 -L-------------IKD--NETRAYVLDRMKEQGME--IISGSNVTRIEEDANGRVQAVVAMTPNGE---MRIETDFVF 309 (523)
T ss_dssp -T-------------CCS--HHHHHHHHHHHHHTTCE--EESSCEEEEEEECTTSBEEEEEEEETTEE---EEEECSCEE
T ss_pred -c-------------ccc--HHHHHHHHHHHHhCCcE--EEECCEEEEEEEcCCCceEEEEEEECCCc---EEEEcCEEE
Confidence 0 001 67788888888899999 99999999998754232 566664431 368999999
Q ss_pred EccCCCCCCcc
Q 024975 160 VCNGHFSVPRL 170 (259)
Q Consensus 160 lAtG~~s~~~~ 170 (259)
+|+| ..|+.
T Consensus 310 ~A~G--~~p~~ 318 (523)
T 1mo9_A 310 LGLG--EQPRS 318 (523)
T ss_dssp ECCC--CEECC
T ss_pred ECcC--CccCC
Confidence 9999 44543
No 210
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.89 E-value=4.5e-08 Score=81.82 Aligned_cols=104 Identities=19% Similarity=0.197 Sum_probs=82.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
..+++|||+|+.|+-+|..|.+.|.+|+++++...+
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l-------------------------------------------- 222 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVL-------------------------------------------- 222 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCSS--------------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCC--------------------------------------------
Confidence 367999999999999999999999999999874210
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecC-CceEEEEeCEEEE
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKD-DVVEEETFDAVVV 160 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~-~~~~~~~ad~VIl 160 (259)
+ .+. .++.+.+.+.+.+.+++ ++.+++|.+++..+++...|.+.++. +....+.+|.||+
T Consensus 223 --~-------------~~d--~~~~~~l~~~l~~~Gv~--i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~ 283 (483)
T 3dgh_A 223 --R-------------GFD--QQMAELVAASMEERGIP--FLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLW 283 (483)
T ss_dssp --T-------------TSC--HHHHHHHHHHHHHTTCC--EEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEE
T ss_pred --c-------------ccC--HHHHHHHHHHHHhCCCE--EEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEE
Confidence 0 000 67778888888899999 99999999998865455778887764 4456799999999
Q ss_pred ccCCCCCCcc
Q 024975 161 CNGHFSVPRL 170 (259)
Q Consensus 161 AtG~~s~~~~ 170 (259)
|+| ..|+.
T Consensus 284 a~G--~~p~~ 291 (483)
T 3dgh_A 284 AIG--RKGLV 291 (483)
T ss_dssp CSC--EEECC
T ss_pred Ccc--cccCc
Confidence 999 44543
No 211
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.89 E-value=1.5e-08 Score=83.90 Aligned_cols=100 Identities=19% Similarity=0.261 Sum_probs=77.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+.
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l------------------------------------------- 185 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVL------------------------------------------- 185 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTT-------------------------------------------
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchh-------------------------------------------
Confidence 3689999999999999999999999999999975330
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEE-EEEEecCCceEEEEeCEEEE
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWK-VKSRKKDDVVEEETFDAVVV 160 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~-v~~~~g~~~~~~~~ad~VIl 160 (259)
+ ..+. .++.+.+.+.+++.|++ ++.+++|+++...+ +.+. +.+ ++ ..+.+|.||+
T Consensus 186 --~------------~~~~--~~~~~~l~~~l~~~Gv~--i~~~~~v~~i~~~~-~~v~~v~~-~g----~~i~~D~vv~ 241 (452)
T 2cdu_A 186 --Y------------KYFD--KEFTDILAKDYEAHGVN--LVLGSKVAAFEEVD-DEIITKTL-DG----KEIKSDIAIL 241 (452)
T ss_dssp --T------------TTSC--HHHHHHHHHHHHHTTCE--EEESSCEEEEEEET-TEEEEEET-TS----CEEEESEEEE
T ss_pred --h------------hhhh--hhHHHHHHHHHHHCCCE--EEcCCeeEEEEcCC-CeEEEEEe-CC----CEEECCEEEE
Confidence 0 0001 67778888888899999 99999999998644 4343 333 33 3789999999
Q ss_pred ccCCCCCCcc
Q 024975 161 CNGHFSVPRL 170 (259)
Q Consensus 161 AtG~~s~~~~ 170 (259)
|+| ..|+.
T Consensus 242 a~G--~~p~~ 249 (452)
T 2cdu_A 242 CIG--FRPNT 249 (452)
T ss_dssp CCC--EEECC
T ss_pred CcC--CCCCH
Confidence 999 45543
No 212
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.88 E-value=1.4e-08 Score=84.98 Aligned_cols=100 Identities=22% Similarity=0.349 Sum_probs=76.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
..+|+|||+|+.|+-+|..|.+.|.+|+++++.+.+.
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l------------------------------------------- 230 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCL------------------------------------------- 230 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTT-------------------------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchh-------------------------------------------
Confidence 3689999999999999999999999999999975330
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEc
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlA 161 (259)
+ ..+. .++.+.+.+.+++.|++ ++.+++|+++.. ++....+.+ ++. .+.+|.||+|
T Consensus 231 --~------------~~~~--~~~~~~l~~~l~~~GV~--i~~~~~v~~i~~-~~~v~~v~~-~g~----~i~~D~Vi~a 286 (490)
T 2bc0_A 231 --A------------GYYD--RDLTDLMAKNMEEHGIQ--LAFGETVKEVAG-NGKVEKIIT-DKN----EYDVDMVILA 286 (490)
T ss_dssp --T------------TTSC--HHHHHHHHHHHHTTTCE--EEETCCEEEEEC-SSSCCEEEE-SSC----EEECSEEEEC
T ss_pred --h------------hHHH--HHHHHHHHHHHHhCCeE--EEeCCEEEEEEc-CCcEEEEEE-CCc----EEECCEEEEC
Confidence 0 0000 67778888888889999 999999999985 323233544 333 7999999999
Q ss_pred cCCCCCCcc
Q 024975 162 NGHFSVPRL 170 (259)
Q Consensus 162 tG~~s~~~~ 170 (259)
+| ..|+.
T Consensus 287 ~G--~~p~~ 293 (490)
T 2bc0_A 287 VG--FRPNT 293 (490)
T ss_dssp CC--EEECC
T ss_pred CC--CCcCh
Confidence 99 45554
No 213
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.88 E-value=2e-08 Score=85.63 Aligned_cols=96 Identities=22% Similarity=0.289 Sum_probs=77.1
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceecC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQA 82 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (259)
.+++|||+|+.|+.+|..|.+.|.+|+++++.+.+.
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------------------- 187 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVM-------------------------------------------- 187 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSC--------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccc--------------------------------------------
Confidence 589999999999999999999999999999975320
Q ss_pred CCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEe------------------CCCcEEEEEE
Q 024975 83 YPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLV------------------ESNKWKVKSR 144 (259)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~------------------~~~~~~v~~~ 144 (259)
+ .+. .++...+.+.+++.|++ ++++++|.++... .++.+.+.+.
T Consensus 188 -~-------------~~~--~~~~~~l~~~l~~~GV~--i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 249 (565)
T 3ntd_A 188 -T-------------PVD--REMAGFAHQAIRDQGVD--LRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLS 249 (565)
T ss_dssp -T-------------TSC--HHHHHHHHHHHHHTTCE--EEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEET
T ss_pred -h-------------hcC--HHHHHHHHHHHHHCCCE--EEeCCeEEEEeccccccccccccccccccccCCCcEEEEEc
Confidence 0 000 67778888888889999 9999999999873 2245666665
Q ss_pred ecCCceEEEEeCEEEEccCC
Q 024975 145 KKDDVVEEETFDAVVVCNGH 164 (259)
Q Consensus 145 ~g~~~~~~~~ad~VIlAtG~ 164 (259)
++. .+.+|.||+|+|.
T Consensus 250 ~g~----~i~~D~vi~a~G~ 265 (565)
T 3ntd_A 250 NGE----LLETDLLIMAIGV 265 (565)
T ss_dssp TSC----EEEESEEEECSCE
T ss_pred CCC----EEEcCEEEECcCC
Confidence 543 7999999999994
No 214
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.87 E-value=4e-08 Score=82.03 Aligned_cols=106 Identities=15% Similarity=0.131 Sum_probs=80.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
..+++|||+|+.|+-+|..|.+.|.+|+++++.+.+.
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l------------------------------------------- 223 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVL------------------------------------------- 223 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC-------------------------------------------
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccc-------------------------------------------
Confidence 3689999999999999999999999999999875331
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCC-cEEEEEEecC-Cce--EEEEeCE
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESN-KWKVKSRKKD-DVV--EEETFDA 157 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~-~~~v~~~~g~-~~~--~~~~ad~ 157 (259)
+ .+. .++.+.+.+.+.+.+++ ++.+++|++++..+++ ...+.+.+.. +.. ..+.+|.
T Consensus 224 --~-------------~~d--~~~~~~~~~~l~~~gv~--i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~ 284 (478)
T 3dk9_A 224 --R-------------SFD--SMISTNCTEELENAGVE--VLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDC 284 (478)
T ss_dssp --T-------------TSC--HHHHHHHHHHHHHTTCE--EETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESE
T ss_pred --c-------------ccC--HHHHHHHHHHHHHCCCE--EEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCE
Confidence 0 000 67778888888889999 9999999999876533 3556665422 222 5789999
Q ss_pred EEEccCCCCCCccC
Q 024975 158 VVVCNGHFSVPRLA 171 (259)
Q Consensus 158 VIlAtG~~s~~~~~ 171 (259)
||+|+| ..|+..
T Consensus 285 vi~a~G--~~p~~~ 296 (478)
T 3dk9_A 285 LLWAIG--RVPNTK 296 (478)
T ss_dssp EEECSC--EEESCT
T ss_pred EEEeec--cccCCC
Confidence 999999 455543
No 215
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.87 E-value=2.8e-08 Score=85.37 Aligned_cols=40 Identities=28% Similarity=0.454 Sum_probs=36.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCcee
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSW 41 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~ 41 (259)
.+||+|||+|++|+++|..|+++|++|+|+|+.+..+|.+
T Consensus 46 ~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~ 85 (623)
T 3pl8_A 46 KYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLK 85 (623)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSS
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCcc
Confidence 3799999999999999999999999999999998777633
No 216
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.86 E-value=1.6e-08 Score=83.99 Aligned_cols=87 Identities=17% Similarity=0.200 Sum_probs=53.1
Q ss_pred hCCceeEEeceeEEEEEEeCCCcEEEEEEec-CCceEEEEeCEEEEccCCCCCCc--cCCCCCCCCCCCceEEcccCCCC
Q 024975 116 FGVDQVVRLHTEVLNARLVESNKWKVKSRKK-DDVVEEETFDAVVVCNGHFSVPR--LAQVPGIDSWPGKQMHSHNYRIP 192 (259)
Q Consensus 116 ~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g-~~~~~~~~ad~VIlAtG~~s~~~--~~~~~g~~~~~~~~~~~~~~~~~ 192 (259)
.+++ ++.+++|++++..+ +.|.|.+.+. +++...+.+|.||+|||. .|+ .+-+.++....+.+.....+...
T Consensus 329 ~~v~--i~~~~~v~~v~~~~-~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~--~p~~~~~~l~~l~~~~g~i~v~~~~~~~ 403 (463)
T 3s5w_A 329 PRHA--FRCMTTVERATATA-QGIELALRDAGSGELSVETYDAVILATGY--ERQLHRQLLEPLAEYLGDHEIGRDYRLQ 403 (463)
T ss_dssp CCSE--EETTEEEEEEEEET-TEEEEEEEETTTCCEEEEEESEEEECCCE--ECCC-CTTTGGGGGGBC--CCCTTSBCC
T ss_pred CCeE--EEeCCEEEEEEecC-CEEEEEEEEcCCCCeEEEECCEEEEeeCC--CCCCccchhHHHHHHhCCcccCcccccc
Confidence 4777 99999999998876 7788988854 355567999999999994 454 33333332211222222222221
Q ss_pred C-CCCCCeEEEEccCc
Q 024975 193 N-PFQDQVVILIGHYA 207 (259)
Q Consensus 193 ~-~~~~~~v~viG~G~ 207 (259)
. .....+|.++|...
T Consensus 404 ~~~~~~~~Ifa~G~~~ 419 (463)
T 3s5w_A 404 TDERCKVAIYAQGFSQ 419 (463)
T ss_dssp BCTTBCSEEEESSCCH
T ss_pred cCCCCCCeEEEcCCCc
Confidence 1 11245688888643
No 217
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.85 E-value=9.6e-08 Score=79.91 Aligned_cols=104 Identities=16% Similarity=0.186 Sum_probs=81.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
..+++|||+|+.|+-+|..|.+.|.+|+++++...+
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l-------------------------------------------- 220 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPL-------------------------------------------- 220 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSS--------------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCccc--------------------------------------------
Confidence 357999999999999999999999999999885310
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecC-CceEEEEeCEEEE
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKD-DVVEEETFDAVVV 160 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~-~~~~~~~ad~VIl 160 (259)
+ .+. .++.+.+.+.+++.+++ ++.++++.++...+++...+.+.+.+ ++...+.+|.||+
T Consensus 221 --~-------------~~d--~~~~~~l~~~l~~~gv~--~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~ 281 (488)
T 3dgz_A 221 --R-------------GFD--QQMSSLVTEHMESHGTQ--FLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLW 281 (488)
T ss_dssp --T-------------TSC--HHHHHHHHHHHHHTTCE--EEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEE
T ss_pred --c-------------cCC--HHHHHHHHHHHHHCCCE--EEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEE
Confidence 0 000 67788888888899999 99999999998755456777777643 3334689999999
Q ss_pred ccCCCCCCcc
Q 024975 161 CNGHFSVPRL 170 (259)
Q Consensus 161 AtG~~s~~~~ 170 (259)
|+| ..|+.
T Consensus 282 a~G--~~p~~ 289 (488)
T 3dgz_A 282 AIG--RVPET 289 (488)
T ss_dssp CSC--EEESC
T ss_pred ccc--CCccc
Confidence 999 45544
No 218
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.82 E-value=2.8e-08 Score=83.18 Aligned_cols=101 Identities=21% Similarity=0.236 Sum_probs=77.3
Q ss_pred CCeEEEECCChHHHHHHHHHHH----cCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceecccccc
Q 024975 2 FRHVAVIGAGAAGLVVGHELLR----EGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPREL 77 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~----~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (259)
..+|+|||+|+.|+-+|..|.+ .|.+|+++++.+.+.
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~--------------------------------------- 220 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNM--------------------------------------- 220 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTT---------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccc---------------------------------------
Confidence 3689999999999999999987 478899998764210
Q ss_pred ceecCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCE
Q 024975 78 MGFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDA 157 (259)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~ 157 (259)
...++ ..+...+.+.+++.|++ ++.+++|+++...+ +...+.+.+|. .+.+|.
T Consensus 221 ------------------~~~l~--~~~~~~~~~~l~~~GV~--v~~~~~V~~i~~~~-~~~~v~l~dG~----~i~aD~ 273 (493)
T 1m6i_A 221 ------------------GKILP--EYLSNWTMEKVRREGVK--VMPNAIVQSVGVSS-GKLLIKLKDGR----KVETDH 273 (493)
T ss_dssp ------------------TTTSC--HHHHHHHHHHHHTTTCE--EECSCCEEEEEEET-TEEEEEETTSC----EEEESE
T ss_pred ------------------cccCC--HHHHHHHHHHHHhcCCE--EEeCCEEEEEEecC-CeEEEEECCCC----EEECCE
Confidence 00111 56777888888888999 99999999998764 55667776654 799999
Q ss_pred EEEccCCCCCCcc
Q 024975 158 VVVCNGHFSVPRL 170 (259)
Q Consensus 158 VIlAtG~~s~~~~ 170 (259)
||+|+| ..|+.
T Consensus 274 Vv~a~G--~~pn~ 284 (493)
T 1m6i_A 274 IVAAVG--LEPNV 284 (493)
T ss_dssp EEECCC--EEECC
T ss_pred EEECCC--CCccH
Confidence 999999 44443
No 219
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.80 E-value=4.4e-08 Score=81.41 Aligned_cols=100 Identities=14% Similarity=0.221 Sum_probs=78.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+.
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l------------------------------------------- 206 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEIL------------------------------------------- 206 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc-------------------------------------------
Confidence 4689999999999999999999999999999975320
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEE-EEecCCceEEEEeCEEEE
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVK-SRKKDDVVEEETFDAVVV 160 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~-~~~g~~~~~~~~ad~VIl 160 (259)
+ .+. .++.+.+.+.+++.|++ ++.+++|.++...+++.+.|. ++++ . +.+|.||+
T Consensus 207 --~-------------~~~--~~~~~~l~~~l~~~Gv~--i~~~~~v~~i~~~~~~~~~v~~~~~g----~-i~aD~Vv~ 262 (463)
T 4dna_A 207 --S-------------RFD--QDMRRGLHAAMEEKGIR--ILCEDIIQSVSADADGRRVATTMKHG----E-IVADQVML 262 (463)
T ss_dssp --T-------------TSC--HHHHHHHHHHHHHTTCE--EECSCCEEEEEECTTSCEEEEESSSC----E-EEESEEEE
T ss_pred --c-------------ccC--HHHHHHHHHHHHHCCCE--EECCCEEEEEEEcCCCEEEEEEcCCC----e-EEeCEEEE
Confidence 0 000 67778888888899999 999999999988653445666 5442 2 89999999
Q ss_pred ccCCCCCCcc
Q 024975 161 CNGHFSVPRL 170 (259)
Q Consensus 161 AtG~~s~~~~ 170 (259)
|+| ..|+.
T Consensus 263 a~G--~~p~~ 270 (463)
T 4dna_A 263 ALG--RMPNT 270 (463)
T ss_dssp CSC--EEESC
T ss_pred eeC--cccCC
Confidence 999 44543
No 220
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.78 E-value=4.8e-09 Score=86.92 Aligned_cols=42 Identities=24% Similarity=0.339 Sum_probs=39.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeee
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIY 43 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~ 43 (259)
.+||+|||||++||++|..|+++|.+|+|+|+++.+||.+..
T Consensus 11 ~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 52 (453)
T 2bcg_G 11 DYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAAS 52 (453)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc
Confidence 379999999999999999999999999999999999988654
No 221
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.78 E-value=4.9e-09 Score=84.12 Aligned_cols=43 Identities=40% Similarity=0.652 Sum_probs=39.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeC-CCcCceeeeC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKG-EQVGGSWIYT 44 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~-~~~gg~~~~~ 44 (259)
.+||+|||||++||++|+.|.++|++|+|+|++ +.+||.+...
T Consensus 44 ~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~ 87 (376)
T 2e1m_A 44 PKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTF 87 (376)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEE
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeee
Confidence 479999999999999999999999999999999 9999987653
No 222
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.77 E-value=1.2e-07 Score=74.72 Aligned_cols=101 Identities=16% Similarity=0.180 Sum_probs=75.9
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceecC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQA 82 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (259)
.+|+|||+|+.|+-+|..|.+.+.+|+++++.+.+.
T Consensus 146 ~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-------------------------------------------- 181 (320)
T 1trb_A 146 QKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFR-------------------------------------------- 181 (320)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC--------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccc--------------------------------------------
Confidence 589999999999999999999999999999864220
Q ss_pred CCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecC--CceEEEEeCEEEE
Q 024975 83 YPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKD--DVVEEETFDAVVV 160 (259)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~--~~~~~~~ad~VIl 160 (259)
....+.+.+.+.+.+.+++ ++++++|+++...+++...|.+.+.. +....+.+|.||+
T Consensus 182 ------------------~~~~~~~~l~~~l~~~gv~--i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~ 241 (320)
T 1trb_A 182 ------------------AEKILIKRLMDKVENGNII--LHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFV 241 (320)
T ss_dssp ------------------CCHHHHHHHHHHHHTSSEE--EECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEE
T ss_pred ------------------cCHHHHHHHHHhcccCCeE--EEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEE
Confidence 0045556666777778998 99999999998765333346666421 2235789999999
Q ss_pred ccCCCCCCc
Q 024975 161 CNGHFSVPR 169 (259)
Q Consensus 161 AtG~~s~~~ 169 (259)
|+| ..|+
T Consensus 242 a~G--~~p~ 248 (320)
T 1trb_A 242 AIG--HSPN 248 (320)
T ss_dssp CSC--EEES
T ss_pred EeC--CCCC
Confidence 999 4444
No 223
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.76 E-value=3e-08 Score=81.76 Aligned_cols=95 Identities=17% Similarity=0.248 Sum_probs=74.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
..+++|||+|+.|+-+|..|.+.|.+|+++++.+.+...
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~----------------------------------------- 185 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKL----------------------------------------- 185 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTT-----------------------------------------
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeecccccc-----------------------------------------
Confidence 358999999999999999999999999999997643100
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEc
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlA 161 (259)
+ . .++.+.+.+.+.+.+++ ++.+++|.+++. ..+.++++. .+.+|.|++|
T Consensus 186 -~----------------d--~~~~~~~~~~l~~~gV~--i~~~~~v~~~~~-----~~v~~~~g~----~~~~D~vl~a 235 (437)
T 4eqs_A 186 -M----------------D--ADMNQPILDELDKREIP--YRLNEEINAING-----NEITFKSGK----VEHYDMIIEG 235 (437)
T ss_dssp -S----------------C--GGGGHHHHHHHHHTTCC--EEESCCEEEEET-----TEEEETTSC----EEECSEEEEC
T ss_pred -c----------------c--chhHHHHHHHhhccceE--EEeccEEEEecC-----CeeeecCCe----EEeeeeEEEE
Confidence 0 0 45566778888889999 999999988752 235666655 7999999999
Q ss_pred cCCCCCCc
Q 024975 162 NGHFSVPR 169 (259)
Q Consensus 162 tG~~s~~~ 169 (259)
+| ..|+
T Consensus 236 ~G--~~Pn 241 (437)
T 4eqs_A 236 VG--THPN 241 (437)
T ss_dssp CC--EEES
T ss_pred ec--eecC
Confidence 99 4554
No 224
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.76 E-value=6.5e-09 Score=85.41 Aligned_cols=42 Identities=38% Similarity=0.621 Sum_probs=38.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHcC-CcEEEEeeCCCcCceeee
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREG-HTVVVYEKGEQVGGSWIY 43 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g-~~v~v~e~~~~~gg~~~~ 43 (259)
.+||+|||||++||++|..|.+.| .+|+|+|+++.+||.+..
