Query 024977
Match_columns 259
No_of_seqs 237 out of 2140
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 17:47:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024977.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024977hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g2e_A Peroxiredoxin; redox pr 100.0 2.2E-32 7.4E-37 221.6 12.4 151 68-255 2-155 (157)
2 4gqc_A Thiol peroxidase, perox 100.0 2.5E-32 8.6E-37 223.1 6.9 152 68-255 3-157 (164)
3 3uma_A Hypothetical peroxiredo 100.0 3.8E-28 1.3E-32 202.3 15.5 150 67-253 23-184 (184)
4 3mng_A Peroxiredoxin-5, mitoch 100.0 1.4E-27 4.9E-32 196.9 17.1 152 67-253 12-173 (173)
5 3sbc_A Peroxiredoxin TSA1; alp 99.9 4.9E-27 1.7E-31 199.7 14.8 145 68-255 21-178 (216)
6 3tue_A Tryparedoxin peroxidase 99.9 4.7E-27 1.6E-31 200.2 13.3 147 66-255 22-182 (219)
7 1tp9_A Peroxiredoxin, PRX D (t 99.9 1.7E-26 5.8E-31 187.6 15.1 147 69-253 3-162 (162)
8 3p7x_A Probable thiol peroxida 99.9 2.4E-26 8.4E-31 186.9 16.0 145 66-255 16-165 (166)
9 1psq_A Probable thiol peroxida 99.9 9.2E-26 3.2E-30 183.0 17.0 146 66-255 12-162 (163)
10 3ixr_A Bacterioferritin comigr 99.9 3E-26 1E-30 189.1 13.3 152 66-255 17-175 (179)
11 3keb_A Probable thiol peroxida 99.9 1E-25 3.6E-30 192.7 15.6 146 66-255 18-173 (224)
12 2wfc_A Peroxiredoxin 5, PRDX5; 99.9 3.2E-25 1.1E-29 181.6 17.3 149 69-254 2-160 (167)
13 3zrd_A Thiol peroxidase; oxido 99.9 7.8E-26 2.7E-30 190.3 13.8 148 66-254 48-200 (200)
14 1q98_A Thiol peroxidase, TPX; 99.9 1.2E-25 4E-30 182.9 13.7 147 67-254 14-165 (165)
15 4f82_A Thioredoxin reductase; 99.9 2.5E-25 8.7E-30 183.6 15.4 152 67-255 7-176 (176)
16 2yzh_A Probable thiol peroxida 99.9 2.5E-25 8.7E-30 181.6 14.9 147 67-255 18-169 (171)
17 3gkn_A Bacterioferritin comigr 99.9 2.6E-25 8.8E-30 179.5 14.2 149 69-255 6-159 (163)
18 1xiy_A Peroxiredoxin, pfaop; a 99.9 2.3E-25 8E-30 185.1 14.2 150 70-256 1-180 (182)
19 3drn_A Peroxiredoxin, bacterio 99.9 6.1E-25 2.1E-29 177.6 15.9 142 69-255 1-146 (161)
20 2xhf_A Peroxiredoxin 5; oxidor 99.9 6.3E-26 2.2E-30 186.7 9.5 151 67-254 11-170 (171)
21 1prx_A HORF6; peroxiredoxin, h 99.9 1.2E-24 4.1E-29 186.4 17.4 150 69-255 4-166 (224)
22 2v2g_A Peroxiredoxin 6; oxidor 99.9 6.2E-25 2.1E-29 189.3 15.4 149 70-255 3-162 (233)
23 2pwj_A Mitochondrial peroxired 99.9 6.1E-25 2.1E-29 180.4 14.5 146 71-253 8-171 (171)
24 1nm3_A Protein HI0572; hybrid, 99.9 3.5E-24 1.2E-28 184.5 16.9 151 69-256 2-165 (241)
25 1xcc_A 1-Cys peroxiredoxin; un 99.9 1.7E-24 5.7E-29 185.0 14.7 149 70-255 3-163 (220)
26 1xvw_A Hypothetical protein RV 99.9 5.6E-24 1.9E-28 170.9 16.7 146 69-256 8-158 (160)
27 1n8j_A AHPC, alkyl hydroperoxi 99.9 6.6E-24 2.3E-28 176.2 14.7 142 71-255 2-153 (186)
28 2c0d_A Thioredoxin peroxidase 99.9 5.9E-24 2E-28 181.7 14.8 143 69-255 24-181 (221)
29 3tjj_A Peroxiredoxin-4; thiore 99.9 7.1E-24 2.4E-28 184.9 14.4 147 66-255 58-217 (254)
30 2pn8_A Peroxiredoxin-4; thiore 99.9 1E-23 3.5E-28 178.8 14.5 147 66-255 15-174 (211)
31 3qpm_A Peroxiredoxin; oxidored 99.9 1.3E-23 4.6E-28 181.6 15.4 147 66-255 44-203 (240)
32 2a4v_A Peroxiredoxin DOT5; yea 99.9 1.1E-23 3.9E-28 169.6 13.1 131 67-239 4-137 (159)
33 2i81_A 2-Cys peroxiredoxin; st 99.9 1.9E-23 6.6E-28 177.3 15.1 145 67-255 18-177 (213)
34 1uul_A Tryparedoxin peroxidase 99.9 4.7E-23 1.6E-27 172.8 15.7 145 68-255 4-162 (202)
35 3a2v_A Probable peroxiredoxin; 99.9 3.9E-23 1.3E-27 179.6 15.4 144 69-255 4-159 (249)
36 3ztl_A Thioredoxin peroxidase; 99.9 5.2E-23 1.8E-27 175.6 15.2 146 67-255 37-195 (222)
37 1xvq_A Thiol peroxidase; thior 99.9 5E-23 1.7E-27 168.9 14.2 148 66-256 14-166 (175)
38 2jsy_A Probable thiol peroxida 99.9 3.3E-23 1.1E-27 167.9 12.6 145 66-255 14-164 (167)
39 1zye_A Thioredoxin-dependent p 99.9 7.1E-23 2.4E-27 174.5 15.3 147 66-255 23-182 (220)
40 1qmv_A Human thioredoxin perox 99.9 9E-23 3.1E-27 170.3 15.6 144 69-255 4-160 (197)
41 1we0_A Alkyl hydroperoxide red 99.9 1.6E-22 5.5E-27 167.2 14.9 143 70-255 1-154 (187)
42 2h01_A 2-Cys peroxiredoxin; th 99.9 7.1E-23 2.4E-27 170.1 12.4 141 71-255 1-156 (192)
43 2bmx_A Alkyl hydroperoxidase C 99.9 4.7E-22 1.6E-26 165.7 15.7 143 69-255 3-167 (195)
44 4eo3_A Bacterioferritin comigr 99.9 2.4E-22 8.2E-27 180.9 14.3 131 75-255 3-136 (322)
45 3u5r_E Uncharacterized protein 99.9 1E-21 3.6E-26 166.8 15.5 139 67-253 29-182 (218)
46 1zof_A Alkyl hydroperoxide-red 99.9 8.6E-22 2.9E-26 164.4 13.7 142 70-255 1-158 (198)
47 3kcm_A Thioredoxin family prot 99.9 1.5E-20 5E-25 149.4 16.3 137 70-255 2-143 (154)
48 1jfu_A Thiol:disulfide interch 99.9 1.1E-20 3.9E-25 155.3 16.1 147 67-258 31-183 (186)
49 2ywi_A Hypothetical conserved 99.9 1.8E-20 6.3E-25 155.1 17.0 139 67-253 15-169 (196)
50 1xzo_A BSSCO, hypothetical pro 99.9 7.7E-21 2.6E-25 154.2 13.6 155 65-255 2-169 (174)
51 3gl3_A Putative thiol:disulfid 99.9 2.2E-20 7.7E-25 148.0 15.7 137 69-255 2-142 (152)
52 3ewl_A Uncharacterized conserv 99.8 4.3E-20 1.5E-24 144.9 15.5 128 71-255 2-138 (142)
53 3eur_A Uncharacterized protein 99.8 5.5E-20 1.9E-24 144.8 14.9 130 68-254 3-141 (142)
54 3fw2_A Thiol-disulfide oxidore 99.8 6.5E-20 2.2E-24 145.7 14.6 120 68-236 3-134 (150)
55 4fo5_A Thioredoxin-like protei 99.8 2.7E-20 9.3E-25 146.7 12.2 131 67-254 4-141 (143)
56 3lwa_A Secreted thiol-disulfid 99.8 1.2E-19 4.2E-24 148.9 16.5 136 68-254 29-177 (183)
57 2lrt_A Uncharacterized protein 99.8 2.4E-19 8.1E-24 143.4 16.6 132 69-254 8-144 (152)
58 2obi_A PHGPX, GPX-4, phospholi 99.8 1.6E-19 5.4E-24 148.6 15.3 147 66-255 17-181 (183)
59 3hdc_A Thioredoxin family prot 99.8 1E-19 3.4E-24 145.9 13.7 137 66-253 11-150 (158)
60 2lrn_A Thiol:disulfide interch 99.8 2.5E-19 8.4E-24 142.6 15.4 133 69-255 2-141 (152)
61 3me7_A Putative uncharacterize 99.8 1.6E-19 5.6E-24 147.4 14.3 145 71-256 2-160 (170)
62 3hcz_A Possible thiol-disulfid 99.8 4.4E-20 1.5E-24 145.1 10.1 133 68-254 3-142 (148)
63 3eyt_A Uncharacterized protein 99.8 2E-19 6.9E-24 143.5 13.9 118 72-238 2-137 (158)
64 2f9s_A Thiol-disulfide oxidore 99.8 7E-19 2.4E-23 139.5 16.6 129 71-253 1-133 (151)
65 3kh7_A Thiol:disulfide interch 99.8 1E-18 3.6E-23 143.2 17.9 123 66-238 26-152 (176)
66 2gs3_A PHGPX, GPX-4, phospholi 99.8 3.6E-19 1.2E-23 147.0 14.5 95 67-168 20-126 (185)
67 2cvb_A Probable thiol-disulfid 99.8 7.4E-19 2.5E-23 144.8 16.0 100 68-175 5-114 (188)
68 3or5_A Thiol:disulfide interch 99.8 2.1E-18 7.2E-23 138.2 17.4 138 67-253 5-146 (165)
69 3lor_A Thiol-disulfide isomera 99.8 4E-19 1.4E-23 141.9 13.0 118 72-238 5-140 (160)
70 2l5o_A Putative thioredoxin; s 99.8 7.8E-19 2.7E-23 139.2 14.5 131 70-254 2-137 (153)
71 2v1m_A Glutathione peroxidase; 99.8 4.1E-19 1.4E-23 143.1 13.0 93 69-168 4-109 (169)
72 3fkf_A Thiol-disulfide oxidore 99.8 6.4E-19 2.2E-23 138.4 13.0 120 68-236 3-132 (148)
73 2p31_A CL683, glutathione pero 99.8 3.6E-19 1.2E-23 146.5 12.0 91 67-164 20-121 (181)
74 2k6v_A Putative cytochrome C o 99.8 1.8E-19 6.1E-24 145.6 9.4 149 69-255 9-170 (172)
75 3erw_A Sporulation thiol-disul 99.8 2.4E-18 8.2E-23 134.4 15.6 133 66-253 5-144 (145)
76 2p5q_A Glutathione peroxidase 99.8 1.3E-18 4.5E-23 140.2 13.5 94 68-168 4-110 (170)
77 2vup_A Glutathione peroxidase- 99.8 1.1E-18 3.9E-23 144.6 12.5 93 69-168 21-126 (190)
78 3dwv_A Glutathione peroxidase- 99.8 3.2E-19 1.1E-23 147.6 8.9 91 66-163 16-117 (187)
79 3ia1_A THIO-disulfide isomeras 99.8 3.9E-18 1.3E-22 135.4 13.2 130 68-255 3-141 (154)
80 2ls5_A Uncharacterized protein 99.6 2.5E-20 8.4E-25 149.4 0.0 138 68-255 5-148 (159)
81 2ggt_A SCO1 protein homolog, m 99.8 6.4E-18 2.2E-22 135.4 14.0 142 75-255 2-158 (164)
82 3kij_A Probable glutathione pe 99.8 3E-18 1E-22 140.7 11.9 89 70-165 12-111 (180)
83 2rli_A SCO2 protein homolog, m 99.8 2.6E-17 8.8E-22 132.9 16.8 139 77-254 7-160 (171)
84 2lja_A Putative thiol-disulfid 99.8 3.9E-18 1.3E-22 135.0 11.7 137 69-253 2-141 (152)
85 2b5x_A YKUV protein, TRXY; thi 99.8 9.5E-18 3.3E-22 131.4 13.7 119 70-238 1-130 (148)
86 2i3y_A Epididymal secretory gl 99.8 2E-17 6.7E-22 140.7 16.4 87 71-165 30-133 (215)
87 3ha9_A Uncharacterized thiored 99.8 2.5E-18 8.7E-23 138.4 9.9 129 69-255 10-161 (165)
88 2b7k_A SCO1 protein; metalloch 99.8 9.6E-18 3.3E-22 140.3 13.2 137 68-237 11-163 (200)
89 2f8a_A Glutathione peroxidase 99.8 1.2E-17 4.1E-22 141.0 13.9 90 69-165 19-125 (208)
90 2hyx_A Protein DIPZ; thioredox 99.7 1.5E-17 5.1E-22 151.3 15.3 124 66-238 47-184 (352)
91 2r37_A Glutathione peroxidase 99.7 2.9E-17 1E-21 138.7 16.0 87 71-165 12-115 (207)
92 3raz_A Thioredoxin-related pro 99.7 2.4E-17 8.3E-22 130.8 13.7 115 76-238 5-125 (151)
93 4evm_A Thioredoxin family prot 99.7 7.3E-17 2.5E-21 124.1 16.0 126 75-255 1-136 (138)
94 1lu4_A Soluble secreted antige 99.7 7.5E-17 2.6E-21 124.7 15.8 128 74-255 2-133 (136)
95 3cmi_A Peroxiredoxin HYR1; thi 99.7 6.2E-18 2.1E-22 137.4 8.8 87 72-166 8-105 (171)
96 2b1k_A Thiol:disulfide interch 99.7 9.2E-17 3.2E-21 129.5 15.4 119 67-237 19-144 (168)
97 4hde_A SCO1/SENC family lipopr 99.7 1.3E-16 4.4E-21 130.4 15.9 149 71-254 7-166 (170)
98 1zzo_A RV1677; thioredoxin fol 99.7 2.1E-16 7.2E-21 121.8 16.0 95 72-175 1-99 (136)
99 1i5g_A Tryparedoxin II; electr 99.7 1.1E-16 3.7E-21 125.9 12.6 97 72-175 3-106 (144)
100 1o8x_A Tryparedoxin, TRYX, TXN 99.7 9.1E-17 3.1E-21 126.8 10.9 97 71-175 3-106 (146)
101 1kng_A Thiol:disulfide interch 99.7 5.5E-16 1.9E-20 122.9 12.8 121 67-238 5-137 (156)
102 2h30_A Thioredoxin, peptide me 99.7 4E-16 1.4E-20 124.8 10.8 129 71-255 15-153 (164)
103 3s9f_A Tryparedoxin; thioredox 99.7 1.1E-16 3.8E-21 129.8 7.4 102 66-175 18-126 (165)
104 1o73_A Tryparedoxin; electron 99.7 2.3E-16 7.9E-21 123.7 8.3 98 70-175 2-106 (144)
105 2lus_A Thioredoxion; CR-Trp16, 99.4 4.3E-17 1.5E-21 127.5 0.0 99 74-175 2-106 (143)
106 4h86_A Peroxiredoxin type-2; o 99.6 1E-14 3.5E-19 121.5 14.3 150 67-253 23-199 (199)
107 2ju5_A Thioredoxin disulfide i 99.0 4.6E-10 1.6E-14 89.5 6.6 121 70-254 24-148 (154)
108 2l57_A Uncharacterized protein 98.9 6.2E-09 2.1E-13 79.4 10.0 62 76-142 6-67 (126)
109 3ul3_B Thioredoxin, thioredoxi 98.8 9.5E-08 3.2E-12 73.2 12.6 64 71-141 19-82 (128)
110 3fk8_A Disulphide isomerase; A 98.6 1.1E-07 3.7E-12 73.1 8.9 95 101-254 30-129 (133)
111 3p2a_A Thioredoxin 2, putative 98.5 8.3E-07 2.9E-11 69.4 11.3 67 71-142 30-96 (148)
112 2fwh_A Thiol:disulfide interch 98.5 5.2E-08 1.8E-12 75.4 3.3 93 70-169 4-104 (134)
113 3f3q_A Thioredoxin-1; His TAG, 98.5 1.5E-06 5.1E-11 64.5 10.7 39 101-141 25-63 (109)
114 4euy_A Uncharacterized protein 98.5 1.7E-06 5.8E-11 63.5 10.8 40 101-142 19-58 (105)
115 1nsw_A Thioredoxin, TRX; therm 98.5 3.2E-06 1.1E-10 61.6 12.2 41 101-142 18-58 (105)
116 3die_A Thioredoxin, TRX; elect 98.5 3.9E-06 1.3E-10 61.0 12.6 41 101-142 20-60 (106)
117 1xfl_A Thioredoxin H1; AT3G510 98.5 2.5E-06 8.7E-11 65.0 12.0 39 101-141 39-77 (124)
118 3zzx_A Thioredoxin; oxidoreduc 98.4 3.6E-06 1.2E-10 62.7 12.3 38 101-140 21-58 (105)
119 2voc_A Thioredoxin; electron t 98.4 2.3E-06 8E-11 63.6 11.2 42 101-143 18-59 (112)
120 2f51_A Thioredoxin; electron t 98.4 3.9E-07 1.3E-11 68.9 6.8 58 82-143 6-64 (118)
121 1t00_A Thioredoxin, TRX; redox 98.4 4E-06 1.4E-10 61.9 12.0 41 101-142 24-64 (112)
122 1x5d_A Protein disulfide-isome 98.4 2.9E-06 9.8E-11 64.6 11.2 42 101-142 26-70 (133)
123 3hxs_A Thioredoxin, TRXP; elec 98.4 1.8E-07 6.2E-12 72.5 4.4 84 81-170 36-119 (141)
124 1ep7_A Thioredoxin CH1, H-type 98.4 2.4E-06 8.3E-11 63.0 10.4 41 101-142 25-65 (112)
125 2ppt_A Thioredoxin-2; thiredox 98.4 2.9E-06 9.9E-11 67.4 11.4 41 101-142 65-105 (155)
126 1faa_A Thioredoxin F; electron 98.4 2.6E-06 9E-11 64.3 10.5 40 101-142 38-77 (124)
127 2i4a_A Thioredoxin; acidophIle 98.4 8E-06 2.7E-10 59.4 12.7 41 101-142 21-61 (107)
128 2trx_A Thioredoxin; electron t 98.4 4.9E-06 1.7E-10 60.9 11.6 41 101-142 21-61 (108)
129 3qfa_C Thioredoxin; protein-pr 98.4 1.4E-06 4.6E-11 65.6 8.7 40 101-142 32-71 (116)
130 3d6i_A Monothiol glutaredoxin- 98.4 2.2E-06 7.4E-11 63.5 9.7 43 101-143 22-64 (112)
131 2pu9_C TRX-F, thioredoxin F-ty 98.4 2.3E-06 7.9E-11 63.3 9.7 40 101-142 25-64 (111)
132 1w4v_A Thioredoxin, mitochondr 98.4 5.7E-06 2E-10 62.2 12.1 41 101-142 32-72 (119)
133 2vlu_A Thioredoxin, thioredoxi 98.4 6.3E-07 2.1E-11 67.5 6.6 41 101-143 35-75 (122)
134 1qgv_A Spliceosomal protein U5 98.4 3E-06 1E-10 66.4 10.6 41 101-142 24-64 (142)
135 3d22_A TRXH4, thioredoxin H-ty 98.4 2.5E-06 8.5E-11 65.8 9.9 40 101-142 47-86 (139)
136 2j23_A Thioredoxin; immune pro 98.4 1.3E-06 4.6E-11 66.0 8.1 42 101-142 34-75 (121)
137 2kuc_A Putative disulphide-iso 98.4 2.5E-06 8.6E-11 64.8 9.7 41 101-142 28-71 (130)
138 1thx_A Thioredoxin, thioredoxi 98.4 7.2E-06 2.5E-10 60.5 11.9 42 101-143 26-67 (115)
139 2e0q_A Thioredoxin; electron t 98.4 9.1E-06 3.1E-10 58.5 12.2 40 101-142 17-56 (104)
140 2o8v_B Thioredoxin 1; disulfid 98.3 3.9E-06 1.3E-10 64.3 10.1 41 101-142 41-81 (128)
141 1ti3_A Thioredoxin H, PTTRXH1; 98.3 6.5E-06 2.2E-10 60.6 11.1 40 101-142 27-66 (113)
142 2yzu_A Thioredoxin; redox prot 98.3 1.4E-05 4.7E-10 58.1 12.5 41 101-142 19-59 (109)
143 2vm1_A Thioredoxin, thioredoxi 98.3 5.2E-06 1.8E-10 61.7 10.1 40 101-142 29-68 (118)
144 3tco_A Thioredoxin (TRXA-1); d 98.3 1.6E-05 5.3E-10 57.9 12.6 40 101-141 22-61 (109)
145 2wz9_A Glutaredoxin-3; protein 98.3 9.3E-06 3.2E-10 64.0 12.0 42 101-144 33-74 (153)
146 2dj1_A Protein disulfide-isome 98.3 6.3E-06 2.1E-10 63.4 10.2 43 101-143 35-79 (140)
147 3gnj_A Thioredoxin domain prot 98.3 1.6E-05 5.4E-10 58.3 11.9 41 101-142 23-63 (111)
148 1gh2_A Thioredoxin-like protei 98.2 9.6E-06 3.3E-10 59.4 10.3 40 101-142 22-61 (107)
149 1zma_A Bacterocin transport ac 98.2 9.4E-06 3.2E-10 60.8 10.0 39 101-142 30-68 (118)
150 3hz4_A Thioredoxin; NYSGXRC, P 98.2 1.9E-05 6.4E-10 61.2 11.9 41 101-142 25-65 (140)
151 3uvt_A Thioredoxin domain-cont 98.2 1.2E-05 4E-10 58.9 10.3 42 101-142 22-65 (111)
152 3emx_A Thioredoxin; structural 98.2 3.2E-06 1.1E-10 65.3 7.1 40 102-144 33-72 (135)
153 2i1u_A Thioredoxin, TRX, MPT46 98.2 3.3E-05 1.1E-09 57.5 12.4 41 101-142 31-71 (121)
154 3qou_A Protein YBBN; thioredox 98.2 4.5E-06 1.5E-10 72.4 8.4 42 101-143 27-68 (287)
155 3dxb_A Thioredoxin N-terminall 98.2 8.7E-06 3E-10 68.3 9.4 43 101-144 31-73 (222)
156 1v98_A Thioredoxin; oxidoreduc 98.2 3.5E-05 1.2E-09 59.4 12.2 41 101-143 52-92 (140)
157 1z6n_A Hypothetical protein PA 98.1 2.9E-06 1E-10 68.7 5.0 66 101-169 55-123 (167)
158 3gix_A Thioredoxin-like protei 98.1 4.4E-06 1.5E-10 66.0 5.7 65 101-168 24-88 (149)
159 2l5l_A Thioredoxin; structural 98.1 7.1E-06 2.4E-10 63.2 6.8 66 101-169 39-105 (136)
160 3cxg_A Putative thioredoxin; m 98.1 1.2E-05 4E-10 62.0 7.8 38 101-141 41-78 (133)
161 2dj3_A Protein disulfide-isome 98.1 6.8E-06 2.3E-10 62.6 6.4 43 101-143 26-69 (133)
162 2l6c_A Thioredoxin; oxidoreduc 98.1 3.8E-05 1.3E-09 56.8 10.3 40 101-142 20-59 (110)
163 2dml_A Protein disulfide-isome 98.1 7E-06 2.4E-10 62.3 6.3 66 101-168 36-101 (130)
164 3f9u_A Putative exported cytoc 98.0 4E-06 1.4E-10 67.1 4.2 44 100-144 47-93 (172)
165 2djj_A PDI, protein disulfide- 98.0 8.3E-06 2.8E-10 61.0 5.6 43 101-143 26-72 (121)
166 1x5e_A Thioredoxin domain cont 98.0 1.9E-05 6.5E-10 59.6 7.5 44 101-145 24-67 (126)
167 1dby_A Chloroplast thioredoxin 98.0 1.6E-05 5.5E-10 58.0 6.8 44 101-145 20-63 (107)
168 3ed3_A Protein disulfide-isome 98.0 3.4E-05 1.2E-09 67.9 10.1 41 101-142 36-76 (298)
169 2oe3_A Thioredoxin-3; electron 98.0 1.1E-05 3.7E-10 60.5 5.9 43 101-145 31-73 (114)
170 1syr_A Thioredoxin; SGPP, stru 98.0 1.8E-05 6E-10 58.6 6.9 43 101-145 27-69 (112)
171 1wou_A Thioredoxin -related pr 98.0 1.5E-05 5E-10 60.5 6.5 61 101-177 25-92 (123)
172 3aps_A DNAJ homolog subfamily 98.0 8E-06 2.7E-10 61.3 4.8 69 101-171 22-90 (122)
173 1a8l_A Protein disulfide oxido 98.0 0.00012 4E-09 60.8 12.6 42 100-141 134-178 (226)
174 1fb6_A Thioredoxin M; electron 97.9 1.2E-05 4E-10 58.3 5.5 44 101-145 19-62 (105)
175 1sen_A Thioredoxin-like protei 97.9 3.9E-07 1.3E-11 73.2 -3.1 88 76-170 27-117 (164)
176 1xwb_A Thioredoxin; dimerizati 97.9 2.6E-05 8.8E-10 56.6 7.1 44 101-145 21-64 (106)
177 2vim_A Thioredoxin, TRX; thior 97.9 2.1E-05 7.2E-10 56.8 6.5 43 101-145 20-62 (104)
178 1mek_A Protein disulfide isome 97.9 5.3E-06 1.8E-10 61.5 2.3 41 101-141 25-67 (120)
179 2xc2_A Thioredoxinn; oxidoredu 97.8 2.4E-05 8.1E-10 58.3 5.7 42 101-145 34-75 (117)
180 3m9j_A Thioredoxin; oxidoreduc 97.8 4.3E-05 1.5E-09 55.3 6.7 42 101-144 21-62 (105)
181 1r26_A Thioredoxin; redox-acti 97.8 3.6E-05 1.2E-09 58.7 5.9 43 101-145 38-80 (125)
182 2qgv_A Hydrogenase-1 operon pr 97.8 4.7E-05 1.6E-09 59.8 6.6 53 101-176 36-90 (140)
183 3h79_A Thioredoxin-like protei 97.8 7.3E-05 2.5E-09 56.6 7.6 45 101-145 34-82 (127)
184 3q6o_A Sulfhydryl oxidase 1; p 97.8 6.6E-05 2.3E-09 63.6 8.1 43 101-143 31-75 (244)
185 2dj0_A Thioredoxin-related tra 97.8 1.8E-05 6E-10 61.0 4.0 43 101-143 27-69 (137)
186 3idv_A Protein disulfide-isome 97.7 4.5E-05 1.5E-09 63.8 6.6 45 101-145 33-79 (241)
187 3iv4_A Putative oxidoreductase 97.7 0.00016 5.6E-09 54.5 8.6 37 101-140 25-61 (112)
188 2qsi_A Putative hydrogenase ex 97.6 0.00034 1.2E-08 54.7 9.7 53 101-176 34-88 (137)
189 3ira_A Conserved protein; meth 97.6 0.0003 1E-08 57.2 9.0 37 219-255 104-144 (173)
190 2dbc_A PDCL2, unnamed protein 97.6 0.00012 4.1E-09 56.4 6.2 42 101-144 31-72 (135)
191 2es7_A Q8ZP25_salty, putative 97.6 5.2E-05 1.8E-09 59.5 4.0 39 101-142 36-78 (142)
192 2av4_A Thioredoxin-like protei 97.6 0.00014 5E-09 58.2 6.5 43 101-144 42-84 (160)
193 3apq_A DNAJ homolog subfamily 97.5 5.8E-05 2E-09 62.5 4.4 44 101-145 115-158 (210)
194 2yj7_A LPBCA thioredoxin; oxid 96.7 1.2E-05 4.2E-10 58.0 0.0 42 101-143 20-61 (106)
195 1oaz_A Thioredoxin 1; immune s 97.5 0.00017 5.9E-09 54.6 6.3 41 101-142 22-76 (123)
196 1wmj_A Thioredoxin H-type; str 97.5 2.6E-05 8.9E-10 58.9 1.4 43 101-145 37-79 (130)
197 1fo5_A Thioredoxin; disulfide 97.5 8.9E-05 3.1E-09 51.5 3.7 42 101-143 3-44 (85)
198 2lst_A Thioredoxin; structural 96.6 1.8E-05 6.3E-10 60.0 0.0 77 86-169 9-92 (130)
199 3t58_A Sulfhydryl oxidase 1; o 97.4 0.00019 6.3E-09 68.1 5.8 43 101-143 31-75 (519)
200 3kp8_A Vkorc1/thioredoxin doma 97.4 1.5E-05 5.1E-10 59.4 -1.5 38 88-129 4-41 (106)
201 1nho_A Probable thioredoxin; b 97.3 0.0001 3.4E-09 51.2 2.6 40 103-143 4-43 (85)
202 3ph9_A Anterior gradient prote 97.2 0.00013 4.4E-09 58.0 2.8 73 101-175 45-120 (151)
203 2hls_A Protein disulfide oxido 97.2 0.00068 2.3E-08 57.6 7.5 45 101-145 139-186 (243)
204 3gyk_A 27KDA outer membrane pr 97.2 0.00073 2.5E-08 53.9 7.3 39 100-140 22-60 (175)
205 1ilo_A Conserved hypothetical 97.2 0.00073 2.5E-08 46.0 5.6 35 105-140 4-38 (77)
206 3ga4_A Dolichyl-diphosphooligo 97.2 0.0011 3.9E-08 54.0 7.5 44 101-144 38-92 (178)
207 3qcp_A QSOX from trypanosoma b 97.1 0.00048 1.6E-08 64.4 5.6 45 101-145 43-94 (470)
208 3evi_A Phosducin-like protein 97.1 0.00074 2.5E-08 51.2 5.5 39 102-142 25-63 (118)
209 1eej_A Thiol:disulfide interch 97.1 0.0011 3.8E-08 55.2 6.8 38 100-141 86-123 (216)
210 2b5e_A Protein disulfide-isome 97.0 0.0013 4.3E-08 61.6 7.6 45 101-145 32-76 (504)
211 1a0r_P Phosducin, MEKA, PP33; 97.0 0.00073 2.5E-08 57.9 5.4 41 101-143 134-174 (245)
212 3f8u_A Protein disulfide-isome 97.0 0.00085 2.9E-08 62.2 6.2 44 101-144 371-415 (481)
213 2ywm_A Glutaredoxin-like prote 97.0 0.0012 4.2E-08 54.8 6.5 43 100-144 136-178 (229)
214 2r2j_A Thioredoxin domain-cont 96.9 0.0016 5.6E-08 58.8 7.4 45 101-145 23-72 (382)
215 3idv_A Protein disulfide-isome 96.9 0.0012 4E-08 55.0 6.0 44 101-144 148-193 (241)
216 3uem_A Protein disulfide-isome 96.8 0.0017 5.9E-08 57.8 6.4 43 101-143 268-311 (361)
217 1sji_A Calsequestrin 2, calseq 96.7 0.0014 4.7E-08 58.5 5.2 44 101-145 29-79 (350)
218 3f8u_A Protein disulfide-isome 96.6 0.0029 1E-07 58.6 6.7 44 101-145 22-65 (481)
219 2trc_P Phosducin, MEKA, PP33; 96.6 0.0018 6.2E-08 54.2 4.7 40 101-142 121-160 (217)
220 2b5e_A Protein disulfide-isome 96.5 0.0016 5.5E-08 60.8 4.4 42 101-142 377-420 (504)
221 3apo_A DNAJ homolog subfamily 96.3 0.0065 2.2E-07 59.8 7.5 44 101-145 676-719 (780)
222 3hd5_A Thiol:disulfide interch 96.3 0.0053 1.8E-07 49.7 5.7 41 101-142 26-66 (195)
223 2e7p_A Glutaredoxin; thioredox 96.2 0.0023 7.8E-08 47.2 2.7 24 102-126 21-44 (116)
224 3apo_A DNAJ homolog subfamily 96.2 0.0077 2.6E-07 59.3 7.1 45 101-146 456-500 (780)
225 2znm_A Thiol:disulfide interch 96.2 0.0051 1.7E-07 49.7 4.8 41 100-141 22-62 (195)
226 1ego_A Glutaredoxin; electron 96.1 0.0077 2.6E-07 41.6 4.8 37 104-142 3-39 (85)
227 2fgx_A Putative thioredoxin; N 95.8 0.0097 3.3E-07 44.3 4.5 38 103-143 31-68 (107)
228 2k8s_A Thioredoxin; dimer, str 95.8 0.015 5.1E-07 40.0 5.3 35 105-142 5-39 (80)
229 2ywm_A Glutaredoxin-like prote 95.8 0.018 6.2E-07 47.5 6.6 45 100-144 21-70 (229)
230 3h93_A Thiol:disulfide interch 95.7 0.013 4.6E-07 47.2 5.5 41 100-141 25-65 (192)
231 1a8l_A Protein disulfide oxido 95.7 0.019 6.4E-07 47.2 6.5 42 100-143 22-64 (226)
232 1wjk_A C330018D20RIK protein; 95.7 0.0078 2.7E-07 43.8 3.7 37 101-142 16-52 (100)
233 1h75_A Glutaredoxin-like prote 95.5 0.031 1.1E-06 38.2 6.1 47 104-157 3-52 (81)
234 1z6m_A Conserved hypothetical 95.4 0.043 1.5E-06 43.3 7.2 42 100-141 27-69 (175)
235 3us3_A Calsequestrin-1; calciu 95.4 0.039 1.3E-06 49.4 7.7 45 101-145 31-81 (367)
236 1hyu_A AHPF, alkyl hydroperoxi 95.2 0.03 1E-06 52.7 6.5 43 100-144 117-159 (521)
237 1t3b_A Thiol:disulfide interch 95.1 0.02 6.9E-07 47.3 4.6 36 100-139 86-121 (211)
238 1r7h_A NRDH-redoxin; thioredox 95.0 0.05 1.7E-06 36.3 5.6 34 105-145 4-37 (75)
239 3hz8_A Thiol:disulfide interch 94.9 0.031 1.1E-06 45.4 5.0 41 101-142 25-65 (193)
240 3dml_A Putative uncharacterize 94.5 0.014 4.9E-07 44.0 2.0 25 101-125 19-43 (116)
241 2rem_A Disulfide oxidoreductas 94.4 0.056 1.9E-06 43.3 5.5 41 100-141 25-65 (193)
242 1v58_A Thiol:disulfide interch 94.2 0.066 2.2E-06 45.1 5.7 38 100-140 97-134 (241)
243 2dlx_A UBX domain-containing p 94.2 0.15 5E-06 40.2 7.3 65 101-168 43-114 (153)
244 1ttz_A Conserved hypothetical 94.2 0.042 1.4E-06 39.0 3.7 46 104-157 3-49 (87)
245 2klx_A Glutaredoxin; thioredox 93.6 0.13 4.5E-06 35.8 5.5 46 104-157 8-57 (89)
246 1kte_A Thioltransferase; redox 93.0 0.064 2.2E-06 38.5 3.1 22 103-125 14-35 (105)
247 3qmx_A Glutaredoxin A, glutare 93.0 0.2 6.8E-06 36.1 5.8 32 106-144 20-51 (99)
248 1un2_A DSBA, thiol-disulfide i 93.0 0.032 1.1E-06 45.7 1.6 40 101-142 115-157 (197)
249 3rdw_A Putative arsenate reduc 92.9 0.28 9.7E-06 36.9 6.7 66 104-177 7-77 (121)
250 1wik_A Thioredoxin-like protei 92.9 0.26 8.8E-06 36.0 6.3 53 103-164 17-77 (109)
251 3c1r_A Glutaredoxin-1; oxidize 92.9 0.13 4.4E-06 38.3 4.7 30 107-143 30-63 (118)
252 2djk_A PDI, protein disulfide- 92.8 0.13 4.3E-06 38.9 4.6 42 101-144 24-65 (133)
253 1fov_A Glutaredoxin 3, GRX3; a 92.7 0.28 9.4E-06 33.1 6.0 44 107-157 6-53 (82)
254 2yan_A Glutaredoxin-3; oxidore 92.4 0.21 7.1E-06 36.1 5.2 49 101-157 18-74 (105)
255 2hze_A Glutaredoxin-1; thiored 92.3 0.23 7.7E-06 36.5 5.4 33 102-142 20-55 (114)
256 3l78_A Regulatory protein SPX; 92.1 0.42 1.4E-05 35.8 6.8 66 104-177 2-71 (120)
257 1z3e_A Regulatory protein SPX; 92.0 0.76 2.6E-05 34.8 8.2 65 104-176 3-71 (132)
258 2khp_A Glutaredoxin; thioredox 91.9 0.35 1.2E-05 33.6 5.8 46 105-157 9-58 (92)
259 3l9v_A Putative thiol-disulfid 91.8 0.093 3.2E-06 42.3 3.0 39 101-141 16-57 (189)
260 3feu_A Putative lipoprotein; a 91.7 0.14 4.9E-06 41.1 3.9 35 101-139 24-58 (185)
261 3fz4_A Putative arsenate reduc 91.6 0.78 2.7E-05 34.4 7.7 67 103-177 4-74 (120)
262 2kok_A Arsenate reductase; bru 91.5 0.27 9.3E-06 36.8 5.0 64 104-177 7-74 (120)
263 3uem_A Protein disulfide-isome 91.1 0.3 1E-05 43.0 5.8 42 101-143 136-177 (361)
264 2cq9_A GLRX2 protein, glutared 90.8 0.4 1.4E-05 36.2 5.5 30 107-143 32-61 (130)
265 1pn0_A Phenol 2-monooxygenase; 90.6 3 0.0001 40.2 12.8 57 69-125 478-535 (665)
266 3gkx_A Putative ARSC family re 90.4 0.66 2.3E-05 34.8 6.3 65 104-176 6-74 (120)
267 1s3c_A Arsenate reductase; ARS 90.1 0.46 1.6E-05 36.8 5.3 66 104-177 4-73 (141)
268 3nzn_A Glutaredoxin; structura 90.0 0.23 8E-06 35.7 3.4 21 104-124 24-44 (103)
269 3f0i_A Arsenate reductase; str 90.0 0.74 2.5E-05 34.4 6.3 66 104-177 6-76 (119)
270 1rw1_A Conserved hypothetical 89.7 0.25 8.6E-06 36.6 3.4 64 104-177 2-69 (114)
271 2lqo_A Putative glutaredoxin R 89.6 0.52 1.8E-05 33.6 4.9 46 105-157 7-57 (92)
272 3ctg_A Glutaredoxin-2; reduced 89.5 0.49 1.7E-05 35.8 5.0 30 106-142 41-74 (129)
273 2hls_A Protein disulfide oxido 89.4 0.49 1.7E-05 39.6 5.4 44 100-144 26-75 (243)
274 3h8q_A Thioredoxin reductase 3 89.4 0.8 2.7E-05 33.6 6.0 33 101-142 18-50 (114)
275 3rhb_A ATGRXC5, glutaredoxin-C 88.9 0.28 9.6E-06 35.8 3.1 29 107-142 24-52 (113)
276 1aba_A Glutaredoxin; electron 88.9 1.5 5E-05 30.2 6.8 30 106-142 4-37 (87)
277 2wci_A Glutaredoxin-4; redox-a 88.4 0.51 1.8E-05 36.2 4.4 54 103-165 37-98 (135)
278 2qc7_A ERP31, ERP28, endoplasm 88.3 0.66 2.3E-05 39.1 5.4 39 101-143 23-64 (240)
279 2dkh_A 3-hydroxybenzoate hydro 88.0 3.7 0.00013 39.2 11.2 40 70-110 467-507 (639)
280 2wem_A Glutaredoxin-related pr 87.6 1.1 3.9E-05 33.3 5.9 55 102-165 21-84 (118)
281 3kp9_A Vkorc1/thioredoxin doma 87.3 0.17 5.9E-06 44.1 1.2 39 87-129 188-226 (291)
282 2c0g_A ERP29 homolog, windbeut 86.9 1.4 4.9E-05 37.3 6.7 39 101-143 34-76 (248)
283 3gx8_A Monothiol glutaredoxin- 86.9 1.8 6.2E-05 32.2 6.7 55 102-165 17-82 (121)
284 2ht9_A Glutaredoxin-2; thiored 86.6 0.5 1.7E-05 36.6 3.4 18 107-124 54-71 (146)
285 3ic4_A Glutaredoxin (GRX-1); s 86.3 0.42 1.4E-05 33.2 2.6 21 104-124 14-34 (92)
286 3gv1_A Disulfide interchange p 86.1 0.69 2.4E-05 35.9 4.0 34 100-139 14-47 (147)
287 3l9s_A Thiol:disulfide interch 86.0 0.57 1.9E-05 37.8 3.6 38 101-140 23-63 (191)
288 3msz_A Glutaredoxin 1; alpha-b 85.9 0.57 1.9E-05 32.0 3.1 21 103-123 5-25 (89)
289 3ipz_A Monothiol glutaredoxin- 85.8 1.4 4.7E-05 32.1 5.4 55 102-165 19-81 (109)
290 3zyw_A Glutaredoxin-3; metal b 83.4 1.6 5.6E-05 31.9 4.8 47 110-165 29-79 (111)
291 3gn3_A Putative protein-disulf 83.2 1.3 4.4E-05 35.5 4.5 40 100-139 14-53 (182)
292 3ihg_A RDME; flavoenzyme, anth 82.8 8.8 0.0003 35.4 10.8 35 68-106 418-452 (535)
293 3bci_A Disulfide bond protein 82.4 1.8 6.1E-05 34.1 5.1 40 100-139 11-52 (186)
294 2ct6_A SH3 domain-binding glut 81.8 4.4 0.00015 29.4 6.7 45 106-153 12-59 (111)
295 4dvc_A Thiol:disulfide interch 81.5 2 6.7E-05 33.4 5.0 37 101-139 23-59 (184)
296 3c7m_A Thiol:disulfide interch 80.9 4 0.00014 31.9 6.7 39 101-141 19-58 (195)
297 3tdg_A DSBG, putative uncharac 79.7 2.6 8.7E-05 36.3 5.3 39 101-142 148-186 (273)
298 3gmf_A Protein-disulfide isome 79.7 3.2 0.00011 33.8 5.8 41 100-140 15-57 (205)
299 3f4s_A Alpha-DSBA1, putative u 77.6 3.5 0.00012 34.1 5.5 40 100-139 39-80 (226)
300 1t1v_A SH3BGRL3, SH3 domain-bi 76.6 3.9 0.00013 28.4 4.8 35 107-144 7-43 (93)
301 3gha_A Disulfide bond formatio 75.8 4.8 0.00016 32.5 5.8 41 100-140 29-71 (202)
302 1nm3_A Protein HI0572; hybrid, 72.0 3.8 0.00013 33.7 4.3 47 104-157 172-221 (241)
303 2wul_A Glutaredoxin related pr 70.0 11 0.00036 28.1 6.0 62 92-165 14-84 (118)
304 1u6t_A SH3 domain-binding glut 69.5 10 0.00034 28.4 5.7 48 104-154 2-52 (121)
305 3l4n_A Monothiol glutaredoxin- 68.7 3.8 0.00013 30.8 3.3 56 103-165 16-78 (127)
306 3dex_A SAV_2001; alpha-beta pr 62.9 3.5 0.00012 30.3 2.0 35 219-256 52-87 (107)
307 4f9z_D Endoplasmic reticulum r 55.6 21 0.00072 28.8 5.8 42 101-143 132-173 (227)
308 2in3_A Hypothetical protein; D 54.6 26 0.00089 27.7 6.2 38 101-139 7-44 (216)
309 2p0g_A Selenoprotein W-related 50.9 8.9 0.00031 28.0 2.4 36 219-256 43-79 (105)
310 4as2_A Phosphorylcholine phosp 49.6 16 0.00053 32.0 4.2 44 120-163 146-193 (327)
311 2ojl_A Hypothetical protein; B 49.5 9 0.00031 28.2 2.2 35 219-255 48-83 (108)
312 3ghf_A Septum site-determining 48.8 23 0.00078 26.2 4.5 37 121-157 62-98 (120)
313 2oka_A Hypothetical protein; P 47.4 10 0.00034 27.7 2.2 35 219-255 45-80 (104)
314 2npb_A Selenoprotein W; struct 47.2 9.7 0.00033 27.3 2.1 35 219-255 43-78 (96)
315 2fa8_A Hypothetical protein AT 45.3 11 0.00039 27.4 2.2 34 220-255 48-82 (105)
316 2r47_A Uncharacterized protein 43.0 14 0.00049 28.9 2.6 73 89-166 75-147 (157)
317 3pe6_A Monoglyceride lipase; a 42.0 81 0.0028 24.8 7.4 57 80-141 21-77 (303)
318 2axo_A Hypothetical protein AT 40.2 22 0.00074 30.4 3.5 37 101-140 43-79 (270)
319 2ec4_A FAS-associated factor 1 39.2 58 0.002 25.6 5.8 46 100-146 55-103 (178)
320 3kzq_A Putative uncharacterize 38.3 62 0.0021 25.5 6.0 37 103-140 4-40 (208)
321 2x8g_A Thioredoxin glutathione 37.4 34 0.0012 32.0 4.8 21 103-124 20-40 (598)
322 3hju_A Monoglyceride lipase; a 35.6 1.3E+02 0.0044 24.6 7.8 61 76-141 34-95 (342)
323 4hde_A SCO1/SENC family lipopr 30.9 28 0.00095 26.7 2.6 39 79-128 25-64 (170)
324 3fvv_A Uncharacterized protein 30.8 91 0.0031 24.2 5.8 39 119-157 94-132 (232)
325 3f9u_A Putative exported cytoc 30.8 21 0.00073 27.1 1.8 35 217-255 128-163 (172)
326 2imf_A HCCA isomerase, 2-hydro 30.6 71 0.0024 25.0 5.1 33 104-139 3-35 (203)
327 2p9j_A Hypothetical protein AQ 29.7 93 0.0032 22.9 5.4 35 123-157 42-76 (162)
328 3v7e_A Ribosome-associated pro 29.6 1.2E+02 0.0042 20.4 5.5 54 123-178 17-74 (82)
329 4gxt_A A conserved functionall 29.5 49 0.0017 29.5 4.2 38 119-156 223-260 (385)
330 2pr7_A Haloacid dehalogenase/e 29.3 52 0.0018 23.1 3.8 35 118-152 19-53 (137)
331 4ev1_A Anabena TIC22; TIC22 fo 27.9 92 0.0031 26.2 5.4 65 74-146 12-90 (252)
332 3gl5_A Putative DSBA oxidoredu 26.7 68 0.0023 26.2 4.4 39 101-139 2-41 (239)
333 3hug_B Probable conserved memb 25.5 37 0.0013 24.8 2.2 23 110-132 52-74 (108)
334 3ga8_A HTH-type transcriptiona 25.3 37 0.0013 22.8 2.1 30 101-130 28-63 (78)
335 3umv_A Deoxyribodipyrimidine p 24.9 2.5E+02 0.0084 25.9 8.3 62 101-165 69-137 (506)
336 2jvx_A NF-kappa-B essential mo 24.9 4.4 0.00015 22.3 -2.2 20 111-130 5-24 (28)
337 1xcr_A Hypothetical protein PT 24.5 44 0.0015 29.0 2.8 27 217-244 201-228 (316)
338 1r4w_A Glutathione S-transfera 23.2 66 0.0023 25.8 3.6 35 102-139 6-40 (226)
339 2q1z_B Anti-sigma factor CHRR, 22.4 54 0.0018 26.1 2.8 21 110-130 33-53 (195)
No 1
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=99.98 E-value=2.2e-32 Score=221.65 Aligned_cols=151 Identities=19% Similarity=0.325 Sum_probs=129.7
Q ss_pred CCcccCCCCCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCChHHH
Q 024977 68 FPANVGDLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTPNKA 147 (259)
Q Consensus 68 ~~~~vG~~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~~~~ 147 (259)
.++++|+++|+|++.|.+|+.++|++++|+ ++||+|||++|||+|+.+++.|++.++++++.|+.+++||.++++.+
T Consensus 2 ~~l~vG~~aPdF~l~~~~G~~~~l~d~~Gk---~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d~~~~~ 78 (157)
T 4g2e_A 2 HMVEIGELAPDFELPDTELKKVKLSALKGK---VVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVDPPFSN 78 (157)
T ss_dssp CCCCTTSBCCCCEEEBTTSCEEEGGGGTTS---CEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESSCHHHH
T ss_pred CcCCCCCCCcCeEeECCCCCEEeHHHHCCC---eEEEEecCCCCCCccccchhhcccccccccccCceEeeecccchhHH
Confidence 578999999999999999999999999986 89999999999999999999999999999999999999999999999
Q ss_pred HHHHh--hCCCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCccccCeEEE
Q 024977 148 QILAE--RLPFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSVLQQGGMFV 225 (259)
Q Consensus 148 ~~f~~--~~~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gg~fV 225 (259)
++|++ +++|| +++|++++++++||+..... ..+ +.....|++||
T Consensus 79 ~~~~~~~~~~~p---~l~D~~~~v~~~ygv~~~~~----------------------------~~~---~~~~~~p~tfl 124 (157)
T 4g2e_A 79 KAFKEHNKLNFT---ILSDYNREVVKKYNVAWEFP----------------------------ALP---GYVLAKRAVFV 124 (157)
T ss_dssp HHHHHHTTCCSE---EEECTTSHHHHHTTCEEECT----------------------------TST---TCEEECEEEEE
T ss_pred HHHHHHcCCcEE---EEEcCCcHHHHHcCCccccc----------------------------cCC---CcceeeeeEEE
Confidence 99998 56777 99999999999999965311 011 23567899999
Q ss_pred Ee-CCeEEEEEecCCCCCCCCHHHHHHHhcc
Q 024977 226 FK-GKQLLYARKDEGTGDHASLDDVFDICCK 255 (259)
Q Consensus 226 id-~g~V~y~~~~~~~~d~~~~~~iL~a~~~ 255 (259)
|| +|+|+|.|+..++.+++++++|++++++
T Consensus 125 ID~~G~I~~~~~~~~~~~~~~~~eil~~l~~ 155 (157)
T 4g2e_A 125 IDKEGKVRYKWVSDDPTKEPPYDEIEKVVKS 155 (157)
T ss_dssp ECTTSBEEEEEEESSTTCCCCHHHHHHHHHH
T ss_pred ECCCCEEEEEEECCCCCCCCCHHHHHHHHHH
Confidence 99 8999999999999999999999999865
No 2
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=99.97 E-value=2.5e-32 Score=223.13 Aligned_cols=152 Identities=20% Similarity=0.337 Sum_probs=133.0
Q ss_pred CCcccCCCCCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCChHHH
Q 024977 68 FPANVGDLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTPNKA 147 (259)
Q Consensus 68 ~~~~vG~~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~~~~ 147 (259)
.++++|+++|+|+++|.+|+.++|+|+.++ ++++||+|||++|||+|+.+++.|++.+++|++.|+++++||.++++.+
T Consensus 3 gml~vG~~aPdF~l~~~~G~~v~Lsd~~~~-Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~d~~~~~ 81 (164)
T 4gqc_A 3 GLVELGEKAPDFTLPNQDFEPVNLYEVLKR-GRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVDSPWCL 81 (164)
T ss_dssp -CCCTTSBCCCCEEEBTTSCEEEHHHHHHT-SSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEESSCHHHH
T ss_pred CcccCCCCCcCcEeECCCCCEEEHHHHhcC-CCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecCCCHHHH
Confidence 468999999999999999999999999533 1389999999999999999999999999999999999999999999999
Q ss_pred HHHHh--hCCCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCccccCeEEE
Q 024977 148 QILAE--RLPFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSVLQQGGMFV 225 (259)
Q Consensus 148 ~~f~~--~~~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gg~fV 225 (259)
++|++ +++|| +++|++++++++||+..... . + ......|++||
T Consensus 82 ~~~~~~~~~~fp---~l~D~~~~v~~~ygv~~~~~---------------------------~---~--~~~~~~p~tfl 126 (164)
T 4gqc_A 82 KKFKDENRLAFN---LLSDYNREVIKLYNVYHEDL---------------------------K---G--LKMVAKRAVFI 126 (164)
T ss_dssp HHHHHHTTCCSE---EEECTTSHHHHHTTCEEEEE---------------------------T---T--EEEEECCEEEE
T ss_pred HHHHHhcCcccc---eeecCchHHHHHcCCccccc---------------------------c---c--CcCCeeeEEEE
Confidence 99998 57777 99999999999999953210 0 0 01456789999
Q ss_pred Ee-CCeEEEEEecCCCCCCCCHHHHHHHhcc
Q 024977 226 FK-GKQLLYARKDEGTGDHASLDDVFDICCK 255 (259)
Q Consensus 226 id-~g~V~y~~~~~~~~d~~~~~~iL~a~~~ 255 (259)
|| +|+|+|.|+..++.++|+++++|+++++
T Consensus 127 ID~~G~I~~~~~~~~~~~~~~~~eil~~l~~ 157 (164)
T 4gqc_A 127 VKPDGTVAYKWVTDNPLNEPDYDEVVREANK 157 (164)
T ss_dssp ECTTSBEEEEEECSCTTCCCCHHHHHHHHHH
T ss_pred ECCCCEEEEEEEeCCCCCCCCHHHHHHHHHH
Confidence 99 8999999999999999999999998865
No 3
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=99.96 E-value=3.8e-28 Score=202.29 Aligned_cols=150 Identities=13% Similarity=0.103 Sum_probs=129.8
Q ss_pred CCCcccCCCCCCcEEecC--CC-CeEeccc-ccccCCCcEEEEEEcCCCCHhhHH-HHHHHHHHHHHHhhCCcE-EEEEe
Q 024977 67 EFPANVGDLLGDFSIFTA--AG-EPVLFKD-LWDQNEGVAVVALLRHFGCPCCWE-LASALKESKARFDSAGVK-LIAVG 140 (259)
Q Consensus 67 ~~~~~vG~~aPdf~l~d~--~G-~~v~lsd-l~~~~~~~vvL~f~r~~~Cp~C~~-~l~~L~~~~~~~~~~gv~-vv~Vs 140 (259)
..++++|+++|+|++.+. +| +.++|++ +.|+ ++||+|||++|||+|+. |++.|++++++|+++|++ |++||
T Consensus 23 ~~~l~vG~~aPdf~l~~~~~~G~~~v~L~d~~~Gk---~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is 99 (184)
T 3uma_A 23 MMTIAVGDKLPNATFKEKTADGPVEVTTELLFKGK---RVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVA 99 (184)
T ss_dssp SSCCCTTCBCCCCEEEEEETTEEEEEEHHHHHTTS---EEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEE
T ss_pred cCcCCCCCCCCCcEeecccCCCceEEeHHHHhCCC---CEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEE
Confidence 456899999999999998 89 9999999 6775 89999999999999999 899999999999999999 99999
Q ss_pred CCChHHHHHHHh--hCC--CCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCC
Q 024977 141 VGTPNKAQILAE--RLP--FPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSS 216 (259)
Q Consensus 141 ~~~~~~~~~f~~--~~~--fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~ 216 (259)
.++++.+++|++ +++ || +++|++++++++||+..... . . + -+
T Consensus 100 ~d~~~~~~~f~~~~~~~~~fp---~l~D~~~~va~~yGv~~~~~-------~------------------~----g--~g 145 (184)
T 3uma_A 100 VNDLHVMGAWATHSGGMGKIH---FLSDWNAAFTKAIGMEIDLS-------A------------------G----T--LG 145 (184)
T ss_dssp SSCHHHHHHHHHHHTCTTTSE---EEECTTCHHHHHTTCEEEEG-------G------------------G----T--CE
T ss_pred CCCHHHHHHHHHHhCCCCceE---EEEcCchHHHHHcCCceecc-------c------------------c----C--Cc
Confidence 999999999998 566 88 99999999999999964310 0 0 0 01
Q ss_pred ccccCeEEEEeCCeEEEEEecCCCCC--CCCHHHHHHHh
Q 024977 217 VLQQGGMFVFKGKQLLYARKDEGTGD--HASLDDVFDIC 253 (259)
Q Consensus 217 ~~~~gg~fVid~g~V~y~~~~~~~~d--~~~~~~iL~a~ 253 (259)
....|++||||+|+|+|.|+.+++++ +++.+++|+.+
T Consensus 146 ~~~~r~tfiIddG~I~~~~~~~~~g~~~~~~~~~vL~~L 184 (184)
T 3uma_A 146 IRSKRYSMLVEDGVVKALNIEESPGQATASGAAAMLELL 184 (184)
T ss_dssp EEECCEEEEEETTEEEEEEECSSTTCCSTTSHHHHHHHC
T ss_pred ccceeEEEEECCCEEEEEEEeCCCCCCcCCCHHHHHhhC
Confidence 34578999999999999999987654 89999999864
No 4
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=99.95 E-value=1.4e-27 Score=196.89 Aligned_cols=152 Identities=14% Similarity=0.128 Sum_probs=128.1
Q ss_pred CCCcccCCCCCCcEEe-cCCCCeEecccc-cccCCCcEEEEEEcCCCCHhhH-HHHHHHHHHHHHHhhCCcEEEE-EeCC
Q 024977 67 EFPANVGDLLGDFSIF-TAAGEPVLFKDL-WDQNEGVAVVALLRHFGCPCCW-ELASALKESKARFDSAGVKLIA-VGVG 142 (259)
Q Consensus 67 ~~~~~vG~~aPdf~l~-d~~G~~v~lsdl-~~~~~~~vvL~f~r~~~Cp~C~-~~l~~L~~~~~~~~~~gv~vv~-Vs~~ 142 (259)
...+.+|+++|+|++. +.+|+.++|+++ .|+ ++||+|||++|||.|+ .|++.|++.+++|+++|+++|+ ||.+
T Consensus 12 ~~~~~vG~~aPdf~l~~~~~g~~v~L~d~~~gk---~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~D 88 (173)
T 3mng_A 12 SAPIKVGDAIPAVEVFEGEPGNKVNLAELFKGK---KGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVN 88 (173)
T ss_dssp -CCCCTTCBCCCCEEECSSTTCEEEHHHHTTTS---EEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESS
T ss_pred CCCCCCCCCCCCeEeeeCCCCCEEEhHHHhCCC---cEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcCC
Confidence 4567899999999999 999999999995 765 8999999999999999 5999999999999999999997 9999
Q ss_pred ChHHHHHHHh--hCC--CCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCcc
Q 024977 143 TPNKAQILAE--RLP--FPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSVL 218 (259)
Q Consensus 143 ~~~~~~~f~~--~~~--fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~ 218 (259)
+++.+++|++ +++ || +++|++++++++||+..... . ... + ++..
T Consensus 89 ~~~~~~~f~~~~~~~~~fp---~l~D~~~~va~~yGv~~~~~-----~------------~~~-----~-------g~~~ 136 (173)
T 3mng_A 89 DAFVTGEWGRAHKAEGKVR---LLADPTGAFGKETDLLLDDS-----L------------VSI-----F-------GNRR 136 (173)
T ss_dssp CHHHHHHHHHHTTCTTTCE---EEECTTCHHHHHHTCBCCST-----T------------HHH-----H-------SSCC
T ss_pred CHHHHHHHHHHhCCCCceE---EEECCChHHHHHhCCCcccc-----c------------ccc-----c-------CCcc
Confidence 9999999998 455 88 99999999999999964210 0 000 0 1235
Q ss_pred ccCeEEEEeCCeEEEEEecCCC--CCCCCHHHHHHHh
Q 024977 219 QQGGMFVFKGKQLLYARKDEGT--GDHASLDDVFDIC 253 (259)
Q Consensus 219 ~~gg~fVid~g~V~y~~~~~~~--~d~~~~~~iL~a~ 253 (259)
..|++||||+|+|+|.|+.++. .+..+.++||++|
T Consensus 137 ~~r~tfvIDdG~I~~~~v~~~~~g~~~~~~~~vl~~l 173 (173)
T 3mng_A 137 LKRFSMVVQDGIVKALNVEPDGTGLTCSLAPNIISQL 173 (173)
T ss_dssp BCCEEEEEETTEEEEEEECTTSSCSSTTSHHHHHHHC
T ss_pred eEEEEEEEECCEEEEEEEeCCCCCcchHHHHHHHHhC
Confidence 6899999998899999999886 4678888888764
No 5
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=99.95 E-value=4.9e-27 Score=199.70 Aligned_cols=145 Identities=12% Similarity=0.135 Sum_probs=127.5
Q ss_pred CCcccCCCCCCcEEe---cCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCCh
Q 024977 68 FPANVGDLLGDFSIF---TAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTP 144 (259)
Q Consensus 68 ~~~~vG~~aPdf~l~---d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~ 144 (259)
..+++|++||||+++ |.+|+.++|+|++|+ ++||+||+..|||.|..|++.|++.+++|++.|++|++||.|+.
T Consensus 21 M~~~VG~~APdF~l~a~~d~~~~~vsLsd~~GK---~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g~~vigiS~Ds~ 97 (216)
T 3sbc_A 21 MVAQVQKQAPTFKKTAVVDGVFDEVSLDKYKGK---YVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTDSE 97 (216)
T ss_dssp -CCCTTSBCCCCCEEEEETTEEEEECGGGGTTS---EEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCH
T ss_pred chhhcCCcCCCCCCcceECCCCcEEehHHhCCC---eEEEEEEcCCCCCcCchhhhHHHHhHHhhccCCceEEEeecCch
Confidence 457899999999976 667799999999997 89999999999999999999999999999999999999999999
Q ss_pred HHHHHHHh---------hCCCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCC
Q 024977 145 NKAQILAE---------RLPFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRS 215 (259)
Q Consensus 145 ~~~~~f~~---------~~~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~ 215 (259)
+.+++|++ .++|| |++|++++++++||+....
T Consensus 98 ~sh~aw~~~~~~~~~~~~l~fp---llsD~~~~vak~YGv~~~~------------------------------------ 138 (216)
T 3sbc_A 98 YSLLAWTNIPRKEGGLGPINIP---LLADTNHSLSRDYGVLIEE------------------------------------ 138 (216)
T ss_dssp HHHHHHHTSCGGGTCCCSCSSC---EEECTTSHHHHHHTCEETT------------------------------------
T ss_pred hhHHHHHHHHHHhCCccCcccc---eEeCCCCHHHHHcCCeecc------------------------------------
Confidence 99999986 26889 9999999999999995310
Q ss_pred CccccCeEEEEe-CCeEEEEEecCCCCCCCCHHHHHHHhcc
Q 024977 216 SVLQQGGMFVFK-GKQLLYARKDEGTGDHASLDDVFDICCK 255 (259)
Q Consensus 216 ~~~~~gg~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~~~ 255 (259)
.++..+|+|||| +|+|+|.++..... ..+++|+|+++.+
T Consensus 139 ~g~~~R~tFiID~~G~Ir~~~v~~~~~-grn~dEiLr~l~A 178 (216)
T 3sbc_A 139 EGVALRGLFIIDPKGVIRHITINDLPV-GRNVDEALRLVEA 178 (216)
T ss_dssp TTEECEEEEEECTTSBEEEEEEECTTB-CCCHHHHHHHHHH
T ss_pred CCceeeEEEEECCCCeEEEEEEcCCCC-CCCHHHHHHHHHH
Confidence 135678999999 89999999877654 5599999998864
No 6
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=99.94 E-value=4.7e-27 Score=200.17 Aligned_cols=147 Identities=12% Similarity=0.145 Sum_probs=127.0
Q ss_pred CCCCcccCCCCCCcE----EecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeC
Q 024977 66 TEFPANVGDLLGDFS----IFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGV 141 (259)
Q Consensus 66 ~~~~~~vG~~aPdf~----l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~ 141 (259)
+....++|++||||+ +.|.+|+.|+|+|++|+ ++||+||+..|||.|..|+..|++.+++|++.|++|++||.
T Consensus 22 ~~~~~~vG~~APdF~~~a~l~d~~g~~vsLsd~~GK---~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g~~vigiS~ 98 (219)
T 3tue_A 22 SCGNAKINSPAPSFEEVALMPNGSFKKISLSSYKGK---WVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELNCEVLACSI 98 (219)
T ss_dssp --CCCCTTSBCCCCEEEEECTTSCEEEEEGGGGTTS---EEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTTEEEEEEES
T ss_pred cccccccCCcCCCCcccccccCCCCcEEehHHhCCC---EEEEEEecccCCCCCchhHhhHHHHHhhhccCCcEEEEeeC
Confidence 344578999999999 45778999999999997 99999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHh---------hCCCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCC
Q 024977 142 GTPNKAQILAE---------RLPFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPD 212 (259)
Q Consensus 142 ~~~~~~~~f~~---------~~~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~ 212 (259)
|+.+..++|++ .++|| |++|++++++++||+....
T Consensus 99 Ds~~sh~~w~~~~~~~~~~~~l~fp---llsD~~~~va~~yGv~~~~--------------------------------- 142 (219)
T 3tue_A 99 DSEYAHLQWTLQDRKKGGLGTMAIP---ILADKTKNIARSYGVLEES--------------------------------- 142 (219)
T ss_dssp SCHHHHHHHHHSCGGGTCCCSCSSC---EEECTTSHHHHHTTCEETT---------------------------------
T ss_pred CchhhHHHHhhhhHHhcCccccccc---cccCcccHHHHHcCCcccC---------------------------------
Confidence 99999999986 26788 9999999999999995310
Q ss_pred CCCCccccCeEEEEe-CCeEEEEEecCCCCCCCCHHHHHHHhcc
Q 024977 213 DRSSVLQQGGMFVFK-GKQLLYARKDEGTGDHASLDDVFDICCK 255 (259)
Q Consensus 213 ~~~~~~~~gg~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~~~ 255 (259)
.++..+|+|||| +|+|+|.++..... ..+++|+|+++++
T Consensus 143 ---~g~~~R~tFiIDp~g~Ir~~~~~~~~~-gr~~~EvLr~l~a 182 (219)
T 3tue_A 143 ---QGVAYRGLFIIDPHGMLRQITVNDMPV-GRSVEEVLRLLEA 182 (219)
T ss_dssp ---TTEECEEEEEECTTSBEEEEEEECTTC-CCCHHHHHHHHHH
T ss_pred ---CCeeEEEEEEECCCCeEEEEEEecCCC-CCCHHHHHHHHHH
Confidence 135678999999 89999999766544 4499999998864
No 7
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=99.94 E-value=1.7e-26 Score=187.57 Aligned_cols=147 Identities=17% Similarity=0.211 Sum_probs=126.1
Q ss_pred CcccCCCCCCcEEe--cCCC--CeEeccc-ccccCCCcEEEEEEcCCCCHhhH-HHHHHHHHHHHHHhhCCcE-EEEEeC
Q 024977 69 PANVGDLLGDFSIF--TAAG--EPVLFKD-LWDQNEGVAVVALLRHFGCPCCW-ELASALKESKARFDSAGVK-LIAVGV 141 (259)
Q Consensus 69 ~~~vG~~aPdf~l~--d~~G--~~v~lsd-l~~~~~~~vvL~f~r~~~Cp~C~-~~l~~L~~~~~~~~~~gv~-vv~Vs~ 141 (259)
.+++|+.+|+|++. |.+| +.++|++ +.|+ ++||+||+++|||.|. .|++.|++++++|++.|++ |++||.
T Consensus 3 ~~~~G~~aP~f~l~~~~~~G~~~~~~l~~~~~gk---~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~ 79 (162)
T 1tp9_A 3 PIAVGDVLPDGKLAYFDEQDQLQEVSVHSLVAGK---KVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISV 79 (162)
T ss_dssp CCCTTCBCCCCEEEEECTTSCEEEEESHHHHTTS---EEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEES
T ss_pred cCCCCCCCCCeEEEeecCCCCceeEeHHHHhCCC---cEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEC
Confidence 46899999999986 8899 9999999 7775 8899999999999999 8999999999999999999 999999
Q ss_pred CChHHHHHHHhh--C--CCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCc
Q 024977 142 GTPNKAQILAER--L--PFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSV 217 (259)
Q Consensus 142 ~~~~~~~~f~~~--~--~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~ 217 (259)
++++.+++|.++ + +|| +++|++++++++||+..... + .+ . +.