T Consensus 6 ~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t 48 (424)
T 2b9w_A 6 DSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHS 48 (424)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCC
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccc
Confidence 479999999999999999999999 899999999999986543
No 225
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.76 E-value=6.2e-09 Score=85.49 Aligned_cols=40 Identities=40% Similarity=0.756 Sum_probs=37.2
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceee
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWI 42 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~ 42 (259)
+||+|||||++||++|++|+++|.+|+|+|+++.+||.+.
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~ 40 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFT 40 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeE
Confidence 4899999999999999999999999999999999987654
No 226
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.75 E-value=4.3e-09 Score=88.71 Aligned_cols=41 Identities=37% Similarity=0.612 Sum_probs=38.3
Q ss_pred CeEEEECCChHHHHHHHHHHHcC-CcEEEEeeCCCcCceeee
Q 024975 3 RHVAVIGAGAAGLVVGHELLREG-HTVVVYEKGEQVGGSWIY 43 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g-~~v~v~e~~~~~gg~~~~ 43 (259)
+||+|||||++||+||..|.+.| .+|+|+|+.+.+||.+..
T Consensus 9 ~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~t 50 (516)
T 1rsg_A 9 KKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQT 50 (516)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCCE
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCceee
Confidence 69999999999999999999999 999999999999987643
No 227
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.75 E-value=7.1e-09 Score=83.85 Aligned_cols=42 Identities=26% Similarity=0.441 Sum_probs=39.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeee
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIY 43 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~ 43 (259)
.+||+|||||++|+++|+.|.+.|.+|+|+|+.+.+||.+..
T Consensus 29 ~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~ 70 (397)
T 3hdq_A 29 GFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYD 70 (397)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCC
T ss_pred CCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccce
Confidence 479999999999999999999999999999999999998764
No 228
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.75 E-value=6e-09 Score=85.60 Aligned_cols=40 Identities=38% Similarity=0.629 Sum_probs=37.2
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceee
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWI 42 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~ 42 (259)
+||+|||||++||++|++|+++|.+|+|+|+++.+||.+.
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~ 40 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRFT 40 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCcee
Confidence 5999999999999999999999999999999999987653
No 229
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.74 E-value=8.3e-09 Score=84.07 Aligned_cols=42 Identities=24% Similarity=0.421 Sum_probs=39.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHc-CCcEEEEeeCCCcCceeee
Q 024975 2 FRHVAVIGAGAAGLVVGHELLRE-GHTVVVYEKGEQVGGSWIY 43 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~-g~~v~v~e~~~~~gg~~~~ 43 (259)
++||+|||||++|+++|+.|.+. |.+|+|+|+++.+||.+..
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~ 49 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYS 49 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCE
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeee
Confidence 48999999999999999999999 9999999999999988754
No 230
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.73 E-value=2.4e-07 Score=78.05 Aligned_cols=104 Identities=14% Similarity=0.212 Sum_probs=77.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
..+++|||+|+.|+-+|..|.+.|.+|+++++.. +
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~-~-------------------------------------------- 244 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRSI-L-------------------------------------------- 244 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-S--------------------------------------------
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEeccc-c--------------------------------------------
Confidence 3579999999999999999999999999998742 1
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCC---CcEEEEEEecCC-ceEEEEeCE
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVES---NKWKVKSRKKDD-VVEEETFDA 157 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~---~~~~v~~~~g~~-~~~~~~ad~ 157 (259)
.+ .+. .++.+.+.+.+.+.+++ ++.+++++.+...++ +...+.....++ +...+.+|.
T Consensus 245 -l~-------------~~d--~~~~~~~~~~l~~~GV~--v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~ 306 (519)
T 3qfa_A 245 -LR-------------GFD--QDMANKIGEHMEEHGIK--FIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNT 306 (519)
T ss_dssp -ST-------------TSC--HHHHHHHHHHHHHTTCE--EEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESE
T ss_pred -cc-------------cCC--HHHHHHHHHHHHHCCCE--EEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCE
Confidence 00 000 67778888888889999 999998888876542 345565554333 234678999
Q ss_pred EEEccCCCCCCcc
Q 024975 158 VVVCNGHFSVPRL 170 (259)
Q Consensus 158 VIlAtG~~s~~~~ 170 (259)
||+|+| ..|+.
T Consensus 307 vi~a~G--~~p~~ 317 (519)
T 3qfa_A 307 VMLAIG--RDACT 317 (519)
T ss_dssp EEECSC--EEESC
T ss_pred EEEecC--CcccC
Confidence 999999 45554
No 231
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.73 E-value=4.4e-08 Score=78.86 Aligned_cols=92 Identities=26% Similarity=0.362 Sum_probs=73.4
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceecC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQA 82 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (259)
.+++|||+|+.|+.+|..|.+.|.+|+++++.+.+..
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------------------------------------------- 180 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG------------------------------------------- 180 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT-------------------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc-------------------------------------------
Confidence 5899999999999999999999999999999753310
Q ss_pred CCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEcc
Q 024975 83 YPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVCN 162 (259)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlAt 162 (259)
+. .++.+++.+.+++.|++ ++.+++|++++ . . .+.++++ . +.+|.||+|+
T Consensus 181 ----------------~~--~~~~~~l~~~l~~~gV~--i~~~~~v~~i~--~-~--~v~~~~g----~-i~~D~vi~a~ 230 (367)
T 1xhc_A 181 ----------------LD--EELSNMIKDMLEETGVK--FFLNSELLEAN--E-E--GVLTNSG----F-IEGKVKICAI 230 (367)
T ss_dssp ----------------CC--HHHHHHHHHHHHHTTEE--EECSCCEEEEC--S-S--EEEETTE----E-EECSCEEEEC
T ss_pred ----------------CC--HHHHHHHHHHHHHCCCE--EEcCCEEEEEE--e-e--EEEECCC----E-EEcCEEEECc
Confidence 01 67778888888889999 99999999986 2 2 3555432 3 8999999999
Q ss_pred CCCCCCc
Q 024975 163 GHFSVPR 169 (259)
Q Consensus 163 G~~s~~~ 169 (259)
| ..|+
T Consensus 231 G--~~p~ 235 (367)
T 1xhc_A 231 G--IVPN 235 (367)
T ss_dssp C--EEEC
T ss_pred C--CCcC
Confidence 9 4454
No 232
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.72 E-value=7.1e-08 Score=82.58 Aligned_cols=94 Identities=22% Similarity=0.274 Sum_probs=75.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+.
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l------------------------------------------- 223 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVM------------------------------------------- 223 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC-------------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccc-------------------------------------------
Confidence 3689999999999999999999999999999865321
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEc
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlA 161 (259)
+. +. .++...+.+.+++.|++ ++.+++|.++.... + .|.+.++. .+.+|.||+|
T Consensus 224 --~~-------------~~--~~~~~~l~~~l~~~GV~--i~~~~~v~~i~~~~-~--~v~~~~g~----~i~~D~Vi~a 277 (588)
T 3ics_A 224 --PP-------------ID--YEMAAYVHEHMKNHDVE--LVFEDGVDALEENG-A--VVRLKSGS----VIQTDMLILA 277 (588)
T ss_dssp --TT-------------SC--HHHHHHHHHHHHHTTCE--EECSCCEEEEEGGG-T--EEEETTSC----EEECSEEEEC
T ss_pred --cc-------------CC--HHHHHHHHHHHHHcCCE--EEECCeEEEEecCC-C--EEEECCCC----EEEcCEEEEc
Confidence 00 00 67778888888889999 99999999997543 3 45565554 7999999999
Q ss_pred cCC
Q 024975 162 NGH 164 (259)
Q Consensus 162 tG~ 164 (259)
+|.
T Consensus 278 ~G~ 280 (588)
T 3ics_A 278 IGV 280 (588)
T ss_dssp SCE
T ss_pred cCC
Confidence 994
No 233
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.72 E-value=1e-07 Score=79.26 Aligned_cols=104 Identities=16% Similarity=0.289 Sum_probs=74.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+.
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l------------------------------------------- 208 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRAL------------------------------------------- 208 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC-------------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCC-------------------------------------------
Confidence 3679999999999999999999999999999975331
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEc
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlA 161 (259)
+.. +. .++.+.+.+.+. ++ ++.+++|+++...+++...+.+++.+++...+.+|.||+|
T Consensus 209 --~~~------------~d--~~~~~~l~~~l~---v~--i~~~~~v~~i~~~~~~~v~v~~~~~~G~~~~i~~D~vi~a 267 (466)
T 3l8k_A 209 --ITL------------ED--QDIVNTLLSILK---LN--IKFNSPVTEVKKIKDDEYEVIYSTKDGSKKSIFTNSVVLA 267 (466)
T ss_dssp --TTS------------CC--HHHHHHHHHHHC---CC--EECSCCEEEEEEEETTEEEEEECCTTSCCEEEEESCEEEC
T ss_pred --CCC------------CC--HHHHHHHHhcCE---EE--EEECCEEEEEEEcCCCcEEEEEEecCCceEEEEcCEEEEC
Confidence 000 00 555555555543 77 9999999999875424456666631233357899999999
Q ss_pred cCCCCCCccC
Q 024975 162 NGHFSVPRLA 171 (259)
Q Consensus 162 tG~~s~~~~~ 171 (259)
+| ..|+..
T Consensus 268 ~G--~~p~~~ 275 (466)
T 3l8k_A 268 AG--RRPVIP 275 (466)
T ss_dssp CC--EEECCC
T ss_pred cC--CCcccc
Confidence 99 555544
No 234
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=98.71 E-value=1.2e-08 Score=86.56 Aligned_cols=35 Identities=29% Similarity=0.411 Sum_probs=32.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHcC-CcEEEEeeCCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREG-HTVVVYEKGEQ 36 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g-~~v~v~e~~~~ 36 (259)
.||++|||||.+|+.+|.+|++.+ .+|+|+|+++.
T Consensus 6 ~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 6 HFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp EEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred cccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 489999999999999999999987 79999999875
No 235
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=98.71 E-value=9.1e-09 Score=87.34 Aligned_cols=70 Identities=14% Similarity=0.089 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHhCCceeEEeceeEEEEEEe----CCCcEEEEEEecCCceEEEEeC-EEEEccCCCCCCccCCCCCC
Q 024975 105 VLRYLQNFAREFGVDQVVRLHTEVLNARLV----ESNKWKVKSRKKDDVVEEETFD-AVVVCNGHFSVPRLAQVPGI 176 (259)
Q Consensus 105 ~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~----~~~~~~v~~~~g~~~~~~~~ad-~VIlAtG~~s~~~~~~~~g~ 176 (259)
...||.....+.++. +..++.|++|..+ ......|++.+.++....+.|+ .||+|+|+...|.++.+.|+
T Consensus 229 a~ayL~p~~~r~NL~--V~t~a~V~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~SPqLL~lSGI 303 (583)
T 3qvp_A 229 AREWLLPNYQRPNLQ--VLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTILEYSGI 303 (583)
T ss_dssp HHHHTTTTTTCTTEE--EECSCEEEEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCTTTHHHHHHHTTB
T ss_pred HHHHHHHhhcCCCcE--EEcCCEEEEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCccCCHHHHHHcCC
Confidence 345665555566787 9999999999987 3233456666434556678887 69999998887876554443
No 236
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.70 E-value=1.4e-08 Score=85.06 Aligned_cols=40 Identities=38% Similarity=0.550 Sum_probs=37.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCcee
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSW 41 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~ 41 (259)
.+||+|||||++||++|+.|.+.|.+|+|+|+.+.+||.+
T Consensus 11 ~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~ 50 (489)
T 2jae_A 11 SHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRV 50 (489)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCce
Confidence 4799999999999999999999999999999999999864
No 237
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.69 E-value=3.6e-07 Score=72.51 Aligned_cols=102 Identities=18% Similarity=0.176 Sum_probs=76.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
..+|+|||+|..|+-+|..|.+.+.+|+++++.+.+.
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~------------------------------------------- 188 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFR------------------------------------------- 188 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCC-------------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccC-------------------------------------------
Confidence 3689999999999999999999999999999864220
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEec-CCceEEEEeCEEEE
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKK-DDVVEEETFDAVVV 160 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g-~~~~~~~~ad~VIl 160 (259)
....+.+.+.+.+.+.+++ ++.+++|.++...+ +...|.+... ++....+.+|.||+
T Consensus 189 -------------------~~~~~~~~l~~~l~~~gv~--v~~~~~v~~i~~~~-~~~~v~~~~~~~g~~~~i~~D~vi~ 246 (335)
T 2zbw_A 189 -------------------AHEASVKELMKAHEEGRLE--VLTPYELRRVEGDE-RVRWAVVFHNQTQEELALEVDAVLI 246 (335)
T ss_dssp -------------------SCHHHHHHHHHHHHTTSSE--EETTEEEEEEEESS-SEEEEEEEETTTCCEEEEECSEEEE
T ss_pred -------------------ccHHHHHHHHhccccCCeE--EecCCcceeEccCC-CeeEEEEEECCCCceEEEecCEEEE
Confidence 0034455666777777999 99999999998742 4335666632 23345789999999
Q ss_pred ccCCCCCCcc
Q 024975 161 CNGHFSVPRL 170 (259)
Q Consensus 161 AtG~~s~~~~ 170 (259)
|+| ..|+.
T Consensus 247 a~G--~~p~~ 254 (335)
T 2zbw_A 247 LAG--YITKL 254 (335)
T ss_dssp CCC--EEEEC
T ss_pred eec--CCCCc
Confidence 999 44543
No 238
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.68 E-value=1.4e-08 Score=81.86 Aligned_cols=41 Identities=29% Similarity=0.497 Sum_probs=38.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceee
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWI 42 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~ 42 (259)
++||+|||||++|+++|.+|.+.|.+|+|+|+++.+||.+.
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~ 41 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAY 41 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGC
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceE
Confidence 47999999999999999999999999999999999998764
No 239
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.68 E-value=4.6e-07 Score=77.72 Aligned_cols=103 Identities=21% Similarity=0.269 Sum_probs=74.4
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceecC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQA 82 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (259)
.+++|||+|+.|+-+|..|.+.|.+|+++++.. + .
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~----l---------------------------------------- 321 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRSI-L----L---------------------------------------- 321 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-S----S----------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECCc-C----c----------------------------------------
Confidence 579999999999999999999999999999851 1 0
Q ss_pred CCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEe-----CC---CcEEEEEEecCCceEEEE
Q 024975 83 YPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLV-----ES---NKWKVKSRKKDDVVEEET 154 (259)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~-----~~---~~~~v~~~~g~~~~~~~~ 154 (259)
+ .+. .++..++.+.+.+.|++ ++.++.++.+... .+ +.+.+.....+++...+.
T Consensus 322 -~-------------~~d--~~~~~~~~~~l~~~gv~--i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~ 383 (598)
T 2x8g_A 322 -R-------------GFD--QQMAEKVGDYMENHGVK--FAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEE 383 (598)
T ss_dssp -T-------------TSC--HHHHHHHHHHHHHTTCE--EEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEE
T ss_pred -C-------------cCC--HHHHHHHHHHHHhCCCE--EEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEecc
Confidence 0 000 56777788888888999 9999988888653 21 334455433233334456
Q ss_pred eCEEEEccCCCCCCcc
Q 024975 155 FDAVVVCNGHFSVPRL 170 (259)
Q Consensus 155 ad~VIlAtG~~s~~~~ 170 (259)
+|.||+|+| ..|+.
T Consensus 384 ~D~vi~a~G--~~p~~ 397 (598)
T 2x8g_A 384 FETVIFAVG--REPQL 397 (598)
T ss_dssp ESEEEECSC--EEECG
T ss_pred CCEEEEEeC--Ccccc
Confidence 999999999 45544
No 240
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.67 E-value=5.9e-08 Score=81.28 Aligned_cols=96 Identities=19% Similarity=0.295 Sum_probs=72.9
Q ss_pred eEEEECCChHHHHHHHHHHHc--------------CCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccc
Q 024975 4 HVAVIGAGAAGLVVGHELLRE--------------GHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSL 69 (259)
Q Consensus 4 ~v~IIG~G~~Gl~~a~~L~~~--------------g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (259)
.++|||||+.|+-+|..|.+. ..+|+++|..+.+-
T Consensus 219 ~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il------------------------------- 267 (502)
T 4g6h_A 219 SIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVL------------------------------- 267 (502)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSS-------------------------------
T ss_pred ceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccc-------------------------------
Confidence 699999999999999998753 36899999976431
Q ss_pred eeccccccceecCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCC-
Q 024975 70 RVNLPRELMGFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDD- 148 (259)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~- 148 (259)
+ .++ .++.+++.+.+++.|++ ++++++|++++. +...+.....++
T Consensus 268 --------------~-------------~~~--~~~~~~~~~~L~~~GV~--v~~~~~v~~v~~---~~~~~~~~~~dg~ 313 (502)
T 4g6h_A 268 --------------N-------------MFE--KKLSSYAQSHLENTSIK--VHLRTAVAKVEE---KQLLAKTKHEDGK 313 (502)
T ss_dssp --------------T-------------TSC--HHHHHHHHHHHHHTTCE--EETTEEEEEECS---SEEEEEEECTTSC
T ss_pred --------------c-------------CCC--HHHHHHHHHHHHhccee--eecCceEEEEeC---CceEEEEEecCcc
Confidence 0 111 78889999999999999 999999999863 334444443332
Q ss_pred -ceEEEEeCEEEEccCC
Q 024975 149 -VVEEETFDAVVVCNGH 164 (259)
Q Consensus 149 -~~~~~~ad~VIlAtG~ 164 (259)
....+.+|.||.|+|.
T Consensus 314 ~~~~~i~ad~viwa~Gv 330 (502)
T 4g6h_A 314 ITEETIPYGTLIWATGN 330 (502)
T ss_dssp EEEEEEECSEEEECCCE
T ss_pred cceeeeccCEEEEccCC
Confidence 2356999999999994
No 241
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.67 E-value=1.2e-08 Score=84.58 Aligned_cols=41 Identities=39% Similarity=0.626 Sum_probs=38.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceee
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWI 42 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~ 42 (259)
.+||+|||||++||++|..|.+.|.+|+|+|+++.+||.+.
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~ 45 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTW 45 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCcee
Confidence 37999999999999999999999999999999999987763
No 242
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.67 E-value=2.2e-07 Score=74.59 Aligned_cols=98 Identities=19% Similarity=0.253 Sum_probs=72.0
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceecC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQA 82 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (259)
.+|+|||+|+.|+-+|..|.+.+.+|+++++.+.+.
T Consensus 164 ~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~-------------------------------------------- 199 (360)
T 3ab1_A 164 KRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQ-------------------------------------------- 199 (360)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCS--------------------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCC--------------------------------------------
Confidence 579999999999999999999999999999864320
Q ss_pred CCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEcc
Q 024975 83 YPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVCN 162 (259)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlAt 162 (259)
+ ...+.+.+.+...+.+++ ++.+++|+++...++....|.+...+++...+.+|.||+|+
T Consensus 200 -~-----------------~~~~~~~l~~~~~~~gv~--i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~ 259 (360)
T 3ab1_A 200 -G-----------------HGKTAHEVERARANGTID--VYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRLLILI 259 (360)
T ss_dssp -S-----------------CSHHHHSSHHHHHHTSEE--EESSEEEEEEEEETTEEEEEEEEETTCCEEEEECSEEEECC
T ss_pred -C-----------------CHHHHHHHHHHhhcCceE--EEcCcCHHHhccCCCceEEEEEEecCCCeEEEeCCEEEECC
Confidence 0 022334455556677888 99999999998764232245555323434579999999999
Q ss_pred CC
Q 024975 163 GH 164 (259)
Q Consensus 163 G~ 164 (259)
|.
T Consensus 260 G~ 261 (360)
T 3ab1_A 260 GF 261 (360)
T ss_dssp CB
T ss_pred CC
Confidence 94
No 243
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.66 E-value=1.3e-07 Score=78.21 Aligned_cols=94 Identities=23% Similarity=0.360 Sum_probs=71.6
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceecC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQA 82 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (259)
.+++|||+|+.|+.+|..|.+.|.+|+++++.+.+...
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 186 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRR------------------------------------------ 186 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchh------------------------------------------
Confidence 58999999999999999999999999999997533100
Q ss_pred CCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEcc
Q 024975 83 YPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVCN 162 (259)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlAt 162 (259)
.+. .++.+.+.+.+.+. ++ ++.++.|.++...+ ....+ ..++ ..+.+|.||+|+
T Consensus 187 ---------------~~~--~~~~~~l~~~l~~~-v~--i~~~~~v~~i~~~~-~v~~v-~~~g----~~i~~D~Vv~a~ 240 (449)
T 3kd9_A 187 ---------------SFD--KEVTDILEEKLKKH-VN--LRLQEITMKIEGEE-RVEKV-VTDA----GEYKAELVILAT 240 (449)
T ss_dssp ---------------TSC--HHHHHHHHHHHTTT-SE--EEESCCEEEEECSS-SCCEE-EETT----EEEECSEEEECS
T ss_pred ---------------hcC--HHHHHHHHHHHHhC-cE--EEeCCeEEEEeccC-cEEEE-EeCC----CEEECCEEEEee
Confidence 011 67777888888777 88 99999999997543 22223 3333 379999999999
Q ss_pred CC
Q 024975 163 GH 164 (259)
Q Consensus 163 G~ 164 (259)
|.
T Consensus 241 G~ 242 (449)
T 3kd9_A 241 GI 242 (449)
T ss_dssp CE
T ss_pred CC
Confidence 94
No 244
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.64 E-value=2.3e-07 Score=74.59 Aligned_cols=107 Identities=13% Similarity=0.192 Sum_probs=73.8
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceecC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQA 82 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (259)
.+|+|||+|+.|+-+|..|.+.|.+|+++++.+.+....
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~~----------------------------------------- 205 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPD----------------------------------------- 205 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECC-------------------------------------------------
T ss_pred CEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCCC-----------------------------------------
Confidence 479999999999999999999999999999975331000
Q ss_pred CCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-CceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEc
Q 024975 83 YPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFG-VDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (259)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlA 161 (259)
++ ....++ ..+.+.+.+.+.+.+ ++ ++.+++|.++...+ +.+.+.+.+|. ....+|.||+|
T Consensus 206 --~d--------~~~~~~--~~~~~~l~~~l~~~g~v~--~~~~~~v~~i~~~~-~~~~v~~~~g~---~~~~~d~vi~a 267 (369)
T 3d1c_A 206 --AD--------PSVRLS--PYTRQRLGNVIKQGARIE--MNVHYTVKDIDFNN-GQYHISFDSGQ---SVHTPHEPILA 267 (369)
T ss_dssp ------------CTTSCC--HHHHHHHHHHHHTTCCEE--EECSCCEEEEEEET-TEEEEEESSSC---CEEESSCCEEC
T ss_pred --CC--------CCccCC--HHHHHHHHHHHhhCCcEE--EecCcEEEEEEecC-CceEEEecCCe---EeccCCceEEe
Confidence 00 000011 556667777777775 88 99999999997654 56677776654 22345999999
Q ss_pred cCCCCCCcc
Q 024975 162 NGHFSVPRL 170 (259)
Q Consensus 162 tG~~s~~~~ 170 (259)
|| ..|+.
T Consensus 268 ~G--~~~~~ 274 (369)
T 3d1c_A 268 TG--FDATK 274 (369)
T ss_dssp CC--BCGGG
T ss_pred ec--cCCcc
Confidence 99 45544
No 245
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.64 E-value=2.1e-08 Score=84.20 Aligned_cols=40 Identities=40% Similarity=0.618 Sum_probs=37.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCcee
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSW 41 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~ 41 (259)
++||+|||||++||++|+.|.+.|++|+|+|+.+.+||.+
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~ 52 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKL 52 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCce
Confidence 4799999999999999999999999999999999998764
No 246
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.64 E-value=2.1e-08 Score=83.68 Aligned_cols=41 Identities=24% Similarity=0.441 Sum_probs=37.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHcC--CcEEEEeeCCCcCceee
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREG--HTVVVYEKGEQVGGSWI 42 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g--~~v~v~e~~~~~gg~~~ 42 (259)
++||+|||||++|+++|++|.+.| .+|+|+|+.+.+||.+.
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~ 46 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVA 46 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCC
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeE
Confidence 589999999999999999999999 99999999999987643
No 247
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.63 E-value=1.8e-08 Score=85.18 Aligned_cols=35 Identities=26% Similarity=0.504 Sum_probs=32.2
Q ss_pred CCeEEEECCChHHHHHHHHHHH-cCCcEEEEeeCCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLR-EGHTVVVYEKGEQ 36 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~-~g~~v~v~e~~~~ 36 (259)
.||++|||+|++|+.+|.+|++ .+.+|+|+|+++.
T Consensus 17 ~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 17 NCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 4899999999999999999998 6789999999865
No 248
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.63 E-value=2.6e-07 Score=73.29 Aligned_cols=94 Identities=16% Similarity=0.214 Sum_probs=69.9
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceecC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQA 82 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (259)
.+++|||+|+.|+.+|..|.+.+.+|+++++.+.+..
T Consensus 174 ~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~------------------------------------------- 210 (338)
T 3itj_A 174 KPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA------------------------------------------- 210 (338)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS-------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC-------------------------------------------
Confidence 6799999999999999999999999999998653200
Q ss_pred CCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHH-hCCceeEEeceeEEEEEEeCCCcEEEEEEec-CCceEEEEeCEEEE
Q 024975 83 YPFVARNYEGSVDLRRYPGHEEVLRYLQNFARE-FGVDQVVRLHTEVLNARLVESNKWKVKSRKK-DDVVEEETFDAVVV 160 (259)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g-~~~~~~~~ad~VIl 160 (259)
.. .+.+.+.+ .+++ ++.+++|.++...+++...|.+.+. ++....+.+|.||+
T Consensus 211 -------------------~~----~~~~~l~~~~gv~--i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~ 265 (338)
T 3itj_A 211 -------------------ST----IMQKRAEKNEKIE--ILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFY 265 (338)
T ss_dssp -------------------CH----HHHHHHHHCTTEE--EECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEE
T ss_pred -------------------CH----HHHHHHHhcCCeE--EeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEE
Confidence 02 22333334 4888 9999999999876533444777662 23345799999999
Q ss_pred ccCC
Q 024975 161 CNGH 164 (259)
Q Consensus 161 AtG~ 164 (259)
|+|.
T Consensus 266 a~G~ 269 (338)
T 3itj_A 266 AIGH 269 (338)
T ss_dssp CSCE
T ss_pred EeCC
Confidence 9994
No 249
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=98.63 E-value=3.2e-08 Score=82.63 Aligned_cols=42 Identities=29% Similarity=0.392 Sum_probs=39.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHcC-CcEEEEeeCCCcCceeee
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREG-HTVVVYEKGEQVGGSWIY 43 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g-~~v~v~e~~~~~gg~~~~ 43 (259)
++||+|||||++||++|++|.+.| .+|+|+|+.+.+||.+..
T Consensus 9 ~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~ 51 (484)
T 4dsg_A 9 TPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRS 51 (484)
T ss_dssp SCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCE
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeee
Confidence 479999999999999999999998 799999999999988765
No 250
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=98.62 E-value=3e-08 Score=80.31 Aligned_cols=42 Identities=29% Similarity=0.652 Sum_probs=39.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeee
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIY 43 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~ 43 (259)
.+||+|||||++|+++|..|.+.|.+|+|+|+++.+||.+..
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~ 44 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYD 44 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCcccc
Confidence 469999999999999999999999999999999999988754
No 251
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.62 E-value=2.5e-08 Score=83.66 Aligned_cols=40 Identities=30% Similarity=0.518 Sum_probs=37.6
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceee
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWI 42 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~ 42 (259)
+||+|||||++||++|..|.+.|++|+|+|+++.+||.+.
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~ 79 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSW 79 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcce
Confidence 7999999999999999999999999999999999997753
No 252
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.61 E-value=2.5e-08 Score=82.07 Aligned_cols=35 Identities=34% Similarity=0.581 Sum_probs=32.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 1 MFRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 1 ~~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
|++||+||||||+|+++|..|+++|++|+|+|+.+
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 45899999999999999999999999999999975
No 253
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.60 E-value=1.8e-07 Score=73.40 Aligned_cols=95 Identities=14% Similarity=0.144 Sum_probs=70.1
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceecC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQA 82 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (259)
.+++|||+|+.|+.+|..|.+.+.+|+++++.+.+ ..
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~----~~--------------------------------------- 184 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANICSKIYLIHRRDEF----RA--------------------------------------- 184 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSC----BS---------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCC----CC---------------------------------------
Confidence 57999999999999999999999999999886532 00
Q ss_pred CCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEcc
Q 024975 83 YPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVCN 162 (259)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlAt 162 (259)
. .. ++.+..++.+++ +++++++.++...++....+.+...+++...+.+|.||+|+
T Consensus 185 -----~--------------~~---~~~~~~~~~gv~--~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~D~vv~a~ 240 (315)
T 3r9u_A 185 -----A--------------PS---TVEKVKKNEKIE--LITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGIFTFV 240 (315)
T ss_dssp -----C--------------HH---HHHHHHHCTTEE--EECSCEEEEEEEETTEEEEEEEECTTSCEEEECCSCEEECS
T ss_pred -----C--------------HH---HHHHHHhcCCeE--EEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeecCeEEEEE
Confidence 0 22 223344567888 99999999998765333346665333444578999999999
Q ss_pred CC
Q 024975 163 GH 164 (259)
Q Consensus 163 G~ 164 (259)
|.
T Consensus 241 G~ 242 (315)
T 3r9u_A 241 GL 242 (315)
T ss_dssp CE
T ss_pred cC
Confidence 94
No 254
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.60 E-value=2.8e-07 Score=72.81 Aligned_cols=97 Identities=23% Similarity=0.218 Sum_probs=69.2
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceecC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQA 82 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (259)
.+++|||+|+.|+-+|..|.+.+.+|+++++.+.+.
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-------------------------------------------- 188 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLR-------------------------------------------- 188 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCC--------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCC--------------------------------------------
Confidence 579999999999999999999999999999864220
Q ss_pred CCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEec-CCceEEEEeCEEEEc
Q 024975 83 YPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKK-DDVVEEETFDAVVVC 161 (259)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g-~~~~~~~~ad~VIlA 161 (259)
. . ..+ ..+..++.+++ ++.+++++++...+ +...|.+.+. +++...+.+|.||+|
T Consensus 189 --~--~--------------~~~---~~~l~~~~gv~--i~~~~~v~~i~~~~-~v~~v~~~~~~~g~~~~i~~D~vi~a 244 (325)
T 2q7v_A 189 --A--N--------------KVA---QARAFANPKMK--FIWDTAVEEIQGAD-SVSGVKLRNLKTGEVSELATDGVFIF 244 (325)
T ss_dssp --S--C--------------HHH---HHHHHTCTTEE--EECSEEEEEEEESS-SEEEEEEEETTTCCEEEEECSEEEEC
T ss_pred --c--c--------------hHH---HHHHHhcCCce--EecCCceEEEccCC-cEEEEEEEECCCCcEEEEEcCEEEEc
Confidence 0 0 222 12222335888 89999999998743 4345666641 233457899999999
Q ss_pred cCCCCCCc
Q 024975 162 NGHFSVPR 169 (259)
Q Consensus 162 tG~~s~~~ 169 (259)
+| ..|+
T Consensus 245 ~G--~~p~ 250 (325)
T 2q7v_A 245 IG--HVPN 250 (325)
T ss_dssp SC--EEES
T ss_pred cC--CCCC
Confidence 99 4444
No 255
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.59 E-value=3.1e-07 Score=72.12 Aligned_cols=99 Identities=12% Similarity=0.058 Sum_probs=69.3
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceecC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQA 82 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (259)
.+|+|||+|+.|+.+|..|.+.+.+|+++++.+.+. .
T Consensus 144 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~----~--------------------------------------- 180 (311)
T 2q0l_A 144 KEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR----C--------------------------------------- 180 (311)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC----S---------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC----C---------------------------------------
Confidence 689999999999999999999999999998864220 0
Q ss_pred CCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEec-CCceEEEEeCEEEEc
Q 024975 83 YPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKK-DDVVEEETFDAVVVC 161 (259)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g-~~~~~~~~ad~VIlA 161 (259)
. ..+. ....++.+++ ++.++++.++...+++...+.+.+. +++...+.+|.||+|
T Consensus 181 -----~--------------~~~~---~~l~~~~gv~--v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a 236 (311)
T 2q0l_A 181 -----A--------------PITL---EHAKNNDKIE--FLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIF 236 (311)
T ss_dssp -----C--------------HHHH---HHHHTCTTEE--EETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEEC
T ss_pred -----C--------------HHHH---HHHhhCCCeE--EEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEEE
Confidence 0 2221 2222235888 8999999999876423234666531 233457899999999
Q ss_pred cCCCCCCcc
Q 024975 162 NGHFSVPRL 170 (259)
Q Consensus 162 tG~~s~~~~ 170 (259)
+| ..|+.
T Consensus 237 ~G--~~p~~ 243 (311)
T 2q0l_A 237 VG--YDVNN 243 (311)
T ss_dssp SC--EEECC
T ss_pred ec--CccCh
Confidence 99 44543
No 256
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.58 E-value=3.6e-07 Score=72.47 Aligned_cols=99 Identities=17% Similarity=0.206 Sum_probs=70.3
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceecC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQA 82 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (259)
.+|+|||+|..|+-+|..|.+.+.+|+++++.+.+.
T Consensus 160 ~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~-------------------------------------------- 195 (333)
T 1vdc_A 160 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFR-------------------------------------------- 195 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCC--------------------------------------------
T ss_pred CeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCC--------------------------------------------
Confidence 589999999999999999999999999999865320
Q ss_pred CCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCC-cE-EEEEEec-CCceEEEEeCEEE
Q 024975 83 YPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESN-KW-KVKSRKK-DDVVEEETFDAVV 159 (259)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~-~~-~v~~~~g-~~~~~~~~ad~VI 159 (259)
. ...+ ..+..++.+++ ++.+++++++...++. .. .+.+.+. ++....+.+|.||
T Consensus 196 -----------------~-~~~~---~~~~~~~~gv~--i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi 252 (333)
T 1vdc_A 196 -----------------A-SKIM---QQRALSNPKID--VIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLF 252 (333)
T ss_dssp -----------------S-CHHH---HHHHHTCTTEE--EECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEE
T ss_pred -----------------c-cHHH---HHHHHhCCCee--EecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEE
Confidence 0 0111 12333456888 8999999999876421 33 3666542 2334579999999
Q ss_pred EccCCCCCCcc
Q 024975 160 VCNGHFSVPRL 170 (259)
Q Consensus 160 lAtG~~s~~~~ 170 (259)
+|+| ..|+.
T Consensus 253 ~a~G--~~p~~ 261 (333)
T 1vdc_A 253 FAIG--HEPAT 261 (333)
T ss_dssp ECSC--EEESC
T ss_pred EEeC--Cccch
Confidence 9999 44443
No 257
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.56 E-value=5.6e-07 Score=70.55 Aligned_cols=94 Identities=21% Similarity=0.255 Sum_probs=68.8
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceecC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQA 82 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (259)
.+|+|||+|+.|+-+|..|.+.+.+|+++++.+.+.
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-------------------------------------------- 180 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK-------------------------------------------- 180 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCC--------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccC--------------------------------------------
Confidence 589999999999999999999999999999864220
Q ss_pred CCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHH-hCCceeEEeceeEEEEEEeCCCcEEEEEEec-CCceEEEEeCEEEE
Q 024975 83 YPFVARNYEGSVDLRRYPGHEEVLRYLQNFARE-FGVDQVVRLHTEVLNARLVESNKWKVKSRKK-DDVVEEETFDAVVV 160 (259)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g-~~~~~~~~ad~VIl 160 (259)
. . . .+.+.+.+ .+++ ++.+++++++...++....+.+.+. +++...+.+|.||+
T Consensus 181 --~--~--------------~----~~~~~l~~~~gv~--v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~ 236 (310)
T 1fl2_A 181 --A--D--------------Q----VLQDKLRSLKNVD--IILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFV 236 (310)
T ss_dssp --S--C--------------H----HHHHHHHTCTTEE--EESSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEE
T ss_pred --c--c--------------H----HHHHHHhhCCCeE--EecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEE
Confidence 0 0 1 22333344 5888 9999999999875422235666653 24446789999999
Q ss_pred ccCC
Q 024975 161 CNGH 164 (259)
Q Consensus 161 AtG~ 164 (259)
|+|.
T Consensus 237 a~G~ 240 (310)
T 1fl2_A 237 QIGL 240 (310)
T ss_dssp CSCE
T ss_pred eeCC
Confidence 9993
No 258
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.55 E-value=6.3e-07 Score=70.57 Aligned_cols=97 Identities=20% Similarity=0.210 Sum_probs=71.4
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceecC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQA 82 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (259)
.+++|||+|+.|+.+|..|.+.+.+|+++++.+.+.
T Consensus 155 ~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~-------------------------------------------- 190 (323)
T 3f8d_A 155 RVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFK-------------------------------------------- 190 (323)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCC--------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCC--------------------------------------------
Confidence 679999999999999999999999999999865320
Q ss_pred CCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEec-CCceEEEEeCEEEEc
Q 024975 83 YPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKK-DDVVEEETFDAVVVC 161 (259)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g-~~~~~~~~ad~VIlA 161 (259)
+ ... ++.+..++.+++ ++.++++.++...+ +...+.+.+. +++...+.+|.||+|
T Consensus 191 -~-----------------~~~---~~~~~~~~~gv~--~~~~~~v~~i~~~~-~~~~v~~~~~~~g~~~~~~~D~vv~a 246 (323)
T 3f8d_A 191 -A-----------------QPI---YVETVKKKPNVE--FVLNSVVKEIKGDK-VVKQVVVENLKTGEIKELNVNGVFIE 246 (323)
T ss_dssp -S-----------------CHH---HHHHHHTCTTEE--EECSEEEEEEEESS-SEEEEEEEETTTCCEEEEECSEEEEC
T ss_pred -c-----------------CHH---HHHHHHhCCCcE--EEeCCEEEEEeccC-ceeEEEEEECCCCceEEEEcCEEEEE
Confidence 0 022 223333345888 99999999998763 5556777762 233457899999999
Q ss_pred cCCCCCCc
Q 024975 162 NGHFSVPR 169 (259)
Q Consensus 162 tG~~s~~~ 169 (259)
+| ..|+
T Consensus 247 ~G--~~p~ 252 (323)
T 3f8d_A 247 IG--FDPP 252 (323)
T ss_dssp CC--EECC
T ss_pred EC--CCCC
Confidence 99 4444
No 259
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.55 E-value=8.4e-08 Score=77.13 Aligned_cols=34 Identities=29% Similarity=0.468 Sum_probs=32.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
++||+|||||++|+++|++|+++|.+|+|+|+..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 4799999999999999999999999999999976
No 260
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=98.54 E-value=5.3e-08 Score=81.70 Aligned_cols=40 Identities=43% Similarity=0.638 Sum_probs=37.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCcee
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSW 41 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~ 41 (259)
++||+|||||++||++|..|.+.|.+|+|+|+.+.+||.+
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~ 72 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRV 72 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCce
Confidence 4799999999999999999999999999999999999875
No 261
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.53 E-value=6.5e-08 Score=79.65 Aligned_cols=43 Identities=19% Similarity=0.264 Sum_probs=39.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYT 44 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~ 44 (259)
.+||+|||+|++|+++|..|.+.|.+|+|+|+++.+||.+...
T Consensus 6 ~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s~ 48 (433)
T 1d5t_A 6 EYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSI 48 (433)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCEE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCcccccccc
Confidence 4799999999999999999999999999999999999886543
No 262
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.52 E-value=6.6e-07 Score=70.49 Aligned_cols=94 Identities=14% Similarity=0.108 Sum_probs=68.6
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceecC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQA 82 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (259)
.+++|||+|+.|+-+|..|.+.+.+|+++++.+.+.
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~-------------------------------------------- 191 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYM-------------------------------------------- 191 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCC--------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccC--------------------------------------------
Confidence 579999999999999999999999999999864220
Q ss_pred CCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEec-CCceEEEEeCEEEEc
Q 024975 83 YPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKK-DDVVEEETFDAVVVC 161 (259)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g-~~~~~~~~ad~VIlA 161 (259)
. ...+ .+.+.+.+++ ++++++|+++...++....+.+.+. ++....+.+|.||+|
T Consensus 192 --~----------------~~~l----~~~l~~~gv~--i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a 247 (319)
T 3cty_A 192 --C----------------ENAY----VQEIKKRNIP--YIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIY 247 (319)
T ss_dssp --S----------------CHHH----HHHHHHTTCC--EECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEEC
T ss_pred --C----------------CHHH----HHHHhcCCcE--EEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEe
Confidence 0 0222 2333467999 9999999999876422335666531 233457899999999
Q ss_pred cCC
Q 024975 162 NGH 164 (259)
Q Consensus 162 tG~ 164 (259)
+|.
T Consensus 248 ~G~ 250 (319)
T 3cty_A 248 VGL 250 (319)
T ss_dssp CCE
T ss_pred eCC
Confidence 994
No 263
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.51 E-value=7.4e-08 Score=78.02 Aligned_cols=86 Identities=13% Similarity=0.193 Sum_probs=68.1
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceecC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQA 82 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (259)
++++|||+|+.|+.+|..|.+.|.+|+++|+.+.+...
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~------------------------------------------ 184 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLER------------------------------------------ 184 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTT------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchh------------------------------------------
Confidence 57999999999999999999999999999997643100
Q ss_pred CCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEcc
Q 024975 83 YPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVCN 162 (259)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlAt 162 (259)
.+. .++..++.+.+++.|++ ++.++++.++ + ..+.+|.||+|+
T Consensus 185 ---------------~~~--~~~~~~~~~~l~~~gV~--~~~~~~v~~i--------------g----~~~~~D~vv~a~ 227 (385)
T 3klj_A 185 ---------------QLD--RDGGLFLKDKLDRLGIK--IYTNSNFEEM--------------G----DLIRSSCVITAV 227 (385)
T ss_dssp ---------------TSC--HHHHHHHHHHHHTTTCE--EECSCCGGGC--------------H----HHHHHSEEEECC
T ss_pred ---------------hcC--HHHHHHHHHHHHhCCCE--EEeCCEEEEc--------------C----eEEecCeEEECc
Confidence 001 67778888888888999 8888877665 2 268899999999
Q ss_pred CCCCCCc
Q 024975 163 GHFSVPR 169 (259)
Q Consensus 163 G~~s~~~ 169 (259)
| ..|+
T Consensus 228 G--~~p~ 232 (385)
T 3klj_A 228 G--VKPN 232 (385)
T ss_dssp C--EEEC
T ss_pred C--cccC
Confidence 9 4554
No 264
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.50 E-value=8.7e-08 Score=79.14 Aligned_cols=42 Identities=19% Similarity=0.343 Sum_probs=38.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeee
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIY 43 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~ 43 (259)
.+||+|||+|++|+++|..|++.|.+|+++|+++.+||.+..