T Consensus 80 d~~~~~~~~~~~~~~~~~~~---~l~D~~~~~~~~~gv~~~~~-----~------------------------~g-~-~~ 125 (162)
T 1tp9_A 80 NDPFVMKAWAKSYPENKHVK---FLADGSATYTHALGLELDLQ-----E------------------------KG-L-GT 125 (162)
T ss_dssp SCHHHHHHHHHTCTTCSSEE---EEECTTSHHHHHTTCEEEET-----T------------------------TT-S-EE
T ss_pred CCHHHHHHHHHhcCCCCCeE---EEECCCchHHHHcCcccccc-----c------------------------CC-C-Cc
Confidence 999999999984 5 577 99999999999999964210 0 00 0 13
Q ss_pred cccCeEEEEeCCeEEEEEecCCCCCCC--CHHHHHHHh
Q 024977 218 LQQGGMFVFKGKQLLYARKDEGTGDHA--SLDDVFDIC 253 (259)
Q Consensus 218 ~~~gg~fVid~g~V~y~~~~~~~~d~~--~~~~iL~a~ 253 (259)
...|.+||||+|+|+|.|++. +++++ +.++||+++
T Consensus 126 ~~~p~~~vid~G~i~~~~~~~-~~~~~~~~~~~vl~~l 162 (162)
T 1tp9_A 126 RSRRFALLVDDLKVKAANIEG-GGEFTVSSAEDILKDL 162 (162)
T ss_dssp EECCEEEEEETTEEEEEEECS-SSCCSSCSHHHHHTTC
T ss_pred cceeEEEEEECCEEEEEEeeC-CCCCccCCHHHHHhhC
Confidence 568899999988999999988 88887 899998764
No 8
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=99.94 E-value=2.4e-26 Score=186.91 Aligned_cols=145 Identities=13% Similarity=0.192 Sum_probs=129.9
Q ss_pred CCCCcccCCCCCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCChH
Q 024977 66 TEFPANVGDLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTPN 145 (259)
Q Consensus 66 ~~~~~~vG~~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~~ 145 (259)
....+++|+.+|+|++.|.+|+.++++++.|+ ++||+||++.|||.|..+++.|++++++ .|+++|+|+.++++
T Consensus 16 ~~~~l~~G~~aP~f~l~~~~G~~~~l~~~~Gk---~vvl~f~~~~~c~~C~~~~~~l~~~~~~---~~~~vv~is~d~~~ 89 (166)
T 3p7x_A 16 KGQQINEGDFAPDFTVLDNDLNQVTLADYAGK---KKLISVVPSIDTGVCDQQTRKFNSDASK---EEGIVLTISADLPF 89 (166)
T ss_dssp ESCCCCTTSBCCCCEEECTTSCEEEGGGGTTS---CEEEEECSCTTSHHHHHHHHHHHHHSCT---TTSEEEEEESSCHH
T ss_pred ecccCCCCCCCCCeEEEcCCCCEEeHHHhCCC---cEEEEEECCCCCCccHHHHHHHHHHhhc---CCCEEEEEECCCHH
Confidence 35678899999999999999999999999986 8999999899999999999999999876 89999999999999
Q ss_pred HHHHHHh--hC-CCCCCCcccCC-chHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCccccC
Q 024977 146 KAQILAE--RL-PFPMDCLYADP-DRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSVLQQG 221 (259)
Q Consensus 146 ~~~~f~~--~~-~fp~~~ll~D~-~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g 221 (259)
.+++|++ ++ +|| +++|+ +++++++||+.... .+...|
T Consensus 90 ~~~~~~~~~~~~~~~---~l~D~~~~~~~~~~gv~~~~------------------------------------~g~~~p 130 (166)
T 3p7x_A 90 AQKRWCASAGLDNVI---TLSDHRDLSFGENYGVVMEE------------------------------------LRLLAR 130 (166)
T ss_dssp HHHHHHHHHTCSSCE---EEECTTTCHHHHHHTCEETT------------------------------------TTEECC
T ss_pred HHHHHHHHcCCCceE---EccCCchhHHHHHhCCcccc------------------------------------CCceee
Confidence 9999988 56 788 99999 99999999985310 124578
Q ss_pred eEEEEe-CCeEEEEEecCCCCCCCCHHHHHHHhcc
Q 024977 222 GMFVFK-GKQLLYARKDEGTGDHASLDDVFDICCK 255 (259)
Q Consensus 222 g~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~~~ 255 (259)
.+|||| +|+|+|.|+..+..++++++++++++++
T Consensus 131 ~~~liD~~G~i~~~~~~~~~~~~~~~~~il~~l~~ 165 (166)
T 3p7x_A 131 AVFVLDADNKVVYKEIVSEGTDFPDFDAALAAYKN 165 (166)
T ss_dssp EEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHT
T ss_pred EEEEECCCCeEEEEEEcCCcccCCCHHHHHHHHhc
Confidence 999999 8999999999999999999999999875
No 9
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.94 E-value=9.2e-26 Score=182.96 Aligned_cols=146 Identities=16% Similarity=0.161 Sum_probs=128.1
Q ss_pred CCCCcccCCCCCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCChH
Q 024977 66 TEFPANVGDLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTPN 145 (259)
Q Consensus 66 ~~~~~~vG~~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~~ 145 (259)
....+.+|+.+|+|++.|.+|+.++++++.|+ ++||+||+++||+.|..+++.|+++++++ .|+++|+|+.++++
T Consensus 12 ~~~~~~~G~~~P~f~l~~~~G~~v~l~~~~gk---~vvl~F~~~~~c~~C~~~~~~l~~~~~~~--~~v~vv~is~d~~~ 86 (163)
T 1psq_A 12 TGKQLQVGDKALDFSLTTTDLSKKSLADFDGK---KKVLSVVPSIDTGICSTQTRRFNEELAGL--DNTVVLTVSMDLPF 86 (163)
T ss_dssp SSCCCCTTSBCCCCEEECTTSCEEEGGGGTTS---EEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESSCHH
T ss_pred ecCCCCCCCCCCCEEEEcCCCcEeeHHHhCCC---EEEEEEECCCCCCccHHHHHHHHHHHHHc--CCcEEEEEECCCHH
Confidence 34567899999999999999999999999886 77777776899999999999999999998 79999999999999
Q ss_pred HHHHHHh--hC-CCCCCCcccC-CchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCccccC
Q 024977 146 KAQILAE--RL-PFPMDCLYAD-PDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSVLQQG 221 (259)
Q Consensus 146 ~~~~f~~--~~-~fp~~~ll~D-~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g 221 (259)
.+++|.+ ++ +|| +++| ++++++++||+.... .++..|
T Consensus 87 ~~~~~~~~~~~~~~~---~l~D~~~~~~~~~~gv~~~~------------------------------------~g~~~p 127 (163)
T 1psq_A 87 AQKRWCGAEGLDNAI---MLSDYFDHSFGRDYALLINE------------------------------------WHLLAR 127 (163)
T ss_dssp HHHHHHHHHTCTTSE---EEECTTTCHHHHHHTCBCTT------------------------------------TCSBCC
T ss_pred HHHHHHHhcCCCCcE---EecCCchhHHHHHhCCcccc------------------------------------CCceEE
Confidence 9999988 56 788 8999 899999999985310 023468
Q ss_pred eEEEEe-CCeEEEEEecCCCCCCCCHHHHHHHhcc
Q 024977 222 GMFVFK-GKQLLYARKDEGTGDHASLDDVFDICCK 255 (259)
Q Consensus 222 g~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~~~ 255 (259)
.+|||| +|+|+|.|...+..++++++++++++++
T Consensus 128 ~~~liD~~G~i~~~~~g~~~~~~~~~~~~l~~l~~ 162 (163)
T 1psq_A 128 AVFVLDTDNTIRYVEYVDNINSEPNFEAAIAAAKA 162 (163)
T ss_dssp EEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHH
T ss_pred EEEEEcCCCeEEEEEecCCcCCCCCHHHHHHHHHh
Confidence 999999 8999999999999999999999999875
No 10
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=99.94 E-value=3e-26 Score=189.14 Aligned_cols=152 Identities=12% Similarity=0.141 Sum_probs=128.6
Q ss_pred CCCCcccCCC----CCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeC
Q 024977 66 TEFPANVGDL----LGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGV 141 (259)
Q Consensus 66 ~~~~~~vG~~----aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~ 141 (259)
...++++|+. +|+|++.|.+|+.++|+++.|+ ++||+||+++||+.|..+++.|++++++|++.|++||+|+.
T Consensus 17 ~~~~l~~Gd~ig~~aP~f~l~~~~G~~v~l~d~~Gk---~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~ 93 (179)
T 3ixr_A 17 RGSHMNIGDTLNHSLLNHPLMLSGSTCKTLSDYTNQ---WLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSR 93 (179)
T ss_dssp -CCSSCTTCBCCHHHHHCCEEEGGGEEECGGGGTTS---EEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEES
T ss_pred CCcccCcCcccCCcCCCeeEECCCCCEEeHHHHCCC---CEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcC
Confidence 4567888998 9999999999999999999986 89999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHh--hCCCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCccc
Q 024977 142 GTPNKAQILAE--RLPFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSVLQ 219 (259)
Q Consensus 142 ~~~~~~~~f~~--~~~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 219 (259)
++++.+++|++ +++|| +++|++++++++||+..... . .+. .....
T Consensus 94 D~~~~~~~~~~~~~~~f~---~l~D~~~~~~~~~gv~~~~~-----~------------------------~g~-~~~~~ 140 (179)
T 3ixr_A 94 DSVKSHDSFCAKQGFTFP---LVSDSDAILCKAFDVIKEKT-----M------------------------YGR-QVIGI 140 (179)
T ss_dssp CCHHHHHHHHHHHTCCSC---EEECTTCHHHHHTTCEEEEC-----C------------------------C---CEEEE
T ss_pred CCHHHHHHHHHHcCCceE---EEECCchHHHHHcCCccccc-----c------------------------cCc-ccCCc
Confidence 99999999988 57888 99999999999999964211 0 000 01234
Q ss_pred cCeEEEEe-CCeEEEEEecCCCCCCCCHHHHHHHhcc
Q 024977 220 QGGMFVFK-GKQLLYARKDEGTGDHASLDDVFDICCK 255 (259)
Q Consensus 220 ~gg~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~~~ 255 (259)
.|++|||| +|+|+|.|. +......+++|++.+++
T Consensus 141 ~p~~~lID~~G~I~~~~~--~~~~~~~~~~il~~l~~ 175 (179)
T 3ixr_A 141 ERSTFLIGPTHRIVEAWR--QVKVPGHAEEVLNKLKA 175 (179)
T ss_dssp CCEEEEECTTSBEEEEEC--SCCSTTHHHHHHHHHHH
T ss_pred ceEEEEECCCCEEEEEEc--CCCCCCCHHHHHHHHHH
Confidence 78999999 899999993 45567788999988864
No 11
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=99.93 E-value=1e-25 Score=192.67 Aligned_cols=146 Identities=14% Similarity=0.160 Sum_probs=127.7
Q ss_pred CCCCcccCCCCCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhH-----HHHHHHHHHHHHHhhCCcEEEEEe
Q 024977 66 TEFPANVGDLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCW-----ELASALKESKARFDSAGVKLIAVG 140 (259)
Q Consensus 66 ~~~~~~vG~~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~-----~~l~~L~~~~~~~~~~gv~vv~Vs 140 (259)
....+.+|+++|+|++.|.+|+.++|+++.|+ ++||+||+..|||.|. .+++.|++. | .|+.||+||
T Consensus 18 ~g~~l~vG~~APdFtL~d~~G~~vsLsd~~Gk---~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~--~gv~VvgIS 89 (224)
T 3keb_A 18 IGDFPRKGDYLPSFMLVDDQKHDAALESFSHT---PKLIVTLLSVDEDEHAGLLLLRETRRFLDS---W--PHLKLIVIT 89 (224)
T ss_dssp BSCCCCTTCBCCCCEEEETTSCEEEGGGGTTC---CEEEEECSCTTCSTTTSHHHHHHHHHHHTT---C--TTSEEEEEE
T ss_pred ecCcCCCCCCCCCeEEECCCCCEEeHHHhCCC---cEEEEEEeCCCCCCCCCCccHHHHHHHHHH---c--CCCEEEEEE
Confidence 35678899999999999999999999999886 8999999888899999 999999887 4 799999999
Q ss_pred CCChHHHHHHHh--hC-CCCCCCcccCC-chHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCC
Q 024977 141 VGTPNKAQILAE--RL-PFPMDCLYADP-DRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSS 216 (259)
Q Consensus 141 ~~~~~~~~~f~~--~~-~fp~~~ll~D~-~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~ 216 (259)
.++++.+++|++ ++ +|| +++|+ +++++++||+..... + + .
T Consensus 90 ~Ds~~~~~~f~~~~gl~~fp---lLsD~~~~~vak~yGv~~~~~-----~--------------------~--------~ 133 (224)
T 3keb_A 90 VDSPSSLARARHEHGLPNIA---LLSTLRGRDFHKRYGVLITEY-----P--------------------L--------S 133 (224)
T ss_dssp SSCHHHHHHHHHHHCCTTCE---EEESTTCTTHHHHTTCBCCST-----T--------------------S--------T
T ss_pred CCCHHHHHHHHHHcCCCCce---EEEcCCchHHHHHhCCccccc-----c--------------------c--------c
Confidence 999999999998 56 588 99999 699999999964210 0 0 1
Q ss_pred ccccCeEEEEe-CCeEEEEEecCCCCCCCCHHHHHHHhcc
Q 024977 217 VLQQGGMFVFK-GKQLLYARKDEGTGDHASLDDVFDICCK 255 (259)
Q Consensus 217 ~~~~gg~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~~~ 255 (259)
++..|++|||| +|+|+|.++..++.++|+++++++++++
T Consensus 134 G~~~p~tfvID~dG~I~~~~~~~~~~~~pd~~evl~~L~~ 173 (224)
T 3keb_A 134 GYTSPAIILADAANVVHYSERLANTRDFFDFDAIEKLLQE 173 (224)
T ss_dssp TCBCCEEEEECTTCBEEEEEECSBTTCCCCHHHHHHHHHH
T ss_pred CCccCEEEEEcCCCEEEEEEecCCCCCCCCHHHHHHHHHH
Confidence 35689999999 8999999999999999999999999864
No 12
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=99.93 E-value=3.2e-25 Score=181.58 Aligned_cols=149 Identities=13% Similarity=0.144 Sum_probs=126.1
Q ss_pred CcccCCCCCCcEEe-cCCCCeEecccc-cccCCCcEEEEEEcCCCCHhhHH-HHHHHHHHHHHHhhCCc-EEEEEeCCCh
Q 024977 69 PANVGDLLGDFSIF-TAAGEPVLFKDL-WDQNEGVAVVALLRHFGCPCCWE-LASALKESKARFDSAGV-KLIAVGVGTP 144 (259)
Q Consensus 69 ~~~vG~~aPdf~l~-d~~G~~v~lsdl-~~~~~~~vvL~f~r~~~Cp~C~~-~l~~L~~~~~~~~~~gv-~vv~Vs~~~~ 144 (259)
++++|+.+|+|++. |.+|+.++|+++ .|+ ++||+|||++|||.|+. |++.|++++++|++.|+ +||+||.+++
T Consensus 2 ~l~~G~~aP~f~l~~~~~G~~v~L~d~~~Gk---~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~ 78 (167)
T 2wfc_A 2 PIKEGDKLPAVTVFGATPNDKVNMAELFAGK---KGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVNDS 78 (167)
T ss_dssp CCCTTCBCCCCEEESSSTTCEEEHHHHTTTS---EEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESSCH
T ss_pred CCCCCCcCCCcEeecCCCCcEEeHHHHhCCC---cEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCH
Confidence 46799999999999 999999999999 775 89999999999999999 99999999999999999 9999999999
Q ss_pred HHHHHHHh--hCC--CCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCcccc
Q 024977 145 NKAQILAE--RLP--FPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSVLQQ 220 (259)
Q Consensus 145 ~~~~~f~~--~~~--fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 220 (259)
+.+++|++ +++ || +++|++++++++||+.... + .+ . + .....
T Consensus 79 ~~~~~~~~~~~~~~~fp---~l~D~~~~~~~~~gv~~~~------~----------~~----~--------g---~~~~~ 124 (167)
T 2wfc_A 79 FVMDAWGKAHGADDKVQ---MLADPGGAFTKAVDMELDL------S----------AV----L--------G---NVRSK 124 (167)
T ss_dssp HHHHHHHHHTTCTTTSE---EEECTTSHHHHHTTCEECC------H----------HH----H--------S---SCEEC
T ss_pred HHHHHHHHhcCCCcceE---EEECCCCcHHHHcCCcccc------c----------cc----c--------C---cccce
Confidence 99999998 456 77 9999999999999986421 0 00 0 0 13456
Q ss_pred CeEEEEeCCeEEEEEecCCCC--CCCCHHHHHHHhc
Q 024977 221 GGMFVFKGKQLLYARKDEGTG--DHASLDDVFDICC 254 (259)
Q Consensus 221 gg~fVid~g~V~y~~~~~~~~--d~~~~~~iL~a~~ 254 (259)
|.+|||++|+|+|.++..+.. +-...+.+|+.+.
T Consensus 125 p~t~lI~~G~I~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (167)
T 2wfc_A 125 RYSLVIEDGVVTKVNVEPDGKGLTCSLAPNILSQLG 160 (167)
T ss_dssp CEEEEEETTEEEEEEECTTSSSSSTTSHHHHHHHHC
T ss_pred EEEEEEeCCEEEEEEecCCCCcceeccHHHHHHHhc
Confidence 899999889999999988764 4567777777664
No 13
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=99.93 E-value=7.8e-26 Score=190.29 Aligned_cols=148 Identities=11% Similarity=0.174 Sum_probs=130.3
Q ss_pred CCCCcccCCCCCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCChH
Q 024977 66 TEFPANVGDLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTPN 145 (259)
Q Consensus 66 ~~~~~~vG~~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~~ 145 (259)
....+++|+.+|+|++.|.+|+.++|+++.|+ ++||+||++.||+.|..+++.|+++++++ .|+++|+|+.++++
T Consensus 48 ~~~~l~~G~~aPdf~l~d~~G~~v~L~d~~Gk---~vvl~F~~~~~c~~C~~e~~~l~~l~~~~--~~v~vv~Is~D~~~ 122 (200)
T 3zrd_A 48 AGKLPQIGDKAKDFTLVAKDLSDVALSSFAGK---RKVLNIFPSIDTGVCAASVRKFNQLAGEL--ENTVVLCISSDLPF 122 (200)
T ss_dssp ESCCCCTTCBCCCCEEECTTSCEEEGGGGTTS---EEEEEECSCCCCSCCCHHHHHHHHHHHTS--TTEEEEEEESSCHH
T ss_pred ecccCCCCCCCCCeEEECCCCCEEcHHHhCCC---cEEEEEECCCCCchhHHHHHHHHHHHHHh--CCCEEEEEECCCHH
Confidence 35678899999999999999999999999986 88888888999999999999999999999 79999999999999
Q ss_pred HHHHHHh--hC-CCCCCCcccCC-chHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCccccC
Q 024977 146 KAQILAE--RL-PFPMDCLYADP-DRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSVLQQG 221 (259)
Q Consensus 146 ~~~~f~~--~~-~fp~~~ll~D~-~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g 221 (259)
.+++|++ ++ +|| +++|+ +++++++||+..... + . .+...|
T Consensus 123 ~~~~~~~~~~~~~f~---~l~D~~~~~~~~~ygv~~~~~-----~--------------------~--------~g~~~p 166 (200)
T 3zrd_A 123 AQSRFCGAEGLSNVI---TLSTLRGADFKQAYGVAITEG-----P--------------------L--------AGLTAR 166 (200)
T ss_dssp HHTTCTTTTTCTTEE---EEETTSCTHHHHHTTCEECSS-----T--------------------T--------TTSBCC
T ss_pred HHHHHHHHcCCCCce---EEecCchHHHHHHhCceeecc-----c--------------------C--------CCcccc
Confidence 9999988 46 777 99999 999999999964210 0 0 123678
Q ss_pred eEEEEe-CCeEEEEEecCCCCCCCCHHHHHHHhc
Q 024977 222 GMFVFK-GKQLLYARKDEGTGDHASLDDVFDICC 254 (259)
Q Consensus 222 g~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~~ 254 (259)
.+|||| +|+|+|.++..+..+.++++++|++++
T Consensus 167 ~~~lID~~G~I~~~~~~~~~~~~~~~~~~l~~Lk 200 (200)
T 3zrd_A 167 AVVVLDGQDNVIYSELVNEITTEPNYDAALAALK 200 (200)
T ss_dssp EEEEECTTSBEEEEEECSBTTSCCCHHHHHHHHC
T ss_pred EEEEECCCCeEEEEEecCCcccCCCHHHHHHhhC
Confidence 999999 899999999999999999999999874
No 14
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=99.93 E-value=1.2e-25 Score=182.85 Aligned_cols=147 Identities=12% Similarity=0.215 Sum_probs=127.0
Q ss_pred CCCcccCCCCCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCChHH
Q 024977 67 EFPANVGDLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTPNK 146 (259)
Q Consensus 67 ~~~~~vG~~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~~~ 146 (259)
...+++|+.+|+|++.|.+|+.++++++.|+ ++||+||+++|||.|..+++.|+++++++ .|+++|+|+.++++.
T Consensus 14 ~~~~~~G~~~P~f~l~~~~G~~v~l~~~~gk---~vvl~f~~~~~c~~C~~e~~~l~~~~~~~--~~v~vv~Is~d~~~~ 88 (165)
T 1q98_A 14 GHFPQVGEIVENFILVGNDLADVALNDFASK---RKVLNIFPSIDTGVCATSVRKFNQQAAKL--SNTIVLCISADLPFA 88 (165)
T ss_dssp SCCCCTTCBCCCCEEECTTSCEEEGGGGTTS---EEEEEECSCSCSSCCCHHHHHHHHHHHHS--TTEEEEEEESSCHHH
T ss_pred cccCCCCCCCCCeEEECCCCCEEehHHhCCC---eEEEEEECCCCCCccHHHHHHHHHHHHHc--CCCEEEEEeCCCHHH
Confidence 3457899999999999999999999999886 78888887999999999999999999999 799999999999998
Q ss_pred HHHHHh--hC-CCCCCCcccCC-chHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCccccCe
Q 024977 147 AQILAE--RL-PFPMDCLYADP-DRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSVLQQGG 222 (259)
Q Consensus 147 ~~~f~~--~~-~fp~~~ll~D~-~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gg 222 (259)
+++|.+ ++ +|| +++|+ +++++++||+..... + . .++..|.
T Consensus 89 ~~~~~~~~~~~~~~---~l~D~~~~~~~~~~gv~~~~~-----~---------------------------~-~g~~~p~ 132 (165)
T 1q98_A 89 QARFCGAEGIENAK---TVSTFRNHALHSQLGVDIQTG-----P---------------------------L-AGLTSRA 132 (165)
T ss_dssp HTTCTTTTTCTTEE---EEECTTCTHHHHHTTCEECSS-----T---------------------------T-TTSBCCE
T ss_pred HHHHHHHcCCCceE---EeeccccchHHHHhCceeccc-----c---------------------------c-CCcccee
Confidence 999988 45 577 89998 899999999853200 0 0 1246799
Q ss_pred EEEEe-CCeEEEEEecCCCCCCCCHHHHHHHhc
Q 024977 223 MFVFK-GKQLLYARKDEGTGDHASLDDVFDICC 254 (259)
Q Consensus 223 ~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~~ 254 (259)
+|||| +|+|+|.|...+..++++++++|++++
T Consensus 133 ~~liD~~G~i~~~~~~~~~~~~~~~~~~l~~l~ 165 (165)
T 1q98_A 133 VIVLDEQNNVLHSQLVEEIKEEPNYEAALAVLA 165 (165)
T ss_dssp EEEECTTSBEEEEEECSBTTSCCCHHHHHHTTC
T ss_pred EEEEcCCCEEEEEEeCCCCCCCCCHHHHHHhhC
Confidence 99999 899999999988999999999999874
No 15
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=99.93 E-value=2.5e-25 Score=183.63 Aligned_cols=152 Identities=16% Similarity=0.151 Sum_probs=125.6
Q ss_pred CCCcccCCCCCCcEEecCCC----------CeEecccc-cccCCCcEEEEEEcCCCCHhhHH-HHHHHHHHHHHHhhCCc
Q 024977 67 EFPANVGDLLGDFSIFTAAG----------EPVLFKDL-WDQNEGVAVVALLRHFGCPCCWE-LASALKESKARFDSAGV 134 (259)
Q Consensus 67 ~~~~~vG~~aPdf~l~d~~G----------~~v~lsdl-~~~~~~~vvL~f~r~~~Cp~C~~-~l~~L~~~~~~~~~~gv 134 (259)
..++++||++|++++...++ +.++|+|+ .|+ ++||+|||+.|||.|.. |++.|++.+++|+++|+
T Consensus 7 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~vsLsd~~~Gk---~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g~ 83 (176)
T 4f82_A 7 HHMIQVGDALPDAQLFEFIDDAREGCTLGPNACSVRDQVAGK---RVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAGI 83 (176)
T ss_dssp CCCCCTTCBCCCCEEEEEECSCCTTCCSEEEEEEHHHHHTTC---EEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTC
T ss_pred chhhhcCCcCCceEEEEecccccccccCCceEEeHHHHhCCC---eEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCC
Confidence 36789999999987665322 78999998 664 89999999999999999 99999999999999999
Q ss_pred -EEEEEeCCChHHHHHHHh--hCC--CCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccc
Q 024977 135 -KLIAVGVGTPNKAQILAE--RLP--FPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEA 209 (259)
Q Consensus 135 -~vv~Vs~~~~~~~~~f~~--~~~--fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~ 209 (259)
+|++||.++++.+++|++ +++ || +++|++++++++||+..... . .
T Consensus 84 d~VigIS~D~~~~~~~f~~~~~l~~~f~---lLsD~~~~va~ayGv~~~~~-----~--------------------~-- 133 (176)
T 4f82_A 84 DEIWCVSVNDAFVMGAWGRDLHTAGKVR---MMADGSAAFTHALGLTQDLS-----A--------------------R-- 133 (176)
T ss_dssp CEEEEEESSCHHHHHHHHHHTTCTTTSE---EEECTTCHHHHHHTCEEECG-----G--------------------G--
T ss_pred CEEEEEeCCCHHHHHHHHHHhCCCCCce---EEEcCchHHHHHhCCCcccc-----c--------------------c--
Confidence 999999999999999998 466 88 99999999999999964210 0 0
Q ss_pred cCCCCCCccccCeEEEEeCCeEEEEEecCCC-CCCCCHHHHHHHhcc
Q 024977 210 TPDDRSSVLQQGGMFVFKGKQLLYARKDEGT-GDHASLDDVFDICCK 255 (259)
Q Consensus 210 ~~~~~~~~~~~gg~fVid~g~V~y~~~~~~~-~d~~~~~~iL~a~~~ 255 (259)
| . +....+++|||++|+|+|.++.+.. .+..+.+++|+++++
T Consensus 134 --G-~-g~~s~R~tfII~dG~I~~~~~~~~~~~~~~~a~~vL~~Lk~ 176 (176)
T 4f82_A 134 --G-M-GIRSLRYAMVIDGGVVKTLAVEAPGKFEVSDAASVLATLTS 176 (176)
T ss_dssp --T-C-CEEECCEEEEEETTEEEEEEECCTTCCSSSSHHHHHHTCCC
T ss_pred --C-C-CcccccEEEEEcCCEEEEEEEcCCCCcchhhHHHHHHHhhC
Confidence 0 0 1235689999988999999998732 356789999998864
No 16
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=99.93 E-value=2.5e-25 Score=181.57 Aligned_cols=147 Identities=17% Similarity=0.247 Sum_probs=127.9
Q ss_pred CCCcccCCCCCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCChHH
Q 024977 67 EFPANVGDLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTPNK 146 (259)
Q Consensus 67 ~~~~~vG~~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~~~ 146 (259)
...+.+|+.+|+|++.|.+|+.++++++.|+ ++||+||+++|||.|..+++.|+++++++ .|+++|+|+.++++.
T Consensus 18 ~~~l~~g~~~P~f~l~~~~G~~~~l~~~~gk---~vvl~f~~~~~C~~C~~~~~~l~~~~~~~--~~v~vv~Is~d~~~~ 92 (171)
T 2yzh_A 18 GPELKVGDRAPEAVVVTKDLQEKIVGGAKDV---VQVIITVPSLDTPVCETETKKFNEIMAGM--EGVDVTVVSMDLPFA 92 (171)
T ss_dssp SCCCCTTSBCCCEEEEETTSCEEEESSCCSS---EEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESSCHHH
T ss_pred CCcCCCCCcCCceEEECCCCCEeeHHHhCCC---eEEEEEECCCCCCchHHHHHHHHHHHHHc--CCceEEEEeCCCHHH
Confidence 4567899999999999999999999999886 78888877999999999999999999998 799999999999999
Q ss_pred HHHHHh--hC-CCCCCCcccC-CchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCccccCe
Q 024977 147 AQILAE--RL-PFPMDCLYAD-PDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSVLQQGG 222 (259)
Q Consensus 147 ~~~f~~--~~-~fp~~~ll~D-~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gg 222 (259)
+++|.+ ++ +|| +++| +++++ ++||+..... .. .++..|.
T Consensus 93 ~~~~~~~~~~~~~~---~l~D~~~~~~-~~~gv~~~~~--------------------------------~~-~g~~~p~ 135 (171)
T 2yzh_A 93 QKRFCESFNIQNVT---VASDFRYRDM-EKYGVLIGEG--------------------------------AL-KGILARA 135 (171)
T ss_dssp HHHHHHHTTCCSSE---EEECTTTCGG-GGGTCBBCSS--------------------------------TT-TTSBCCE
T ss_pred HHHHHHHcCCCCeE---EeecCccCcH-HHhCCEeccc--------------------------------cc-CCceeeE
Confidence 999998 45 677 8999 88999 9999864210 00 1245789
Q ss_pred EEEEe-CCeEEEEEecCCCCCCCCHHHHHHHhcc
Q 024977 223 MFVFK-GKQLLYARKDEGTGDHASLDDVFDICCK 255 (259)
Q Consensus 223 ~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~~~ 255 (259)
+|||| +|+|+|.|...+..++++++++++++++
T Consensus 136 ~~liD~~G~i~~~~~~~~~~~~~~~~~ll~~l~~ 169 (171)
T 2yzh_A 136 VFIIDKEGKVAYVQLVPEITEEPNYDEVVNKVKE 169 (171)
T ss_dssp EEEECTTSBEEEEEECSBTTSCCCCHHHHHHHHH
T ss_pred EEEEcCCCeEEEEEeCCCcCCCCCHHHHHHHHHh
Confidence 99999 8999999999999999999999999875
No 17
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.93 E-value=2.6e-25 Score=179.48 Aligned_cols=149 Identities=14% Similarity=0.154 Sum_probs=125.3
Q ss_pred CcccCCCCCCcE--EecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCChHH
Q 024977 69 PANVGDLLGDFS--IFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTPNK 146 (259)
Q Consensus 69 ~~~vG~~aPdf~--l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~~~ 146 (259)
.+.+|+++|+|+ +.|.+|++++++++.|+ ++||+||+++|||.|..+++.|+++++++++.|+++|+|+.++++.
T Consensus 6 ~l~~G~~~P~f~~~l~~~~G~~~~l~~~~gk---~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~ 82 (163)
T 3gkn_A 6 DAVLELPAATFDLPLSLSGGTQTTLRAHAGH---WLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSVKS 82 (163)
T ss_dssp CCCCCCCGGGGGCCEECSTTCEECSGGGTTS---CEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCHHH
T ss_pred ccccCCcCCCccccccCCCCCEEEHHHhCCC---cEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHH
Confidence 478999999999 99999999999999986 7888888779999999999999999999999999999999999999
Q ss_pred HHHHHh--hCCCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCccccCeEE
Q 024977 147 AQILAE--RLPFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSVLQQGGMF 224 (259)
Q Consensus 147 ~~~f~~--~~~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gg~f 224 (259)
+++|++ +++|| +++|++++++++||+..... . .+. ......|.+|
T Consensus 83 ~~~~~~~~~~~~~---~~~d~~~~~~~~~~v~~~~~-----~------------------------~~~-~~~~~~p~~~ 129 (163)
T 3gkn_A 83 HDNFCAKQGFAFP---LVSDGDEALCRAFDVIKEKN-----M------------------------YGK-QVLGIERSTF 129 (163)
T ss_dssp HHHHHHHHCCSSC---EEECTTCHHHHHTTCEEEEE-----E------------------------TTE-EEEEECCEEE
T ss_pred HHHHHHHhCCCce---EEECCcHHHHHHhCCccccc-----c------------------------ccc-cccCcceEEE
Confidence 999988 57788 89999999999999964210 0 000 0112388999
Q ss_pred EEe-CCeEEEEEecCCCCCCCCHHHHHHHhcc
Q 024977 225 VFK-GKQLLYARKDEGTGDHASLDDVFDICCK 255 (259)
Q Consensus 225 Vid-~g~V~y~~~~~~~~d~~~~~~iL~a~~~ 255 (259)
||| +|+|+|.|. +......++++++.+++
T Consensus 130 lid~~G~i~~~~~--~~~~~~~~~~il~~l~~ 159 (163)
T 3gkn_A 130 LLSPEGQVVQAWR--KVKVAGHADAVLAALKA 159 (163)
T ss_dssp EECTTSCEEEEEC--SCCSTTHHHHHHHHHHH
T ss_pred EECCCCeEEEEEc--CCCcccCHHHHHHHHHH
Confidence 999 899999993 44455778999988865
No 18
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=99.93 E-value=2.3e-25 Score=185.10 Aligned_cols=150 Identities=7% Similarity=0.092 Sum_probs=126.3
Q ss_pred cccCCCCCCcEEec--C---------CC----CeEecccc-cccCCCcEEEEEEcCCCCHhhH-HHHHHHHHHHHHH-hh
Q 024977 70 ANVGDLLGDFSIFT--A---------AG----EPVLFKDL-WDQNEGVAVVALLRHFGCPCCW-ELASALKESKARF-DS 131 (259)
Q Consensus 70 ~~vG~~aPdf~l~d--~---------~G----~~v~lsdl-~~~~~~~vvL~f~r~~~Cp~C~-~~l~~L~~~~~~~-~~ 131 (259)
+++|+++|+|++.+ . +| +.++++++ .++ ++||+|||+.|||.|. .|++.|++.+++| ++
T Consensus 1 l~vGd~aPdf~l~~~~~~~~~~~~~~~G~~~~~~v~l~d~~~gk---~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~ 77 (182)
T 1xiy_A 1 MKENDLIPNVKVMIDVRNMNNISDTDGSPNDFTSIDTHELFNNK---KILLISLPGAFTPTCSTKMIPGYEEEYDYFIKE 77 (182)
T ss_dssp CCTTCBCCCCEEEEEHHHHTC--------CCEEEEEHHHHSTTC---EEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTT
T ss_pred CCCCCCCCCeEEEcccccccccccccCCCccceeEeHHHHhCCC---cEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHh
Confidence 46899999999998 4 67 79999995 664 8999999999999999 8999999999999 99
Q ss_pred CCcE-EEEEeCCChHHHHHHHh--hC-CCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcc
Q 024977 132 AGVK-LIAVGVGTPNKAQILAE--RL-PFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTI 207 (259)
Q Consensus 132 ~gv~-vv~Vs~~~~~~~~~f~~--~~-~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~ 207 (259)
.|++ |++||.++++.+++|++ ++ +|| +++|++++++++||+..... . .