T Consensus 20 ~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~s 61 (475)
T 3p1w_A 20 HYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETAS 61 (475)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCccc
Confidence 379999999999999999999999999999999999987643
No 265
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.47 E-value=4e-07 Score=72.32 Aligned_cols=99 Identities=16% Similarity=0.163 Sum_probs=69.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
..+|+|||+|+.|+-+|..|.+.+.+|+++++.+.+.
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~------------------------------------------- 191 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFR------------------------------------------- 191 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCS-------------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCC-------------------------------------------
Confidence 3689999999999999999999999999999864220
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEec-CCceEEEEeCEEEE
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKK-DDVVEEETFDAVVV 160 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g-~~~~~~~~ad~VIl 160 (259)
. . ..+ ..+..++.+++ ++.+++|+++...+ +...+.+.+. ++....+.+|.||+
T Consensus 192 ---~--~--------------~~~---~~~~~~~~gV~--v~~~~~v~~i~~~~-~~~~v~~~~~~~g~~~~i~~D~vi~ 246 (335)
T 2a87_A 192 ---A--S--------------KIM---LDRARNNDKIR--FLTNHTVVAVDGDT-TVTGLRVRDTNTGAETTLPVTGVFV 246 (335)
T ss_dssp ---S--C--------------TTH---HHHHHHCTTEE--EECSEEEEEEECSS-SCCEEEEEEETTSCCEEECCSCEEE
T ss_pred ---c--c--------------HHH---HHHHhccCCcE--EEeCceeEEEecCC-cEeEEEEEEcCCCceEEeecCEEEE
Confidence 0 0 111 11233457888 89999999998654 3334555532 23335789999999
Q ss_pred ccCCCCCCcc
Q 024975 161 CNGHFSVPRL 170 (259)
Q Consensus 161 AtG~~s~~~~ 170 (259)
|+| ..|+.
T Consensus 247 a~G--~~p~~ 254 (335)
T 2a87_A 247 AIG--HEPRS 254 (335)
T ss_dssp CSC--EEECC
T ss_pred ccC--CccCh
Confidence 999 45543
No 266
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.46 E-value=1.2e-06 Score=69.31 Aligned_cols=93 Identities=16% Similarity=0.110 Sum_probs=70.7
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceecC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQA 82 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (259)
.+++|||+|+.|+.+|..|.+.+.+|+++++.+.+.
T Consensus 155 ~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~-------------------------------------------- 190 (332)
T 3lzw_A 155 RRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFR-------------------------------------------- 190 (332)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCS--------------------------------------------
T ss_pred CEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCC--------------------------------------------
Confidence 579999999999999999999999999998864320
Q ss_pred CCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecC-CceEEEEeCEEEEc
Q 024975 83 YPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKD-DVVEEETFDAVVVC 161 (259)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~-~~~~~~~ad~VIlA 161 (259)
+. ... .+.+.+.+++ ++.++++.++...+ +...+.+.++. ++...+.+|.||+|
T Consensus 191 -~~-----------------~~~----~~~l~~~gv~--~~~~~~v~~i~~~~-~~~~v~~~~~~~g~~~~~~~D~vv~a 245 (332)
T 3lzw_A 191 -AH-----------------EHS----VENLHASKVN--VLTPFVPAELIGED-KIEQLVLEEVKGDRKEILEIDDLIVN 245 (332)
T ss_dssp -SC-----------------HHH----HHHHHHSSCE--EETTEEEEEEECSS-SCCEEEEEETTSCCEEEEECSEEEEC
T ss_pred -cc-----------------HHH----HHHHhcCCeE--EEeCceeeEEecCC-ceEEEEEEecCCCceEEEECCEEEEe
Confidence 00 111 1224567998 99999999998765 45667777633 44567999999999
Q ss_pred cCC
Q 024975 162 NGH 164 (259)
Q Consensus 162 tG~ 164 (259)
+|.
T Consensus 246 ~G~ 248 (332)
T 3lzw_A 246 YGF 248 (332)
T ss_dssp CCE
T ss_pred ecc
Confidence 994
No 267
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=98.44 E-value=1.5e-07 Score=78.48 Aligned_cols=41 Identities=27% Similarity=0.504 Sum_probs=37.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCC-cEEEEeeCCCcCceee
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGH-TVVVYEKGEQVGGSWI 42 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~-~v~v~e~~~~~gg~~~ 42 (259)
.+||+|||||++|+++|..|.+.|. +|+|+|+.+.+||.+.
T Consensus 4 ~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~ 45 (472)
T 1b37_A 4 GPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMH 45 (472)
T ss_dssp -CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCcee
Confidence 5799999999999999999999998 8999999999987653
No 268
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=98.39 E-value=2.4e-07 Score=80.28 Aligned_cols=40 Identities=33% Similarity=0.544 Sum_probs=37.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCcee
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSW 41 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~ 41 (259)
.+||+|||||++|+++|..|.+.|++|+|+|+.+.+||.+
T Consensus 107 ~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~ 146 (662)
T 2z3y_A 107 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRV 146 (662)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTC
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCcc
Confidence 4799999999999999999999999999999999998754
No 269
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.38 E-value=3.8e-07 Score=72.79 Aligned_cols=37 Identities=35% Similarity=0.460 Sum_probs=34.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVG 38 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~g 38 (259)
|+||+|||||++|+.+|..|++.|.+|+|+|+.+..+
T Consensus 1 m~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~ 37 (443)
T 3g5s_A 1 MERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRM 37 (443)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSC
T ss_pred CCCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcC
Confidence 5899999999999999999999999999999987554
No 270
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.37 E-value=2.8e-06 Score=66.65 Aligned_cols=33 Identities=21% Similarity=0.468 Sum_probs=30.8
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
.+++|||+|..|+-+|..|.+.|.+|+++++.+
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~ 185 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKYGSKVIILHRRD 185 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CeEEEECCChHHHHHHHHHHHhCCeeeeecccc
Confidence 689999999999999999999999999999753
No 271
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=98.37 E-value=3e-07 Score=81.25 Aligned_cols=40 Identities=33% Similarity=0.544 Sum_probs=37.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCcee
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSW 41 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~ 41 (259)
.++|+|||||++||++|+.|.++|++|+|||+.+.+||.+
T Consensus 278 ~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~~ 317 (852)
T 2xag_A 278 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRV 317 (852)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCce
Confidence 4799999999999999999999999999999999998753
No 272
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.34 E-value=7.8e-07 Score=69.17 Aligned_cols=84 Identities=14% Similarity=0.052 Sum_probs=63.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceec
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (259)
..+++|||+|+.|+.+|..|.+.| +|+++++.+.
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~--------------------------------------------- 174 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV--------------------------------------------- 174 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC---------------------------------------------
T ss_pred CCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC---------------------------------------------
Confidence 368999999999999999999999 9999987531
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEc
Q 024975 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (259)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlA 161 (259)
.+...+.+.+.+.+++ ++. ++|.++... . .+.+.++. .+.+|.||+|
T Consensus 175 ----------------------~~~~~~~~~l~~~gv~--i~~-~~v~~i~~~---~-~v~~~~g~----~~~~D~vi~a 221 (297)
T 3fbs_A 175 ----------------------EPDADQHALLAARGVR--VET-TRIREIAGH---A-DVVLADGR----SIALAGLFTQ 221 (297)
T ss_dssp ----------------------CCCHHHHHHHHHTTCE--EEC-SCEEEEETT---E-EEEETTSC----EEEESEEEEC
T ss_pred ----------------------CCCHHHHHHHHHCCcE--EEc-ceeeeeecC---C-eEEeCCCC----EEEEEEEEEc
Confidence 0002334556677898 764 788887632 2 66666654 7999999999
Q ss_pred cCC
Q 024975 162 NGH 164 (259)
Q Consensus 162 tG~ 164 (259)
+|.
T Consensus 222 ~G~ 224 (297)
T 3fbs_A 222 PKL 224 (297)
T ss_dssp CEE
T ss_pred cCc
Confidence 994
No 273
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.31 E-value=6.6e-06 Score=71.72 Aligned_cols=97 Identities=23% Similarity=0.165 Sum_probs=69.7
Q ss_pred CeEEEEC--CChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceecccccccee
Q 024975 3 RHVAVIG--AGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGF 80 (259)
Q Consensus 3 ~~v~IIG--~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (259)
.+|+||| +|..|+.+|..|.+.|.+|+++++.+.+.....
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~~-------------------------------------- 565 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWTN-------------------------------------- 565 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGGG--------------------------------------
T ss_pred CEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccccccc--------------------------------------
Confidence 4699999 999999999999999999999998754311000
Q ss_pred cCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEE
Q 024975 81 QAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVV 160 (259)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIl 160 (259)
. ..+...+.+.+++.+++ ++.+++|+++.. +...+.... ++....+.+|.||+
T Consensus 566 -------~--------------~~~~~~l~~~l~~~GV~--i~~~~~V~~i~~---~~~~v~~~~-~~~~~~i~aD~VV~ 618 (690)
T 3k30_A 566 -------N--------------TFEVNRIQRRLIENGVA--RVTDHAVVAVGA---GGVTVRDTY-ASIERELECDAVVM 618 (690)
T ss_dssp -------G--------------GTCHHHHHHHHHHTTCE--EEESEEEEEEET---TEEEEEETT-TCCEEEEECSEEEE
T ss_pred -------c--------------chhHHHHHHHHHHCCCE--EEcCcEEEEEEC---CeEEEEEcc-CCeEEEEECCEEEE
Confidence 0 22235566677788999 999999999873 233333221 12235789999999
Q ss_pred ccCC
Q 024975 161 CNGH 164 (259)
Q Consensus 161 AtG~ 164 (259)
|+|.
T Consensus 619 A~G~ 622 (690)
T 3k30_A 619 VTAR 622 (690)
T ss_dssp ESCE
T ss_pred CCCC
Confidence 9993
No 274
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.30 E-value=3.9e-06 Score=70.71 Aligned_cols=94 Identities=21% Similarity=0.281 Sum_probs=69.1
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceecC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQA 82 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (259)
.+|+|||+|..|+-+|..|++.+.+|+++++.+.+.
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~-------------------------------------------- 391 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK-------------------------------------------- 391 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCC--------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccC--------------------------------------------
Confidence 589999999999999999999999999998864320
Q ss_pred CCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHH-hCCceeEEeceeEEEEEEeCCCcEEEEEEec-CCceEEEEeCEEEE
Q 024975 83 YPFVARNYEGSVDLRRYPGHEEVLRYLQNFARE-FGVDQVVRLHTEVLNARLVESNKWKVKSRKK-DDVVEEETFDAVVV 160 (259)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g-~~~~~~~~ad~VIl 160 (259)
+ . ..+.+.+.+ .+++ ++.+++++++..+++....+.+.+. +++...+.+|.||+
T Consensus 392 -----------------~--~---~~l~~~l~~~~gV~--v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~ 447 (521)
T 1hyu_A 392 -----------------A--D---QVLQDKVRSLKNVD--IILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIFV 447 (521)
T ss_dssp -----------------S--C---HHHHHHHTTCTTEE--EECSEEEEEEEECSSSEEEEEEEETTTCCEEEEECSEEEE
T ss_pred -----------------c--C---HHHHHHHhcCCCcE--EEeCCEEEEEEcCCCcEEEEEEEeCCCCceEEEEcCEEEE
Confidence 0 0 123334444 4788 9999999999875423235666653 24456789999999
Q ss_pred ccCC
Q 024975 161 CNGH 164 (259)
Q Consensus 161 AtG~ 164 (259)
|+|.
T Consensus 448 a~G~ 451 (521)
T 1hyu_A 448 QIGL 451 (521)
T ss_dssp CCCE
T ss_pred CcCC
Confidence 9993
No 275
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=98.12 E-value=1.1e-06 Score=75.92 Aligned_cols=35 Identities=31% Similarity=0.471 Sum_probs=33.4
Q ss_pred CeEEEECCChHHHHHHHHHHHcC--------CcEEEEeeCC-Cc
Q 024975 3 RHVAVIGAGAAGLVVGHELLREG--------HTVVVYEKGE-QV 37 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g--------~~v~v~e~~~-~~ 37 (259)
++|+|||||++||++|+.|.+.| ++|+|||+++ .+
T Consensus 57 ~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 57 YRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 68999999999999999999998 9999999998 88
No 276
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.12 E-value=3.3e-05 Score=60.53 Aligned_cols=34 Identities=21% Similarity=0.393 Sum_probs=31.5
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQ 36 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~ 36 (259)
++++|||||+.|+-+|..|.+.|.+|+|+++.+.
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 179 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDE 179 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEecccc
Confidence 6899999999999999999999999999998653
No 277
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=98.09 E-value=2.9e-06 Score=71.92 Aligned_cols=35 Identities=26% Similarity=0.552 Sum_probs=33.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQ 36 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~ 36 (259)
.+|++|||+|++|+.+|.+|.+.|.+|+|+|+++.
T Consensus 7 ~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 7 PYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGP 41 (546)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred ceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 58999999999999999999999999999999864
No 278
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.05 E-value=2.4e-05 Score=70.71 Aligned_cols=94 Identities=17% Similarity=0.141 Sum_probs=69.3
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCceeeeCCCCCCCCCCCCCCCCCccccccccceeccccccceecC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQA 82 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (259)
.+++|||+|+.|+-+|..|.+.|.+|+|+|+.+.+.
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~-------------------------------------------- 320 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSSIS-------------------------------------------- 320 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCC--------------------------------------------
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccc--------------------------------------------
Confidence 579999999999999999999999999999964220
Q ss_pred CCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceeEEeceeEEEEEEe-CCCcEEEEEEe--c---CCceEEEEeC
Q 024975 83 YPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLV-ESNKWKVKSRK--K---DDVVEEETFD 156 (259)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~-~~~~~~v~~~~--g---~~~~~~~~ad 156 (259)
.. .+.+++.|++ ++.++.|+++... +++...|.+.+ . +++...+.+|
T Consensus 321 --------------------~~-----~~~l~~~GV~--v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D 373 (965)
T 2gag_A 321 --------------------AA-----AAQAVADGVQ--VISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEAD 373 (965)
T ss_dssp --------------------HH-----HHHHHHTTCC--EEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECS
T ss_pred --------------------hh-----HHHHHhCCeE--EEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcC
Confidence 11 2345677999 9999999999874 22333455553 1 1223579999
Q ss_pred EEEEccCCCCCCc
Q 024975 157 AVVVCNGHFSVPR 169 (259)
Q Consensus 157 ~VIlAtG~~s~~~ 169 (259)
.||+|+| ..|+
T Consensus 374 ~Vv~a~G--~~P~ 384 (965)
T 2gag_A 374 VLAVAGG--FNPV 384 (965)
T ss_dssp EEEEECC--EEEC
T ss_pred EEEECCC--cCcC
Confidence 9999999 4454
No 279
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.00 E-value=5.5e-05 Score=62.30 Aligned_cols=55 Identities=13% Similarity=0.007 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCc---eEEEEeCEEEEccCC
Q 024975 105 VLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDV---VEEETFDAVVVCNGH 164 (259)
Q Consensus 105 ~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~---~~~~~ad~VIlAtG~ 164 (259)
....+.+.+++.+++ ++.+++|++++. +...+.....++. ...+.+|.|++|+|.
T Consensus 210 ~~~~~~~~l~~~gI~--~~~~~~v~~v~~---~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~ 267 (437)
T 3sx6_A 210 SKGILTKGLKEEGIE--AYTNCKVTKVED---NKMYVTQVDEKGETIKEMVLPVKFGMMIPAF 267 (437)
T ss_dssp HHHHHHHHHHHTTCE--EECSEEEEEEET---TEEEEEEECTTSCEEEEEEEECSEEEEECCE
T ss_pred HHHHHHHHHHHCCCE--EEcCCEEEEEEC---CeEEEEecccCCccccceEEEEeEEEEcCCC
Confidence 456777788888999 999999999863 3344443222221 357999999999984
No 280
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.99 E-value=6.2e-06 Score=72.30 Aligned_cols=33 Identities=15% Similarity=0.249 Sum_probs=30.9
Q ss_pred CeEEEEC--CChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 3 RHVAVIG--AGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 3 ~~v~IIG--~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
.+|+||| +|..|+-+|..|.+.|.+|+++++.+
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 5899999 99999999999999999999999975
No 281
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.97 E-value=2.7e-05 Score=67.73 Aligned_cols=55 Identities=16% Similarity=0.160 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEccCCCCCCc
Q 024975 105 VLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVCNGHFSVPR 169 (259)
Q Consensus 105 ~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlAtG~~s~~~ 169 (259)
...++.+.+++.|++ ++.+++|+++. + +...+. .+ ++...+.+|.||+|+| ..|+
T Consensus 575 ~~~~~~~~l~~~GV~--v~~~~~v~~i~--~-~~v~~~-~~--G~~~~i~~D~Vi~a~G--~~p~ 629 (671)
T 1ps9_A 575 TGWIHRTTLLSRGVK--MIPGVSYQKID--D-DGLHVV-IN--GETQVLAVDNVVICAG--QEPN 629 (671)
T ss_dssp THHHHHHHHHHTTCE--EECSCEEEEEE--T-TEEEEE-ET--TEEEEECCSEEEECCC--EEEC
T ss_pred cHHHHHHHHHhcCCE--EEeCcEEEEEe--C-CeEEEe-cC--CeEEEEeCCEEEECCC--cccc
Confidence 344566677788999 99999999886 2 334443 33 3335799999999999 4443
No 282
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.96 E-value=4.2e-05 Score=63.31 Aligned_cols=34 Identities=32% Similarity=0.464 Sum_probs=29.3
Q ss_pred CeEEEECCChHHHHHHHHHHHc--------------------CC-cEEEEeeCCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLRE--------------------GH-TVVVYEKGEQ 36 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~--------------------g~-~v~v~e~~~~ 36 (259)
.+|+|||+|..|+-+|..|.+. +. +|+|+++.+.
T Consensus 148 ~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~ 202 (456)
T 1lqt_A 148 ARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGP 202 (456)
T ss_dssp SEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCG
T ss_pred CEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCCh
Confidence 5799999999999999999874 54 8999998753
No 283
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.96 E-value=7.4e-06 Score=69.95 Aligned_cols=41 Identities=27% Similarity=0.454 Sum_probs=38.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcCcee
Q 024975 1 MFRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSW 41 (259)
Q Consensus 1 ~~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~gg~~ 41 (259)
|.||++|||+|..|..+|..|++.|.+|+++|++++.||.|
T Consensus 7 ~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~ 47 (650)
T 1vg0_A 7 SDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNW 47 (650)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGG
T ss_pred CcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCcc
Confidence 35899999999999999999999999999999999999875
No 284
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.95 E-value=4e-06 Score=70.83 Aligned_cols=35 Identities=23% Similarity=0.368 Sum_probs=32.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCc
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQV 37 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~ 37 (259)
.||++|||+|++|+.+|.+|++ +.+|+|+|+++..
T Consensus 26 ~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 26 SYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCG
T ss_pred cccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCc
Confidence 3799999999999999999999 9999999998654
No 285
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.94 E-value=3.8e-05 Score=63.73 Aligned_cols=34 Identities=12% Similarity=0.173 Sum_probs=31.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
.++|+|||+|.+|+-+|..|.+.+.+|+++++.+
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~ 230 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRT 230 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSS
T ss_pred CCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECC
Confidence 3689999999999999999999999999999864
No 286
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.94 E-value=6.8e-05 Score=62.12 Aligned_cols=34 Identities=24% Similarity=0.331 Sum_probs=29.8
Q ss_pred CeEEEECCChHHHHHHHHHH--------------------HcCC-cEEEEeeCCC
Q 024975 3 RHVAVIGAGAAGLVVGHELL--------------------REGH-TVVVYEKGEQ 36 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~--------------------~~g~-~v~v~e~~~~ 36 (259)
.+|+|||+|..|+-+|..|. +.+. +|+|+++.+.
T Consensus 146 ~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~ 200 (460)
T 1cjc_A 146 DTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGP 200 (460)
T ss_dssp SEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred CEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCCh
Confidence 58999999999999999999 5677 7999998753
No 287
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.93 E-value=2.3e-05 Score=64.85 Aligned_cols=33 Identities=24% Similarity=0.493 Sum_probs=29.9
Q ss_pred CeEEEECCChHHHHHHHHHHHcCC-cEEEEeeCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGH-TVVVYEKGE 35 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~-~v~v~e~~~ 35 (259)
++|+|||+|..|+-+|..+.+.|. +|+++++.+
T Consensus 265 k~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~ 298 (456)
T 2vdc_G 265 KHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRD 298 (456)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCC
Confidence 579999999999999999999997 599998864
No 288
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.91 E-value=1.9e-05 Score=66.70 Aligned_cols=35 Identities=34% Similarity=0.417 Sum_probs=32.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQ 36 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~ 36 (259)
.++|+|||+|..|+.+|..|.+.+.+|+++++.+.
T Consensus 178 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 178 GRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred cceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 36899999999999999999999999999999865
No 289
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.87 E-value=1.4e-05 Score=67.11 Aligned_cols=37 Identities=24% Similarity=0.336 Sum_probs=33.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCCcC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVG 38 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~~g 38 (259)
.+|++|||+|++|+.+|.+|.+.|.+|+|+|++...+
T Consensus 5 ~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 5 YVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 4799999999999999999999999999999987543
No 290
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=97.87 E-value=5.7e-06 Score=70.15 Aligned_cols=37 Identities=35% Similarity=0.377 Sum_probs=33.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHH-cCCcEEEEeeCCCc
Q 024975 1 MFRHVAVIGAGAAGLVVGHELLR-EGHTVVVYEKGEQV 37 (259)
Q Consensus 1 ~~~~v~IIG~G~~Gl~~a~~L~~-~g~~v~v~e~~~~~ 37 (259)
+.||++|||||.+|+.+|.+|++ .+.+|+|+|+++..
T Consensus 1 ~~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 1 ADFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp -CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CCcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 36899999999999999999998 68999999998654
No 291
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.85 E-value=5.5e-05 Score=62.15 Aligned_cols=54 Identities=13% Similarity=0.050 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEccCCC
Q 024975 105 VLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVCNGHF 165 (259)
Q Consensus 105 ~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlAtG~~ 165 (259)
+...+.+.+++.+++ ++.+++|++++. +. +.+++.++....+.+|.||+|+|..
T Consensus 202 ~~~~l~~~l~~~GV~--i~~~~~v~~v~~---~~--v~~~~~~~~g~~i~~D~vv~a~G~~ 255 (430)
T 3h28_A 202 SKRLVEDLFAERNID--WIANVAVKAIEP---DK--VIYEDLNGNTHEVPAKFTMFMPSFQ 255 (430)
T ss_dssp HHHHHHHHHHHTTCE--EECSCEEEEECS---SE--EEEECTTSCEEEEECSEEEEECEEE
T ss_pred HHHHHHHHHHHCCCE--EEeCCEEEEEeC---Ce--EEEEecCCCceEEeeeEEEECCCCc
Confidence 556777888888999 999999999853 22 3444322223579999999999953
No 292
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.83 E-value=0.00014 Score=66.23 Aligned_cols=33 Identities=27% Similarity=0.346 Sum_probs=30.2
Q ss_pred CeEEEECCChHHHHHHHHHHHcCC-cEEEEeeCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGH-TVVVYEKGE 35 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~-~v~v~e~~~ 35 (259)
.+|+|||||..|+-+|..|.+.|. +|+++++.+
T Consensus 333 ~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 333 GAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CcEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 489999999999999999999996 899999864
No 293
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.79 E-value=1.9e-05 Score=66.24 Aligned_cols=35 Identities=29% Similarity=0.374 Sum_probs=32.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQ 36 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~ 36 (259)
.+|++|||+|++|+.+|.+|.+.+.+|+|+|++..
T Consensus 11 ~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 45 (507)
T 1coy_A 11 RVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRS 45 (507)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 47999999999999999999999999999999864
No 294
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=97.74 E-value=1.9e-05 Score=66.82 Aligned_cols=36 Identities=28% Similarity=0.377 Sum_probs=33.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHc-CCcEEEEeeCCCc
Q 024975 2 FRHVAVIGAGAAGLVVGHELLRE-GHTVVVYEKGEQV 37 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~-g~~v~v~e~~~~~ 37 (259)
.+|++|||+|++|+.+|.+|.+. +.+|+|+|+....
T Consensus 13 ~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 13 EFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 48999999999999999999998 8999999998654
No 295
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.72 E-value=2.8e-05 Score=66.44 Aligned_cols=36 Identities=31% Similarity=0.353 Sum_probs=33.0
Q ss_pred CCeEEEECCChHHHHHHHHHHH-cCCcEEEEeeCCCc
Q 024975 2 FRHVAVIGAGAAGLVVGHELLR-EGHTVVVYEKGEQV 37 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~-~g~~v~v~e~~~~~ 37 (259)
.+|++|||+|++|+.+|.+|.+ .+.+|+|+|++...
T Consensus 24 ~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 24 TYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 3799999999999999999999 79999999998654
No 296
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=97.72 E-value=9.9e-05 Score=60.95 Aligned_cols=33 Identities=15% Similarity=0.133 Sum_probs=30.5
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCc-EEEEeeCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHT-VVVYEKGE 35 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~-v~v~e~~~ 35 (259)
++|+|||+|.+|+-+|..|.+.+.+ |+++++.+
T Consensus 213 k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~ 246 (447)
T 2gv8_A 213 ESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGG 246 (447)
T ss_dssp CCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred CEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCC
Confidence 6799999999999999999999998 99998864
No 297
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=97.66 E-value=0.00021 Score=58.21 Aligned_cols=52 Identities=8% Similarity=0.122 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEccCCC
Q 024975 103 EEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVCNGHF 165 (259)
Q Consensus 103 ~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlAtG~~ 165 (259)
..+.+.+.+.+++.|++ ++.+++|++++. +. +.++++. .+.+|.||+|+|..
T Consensus 218 ~~~~~~~~~~l~~~gV~--~~~~~~v~~i~~---~~--v~~~~g~----~~~~D~vi~a~G~~ 269 (409)
T 3h8l_A 218 PNSRKAVASIYNQLGIK--LVHNFKIKEIRE---HE--IVDEKGN----TIPADITILLPPYT 269 (409)
T ss_dssp HHHHHHHHHHHHHHTCE--EECSCCEEEECS---SE--EEETTSC----EEECSEEEEECCEE
T ss_pred HHHHHHHHHHHHHCCCE--EEcCCceEEECC---Ce--EEECCCC----EEeeeEEEECCCCC
Confidence 66778888888899999 999999998863 22 5566654 79999999999953
No 298
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=97.66 E-value=6e-05 Score=59.97 Aligned_cols=31 Identities=23% Similarity=0.286 Sum_probs=28.7
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKG 34 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~ 34 (259)
.+|+|||+|..|+-+|..|.+.+ +|+++.+.
T Consensus 164 ~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~ 194 (357)
T 4a9w_A 164 MRVAIIGGGNSGAQILAEVSTVA-ETTWITQH 194 (357)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTS-EEEEECSS
T ss_pred CEEEEECCCcCHHHHHHHHHhhC-CEEEEECC
Confidence 68999999999999999999998 79999886
No 299
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=97.38 E-value=0.00024 Score=48.63 Aligned_cols=34 Identities=32% Similarity=0.408 Sum_probs=31.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
+.+++|+|+|..|..+|..|.+.|.+|+++|+++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4689999999999999999999999999999974
No 300
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=97.38 E-value=0.00027 Score=48.34 Aligned_cols=34 Identities=29% Similarity=0.531 Sum_probs=31.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
..+|+|+|+|..|..+|..|.+.|.+|+++|+++
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 4679999999999999999999999999999975
No 301
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.35 E-value=0.00023 Score=46.88 Aligned_cols=35 Identities=26% Similarity=0.369 Sum_probs=31.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcC-CcEEEEeeCC
Q 024975 1 MFRHVAVIGAGAAGLVVGHELLREG-HTVVVYEKGE 35 (259)
Q Consensus 1 ~~~~v~IIG~G~~Gl~~a~~L~~~g-~~v~v~e~~~ 35 (259)
|+++|+|+|+|..|..++..|.+.| .+|+++++++
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 3568999999999999999999999 8999999864
No 302
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.30 E-value=0.00035 Score=48.66 Aligned_cols=33 Identities=30% Similarity=0.584 Sum_probs=31.0
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
.+|+|+|+|..|..+|..|.+.|.+|+++|+++
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 579999999999999999999999999999864
No 303
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=97.14 E-value=0.00033 Score=50.03 Aligned_cols=32 Identities=28% Similarity=0.213 Sum_probs=30.5
Q ss_pred eEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 199 VVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 199 ~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
+++|||+|++|+++|..|.+.+.+|+++++.+
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~ 34 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGLKVLVLDGGR 34 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 69999999999999999999999999999986
No 304
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=97.13 E-value=0.00067 Score=46.09 Aligned_cols=33 Identities=21% Similarity=0.485 Sum_probs=30.7
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
++|+|||+|..|..+|..|.+.|.+|+++|+++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 579999999999999999999999999999864
No 305
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=97.10 E-value=0.0013 Score=51.21 Aligned_cols=32 Identities=13% Similarity=0.200 Sum_probs=25.3
Q ss_pred CeEEEECCCh-HHHHHHHHHHHcCCcEEEEeeC
Q 024975 3 RHVAVIGAGA-AGLVVGHELLREGHTVVVYEKG 34 (259)
Q Consensus 3 ~~v~IIG~G~-~Gl~~a~~L~~~g~~v~v~e~~ 34 (259)
.+++|||+|. .++.+|..+.+.+.+|+++++.
T Consensus 147 ~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~ 179 (304)
T 4fk1_A 147 QPLIIISENEDHTLHMTKLVYNWSTDLVIATNG 179 (304)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTTCSCEEEECSS
T ss_pred CceeeecCCCchhhhHHHHHHhCCceEEEEecc
Confidence 4678888775 5678888888889999998774
No 306
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=97.09 E-value=0.00062 Score=46.48 Aligned_cols=34 Identities=38% Similarity=0.502 Sum_probs=31.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
+.+|+|+|+|..|..++..|.+.|.+|+++|+++
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4579999999999999999999999999999863
No 307
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.06 E-value=0.001 Score=46.21 Aligned_cols=33 Identities=21% Similarity=0.189 Sum_probs=30.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKG 34 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~ 34 (259)
..+++|+|+|..|..++..|.+.|.+|+++|++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 357999999999999999999999999999996
No 308
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.05 E-value=0.0046 Score=51.77 Aligned_cols=33 Identities=18% Similarity=0.384 Sum_probs=29.2
Q ss_pred CeEEEECCChHHHHHHHHHHHc--CCcEEEEeeCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLRE--GHTVVVYEKGE 35 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~--g~~v~v~e~~~ 35 (259)
++|+|||+|.+|.-++..|++. +.+|+++-+.+
T Consensus 247 KrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~ 281 (501)
T 4b63_A 247 YNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDS 281 (501)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSS
T ss_pred cEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCC
Confidence 6799999999999999999875 67899998864
No 309
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=97.05 E-value=0.00069 Score=53.26 Aligned_cols=35 Identities=37% Similarity=0.571 Sum_probs=31.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 1 MFRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 1 ~~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
|+++|+|||+|.-|.+.|..|.+.|.+|+++++++
T Consensus 1 M~mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 1 MSLNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp --CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 67899999999999999999999999999999975
No 310
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=96.92 E-value=0.00078 Score=52.76 Aligned_cols=35 Identities=37% Similarity=0.545 Sum_probs=30.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 1 MFRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 1 ~~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
|+++|+|||+|.-|.+.|..|.+.|.+|+++++++
T Consensus 1 M~mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 1 MSLRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp ---CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 66899999999999999999999999999999965
No 311
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=96.84 E-value=0.0058 Score=50.06 Aligned_cols=55 Identities=13% Similarity=0.060 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEccCC
Q 024975 103 EEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVCNGH 164 (259)
Q Consensus 103 ~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlAtG~ 164 (259)
....+++.+.+++.|++ ++.++.|++++. +. +.+++.++....+.+|.||+|+|.
T Consensus 200 ~~~~~~l~~~l~~~GV~--~~~~~~v~~v~~---~~--~~~~~~~g~~~~i~~d~vi~~~G~ 254 (430)
T 3hyw_A 200 GASKRLVEDLFAERNID--WIANVAVKAIEP---DK--VIYEDLNGNTHEVPAKFTMFMPSF 254 (430)
T ss_dssp TTHHHHHHHHHHHTTCE--EECSCEEEEECS---SE--EEEECTTSCEEEEECSEEEEECEE
T ss_pred HHHHHHHHHHHHhCCeE--EEeCceEEEEeC---Cc--eEEEeeCCCceEeecceEEEeccC
Confidence 45667788888889999 999999998853 32 344444444568999999999995
No 312
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=96.83 E-value=0.0011 Score=51.50 Aligned_cols=35 Identities=29% Similarity=0.365 Sum_probs=31.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 1 MFRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 1 ~~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
|+++|+|||+|.-|.+.|..|.+.|.+|++++++.
T Consensus 1 M~mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 1 MSLSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred CCcEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 66899999999999999999999999999999974
No 313
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.81 E-value=0.0015 Score=46.70 Aligned_cols=33 Identities=27% Similarity=0.315 Sum_probs=30.8
Q ss_pred CeEEEECCChHHHHHHHHHHHc-CCcEEEEeeCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLRE-GHTVVVYEKGE 35 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~-g~~v~v~e~~~ 35 (259)
.+|+|+|+|..|..+|..|.+. |.+|+++|+++
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 4799999999999999999999 99999999974
No 314
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=96.71 E-value=0.0018 Score=53.39 Aligned_cols=35 Identities=29% Similarity=0.391 Sum_probs=32.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 1 MFRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 1 ~~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
|+++|.|||+|..|+.+|..|++.|++|+++|+++
T Consensus 1 M~mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 1 MSLDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 55799999999999999999999999999999974
No 315
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=96.69 E-value=0.0022 Score=51.27 Aligned_cols=35 Identities=20% Similarity=0.376 Sum_probs=32.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQ 36 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~ 36 (259)
|++|+|||||..|..++..+.+.|++++++|.++.
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 68999999999999999999999999999998753
No 316
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=96.64 E-value=0.0019 Score=47.73 Aligned_cols=32 Identities=22% Similarity=0.384 Sum_probs=30.5
Q ss_pred eEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 4 HVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 4 ~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
+|+|+|+|..|..+|..|.+.|.+|+++|+++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 69999999999999999999999999999875
No 317
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=96.63 E-value=0.0022 Score=50.12 Aligned_cols=35 Identities=29% Similarity=0.392 Sum_probs=31.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 1 MFRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 1 ~~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
+|.+|+|||+|..|...|..|.+.|.+|+++++++
T Consensus 2 ~~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 2 NAMKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 35689999999999999999999999999999863
No 318
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=96.61 E-value=0.0023 Score=52.85 Aligned_cols=33 Identities=24% Similarity=0.342 Sum_probs=31.2
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
++|+|||.|.+|+++|..|.++|.+|+++|...
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 689999999999999999999999999999964
No 319
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=96.58 E-value=0.0028 Score=49.30 Aligned_cols=34 Identities=38% Similarity=0.620 Sum_probs=31.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
+.+|.|||+|.-|..+|..|.+.|++|+++|+++
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4679999999999999999999999999999864
No 320
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.56 E-value=0.0029 Score=46.69 Aligned_cols=33 Identities=27% Similarity=0.337 Sum_probs=30.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKG 34 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~ 34 (259)
.+.|+|||||..|...+..|.+.|.+|+|+++.
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 368999999999999999999999999999985
No 321
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=96.56 E-value=0.003 Score=48.67 Aligned_cols=33 Identities=24% Similarity=0.467 Sum_probs=31.2
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
.+|.|||+|.-|...|..|++.|++|+++|+++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 689999999999999999999999999999874
No 322
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=96.53 E-value=0.0032 Score=49.21 Aligned_cols=35 Identities=29% Similarity=0.436 Sum_probs=31.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCC-cEEEEeeCC
Q 024975 1 MFRHVAVIGAGAAGLVVGHELLREGH-TVVVYEKGE 35 (259)
Q Consensus 1 ~~~~v~IIG~G~~Gl~~a~~L~~~g~-~v~v~e~~~ 35 (259)
|+.+|+|||+|..|..+|..|...|. +++++|.++
T Consensus 1 M~~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 1 MRKKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 56799999999999999999999986 999999864
No 323
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=96.53 E-value=0.0033 Score=50.62 Aligned_cols=33 Identities=30% Similarity=0.335 Sum_probs=31.2
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
.+|+|||+|+.|+.+|..|...|.+|+++|+++
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 589999999999999999999999999999975
No 324
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=96.52 E-value=0.0028 Score=49.49 Aligned_cols=34 Identities=29% Similarity=0.429 Sum_probs=31.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 1 MFRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 1 ~~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
|+++|+|||+|.-|.+.|..|. .|.+|+++++++
T Consensus 1 M~mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 1 MSLKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 6789999999999999999999 999999999874
No 325
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=96.51 E-value=0.0014 Score=49.73 Aligned_cols=32 Identities=25% Similarity=0.417 Sum_probs=30.6
Q ss_pred eEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 199 VVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 199 ~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
.|+|||+|++|+-+|..|.+.|.+|+++.+.+
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~ 35 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 59999999999999999999999999999887
No 326
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=96.51 E-value=0.0037 Score=49.21 Aligned_cols=35 Identities=23% Similarity=0.359 Sum_probs=31.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCC-cEEEEeeCCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGH-TVVVYEKGEQ 36 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~-~v~v~e~~~~ 36 (259)
+.+|+|||+|..|.++|..|++.|+ +|+++|.++.
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~ 49 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEG 49 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHH
Confidence 4589999999999999999999998 9999999754
No 327
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=96.48 E-value=0.0039 Score=45.72 Aligned_cols=35 Identities=29% Similarity=0.551 Sum_probs=31.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQ 36 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~ 36 (259)
+.+|.|||+|..|.++|..|.+.|.+|+++++++.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 46799999999999999999999999999998753
No 328
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=96.47 E-value=0.0029 Score=48.27 Aligned_cols=34 Identities=21% Similarity=0.336 Sum_probs=31.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
.+.|+|||+|..|...+..|.+.|.+|+|+++..
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 3679999999999999999999999999999864
No 329
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=96.46 E-value=0.0034 Score=49.21 Aligned_cols=34 Identities=29% Similarity=0.439 Sum_probs=31.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCC--cEEEEeeCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGH--TVVVYEKGE 35 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~--~v~v~e~~~ 35 (259)
+.+|+|||+|..|.++|..|.+.|. +|+++|++.
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4689999999999999999999998 999999874
No 330
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=96.45 E-value=0.0023 Score=52.63 Aligned_cols=35 Identities=29% Similarity=0.340 Sum_probs=31.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQ 36 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~ 36 (259)
.++|+|||.|.+|+++|..|.++|++|+++|....
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~ 39 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMT 39 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSS
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCC
Confidence 36799999999999999999999999999998754
No 331
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=96.45 E-value=0.0035 Score=49.54 Aligned_cols=35 Identities=29% Similarity=0.482 Sum_probs=31.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 1 MFRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 1 ~~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
|+.+|.|||+|.-|.+.|..|.+.|.+|+++++.+
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 56899999999999999999999999999999863
No 332
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=96.40 E-value=0.004 Score=48.65 Aligned_cols=33 Identities=21% Similarity=0.354 Sum_probs=31.1
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
.+|+|||+|.-|...|..++..|++|+++|.++
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 579999999999999999999999999999864
No 333
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=96.36 E-value=0.0039 Score=47.90 Aligned_cols=36 Identities=17% Similarity=0.285 Sum_probs=32.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCC
Q 024975 1 MFRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQ 36 (259)
Q Consensus 1 ~~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~ 36 (259)
||++|+|.|+|..|..++..|.+.|.+|+++.+++.
T Consensus 4 m~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (286)
T 3ius_A 4 MTGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPD 39 (286)
T ss_dssp -CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGG
T ss_pred CcCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChh
Confidence 578999999999999999999999999999998753
No 334
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=96.34 E-value=0.0038 Score=49.85 Aligned_cols=33 Identities=27% Similarity=0.330 Sum_probs=31.1
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
.+|+|||+|..|+.+|..|...|.+|+++|+++
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 589999999999999999999999999999974
No 335
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=96.34 E-value=0.0044 Score=48.54 Aligned_cols=34 Identities=21% Similarity=0.321 Sum_probs=31.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
+.+|.|||+|.-|.+.|..|++.|++|+++|+++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3689999999999999999999999999999974
No 336
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=96.33 E-value=0.0023 Score=47.69 Aligned_cols=32 Identities=25% Similarity=0.204 Sum_probs=30.3
Q ss_pred CeEEEEccCcCHHHHHHHHhcccCeEEEEecC
Q 024975 198 QVVILIGHYASGLDIKRDLAGFAKEVHIASRS 229 (259)
Q Consensus 198 ~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~ 229 (259)
.+|+|||+|++|+++|..|.+.+.+|+++++.
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~ 35 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQKGVRVGLLTQS 35 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEecC
Confidence 46999999999999999999999999999997
No 337
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=96.33 E-value=0.0048 Score=48.66 Aligned_cols=34 Identities=29% Similarity=0.393 Sum_probs=31.2
Q ss_pred CeEEEECCChHHHHHHHHHHHcCC-cEEEEeeCCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGH-TVVVYEKGEQ 36 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~-~v~v~e~~~~ 36 (259)
.+|+|||+|..|.++|..|++.|+ +|+++|.++.
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~ 44 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKG 44 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 589999999999999999999998 9999999753
No 338
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=96.33 E-value=0.0035 Score=49.13 Aligned_cols=35 Identities=23% Similarity=0.302 Sum_probs=32.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcC-CcEEEEeeCC
Q 024975 1 MFRHVAVIGAGAAGLVVGHELLREG-HTVVVYEKGE 35 (259)
Q Consensus 1 ~~~~v~IIG~G~~Gl~~a~~L~~~g-~~v~v~e~~~ 35 (259)
|+.+|.|||+|.-|..+|..|.+.| .+|+++|+++
T Consensus 23 M~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 23 MMTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred cCCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 4578999999999999999999999 9999999974
No 339
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.32 E-value=0.0015 Score=48.17 Aligned_cols=40 Identities=10% Similarity=0.195 Sum_probs=35.7
Q ss_pred CCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCCCcc
Q 024975 194 PFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVADE 233 (259)
Q Consensus 194 ~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~ 233 (259)
+..+++|+|||+|.+|.-.+..|.+.|..|+++.+...++
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~ 67 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAE 67 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHH
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHH
Confidence 4568999999999999999999999999999999877544
No 340
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=96.30 E-value=0.0033 Score=48.76 Aligned_cols=36 Identities=28% Similarity=0.504 Sum_probs=29.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCC
Q 024975 1 MFRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQ 36 (259)
Q Consensus 1 ~~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~ 36 (259)
|+.+|.+||.|.-|...|..|.+.|++|+++|+++.
T Consensus 4 Ms~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~ 39 (297)
T 4gbj_A 4 MSEKIAFLGLGNLGTPIAEILLEAGYELVVWNRTAS 39 (297)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHTTCEEEEC-----
T ss_pred CCCcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 567899999999999999999999999999998753
No 341
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=96.29 E-value=0.005 Score=48.11 Aligned_cols=35 Identities=26% Similarity=0.504 Sum_probs=32.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQ 36 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~ 36 (259)
|.+|.|||.|.-|...|..|.+.|++|+++|+++.