T Consensus 78 ~g~~~V~gvS~D~~~~~~~~~~~~~~~~f~---lLsD~~~~~a~~yGv~~~~~-----~--------------------~ 129 (182)
T 1xiy_A 78 NNFDDIYCITNNDIYVLKSWFKSMDIKKIK---YISDGNSSFTDSMNMLVDKS-----N--------------------F 129 (182)
T ss_dssp SCCSEEEEEESSCHHHHHHHHHHTTCCSSE---EEECTTSHHHHHTTCEEECG-----G--------------------G
T ss_pred CCCcEEEEEeCCCHHHHHHHHHHcCCCCce---EEEeCchHHHHHhCCceecc-----c--------------------c
Confidence 9995 99999999999999998 45 578 99999999999999964210 0 0
Q ss_pred cccCCCCCCccccCeEEEEeCCeEEEEEecCCCCC--------CCCHHHHHHHhccC
Q 024977 208 EATPDDRSSVLQQGGMFVFKGKQLLYARKDEGTGD--------HASLDDVFDICCKV 256 (259)
Q Consensus 208 ~~~~~~~~~~~~~gg~fVid~g~V~y~~~~~~~~d--------~~~~~~iL~a~~~~ 256 (259)
| . +....+++||||+|+|+|.++..++.+ +.+++++|+++++.
T Consensus 130 ----G-~-g~~~~R~tfvIddG~V~~~~v~~~~~~~~~~~~~~~~~~~~vL~~L~~~ 180 (182)
T 1xiy_A 130 ----F-M-GMRPWRFVAIVENNILVKMFQEKDKQHNIQTDPYDISTVNNVKEFLKNN 180 (182)
T ss_dssp ----T-C-CEEECCEEEEEETTEEEEEEECSSCCTTCSSCCCSTTSHHHHHHHHHCC
T ss_pred ----C-C-CCceEEEEEEEcCCEEEEEEEeCCcccccccCcccCCCHHHHHHHHHhc
Confidence 0 0 124567899999999999999887765 79999999999864
No 19
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.93 E-value=6.1e-25 Score=177.61 Aligned_cols=142 Identities=21% Similarity=0.259 Sum_probs=123.2
Q ss_pred CcccCCCCCCcEEecCCCCeEecccccccCCCc-EEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCChHHH
Q 024977 69 PANVGDLLGDFSIFTAAGEPVLFKDLWDQNEGV-AVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTPNKA 147 (259)
Q Consensus 69 ~~~vG~~aPdf~l~d~~G~~v~lsdl~~~~~~~-vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~~~~ 147 (259)
++++|+++|+|++.|.+|+.++++++.|+ + +||.||+++|||+|+.+++.|+++++++++.|+++|+|+.++.+.+
T Consensus 1 ml~~G~~~P~f~l~~~~G~~~~l~~~~gk---~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~ 77 (161)
T 3drn_A 1 MVKVGDKAPLFEGIADNGEKISLSDYIGK---HNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDINSH 77 (161)
T ss_dssp -CCTTSBCCCCEEEETTSCEEEGGGTTTT---SEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCHHHH
T ss_pred CCCCCCcCCCeEeecCCCCEEEHHHhcCC---CCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHH
Confidence 46899999999999999999999999986 5 7777777999999999999999999999999999999999999999
Q ss_pred HHHHh--hCCCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCccccCeEEE
Q 024977 148 QILAE--RLPFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSVLQQGGMFV 225 (259)
Q Consensus 148 ~~f~~--~~~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gg~fV 225 (259)
++|.+ +++|| +++|.++++++.||+.. +....|.+||
T Consensus 78 ~~~~~~~~~~~~---~~~d~~~~~~~~~~v~~--------------------------------------~~~~~P~~~l 116 (161)
T 3drn_A 78 KRFKEKYKLPFI---LVSDPDKKIRELYGAKG--------------------------------------FILPARITFV 116 (161)
T ss_dssp HHHHHHTTCCSE---EEECTTSHHHHHTTCCC--------------------------------------SSSCCCEEEE
T ss_pred HHHHHHhCCCce---EEECCcHHHHHHcCCCC--------------------------------------cCcccceEEE
Confidence 99998 46677 99999999999999841 1355789999
Q ss_pred Ee-CCeEEEEEecCCCCCCCCHHHHHHHhcc
Q 024977 226 FK-GKQLLYARKDEGTGDHASLDDVFDICCK 255 (259)
Q Consensus 226 id-~g~V~y~~~~~~~~d~~~~~~iL~a~~~ 255 (259)
|| +|+|++.|... ......++++++.+++
T Consensus 117 id~~G~i~~~~~g~-~~~~~~~~~il~~l~~ 146 (161)
T 3drn_A 117 IDKKGIIRHIYNSQ-MNPANHVNEALKALKQ 146 (161)
T ss_dssp ECTTSBEEEEEECS-SCTTHHHHHHHHHHHH
T ss_pred ECCCCEEEEEEecC-CCCCcCHHHHHHHHHH
Confidence 99 89999999874 3345678888888754
No 20
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=99.93 E-value=6.3e-26 Score=186.66 Aligned_cols=151 Identities=10% Similarity=0.072 Sum_probs=124.6
Q ss_pred CCCcccCCCCCCcEEecCCC-CeEecccc-cccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcE-EEEEeCCC
Q 024977 67 EFPANVGDLLGDFSIFTAAG-EPVLFKDL-WDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVK-LIAVGVGT 143 (259)
Q Consensus 67 ~~~~~vG~~aPdf~l~d~~G-~~v~lsdl-~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~-vv~Vs~~~ 143 (259)
...+++|+++|+|++.+.++ +.++|+++ .++ ++||+|||+.|||.|..|++.|++.+++|++.|++ |++||.|+
T Consensus 11 ~~~~~vGd~aPdf~l~~~g~~~~v~L~d~~~gk---~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~gv~~VigIS~D~ 87 (171)
T 2xhf_A 11 GSPIKVGDIIPDVLVYEDVPSKSFPIHDVFRGR---KGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEGYHTIACIAVND 87 (171)
T ss_dssp CCCCCTTCBCCCCEEECSSTTCEEETHHHHTTS---EEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTTCCEEEEEESSC
T ss_pred CCcccCcCCCCCeEEecCCCCcEEEhHHHhCCC---eEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCCEEEEEeCCC
Confidence 34678999999999995332 89999996 664 89999999999999999999999999999999996 99999999
Q ss_pred hHHHHHHHh--hC--CCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCccc
Q 024977 144 PNKAQILAE--RL--PFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSVLQ 219 (259)
Q Consensus 144 ~~~~~~f~~--~~--~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 219 (259)
++.+++|++ ++ +|| +++|++++++++||+..... . .+ . +...
T Consensus 88 ~~~~~~w~~~~~~~~~f~---lLSD~~~~~a~ayGv~~~~~----------------~----~g---~--------g~~~ 133 (171)
T 2xhf_A 88 PFVMAAWGKTVDPEHKIR---MLADMHGEFTRALGTELDSS----------------K----ML---G--------NNRS 133 (171)
T ss_dssp HHHHHHHHHHHCTTCCSE---EEECTTSHHHHHHTCBCCCH----------------H----HH---S--------SCCB
T ss_pred HHHHHHHHHhcCCCCCeE---EEEeCCchHHHHhCCceecc----------------c----cC---C--------Ccce
Confidence 999999998 45 788 99999999999999964210 0 00 0 1345
Q ss_pred cCeEEEEeCCeEEEEEecCCCC--CCCCHHHHHHHhc
Q 024977 220 QGGMFVFKGKQLLYARKDEGTG--DHASLDDVFDICC 254 (259)
Q Consensus 220 ~gg~fVid~g~V~y~~~~~~~~--d~~~~~~iL~a~~ 254 (259)
.+++||||+|+|+|.++..+++ .+.+.++||++++
T Consensus 134 ~R~tfvIddG~V~~~~v~~~~~~~~~s~a~~vL~~~~ 170 (171)
T 2xhf_A 134 RRYAMLIDDNKIRSVSTEPDITGLACLLSIQRQKENK 170 (171)
T ss_dssp CCEEEEEETTEEEEEEETTSCSHHHHHHHHHHC----
T ss_pred EEEEEEEeCCEEEEEEEeCCCCcccCCCHHHHHHHhc
Confidence 6789999999999999998887 5667899988765
No 21
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=99.93 E-value=1.2e-24 Score=186.37 Aligned_cols=150 Identities=21% Similarity=0.350 Sum_probs=125.6
Q ss_pred CcccCCCCCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCChHHHH
Q 024977 69 PANVGDLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTPNKAQ 148 (259)
Q Consensus 69 ~~~vG~~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~~~~~ 148 (259)
.+.+|+.+|+|++.+.+| .++|+|+.|+ +++||+|||++|||.|..+++.|++++++|++.|++||+||.++.+.++
T Consensus 4 ~l~~G~~aP~F~l~~~~G-~v~l~d~~Gk--~~vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS~D~~~~~~ 80 (224)
T 1prx_A 4 GLLLGDVAPNFEANTTVG-RIRFHDFLGD--SWGILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSIDSVEDHL 80 (224)
T ss_dssp -CCTTCBCCCCEEEETTE-EEEHHHHHTT--SEEEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHH
T ss_pred cCCCcCCCCCcEEecCCC-CEEHHHHcCC--CeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHH
Confidence 467999999999999999 9999999986 3799999999999999999999999999999999999999999998888
Q ss_pred HHHh------------hCCCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCC
Q 024977 149 ILAE------------RLPFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSS 216 (259)
Q Consensus 149 ~f~~------------~~~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~ 216 (259)
+|.+ +++|| +++|++++++++||+..... .+..++
T Consensus 81 ~~~~~i~~~~~~~~~~~~~fp---il~D~~~~va~~ygv~~~~~------------------------------~~~~g~ 127 (224)
T 1prx_A 81 AWSKDINAYNSEEPTEKLPFP---IIDDRNRELAILLGMLDPAE------------------------------KDEKGM 127 (224)
T ss_dssp HHHHHHHHHTTSCCCSCCSSC---EEECTTCHHHHHTTSSCSCT------------------------------TCSSSC
T ss_pred HHHHHHHHhhCcccccCcCcc---eeecCchHHHHHhCCCCccc------------------------------ccCCCc
Confidence 8876 35677 99999999999999864210 001112
Q ss_pred ccccCeEEEEe-CCeEEEEEecCCCCCCCCHHHHHHHhcc
Q 024977 217 VLQQGGMFVFK-GKQLLYARKDEGTGDHASLDDVFDICCK 255 (259)
Q Consensus 217 ~~~~gg~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~~~ 255 (259)
....|++|||| +|+|++.+.......+ ++++|++.+.+
T Consensus 128 ~~~~p~~fiID~~G~I~~~~~~~~~~gr-~~~eil~~i~~ 166 (224)
T 1prx_A 128 PVTARVVFVFGPDKKLKLSILYPATTGR-NFDEILRVVIS 166 (224)
T ss_dssp CTTCCEEEEECTTSBEEEEEECCTTBCC-CHHHHHHHHHH
T ss_pred cccceEEEEECCCCEEEEEEecCCCCCC-CHHHHHHHHHH
Confidence 45689999999 8999999987655444 78999888754
No 22
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=99.92 E-value=6.2e-25 Score=189.33 Aligned_cols=149 Identities=18% Similarity=0.264 Sum_probs=125.5
Q ss_pred cccCCCCCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCChHHHHH
Q 024977 70 ANVGDLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTPNKAQI 149 (259)
Q Consensus 70 ~~vG~~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~~~~~~ 149 (259)
+.+|+.+|+|++.+.+| .++|+++.|+ +++||+||+++|||.|..|++.|++++++|++.|++||+||.++.+.+++
T Consensus 3 l~iG~~aPdF~l~~~~G-~v~l~d~~Gk--~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS~D~~~~~~~ 79 (233)
T 2v2g_A 3 ITLGEVFPNFEADSTIG-KLKFHDWLGN--SWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSCDNVADHKE 79 (233)
T ss_dssp CCTTCBCCCCEEEETTC-CEEHHHHHCS--SEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHH
T ss_pred CCCCCCCCCcEEecCCC-CEEHHHHCCC--CeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHH
Confidence 67999999999999999 8999999986 37888888899999999999999999999999999999999999998899
Q ss_pred HHh----------hCCCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCccc
Q 024977 150 LAE----------RLPFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSVLQ 219 (259)
Q Consensus 150 f~~----------~~~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 219 (259)
|.+ +++|| +++|++++++++||+..... . ...++...
T Consensus 80 ~~~~i~~~~~~~~~~~fp---il~D~~~~va~~ygv~~~~~--------------------------~----~~~g~~~~ 126 (233)
T 2v2g_A 80 WSEDVKCLSGVKGDMPYP---IIADETRELAVKLGMVDPDE--------------------------R----TSTGMPLT 126 (233)
T ss_dssp HHHHHHHHHTCCSSCSSC---EEECTTCHHHHHTTCEEEEE--------------------------E----CTTCCEEE
T ss_pred HHHHHHHhhCcccCCceE---EEECChHHHHHHhCCcCccc--------------------------c----cCCCcccc
Confidence 987 45788 99999999999999964210 0 00112456
Q ss_pred cCeEEEEe-CCeEEEEEecCCCCCCCCHHHHHHHhcc
Q 024977 220 QGGMFVFK-GKQLLYARKDEGTGDHASLDDVFDICCK 255 (259)
Q Consensus 220 ~gg~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~~~ 255 (259)
.|++|||| +|+|++.+.......+ +++||++++.+
T Consensus 127 ~p~~fiID~~G~I~~~~~~~~~~gr-~~~eilr~l~~ 162 (233)
T 2v2g_A 127 CRAVFIIGPDKKLKLSILYPATTGR-NFSEILRVIDS 162 (233)
T ss_dssp CEEEEEECTTSBEEEEEEECTTBCC-CHHHHHHHHHH
T ss_pred cceEEEECCCCEEEEEEecCCCCCC-CHHHHHHHHHH
Confidence 89999999 8999999987654433 79999988764
No 23
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=99.92 E-value=6.1e-25 Score=180.39 Aligned_cols=146 Identities=16% Similarity=0.200 Sum_probs=120.5
Q ss_pred ccCCCCCCcEEecC----CC-----CeEecccc-cccCCCcEEEEEEcCCCCHhhHHH-HHHHHHHHHHHhhCCcE-EEE
Q 024977 71 NVGDLLGDFSIFTA----AG-----EPVLFKDL-WDQNEGVAVVALLRHFGCPCCWEL-ASALKESKARFDSAGVK-LIA 138 (259)
Q Consensus 71 ~vG~~aPdf~l~d~----~G-----~~v~lsdl-~~~~~~~vvL~f~r~~~Cp~C~~~-l~~L~~~~~~~~~~gv~-vv~ 138 (259)
.+|+.+|+|++.+. +| +.++|+++ .|+ ++||+|||++|||+|+.| ++.|++.+++|+++|++ |++
T Consensus 8 ~~g~~aP~f~l~~~~~~~~G~~~~~~~v~l~~~~~gk---~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~ 84 (171)
T 2pwj_A 8 DILSAASNVSLQKARTWDEGVESKFSTTPVNDIFKDK---KVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVIC 84 (171)
T ss_dssp --CCCSSSBCCCSCEECCCSSCTTCCCEEHHHHHTTS---EEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEE
T ss_pred cccCcCCCeEEecccccccCCccCcceEEHHHHhCCC---CEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEE
Confidence 46779999999997 57 99999997 765 899999999999999999 99999999999999999 999
Q ss_pred EeCCChHHHHHHHhhC----CCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCC
Q 024977 139 VGVGTPNKAQILAERL----PFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDR 214 (259)
Q Consensus 139 Vs~~~~~~~~~f~~~~----~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~ 214 (259)
||.++++.+++|.++. +|| +++|++++++++||+..... + . + .
T Consensus 85 Is~d~~~~~~~~~~~~~~~~~fp---~l~D~~~~~~~~ygv~~~~~-----~--------------------~----~-~ 131 (171)
T 2pwj_A 85 VAINDPYTVNAWAEKIQAKDAIE---FYGDFDGSFHKSLELTTDLS-----A--------------------G----L-L 131 (171)
T ss_dssp EESSCHHHHHHHHHHTTCTTTSE---EEECTTCHHHHHHTCEEECT-----T--------------------T----T-C
T ss_pred EeCCCHHHHHHHHHHhCCCCceE---EEECCccHHHHHhCCccccc-----c--------------------c----c-C
Confidence 9999999999999843 577 99999999999999863210 0 0 0 0
Q ss_pred CCccccCeEEEEeCCeEEEEEecCCCCC--CCCHHHHHHHh
Q 024977 215 SSVLQQGGMFVFKGKQLLYARKDEGTGD--HASLDDVFDIC 253 (259)
Q Consensus 215 ~~~~~~gg~fVid~g~V~y~~~~~~~~d--~~~~~~iL~a~ 253 (259)
+....+.+|+|++|+|+|.|+..++++ +.+.++||+++
T Consensus 132 -g~~~~~~t~~I~~G~I~~~~~~~~~~~~~~~~~~~il~~l 171 (171)
T 2pwj_A 132 -GIRSERWSAYVVDGKVKALNVEESPSDVKVSGAETILGQI 171 (171)
T ss_dssp -CEEECCEEEEEETTEEEEEEECSSTTCCSSSSHHHHHHHC
T ss_pred -CcccceeEEEEECCEEEEEEeecCCCCCcccCHHHHHhcC
Confidence 112345677778999999999998874 67999999875
No 24
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.92 E-value=3.5e-24 Score=184.47 Aligned_cols=151 Identities=13% Similarity=0.116 Sum_probs=128.2
Q ss_pred CcccCCCCCCcEEecC-CCC--eEeccc-ccccCCCcEEEEEEcCCCCHhhH-HHHHHHHHHHHHHhhCCc-EEEEEeCC
Q 024977 69 PANVGDLLGDFSIFTA-AGE--PVLFKD-LWDQNEGVAVVALLRHFGCPCCW-ELASALKESKARFDSAGV-KLIAVGVG 142 (259)
Q Consensus 69 ~~~vG~~aPdf~l~d~-~G~--~v~lsd-l~~~~~~~vvL~f~r~~~Cp~C~-~~l~~L~~~~~~~~~~gv-~vv~Vs~~ 142 (259)
.+.+|+.+|+|++.+. +|+ .++|++ +.|+ ++||+|||++|||.|+ .|++.|++++++|++.|+ +|++||.+
T Consensus 2 ~~~~G~~aP~f~l~~~~~g~~~~v~l~~~~~gk---~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d 78 (241)
T 1nm3_A 2 SSMEGKKVPQVTFRTRQGDKWVDVTTSELFDNK---TVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVN 78 (241)
T ss_dssp -CCTTSBCCCCEEEEEETTEEEEEEHHHHHTTS---EEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESS
T ss_pred CccCCCCCCCeEEEcccCCCceeecHHHHhCCC---eEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcC
Confidence 4679999999999996 787 999999 7876 8999999999999999 999999999999999999 99999999
Q ss_pred ChHHHHHHHh--hCC-CCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCccc
Q 024977 143 TPNKAQILAE--RLP-FPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSVLQ 219 (259)
Q Consensus 143 ~~~~~~~f~~--~~~-fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 219 (259)
+++.+++|.+ +++ || +++|++++++++||+..... . . +. +...
T Consensus 79 ~~~~~~~~~~~~~~~~~~---~l~D~~~~~~~~~gv~~~~~-----~--------------------~-g~-----~~~~ 124 (241)
T 1nm3_A 79 DTFVMNAWKEDEKSENIS---FIPDGNGEFTEGMGMLVGKE-----D--------------------L-GF-----GKRS 124 (241)
T ss_dssp CHHHHHHHHHHTTCTTSE---EEECTTSHHHHHTTCEEECT-----T--------------------T-TC-----CEEE
T ss_pred CHHHHHHHHHhcCCCceE---EEECCCcHHHHHhCceeecc-----c--------------------c-cC-----cccc
Confidence 9999999998 454 88 99999999999999864210 0 0 00 0135
Q ss_pred cCeEEEEeCCeEEEEEecCCCCCC----CCHHHHHHHhccC
Q 024977 220 QGGMFVFKGKQLLYARKDEGTGDH----ASLDDVFDICCKV 256 (259)
Q Consensus 220 ~gg~fVid~g~V~y~~~~~~~~d~----~~~~~iL~a~~~~ 256 (259)
.|.+|||.+|+|+|.|...+..++ .+++++|+.+...
T Consensus 125 ~p~t~li~~G~i~~~~~~~~~~~~~~~~~~~~~il~~l~~~ 165 (241)
T 1nm3_A 125 WRYSMLVKNGVVEKMFIEPNEPGDPFKVSDADTMLKYLAPQ 165 (241)
T ss_dssp CCEEEEEETTEEEEEEECCSCSSCCCSSSSHHHHHHHHCTT
T ss_pred eeEEEEEECCEEEEEEEeccCCCccceecCHHHHHHHhhhh
Confidence 789999988999999999887766 7999999999864
No 25
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=99.92 E-value=1.7e-24 Score=184.99 Aligned_cols=149 Identities=15% Similarity=0.172 Sum_probs=124.6
Q ss_pred cccCCCCCCcEEecC--CCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCChHHH
Q 024977 70 ANVGDLLGDFSIFTA--AGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTPNKA 147 (259)
Q Consensus 70 ~~vG~~aPdf~l~d~--~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~~~~ 147 (259)
+.+|+.+|+|++.+. +| .++|+++.|+ +++||+|||++|||.|..|++.|++++++|++.|+++|+||.++.+.+
T Consensus 3 l~iG~~aP~F~l~~~~~~G-~v~l~d~~Gk--~~vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS~D~~~~~ 79 (220)
T 1xcc_A 3 YHLGATFPNFTAKASGIDG-DFELYKYIEN--SWAILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCNSKESH 79 (220)
T ss_dssp CCTTCBCCCCEECBTTCSS-CEEHHHHTTT--SEEEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHH
T ss_pred CCCCCCCCCcEeecccCCC-cEeHHHHcCC--CeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHH
Confidence 679999999999999 99 8999999985 379999999999999999999999999999999999999999999888
Q ss_pred HHHHh---------hCCCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCcc
Q 024977 148 QILAE---------RLPFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSVL 218 (259)
Q Consensus 148 ~~f~~---------~~~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~ 218 (259)
++|.+ +++|| +++|++++++++||+..... . ...+...
T Consensus 80 ~~~~~~i~~~~~~~~~~fp---il~D~~~~va~~ygv~~~~~--------------------------~----~~~g~~~ 126 (220)
T 1xcc_A 80 DKWIEDIKYYGKLNKWEIP---IVCDESRELANKLKIMDEQE--------------------------K----DITGLPL 126 (220)
T ss_dssp HHHHHHHHHHHTCSCCCCC---EEECTTSHHHHHHTCEEEEE--------------------------E----CTTSCEE
T ss_pred HHHHHHHHHHhcCCCCcce---eEECchhHHHHHhCCCCccc--------------------------c----cCCCCCc
Confidence 88876 46788 99999999999999964210 0 0011135
Q ss_pred ccCeEEEEe-CCeEEEEEecCCCCCCCCHHHHHHHhcc
Q 024977 219 QQGGMFVFK-GKQLLYARKDEGTGDHASLDDVFDICCK 255 (259)
Q Consensus 219 ~~gg~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~~~ 255 (259)
..|++|||| +|+|++.+....... .+.++|++++++
T Consensus 127 ~~p~~flID~~G~I~~~~~~~~~~g-~~~~ell~~i~~ 163 (220)
T 1xcc_A 127 TCRCLFFISPEKKIKATVLYPATTG-RNAHEILRVLKS 163 (220)
T ss_dssp ECEEEEEECTTSBEEEEEEECTTBC-CCHHHHHHHHHH
T ss_pred ccceEEEECCCCEEEEEEecCCCCC-CCHHHHHHHHHH
Confidence 689999999 899999998665433 388999888754
No 26
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.92 E-value=5.6e-24 Score=170.92 Aligned_cols=146 Identities=18% Similarity=0.283 Sum_probs=126.2
Q ss_pred CcccCCCCCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCChHHHH
Q 024977 69 PANVGDLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTPNKAQ 148 (259)
Q Consensus 69 ~~~vG~~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~~~~~ 148 (259)
++.+|+.+|+|++.|.+|+.++++++.|+ +++||.|||++||+.|..+++.|+++++++++.|+++++|+.++.+.++
T Consensus 8 ~~~~G~~~p~f~l~~~~G~~~~l~~~~gk--~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~ 85 (160)
T 1xvw_A 8 MLNVGATAPDFTLRDQNQQLVTLRGYRGA--KNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPPPTHK 85 (160)
T ss_dssp CCCTTSBCCCCEEECTTSCEEEGGGGTTT--CEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHH
T ss_pred CCCCCCCCCCeEeEcCCCCEEeHHHhcCC--CCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHH
Confidence 48899999999999999999999999885 3577777779999999999999999999998889999999999999999
Q ss_pred HHHh--hCCCCCCCcccCC--chHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCccccCeEE
Q 024977 149 ILAE--RLPFPMDCLYADP--DRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSVLQQGGMF 224 (259)
Q Consensus 149 ~f~~--~~~fp~~~ll~D~--~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gg~f 224 (259)
+|.+ +++|| +++|. ++++++.||+.... ..++.+.+|
T Consensus 86 ~~~~~~~~~~~---~~~d~~~~~~~~~~~~v~~~~------------------------------------~~~p~~~~~ 126 (160)
T 1xvw_A 86 IWATQSGFTFP---LLSDFWPHGAVSQAYGVFNEQ------------------------------------AGIANRGTF 126 (160)
T ss_dssp HHHHHHTCCSC---EEECTTTTTHHHHHTTCEETT------------------------------------TTEECSEEE
T ss_pred HHHHhcCCCce---EEecCCcChHHHHHcCCcccc------------------------------------CCCeeeeEE
Confidence 9988 57788 89995 89999999985310 124456999
Q ss_pred EEe-CCeEEEEEecCCCCCCCCHHHHHHHhccC
Q 024977 225 VFK-GKQLLYARKDEGTGDHASLDDVFDICCKV 256 (259)
Q Consensus 225 Vid-~g~V~y~~~~~~~~d~~~~~~iL~a~~~~ 256 (259)
||| +|+|++.+... ..+.++++++++++++.
T Consensus 127 lid~~G~i~~~~~g~-~~~~~~~~~l~~~l~~l 158 (160)
T 1xvw_A 127 VVDRSGIIRFAEMKQ-PGEVRDQRLWTDALAAL 158 (160)
T ss_dssp EECTTSBEEEEEECC-TTCCCCHHHHHHHHHHT
T ss_pred EECCCCeEEEEEecC-CCCCCCHHHHHHHHHHh
Confidence 999 89999999976 67788999999998764
No 27
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.91 E-value=6.6e-24 Score=176.18 Aligned_cols=142 Identities=11% Similarity=0.031 Sum_probs=119.9
Q ss_pred ccCCCCCCcEEecC-CC--CeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCChHHH
Q 024977 71 NVGDLLGDFSIFTA-AG--EPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTPNKA 147 (259)
Q Consensus 71 ~vG~~aPdf~l~d~-~G--~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~~~~ 147 (259)
.+|+.+|+|++.|. +| +.++|+++.|+ ++||+||+++|||.|+.+++.|++++++|++.|++||+|+.++.+.+
T Consensus 2 ~~G~~aP~f~l~~~~~G~~~~v~l~~~~Gk---~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~~~~~ 78 (186)
T 1n8j_A 2 LINTKIKPFKNQAFKNGEFIEVTEKDTEGR---WSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFTH 78 (186)
T ss_dssp CTTCBCCCCEEEEEETTEEEEEEHHHHTTS---EEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHH
T ss_pred CCCCcCCCcEeecccCCcceEEEHHHHCCC---eEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHH
Confidence 58999999999998 59 89999999885 77777777899999999999999999999999999999999999989
Q ss_pred HHHHhh------CCCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCccccC
Q 024977 148 QILAER------LPFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSVLQQG 221 (259)
Q Consensus 148 ~~f~~~------~~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g 221 (259)
++|++. ++|| +++|++++++++||+.... .++..|
T Consensus 79 ~~~~~~~~~~~~~~fp---~l~D~~~~~~~~ygv~~~~------------------------------------~g~~~p 119 (186)
T 1n8j_A 79 KAWHSSSETIAKIKYA---MIGDPTGALTRNFDNMRED------------------------------------EGLADR 119 (186)
T ss_dssp HHHHHHCTTGGGCCSE---EEECTTSHHHHHTTCEETT------------------------------------TTEECE
T ss_pred HHHHHHcCcccCCcee---EEECCchHHHHHhCCccCC------------------------------------CCceee
Confidence 999874 4667 8999999999999985310 014578
Q ss_pred eEEEEe-CCeEEEEEecCCCCCCCCHHHHHHHhcc
Q 024977 222 GMFVFK-GKQLLYARKDEGTGDHASLDDVFDICCK 255 (259)
Q Consensus 222 g~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~~~ 255 (259)
.+|||| +|+|+|.|......+ .+.++|++++++
T Consensus 120 ~~~lID~~G~i~~~~~~~~~~~-~~~~~l~~~l~~ 153 (186)
T 1n8j_A 120 ATFVVDPQGIIQAIEVTAEGIG-RDASDLLRKIKA 153 (186)
T ss_dssp EEEEECTTSBEEEEEEECTTBC-CCHHHHHHHHHH
T ss_pred EEEEECCCCeEEEEEecCCCCC-CCHHHHHHHHHH
Confidence 999999 899999998765322 368888877653
No 28
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.91 E-value=5.9e-24 Score=181.67 Aligned_cols=143 Identities=10% Similarity=0.072 Sum_probs=121.5
Q ss_pred CcccCCCCCCcEEecC--CC--CeEecccc-cccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCC
Q 024977 69 PANVGDLLGDFSIFTA--AG--EPVLFKDL-WDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGT 143 (259)
Q Consensus 69 ~~~vG~~aPdf~l~d~--~G--~~v~lsdl-~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~ 143 (259)
.+.+|+.+|+|++.|. +| +.++++++ .|+ ++||+||+++|||.|+.+++.|++++++|++.|++||+|+.++
T Consensus 24 ~l~~G~~aP~F~l~~~~~~G~~~~v~L~d~~~Gk---~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~ 100 (221)
T 2c0d_A 24 LSLVTKKAYNFTAQGLNKNNEIINVDLSSFIGQK---YCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDS 100 (221)
T ss_dssp --CTTSBCCCCEEEEECTTSCEEEEEGGGGTTTC---EEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSC
T ss_pred cCCCCCCCCCeEEeccccCCCccEEeHHHHcCCC---eEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 3689999999999998 89 99999999 875 7777777799999999999999999999999999999999999
Q ss_pred hHHHHHHHhhC---------CCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCC
Q 024977 144 PNKAQILAERL---------PFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDR 214 (259)
Q Consensus 144 ~~~~~~f~~~~---------~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~ 214 (259)
.+.+++|.+.. +|| +++|++++++++||+. ..
T Consensus 101 ~~~~~~~~~~~~~~~g~~~~~fp---~l~D~~~~~~~~ygv~-~~----------------------------------- 141 (221)
T 2c0d_A 101 VYSHLAWKNMPIEKGGIGNVEFT---LVSDINKDISKNYNVL-YD----------------------------------- 141 (221)
T ss_dssp HHHHHHHHHSCGGGTCCCSCSSE---EEECTTSHHHHHTTCE-ET-----------------------------------
T ss_pred HHHHHHHHHHhhhhcCccCCceE---EEECCchHHHHHcCCc-cc-----------------------------------
Confidence 99999998744 567 8999999999999985 20
Q ss_pred CCccccCeEEEEe-CCeEEEEEecCCCCCCCCHHHHHHHhcc
Q 024977 215 SSVLQQGGMFVFK-GKQLLYARKDEGTGDHASLDDVFDICCK 255 (259)
Q Consensus 215 ~~~~~~gg~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~~~ 255 (259)
.+...|.+|||| +|+|+|.+.... ...++.++|++.+++
T Consensus 142 -~g~~~P~~~lID~~G~I~~~~~g~~-~~~~~~~ell~~l~~ 181 (221)
T 2c0d_A 142 -NSFALRGLFIIDKNGCVRHQTVNDL-PIGRNVQEVLRTIDS 181 (221)
T ss_dssp -TTEECEEEEEECTTSBEEEEEEECT-TCCCCHHHHHHHHHH
T ss_pred -CCCccceEEEECCCCeEEEEEecCC-CCCCCHHHHHHHHHH
Confidence 013478999999 899999998765 345788999887754
No 29
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=99.91 E-value=7.1e-24 Score=184.91 Aligned_cols=147 Identities=14% Similarity=0.099 Sum_probs=125.0
Q ss_pred CCCCcccCCCCCCcEEec---CCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC
Q 024977 66 TEFPANVGDLLGDFSIFT---AAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG 142 (259)
Q Consensus 66 ~~~~~~vG~~aPdf~l~d---~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~ 142 (259)
....+.+|+++|+|++.+ .+|+.++|+++.|+ ++||+||+++|||.|..+++.|++++++|++.|++||+|+.+
T Consensus 58 ~~~~l~vG~~aPdF~l~~l~d~~G~~vsLsd~kGK---~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D 134 (254)
T 3tjj_A 58 HLSKAKISKPAPYWEGTAVIDGEFKELKLTDYRGK---YLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVD 134 (254)
T ss_dssp -CCCCCTTSBCCCCEEEEEETTEEEEEEGGGGTTS---EEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESS
T ss_pred cccccCCCCCCCCcEeeeecCCCCcEEeHHHHCCC---eEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCC
Confidence 456788999999999774 56889999999986 888888889999999999999999999999999999999999
Q ss_pred ChHHHHHHHhh---------CCCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCC
Q 024977 143 TPNKAQILAER---------LPFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDD 213 (259)
Q Consensus 143 ~~~~~~~f~~~---------~~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~ 213 (259)
+.+.+++|++. ++|| +++|++++++++||+....