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 46899999999999999999999999999999753
No 342
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=96.28 E-value=0.0056 Score=48.20 Aligned_cols=35 Identities=17% Similarity=0.248 Sum_probs=31.4
Q ss_pred CCeEEEECCChHHHH-HHHHHHHcCCcEEEEeeCCC
Q 024975 2 FRHVAVIGAGAAGLV-VGHELLREGHTVVVYEKGEQ 36 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~-~a~~L~~~g~~v~v~e~~~~ 36 (259)
+++|.|||.|.+|++ +|..|.++|.+|.+.|+.+.
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 578999999999996 78889999999999999753
No 343
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=96.28 E-value=0.0051 Score=48.63 Aligned_cols=33 Identities=30% Similarity=0.619 Sum_probs=30.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKG 34 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~ 34 (259)
+.+|+|||+|.-|.++|..|.+.|.+|+++++.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 368999999999999999999999999999985
No 344
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=96.28 E-value=0.0056 Score=47.17 Aligned_cols=33 Identities=30% Similarity=0.464 Sum_probs=30.9
Q ss_pred eEEEECCChHHHHHHHHHHHcCCcEEEEeeCCC
Q 024975 4 HVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQ 36 (259)
Q Consensus 4 ~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~ 36 (259)
+|.|||+|..|...|..|.+.|.+|+++++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 699999999999999999999999999999754
No 345
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=96.27 E-value=0.0052 Score=49.06 Aligned_cols=34 Identities=35% Similarity=0.464 Sum_probs=31.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCC-cEEEEeeCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGH-TVVVYEKGE 35 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~-~v~v~e~~~ 35 (259)
..+|+|+|||.+|+.+|..|...|. +|+++|++.
T Consensus 188 d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 188 EVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred ccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 3589999999999999999999999 999999973
No 346
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=96.26 E-value=0.0053 Score=48.12 Aligned_cols=34 Identities=29% Similarity=0.459 Sum_probs=31.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCC-cEEEEeeCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGH-TVVVYEKGE 35 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~-~v~v~e~~~ 35 (259)
+.+|+|||+|..|.++|..|.+.|+ +|+++|+++
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 3589999999999999999999998 999999975
No 347
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=96.23 E-value=0.0056 Score=47.64 Aligned_cols=34 Identities=24% Similarity=0.336 Sum_probs=31.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
+.+|.|||+|.-|...|..|.+.|++|+++|+++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4689999999999999999999999999999874
No 348
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=96.21 E-value=0.0062 Score=45.86 Aligned_cols=35 Identities=14% Similarity=0.373 Sum_probs=32.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCC----cEEEEeeCC
Q 024975 1 MFRHVAVIGAGAAGLVVGHELLREGH----TVVVYEKGE 35 (259)
Q Consensus 1 ~~~~v~IIG~G~~Gl~~a~~L~~~g~----~v~v~e~~~ 35 (259)
|+++|.|||+|.-|.+.|..|.+.|+ +|.++|+++
T Consensus 1 M~~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 1 MDKQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 66799999999999999999999998 999999864
No 349
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=96.21 E-value=0.0054 Score=50.77 Aligned_cols=35 Identities=14% Similarity=0.381 Sum_probs=32.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHc-CC-cEEEEeeCCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLRE-GH-TVVVYEKGEQ 36 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~-g~-~v~v~e~~~~ 36 (259)
+++|+|||+|.-|+.+|..|++. |+ +|+++|+++.
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 46899999999999999999999 99 9999999865
No 350
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=96.20 E-value=0.0055 Score=50.08 Aligned_cols=34 Identities=29% Similarity=0.469 Sum_probs=31.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
|.+|+|||.|..|+.+|..|++.|++|+.+|.++
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 5789999999999999999999999999999874
No 351
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=96.19 E-value=0.0045 Score=52.36 Aligned_cols=34 Identities=24% Similarity=0.439 Sum_probs=32.1
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQ 36 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~ 36 (259)
++|+|||+|+.|+.+|..|.+.+.+|+++++.+.
T Consensus 186 krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 186 KRVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred CeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 6899999999999999999999999999999875
No 352
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=96.18 E-value=0.0042 Score=48.20 Aligned_cols=34 Identities=21% Similarity=0.267 Sum_probs=31.8
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQ 36 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~ 36 (259)
.+|.|||.|.-|...|..|.+.|++|+++|+++.
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 5899999999999999999999999999999764
No 353
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=96.18 E-value=0.0056 Score=50.82 Aligned_cols=34 Identities=32% Similarity=0.561 Sum_probs=31.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
+.+|+|||+|..|+.+|..|++.|.+|+++|+++
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4689999999999999999999999999999863
No 354
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=96.18 E-value=0.0055 Score=51.90 Aligned_cols=35 Identities=20% Similarity=0.425 Sum_probs=32.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQ 36 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~ 36 (259)
.++|+|||+|..|+.+|..|.+.+.+|++|++.+.
T Consensus 191 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 191 GKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 36899999999999999999999999999999875
No 355
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=96.17 E-value=0.0045 Score=49.77 Aligned_cols=36 Identities=11% Similarity=0.189 Sum_probs=32.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcC-------CcEEEEeeCCC
Q 024975 1 MFRHVAVIGAGAAGLVVGHELLREG-------HTVVVYEKGEQ 36 (259)
Q Consensus 1 ~~~~v~IIG~G~~Gl~~a~~L~~~g-------~~v~v~e~~~~ 36 (259)
|+.+|.|||+|.-|.++|..|.+.| .+|+++++++.
T Consensus 20 ~~~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 20 GPLKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp SCBCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 4568999999999999999999999 89999998754
No 356
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=96.17 E-value=0.0021 Score=53.71 Aligned_cols=33 Identities=18% Similarity=0.168 Sum_probs=30.8
Q ss_pred CeEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 198 QVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 198 ~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
|+|+|||+|.+|+-.|..|++.|.+|+++++++
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~ 34 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRD 34 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCC
Confidence 679999999999999999999999999999988
No 357
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=96.17 E-value=0.0042 Score=47.92 Aligned_cols=35 Identities=23% Similarity=0.455 Sum_probs=32.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQ 36 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~ 36 (259)
|.+|.|||.|.-|...|..|.+.|++|+++|+++.
T Consensus 1 M~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 1 MTTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CCCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred CCeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 46899999999999999999999999999999753
No 358
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=96.16 E-value=0.0073 Score=45.42 Aligned_cols=34 Identities=26% Similarity=0.412 Sum_probs=31.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
.++|.|||+|.-|.++|..|.+.|++|+++++++
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 4689999999999999999999999999999864
No 359
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=96.10 E-value=0.0077 Score=46.43 Aligned_cols=34 Identities=24% Similarity=0.411 Sum_probs=31.4
Q ss_pred CCeEEEECC-ChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 2 FRHVAVIGA-GAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 2 ~~~v~IIG~-G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
+.+|.|||+ |..|..+|..|.+.|.+|+++++++
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 468999999 9999999999999999999999864
No 360
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=96.09 E-value=0.0072 Score=48.16 Aligned_cols=33 Identities=36% Similarity=0.375 Sum_probs=30.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCC-cEEEEeeC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGH-TVVVYEKG 34 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~-~v~v~e~~ 34 (259)
..+|+|+|||.+|+.+|..|...|. +|+++|+.
T Consensus 192 ~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 192 EVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 3689999999999999999999998 89999996
No 361
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=96.09 E-value=0.003 Score=46.68 Aligned_cols=34 Identities=24% Similarity=0.445 Sum_probs=30.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEE-EeeCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVV-YEKGE 35 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v-~e~~~ 35 (259)
|.+|.|||+|..|.++|..|.+.|.+|++ +++++
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 56899999999999999999999999998 88764
No 362
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=96.08 E-value=0.013 Score=48.86 Aligned_cols=59 Identities=15% Similarity=0.017 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHhC-CceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEccCCCCCC
Q 024975 103 EEVLRYLQNFAREFG-VDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVCNGHFSVP 168 (259)
Q Consensus 103 ~~~~~~l~~~~~~~~-~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlAtG~~s~~ 168 (259)
..+.+.+.+.+.+.+ ++ ++++++|++|+..+ +.+.|.+.++. .+.||+||+|+|.....
T Consensus 255 ~~l~~~l~~~l~~~g~~~--i~~~~~V~~i~~~~-~~v~v~~~~g~----~~~ad~vI~a~~~~~l~ 314 (495)
T 2vvm_A 255 SAFARRFWEEAAGTGRLG--YVFGCPVRSVVNER-DAARVTARDGR----EFVAKRVVCTIPLNVLS 314 (495)
T ss_dssp HHHHHHHHHHHHTTTCEE--EESSCCEEEEEECS-SSEEEEETTCC----EEEEEEEEECCCGGGGG
T ss_pred HHHHHHHHHHhhhcCceE--EEeCCEEEEEEEcC-CEEEEEECCCC----EEEcCEEEECCCHHHHh
Confidence 455666666666666 77 99999999999876 67888877654 68999999999975443
No 363
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=96.07 E-value=0.0063 Score=47.31 Aligned_cols=34 Identities=26% Similarity=0.518 Sum_probs=31.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
|.+|.|||+|..|...|..|.+.|++|+++|+++
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 5789999999999999999999999999999874
No 364
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.07 E-value=0.0061 Score=42.24 Aligned_cols=41 Identities=10% Similarity=0.149 Sum_probs=33.2
Q ss_pred CCCCCCCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 190 RIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 190 ~~~~~~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
..+...++++|+|+|+|..|..++..|.+.|.+|+++.|.+
T Consensus 12 ~~~~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 12 HMSKKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp -----CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred hhhcccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 34455567899999999999999999999999999999876
No 365
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=96.06 E-value=0.0028 Score=43.43 Aligned_cols=33 Identities=12% Similarity=0.140 Sum_probs=30.3
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
.+|+|||+|..|..++..|.+.|.+|++++++.
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 589999999999999999999999999999864
No 366
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=96.05 E-value=0.0069 Score=49.08 Aligned_cols=33 Identities=33% Similarity=0.395 Sum_probs=30.8
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
.+|+|||+|..|+.++..|...|.+|+++|+++
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 579999999999999999999999999999864
No 367
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=96.04 E-value=0.0073 Score=45.55 Aligned_cols=33 Identities=18% Similarity=0.355 Sum_probs=30.6
Q ss_pred CeEEEECCChHHHHHHHHHHHcCC-cEEEEeeCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGH-TVVVYEKGE 35 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~-~v~v~e~~~ 35 (259)
.+|+|||+|-.|..+|..|.+.|. +++|+|++.
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 579999999999999999999998 899999964
No 368
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=96.03 E-value=0.0071 Score=48.20 Aligned_cols=34 Identities=26% Similarity=0.452 Sum_probs=31.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
+.+|+|||+|.-|.++|..|.+.|.+|.++++++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 3589999999999999999999999999999964
No 369
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=96.03 E-value=0.0088 Score=46.94 Aligned_cols=35 Identities=17% Similarity=0.391 Sum_probs=31.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCC-cEEEEeeCCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGH-TVVVYEKGEQ 36 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~-~v~v~e~~~~ 36 (259)
+.+|+|||+|..|..+|..|+..|+ +|+++|.++.
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~ 39 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKN 39 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHH
Confidence 4689999999999999999999998 9999998753
No 370
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=96.02 E-value=0.0065 Score=47.11 Aligned_cols=35 Identities=31% Similarity=0.518 Sum_probs=30.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 1 MFRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 1 ~~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
|+.+|.|||+|..|...|..|.+.|.+|.++|+++
T Consensus 4 M~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 4 MTMKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp --CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ccceEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 34689999999999999999999999999999864
No 371
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=96.01 E-value=0.0076 Score=46.78 Aligned_cols=34 Identities=15% Similarity=0.412 Sum_probs=31.2
Q ss_pred CCeEEEEC-CChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 2 FRHVAVIG-AGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 2 ~~~v~IIG-~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
+.+|.||| +|..|.++|..|.+.|.+|.++++++
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 46899999 99999999999999999999999864
No 372
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=96.00 E-value=0.0081 Score=47.84 Aligned_cols=33 Identities=24% Similarity=0.458 Sum_probs=30.8
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
.+|+|||+|..|...|..|.+.|.+|+++++++
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 589999999999999999999999999999863
No 373
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=96.00 E-value=0.0094 Score=43.84 Aligned_cols=33 Identities=24% Similarity=0.420 Sum_probs=30.6
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
.+|.|||+|..|...|..|.+.|.+|++++++.
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 579999999999999999999999999999864
No 374
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=95.99 E-value=0.0082 Score=46.30 Aligned_cols=34 Identities=21% Similarity=0.556 Sum_probs=31.6
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQ 36 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~ 36 (259)
++|.|||+|..|...|..|.+.|++|+++|+++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 5899999999999999999999999999999753
No 375
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=95.96 E-value=0.0094 Score=48.04 Aligned_cols=34 Identities=29% Similarity=0.296 Sum_probs=31.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
..+|+|+|+|..|+.++..|...|.+|+++|+.+
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999864
No 376
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=95.94 E-value=0.01 Score=46.48 Aligned_cols=34 Identities=24% Similarity=0.451 Sum_probs=31.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCC--cEEEEeeCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGH--TVVVYEKGE 35 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~--~v~v~e~~~ 35 (259)
..+|.|||+|..|.++|..|.+.|. +|+++|+++
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 3689999999999999999999999 999999874
No 377
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=95.92 E-value=0.0094 Score=46.39 Aligned_cols=33 Identities=27% Similarity=0.518 Sum_probs=30.4
Q ss_pred CeEEEECCChHHHHHHHHHHHcCC--cEEEEeeCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGH--TVVVYEKGE 35 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~--~v~v~e~~~ 35 (259)
++|+|||+|..|.++|..|...|. +++++|.++
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 379999999999999999999998 999999874
No 378
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=95.88 E-value=0.01 Score=48.73 Aligned_cols=34 Identities=26% Similarity=0.355 Sum_probs=31.7
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQ 36 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~ 36 (259)
.+|.|||+|.-|...|..|++.|++|+++|+++.
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 6799999999999999999999999999999753
No 379
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=95.87 E-value=0.0093 Score=46.55 Aligned_cols=33 Identities=33% Similarity=0.660 Sum_probs=30.4
Q ss_pred CeEEEECCChHHHHHHHHHHHcC--CcEEEEeeCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREG--HTVVVYEKGE 35 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g--~~v~v~e~~~ 35 (259)
.+|+|||+|..|.++|..|.+.| .+|+++|++.
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 68999999999999999999998 6899999964
No 380
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=95.86 E-value=0.011 Score=48.56 Aligned_cols=35 Identities=37% Similarity=0.532 Sum_probs=32.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQ 36 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~ 36 (259)
+.++.|||.|.-|+.+|..|++.|++|+++|+++.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 35799999999999999999999999999999865
No 381
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=95.86 E-value=0.0095 Score=46.75 Aligned_cols=33 Identities=24% Similarity=0.563 Sum_probs=31.0
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
.+|.|||.|..|..+|..|.+.|++|+++|+++
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 589999999999999999999999999999874
No 382
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=95.85 E-value=0.011 Score=46.07 Aligned_cols=34 Identities=32% Similarity=0.611 Sum_probs=31.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
+.+|.|||.|.-|...|..|.+.|++|+++|+++
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3689999999999999999999999999999874
No 383
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=95.85 E-value=0.01 Score=46.47 Aligned_cols=34 Identities=24% Similarity=0.296 Sum_probs=30.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCC--cEEEEeeCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGH--TVVVYEKGE 35 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~--~v~v~e~~~ 35 (259)
+.+|+|||+|..|.++|..|...+. +++++|.+.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 3589999999999999999999987 899999864
No 384
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=95.84 E-value=0.0053 Score=48.28 Aligned_cols=33 Identities=24% Similarity=0.389 Sum_probs=31.1
Q ss_pred CeEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 198 QVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 198 ~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
.+|+|||+|.+|+-+|..|.+.|.+|+++++.+
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCC
Confidence 469999999999999999999999999999986
No 385
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=95.83 E-value=0.012 Score=46.96 Aligned_cols=33 Identities=18% Similarity=0.378 Sum_probs=30.7
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
.+|+|+|+|..|..++..|...|.+|+++|+++
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 579999999999999999999999999999864
No 386
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=95.82 E-value=0.013 Score=45.99 Aligned_cols=35 Identities=26% Similarity=0.359 Sum_probs=31.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCC-cEEEEeeCCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGH-TVVVYEKGEQ 36 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~-~v~v~e~~~~ 36 (259)
+.+|+|||+|..|.++|..|...++ +++++|.++.
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~ 42 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEG 42 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCch
Confidence 4589999999999999999999998 9999999753
No 387
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=95.82 E-value=0.0053 Score=50.30 Aligned_cols=36 Identities=17% Similarity=0.236 Sum_probs=32.5
Q ss_pred CCeEEEEccCcCHHHHHHHHhcccCeEEEEecCCCc
Q 024975 197 DQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVAD 232 (259)
Q Consensus 197 ~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~~~ 232 (259)
.++|+|||+|++|+-+|..|++.|.+|+++++++.+
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~~~ 57 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRKPD 57 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCCGG
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCChH
Confidence 368999999999999999999999999999998743
No 388
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=95.81 E-value=0.006 Score=49.36 Aligned_cols=33 Identities=24% Similarity=0.212 Sum_probs=31.3
Q ss_pred CeEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 198 QVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 198 ~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
-+|+|||+|++|.=+|..|.+.|.+|++++|.+
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~ 34 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNS 34 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCC
Confidence 479999999999999999999999999999977
No 389
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=95.81 E-value=0.01 Score=49.16 Aligned_cols=33 Identities=30% Similarity=0.434 Sum_probs=30.9
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
.+|.|||+|.-|..+|..|++.|++|+++|+++
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 579999999999999999999999999999864
No 390
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=95.80 E-value=0.0082 Score=49.93 Aligned_cols=34 Identities=24% Similarity=0.255 Sum_probs=30.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHc--CCcEEEEeeCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLRE--GHTVVVYEKGE 35 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~--g~~v~v~e~~~ 35 (259)
+.+|.|||+|..|+.+|..|++. |++|+++|+++
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 46899999999999999999998 78999999863
No 391
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=95.78 E-value=0.0074 Score=46.47 Aligned_cols=33 Identities=24% Similarity=0.363 Sum_probs=30.8
Q ss_pred CeEEEEccCcCHHHHHHHHhcc-cCeEEEEecCC
Q 024975 198 QVVILIGHYASGLDIKRDLAGF-AKEVHIASRSV 230 (259)
Q Consensus 198 ~~v~viG~G~~a~e~a~~l~~~-~~~v~~~~r~~ 230 (259)
.+|+|||+|++|+.+|..|.+. +.+|+++.+.+
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~ 73 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSV 73 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSS
T ss_pred cCEEEECccHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 4699999999999999999997 99999999987
No 392
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=95.78 E-value=0.01 Score=48.40 Aligned_cols=33 Identities=27% Similarity=0.477 Sum_probs=30.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
+.+|.|||+|..|+.+|..|++ |.+|+++|+++
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 3589999999999999999998 99999999874
No 393
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=95.77 E-value=0.0078 Score=48.83 Aligned_cols=35 Identities=17% Similarity=0.142 Sum_probs=32.2
Q ss_pred CCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 196 QDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 196 ~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
+..+|+|||+|++|+-+|..|.+.|.+|++++|.+
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~ 56 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVK 56 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 44689999999999999999999999999999987
No 394
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=95.76 E-value=0.005 Score=50.92 Aligned_cols=34 Identities=21% Similarity=0.456 Sum_probs=31.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
.++|+|+|+|-.|..+|..|.+.|++|+++|+++
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 3589999999999999999999999999999974
No 395
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=95.76 E-value=0.012 Score=49.16 Aligned_cols=35 Identities=23% Similarity=0.328 Sum_probs=32.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 1 MFRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 1 ~~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
|..+|.|||+|.-|..+|..|.+.|++|+++++++
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 56789999999999999999999999999999874
No 396
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=95.76 E-value=0.006 Score=49.54 Aligned_cols=32 Identities=25% Similarity=0.280 Sum_probs=29.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHH-cCCcEEEEe
Q 024975 1 MFRHVAVIGAGAAGLVVGHELLR-EGHTVVVYE 32 (259)
Q Consensus 1 ~~~~v~IIG~G~~Gl~~a~~L~~-~g~~v~v~e 32 (259)
|+++|+|||+|..|.++|..|++ .|.+|++++
T Consensus 1 ~~mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 1 MTVKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred CCceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 56789999999999999999988 599999999
No 397
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=95.76 E-value=0.0093 Score=49.87 Aligned_cols=35 Identities=17% Similarity=0.333 Sum_probs=32.5
Q ss_pred CCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 196 QDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 196 ~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
...+|+|||+|++|+.+|..|.+.|.+|+++++.+
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~ 125 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRI 125 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEecc
Confidence 35789999999999999999999999999999986
No 398
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=95.75 E-value=0.012 Score=46.05 Aligned_cols=32 Identities=41% Similarity=0.579 Sum_probs=29.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKG 34 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~ 34 (259)
+.+|+|||+|.-|.+.|..|.+.|.+|+++ +.
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 468999999999999999999999999999 64
No 399
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=95.74 E-value=0.013 Score=44.96 Aligned_cols=34 Identities=24% Similarity=0.451 Sum_probs=30.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCC--cEEEEeeCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGH--TVVVYEKGE 35 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~--~v~v~e~~~ 35 (259)
|++|.|||+|..|.++|..|.+.|. +|+++|+++
T Consensus 1 m~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 1 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CcEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 3689999999999999999999998 899999864
No 400
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=95.74 E-value=0.012 Score=45.39 Aligned_cols=32 Identities=34% Similarity=0.440 Sum_probs=30.2
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
++|.|||+|.-|...|..|+ .|++|+++|+++
T Consensus 13 ~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 13 MKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 68999999999999999999 999999999974
No 401
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=95.73 E-value=0.013 Score=47.77 Aligned_cols=34 Identities=29% Similarity=0.483 Sum_probs=31.6
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQ 36 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~ 36 (259)
.+|+|||.|..|..+|..|.+.|++|+++|+++.
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 5799999999999999999999999999999843
No 402
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=95.67 E-value=0.0061 Score=49.37 Aligned_cols=53 Identities=4% Similarity=-0.117 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEccCC
Q 024975 105 VLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVCNGH 164 (259)
Q Consensus 105 ~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlAtG~ 164 (259)
+.+.+...+++.+++ ++.++++..++... +...+.+.++. .+.+|.|++|+|.
T Consensus 204 ~~~~~~~~l~~~gi~--v~~~~~v~~v~~~~-~~~~v~~~~g~----~i~~D~vi~~~g~ 256 (401)
T 3vrd_B 204 WERLYGFGTENALIE--WHPGPDAAVVKTDT-EAMTVETSFGE----TFKAAVINLIPPQ 256 (401)
T ss_dssp HHHHSCTTSTTCSEE--EECTTTTCEEEEET-TTTEEEETTSC----EEECSEEEECCCE
T ss_pred HHHHHHHHHHhcCcE--EEeCceEEEEEecc-cceEEEcCCCc----EEEeeEEEEecCc
Confidence 333444444556788 88899988888776 56677777765 8999999999995
No 403
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=95.66 E-value=0.017 Score=44.25 Aligned_cols=34 Identities=24% Similarity=0.498 Sum_probs=31.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
+++|+|.|+|..|..++..|.+.|.+|++++++.
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 4689999999999999999999999999999974
No 404
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=95.66 E-value=0.015 Score=45.47 Aligned_cols=32 Identities=31% Similarity=0.432 Sum_probs=30.5
Q ss_pred CeEEEECCChHHHHHHHHHHHcCC-cEEEEeeC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGH-TVVVYEKG 34 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~-~v~v~e~~ 34 (259)
.+|+|||+|..|.++|..|...|+ +++++|.+
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 589999999999999999999999 99999997
No 405
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=95.66 E-value=0.013 Score=45.44 Aligned_cols=34 Identities=21% Similarity=0.465 Sum_probs=30.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCC--cEEEEeeCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGH--TVVVYEKGE 35 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~--~v~v~e~~~ 35 (259)
+.+|+|||+|..|..+|+.|...+. +++++|.++
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 4689999999999999999999988 999999975
No 406
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=95.64 E-value=0.0069 Score=48.49 Aligned_cols=32 Identities=28% Similarity=0.442 Sum_probs=30.2
Q ss_pred eEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 4 HVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 4 ~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
+|.|||+|.-|.+.|..|.+.|.+|+++++++
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 89999999999999999999999999999863
No 407
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=95.62 E-value=0.011 Score=48.52 Aligned_cols=32 Identities=25% Similarity=0.434 Sum_probs=30.2
Q ss_pred eEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 4 HVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 4 ~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
+|+|||+|..|+.+|..|++.|.+|+++|+++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 79999999999999999999999999999863
No 408
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=95.60 E-value=0.0093 Score=48.24 Aligned_cols=35 Identities=23% Similarity=0.264 Sum_probs=32.2
Q ss_pred CCeEEEEccCcCHHHHHHHHhcccCeEEEEecCCC
Q 024975 197 DQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA 231 (259)
Q Consensus 197 ~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~~ 231 (259)
..+|+|||+|++|+-+|..|.+.|.+|++++|.+.
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 39 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQ 39 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 36799999999999999999999999999999873
No 409
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=95.60 E-value=0.01 Score=46.37 Aligned_cols=31 Identities=29% Similarity=0.344 Sum_probs=29.3
Q ss_pred CeEEEECCChHHHHHHHHHHHc-----C-CcEEEEee
Q 024975 3 RHVAVIGAGAAGLVVGHELLRE-----G-HTVVVYEK 33 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~-----g-~~v~v~e~ 33 (259)
.+|.|||+|.-|...|..|.+. | .+|+++++
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 5799999999999999999999 9 99999988
No 410
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=95.60 E-value=0.011 Score=47.83 Aligned_cols=34 Identities=26% Similarity=0.329 Sum_probs=31.9
Q ss_pred CCeEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 197 DQVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 197 ~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
..+|+|||+|.+|+-+|..|.+.|.+|++++|.+
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~ 59 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDN 59 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 4689999999999999999999999999999986
No 411
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=95.58 E-value=0.0078 Score=48.33 Aligned_cols=32 Identities=16% Similarity=0.218 Sum_probs=30.5
Q ss_pred eEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 199 VVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 199 ~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
.|+|||+|++|.-+|..|++.|.+|++++|++
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~V~v~Er~~ 37 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKRP 37 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 49999999999999999999999999999976
No 412
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=95.58 E-value=0.017 Score=45.14 Aligned_cols=33 Identities=27% Similarity=0.466 Sum_probs=29.8
Q ss_pred eEEEECCChHHHHHHHHHHHc--CCcEEEEeeCCC
Q 024975 4 HVAVIGAGAAGLVVGHELLRE--GHTVVVYEKGEQ 36 (259)
Q Consensus 4 ~v~IIG~G~~Gl~~a~~L~~~--g~~v~v~e~~~~ 36 (259)
+|+|||+|..|.++|..|.+. +.+|+++|+++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~ 36 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEG 36 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChh
Confidence 799999999999999999985 689999999753
No 413
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=95.57 E-value=0.018 Score=45.08 Aligned_cols=35 Identities=23% Similarity=0.431 Sum_probs=31.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCC-cEEEEeeCCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGH-TVVVYEKGEQ 36 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~-~v~v~e~~~~ 36 (259)
+.+|+|||+|..|.++|..|...+. +++++|.++.
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~ 40 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQG 40 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChH
Confidence 3689999999999999999999888 9999999753
No 414
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=95.56 E-value=0.012 Score=44.79 Aligned_cols=37 Identities=22% Similarity=0.292 Sum_probs=34.0
Q ss_pred CCCCeEEEEccCcCHHHHHHHHhcccCeEEEEecCCC
Q 024975 195 FQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA 231 (259)
Q Consensus 195 ~~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~~ 231 (259)
..+++|+|||+|.+|.-.+..|.+.|.+|+++.+...
T Consensus 11 l~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~~ 47 (274)
T 1kyq_A 11 LKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDLH 47 (274)
T ss_dssp CTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEEC
T ss_pred cCCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 4579999999999999999999999999999998764
No 415
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=95.54 E-value=0.019 Score=43.61 Aligned_cols=33 Identities=24% Similarity=0.494 Sum_probs=30.7
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
++++|||+|-+|-+++..|.+.|.+|+|+.|..
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 579999999999999999999999999998864
No 416
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=95.54 E-value=0.021 Score=41.90 Aligned_cols=36 Identities=19% Similarity=0.435 Sum_probs=31.3
Q ss_pred CCCeEEEECC-ChHHHHHHHHHH-HcCCcEEEEeeCCC
Q 024975 1 MFRHVAVIGA-GAAGLVVGHELL-REGHTVVVYEKGEQ 36 (259)
Q Consensus 1 ~~~~v~IIG~-G~~Gl~~a~~L~-~~g~~v~v~e~~~~ 36 (259)
||+.|+|.|| |..|..++..|. +.|.+|+++++++.
T Consensus 4 mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~ 41 (221)
T 3r6d_A 4 MYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLK 41 (221)
T ss_dssp SCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHH
T ss_pred eEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCcc
Confidence 3456999996 999999999999 89999999998743
No 417
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=95.53 E-value=0.011 Score=45.42 Aligned_cols=32 Identities=31% Similarity=0.469 Sum_probs=29.8
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
.+|.|||+|..|...|..|.+ |.+|+++|+++
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 579999999999999999999 99999999864
No 418
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=95.52 E-value=0.019 Score=46.04 Aligned_cols=33 Identities=21% Similarity=0.390 Sum_probs=30.7
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
..|+|+|+|..|..+|..|...|.+|+++|+++
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 579999999999999999999999999999863
No 419
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=95.52 E-value=0.015 Score=45.48 Aligned_cols=33 Identities=21% Similarity=0.394 Sum_probs=30.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCC-cEEEEeeC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGH-TVVVYEKG 34 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~-~v~v~e~~ 34 (259)
+.+|.|||.|.-|..+|..|.+.|+ +|+++|++
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 3689999999999999999999999 99999995
No 420
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=95.50 E-value=0.01 Score=47.64 Aligned_cols=35 Identities=17% Similarity=0.135 Sum_probs=32.3
Q ss_pred CCeEEEEccCcCHHHHHHHHhcccCeEEEEecCCC
Q 024975 197 DQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA 231 (259)
Q Consensus 197 ~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~~ 231 (259)
..+|+|||+|.+|+.+|..|.+.|.+|++++|.+.
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~ 45 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSE 45 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC
Confidence 46899999999999999999999999999999873
No 421
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=95.49 E-value=0.018 Score=45.93 Aligned_cols=33 Identities=30% Similarity=0.517 Sum_probs=31.3
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
.+|.|||.|.-|..+|..|.+.|++|+++|+++
T Consensus 23 mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 689999999999999999999999999999974
No 422
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=95.49 E-value=0.015 Score=45.51 Aligned_cols=33 Identities=21% Similarity=0.470 Sum_probs=30.3
Q ss_pred CeEEEECCChHHHHHHHHHHHcCC--cEEEEeeCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGH--TVVVYEKGE 35 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~--~v~v~e~~~ 35 (259)
++|+|||+|..|.++|..|.+.|. +|+++|+++
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 379999999999999999999998 999999864
No 423
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=95.48 E-value=0.02 Score=46.03 Aligned_cols=34 Identities=35% Similarity=0.341 Sum_probs=31.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
...|+|||+|..|..+|..|...|.+|+++|+++
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3579999999999999999999999999999863
No 424
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=95.47 E-value=0.02 Score=43.71 Aligned_cols=33 Identities=27% Similarity=0.261 Sum_probs=30.5
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
+.++|+|+|-.|.++|..|.+.|.+|++++++.
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 579999999999999999999999999998863
No 425
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=95.47 E-value=0.045 Score=45.69 Aligned_cols=47 Identities=19% Similarity=0.215 Sum_probs=35.9
Q ss_pred HHHHHhCCceeEEeceeEEEEEEeCCCcEEEEEEecCCceEEEEeCEEEEccCC
Q 024975 111 NFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVCNGH 164 (259)
Q Consensus 111 ~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ad~VIlAtG~ 164 (259)
+.+++.|++ ++.+++|+++...+ +...+.+.++. .+.+|.||+|+|.
T Consensus 265 ~~l~~~GV~--v~~~~~v~~i~~~~-~v~~v~~~~g~----~i~aD~Vv~a~G~ 311 (493)
T 1y56_A 265 QELERWGID--YVHIPNVKRVEGNE-KVERVIDMNNH----EYKVDALIFADGR 311 (493)
T ss_dssp HHHHHHTCE--EEECSSEEEEECSS-SCCEEEETTCC----EEECSEEEECCCE
T ss_pred HHHHhCCcE--EEeCCeeEEEecCC-ceEEEEeCCCe----EEEeCEEEECCCc
Confidence 455677999 99999999998543 44456655543 7999999999994
No 426
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=95.46 E-value=0.036 Score=45.05 Aligned_cols=57 Identities=16% Similarity=0.169 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHhCCceeEEeceeEEEEEEeCCCcEE-EEEEecCCceEEEEeCEEEEccCCCCC
Q 024975 103 EEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWK-VKSRKKDDVVEEETFDAVVVCNGHFSV 167 (259)
Q Consensus 103 ~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~-v~~~~g~~~~~~~~ad~VIlAtG~~s~ 167 (259)
..+.+.|.+.+.+.|.+ ++++++|++|..++ +.+. |.++ + ..+.||.||+|+|.+..
T Consensus 196 ~~l~~~l~~~~~~~G~~--i~~~~~V~~i~~~~-~~~~gv~~~-g----~~~~ad~VV~a~~~~~~ 253 (425)
T 3ka7_A 196 KGIIDALETVISANGGK--IHTGQEVSKILIEN-GKAAGIIAD-D----RIHDADLVISNLGHAAT 253 (425)
T ss_dssp HHHHHHHHHHHHHTTCE--EECSCCEEEEEEET-TEEEEEEET-T----EEEECSEEEECSCHHHH
T ss_pred HHHHHHHHHHHHHcCCE--EEECCceeEEEEEC-CEEEEEEEC-C----EEEECCEEEECCCHHHH
Confidence 45777778888888999 99999999999876 5565 6554 3 37999999999997543
No 427
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=95.44 E-value=0.022 Score=43.76 Aligned_cols=34 Identities=18% Similarity=0.291 Sum_probs=31.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCC---cEEEEeeCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGH---TVVVYEKGE 35 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~---~v~v~e~~~ 35 (259)
+++|.|||+|.-|.+.|..|.+.|+ +|+++|+++
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 4789999999999999999999998 999999975
No 428
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=95.42 E-value=0.016 Score=45.60 Aligned_cols=30 Identities=30% Similarity=0.576 Sum_probs=29.0
Q ss_pred eEEEECCChHHHHHHHHHHHcCCcEEEEee
Q 024975 4 HVAVIGAGAAGLVVGHELLREGHTVVVYEK 33 (259)
Q Consensus 4 ~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~ 33 (259)
+|.|||+|..|...|..|.+.|.+|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 699999999999999999999999999998
No 429
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=95.41 E-value=0.018 Score=47.77 Aligned_cols=33 Identities=33% Similarity=0.596 Sum_probs=31.1
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
.+|.|||+|.-|...|..|++.|++|+++|+++
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 589999999999999999999999999999874
No 430
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=95.40 E-value=0.019 Score=44.85 Aligned_cols=33 Identities=30% Similarity=0.595 Sum_probs=30.9
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
.+|.|||+|..|...|..|.+.|.+|+++|+++
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 679999999999999999999999999999864
No 431
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=95.37 E-value=0.025 Score=45.48 Aligned_cols=35 Identities=26% Similarity=0.440 Sum_probs=31.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQ 36 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~ 36 (259)
++.|+|||+|..|.+++..+.+.|++++++|.++.
T Consensus 12 ~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~ 46 (377)
T 3orq_A 12 GATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSED 46 (377)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 36799999999999999999999999999998643
No 432
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=95.36 E-value=0.021 Score=41.73 Aligned_cols=32 Identities=34% Similarity=0.511 Sum_probs=29.8
Q ss_pred eEEEEC-CChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 4 HVAVIG-AGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 4 ~v~IIG-~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
+|+||| +|..|..+|..|.+.|.+|.++++++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 699999 99999999999999999999999863
No 433
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=95.36 E-value=0.015 Score=48.22 Aligned_cols=34 Identities=24% Similarity=0.290 Sum_probs=31.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHc--CCcEEEEeeCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLRE--GHTVVVYEKGE 35 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~--g~~v~v~e~~~ 35 (259)
+.+|.|||+|..|+.+|..|++. |.+|+++|+++
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred ccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 35899999999999999999999 79999999863
No 434
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=95.34 E-value=0.021 Score=47.38 Aligned_cols=35 Identities=17% Similarity=0.275 Sum_probs=32.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQ 36 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~ 36 (259)
+.+|.|||.|.-|..+|..|.+.|++|+++|+++.
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~ 38 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVS 38 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTH
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 46899999999999999999999999999999753
No 435
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=95.32 E-value=0.021 Score=43.26 Aligned_cols=34 Identities=15% Similarity=0.391 Sum_probs=30.8
Q ss_pred CeEEEECCChHHHHHHHHHHHcC----CcEEEEeeCCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREG----HTVVVYEKGEQ 36 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g----~~v~v~e~~~~ 36 (259)
.+|.|||+|.-|.+.|..|.+.| .+|.++|+++.
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 58999999999999999999998 69999998753
No 436
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=95.31 E-value=0.023 Score=44.89 Aligned_cols=34 Identities=26% Similarity=0.435 Sum_probs=31.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
..+|.|||.|.-|-++|..|.+.|.+|+++|+++
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3679999999999999999999999999999874
No 437
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=95.30 E-value=0.011 Score=49.33 Aligned_cols=34 Identities=26% Similarity=0.364 Sum_probs=32.0
Q ss_pred CCeEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 197 DQVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 197 ~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
..+|+|||+|.+|+.+|..|.+.|.+|+++++++
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~ 66 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASE 66 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCC
Confidence 4789999999999999999999999999999987
No 438
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=95.29 E-value=0.021 Score=44.65 Aligned_cols=33 Identities=24% Similarity=0.432 Sum_probs=29.6
Q ss_pred CeEEEECCChHHHHHHHHHHHcCC--cEEEEeeCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGH--TVVVYEKGE 35 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~--~v~v~e~~~ 35 (259)
.+|+|||+|..|.++|..|...+. ++.++|.+.
T Consensus 7 ~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~ 41 (317)
T 3d0o_A 7 NKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDT 41 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 589999999999999999998885 899999753
No 439
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=95.29 E-value=0.022 Score=44.73 Aligned_cols=34 Identities=32% Similarity=0.515 Sum_probs=30.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCC--cEEEEeeCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGH--TVVVYEKGE 35 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~--~v~v~e~~~ 35 (259)
+.+|+|||+|..|.++|..|...+. +++++|.+.
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVNK 40 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecch
Confidence 3589999999999999999999987 899999863
No 440
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=95.28 E-value=0.024 Score=44.51 Aligned_cols=34 Identities=26% Similarity=0.454 Sum_probs=30.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCC-cEEEEeeCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGH-TVVVYEKGE 35 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~-~v~v~e~~~ 35 (259)
..+|+|||+|-.|..+|..|.+.|+ +++|+|...
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 3689999999999999999999998 899999863
No 441
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=95.26 E-value=0.022 Score=44.08 Aligned_cols=33 Identities=21% Similarity=0.313 Sum_probs=30.3
Q ss_pred CeEEEECCChHHHHHHHHHHHcCC-cEEEEeeCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGH-TVVVYEKGE 35 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~-~v~v~e~~~ 35 (259)
++++|||+|..|.++|..|.+.|. +|+|+++..
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 579999999999999999999998 999998863
No 442
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=95.26 E-value=0.023 Score=44.49 Aligned_cols=34 Identities=32% Similarity=0.452 Sum_probs=30.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCC--cEEEEeeCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGH--TVVVYEKGE 35 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~--~v~v~e~~~ 35 (259)
+.+|+|||+|..|.++|..|...+. +++++|.+.
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 4689999999999999999998875 899999874
No 443
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=95.24 E-value=0.01 Score=47.53 Aligned_cols=33 Identities=21% Similarity=0.128 Sum_probs=31.2
Q ss_pred CeEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 198 QVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 198 ~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
.+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 18 ~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~ 50 (382)
T 1ryi_A 18 YEAVVIGGGIIGSAIAYYLAKENKNTALFESGT 50 (382)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 579999999999999999999999999999976
No 444
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=95.23 E-value=0.022 Score=44.04 Aligned_cols=32 Identities=19% Similarity=0.321 Sum_probs=29.8
Q ss_pred eEEEECCChHHHHHHHHHHHcCC--cEEEEeeCC
Q 024975 4 HVAVIGAGAAGLVVGHELLREGH--TVVVYEKGE 35 (259)
Q Consensus 4 ~v~IIG~G~~Gl~~a~~L~~~g~--~v~v~e~~~ 35 (259)
+|+|||+|..|.++|..|.+.+. +++++|..+
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 79999999999999999999987 899999864
No 445
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=95.22 E-value=0.027 Score=43.83 Aligned_cols=35 Identities=20% Similarity=0.314 Sum_probs=32.2
Q ss_pred CCeEEEECC-ChHHHHHHHHHHHcCCcEEEEeeCCC
Q 024975 2 FRHVAVIGA-GAAGLVVGHELLREGHTVVVYEKGEQ 36 (259)
Q Consensus 2 ~~~v~IIG~-G~~Gl~~a~~L~~~g~~v~v~e~~~~ 36 (259)
+++|+|.|| |..|..++..|.+.|.+|+++++...
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 578999999 99999999999999999999998653
No 446
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=95.21 E-value=0.017 Score=46.90 Aligned_cols=31 Identities=29% Similarity=0.378 Sum_probs=29.1
Q ss_pred eEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 4 HVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 4 ~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
+|.|||+|..|+.+|..|.+ |.+|+++|+++
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 79999999999999999999 99999999863
No 447
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=95.21 E-value=0.027 Score=45.26 Aligned_cols=34 Identities=24% Similarity=0.477 Sum_probs=31.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
|++|+|||+|..|..++..|.+.|+++++++.++
T Consensus 1 M~~Ililg~g~~g~~~~~a~~~~G~~v~~~~~~~ 34 (380)
T 3ax6_A 1 MKKIGIIGGGQLGKMMTLEAKKMGFYVIVLDPTP 34 (380)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESST
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 4789999999999999999999999999999864
No 448
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=95.20 E-value=0.022 Score=47.05 Aligned_cols=33 Identities=21% Similarity=0.270 Sum_probs=30.9
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
+.|+|||+|..|...+..|.+.|.+|+|+++..
T Consensus 13 ~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~ 45 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLLEAGARLTVNALTF 45 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTBEEEEEESSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCC
Confidence 679999999999999999999999999999853
No 449
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=95.19 E-value=0.023 Score=43.72 Aligned_cols=33 Identities=27% Similarity=0.506 Sum_probs=30.4
Q ss_pred CeEEEECCChHHHHHHHHHHHcCC-cEEEEeeCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGH-TVVVYEKGE 35 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~-~v~v~e~~~ 35 (259)
.+|+|||+|-.|..+|..|.+.|+ +++|+|.+.