T Consensus 135 ~~~~~~~~~~~~~~~~g~~~~~fp---~l~D~~~~va~~ygv~~~~---------------------------------- 177 (254)
T 3tjj_A 135 SQFTHLAWINTPRRQGGLGPIRIP---LLSDLTHQISKDYGVYLED---------------------------------- 177 (254)
T ss_dssp CHHHHHHHHTSCGGGTSCCSCSSC---EEECTTSHHHHHHTCEETT----------------------------------
T ss_pred CHHHHHHHHHHHHHhcCCcccccc---eeeCcHHHHHHHcCCcccc----------------------------------
Confidence 99999999873 5788 9999999999999985310
Q ss_pred CCCccccCeEEEEe-CCeEEEEEecCCCCCCCCHHHHHHHhcc
Q 024977 214 RSSVLQQGGMFVFK-GKQLLYARKDEGTGDHASLDDVFDICCK 255 (259)
Q Consensus 214 ~~~~~~~gg~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~~~ 255 (259)
.+...|++|||| +|+|+|.+...... ..+++++++.+.+
T Consensus 178 --~g~~~p~tflID~~G~I~~~~~~~~~~-~~~~~eil~~L~a 217 (254)
T 3tjj_A 178 --SGHTLRGLFIIDDKGILRQITLNDLPV-GRSVDETLRLVQA 217 (254)
T ss_dssp --TTEECEEEEEECTTSBEEEEEEECTTC-CCCHHHHHHHHHH
T ss_pred --CCCccceEEEECCCCeEEEEEecCCCC-CCCHHHHHHHHHh
Confidence 024578999999 89999999976544 4478888887753
No 30
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.91 E-value=1e-23 Score=178.76 Aligned_cols=147 Identities=14% Similarity=0.081 Sum_probs=120.6
Q ss_pred CCCCcccCCCCCCcEEecC---CCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC
Q 024977 66 TEFPANVGDLLGDFSIFTA---AGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG 142 (259)
Q Consensus 66 ~~~~~~vG~~aPdf~l~d~---~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~ 142 (259)
....+.+|+.+|+|++.+. +|+.++|+++.|+ ++||+||+++|||.|..+++.|++++++|++.|++||+|+.+
T Consensus 15 ~~~~~~~G~~aP~f~l~~~~~~~g~~v~l~d~~Gk---~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D 91 (211)
T 2pn8_A 15 TENLYFQSMPAPYWEGTAVIDGEFKELKLTDYRGK---YLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVD 91 (211)
T ss_dssp ----CCSSCBCCCCEEEEEETTEEEEEEGGGGTTS---EEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESS
T ss_pred ccccCCCCCcCCCeEeecccCCCCcEEEHHHhCCC---eEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECC
Confidence 3456789999999999974 5689999999886 777777779999999999999999999999999999999999
Q ss_pred ChHHHHHHHhh---------CCCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCC
Q 024977 143 TPNKAQILAER---------LPFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDD 213 (259)
Q Consensus 143 ~~~~~~~f~~~---------~~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~ 213 (259)
+.+.+++|++. ++|| +++|++++++++||+....
T Consensus 92 ~~~~~~~~~~~~~~~~g~~~~~fp---~l~D~~~~~~~~ygv~~~~---------------------------------- 134 (211)
T 2pn8_A 92 SQFTHLAWINTPRRQGGLGPIRIP---LLSDLTHQISKDYGVYLED---------------------------------- 134 (211)
T ss_dssp CHHHHHHHHTSCGGGTCCCSCSSC---EEECTTSHHHHHTTCEETT----------------------------------
T ss_pred CHHHHHHHHHHhhhccCccCCceE---EEECCchHHHHHcCCcccC----------------------------------
Confidence 99999999873 4677 8999999999999985310
Q ss_pred CCCccccCeEEEEe-CCeEEEEEecCCCCCCCCHHHHHHHhcc
Q 024977 214 RSSVLQQGGMFVFK-GKQLLYARKDEGTGDHASLDDVFDICCK 255 (259)
Q Consensus 214 ~~~~~~~gg~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~~~ 255 (259)
.+...|.+|||| +|+|+|.+....... .+.+++++.+++
T Consensus 135 --~g~~~p~~~lID~~G~I~~~~~g~~~~~-~~~~ell~~l~~ 174 (211)
T 2pn8_A 135 --SGHTLRGLFIIDDKGILRQITLNDLPVG-RSVDETLRLVQA 174 (211)
T ss_dssp --TTEECEEEEEECTTSBEEEEEEECTTBC-CCHHHHHHHHHH
T ss_pred --CCcccceEEEECCCCEEEEEEecCCCCC-CCHHHHHHHHHH
Confidence 023578999999 899999998754332 478888887754
No 31
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=99.91 E-value=1.3e-23 Score=181.61 Aligned_cols=147 Identities=12% Similarity=0.097 Sum_probs=123.8
Q ss_pred CCCCcccCCCCCCcEEec---CCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC
Q 024977 66 TEFPANVGDLLGDFSIFT---AAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG 142 (259)
Q Consensus 66 ~~~~~~vG~~aPdf~l~d---~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~ 142 (259)
....+.+|+++|+|++.+ .+|+.++|+++.|+ ++||+||+++|||+|..+++.|++++++|++.|++||+|+.+
T Consensus 44 ~~~~l~vG~~aPdF~l~~~~d~~G~~vsLsd~~Gk---~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D 120 (240)
T 3qpm_A 44 HLSKAKISKPAPQWEGTAVINGEFKELKLSDYRGK---YLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVD 120 (240)
T ss_dssp EECSCCTTSBCCCCEEEEEETTEEEEEEGGGGTTS---EEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESS
T ss_pred ccCcCCCCCCCCCcEeeeeeCCCCcEEEHHHhCCC---EEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECC
Confidence 345678999999999875 44679999999986 788888877999999999999999999999999999999999
Q ss_pred ChHHHHHHHhh---------CCCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCC
Q 024977 143 TPNKAQILAER---------LPFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDD 213 (259)
Q Consensus 143 ~~~~~~~f~~~---------~~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~ 213 (259)
+.+..++|.+. ++|| +++|++++++++||+....
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~fp---~l~D~~~~v~~~ygv~~~~---------------------------------- 163 (240)
T 3qpm_A 121 SQFTHLAWIITPRKQGGLGPMKIP---LLSDLTHQISKDYGVYLED---------------------------------- 163 (240)
T ss_dssp CHHHHHHHHHSCGGGTCCCSCSSC---EEECTTSHHHHHTTCEETT----------------------------------
T ss_pred CHHHHHHHHHHHHhhcCCCCCcee---EEeCchHHHHHHhCCcccc----------------------------------
Confidence 99999999873 5778 9999999999999985310
Q ss_pred CCCccccCeEEEEe-CCeEEEEEecCCCCCCCCHHHHHHHhcc
Q 024977 214 RSSVLQQGGMFVFK-GKQLLYARKDEGTGDHASLDDVFDICCK 255 (259)
Q Consensus 214 ~~~~~~~gg~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~~~ 255 (259)
.+...|++|||| +|+|+|.+...... ..+++++++.+++
T Consensus 164 --~g~~~p~~flID~~G~I~~~~~~~~~~-~~~~~eil~~l~~ 203 (240)
T 3qpm_A 164 --QGHTLRGLFIIDEKGVLRQITMNDLPV-GRSVDETLRLVQA 203 (240)
T ss_dssp --TTEECEEEEEECTTSBEEEEEEECTTB-CCCHHHHHHHHHH
T ss_pred --CCCccceEEEEcCCCeEEEEEecCCCC-CCCHHHHHHHHHH
Confidence 024578999999 89999999876544 4478888887754
No 32
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.90 E-value=1.1e-23 Score=169.62 Aligned_cols=131 Identities=19% Similarity=0.353 Sum_probs=111.7
Q ss_pred CCCcccCCCCCCcEEecCCCCeEecccccccCCC-cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCChH
Q 024977 67 EFPANVGDLLGDFSIFTAAGEPVLFKDLWDQNEG-VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTPN 145 (259)
Q Consensus 67 ~~~~~vG~~aPdf~l~d~~G~~v~lsdl~~~~~~-~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~~ 145 (259)
...+.+|+.+|+|++.|.+|+.++++++.|+ + ++||+||+++|||.|..+++.|+++++++++.| +||+|+.++++
T Consensus 4 ~~~~~~G~~~P~f~l~~~~G~~v~l~~~~gk--~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~-~vv~is~d~~~ 80 (159)
T 2a4v_A 4 VNELEIGDPIPDLSLLNEDNDSISLKKITEN--NRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA-AVFGLSADSVT 80 (159)
T ss_dssp TTCCCTTCBCCSCEEECTTSCEEEHHHHHHH--CSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC-EEEEEESCCHH
T ss_pred CCcCCCCCCCCCeEEECCCCCEEeHHHHhCC--CCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC-cEEEEeCCCHH
Confidence 4467899999999999999999999999985 3 366666789999999999999999999999999 99999999999
Q ss_pred HHHHHHh--hCCCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCccccCeE
Q 024977 146 KAQILAE--RLPFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSVLQQGGM 223 (259)
Q Consensus 146 ~~~~f~~--~~~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gg~ 223 (259)
.+++|.+ +++|| +++|++++++++||+... |. .+ ..+.+
T Consensus 81 ~~~~~~~~~~~~~~---~l~D~~~~~~~~~gv~~~-------p~---------------------------~g--~~~~~ 121 (159)
T 2a4v_A 81 SQKKFQSKQNLPYH---LLSDPKREFIGLLGAKKT-------PL---------------------------SG--SIRSH 121 (159)
T ss_dssp HHHHHHHHHTCSSE---EEECTTCHHHHHHTCBSS-------SS---------------------------SC--BCCEE
T ss_pred HHHHHHHHhCCCce---EEECCccHHHHHhCCccc-------cc---------------------------CC--ccceE
Confidence 9999988 57788 999999999999998531 10 01 36688
Q ss_pred EEEeCCeEEEEEecCC
Q 024977 224 FVFKGKQLLYARKDEG 239 (259)
Q Consensus 224 fVid~g~V~y~~~~~~ 239 (259)
|||.+|+|+|.|....
T Consensus 122 ~li~~G~i~~~~~g~~ 137 (159)
T 2a4v_A 122 FIFVDGKLKFKRVKIS 137 (159)
T ss_dssp EEEETTEEEEEEESCC
T ss_pred EEEcCCEEEEEEccCC
Confidence 9997789999998644
No 33
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.90 E-value=1.9e-23 Score=177.27 Aligned_cols=145 Identities=12% Similarity=0.087 Sum_probs=123.0
Q ss_pred CCCcccCCCCCCcEEecC--CC--CeEecccc-cccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeC
Q 024977 67 EFPANVGDLLGDFSIFTA--AG--EPVLFKDL-WDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGV 141 (259)
Q Consensus 67 ~~~~~vG~~aPdf~l~d~--~G--~~v~lsdl-~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~ 141 (259)
...+.+|+.+|+|++.+. +| +.++|+++ .|+ ++||+||+++|||.|..+++.|++++++|++.|+++|+|+.
T Consensus 18 ~~~l~~G~~aP~f~l~~~~~~G~~~~v~l~d~~~gk---~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~ 94 (213)
T 2i81_A 18 GSPTYVGKEAPFFKAEAVFGDNSFGEVNLTQFIGKK---YVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSV 94 (213)
T ss_dssp --CCCBTSBCCCCEEEEECTTSCEEEEEGGGGTTTC---EEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEES
T ss_pred CccccCCCcCCCeEeeccccCCceeEEeHHHHcCCC---eEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeC
Confidence 456789999999999998 89 89999999 775 77777777999999999999999999999999999999999
Q ss_pred CChHHHHHHHhh---------CCCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCC
Q 024977 142 GTPNKAQILAER---------LPFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPD 212 (259)
Q Consensus 142 ~~~~~~~~f~~~---------~~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~ 212 (259)
++++.+++|.+. ++|| +++|++++++++||+...
T Consensus 95 D~~~~~~~~~~~~~~~~g~~~~~fp---~l~D~~~~~~~~ygv~~~---------------------------------- 137 (213)
T 2i81_A 95 DSKYTHLAWKKTPLAKGGIGNIKHT---LLSDITKSISKDYNVLFD---------------------------------- 137 (213)
T ss_dssp SCHHHHHHHHSSCGGGTCCCSCSSE---EEECTTSHHHHHTTCEET----------------------------------
T ss_pred CCHHHHHHHHHHHHhhCCccCCCce---EEECCchHHHHHhCCccc----------------------------------
Confidence 999999999873 4677 899999999999998530
Q ss_pred CCCCccccCeEEEEe-CCeEEEEEecCCCCCCCCHHHHHHHhcc
Q 024977 213 DRSSVLQQGGMFVFK-GKQLLYARKDEGTGDHASLDDVFDICCK 255 (259)
Q Consensus 213 ~~~~~~~~gg~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~~~ 255 (259)
.+...|++|||| +|+|+|.+...... ..+.+++++++.+
T Consensus 138 ---~g~~~p~~~lID~~G~i~~~~~~~~~~-~~~~~ell~~l~~ 177 (213)
T 2i81_A 138 ---DSVSLRAFVLIDMNGIVQHLLVNNLAI-GRSVDEILRIIDA 177 (213)
T ss_dssp ---TTEECEEEEEECTTSBEEEEEEECTTC-CCCHHHHHHHHHH
T ss_pred ---cCCcccEEEEECCCCEEEEEEecCCCC-CCCHHHHHHHHHH
Confidence 024578999999 89999999876543 3588899887754
No 34
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.90 E-value=4.7e-23 Score=172.83 Aligned_cols=145 Identities=12% Similarity=0.142 Sum_probs=123.3
Q ss_pred CCcccCCCCCCcEEecC--CC--CeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCC
Q 024977 68 FPANVGDLLGDFSIFTA--AG--EPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGT 143 (259)
Q Consensus 68 ~~~~vG~~aPdf~l~d~--~G--~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~ 143 (259)
..+.+|+.+|+|++.+. +| +.++++++.|+ ++||+||+++|||.|..+++.|++++++|++.|+++|+|+.++
T Consensus 4 ~~~~~G~~aP~f~l~~~~~~g~~~~v~l~~~~gk---~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~ 80 (202)
T 1uul_A 4 GEAEDLHPAPDFNETALMPNGTFKKVALTSYKGK---WLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDS 80 (202)
T ss_dssp CCCCTTSBCCCCEEEEECTTSCEEEEEGGGGTTS---EEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSC
T ss_pred ccccCCCcCCCcEeeeeecCCCccEEEHHHhCCC---eEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 46789999999999997 78 89999999885 7777777799999999999999999999999999999999999
Q ss_pred hHHHHHHHhh---------CCCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCC
Q 024977 144 PNKAQILAER---------LPFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDR 214 (259)
Q Consensus 144 ~~~~~~f~~~---------~~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~ 214 (259)
.+.+++|.+. ++|| +++|+++++++.||+....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~p---~l~D~~~~~~~~ygv~~~~----------------------------------- 122 (202)
T 1uul_A 81 EYSHLAWTSIERKRGGLGQMNIP---ILADKTKCIMKSYGVLKEE----------------------------------- 122 (202)
T ss_dssp HHHHHHHHHSCGGGTCCCSCSSC---EEECTTCHHHHHHTCEETT-----------------------------------
T ss_pred HHHHHHHHHHHHhhCCCCCCcee---EEECCchHHHHHcCCccCC-----------------------------------
Confidence 9999999873 4677 9999999999999985310
Q ss_pred CCccccCeEEEEe-CCeEEEEEecCCCCCCCCHHHHHHHhcc
Q 024977 215 SSVLQQGGMFVFK-GKQLLYARKDEGTGDHASLDDVFDICCK 255 (259)
Q Consensus 215 ~~~~~~gg~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~~~ 255 (259)
.+...|.+|||| +|+|+|.+.+.... ..+.++|++++++
T Consensus 123 -~g~~~P~~~lid~~G~i~~~~~g~~~~-~~~~~ell~~l~~ 162 (202)
T 1uul_A 123 -DGVAYRGLFIIDPKQNLRQITVNDLPV-GRDVDEALRLVKA 162 (202)
T ss_dssp -TTEECEEEEEECTTSBEEEEEEECTTB-CCCHHHHHHHHHH
T ss_pred -CCceeeEEEEECCCCEEEEEEeCCCCC-CCCHHHHHHHHHH
Confidence 024678999999 89999999876533 4588898887754
No 35
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=99.90 E-value=3.9e-23 Score=179.64 Aligned_cols=144 Identities=21% Similarity=0.259 Sum_probs=123.4
Q ss_pred CcccCCCCCCcEEecCCCCeEec-ccc--cccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCChH
Q 024977 69 PANVGDLLGDFSIFTAAGEPVLF-KDL--WDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTPN 145 (259)
Q Consensus 69 ~~~vG~~aPdf~l~d~~G~~v~l-sdl--~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~~ 145 (259)
++.+|+.+|+|++.+.+| .++| +++ .|+ ++||+|||++|||.|..+++.|++++++|++.|++||+||.++.+
T Consensus 4 ~~~iG~~aPdF~l~~~~G-~v~l~~d~l~~GK---~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~Ds~~ 79 (249)
T 3a2v_A 4 IPLIGERFPEMEVTTDHG-VIKLPDHYVSQGK---WFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVF 79 (249)
T ss_dssp ECCTTSBCCCEEEEETTE-EEEETHHHHTTTC---EEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHH
T ss_pred cCCCCCCCCCeEEEcCCC-CEecHHHHhhCCC---EEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECCCHH
Confidence 567999999999999999 7999 999 665 789999999999999999999999999999999999999999998
Q ss_pred HHHHHHh--------hCCCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCc
Q 024977 146 KAQILAE--------RLPFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSV 217 (259)
Q Consensus 146 ~~~~f~~--------~~~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~ 217 (259)
.+.+|.+ +++|| +++|+++++++.||+.... .+.
T Consensus 80 ~~~~w~~~~~~~~~~~i~fP---il~D~~~~ia~~ygv~~~~-----------------------------------~g~ 121 (249)
T 3a2v_A 80 SHIKWKEWIERHIGVRIPFP---IIADPQGTVARRLGLLHAE-----------------------------------SAT 121 (249)
T ss_dssp HHHHHHHHHHHHTCCCCCSC---EEECTTSHHHHHHTCCCTT-----------------------------------CSS
T ss_pred HHHHHHHHHHHhcCCCCcee---EEECCchHHHHHhCCcccc-----------------------------------CCC
Confidence 8888876 47788 9999999999999985310 023
Q ss_pred cccCeEEEEe-CCeEEEEEecCCCCCCCCHHHHHHHhcc
Q 024977 218 LQQGGMFVFK-GKQLLYARKDEGTGDHASLDDVFDICCK 255 (259)
Q Consensus 218 ~~~gg~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~~~ 255 (259)
...|++|||| +|+|++.+....... .+++||++++.+
T Consensus 122 ~~~p~~fIID~dG~I~~~~~~~~~~g-r~~~Ellr~I~a 159 (249)
T 3a2v_A 122 HTVRGVFIVDARGVIRTMLYYPMELG-RLVDEILRIVKA 159 (249)
T ss_dssp SCCEEEEEECTTSBEEEEEEECTTBC-CCHHHHHHHHHH
T ss_pred cccceEEEECCCCeEEEEEecCCccc-chhHHHHHHHHH
Confidence 4688999999 899999998765432 478999888754
No 36
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.90 E-value=5.2e-23 Score=175.55 Aligned_cols=146 Identities=14% Similarity=0.153 Sum_probs=120.4
Q ss_pred CCCcccCCCCCCcEEecC---CCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCC
Q 024977 67 EFPANVGDLLGDFSIFTA---AGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGT 143 (259)
Q Consensus 67 ~~~~~vG~~aPdf~l~d~---~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~ 143 (259)
...+.+|+++|+|++.+. +|+.++|+++.|+ ++||.||.++||++|..+++.|++++++|++.|++||+|+.++
T Consensus 37 ~~~l~~G~~aP~f~l~~~~d~~G~~v~l~~~~Gk---~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~ 113 (222)
T 3ztl_A 37 TMVLLPNRPAPEFKGQAVINGEFKEICLKDYRGK---YVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDS 113 (222)
T ss_dssp ---CCSSEECCCCEEEEEETTEEEEEEGGGGTTS---EEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSC
T ss_pred cccccCCCCCCCeEEecccCCCCcEEeHHHhCCC---eEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 456889999999999954 5699999999875 6666665569999999999999999999999999999999999
Q ss_pred hHHHHHHHh---------hCCCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCC
Q 024977 144 PNKAQILAE---------RLPFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDR 214 (259)
Q Consensus 144 ~~~~~~f~~---------~~~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~ 214 (259)
.+..++|.+ .++|| +++|+++++++.||+....
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~---~l~D~~~~~~~~ygv~~~~----------------------------------- 155 (222)
T 3ztl_A 114 QYSHLAWDNLDRKSGGLGHMKIP---LLADRKQEISKAYGVFDEE----------------------------------- 155 (222)
T ss_dssp HHHHHHHHHSCGGGTSCCSCSSC---EEECSSSHHHHHTTCBCTT-----------------------------------
T ss_pred HHHHHHHHHHhhhhcccccccee---EEeCCchHHHHHcCCeecC-----------------------------------
Confidence 988888887 45777 9999999999999985320
Q ss_pred CCccccCeEEEEe-CCeEEEEEecCCCCCCCCHHHHHHHhcc
Q 024977 215 SSVLQQGGMFVFK-GKQLLYARKDEGTGDHASLDDVFDICCK 255 (259)
Q Consensus 215 ~~~~~~gg~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~~~ 255 (259)
.+...|.+|||| +|+|+|.+......+ ..++++++++++
T Consensus 156 -~g~~~P~~~lID~~G~I~~~~~g~~~~~-~~~~~il~~l~~ 195 (222)
T 3ztl_A 156 -DGNAFRGLFIIDPNGILRQITINDKPVG-RSVDETLRLLDA 195 (222)
T ss_dssp -TSSBCEEEEEECTTSEEEEEEEECTTBC-CCHHHHHHHHHH
T ss_pred -CCCccceEEEECCCCeEEEEEecCCCCC-CCHHHHHHHHHH
Confidence 124578999999 899999999876653 358999888754
No 37
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.90 E-value=5e-23 Score=168.93 Aligned_cols=148 Identities=10% Similarity=0.084 Sum_probs=122.6
Q ss_pred CCCCcccCCCCCCcEEecCCCCeEecccccccCCCcEEEEEEcCCC-CHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCCh
Q 024977 66 TEFPANVGDLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFG-CPCCWELASALKESKARFDSAGVKLIAVGVGTP 144 (259)
Q Consensus 66 ~~~~~~vG~~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~-Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~ 144 (259)
....+.+|+.+|+|++.|.+|+.++++++.|+ ++||.|| ++| |+.|+.+++.|++++++ .++++|+|+.+++
T Consensus 14 ~~~~l~~G~~~P~f~l~~~~G~~v~l~~~~gk---~vvl~F~-~t~~C~~C~~~~~~l~~l~~~---~~v~vv~Is~D~~ 86 (175)
T 1xvq_A 14 VGELPAVGSPAPAFTLTGGDLGVISSDQFRGK---SVLLNIF-PSVDTPVCATSVRTFDERAAA---SGATVLCVSKDLP 86 (175)
T ss_dssp SSCCCCTTSBCCCCEEECTTSCEEEGGGGTTS---CEEEEEC-SCCCSSCCCHHHHHHHHHHHH---TTCEEEEEESSCH
T ss_pred cCCCCCcCCcCCCeEEECCCCCEEeHHHcCCC---EEEEEEE-eCCCCchHHHHHHHHHHHHhh---cCCEEEEEECCCH
Confidence 34567899999999999999999999999875 6666555 555 99999999999999987 7899999999999
Q ss_pred HHHHHHHh--hC-CCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCccccC
Q 024977 145 NKAQILAE--RL-PFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSVLQQG 221 (259)
Q Consensus 145 ~~~~~f~~--~~-~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g 221 (259)
+..++|.+ ++ +|| +++|+++++++.||+..... . ..+...|
T Consensus 87 ~~~~~~~~~~~~~~~~---~l~D~~~~~~~~~gv~~~~~--------------------------------~-~~g~~~p 130 (175)
T 1xvq_A 87 FAQKRFCGAEGTENVM---PASAFRDSFGEDYGVTIADG--------------------------------P-MAGLLAR 130 (175)
T ss_dssp HHHTTCC------CEE---EEECTTSSHHHHTTCBBCSS--------------------------------T-TTTSBCS
T ss_pred HHHHHHHHHcCCCCce---EeeCCHHHHHHHhCCccccc--------------------------------c-cCCcccc
Confidence 98888887 45 677 99999999999999853210 0 0135688
Q ss_pred eEEEEe-CCeEEEEEecCCCCCCCCHHHHHHHhccC
Q 024977 222 GMFVFK-GKQLLYARKDEGTGDHASLDDVFDICCKV 256 (259)
Q Consensus 222 g~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~~~~ 256 (259)
.+|||| +|+|+|.+...+..+.++++++|+++.+.
T Consensus 131 ~~~lid~~G~I~~~~~g~~~~~~~~~~~~l~~l~~~ 166 (175)
T 1xvq_A 131 AIVVIGADGNVAYTELVPEIAQEPNYEAALAALGAT 166 (175)
T ss_dssp EEEEECTTSBEEEEEECSBTTCCCCHHHHHHHHHHT
T ss_pred eEEEECCCCeEEEEEECCCcCCCCCHHHHHHHHHhh
Confidence 999999 89999999988888999999999998764
No 38
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.90 E-value=3.3e-23 Score=167.86 Aligned_cols=145 Identities=17% Similarity=0.259 Sum_probs=123.8
Q ss_pred CCCCcccCCCCCCcEEecCCCCeEecccccccCCCcEEEEEEcCCC-CHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCCh
Q 024977 66 TEFPANVGDLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFG-CPCCWELASALKESKARFDSAGVKLIAVGVGTP 144 (259)
Q Consensus 66 ~~~~~~vG~~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~-Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~ 144 (259)
....+.+|+.+|+|++.|.+|+.++++++.|+ ++||.|| ++| |+.|+.+++.|+++++++ .++++|+|+.+++
T Consensus 14 ~~~~~~~G~~~p~f~l~~~~G~~~~l~~~~gk---~~vl~F~-~~~~C~~C~~~~~~l~~l~~~~--~~~~vv~is~d~~ 87 (167)
T 2jsy_A 14 VGQEVKVGDQAPDFTVLTNSLEEKSLADMKGK---VTIISVI-PSIDTGVCDAQTRRFNEEAAKL--GDVNVYTISADLP 87 (167)
T ss_dssp SSCCCCTTSCCCCCEEEBTTCCEEEHHHHTTS---CEEEEEC-SCSTTSHHHHTHHHHHHHHHHH--SSCEEEEEECSSG
T ss_pred ccCccCCCCcCCceEEECCCCCEeeHHHhCCC---eEEEEEe-cCCCCCchHHHHHHHHHHHHHc--CCCEEEEEECCCH
Confidence 34567899999999999999999999999875 5555555 666 999999999999999999 7999999999998
Q ss_pred HHHHHHHhh--C-CCCCCCcccC-CchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCcccc
Q 024977 145 NKAQILAER--L-PFPMDCLYAD-PDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSVLQQ 220 (259)
Q Consensus 145 ~~~~~f~~~--~-~fp~~~ll~D-~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 220 (259)
+..++|.+. + +|| +++| +++++++.||+.... .++..
T Consensus 88 ~~~~~~~~~~~~~~~~---~~~d~~~~~~~~~~~v~~~~------------------------------------~g~~~ 128 (167)
T 2jsy_A 88 FAQARWCGANGIDKVE---TLSDHRDMSFGEAFGVYIKE------------------------------------LRLLA 128 (167)
T ss_dssp GGTSCCGGGSSCTTEE---EEEGGGTCHHHHHTTCBBTT------------------------------------TCSBC
T ss_pred HHHHHHHHhcCCCCce---EeeCCchhHHHHHhCCcccc------------------------------------CCcee
Confidence 888888884 5 677 8999 899999999985310 12347
Q ss_pred CeEEEEe-CCeEEEEEecCCCCCCCCHHHHHHHhcc
Q 024977 221 GGMFVFK-GKQLLYARKDEGTGDHASLDDVFDICCK 255 (259)
Q Consensus 221 gg~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~~~ 255 (259)
|.+|||| +|+|+|.|...+..++++++++++.+++
T Consensus 129 p~~~lid~~G~i~~~~~g~~~~~~~~~~~l~~~l~~ 164 (167)
T 2jsy_A 129 RSVFVLDENGKVVYAEYVSEATNHPNYEKPIEAAKA 164 (167)
T ss_dssp CEEEEECTTSCEEEEEECSBTTSCCCSHHHHHHHHH
T ss_pred eEEEEEcCCCcEEEEEecCCcCCCCCHHHHHHHHHH
Confidence 8999999 8999999999989999999999998864
No 39
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.90 E-value=7.1e-23 Score=174.53 Aligned_cols=147 Identities=12% Similarity=0.104 Sum_probs=121.8
Q ss_pred CCCCcccCCCCCCcEEec---CCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC
Q 024977 66 TEFPANVGDLLGDFSIFT---AAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG 142 (259)
Q Consensus 66 ~~~~~~vG~~aPdf~l~d---~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~ 142 (259)
....+.+|+.+|+|++.+ .+|+.++|+++.|+ ++||+||+++|||+|..+++.|++++++|++.|++||+|+.+
T Consensus 23 ~~~~l~~G~~aP~f~l~~~~~~~g~~v~l~d~~Gk---~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D 99 (220)
T 1zye_A 23 EDPAPAVTQHAPYFKGTAVVSGEFKEISLDDFKGK---YLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVD 99 (220)
T ss_dssp ----CCTTSBCCCCEEEEECSSSEEEEEGGGGTTS---EEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESS
T ss_pred cCCcccCCCCCCCcEEEeeeCCCCcEEEHHHhCCC---eEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECC
Confidence 345678999999999984 57899999999885 777777779999999999999999999999999999999999
Q ss_pred ChHHHHHHHhh---------CCCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCC
Q 024977 143 TPNKAQILAER---------LPFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDD 213 (259)
Q Consensus 143 ~~~~~~~f~~~---------~~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~ 213 (259)
+.+.+++|.+. ++|| +++|+++++++.||+....
T Consensus 100 ~~~~~~~~~~~~~~~~g~~~~~fp---~l~D~~~~i~~~ygv~~~~---------------------------------- 142 (220)
T 1zye_A 100 SHFSHLAWINTPRKNGGLGHMNIA---LLSDLTKQISRDYGVLLEG---------------------------------- 142 (220)
T ss_dssp CHHHHHHHHTSCGGGTCCCSCSSE---EEECTTSHHHHHTTCEETT----------------------------------
T ss_pred CHHHHHHHHHHHHHhCCCcCCceE---EEECCcHHHHHHhCCeecC----------------------------------
Confidence 99999999873 4677 8999999999999985310
Q ss_pred CCCccccCeEEEEe-CCeEEEEEecCCCCCCCCHHHHHHHhcc
Q 024977 214 RSSVLQQGGMFVFK-GKQLLYARKDEGTGDHASLDDVFDICCK 255 (259)
Q Consensus 214 ~~~~~~~gg~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~~~ 255 (259)
.++..|.+|||| +|+|+|.+.... ....+.+++++++++
T Consensus 143 --~g~~~P~~~liD~~G~I~~~~~g~~-~~~~~~~ell~~l~~ 182 (220)
T 1zye_A 143 --PGLALRGLFIIDPNGVIKHLSVNDL-PVGRSVEETLRLVKA 182 (220)
T ss_dssp --TTEECEEEEEECTTSBEEEEEEECT-TCCCCHHHHHHHHHH
T ss_pred --CCcccceEEEECCCCEEEEEEecCC-CCCCCHHHHHHHHHH
Confidence 024578999999 899999998763 345688998887754
No 40
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.90 E-value=9e-23 Score=170.32 Aligned_cols=144 Identities=17% Similarity=0.191 Sum_probs=122.5
Q ss_pred CcccCCCCCCcEEecC-CC--CeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCChH
Q 024977 69 PANVGDLLGDFSIFTA-AG--EPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTPN 145 (259)
Q Consensus 69 ~~~vG~~aPdf~l~d~-~G--~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~~ 145 (259)
.+.+|+.+|+|++.+. +| +.++++++.|+ ++||+||+++||+.|..+++.|++++++|++.|+++|+|+.++.+
T Consensus 4 ~l~~G~~aP~f~l~~~~~g~~~~v~l~~~~gk---~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~ 80 (197)
T 1qmv_A 4 NARIGKPAPDFKATAVVDGAFKEVKLSDYKGK---YVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQF 80 (197)
T ss_dssp TBCTTSBCCCCEEEEEETTEEEEEEGGGGTTS---EEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHH
T ss_pred cccCCCCCCCeEeEeecCCCccEEEHHHHCCC---eEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHH
Confidence 5779999999999997 88 99999999885 777777779999999999999999999999999999999999998
Q ss_pred HHHHHHhh---------CCCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCC
Q 024977 146 KAQILAER---------LPFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSS 216 (259)
Q Consensus 146 ~~~~f~~~---------~~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~ 216 (259)
..++|.+. ++|| ++.|+++++++.||+.... .
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~p---~l~D~~~~~~~~~gv~~~~------------------------------------~ 121 (197)
T 1qmv_A 81 THLAWINTPRKEGGLGPLNIP---LLADVTRRLSEDYGVLKTD------------------------------------E 121 (197)
T ss_dssp HHHHHHTSCGGGTCCCSCSSC---EEECTTCHHHHHTTCEETT------------------------------------T
T ss_pred HHHHHHHHHHhhCCCCCCceE---EEECCcHHHHHHcCCccCC------------------------------------C
Confidence 88889873 4677 8999999999999985310 1
Q ss_pred ccccCeEEEEe-CCeEEEEEecCCCCCCCCHHHHHHHhcc
Q 024977 217 VLQQGGMFVFK-GKQLLYARKDEGTGDHASLDDVFDICCK 255 (259)
Q Consensus 217 ~~~~gg~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~~~ 255 (259)
.+..|++|||| +|+|++.+...... ..+++++++.+.+
T Consensus 122 ~~~~P~~~lid~~G~i~~~~~g~~~~-~~~~~e~l~~l~~ 160 (197)
T 1qmv_A 122 GIAYRGLFIIDGKGVLRQITVNDLPV-GRSVDEALRLVQA 160 (197)
T ss_dssp TEECEEEEEECTTSBEEEEEEECTTB-CCCHHHHHHHHHH
T ss_pred CceeeEEEEECCCCcEEEEEeCCCCC-CCCHHHHHHHHHh
Confidence 24578999999 89999999876443 5688999888754
No 41
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.89 E-value=1.6e-22 Score=167.19 Aligned_cols=143 Identities=13% Similarity=0.144 Sum_probs=120.4
Q ss_pred cccCCCCCCcEEecCCCC----eEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCChH
Q 024977 70 ANVGDLLGDFSIFTAAGE----PVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTPN 145 (259)
Q Consensus 70 ~~vG~~aPdf~l~d~~G~----~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~~ 145 (259)
+.+|+.+|+|++.|.+|+ .++++++.|+ ++||.|||++||+.|..+++.|+++++++++.|+++++|+.++.+
T Consensus 1 ~~~G~~~P~f~l~~~~g~~~~~~~~l~~~~gk---~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~ 77 (187)
T 1we0_A 1 SLIGTEVQPFRAQAFQSGKDFFEVTEADLKGK---WSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHF 77 (187)
T ss_dssp CCTTCBCCCCEEEEECSSSCCEEEETTTTSSS---EEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCHH
T ss_pred CCCCCcCCCeEEeccCCCccceEecHHHHCCC---CEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCHH
Confidence 468999999999999999 9999999875 777777779999999999999999999999999999999999998
Q ss_pred HHHHHHhh------CCCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCccc
Q 024977 146 KAQILAER------LPFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSVLQ 219 (259)
Q Consensus 146 ~~~~f~~~------~~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 219 (259)
.+++|.+. ++|| +++|+++++++.||+.... .+..
T Consensus 78 ~~~~~~~~~~~~~~~~~~---~~~d~~~~~~~~~~v~~~~------------------------------------~g~~ 118 (187)
T 1we0_A 78 VHKAWHENSPAVGSIEYI---MIGDPSQTISRQFDVLNEE------------------------------------TGLA 118 (187)
T ss_dssp HHHHHHHSCHHHHTCCSE---EEECTTCHHHHHTTCEETT------------------------------------TTEE
T ss_pred HHHHHHHHhccccCCCce---EEECCchHHHHHhCCCcCC------------------------------------CCce
Confidence 89999873 5677 8999999999999985320 0245
Q ss_pred cCeEEEEe-CCeEEEEEecCCCCCCCCHHHHHHHhcc
Q 024977 220 QGGMFVFK-GKQLLYARKDEGTGDHASLDDVFDICCK 255 (259)
Q Consensus 220 ~gg~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~~~ 255 (259)
.|.+|||| +|+|++.|......+ .+.++|++.+++
T Consensus 119 ~P~~~lid~~G~i~~~~~g~~~~~-~~~~~l~~~l~~ 154 (187)
T 1we0_A 119 DRGTFIIDPDGVIQAIEINADGIG-RDASTLINKVKA 154 (187)
T ss_dssp CEEEEEECTTSBEEEEEEECTTSC-CCTTHHHHHHHH
T ss_pred eeEEEEECCCCeEEEEEecCCCCC-CCHHHHHHHHHH
Confidence 78999999 899999998875433 367777776643
No 42
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.89 E-value=7.1e-23 Score=170.14 Aligned_cols=141 Identities=10% Similarity=0.077 Sum_probs=119.7
Q ss_pred ccCCCCCCcEEecC--CC--CeEecccc-cccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCChH
Q 024977 71 NVGDLLGDFSIFTA--AG--EPVLFKDL-WDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTPN 145 (259)
Q Consensus 71 ~vG~~aPdf~l~d~--~G--~~v~lsdl-~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~~ 145 (259)
++|+.+|+|++.+. +| +.++++++ .|+ ++||+||+++|||.|..+++.|+++++++++.|+++|+|+.++.+
T Consensus 1 ~~G~~aP~f~l~~~~~~G~~~~~~l~~~~~gk---~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~~ 77 (192)
T 2h01_A 1 AFQGQAPSFKAEAVFGDNTFGEVSLSDFIGKK---YVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSKF 77 (192)
T ss_dssp CCSSBCCCCEEEEECTTSCEEEEEGGGGTTTC---EEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCHH
T ss_pred CCCCcCCCcEeEeeecCCceeEEeHHHHcCCC---eEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCHH
Confidence 47999999999998 99 99999999 775 777777779999999999999999999999999999999999999
Q ss_pred HHHHHHhh---------CCCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCC
Q 024977 146 KAQILAER---------LPFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSS 216 (259)
Q Consensus 146 ~~~~f~~~---------~~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~ 216 (259)
.+++|.+. ++|| +++|+++++++.||+... .
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~---~l~D~~~~~~~~~gv~~~-------------------------------------~ 117 (192)
T 2h01_A 78 THLAWKKTPLSQGGIGNIKHT---LISDISKSIARSYDVLFN-------------------------------------E 117 (192)
T ss_dssp HHHHHHTSCGGGTCCCSCSSE---EEECTTSHHHHHTTCEET-------------------------------------T
T ss_pred HHHHHHHhHHhhCCccCCCcC---eEECCcHHHHHHhCCcCc-------------------------------------C
Confidence 99999873 4677 899999999999998530 0
Q ss_pred ccccCeEEEEe-CCeEEEEEecCCCCCCCCHHHHHHHhcc
Q 024977 217 VLQQGGMFVFK-GKQLLYARKDEGTGDHASLDDVFDICCK 255 (259)
Q Consensus 217 ~~~~gg~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~~~ 255 (259)
++..|.+|||| +|+|+|.+.+....+ .+.+++++.+.+
T Consensus 118 g~~~P~~~liD~~G~i~~~~~g~~~~~-~~~~~l~~~l~~ 156 (192)
T 2h01_A 118 SVALRAFVLIDKQGVVQHLLVNNLALG-RSVDEILRLIDA 156 (192)
T ss_dssp TEECCEEEEECTTSBEEEEEEGGGSSG-GGHHHHHHHHHH
T ss_pred CceeeEEEEEcCCCEEEEEEeCCCCCC-CCHHHHHHHHHH
Confidence 24578999999 899999998765433 478888887754
No 43
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.88 E-value=4.7e-22 Score=165.72 Aligned_cols=143 Identities=13% Similarity=0.243 Sum_probs=121.3
Q ss_pred CcccCCCCCCcEEecCC-------------C--CeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCC
Q 024977 69 PANVGDLLGDFSIFTAA-------------G--EPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAG 133 (259)
Q Consensus 69 ~~~vG~~aPdf~l~d~~-------------G--~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~g 133 (259)
.+.+|+.+|+|++.+.+ | +.++++++.|+ ++||.||+++|||.|..+++.|+++++++++.|
T Consensus 3 ~l~~G~~~P~f~l~~~~~~~~~~~~~~~~~G~~~~v~l~~~~gk---~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~ 79 (195)
T 2bmx_A 3 LLTIGDQFPAYQLTALIGGDLSKVDAKQPGDYFTTITSDEHPGK---WRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRD 79 (195)
T ss_dssp BCCTTCBCCCCEEEEECSSCGGGSCCSSGGGGEEEEETTSSTTC---EEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTT
T ss_pred cCCCCCcCCCcCcccccccccccccccccCCCccEeeHHHhCCC---cEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCC
Confidence 47799999999999987 7 89999999875 777777779999999999999999999999889
Q ss_pred cEEEEEeCCChHHHHHHHhh------CCCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcc
Q 024977 134 VKLIAVGVGTPNKAQILAER------LPFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTI 207 (259)
Q Consensus 134 v~vv~Vs~~~~~~~~~f~~~------~~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~ 207 (259)
+++|+|+.++.+.+++|.+. ++|| +++|+++++++.||+...
T Consensus 80 v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~---~~~d~~~~~~~~~~v~~~----------------------------- 127 (195)
T 2bmx_A 80 AQILGVSIDSEFAHFQWRAQHNDLKTLPFP---MLSDIKRELSQAAGVLNA----------------------------- 127 (195)
T ss_dssp EEEEEEESSCHHHHHHHHHHCTTGGGCCSC---EEECTTSHHHHHHTCBCT-----------------------------
T ss_pred CEEEEEECCCHHHHHHHHHHhccccCCcee---EEeCCchHHHHHhCCccc-----------------------------
Confidence 99999999999889999873 5677 899999999999998531
Q ss_pred cccCCCCCCccccCeEEEEe-CCeEEEEEecCCCCCCCCHHHHHHHhcc
Q 024977 208 EATPDDRSSVLQQGGMFVFK-GKQLLYARKDEGTGDHASLDDVFDICCK 255 (259)
Q Consensus 208 ~~~~~~~~~~~~~gg~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~~~ 255 (259)
.+...|.+|||| +|+|++.+......+ .+.++|++.+++
T Consensus 128 --------~g~~~P~~~lid~~G~i~~~~~g~~~~~-~~~~~l~~~l~~ 167 (195)
T 2bmx_A 128 --------DGVADRVTFIVDPNNEIQFVSATAGSVG-RNVDEVLRVLDA 167 (195)
T ss_dssp --------TSSBCEEEEEECTTSBEEEEEEECTTCC-CCHHHHHHHHHH
T ss_pred --------CCCccceEEEEcCCCeEEEEEecCCCCC-CCHHHHHHHHHH
Confidence 013578999999 899999998765433 478888887754
No 44
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=99.88 E-value=2.4e-22 Score=180.91 Aligned_cols=131 Identities=11% Similarity=0.198 Sum_probs=113.9
Q ss_pred CCCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCChHHHHHHHh--
Q 024977 75 LLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTPNKAQILAE-- 152 (259)
Q Consensus 75 ~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~~~~~~f~~-- 152 (259)
++|+|+|+|.+|++++|+|++|+ ++||+||+..|||.|..|++.|++. ...|++|++||.|+++.+++|++
T Consensus 3 k~p~F~l~~~~G~~~~Lsd~~Gk---~vvl~F~p~~~tp~C~~e~~~~~~~----~~~~~~v~gis~D~~~~~~~f~~~~ 75 (322)
T 4eo3_A 3 RVKHFELLTDEGKTFTHVDLYGK---YTILFFFPKAGTSGSTREAVEFSRE----NFEKAQVVGISRDSVEALKRFKEKN 75 (322)
T ss_dssp BCCCCEEEETTSCEEEGGGTTTS---EEEEEECSSTTSHHHHHHHHHHHHS----CCTTEEEEEEESCCHHHHHHHHHHH
T ss_pred CCCCcEEECCCcCEEeHHHhCCC---eEEEEEECCCCCCCCHHHHHHHHHH----hhCCCEEEEEeCCCHHHHHHHHHhh
Confidence 68999999999999999999997 8999999999999999999998752 34589999999999999999998
Q ss_pred hCCCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCccccCeEEEEe-CCeE
Q 024977 153 RLPFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSVLQQGGMFVFK-GKQL 231 (259)
Q Consensus 153 ~~~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gg~fVid-~g~V 231 (259)
+++|| +++|++++++++||+... +...|++|||| +|+|
T Consensus 76 ~l~fp---~l~D~~~~v~~~ygv~~~--------------------------------------~~~~r~tfiId~~G~i 114 (322)
T 4eo3_A 76 DLKVT---LLSDPEGILHEFFNVLEN--------------------------------------GKTVRSTFLIDRWGFV 114 (322)
T ss_dssp TCCSE---EEECTTCHHHHHTTCEET--------------------------------------TEECCEEEEECTTSBE
T ss_pred CCceE---EEEcCchHHHHhcCCCCC--------------------------------------CcCccEEEEECCCCEE
Confidence 68888 999999999999998421 13457999999 8999
Q ss_pred EEEEecCCCCCCCCHHHHHHHhcc
Q 024977 232 LYARKDEGTGDHASLDDVFDICCK 255 (259)
Q Consensus 232 ~y~~~~~~~~d~~~~~~iL~a~~~ 255 (259)
+|.|+.-.+.+| ++|||+.+++
T Consensus 115 ~~~~~~v~~~~h--~~~~l~~~~~ 136 (322)
T 4eo3_A 115 RKEWRRVKVEGH--VQEVKEALDR 136 (322)
T ss_dssp EEEEESCCSTTH--HHHHHHHHHH
T ss_pred EEEEeCCCcccc--HHHHHHHHhh
Confidence 999998777664 6788887754
No 45
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.87 E-value=1e-21 Score=166.81 Aligned_cols=139 Identities=17% Similarity=0.303 Sum_probs=115.4
Q ss_pred CCCcccCCCCCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeC-----
Q 024977 67 EFPANVGDLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGV----- 141 (259)
Q Consensus 67 ~~~~~vG~~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~----- 141 (259)
...+++|+++|+|++.|.+|+.++++++.|+ ++||++||++|||+|+.+++.|+++++++++.|+++|+|+.
T Consensus 29 ~~~l~~G~~aP~f~l~~~~G~~v~l~~~~gk---~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~ 105 (218)
T 3u5r_E 29 SNSITLGTRAADFVLPDAGGNLFTLAEFKDS---PALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQA 105 (218)
T ss_dssp CCCCCTTCBCCCCCEECTTCCEECGGGGTTC---SEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTT
T ss_pred CCcCCCCCcCCCcEeECCCCCEEeHHHhCCC---CeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccc
Confidence 4678899999999999999999999999986 66777888999999999999999999999999999999999
Q ss_pred ---CChHHHHHHHh--hCCCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCC
Q 024977 142 ---GTPNKAQILAE--RLPFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSS 216 (259)
Q Consensus 142 ---~~~~~~~~f~~--~~~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~ 216 (259)
++.+.+++|.+ +++|| ++.|.++++++.||+..
T Consensus 106 ~~~d~~~~~~~~~~~~~~~~~---~l~D~~~~~~~~~~v~~--------------------------------------- 143 (218)
T 3u5r_E 106 FPEETLERVGAEVKAYGYGFP---YLKDASQSVAKAYGAAC--------------------------------------- 143 (218)
T ss_dssp CGGGSHHHHHHHHHHHTCCSC---EEECTTCHHHHHHTCCE---------------------------------------
T ss_pred cccCCHHHHHHHHHHhCCCcc---EEECCccHHHHHcCCCC---------------------------------------
Confidence 67788899988 57888 99999999999988731
Q ss_pred ccccCeEEEEe-CCeEEEEEecCCC----CCCCCHHHHHHHh
Q 024977 217 VLQQGGMFVFK-GKQLLYARKDEGT----GDHASLDDVFDIC 253 (259)
Q Consensus 217 ~~~~gg~fVid-~g~V~y~~~~~~~----~d~~~~~~iL~a~ 253 (259)
.|.+|||| +|+|+|.....+. ......++|.+++
T Consensus 144 ---~P~~~liD~~G~i~~~g~~d~~~~~~~~~~~~~~l~~~i 182 (218)
T 3u5r_E 144 ---TPDFFLYDRERRLVYHGQFDDARPGNGKDVTGADLRAAV 182 (218)
T ss_dssp ---ESEEEEECTTCBEEEEECSSSCCTTSCCCCCCHHHHHHH
T ss_pred ---CCeEEEECCCCcEEEeccccccccccccccCHHHHHHHH
Confidence 35789998 8999988764432 2233445554444
No 46
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.87 E-value=8.6e-22 Score=164.37 Aligned_cols=142 Identities=13% Similarity=0.143 Sum_probs=119.3
Q ss_pred cccCCCCCCcEEecC--CCC---eEecccc-cccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCC
Q 024977 70 ANVGDLLGDFSIFTA--AGE---PVLFKDL-WDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGT 143 (259)
Q Consensus 70 ~~vG~~aPdf~l~d~--~G~---~v~lsdl-~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~ 143 (259)
+.+|+.+|+|++.|. +|+ .++++++ .|+ ++||.||+++||++|+.+++.|+++++++++.|+++|+|+.++
T Consensus 1 ~~~G~~~P~f~l~~~~~~G~~~~~v~l~~~~~gk---~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~ 77 (198)
T 1zof_A 1 MVVTKLAPDFKAPAVLGNNEVDEHFELSKNLGKN---GVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDS 77 (198)
T ss_dssp CCTTSBCCCCEEEEECTTSCEEEEEETTTSCCSS---EEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSC
T ss_pred CCCCCcCCceEeecccCCCcccceEEHHHHhCCC---cEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCC
Confidence 368999999999998 898 9999999 775 6777776699999999999999999999999999999999999
Q ss_pred hHHHHHHHhh---------CCCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCC
Q 024977 144 PNKAQILAER---------LPFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDR 214 (259)
Q Consensus 144 ~~~~~~f~~~---------~~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~ 214 (259)
++.+++|.+. ++|| +++|+++++++.||+... .
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~---~~~d~~~~~~~~~~v~~~--------------------------------~--- 119 (198)
T 1zof_A 78 EQVHFAWKNTPVEKGGIGQVSFP---MVADITKSISRDYDVLFE--------------------------------E--- 119 (198)
T ss_dssp HHHHHHHHTSCGGGTCCCCCSSC---EEECTTSHHHHHTTCEET--------------------------------T---
T ss_pred HHHHHHHHHhhhhcccccCceeE---EEECCchHHHHHhCCccc--------------------------------C---
Confidence 9889999874 4566 899999999999998531 0
Q ss_pred CCccccCeEEEEe-CCeEEEEEecCCCCCCCCHHHHHHHhcc
Q 024977 215 SSVLQQGGMFVFK-GKQLLYARKDEGTGDHASLDDVFDICCK 255 (259)
Q Consensus 215 ~~~~~~gg~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~~~ 255 (259)
+...|.+|||| +|+|++.+..... ...+.++|++.+.+
T Consensus 120 --g~~~P~~~lid~~G~i~~~~~g~~~-~~~~~~~l~~~l~~ 158 (198)
T 1zof_A 120 --AIALRGAFLIDKNMKVRHAVINDLP-LGRNADEMLRMVDA 158 (198)
T ss_dssp --TEECEEEEEEETTTEEEEEEEESSS-CCCHHHHHHHHHHH
T ss_pred --CcccceEEEECCCCEEEEEEecCCC-CCCCHHHHHHHHHH
Confidence 14578999999 8999999987433 34577888877654
No 47
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.86 E-value=1.5e-20 Score=149.39 Aligned_cols=137 Identities=20% Similarity=0.260 Sum_probs=115.1
Q ss_pred cccCCCCCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCC--hHHH
Q 024977 70 ANVGDLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGT--PNKA 147 (259)
Q Consensus 70 ~~vG~~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~--~~~~ 147 (259)
+.+|+++|+|++.|.+|+.++++++.++ ++||.| +++||+.|..+++.|+++++++.+.++.+++|+.+. .+.+
T Consensus 2 ~~~G~~~p~~~l~~~~g~~~~l~~~~gk---~vll~f-~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~ 77 (154)
T 3kcm_A 2 SLEENPAPDFTLNTLNGEVVKLSDLKGQ---VVIVNF-WATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAV 77 (154)
T ss_dssp -CTTSBCCCCEEECTTSCEEEGGGGTTS---EEEEEE-ECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHH
T ss_pred CCCCCCCCCeEEEcCCCCEEehhhcCCC---EEEEEE-ECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHH
Confidence 5789999999999999999999999774 555555 599999999999999999999998899999999987 6678
Q ss_pred HHHHh--hCCCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCccccCeEEE
Q 024977 148 QILAE--RLPFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSVLQQGGMFV 225 (259)
Q Consensus 148 ~~f~~--~~~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gg~fV 225 (259)
++|.+ +++|+ ++.|.++.+++.||+. ..|.+||
T Consensus 78 ~~~~~~~~~~~~---~~~d~~~~~~~~~~v~------------------------------------------~~P~~~l 112 (154)
T 3kcm_A 78 EEFFRKTGFTLP---VLLDADKRVGKLYGTT------------------------------------------GVPETFV 112 (154)
T ss_dssp HHHHHHHCCCCC---EEECTTCHHHHHHTCC------------------------------------------SBCEEEE
T ss_pred HHHHHHcCCCee---EEecCchHHHHHhCCC------------------------------------------CCCeEEE
Confidence 88887 57777 8999999999888863 1357899
Q ss_pred Ee-CCeEEEEEecCCCCCCCCHHHHHHHhcc
Q 024977 226 FK-GKQLLYARKDEGTGDHASLDDVFDICCK 255 (259)
Q Consensus 226 id-~g~V~y~~~~~~~~d~~~~~~iL~a~~~ 255 (259)
|| +|+|++.+......+.+++.+.|+.+..
T Consensus 113 id~~G~i~~~~~g~~~~~~~~l~~~l~~l~~ 143 (154)
T 3kcm_A 113 IDRHGVILKKVVGAMEWDHPEVIAFLNNELS 143 (154)
T ss_dssp ECTTSBEEEEEESCCCTTSHHHHHHHHTC--
T ss_pred ECCCCcEEEEEcCCCccccHHHHHHHHHHHH
Confidence 99 8999999998887777777777776643
No 48
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.86 E-value=1.1e-20 Score=155.27 Aligned_cols=147 Identities=15% Similarity=0.167 Sum_probs=117.6
Q ss_pred CCCcccCCCCCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCCh--
Q 024977 67 EFPANVGDLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTP-- 144 (259)
Q Consensus 67 ~~~~~vG~~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~-- 144 (259)
...+.+|+.+|+|++.|.+|+.++++++.|+ .+|++||++||+.|+.+++.|+++++++.+.++++++|+.+..
T Consensus 31 ~~~~~~g~~~p~f~l~~~~G~~~~l~~~~gk----~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~ 106 (186)
T 1jfu_A 31 LTMASAPLKLPDLAFEDADGKPKKLSDFRGK----TLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDP 106 (186)
T ss_dssp CEECCSCCBCCCCEEECTTSCEEEGGGGTTS----EEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCT
T ss_pred hccccCCCcCCCcEeEcCCCCEeeHHHcCCC----EEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCH
Confidence 4567899999999999999999999999874 4555556999999999999999999999888999999999854
Q ss_pred HHHHHHHhh--C-CCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCccccC
Q 024977 145 NKAQILAER--L-PFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSVLQQG 221 (259)
Q Consensus 145 ~~~~~f~~~--~-~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g 221 (259)
+.+++|.++ + .|| ++.|+++.+++.||+... ....|
T Consensus 107 ~~~~~~~~~~~~~~~~---~~~d~~~~~~~~~~~~~~--------------------------------------~~~~P 145 (186)
T 1jfu_A 107 EKPKTFLKEANLTRLG---YFNDQKAKVFQDLKAIGR--------------------------------------ALGMP 145 (186)
T ss_dssp THHHHHHHHTTCCTTC---CEECTTCHHHHHHHTTTC--------------------------------------CSSSS
T ss_pred HHHHHHHHHcCCCCCc---eEECCcchHHHHhccccc--------------------------------------cCCCC
Confidence 678888884 4 467 899999999998887421 12367
Q ss_pred eEEEEe-CCeEEEEEecCCCCCCCCHHHHHHHhccCCC
Q 024977 222 GMFVFK-GKQLLYARKDEGTGDHASLDDVFDICCKVPV 258 (259)
Q Consensus 222 g~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~~~~~~ 258 (259)
.+|||| +|+|++.|.+....+..++.+.|+.+.+.++
T Consensus 146 ~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~~~a 183 (186)
T 1jfu_A 146 TSVLVDPQGCEIATIAGPAEWASEDALKLIRAATGKAA 183 (186)
T ss_dssp EEEEECTTSBEEEEEESCCCTTSHHHHHHHHHHHC---
T ss_pred EEEEECCCCCEEEEEecCCccCHHHHHHHHHHHhcccc
Confidence 999999 8999999987755556667777776655443
No 49
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.85 E-value=1.8e-20 Score=155.13 Aligned_cols=139 Identities=17% Similarity=0.289 Sum_probs=113.6
Q ss_pred CCCcccCCCCCCcEEe-cCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeC----
Q 024977 67 EFPANVGDLLGDFSIF-TAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGV---- 141 (259)
Q Consensus 67 ~~~~~vG~~aPdf~l~-d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~---- 141 (259)
...+.+|+.+|+|++. |.+|+.++++++.|+ +.+|++||++||++|+.+++.|+++++++.+.|+++++|+.
T Consensus 15 ~~~~~~g~~~p~f~l~~~~~G~~~~l~~~~gk---~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~ 91 (196)
T 2ywi_A 15 SNMFPLGKQAPPFALTNVIDGNVVRLEDVKSD---AATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAE 91 (196)
T ss_dssp CCCCCTTCBCCCCEEEETTTCCEEEHHHHCCS---SEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTT
T ss_pred ccCCCcCCcCCceeeeecCCCCEEeHHHhCCC---CeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccc
Confidence 4567899999999999 999999999999886 55666777999999999999999999999999999999998
Q ss_pred ----CChHHHHHHHh--hCCCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCC
Q 024977 142 ----GTPNKAQILAE--RLPFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRS 215 (259)
Q Consensus 142 ----~~~~~~~~f~~--~~~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~ 215 (259)
++.+.+++|.+ +++|| ++.|.++++++.||+..
T Consensus 92 ~~~~d~~~~~~~~~~~~~~~~~---~~~d~~~~~~~~~~v~~-------------------------------------- 130 (196)
T 2ywi_A 92 QYPEDSPENMKKVAEELGYPFP---YLYDETQEVAKAYDAAC-------------------------------------- 130 (196)
T ss_dssp TCGGGSHHHHHHHHHHHTCCSC---EEECSSCHHHHHHTCCE--------------------------------------
T ss_pred cccccCHHHHHHHHHHcCCCce---EEECCchHHHHHhCCCC--------------------------------------
Confidence 56778888987 57777 89999999999887631
Q ss_pred CccccCeEEEEe-CCeEEEEEecCCC----CCCCCHHHHHHHh
Q 024977 216 SVLQQGGMFVFK-GKQLLYARKDEGT----GDHASLDDVFDIC 253 (259)
Q Consensus 216 ~~~~~gg~fVid-~g~V~y~~~~~~~----~d~~~~~~iL~a~ 253 (259)
.|.+|||| +|+|+|.+...+. ....+.++|.+.+
T Consensus 131 ----~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i 169 (196)
T 2ywi_A 131 ----TPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAAL 169 (196)
T ss_dssp ----ESEEEEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHH
T ss_pred ----CCeEEEEcCCCeEEEccccCcccccccCccCHHHHHHHH
Confidence 35789999 8999999875432 2233555555544
No 50
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.85 E-value=7.7e-21 Score=154.18 Aligned_cols=155 Identities=14% Similarity=0.260 Sum_probs=117.9
Q ss_pred CCCCCcccCCCCCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCH-hhHHHHHHHHHHHHHHhhCC--cEEEEEeC
Q 024977 65 ATEFPANVGDLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCP-CCWELASALKESKARFDSAG--VKLIAVGV 141 (259)
Q Consensus 65 ~~~~~~~vG~~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp-~C~~~l~~L~~~~~~~~~~g--v~vv~Vs~ 141 (259)
++...+.+|+.+|+|++.|.+|+.++++++.|+ + +|++||++||+ .|..+++.|+++++++++.| +++|+|+.
T Consensus 2 ~~~~~l~~g~~~p~f~l~~~~G~~~~l~~~~gk---~-vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~ 77 (174)
T 1xzo_A 2 SQQIKDPLNYEVEPFTFQNQDGKNVSLESLKGE---V-WLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSV 77 (174)
T ss_dssp -CCCCSCCCEECCCCEEECTTSCEEETGGGTTC---C-EEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEES
T ss_pred CCCCcCccccccCCcEEEcCCCCEEehhhcCCC---E-EEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEe
Confidence 355678899999999999999999999999875 5 55555699999 99999999999999999887 99999998
Q ss_pred C----ChHHHHHHHhh--CCC---CCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCC
Q 024977 142 G----TPNKAQILAER--LPF---PMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPD 212 (259)
Q Consensus 142 ~----~~~~~~~f~~~--~~f---p~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~ 212 (259)
+ +++.+++|.+. ++| + ++.|+++++.+.|++..- . .. ....+
T Consensus 78 d~~~d~~~~~~~~~~~~~~~~~~~~---~l~d~~~~~~~~~~~~~~-~-~~-----------------------~~~~~- 128 (174)
T 1xzo_A 78 DPENDKPKQLKKFAANYPLSFDNWD---FLTGYSQSEIEEFALKSF-K-AI-----------------------VKKPE- 128 (174)
T ss_dssp CTTTCCHHHHHHHHTTSCCCGGGEE---EEBCSCHHHHHHHHHHHH-C-CC-----------------------CCCCS-
T ss_pred CCCCCCHHHHHHHHHHcCCCCcceE---EEeCCCHHHHHHHHHhhc-C-ee-----------------------EeecC-
Confidence 6 56788999985 455 5 789999998888875210 0 00 00001
Q ss_pred CCCCccccCeEEEEe-CCeEEEEEecCCCCCCCCHHHHHHHhcc
Q 024977 213 DRSSVLQQGGMFVFK-GKQLLYARKDEGTGDHASLDDVFDICCK 255 (259)
Q Consensus 213 ~~~~~~~~gg~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~~~ 255 (259)
...+....|.+|||| +|+|++.|..... .+.++|++.+++
T Consensus 129 ~~~~~~~~p~~~lid~~G~i~~~~~g~~~---~~~~~l~~~l~~ 169 (174)
T 1xzo_A 129 GEDQVIHQSSFYLVGPDGKVLKDYNGVEN---TPYDDIISDVKS 169 (174)
T ss_dssp SCCSCCSCCEEEEECTTSEEEEEEESSSS---CCHHHHHHHHHH
T ss_pred CCCeeeeeeEEEEECCCCeEEEEEcCCCC---CCHHHHHHHHHH
Confidence 111256788999999 8999999986653 456777766653
No 51
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.85 E-value=2.2e-20 Score=147.99 Aligned_cols=137 Identities=18% Similarity=0.229 Sum_probs=113.3
Q ss_pred CcccCCCCCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC-ChHHH
Q 024977 69 PANVGDLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG-TPNKA 147 (259)
Q Consensus 69 ~~~vG~~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~-~~~~~ 147 (259)
.+++|+++|+|++.+ +|+.++++++.++ + +|++|+++||+.|..+++.|.++++++.+.|+++++|+.+ +.+..
T Consensus 2 ~l~~G~~~P~f~l~~-~g~~~~l~~~~gk---~-vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~ 76 (152)
T 3gl3_A 2 SLDKGDKAPDFALPG-KTGVVKLSDKTGS---V-VYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDA 76 (152)
T ss_dssp CCCTTSBCCCCEEEB-SSSEEEGGGGTTS---E-EEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHH
T ss_pred CCCCCCcCCceEeeC-CCCeEeHHHhCCC---E-EEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHH
Confidence 368999999999999 9999999999774 4 4555559999999999999999999999999999999988 45667
Q ss_pred HHHHh--hCCCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCccccCeEEE
Q 024977 148 QILAE--RLPFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSVLQQGGMFV 225 (259)
Q Consensus 148 ~~f~~--~~~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gg~fV 225 (259)
++|.+ +++|+ ++.|+++++++.||+. ..|..||
T Consensus 77 ~~~~~~~~~~~~---~~~d~~~~~~~~~~v~------------------------------------------~~P~~~l 111 (152)
T 3gl3_A 77 MKFLAQVPAEFT---VAFDPKGQTPRLYGVK------------------------------------------GMPTSFL 111 (152)
T ss_dssp HHHHHHSCCCSE---EEECTTCHHHHHTTCC------------------------------------------SSSEEEE
T ss_pred HHHHHHcCCCCc---eeECCcchhHHHcCCC------------------------------------------CCCeEEE
Confidence 88887 46677 8999999988888763 1457899
Q ss_pred Ee-CCeEEEEEecCCCCCCCCHHHHHHHhcc
Q 024977 226 FK-GKQLLYARKDEGTGDHASLDDVFDICCK 255 (259)
Q Consensus 226 id-~g~V~y~~~~~~~~d~~~~~~iL~a~~~ 255 (259)
|| +|+|++.+.+....+..++++.++.+..
T Consensus 112 id~~G~i~~~~~g~~~~~~~~l~~~i~~~~~ 142 (152)
T 3gl3_A 112 IDRNGKVLLQHVGFRPADKEALEQQILAALG 142 (152)
T ss_dssp ECTTSBEEEEEESCCTTTHHHHHHHHHHHTC
T ss_pred ECCCCCEEEEEccCCCcCHHHHHHHHHHHHc
Confidence 98 8999999998766666666666665543
No 52
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.84 E-value=4.3e-20 Score=144.88 Aligned_cols=128 Identities=13% Similarity=0.224 Sum_probs=104.7
Q ss_pred ccCCCCCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHH---HHHHHhhCCcEEEEEeCC-ChHH
Q 024977 71 NVGDLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKE---SKARFDSAGVKLIAVGVG-TPNK 146 (259)
Q Consensus 71 ~vG~~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~---~~~~~~~~gv~vv~Vs~~-~~~~ 146 (259)
++|+++|+|++.|.+|+.++++++.|+ .+|++||++||++|+.+++.|.+ +++++++.|+.+++|+.+ +.+.
T Consensus 2 ~~G~~~p~f~l~~~~g~~~~l~~~~gk----~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~ 77 (142)
T 3ewl_A 2 NAGMKAADFTYVTVHGDNSRMSRLKAQ----YTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREE 77 (142)
T ss_dssp CTTSBCCCCEEECTTCCEEEGGGCCCS----EEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHH
T ss_pred CCCCcCCCCEEECCCCCEEEhhhcCCC----EEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHH
Confidence 589999999999999999999999874 56666679999999999999998 899999999999999998 5667
Q ss_pred HHHHHh--hCCCCCCCcccCCchHHHH--HhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCccccCe
Q 024977 147 AQILAE--RLPFPMDCLYADPDRKVYN--LLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSVLQQGG 222 (259)
Q Consensus 147 ~~~f~~--~~~fp~~~ll~D~~~~~~~--~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gg 222 (259)
+++|.+ +++|| ++.|.++.+.. .||+ ...|.
T Consensus 78 ~~~~~~~~~~~~~---~~~d~~~~~~~~~~~~v------------------------------------------~~~P~ 112 (142)
T 3ewl_A 78 WATKAVYMPQGWI---VGWNKAGDIRTRQLYDI------------------------------------------RATPT 112 (142)
T ss_dssp HHHHHTTSCTTCE---EEECTTCHHHHTTCSCC------------------------------------------CSSSE
T ss_pred HHHHHHHcCCCcc---eeeCCccchhhHHHcCC------------------------------------------CCCCe
Confidence 888888 46677 88998887765 4443 23568
Q ss_pred EEEEe-CCeEEEEEecCCCCCCCCHHHHHHHhcc
Q 024977 223 MFVFK-GKQLLYARKDEGTGDHASLDDVFDICCK 255 (259)
Q Consensus 223 ~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~~~ 255 (259)
+|||| +|+|++. ..+.+++.+.+.+
T Consensus 113 ~~lid~~G~i~~~--------~~~~~~l~~~l~~ 138 (142)
T 3ewl_A 113 IYLLDGRKRVILK--------DTSMEQLIDYLAT 138 (142)
T ss_dssp EEEECTTCBEEEC--------SCCHHHHHHHHHC
T ss_pred EEEECCCCCEEec--------CCCHHHHHHHHHH
Confidence 99999 8999882 2567777776654
No 53
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.84 E-value=5.5e-20 Score=144.76 Aligned_cols=130 Identities=13% Similarity=0.155 Sum_probs=102.0
Q ss_pred CCcccCCCCCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHH---HHHHHhhCCcEEEEEeCCCh
Q 024977 68 FPANVGDLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKE---SKARFDSAGVKLIAVGVGTP 144 (259)
Q Consensus 68 ~~~~vG~~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~---~~~~~~~~gv~vv~Vs~~~~ 144 (259)
....+|+.+|+|++.|.+|+.++++++.|+ .+|++||++||++|+.+++.|++ +++++++.++.+++|+.++.