T Consensus 37 ~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 37 FAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 589999999999999999999997 899999863
No 450
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=95.19 E-value=0.013 Score=47.20 Aligned_cols=33 Identities=15% Similarity=0.148 Sum_probs=31.0
Q ss_pred CeEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 198 QVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 198 ~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
++|+|||+|..|+++|..+++.|.+|+++.+++
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 469999999999999999999999999999877
No 451
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=95.18 E-value=0.025 Score=43.28 Aligned_cols=32 Identities=25% Similarity=0.526 Sum_probs=29.9
Q ss_pred eEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 4 HVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 4 ~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
+|.|||+|..|.++|..|.+.|.+|+++|+++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 69999999999999999999999999998864
No 452
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=95.17 E-value=0.027 Score=43.72 Aligned_cols=34 Identities=26% Similarity=0.436 Sum_probs=31.4
Q ss_pred CCCeEEEECC-ChHHHHHHHHHHHcCCcEEEEeeC
Q 024975 1 MFRHVAVIGA-GAAGLVVGHELLREGHTVVVYEKG 34 (259)
Q Consensus 1 ~~~~v~IIG~-G~~Gl~~a~~L~~~g~~v~v~e~~ 34 (259)
|+++|+|.|| |..|..++..|.+.|.+|+++++.
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~ 35 (311)
T 3m2p_A 1 MSLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRS 35 (311)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCC
Confidence 6789999996 999999999999999999999997
No 453
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=95.16 E-value=0.031 Score=40.31 Aligned_cols=33 Identities=27% Similarity=0.509 Sum_probs=30.8
Q ss_pred CeEEEECC-ChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 3 RHVAVIGA-GAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 3 ~~v~IIG~-G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
+.|+|+|| |..|..++..|.+.|.+|+++++++
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 68999999 9999999999999999999999864
No 454
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=95.16 E-value=0.028 Score=41.71 Aligned_cols=35 Identities=31% Similarity=0.378 Sum_probs=31.8
Q ss_pred CCeEEEECC-ChHHHHHHHHHHHcCCcEEEEeeCCC
Q 024975 2 FRHVAVIGA-GAAGLVVGHELLREGHTVVVYEKGEQ 36 (259)
Q Consensus 2 ~~~v~IIG~-G~~Gl~~a~~L~~~g~~v~v~e~~~~ 36 (259)
.+.|+|.|| |..|..++..|.+.|.+|+++++++.
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~ 56 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEE 56 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred CCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChH
Confidence 467999999 99999999999999999999999743
No 455
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=95.15 E-value=0.014 Score=46.93 Aligned_cols=33 Identities=18% Similarity=0.267 Sum_probs=30.8
Q ss_pred eEEEEccCcCHHHHHHHHhcc--cCeEEEEecCCC
Q 024975 199 VVILIGHYASGLDIKRDLAGF--AKEVHIASRSVA 231 (259)
Q Consensus 199 ~v~viG~G~~a~e~a~~l~~~--~~~v~~~~r~~~ 231 (259)
+|+|||+|++|+-+|..|.+. |.+|++++|.+.
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~ 36 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDE 36 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCT
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCC
Confidence 699999999999999999998 999999999873
No 456
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=95.15 E-value=0.015 Score=46.32 Aligned_cols=34 Identities=18% Similarity=0.335 Sum_probs=31.1
Q ss_pred CeEEEECCChHHHHHHHHHHHcC-------CcEEEEeeCCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREG-------HTVVVYEKGEQ 36 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g-------~~v~v~e~~~~ 36 (259)
++|+|||+|.-|.+.|..|.+.| .+|+++++++.
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 48999999999999999999998 89999998754
No 457
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=95.15 E-value=0.026 Score=44.25 Aligned_cols=34 Identities=18% Similarity=0.319 Sum_probs=30.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCC--cEEEEeeCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGH--TVVVYEKGE 35 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~--~v~v~e~~~ 35 (259)
+.+|+|||+|..|.++|+.|...+. +++++|.+.
T Consensus 9 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 44 (326)
T 3vku_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFK 44 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 3689999999999999999999887 899999853
No 458
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=95.14 E-value=0.023 Score=44.04 Aligned_cols=34 Identities=35% Similarity=0.490 Sum_probs=31.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
+.+|.|||+|..|...|..|.+.|.+|+++|+++
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 3589999999999999999999999999999864
No 459
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=95.14 E-value=0.015 Score=46.93 Aligned_cols=33 Identities=21% Similarity=0.261 Sum_probs=31.1
Q ss_pred CeEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 198 QVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 198 ~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
.+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~ 37 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAERGHRVLVLERHT 37 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 469999999999999999999999999999987
No 460
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=95.13 E-value=0.031 Score=45.10 Aligned_cols=33 Identities=18% Similarity=0.405 Sum_probs=30.9
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
+.|+|||+|..|..++..+.+.|++++++|.++
T Consensus 15 k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~ 47 (389)
T 3q2o_A 15 KTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTK 47 (389)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESST
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 579999999999999999999999999999864
No 461
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=95.13 E-value=0.0091 Score=44.48 Aligned_cols=33 Identities=27% Similarity=0.259 Sum_probs=30.3
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQ 36 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~~ 36 (259)
.+++|+|+|..|..+|..|.+.|. |+++|+++.
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~ 42 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGSEV-FVLAEDENV 42 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGG
T ss_pred CEEEEECCChHHHHHHHHHHhCCe-EEEEECCHH
Confidence 579999999999999999999999 999999753
No 462
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=95.13 E-value=0.029 Score=43.38 Aligned_cols=33 Identities=30% Similarity=0.453 Sum_probs=30.8
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
+.|.|||+|..|..+|..|...|.+|+++++..
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 579999999999999999999999999999864
No 463
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=95.11 E-value=0.022 Score=43.58 Aligned_cols=33 Identities=30% Similarity=0.396 Sum_probs=30.6
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
+.++|+|+|-.|.++|..|.+.|.+|+|++|+.
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 579999999999999999999999999999863
No 464
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=95.11 E-value=0.024 Score=44.03 Aligned_cols=34 Identities=26% Similarity=0.518 Sum_probs=32.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
|++|-+||-|.-|...|.+|.+.|++|+++|+++
T Consensus 3 M~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~ 36 (300)
T 3obb_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (300)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred cCEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 6899999999999999999999999999999974
No 465
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=95.11 E-value=0.013 Score=47.78 Aligned_cols=34 Identities=21% Similarity=0.263 Sum_probs=31.3
Q ss_pred CCeEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 197 DQVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 197 ~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
..+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~ 60 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHAR 60 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 3579999999999999999999999999999987
No 466
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=95.09 E-value=0.026 Score=43.99 Aligned_cols=34 Identities=32% Similarity=0.451 Sum_probs=30.6
Q ss_pred CeEEEECCChHHHHHHHHHHHcCC--cEEEEeeCCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGH--TVVVYEKGEQ 36 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~--~v~v~e~~~~ 36 (259)
++|+|||+|..|.++|..|...+. +++++|.++.
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~ 36 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDG 36 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchH
Confidence 379999999999999999999887 8999999753
No 467
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=95.08 E-value=0.033 Score=43.18 Aligned_cols=33 Identities=27% Similarity=0.472 Sum_probs=30.8
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
..+.|||+|..|..+|..|...|.+|+++|+..
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 579999999999999999999999999999863
No 468
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=95.07 E-value=0.015 Score=48.16 Aligned_cols=33 Identities=24% Similarity=0.289 Sum_probs=31.2
Q ss_pred CeEEEEccCcCHHHHHHHHhcccC--eEEEEecCC
Q 024975 198 QVVILIGHYASGLDIKRDLAGFAK--EVHIASRSV 230 (259)
Q Consensus 198 ~~v~viG~G~~a~e~a~~l~~~~~--~v~~~~r~~ 230 (259)
++|+|||+|.+|+-.|..|.+.|. +|+++++++
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~ 37 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSE 37 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCC
Confidence 579999999999999999999998 999999977
No 469
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=95.07 E-value=0.014 Score=47.08 Aligned_cols=33 Identities=15% Similarity=0.094 Sum_probs=31.2
Q ss_pred CeEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 198 QVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 198 ~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
.+|+|||+|.+|+-+|..|.+.|.+|+++++.+
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~ 39 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQGHRVVVVEQAR 39 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 479999999999999999999999999999987
No 470
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=95.06 E-value=0.017 Score=46.34 Aligned_cols=34 Identities=18% Similarity=0.252 Sum_probs=31.8
Q ss_pred CCCeEEEEccCcCHHHHHHHHhcccCeEEEEecC
Q 024975 196 QDQVVILIGHYASGLDIKRDLAGFAKEVHIASRS 229 (259)
Q Consensus 196 ~~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~ 229 (259)
...+|+|||+|.+|+-+|..|.+.|.+|++++++
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~ 76 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEAN 76 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEecc
Confidence 3578999999999999999999999999999998
No 471
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=95.05 E-value=0.015 Score=46.26 Aligned_cols=33 Identities=36% Similarity=0.369 Sum_probs=31.1
Q ss_pred CeEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 198 QVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 198 ~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
.+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~ 37 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAAGGHEVLVAEAAE 37 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 479999999999999999999999999999985
No 472
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=95.05 E-value=0.015 Score=47.24 Aligned_cols=33 Identities=18% Similarity=0.136 Sum_probs=31.2
Q ss_pred CeEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 198 QVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 198 ~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
.+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~ 38 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQK 38 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 479999999999999999999999999999986
No 473
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=95.04 E-value=0.027 Score=44.21 Aligned_cols=33 Identities=21% Similarity=0.389 Sum_probs=30.4
Q ss_pred CeEEEECCChHHHHHHHHHHHcC----CcEEEEeeCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREG----HTVVVYEKGE 35 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g----~~v~v~e~~~ 35 (259)
.+|.|||+|.-|.+.|..|.+.| .+|+++++++
T Consensus 23 mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 47999999999999999999999 7999999865
No 474
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=95.04 E-value=0.027 Score=42.66 Aligned_cols=32 Identities=22% Similarity=0.486 Sum_probs=29.9
Q ss_pred eEEEECCChHHHHHHHHHHHcC-CcEEEEeeCC
Q 024975 4 HVAVIGAGAAGLVVGHELLREG-HTVVVYEKGE 35 (259)
Q Consensus 4 ~v~IIG~G~~Gl~~a~~L~~~g-~~v~v~e~~~ 35 (259)
+|.|||+|..|...|..|.+.| .+|.++++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 6999999999999999999999 9999999863
No 475
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=95.03 E-value=0.024 Score=43.77 Aligned_cols=32 Identities=25% Similarity=0.509 Sum_probs=30.1
Q ss_pred eEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 4 HVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 4 ~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
+|.|||+|..|...|..|.+.|.+|+++|+++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 69999999999999999999999999999874
No 476
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=95.02 E-value=0.021 Score=42.04 Aligned_cols=34 Identities=26% Similarity=0.430 Sum_probs=31.3
Q ss_pred CCeEEEECC-ChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 2 FRHVAVIGA-GAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 2 ~~~v~IIG~-G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
|++|+|.|| |..|..++..|.+.|.+|+++++++
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc
Confidence 468999996 9999999999999999999999974
No 477
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=95.02 E-value=0.011 Score=47.12 Aligned_cols=33 Identities=15% Similarity=0.107 Sum_probs=31.0
Q ss_pred CeEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 198 QVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 198 ~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
.+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~ 35 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHM 35 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 469999999999999999999999999999986
No 478
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.00 E-value=0.024 Score=39.03 Aligned_cols=34 Identities=18% Similarity=0.197 Sum_probs=31.3
Q ss_pred CCeEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 197 DQVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 197 ~~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
.++++|+|+|..|..++..|.+.+.+|+++.|.+
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 4679999999999999999999999999999975
No 479
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=94.99 E-value=0.049 Score=45.07 Aligned_cols=57 Identities=12% Similarity=0.087 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHhCCceeEEeceeEEEEEE-eCCCcEEEEEEecCCceEEEEeCEEEEccCCC
Q 024975 103 EEVLRYLQNFAREFGVDQVVRLHTEVLNARL-VESNKWKVKSRKKDDVVEEETFDAVVVCNGHF 165 (259)
Q Consensus 103 ~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~-~~~~~~~v~~~~g~~~~~~~~ad~VIlAtG~~ 165 (259)
.++.+.+.+.+.+.|.+ ++++++|++|.. .+++.+.|.+.+|. .+.||.||.|+|.+
T Consensus 256 ~~L~~aL~r~~~~~Gg~--i~l~t~V~~I~~d~~g~v~gV~~~~G~----~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGT--FMLNKNVVDFVFDDDNKVCGIKSSDGE----IAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--C--EESSCCEEEEEECTTSCEEEEEETTSC----EEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCE--EEeCCeEEEEEEecCCeEEEEEECCCc----EEECCEEEECCCcc
Confidence 57788888888899999 999999999998 44344678887654 79999999999954
No 480
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=94.99 E-value=0.028 Score=42.36 Aligned_cols=33 Identities=27% Similarity=0.413 Sum_probs=30.2
Q ss_pred CeEEEECCChHHHHHHHHHHHcCC-cEEEEeeCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGH-TVVVYEKGE 35 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~-~v~v~e~~~ 35 (259)
.+|+|||+|-.|..+|..|.+.|+ +++|+|.+.
T Consensus 29 ~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 29 SQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred CcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 589999999999999999999998 899999863
No 481
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=94.97 E-value=0.029 Score=42.94 Aligned_cols=33 Identities=30% Similarity=0.558 Sum_probs=30.4
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
++++|||+|..|.++|..|.+.|.+|++++++.
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 579999999999999999999999999999863
No 482
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=94.97 E-value=0.016 Score=46.51 Aligned_cols=33 Identities=18% Similarity=0.128 Sum_probs=31.0
Q ss_pred CeEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 198 QVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 198 ~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
.+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~ 36 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFD 36 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 469999999999999999999999999999886
No 483
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=94.96 E-value=0.017 Score=46.85 Aligned_cols=33 Identities=18% Similarity=0.154 Sum_probs=31.3
Q ss_pred CeEEEEccCcCHHHHHHHHhcccCe-EEEEecCC
Q 024975 198 QVVILIGHYASGLDIKRDLAGFAKE-VHIASRSV 230 (259)
Q Consensus 198 ~~v~viG~G~~a~e~a~~l~~~~~~-v~~~~r~~ 230 (259)
.+|+|||+|++|+-+|..|.+.|.+ |+++.|.+
T Consensus 5 ~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~ 38 (410)
T 3c96_A 5 IDILIAGAGIGGLSCALALHQAGIGKVTLLESSS 38 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCC
Confidence 5799999999999999999999999 99999987
No 484
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=94.95 E-value=0.038 Score=40.38 Aligned_cols=32 Identities=31% Similarity=0.499 Sum_probs=29.9
Q ss_pred eEEEECC-ChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 4 HVAVIGA-GAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 4 ~v~IIG~-G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
+|+|+|| |..|..++..|.++|.+|+++.+++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 6999997 9999999999999999999999974
No 485
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=94.94 E-value=0.023 Score=45.22 Aligned_cols=33 Identities=30% Similarity=0.357 Sum_probs=30.9
Q ss_pred CeEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 198 QVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 198 ~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
.+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 7 ~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 7 KRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 579999999999999999999999999999865
No 486
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=94.94 E-value=0.037 Score=43.73 Aligned_cols=34 Identities=15% Similarity=0.248 Sum_probs=30.2
Q ss_pred CCeEEEECC-ChHHHHHHHHHHHcCC--cEEEEeeCC
Q 024975 2 FRHVAVIGA-GAAGLVVGHELLREGH--TVVVYEKGE 35 (259)
Q Consensus 2 ~~~v~IIG~-G~~Gl~~a~~L~~~g~--~v~v~e~~~ 35 (259)
+.+|+|||+ |..|.++|+.|...|. +++++|.+.
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~ 44 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFA 44 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCH
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCc
Confidence 468999998 9999999999999885 899999863
No 487
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=94.94 E-value=0.027 Score=42.62 Aligned_cols=34 Identities=15% Similarity=0.266 Sum_probs=31.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
+.+|.|||+|..|...|..|.+.|.+|.++|+++
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~ 36 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQTPHELIISGSSL 36 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTSSCEEEEECSSH
T ss_pred ccEEEEECCCHHHHHHHHHHHhCCCeEEEECCCH
Confidence 4689999999999999999999999999999864
No 488
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=94.93 E-value=0.019 Score=44.37 Aligned_cols=33 Identities=27% Similarity=0.335 Sum_probs=29.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
|.+|.|||+|..|...|..|.+.|.+|+++| ++
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~ 35 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAINLARAGHQLHVTT-IG 35 (295)
T ss_dssp -CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SS
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CH
Confidence 4689999999999999999999999999998 64
No 489
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=94.93 E-value=0.017 Score=47.03 Aligned_cols=34 Identities=24% Similarity=0.281 Sum_probs=31.5
Q ss_pred CCeEEEEccCcCHHHHHHHHhccc-CeEEEEecCC
Q 024975 197 DQVVILIGHYASGLDIKRDLAGFA-KEVHIASRSV 230 (259)
Q Consensus 197 ~~~v~viG~G~~a~e~a~~l~~~~-~~v~~~~r~~ 230 (259)
..+|+|||+|.+|+-.|..|.+.| .+|+++++++
T Consensus 6 ~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~ 40 (424)
T 2b9w_A 6 DSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTD 40 (424)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCC
Confidence 467999999999999999999999 8999999877
No 490
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=94.92 E-value=0.025 Score=45.80 Aligned_cols=33 Identities=30% Similarity=0.297 Sum_probs=30.7
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
+.++|+|.|..|..+|..|...|.+|+++|+++
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 579999999999999999999999999999864
No 491
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=94.91 E-value=0.017 Score=46.53 Aligned_cols=33 Identities=15% Similarity=0.195 Sum_probs=31.2
Q ss_pred CeEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 198 QVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 198 ~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
.+|+|||+|.+|+-+|..|++.|.+|+++.|.+
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~ 37 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRP 37 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 469999999999999999999999999999987
No 492
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=94.90 E-value=0.016 Score=45.71 Aligned_cols=33 Identities=12% Similarity=0.023 Sum_probs=30.4
Q ss_pred CeEEEEccCcCHHHHHHHHhc---ccCeEEEEecCC
Q 024975 198 QVVILIGHYASGLDIKRDLAG---FAKEVHIASRSV 230 (259)
Q Consensus 198 ~~v~viG~G~~a~e~a~~l~~---~~~~v~~~~r~~ 230 (259)
.+|+|||+|.+|+-+|..|.+ .|.+|+++++.+
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~ 37 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKAD 37 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCC
Confidence 369999999999999999999 888999999875
No 493
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=94.89 E-value=0.033 Score=43.68 Aligned_cols=33 Identities=21% Similarity=0.351 Sum_probs=30.3
Q ss_pred CeEEEECCChHHHHHHHHHHHcCC--cEEEEeeCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGH--TVVVYEKGE 35 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~--~v~v~e~~~ 35 (259)
.+|+|||+|..|.++|+.|+..++ +++++|.+.
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMKDLADEVALVDVME 56 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCH
Confidence 589999999999999999999987 899999864
No 494
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=94.89 E-value=0.038 Score=43.39 Aligned_cols=34 Identities=21% Similarity=0.388 Sum_probs=30.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCC--cEEEEeeCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGH--TVVVYEKGE 35 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~--~v~v~e~~~ 35 (259)
..+|+|||+|..|.++|+.|...+. +++++|.+.
T Consensus 19 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~ 54 (331)
T 4aj2_A 19 QNKITVVGVGAVGMACAISILMKDLADELALVDVIE 54 (331)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCCh
Confidence 3689999999999999999999887 899999863
No 495
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=94.87 E-value=0.014 Score=47.00 Aligned_cols=33 Identities=27% Similarity=0.230 Sum_probs=31.0
Q ss_pred CeEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 198 QVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 198 ~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
.+|+|||+|.+|+-+|..|.+.|.+|++++|.+
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~ 35 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAGIDNVILERQT 35 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred ccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 369999999999999999999999999999987
No 496
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=94.87 E-value=0.016 Score=47.34 Aligned_cols=32 Identities=31% Similarity=0.365 Sum_probs=30.3
Q ss_pred eEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 199 VVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 199 ~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
+|+|||+|.+|+-.|..|.+.|.+|+++++++
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~ 34 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNAGKKVLLLEGGE 34 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECCcHHHHHHHHHHHHcCCeEEEEecCC
Confidence 69999999999999999999999999999876
No 497
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=94.84 E-value=0.016 Score=46.46 Aligned_cols=33 Identities=24% Similarity=0.411 Sum_probs=31.0
Q ss_pred CeEEEEccCcCHHHHHHHHhcccCeEEEEecCC
Q 024975 198 QVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (259)
Q Consensus 198 ~~v~viG~G~~a~e~a~~l~~~~~~v~~~~r~~ 230 (259)
.+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 6 ~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~ 38 (382)
T 1y56_B 6 SEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRF 38 (382)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 569999999999999999999999999999976
No 498
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=94.83 E-value=0.028 Score=49.16 Aligned_cols=34 Identities=29% Similarity=0.478 Sum_probs=31.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 2 ~~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
+.+|.|||+|.-|...|..|++.|++|+++|+++
T Consensus 312 ~~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 312 IKKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CcEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 3579999999999999999999999999999974
No 499
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=94.83 E-value=0.034 Score=45.91 Aligned_cols=33 Identities=27% Similarity=0.338 Sum_probs=30.7
Q ss_pred CeEEEECCChHHHHHHHHHHHcCCcEEEEeeCC
Q 024975 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (259)
Q Consensus 3 ~~v~IIG~G~~Gl~~a~~L~~~g~~v~v~e~~~ 35 (259)
+.++|+|+|..|.++|..|+..|.+|+++|+++
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 579999999999999999999999999999864
No 500
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=94.83 E-value=0.018 Score=48.12 Aligned_cols=33 Identities=21% Similarity=0.268 Sum_probs=30.4
Q ss_pred CeEEEEccCcCHHHHHHHHhcc-cCeEEEEecCC
Q 024975 198 QVVILIGHYASGLDIKRDLAGF-AKEVHIASRSV 230 (259)
Q Consensus 198 ~~v~viG~G~~a~e~a~~l~~~-~~~v~~~~r~~ 230 (259)
-.|+|||+|.+|+-+|..|++. |.+|+++++++
T Consensus 11 ~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~ 44 (513)
T 4gde_A 11 VDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNE 44 (513)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSS
T ss_pred CCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCC
Confidence 4699999999999999999875 89999999998
Done!