T Consensus 3 ~~~~~G~~ap~f~l~~~~g~~~~l~~~~gk----~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~ 78 (142)
T 3eur_A 3 AKNRLGTKALNFTYTLDSGVKGTLYQFPAE----YTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEE 78 (142)
T ss_dssp CTTCTTSBCCCCEEEETTSCEEETTTCCCS----EEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSC
T ss_pred hhhcCCCccCCcEEEcCCCCEeeHHHcCCC----EEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCC
Confidence 345799999999999999999999999874 55555669999999999999999 99999999999999999875
Q ss_pred -HHHHHHHhh--CCCCCCCcccCCchH--HHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCccc
Q 024977 145 -NKAQILAER--LPFPMDCLYADPDRK--VYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSVLQ 219 (259)
Q Consensus 145 -~~~~~f~~~--~~fp~~~ll~D~~~~--~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 219 (259)
+..++|.+. ++|+ .+.|+++. +.+.|+ ...
T Consensus 79 ~~~~~~~~~~~~~~~~---~~~d~~~~~~~~~~~~------------------------------------------v~~ 113 (142)
T 3eur_A 79 LDEWKKHRNDFAKEWT---NGYDKELVIKNKNLYD------------------------------------------LRA 113 (142)
T ss_dssp HHHHHHHGGGSCTTSE---EEECTTCHHHHTTCSC------------------------------------------CTT
T ss_pred HHHHHHHHHhcccccc---cccCccchhhhhhhcC------------------------------------------CCc
Confidence 567777774 4555 66776654 222222 234
Q ss_pred cCeEEEEe-CCeEEEEEecCCCCCCCCHHHHHHHhc
Q 024977 220 QGGMFVFK-GKQLLYARKDEGTGDHASLDDVFDICC 254 (259)
Q Consensus 220 ~gg~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~~ 254 (259)
.|.+|||| +|+|++.+.. .++|.+.++
T Consensus 114 ~P~~~lid~~G~i~~~~~~--------~~~l~~~l~ 141 (142)
T 3eur_A 114 IPTLYLLDKNKTVLLKDAT--------LQKVEQYLA 141 (142)
T ss_dssp CSEEEEECTTCBEEEEEEC--------HHHHHHHHH
T ss_pred CCeEEEECCCCcEEecCCC--------HHHHHHHHh
Confidence 67999999 8999998763 566666554
No 54
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.83 E-value=6.5e-20 Score=145.68 Aligned_cols=120 Identities=12% Similarity=0.144 Sum_probs=101.6
Q ss_pred CCcccCCCCCCcEEecCCCCeEecc--cccccCCCcEEEEEEcCCCCHh--hHHHHHHHHHHHHHH-hhCCcEEEEEeCC
Q 024977 68 FPANVGDLLGDFSIFTAAGEPVLFK--DLWDQNEGVAVVALLRHFGCPC--CWELASALKESKARF-DSAGVKLIAVGVG 142 (259)
Q Consensus 68 ~~~~vG~~aPdf~l~d~~G~~v~ls--dl~~~~~~~vvL~f~r~~~Cp~--C~~~l~~L~~~~~~~-~~~gv~vv~Vs~~ 142 (259)
..+++|+.+|+|++.|.+|+.++++ ++.|+ .+|++||++||++ |+.+++.|+++++++ ++.|+++++|+.+
T Consensus 3 ~~l~~G~~~p~f~l~~~~g~~~~l~~~~~~gk----~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d 78 (150)
T 3fw2_A 3 AKSEIGKYAPFFSLPNAKGEKITRSSDAFKQK----SLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLD 78 (150)
T ss_dssp CTTSTTSBCCCCCEEBTTCCEECTTSTTTTTS----EEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECC
T ss_pred ccccCCCcCCccEeECCCCCEEecchhhhCCC----EEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcC
Confidence 4678999999999999999999999 99774 5555566899999 999999999999999 8889999999998
Q ss_pred Ch-HHHHHHHh--hCCCCCCCcccCC---chHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCC
Q 024977 143 TP-NKAQILAE--RLPFPMDCLYADP---DRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSS 216 (259)
Q Consensus 143 ~~-~~~~~f~~--~~~fp~~~ll~D~---~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~ 216 (259)
+. +..++|.+ +++|+ ++.|+ ++++++.||+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~---~~~d~~~~~~~~~~~~~v~---------------------------------------- 115 (150)
T 3fw2_A 79 VDKQQWKDAIKRDTLDWE---QVCDFGGLNSEVAKQYSIY---------------------------------------- 115 (150)
T ss_dssp SCHHHHHHHHHHTTCCSE---EECCSCGGGCHHHHHTTCC----------------------------------------
T ss_pred CCHHHHHHHHHHhCCCce---EEEcCcccchHHHHHcCCC----------------------------------------
Confidence 64 67888887 56777 88998 56777777652
Q ss_pred ccccCeEEEEe-CCeEEEEEe
Q 024977 217 VLQQGGMFVFK-GKQLLYARK 236 (259)
Q Consensus 217 ~~~~gg~fVid-~g~V~y~~~ 236 (259)
..|.+|||| +|+|++.+.
T Consensus 116 --~~P~~~lid~~G~i~~~~~ 134 (150)
T 3fw2_A 116 --KIPANILLSSDGKILAKNL 134 (150)
T ss_dssp --SSSEEEEECTTSBEEEESC
T ss_pred --ccCeEEEECCCCEEEEccC
Confidence 246889998 899999884
No 55
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.83 E-value=2.7e-20 Score=146.69 Aligned_cols=131 Identities=10% Similarity=0.095 Sum_probs=98.9
Q ss_pred CCCcccCCCCCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCC-hH
Q 024977 67 EFPANVGDLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGT-PN 145 (259)
Q Consensus 67 ~~~~~vG~~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~-~~ 145 (259)
...+.+|+.+|+|++ +.+|+.++++++.|+ .+|++||++||+.|..+++.|+++++++++.|+.+|+|+.+. .+
T Consensus 4 ~~~l~~G~~~P~f~l-~~~g~~~~l~~~~gk----~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~ 78 (143)
T 4fo5_A 4 TEGVNPGDLAPRIEF-LGNDAKASFHNQLGR----YTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKES 78 (143)
T ss_dssp CBSSSTTSBCCCCCC------CCCSCCSSCC----EEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHH
T ss_pred ccccCCcccCCceEE-cCCCCEEEHHHhCCC----EEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHH
Confidence 456889999999999 999999999999874 566666799999999999999999999998899999999984 56
Q ss_pred HHHHHHh--hCCCCCCCcccCCc---hHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCcccc
Q 024977 146 KAQILAE--RLPFPMDCLYADPD---RKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSVLQQ 220 (259)
Q Consensus 146 ~~~~f~~--~~~fp~~~ll~D~~---~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 220 (259)
..++|.+ +++||. +++|.+ .++++.||+. ..
T Consensus 79 ~~~~~~~~~~~~~~~--~~~d~~~~~~~~~~~~~v~------------------------------------------~~ 114 (143)
T 4fo5_A 79 IFTETVKIDKLDLST--QFHEGLGKESELYKKYDLR------------------------------------------KG 114 (143)
T ss_dssp HHHHHHHHHTCCGGG--EEECTTGGGSHHHHHTTGG------------------------------------------GC
T ss_pred HHHHHHHHhCCCCce--eeecccccchHHHHHcCCC------------------------------------------CC
Confidence 7888887 466621 778874 4555555542 25
Q ss_pred CeEEEEe-CCeEEEEEecCCCCCCCCHHHHHHHhc
Q 024977 221 GGMFVFK-GKQLLYARKDEGTGDHASLDDVFDICC 254 (259)
Q Consensus 221 gg~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~~ 254 (259)
|.+|||| +|+|++.+. ..+++.+.+.
T Consensus 115 P~~~lid~~G~i~~~~~--------~~~~l~~~l~ 141 (143)
T 4fo5_A 115 FKNFLINDEGVIIAANV--------TPEKLTEILK 141 (143)
T ss_dssp CCEEEECTTSBEEEESC--------CHHHHHHHHT
T ss_pred CcEEEECCCCEEEEccC--------CHHHHHHHHH
Confidence 6789999 899999764 3456655554
No 56
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.83 E-value=1.2e-19 Score=148.87 Aligned_cols=136 Identities=18% Similarity=0.187 Sum_probs=110.6
Q ss_pred CCcccCCCCCCcEEecC--CCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCc------EEEEE
Q 024977 68 FPANVGDLLGDFSIFTA--AGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGV------KLIAV 139 (259)
Q Consensus 68 ~~~~vG~~aPdf~l~d~--~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv------~vv~V 139 (259)
..+..|+++|+|++.+. +|+.++++++.++ .+|++||++||+.|+.+++.|+++++++++.|+ ++++|
T Consensus 29 ~~~~~g~~~p~f~l~~~~~~g~~~~l~~~~gk----~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v 104 (183)
T 3lwa_A 29 YDEADRQQLPDIGGDSLMEEGTQINLSDFENQ----VVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGI 104 (183)
T ss_dssp CCGGGCCCCCCCEEEBSSSTTCEEEGGGGTTS----EEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEE
T ss_pred cccccCCCCCceeccccccCCcEecHHHhCCC----EEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEE
Confidence 45788999999999999 9999999999874 455555599999999999999999999999999 99999
Q ss_pred eCCC--hHHHHHHHh--hCCCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCC
Q 024977 140 GVGT--PNKAQILAE--RLPFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRS 215 (259)
Q Consensus 140 s~~~--~~~~~~f~~--~~~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~ 215 (259)
+.++ .+..++|.+ +++|| ++.|+++.+.+.||...
T Consensus 105 ~~d~~~~~~~~~~~~~~~~~~~---~~~d~~~~~~~~~~~~~-------------------------------------- 143 (183)
T 3lwa_A 105 NVRDYSRDIAQDFVTDNGLDYP---SIYDPPFMTAASLGGVP-------------------------------------- 143 (183)
T ss_dssp ECSCCCHHHHHHHHHHTTCCSC---EEECTTCGGGGGTTTCC--------------------------------------
T ss_pred ECCCCCHHHHHHHHHHcCCCcc---EEECCcchHHHHhccCC--------------------------------------
Confidence 9987 778899988 56777 89999988877776311
Q ss_pred CccccCeEEEEe-CCeEEEEEecCCCCCCCCHHHHHHHhc
Q 024977 216 SVLQQGGMFVFK-GKQLLYARKDEGTGDHASLDDVFDICC 254 (259)
Q Consensus 216 ~~~~~gg~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~~ 254 (259)
....|.+|||| +|+|++.|... .+.++|.+.+.
T Consensus 144 -v~~~P~~~lid~~G~i~~~~~g~-----~~~~~l~~~l~ 177 (183)
T 3lwa_A 144 -ASVIPTTIVLDKQHRPAAVFLRE-----VTSKDVLDVAL 177 (183)
T ss_dssp -TTCCSEEEEECTTSCEEEEECSC-----CCHHHHHHHHH
T ss_pred -CCCCCeEEEECCCCcEEEEEcCC-----CCHHHHHHHHH
Confidence 22357899999 89999988743 35666666554
No 57
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.83 E-value=2.4e-19 Score=143.40 Aligned_cols=132 Identities=14% Similarity=0.197 Sum_probs=107.2
Q ss_pred CcccCCCCCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCCh-HHH
Q 024977 69 PANVGDLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTP-NKA 147 (259)
Q Consensus 69 ~~~vG~~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~-~~~ 147 (259)
....|+.+|+|++.|.+|+.++++++.|+ ++||. ||++||+.|+.+++.|+++++++++.|+++++|+.++. +..
T Consensus 8 ~~~~g~~~p~f~l~~~~G~~~~l~~~~gk---~vll~-F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~ 83 (152)
T 2lrt_A 8 DKIKEASIIDIQLKDLKGNTRSLTDLKGK---VVLID-FTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFW 83 (152)
T ss_dssp SSSCTTCSCCCCEEBTTSCEECTTTGGGS---EEEEE-EECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHH
T ss_pred hhccCCCCCCeEEEcCCCCEEeHHHhCCC---EEEEE-EEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHH
Confidence 44578999999999999999999999874 55554 55899999999999999999999999999999999865 446
Q ss_pred HHHHhhCCCCCCCcccCCchH---HHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCccccCeEE
Q 024977 148 QILAERLPFPMDCLYADPDRK---VYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSVLQQGGMF 224 (259)
Q Consensus 148 ~~f~~~~~fp~~~ll~D~~~~---~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gg~f 224 (259)
++|.++++|+ ++.|+++. +.+.||+. ..|.+|
T Consensus 84 ~~~~~~~~~~---~~~d~~~~~~~~~~~~~v~------------------------------------------~~P~~~ 118 (152)
T 2lrt_A 84 KTSADNLPWV---CVRDANGAYSSYISLYNVT------------------------------------------NLPSVF 118 (152)
T ss_dssp HHHHTTCSSE---EEECSSGGGCHHHHHHTCC------------------------------------------SCSEEE
T ss_pred HHHHhCCCce---EEECCCCcchHHHHHcCcc------------------------------------------cCceEE
Confidence 7777778888 89999886 77777652 145899
Q ss_pred EEe-CCeEEEEEecCCCCCCCCHHHHHHHhc
Q 024977 225 VFK-GKQLLYARKDEGTGDHASLDDVFDICC 254 (259)
Q Consensus 225 Vid-~g~V~y~~~~~~~~d~~~~~~iL~a~~ 254 (259)
||| +|+|++.+.+ ..++++.+..+.
T Consensus 119 lid~~G~i~~~~~g-----~~~~e~~~~~~~ 144 (152)
T 2lrt_A 119 LVNRNNELSARGEN-----IKDLDEAIKKLL 144 (152)
T ss_dssp EEETTTEEEEETTT-----CSCHHHHHHHHH
T ss_pred EECCCCeEEEecCC-----HHHHHHHHHHHH
Confidence 999 8999998764 355666665543
No 58
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.82 E-value=1.6e-19 Score=148.60 Aligned_cols=147 Identities=9% Similarity=0.042 Sum_probs=107.7
Q ss_pred CCCCcccCCCCCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC---
Q 024977 66 TEFPANVGDLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG--- 142 (259)
Q Consensus 66 ~~~~~~vG~~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~--- 142 (259)
...++++|+.+|+|++.|.+|+.++++++.|+ ++|++||++|||+|..+++.|+++++++++.|+++|+|+.+
T Consensus 17 ~~~~~~~g~~~p~f~l~~~~G~~~~l~~~~gk----~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~ 92 (183)
T 2obi_A 17 SRDDWRCARSMHEFSAKDIDGHMVNLDKYRGF----VCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFG 92 (183)
T ss_dssp --CCGGGCCSGGGCEEEBTTSCEEEGGGGTTS----EEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCST
T ss_pred cccCCcccCcccceEEEcCCCCEeeHHHcCCC----EEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCCCC
Confidence 45678899999999999999999999999874 56666679999999999999999999999999999999975
Q ss_pred -----ChHHHHHHHh--hCCCCCCCccc--CCchHH----HHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccc
Q 024977 143 -----TPNKAQILAE--RLPFPMDCLYA--DPDRKV----YNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEA 209 (259)
Q Consensus 143 -----~~~~~~~f~~--~~~fp~~~ll~--D~~~~~----~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~ 209 (259)
+.+.+++|.+ +++|| ++. |.++.. |+.++....
T Consensus 93 ~~e~~~~~~~~~~~~~~~~~~p---~~~~~d~~~~~~~~~~~~l~~~~~------------------------------- 138 (183)
T 2obi_A 93 KQEPGSNEEIKEFAAGYNVKFD---MFSKICVNGDDAHPLWKWMKIQPK------------------------------- 138 (183)
T ss_dssp TCCCSCHHHHHHHHHTTTCCSE---EBCCCCCSSTTSCHHHHHHHTSTT-------------------------------
T ss_pred CCCCCCHHHHHHHHHHcCCCce---EEeeeccCCcchhHHHHHhhccCC-------------------------------
Confidence 5677889988 46677 676 666542 222211000
Q ss_pred cCCCCC-CccccCeEEEEe-CCeEEEEEecCCCCCCCCHHHHHHHhcc
Q 024977 210 TPDDRS-SVLQQGGMFVFK-GKQLLYARKDEGTGDHASLDDVFDICCK 255 (259)
Q Consensus 210 ~~~~~~-~~~~~gg~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~~~ 255 (259)
..+-.+ .....|.+|||| +|+|++.+... .+.++|.+.+.+
T Consensus 139 ~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~-----~~~~~l~~~i~~ 181 (183)
T 2obi_A 139 GKGILGNAIKWNFTKFLIDKNGCVVKRYGPM-----EEPLVIEKDLPH 181 (183)
T ss_dssp TCCSSSSSCCSTTCEEEECTTSCEEEEECTT-----SCTHHHHTTSGG
T ss_pred CCCcccccccccceEEEECCCCCEEEEeCCC-----CCHHHHHHHHHH
Confidence 000000 133468999999 89999998752 345677666554
No 59
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.82 E-value=1e-19 Score=145.93 Aligned_cols=137 Identities=15% Similarity=0.191 Sum_probs=113.6
Q ss_pred CCCCcccCCCCCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCChH
Q 024977 66 TEFPANVGDLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTPN 145 (259)
Q Consensus 66 ~~~~~~vG~~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~~ 145 (259)
....+.+|+.+|+|++.|.+|+.++++++.++ ++||.| |++||+.|..+++.|+++++++.+.++.+++|+.+.
T Consensus 11 ~~~~~~~G~~~p~f~l~~~~g~~~~l~~~~gk---~vll~F-~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~-- 84 (158)
T 3hdc_A 11 DAPLVRTGALAPNFKLPTLSGENKSLAQYRGK---IVLVNF-WASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEK-- 84 (158)
T ss_dssp CSCCCCTTSBCCCCEEECTTSCEEESGGGTTS---EEEEEE-ECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSS--
T ss_pred CCcccCCCCcCCCceeEcCCCCEEehHHhCCC---EEEEEE-ECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCH--
Confidence 45667899999999999999999999999774 555555 599999999999999999999998899999999987
Q ss_pred HHHHHHh--hCCCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCccccCeE
Q 024977 146 KAQILAE--RLPFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSVLQQGGM 223 (259)
Q Consensus 146 ~~~~f~~--~~~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gg~ 223 (259)
..++|.+ +++|+ ++.|.++++.+.||+. ..|.+
T Consensus 85 ~~~~~~~~~~~~~~---~~~d~~~~~~~~~~v~------------------------------------------~~P~~ 119 (158)
T 3hdc_A 85 RFPEKYRRAPVSFN---FLSDATGQVQQRYGAN------------------------------------------RLPDT 119 (158)
T ss_dssp SCCGGGGGCCCSCE---EEECTTSHHHHHTTCC------------------------------------------SSSEE
T ss_pred HHHHHHHHcCCCce---EEECchHHHHHHhCCC------------------------------------------CcceE
Confidence 3556666 46677 8999999998888763 14578
Q ss_pred EEEe-CCeEEEEEecCCCCCCCCHHHHHHHh
Q 024977 224 FVFK-GKQLLYARKDEGTGDHASLDDVFDIC 253 (259)
Q Consensus 224 fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~ 253 (259)
|||| +|+|++.+.+....+.++..+-++..
T Consensus 120 ~lid~~G~i~~~~~G~~~~~~~~~~~~~~~~ 150 (158)
T 3hdc_A 120 FIVDRKGIIRQRVTGGIEWDAPKVVSYLKSL 150 (158)
T ss_dssp EEECTTSBEEEEEESCCCTTSHHHHHHHHTT
T ss_pred EEEcCCCCEEEEEeCCCccchHHHHHHHHhh
Confidence 9999 89999999998887777666655543
No 60
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.82 E-value=2.5e-19 Score=142.61 Aligned_cols=133 Identities=11% Similarity=0.148 Sum_probs=106.3
Q ss_pred CcccCCCCCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCC-hHHH
Q 024977 69 PANVGDLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGT-PNKA 147 (259)
Q Consensus 69 ~~~vG~~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~-~~~~ 147 (259)
.+.+|+.+|+|++.|.+|+.++++++.|+ + +|++||++||+.|+.+++.|+++++++.+.|+++++|+.+. .+..
T Consensus 2 ~l~~g~~~p~f~l~~~~G~~~~l~~~~gk---~-vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~ 77 (152)
T 2lrn_A 2 SLATGSVAPAITGIDLKGNSVSLNDFKGK---Y-VLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDW 77 (152)
T ss_dssp CSCTTEECCCCEEECSSSCEEESGGGTTS---E-EEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHH
T ss_pred CccCCCcCCCceeEcCCCCEEeHHHcCCC---E-EEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHH
Confidence 36789999999999999999999999774 4 55555599999999999999999999998999999999885 5667
Q ss_pred HHHHh--hCCCCCCCcccCC---chHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCccccCe
Q 024977 148 QILAE--RLPFPMDCLYADP---DRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSVLQQGG 222 (259)
Q Consensus 148 ~~f~~--~~~fp~~~ll~D~---~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gg 222 (259)
++|.+ +++|+ ++.|+ +.++++.||+. ..|.
T Consensus 78 ~~~~~~~~~~~~---~~~d~~~~~~~~~~~~~v~------------------------------------------~~P~ 112 (152)
T 2lrn_A 78 KKAIEEDKSYWN---QVLLQKDDVKDVLESYCIV------------------------------------------GFPH 112 (152)
T ss_dssp HHHHHHHTCCSE---EEEECHHHHHHHHHHTTCC------------------------------------------SSCE
T ss_pred HHHHHHhCCCCe---EEecccchhHHHHHHhCCC------------------------------------------cCCe
Confidence 78877 57777 89998 56777777652 1457
Q ss_pred EEEEe-CCeEEEEEecCCCCCCCCHHHHHHHhcc
Q 024977 223 MFVFK-GKQLLYARKDEGTGDHASLDDVFDICCK 255 (259)
Q Consensus 223 ~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~~~ 255 (259)
+|||| +|+|++.+.. ..++++.|+.+.+
T Consensus 113 ~~lid~~G~i~~~~~~-----~~~l~~~l~~l~~ 141 (152)
T 2lrn_A 113 IILVDPEGKIVAKELR-----GDDLYNTVEKFVN 141 (152)
T ss_dssp EEEECTTSEEEEECCC-----TTHHHHHHHHHHT
T ss_pred EEEECCCCeEEEeeCC-----HHHHHHHHHHHHh
Confidence 89998 8999998842 2355565555543
No 61
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=99.82 E-value=1.6e-19 Score=147.40 Aligned_cols=145 Identities=9% Similarity=0.094 Sum_probs=111.4
Q ss_pred ccCCCCC-CcEEecCCCCeEecccccccCCCcEEEEEEcCCCCH-hhHHHHHHHHHHHHHHhh--CCcEEEEEeCC---C
Q 024977 71 NVGDLLG-DFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCP-CCWELASALKESKARFDS--AGVKLIAVGVG---T 143 (259)
Q Consensus 71 ~vG~~aP-df~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp-~C~~~l~~L~~~~~~~~~--~gv~vv~Vs~~---~ 143 (259)
.+|+.+| +|++.|.+|+.++++++.|+ ++|++||++||| .|..+++.|+++++++++ .++++|+|+.+ +
T Consensus 2 ~~G~~~P~~f~l~d~~G~~v~l~~~~Gk----~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~ 77 (170)
T 3me7_A 2 SLGTYVPGDITLVDSYGNEFQLKNLKGK----PIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDT 77 (170)
T ss_dssp CTTCBCCTTCEEEETTCCEEEGGGGTTS----CEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCC
T ss_pred CCCCcCCCCeEEEcCCcCEEchHHhCCC----EEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCC
Confidence 5899999 99999999999999999874 455566699998 699999999999999975 56999999986 5
Q ss_pred hHHHHHHHhhCCCCCCC--c-c-cC--CchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCc
Q 024977 144 PNKAQILAERLPFPMDC--L-Y-AD--PDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSV 217 (259)
Q Consensus 144 ~~~~~~f~~~~~fp~~~--l-l-~D--~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~ 217 (259)
++.+++|.++.+.++.. + + .| ...+++++||+.... ...+.
T Consensus 78 ~~~~~~~~~~~~~~~~~w~~l~~~~~~~~~~~~~~~g~~~~~---------------------------------~~~~~ 124 (170)
T 3me7_A 78 LEDIKRFQKEYGIDGKGWKVVKAKTSEDLFKLLDAIDFRFMT---------------------------------AGNDF 124 (170)
T ss_dssp HHHHHHHHHHTTCCSSSEEEEEESSHHHHHHHHHHTTCCCEE---------------------------------ETTEE
T ss_pred HHHHHHHHHHcCCCCCCeEEEeCCCHHHHHHHHHHCCeEEec---------------------------------CCCcc
Confidence 77889998855433211 1 2 23 346788888875320 00125
Q ss_pred cccCeEEEEe-CCeEEEEEecCCCCCCCCHHHHHHHhccC
Q 024977 218 LQQGGMFVFK-GKQLLYARKDEGTGDHASLDDVFDICCKV 256 (259)
Q Consensus 218 ~~~gg~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~~~~ 256 (259)
...+.+|||| +|+|++.|... .++.++|++++.+.
T Consensus 125 ~~~~~~~lID~~G~i~~~~~g~----~~~~~~i~~~l~~~ 160 (170)
T 3me7_A 125 IHPNVVVVLSPELQIKDYIYGV----NYNYLEFVNALRLA 160 (170)
T ss_dssp ECCCEEEEECTTSBEEEEEESS----SCCHHHHHHHHHHH
T ss_pred ccCceEEEECCCCeEEEEEeCC----CCCHHHHHHHHHHh
Confidence 6678999999 89999988544 46799998888764
No 62
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.82 E-value=4.4e-20 Score=145.10 Aligned_cols=133 Identities=13% Similarity=0.181 Sum_probs=109.8
Q ss_pred CCcccCCCCCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC-ChHH
Q 024977 68 FPANVGDLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG-TPNK 146 (259)
Q Consensus 68 ~~~~vG~~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~-~~~~ 146 (259)
..+.+|+++|+|++.|.+|+.++++++.++ .+|++||++||+.|+.+++.|+++++++.+.|+.+++|+.+ +.+.
T Consensus 3 ~~~~~G~~~p~~~l~~~~g~~~~l~~~~gk----~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~ 78 (148)
T 3hcz_A 3 APLLLGKKAPNLYMTDTTGTYRYLYDVQAK----YTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEE 78 (148)
T ss_dssp CCCCTTSBCCCCCCBCTTSCBCCGGGCCCS----EEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHH
T ss_pred CccCCCCcCCceEEecCCCCEEEhHHcCCC----EEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHH
Confidence 457899999999999999999999999764 55555569999999999999999999999999999999998 5677
Q ss_pred HHHHHhh--CC-CCCCCcccCCchH--HHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCccccC
Q 024977 147 AQILAER--LP-FPMDCLYADPDRK--VYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSVLQQG 221 (259)
Q Consensus 147 ~~~f~~~--~~-fp~~~ll~D~~~~--~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g 221 (259)
+++|.+. ++ |+ ++.|+++. +.+.||+. ..|
T Consensus 79 ~~~~~~~~~~~~~~---~~~d~~~~~~~~~~~~i~------------------------------------------~~P 113 (148)
T 3hcz_A 79 WLKFIRSKKIGGWL---NVRDSKNHTDFKITYDIY------------------------------------------ATP 113 (148)
T ss_dssp HHHHHHHHTCTTSE---EEECTTCCCCHHHHHCCC------------------------------------------SSC
T ss_pred HHHHHHHcCCCCce---EEeccccchhHHHhcCcC------------------------------------------CCC
Confidence 8888884 45 67 88998877 77777652 145
Q ss_pred eEEEEe-CCeEEEEEecCCCCCCCCHHHHHHHhc
Q 024977 222 GMFVFK-GKQLLYARKDEGTGDHASLDDVFDICC 254 (259)
Q Consensus 222 g~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~~ 254 (259)
..||+| +|+|++.+.+. .+++++++.+.
T Consensus 114 ~~~lid~~G~i~~~~~g~-----~~~~~~l~~l~ 142 (148)
T 3hcz_A 114 VLYVLDKNKVIIAKRIGY-----ENLDDFLVQYE 142 (148)
T ss_dssp EEEEECTTCBEEEESCCG-----GGHHHHHHHHH
T ss_pred EEEEECCCCcEEEecCCH-----HHHHHHHHHHH
Confidence 789998 89999987543 67777777664
No 63
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.82 E-value=2e-19 Score=143.53 Aligned_cols=118 Identities=14% Similarity=0.219 Sum_probs=98.2
Q ss_pred cCCCCCCcEEec--CCCCeEecccccccCCCcEEEEEEcCCCCHhhHHH-HHHHHHHHHHHhhCCcEEEEEeC-------
Q 024977 72 VGDLLGDFSIFT--AAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWEL-ASALKESKARFDSAGVKLIAVGV------- 141 (259)
Q Consensus 72 vG~~aPdf~l~d--~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~-l~~L~~~~~~~~~~gv~vv~Vs~------- 141 (259)
.|+.+|+|++.| .+|+.++++++.|+ ++|++||++||++|..+ ++.|+++++++.+.|+.+|+|+.
T Consensus 2 ~g~~aP~f~l~~~~~~g~~~~l~~~~gk----~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~ 77 (158)
T 3eyt_A 2 NAMKAPELQIQQWFNSATDLTLADLRGK----VIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEA 77 (158)
T ss_dssp CCEECCCCCEEEEESCSSCCCTGGGTTS----EEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGG
T ss_pred CCCcCCCceehhhhcCCCccCHHHhCCC----EEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEeccccccc
Confidence 688999999999 47899999999874 55555569999999997 99999999999988999999995
Q ss_pred CChHHHHHHHh--hCCCCCCCcccCCch-----HHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCC
Q 024977 142 GTPNKAQILAE--RLPFPMDCLYADPDR-----KVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDR 214 (259)
Q Consensus 142 ~~~~~~~~f~~--~~~fp~~~ll~D~~~-----~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~ 214 (259)
++.+.+++|.+ +++|| ++.|.++ ++++.||+.
T Consensus 78 ~~~~~~~~~~~~~~~~~~---~~~d~~~~~~~~~~~~~~~v~-------------------------------------- 116 (158)
T 3eyt_A 78 MTPISLKAFLHEYRIKFP---VGVDQPGDGAMPRTMAAYQMR-------------------------------------- 116 (158)
T ss_dssp SCHHHHHHHHHHTTCCSC---EEEECCCSSSSCHHHHHTTCC--------------------------------------
T ss_pred CCHHHHHHHHHHcCCCce---EEEcCccchhhHHHHHHcCCC--------------------------------------
Confidence 57788999988 56777 8899887 566666652
Q ss_pred CCccccCeEEEEe-CCeEEEEEecC
Q 024977 215 SSVLQQGGMFVFK-GKQLLYARKDE 238 (259)
Q Consensus 215 ~~~~~~gg~fVid-~g~V~y~~~~~ 238 (259)
..|.+|||| +|+|++.+...
T Consensus 117 ----~~P~~~lid~~G~i~~~~~g~ 137 (158)
T 3eyt_A 117 ----GTPSLLLIDKAGDLRAHHFGD 137 (158)
T ss_dssp ----SSSEEEEECTTSEEEEEEESC
T ss_pred ----CCCEEEEECCCCCEEEEEeCC
Confidence 246789999 89999998854
No 64
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.81 E-value=7e-19 Score=139.48 Aligned_cols=129 Identities=18% Similarity=0.280 Sum_probs=105.0
Q ss_pred ccCCCCCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC-ChHHHHH
Q 024977 71 NVGDLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG-TPNKAQI 149 (259)
Q Consensus 71 ~vG~~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~-~~~~~~~ 149 (259)
++|+.+|+|++.|.+|+.++++++.++ ++||. |+++||+.|+.+++.|+++++++.+.++.+++|+.+ +.+.+++
T Consensus 1 ~~G~~~p~~~l~~~~g~~~~l~~~~gk---~vlv~-F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~ 76 (151)
T 2f9s_A 1 SEGSDAPNFVLEDTNGKRIELSDLKGK---GVFLN-FWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHN 76 (151)
T ss_dssp -CCEECCCCEEECTTCCEEEGGGGTTS---EEEEE-EECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHH
T ss_pred CCCCcCCcceeEcCCCCEEEHHHcCCC---EEEEE-EECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHH
Confidence 379999999999999999999999774 55554 559999999999999999999999889999999986 4567888
Q ss_pred HHh--hCCCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCccccCeEEEEe
Q 024977 150 LAE--RLPFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSVLQQGGMFVFK 227 (259)
Q Consensus 150 f~~--~~~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gg~fVid 227 (259)
|.+ +++|| ++.|.++++++.||+. ..|.+||||
T Consensus 77 ~~~~~~~~~~---~~~d~~~~~~~~~~v~------------------------------------------~~P~~~lid 111 (151)
T 2f9s_A 77 FMKSYGVNFP---VVLDTDRQVLDAYDVS------------------------------------------PLPTTFLIN 111 (151)
T ss_dssp HHHHHTCCSC---EEEETTSHHHHHTTCC------------------------------------------SSCEEEEEC
T ss_pred HHHHcCCCce---EEECCchHHHHhcCCC------------------------------------------CCCeEEEEC
Confidence 887 57788 8999999888888762 135789998
Q ss_pred -CCeEEEEEecCCCCCCCCHHHHHHHh
Q 024977 228 -GKQLLYARKDEGTGDHASLDDVFDIC 253 (259)
Q Consensus 228 -~g~V~y~~~~~~~~d~~~~~~iL~a~ 253 (259)
+|+|++.+.+. .+.+++.+.+
T Consensus 112 ~~G~i~~~~~G~-----~~~~~l~~~l 133 (151)
T 2f9s_A 112 PEGKVVKVVTGT-----MTESMIHDYM 133 (151)
T ss_dssp TTSEEEEEEESC-----CCHHHHHHHH
T ss_pred CCCcEEEEEeCC-----CCHHHHHHHH
Confidence 89999988743 2445554444
No 65
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.81 E-value=1e-18 Score=143.18 Aligned_cols=123 Identities=17% Similarity=0.163 Sum_probs=100.7
Q ss_pred CCCCcccCCCCCCcEEecCCC--CeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeC-C
Q 024977 66 TEFPANVGDLLGDFSIFTAAG--EPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGV-G 142 (259)
Q Consensus 66 ~~~~~~vG~~aPdf~l~d~~G--~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~-~ 142 (259)
....+.+|+.+|+|++.|.+| +.++++++.|+ ++||.|| ++|||+|+.+++.|++++++ |+.+|+|+. +
T Consensus 26 ~~~~~~~G~~~P~f~l~~~~g~~~~~~l~~~~gk---~vll~F~-a~~C~~C~~~~~~l~~l~~~----~v~vv~vs~~d 97 (176)
T 3kh7_A 26 ELPSALIGKPFPAFDLPSVQDPARRLTEADLKGK---PALVNVW-GTWCPSCRVEHPELTRLAEQ----GVVIYGINYKD 97 (176)
T ss_dssp GSTTTTTTSBCCCCEEEBSSCTTSEEEGGGGCSS---CEEEEEE-CTTCHHHHHHHHHHHHHHHT----TCEEEEEEESC
T ss_pred cccccccCCcCCCcEecccCCCCceecHHHhCCC---EEEEEEE-CCcCHHHHHHHHHHHHHHHC----CCEEEEEeCCC
Confidence 345678999999999999998 89999999985 5555555 99999999999999998764 899999995 6
Q ss_pred ChHHHHHHHhhCCCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCccccCe
Q 024977 143 TPNKAQILAERLPFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSVLQQGG 222 (259)
Q Consensus 143 ~~~~~~~f~~~~~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gg 222 (259)
+.+..++|.+..++++..++.|+++.+++.||+.. .|.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~------------------------------------------~P~ 135 (176)
T 3kh7_A 98 DNAAAIKWLNELHNPYLLSISDADGTLGLDLGVYG------------------------------------------APE 135 (176)
T ss_dssp CHHHHHHHHHHTTCCCSEEEEETTCHHHHHHTCCS------------------------------------------SCE
T ss_pred CHHHHHHHHHHcCCCCceEEECCcchHHHHcCCCC------------------------------------------CCe
Confidence 67889999985554433358899999998887631 358
Q ss_pred EEEEe-CCeEEEEEecC
Q 024977 223 MFVFK-GKQLLYARKDE 238 (259)
Q Consensus 223 ~fVid-~g~V~y~~~~~ 238 (259)
+|||| +|+|+|.+.+.
T Consensus 136 ~~lid~~G~i~~~~~g~ 152 (176)
T 3kh7_A 136 TYLIDKQGIIRHKIVGV 152 (176)
T ss_dssp EEEECTTCBEEEEEESC
T ss_pred EEEECCCCeEEEEEcCC
Confidence 99999 89999998765
No 66
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=99.81 E-value=3.6e-19 Score=146.95 Aligned_cols=95 Identities=12% Similarity=0.113 Sum_probs=80.1
Q ss_pred CCCcccCCCCCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC----
Q 024977 67 EFPANVGDLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG---- 142 (259)
Q Consensus 67 ~~~~~vG~~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~---- 142 (259)
-..+++|+.+|+|++.|.+|+.++++++.|+ ++|++||++|||+|..+++.|+++++++++.|+++|+|+.+
T Consensus 20 ~~~~~~g~~~p~f~l~~~~G~~v~l~~~~Gk----~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~~~~ 95 (185)
T 2gs3_A 20 FQSMRCARSMHEFSAKDIDGHMVNLDKYRGF----VCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGK 95 (185)
T ss_dssp SGGGGGCCCGGGCEEEBTTSCEEEGGGGTTS----EEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTT
T ss_pred hhhccCCCCcCCceeEcCCCCEeeHHHcCCC----EEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECcccCC
Confidence 3557799999999999999999999999874 56667779999999999999999999999999999999875
Q ss_pred ----ChHHHHHHHh--hCCCCCCCccc--CCchH
Q 024977 143 ----TPNKAQILAE--RLPFPMDCLYA--DPDRK 168 (259)
Q Consensus 143 ----~~~~~~~f~~--~~~fp~~~ll~--D~~~~ 168 (259)
+.+.+++|.+ +++|| ++. |.+++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~p---~~~~~d~~~~ 126 (185)
T 2gs3_A 96 QEPGSNEEIKEFAAGYNVKFD---MFSKICVNGD 126 (185)
T ss_dssp CCCSCHHHHHHHHHHTTCCSE---EBCCCBSSST
T ss_pred CCCCCHHHHHHHHHHcCCCCe---eeeeeccCCh
Confidence 3567888887 46677 776 55543
No 67
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.81 E-value=7.4e-19 Score=144.78 Aligned_cols=100 Identities=16% Similarity=0.238 Sum_probs=87.5
Q ss_pred CCcccCCCCCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeC------
Q 024977 68 FPANVGDLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGV------ 141 (259)
Q Consensus 68 ~~~~vG~~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~------ 141 (259)
..+.+|+.+|+|++.|.+|+.++++++.|+ + +|++|+++||+.|+.+++.|+++++++.+. +++++|+.
T Consensus 5 ~~~~~g~~~p~f~l~~~~G~~~~l~~~~gk---~-vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~v~v~~d~~~~~ 79 (188)
T 2cvb_A 5 PELPLESPLIDAELPDPRGGRYRLSQFHEP---L-LAVVFMCNHCPYVKGSIGELVALAERYRGK-VAFVGINANDYEKY 79 (188)
T ss_dssp CCCCTTCBCCCCEEECTTSCEEEGGGCCSS---E-EEEEEECSSCHHHHTTHHHHHHHHHHTTTT-EEEEEEECCCTTTC
T ss_pred CcCCCCCCCCCceeecCCCCEEeHHHhCCC---E-EEEEEECCCCccHHHHHHHHHHHHHHhhcC-eEEEEEEcCccccc
Confidence 467899999999999999999999999874 4 455555999999999999999999999887 99999998
Q ss_pred --CChHHHHHHHh--hCCCCCCCcccCCchHHHHHhCC
Q 024977 142 --GTPNKAQILAE--RLPFPMDCLYADPDRKVYNLLGL 175 (259)
Q Consensus 142 --~~~~~~~~f~~--~~~fp~~~ll~D~~~~~~~~~Gv 175 (259)
++.+.+++|.+ +++|| ++.|.++++++.||+
T Consensus 80 ~~d~~~~~~~~~~~~~~~~~---~~~d~~~~~~~~~~v 114 (188)
T 2cvb_A 80 PEDAPEKMAAFAEEHGIFFP---YLLDETQEVAKAYRA 114 (188)
T ss_dssp GGGSHHHHHHHHHHHTCCSC---EEECSSSHHHHHTTC
T ss_pred cccCHHHHHHHHHHhCCCce---EEECCcchHHHHcCC
Confidence 56677888887 57788 899999999998876
No 68
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.80 E-value=2.1e-18 Score=138.18 Aligned_cols=138 Identities=14% Similarity=0.171 Sum_probs=107.7
Q ss_pred CCCcccCCCCCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCC-hH
Q 024977 67 EFPANVGDLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGT-PN 145 (259)
Q Consensus 67 ~~~~~vG~~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~-~~ 145 (259)
...+.+|+++|+|++.|.+|+.++++++.++ ++||. |+++||+.|..+++.|+++++++.+.|+.+++|+.++ .+
T Consensus 5 ~~~~~~g~~~p~~~l~~~~g~~~~l~~~~gk---~vlv~-f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~ 80 (165)
T 3or5_A 5 AQADARPTPAPSFSGVTVDGKPFSSASLKGK---AYIVN-FFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLP 80 (165)
T ss_dssp --CCCCCCBCCCCEEECTTSCEEEGGGGTTC---EEEEE-EECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHH
T ss_pred hhhhcCCCCCCCceeeCCCCCEechhHcCCC---EEEEE-EEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHH
Confidence 3456799999999999999999999999874 55554 4599999999999999999999999999999999876 66
Q ss_pred HHHHHHh--hCCCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCccccCeE
Q 024977 146 KAQILAE--RLPFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSVLQQGGM 223 (259)
Q Consensus 146 ~~~~f~~--~~~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gg~ 223 (259)
..++|.+ +++|+ ++.|.+ ++.+.|+.... .+....|.+
T Consensus 81 ~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~------------------------------------~~i~~~P~~ 120 (165)
T 3or5_A 81 NVKNYMKTQGIIYP---VMMATP-ELIRAFNGYID------------------------------------GGITGIPTS 120 (165)
T ss_dssp HHHHHHHHHTCCSC---EEECCH-HHHHHHHTTST------------------------------------TCSCSSSEE
T ss_pred HHHHHHHHcCCCCc---eEecCH-HHHHHHhhhhc------------------------------------cCCCCCCeE
Confidence 7888887 57777 888865 77777764321 013457899
Q ss_pred EEEe-CCeEEEEEecCCCCCCCCHHHHHHHh
Q 024977 224 FVFK-GKQLLYARKDEGTGDHASLDDVFDIC 253 (259)
Q Consensus 224 fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~ 253 (259)
|||| +|+|++.+.+.. +.+++.+.+
T Consensus 121 ~lid~~G~i~~~~~g~~-----~~~~l~~~l 146 (165)
T 3or5_A 121 FVIDASGNVSGVIVGPR-----SKADFDRIV 146 (165)
T ss_dssp EEECTTSBEEEEECSCC-----CHHHHHHHH
T ss_pred EEECCCCcEEEEEcCCC-----CHHHHHHHH
Confidence 9998 899998887543 345544444
No 69
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.80 E-value=4e-19 Score=141.89 Aligned_cols=118 Identities=16% Similarity=0.239 Sum_probs=100.0
Q ss_pred cCCCCCCcEEec-CCCCeEecccccccCCCcEEEEEEcCCCCHhhHHH-HHHHHHHHHHHhhCCcEEEEEeC-------C
Q 024977 72 VGDLLGDFSIFT-AAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWEL-ASALKESKARFDSAGVKLIAVGV-------G 142 (259)
Q Consensus 72 vG~~aPdf~l~d-~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~-l~~L~~~~~~~~~~gv~vv~Vs~-------~ 142 (259)
.|.++|+|++.+ .+|+.++++++.|+ ++|++||++||+.|..+ ++.|+++++++.+.|+.+++|+. +
T Consensus 5 ~g~~~p~~~~~~~~~g~~~~l~~~~gk----~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~ 80 (160)
T 3lor_A 5 DNAPLLELDVQEWVNHEGLSNEDLRGK----VVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVM 80 (160)
T ss_dssp TTCCBCCCCEEEESSSCCCCHHHHTTS----EEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGS
T ss_pred CCCcCCCcccccccCCCccCHHHhCCC----EEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccC
Confidence 688999999999 89999999999874 55556668999999996 99999999999999999999997 6
Q ss_pred ChHHHHHHHh--hCCCCCCCcccCCchH------HHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCC
Q 024977 143 TPNKAQILAE--RLPFPMDCLYADPDRK------VYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDR 214 (259)
Q Consensus 143 ~~~~~~~f~~--~~~fp~~~ll~D~~~~------~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~ 214 (259)
+.+.+++|.+ +++|| ++.|.++. +++.||+.
T Consensus 81 ~~~~~~~~~~~~~~~~~---~~~d~~~~~~~~~~~~~~~~v~-------------------------------------- 119 (160)
T 3lor_A 81 TPEALKVFIDEFGIKFP---VAVDMPREGQRIPSTMKKYRLE-------------------------------------- 119 (160)
T ss_dssp CHHHHHHHHHHTTCCSC---EEEECCCTTCSSCHHHHHTTCC--------------------------------------
T ss_pred CHHHHHHHHHHcCCCCc---EEECCccccchhhhHHHhcccC--------------------------------------
Confidence 7788999988 56677 89998877 77777652
Q ss_pred CCccccCeEEEEe-CCeEEEEEecC
Q 024977 215 SSVLQQGGMFVFK-GKQLLYARKDE 238 (259)
Q Consensus 215 ~~~~~~gg~fVid-~g~V~y~~~~~ 238 (259)
..|.+|||| +|+|++.|.+.
T Consensus 120 ----~~P~~~lid~~G~i~~~~~g~ 140 (160)
T 3lor_A 120 ----GTPSIILADRKGRIRQVQFGQ 140 (160)
T ss_dssp ----SSSEEEEECTTSBEEEEEESC
T ss_pred ----ccceEEEECCCCcEEEEecCc
Confidence 146789999 89999998864
No 70
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.80 E-value=7.8e-19 Score=139.18 Aligned_cols=131 Identities=16% Similarity=0.232 Sum_probs=105.6
Q ss_pred cccCCCCCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeC--CChHHH
Q 024977 70 ANVGDLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGV--GTPNKA 147 (259)
Q Consensus 70 ~~vG~~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~--~~~~~~ 147 (259)
..+|+.+|+|++.|.+|+.++++++.++ ++ |++|+++||+.|..+++.|+++++++.+.|+.+++|+. ++.+.+
T Consensus 2 ~~~G~~~p~~~l~~~~g~~~~l~~~~gk---~~-lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~ 77 (153)
T 2l5o_A 2 SLDSKTAPAFSLPDLHGKTVSNADLQGK---VT-LINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESV 77 (153)
T ss_dssp --CCTTCCSCEEECTTSCEEEHHHHTTC---EE-EEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHH
T ss_pred CCCCCCCCCcEeecCCCCCccHHHhCCC---EE-EEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHH
Confidence 3589999999999999999999999764 45 44555999999999999999999999999999999994 567888
Q ss_pred HHHHhh--CCCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCccccCeEEE
Q 024977 148 QILAER--LPFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSVLQQGGMFV 225 (259)
Q Consensus 148 ~~f~~~--~~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gg~fV 225 (259)
++|.+. ++|+ ++.|.+.++.+.||+. ..|..||
T Consensus 78 ~~~~~~~~~~~~---~~~d~~~~~~~~~~i~------------------------------------------~~P~~~l 112 (153)
T 2l5o_A 78 RQYVKDYGLPFT---VMYDADKAVGQAFGTQ------------------------------------------VYPTSVL 112 (153)
T ss_dssp HHHHHHTTCCSE---EEECSSCHHHHHHTCC------------------------------------------SSSEEEE
T ss_pred HHHHHHcCCCce---EEcCchHHHHHHcCCC------------------------------------------ccCeEEE
Confidence 999884 5566 8899888888888763 1357899
Q ss_pred Ee-CCeEEEEEecCCCCCCCCHHHHHHHhc
Q 024977 226 FK-GKQLLYARKDEGTGDHASLDDVFDICC 254 (259)
Q Consensus 226 id-~g~V~y~~~~~~~~d~~~~~~iL~a~~ 254 (259)
|| +|+|++.+... .+.+++++.+.
T Consensus 113 id~~G~i~~~~~g~-----~~~~~l~~~l~ 137 (153)
T 2l5o_A 113 IGKKGEILKTYVGE-----PDFGKLYQEID 137 (153)
T ss_dssp ECSSSCCCEEEESS-----CCHHHHHHHHH
T ss_pred ECCCCcEEEEEcCC-----CCHHHHHHHHH
Confidence 98 89998888753 55666666553
No 71
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.80 E-value=4.1e-19 Score=143.08 Aligned_cols=93 Identities=12% Similarity=0.220 Sum_probs=76.7
Q ss_pred CcccCCCCCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC------
Q 024977 69 PANVGDLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG------ 142 (259)
Q Consensus 69 ~~~vG~~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~------ 142 (259)
.+++|+.+|+|++.|.+|+.++++++.|+ ++|++||++|||+|..+++.|+++++++.+.|+++|+|+.+
T Consensus 4 ~~~~g~~~p~f~l~~~~G~~~~l~~~~gk----~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~ 79 (169)
T 2v1m_A 4 SHKSWNSIYEFTVKDINGVDVSLEKYRGH----VCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQE 79 (169)
T ss_dssp ---CCCSGGGCEEEBTTSCEEEGGGGTTS----EEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCC
T ss_pred cccCCcccccceeecCCCCCccHHHcCCC----EEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCccCCCC
Confidence 46789999999999999999999999874 55556668999999999999999999999999999999975
Q ss_pred --ChHHHHHH-Hh--hCCCCCCCccc--CCchH
Q 024977 143 --TPNKAQIL-AE--RLPFPMDCLYA--DPDRK 168 (259)
Q Consensus 143 --~~~~~~~f-~~--~~~fp~~~ll~--D~~~~ 168 (259)
+.+.+++| .+ +++|| ++. |.++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~---~~~~~d~~~~ 109 (169)
T 2v1m_A 80 PWAEAEIKKFVTEKYGVQFD---MFSKIKVNGS 109 (169)
T ss_dssp CSCHHHHHHHHHHHHCCCSE---EBCCCCCSST
T ss_pred CCCHHHHHHHHHHhcCCCCc---eEEEEeecCc
Confidence 35678888 46 57777 775 66654
No 72
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.80 E-value=6.4e-19 Score=138.38 Aligned_cols=120 Identities=11% Similarity=0.113 Sum_probs=98.6
Q ss_pred CCcccCCCCCCcEEecCCCCeEecc--cccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHH-hhCCcEEEEEeCCC-
Q 024977 68 FPANVGDLLGDFSIFTAAGEPVLFK--DLWDQNEGVAVVALLRHFGCPCCWELASALKESKARF-DSAGVKLIAVGVGT- 143 (259)
Q Consensus 68 ~~~~vG~~aPdf~l~d~~G~~v~ls--dl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~-~~~gv~vv~Vs~~~- 143 (259)
..+.+|+.+|+|++.+.+|+.++++ ++.++ + +|++||++||+.|+.+++.|.++++++ .+.|+.+++|+.+.
T Consensus 3 ~~~~~g~~~p~~~l~~~~g~~~~l~~~~~~gk---~-vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~ 78 (148)
T 3fkf_A 3 AKVTVGKSAPYFSLPNEKGEKLSRSAERFRNR---Y-LLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDID 78 (148)
T ss_dssp --CCTTSBCCCCCEEBTTSCEECTTSTTTTTS---E-EEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSC
T ss_pred ccccCCCcCCCeEeeCCCCCEEeccccccCCc---E-EEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCC
Confidence 4678999999999999999999999 98764 4 455555999999999999999999999 88899999999885
Q ss_pred hHHHHHHHh--hCCCCCCCcccCC---chHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCcc
Q 024977 144 PNKAQILAE--RLPFPMDCLYADP---DRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSVL 218 (259)
Q Consensus 144 ~~~~~~f~~--~~~fp~~~ll~D~---~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~ 218 (259)
.+..++|.+ +++|+ ++.|. +..+.+.||+.
T Consensus 79 ~~~~~~~~~~~~~~~~---~~~d~~~~~~~~~~~~~v~------------------------------------------ 113 (148)
T 3fkf_A 79 REAWETAIKKDTLSWD---QVCDFTGLSSETAKQYAIL------------------------------------------ 113 (148)
T ss_dssp HHHHHHHHHHTTCCSE---EECCSCGGGCHHHHHTTCC------------------------------------------
T ss_pred HHHHHHHHHHcCCCce---EEEccCCcchHHHHhcCCC------------------------------------------
Confidence 456788877 56677 88888 56777777652
Q ss_pred ccCeEEEEe-CCeEEEEEe
Q 024977 219 QQGGMFVFK-GKQLLYARK 236 (259)
Q Consensus 219 ~~gg~fVid-~g~V~y~~~ 236 (259)
..|.+|||| +|+|++.+.
T Consensus 114 ~~P~~~lid~~G~i~~~~~ 132 (148)
T 3fkf_A 114 TLPTNILLSPTGKILARDI 132 (148)
T ss_dssp SSSEEEEECTTSBEEEESC
T ss_pred CcCEEEEECCCCeEEEecC
Confidence 246789998 899999876
No 73
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.80 E-value=3.6e-19 Score=146.46 Aligned_cols=91 Identities=12% Similarity=0.173 Sum_probs=73.3
Q ss_pred CCCcccCCCCCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC----
Q 024977 67 EFPANVGDLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG---- 142 (259)
Q Consensus 67 ~~~~~vG~~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~---- 142 (259)
...+++|+.+|+|++.|.+|+.++++++.| +++|++||++|||+|..+++.|+++++++++.|+++++|+.+
T Consensus 20 ~~~~~~g~~~p~f~l~~~~G~~~~l~~~~G----k~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~ 95 (181)
T 2p31_A 20 FQSMQQEQDFYDFKAVNIRGKLVSLEKYRG----SVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQ 95 (181)
T ss_dssp -------CCGGGCEEEBTTSCEEEGGGGTT----SEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTT
T ss_pred cCcCCcCCccCceEeecCCCCEecHHHcCC----CEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCC
Confidence 356789999999999999999999999987 466667779999999999999999999999999999999975
Q ss_pred ----ChHHHHHHHh---hCCCCCCCcccC
Q 024977 143 ----TPNKAQILAE---RLPFPMDCLYAD 164 (259)
Q Consensus 143 ----~~~~~~~f~~---~~~fp~~~ll~D 164 (259)
+.+.+++|.+ +++|| ++.|
T Consensus 96 ~e~~~~~~~~~~~~~~~~~~~p---~~~~ 121 (181)
T 2p31_A 96 QEPDSNKEIESFARRTYSVSFP---MFSK 121 (181)
T ss_dssp CCCSCHHHHHHHHHHHHCCCSC---BBCC
T ss_pred CCCCCHHHHHHHHHhhcCCCce---eEee
Confidence 4677888876 35677 7753
No 74
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.79 E-value=1.8e-19 Score=145.64 Aligned_cols=149 Identities=20% Similarity=0.239 Sum_probs=115.8
Q ss_pred CcccCCCCCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHh-hHHHHHHHHHHHHHHhhC---CcEEEEEeCC--
Q 024977 69 PANVGDLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPC-CWELASALKESKARFDSA---GVKLIAVGVG-- 142 (259)
Q Consensus 69 ~~~vG~~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~-C~~~l~~L~~~~~~~~~~---gv~vv~Vs~~-- 142 (259)
...+|+.+|+|++.|.+| .++++++.|+ ++|++||++||+. |+.+++.|+++++++++. ++++|+|+.+
T Consensus 9 ~~~~G~~~p~f~l~~~~g-~~~l~~~~gk----~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~ 83 (172)
T 2k6v_A 9 TRLLNPKPVDFALEGPQG-PVRLSQFQDK----VVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPE 83 (172)
T ss_dssp EEEEEEEECCCEEECSSS-EEEGGGSTTS----EEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTT
T ss_pred ccccCCCCCCeEEEcCCC-CCcHHHhCCC----EEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCC
Confidence 344789999999999999 9999999764 5666667999996 999999999999999875 7999999975
Q ss_pred --ChHHHHHHHh--hCCCCCCCcccCCc---hHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCC
Q 024977 143 --TPNKAQILAE--RLPFPMDCLYADPD---RKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRS 215 (259)
Q Consensus 143 --~~~~~~~f~~--~~~fp~~~ll~D~~---~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~ 215 (259)
+++.+++|.+ +.+|+ +++|++ ++++++||+..... +.. ....-
T Consensus 84 ~d~~~~~~~~~~~~~~~~~---~l~d~~~~~~~~~~~~gv~~~~~-----~~~----------------------~~~~~ 133 (172)
T 2k6v_A 84 RDPPEVADRYAKAFHPSFL---GLSGSPEAVREAAQTFGVFYQKS-----QYR----------------------GPGEY 133 (172)
T ss_dssp TCCHHHHHHHHHHHCTTEE---EECCCHHHHHHHHHHHTCCEEEE-----EEE----------------------ETTEE
T ss_pred CCCHHHHHHHHHHhCCCcE---EEeCCHHHHHHHHHhcCeEEEec-----cCC----------------------CCCCc
Confidence 4678899988 56777 899988 68999999864311 000 00000
Q ss_pred CccccCeEEEEeCCeEEEEEecCCCCCCCCHHHHHHHhcc
Q 024977 216 SVLQQGGMFVFKGKQLLYARKDEGTGDHASLDDVFDICCK 255 (259)
Q Consensus 216 ~~~~~gg~fVid~g~V~y~~~~~~~~d~~~~~~iL~a~~~ 255 (259)
+....|.+||||+|+|++.|.... .++.++|++.+++
T Consensus 134 ~i~~~P~~~lid~G~i~~~~~g~~---~~~~~~l~~~l~~ 170 (172)
T 2k6v_A 134 LVDHTATTFVVKEGRLVLLYSPDK---AEATDRVVADLQA 170 (172)
T ss_dssp EEEECCCEEEEETTEEEEEECHHH---HTCHHHHHHHHHH
T ss_pred eEecCCEEEEEECCEEEEEECCCC---CCCHHHHHHHHHH
Confidence 145688999999889999987654 4578888887764
No 75
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.79 E-value=2.4e-18 Score=134.42 Aligned_cols=133 Identities=14% Similarity=0.203 Sum_probs=103.7
Q ss_pred CCCCcccCCCCCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC---
Q 024977 66 TEFPANVGDLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG--- 142 (259)
Q Consensus 66 ~~~~~~vG~~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~--- 142 (259)
....+.+|+.+|+|++.|.+|+.+++++ .++ ++||.|| ++||+.|+.+++.|+++++++.+.++.++.|+.+
T Consensus 5 ~~~~~~~g~~~p~~~l~~~~g~~~~l~~-~gk---~~ll~f~-~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~ 79 (145)
T 3erw_A 5 AQAEEKQPAVPAVFLMKTIEGEDISIPN-KGQ---KTILHFW-TSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSE 79 (145)
T ss_dssp -------CCSCCEEEEECTTSCEEEESC-TTS---EEEEEEE-CSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGS
T ss_pred ccccccCCCcCCCceeecCCCCEEeHHH-CCC---EEEEEEE-CCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCc
Confidence 3456779999999999999999999999 653 5555555 9999999999999999999998789999999985
Q ss_pred -ChHHHHHHHh--hCCCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCccc
Q 024977 143 -TPNKAQILAE--RLPFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSVLQ 219 (259)
Q Consensus 143 -~~~~~~~f~~--~~~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 219 (259)
+.+.+++|.+ +++|+ ++.|.++.+++.||+. .
T Consensus 80 ~~~~~~~~~~~~~~~~~~---~~~d~~~~~~~~~~v~------------------------------------------~ 114 (145)
T 3erw_A 80 QNQQVVEDFIKANKLTFP---IVLDSKGELMKEYHII------------------------------------------T 114 (145)
T ss_dssp SCHHHHHHHHHHTTCCSC---EEECSSSHHHHHTTCC------------------------------------------E
T ss_pred CCHHHHHHHHHHcCCcee---EEEcCchhHHHhcCcC------------------------------------------c
Confidence 6677888887 56777 8999999998888763 1
Q ss_pred cCeEEEEe-CCeEEEEEecCCCCCCCCHHHHHHHh
Q 024977 220 QGGMFVFK-GKQLLYARKDEGTGDHASLDDVFDIC 253 (259)
Q Consensus 220 ~gg~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~ 253 (259)
.|..||+| +|+|++.+.+. .+.+++.+.+
T Consensus 115 ~P~~~lid~~G~i~~~~~g~-----~~~~~l~~~l 144 (145)
T 3erw_A 115 IPTSFLLNEKGEIEKTKIGP-----MTAEQLKEWT 144 (145)
T ss_dssp ESEEEEECTTCCEEEEEESC-----CCHHHHHHHH
T ss_pred cCeEEEEcCCCcEEEEEcCC-----cCHHHHHHhh
Confidence 45789998 89999988753 3556666554
No 76
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.79 E-value=1.3e-18 Score=140.22 Aligned_cols=94 Identities=12% Similarity=0.207 Sum_probs=75.3
Q ss_pred CCcccCCCCCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC-----
Q 024977 68 FPANVGDLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG----- 142 (259)
Q Consensus 68 ~~~~vG~~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~----- 142 (259)
..+++|+.+|+|++.|.+|+.++++++.|+ ++|++||++||+.|..+++.|+++++++++.|+++|+|+.+
T Consensus 4 ~~~~~g~~~p~f~l~~~~g~~~~l~~~~gk----~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~ 79 (170)
T 2p5q_A 4 QTSKNPESVHDFTVKDAKENDVDLSIFKGK----VLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEE 79 (170)
T ss_dssp ------CCGGGCEEEBTTSCEEEGGGGTTS----EEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTC
T ss_pred CcCCCCccccceEEEcCCCCEecHHHhCCC----EEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCC
Confidence 456789999999999999999999999874 55556668999999999999999999999999999999975
Q ss_pred ---ChHHHHHHHh---hCCCCCCCcc--cCCchH
Q 024977 143 ---TPNKAQILAE---RLPFPMDCLY--ADPDRK 168 (259)
Q Consensus 143 ---~~~~~~~f~~---~~~fp~~~ll--~D~~~~ 168 (259)
+.+.+++|.+ +++|| ++ .|+++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~---~~~~~d~~~~ 110 (170)
T 2p5q_A 80 EPGTNDQITDFVCTRFKSEFP---IFDKIDVNGE 110 (170)
T ss_dssp CCSCHHHHHHHHHHHTCCCSC---BBCCCBSSST
T ss_pred CCCCHHHHHHHHHHhcCCCce---eEeeeccCCC
Confidence 5677888877 45677 67 576654
No 77
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.78 E-value=1.1e-18 Score=144.56 Aligned_cols=93 Identities=12% Similarity=0.171 Sum_probs=77.6
Q ss_pred CcccCCCCCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC------
Q 024977 69 PANVGDLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG------ 142 (259)
Q Consensus 69 ~~~vG~~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~------ 142 (259)
.++.|+.+|+|++.|.+|+.++++++.|+ + +|++||++|||+|+.+++.|+++++++++.|+++|+|+.+
T Consensus 21 ~~~~~~~~p~f~l~~~~G~~~~l~~~~Gk---~-vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~ 96 (190)
T 2vup_A 21 HMSAASSIFDFEVLDADHKPYNLVQHKGS---P-LLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQE 96 (190)
T ss_dssp ---CCCSGGGSCCBBTTSSBCCGGGGTTS---C-EEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCC
T ss_pred cCCCCCcccCeEEEcCCCCEEEHHHcCCC---E-EEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCC
Confidence 46789999999999999999999999874 4 5555569999999999999999999999999999999987
Q ss_pred --ChHHHHHHH-h--hCCCCCCCccc--CCchH
Q 024977 143 --TPNKAQILA-E--RLPFPMDCLYA--DPDRK 168 (259)
Q Consensus 143 --~~~~~~~f~-~--~~~fp~~~ll~--D~~~~ 168 (259)
+.+.+++|. + +++|| ++. |.++.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~p---~l~~~D~~~~ 126 (190)
T 2vup_A 97 PGNEEEIKEFVCTKFKAEFP---IMAKINVNGE 126 (190)
T ss_dssp CSCHHHHHHHHHHHHCCCSC---BBCCCBSSST
T ss_pred CCCHHHHHHHHHHhcCCCeE---EEeecccCcc
Confidence 577888998 6 57788 776 55544
No 78
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.78 E-value=3.2e-19 Score=147.60 Aligned_cols=91 Identities=12% Similarity=0.154 Sum_probs=76.0
Q ss_pred CCCCcccCCCCCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC---
Q 024977 66 TEFPANVGDLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG--- 142 (259)
Q Consensus 66 ~~~~~~vG~~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~--- 142 (259)
....+..+..+|+|++.|.+|+.++++++.|+ +||++||++|||+|..+++.|+++++++++.|+++|+|+.+
T Consensus 16 ~~~~~~~~~~~p~f~l~d~~G~~~~l~~~~Gk----~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~ 91 (187)
T 3dwv_A 16 SRKKMSAASSIFDFEVLDADHKPYNLVQHKGS----PLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFG 91 (187)
T ss_dssp ----CTTCCSGGGSCCBBTTSCBCCGGGGTTS----CEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCS
T ss_pred hhhhhcCCCccCCeEEEcCCCCEeeHHHhCCC----EEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccC
Confidence 34556788999999999999999999999874 56666679999999999999999999999999999999975
Q ss_pred -----ChHHHHHHHh---hCCCCCCCccc
Q 024977 143 -----TPNKAQILAE---RLPFPMDCLYA 163 (259)
Q Consensus 143 -----~~~~~~~f~~---~~~fp~~~ll~ 163 (259)
+.+.+++|.+ +++|| ++.
T Consensus 92 ~~e~~~~~~~~~~~~~~~~~~~p---~~~ 117 (187)
T 3dwv_A 92 GQEPGNEEEIKEFVCTKFKAEFP---IMA 117 (187)
T ss_dssp SCSSSBTTHHHHSCCBCCCCSSC---BBC
T ss_pred CCCCCCHHHHHHHHHhccCCCCc---eee
Confidence 4677888887 46777 776
No 79
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.77 E-value=3.9e-18 Score=135.45 Aligned_cols=130 Identities=18% Similarity=0.223 Sum_probs=105.0
Q ss_pred CCcccCCCCCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeC---CCh
Q 024977 68 FPANVGDLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGV---GTP 144 (259)
Q Consensus 68 ~~~~vG~~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~---~~~ 144 (259)
..+.+|+.+|+|++.|.+|+.++++++. + ++||.|| ++||+.|..+++.|+++++++ ++++++|+. ++.
T Consensus 3 ~~l~~g~~~p~f~l~~~~g~~~~l~~~~-k---~vll~f~-~~~C~~C~~~~~~l~~l~~~~---~v~~v~v~~d~~~~~ 74 (154)
T 3ia1_A 3 LAVKPGEPLPDFLLLDPKGQPVTPATVS-K---PAVIVFW-ASWCTVCKAEFPGLHRVAEET---GVPFYVISREPRDTR 74 (154)
T ss_dssp -CCCSBEECCCCCEECTTSCEECTTTSC-S---SEEEEEE-CTTCHHHHHHHHHHHHHHHHH---CCCEEEEECCTTCCH
T ss_pred ccCCCCCcCCceEEECCCCCEechHHcC-C---eEEEEEE-cccChhHHHHHHHHHHHHHHc---CCeEEEEeCCCcccH
Confidence 3678999999999999999999999987 6 6666666 999999999999999999988 899999999 677
Q ss_pred HHHHHHHhh--CCCCCCCcccC---CchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCccc
Q 024977 145 NKAQILAER--LPFPMDCLYAD---PDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSVLQ 219 (259)
Q Consensus 145 ~~~~~f~~~--~~fp~~~ll~D---~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 219 (259)
+.+++|.+. ++|| ++.| .+..+++.||+. .
T Consensus 75 ~~~~~~~~~~~~~~~---~~~d~~~~~~~~~~~~~v~------------------------------------------~ 109 (154)
T 3ia1_A 75 EVVLEYMKTYPRFIP---LLASDRDRPHEVAARFKVL------------------------------------------G 109 (154)
T ss_dssp HHHHHHHTTCTTEEE---CBCCSSCCHHHHHTTSSBC------------------------------------------S
T ss_pred HHHHHHHHHcCCCcc---cccccccchHHHHHHhCCC------------------------------------------c
Confidence 888999884 5666 7887 556666655542 2
Q ss_pred cCeEEEEe-CCeEEEEEecCCCCCCCCHHHHHHHhcc
Q 024977 220 QGGMFVFK-GKQLLYARKDEGTGDHASLDDVFDICCK 255 (259)
Q Consensus 220 ~gg~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~~~ 255 (259)
.|.+|||| +|+|++.+.+. .+.+++.+.+.+
T Consensus 110 ~P~~~lid~~G~i~~~~~g~-----~~~~~l~~~l~~ 141 (154)
T 3ia1_A 110 QPWTFVVDREGKVVALFAGR-----AGREALLDALLL 141 (154)
T ss_dssp SCEEEEECTTSEEEEEEESB-----CCHHHHHHHHHH
T ss_pred ccEEEEECCCCCEEEEEcCC-----CCHHHHHHHHHh
Confidence 56899998 89999988743 456677666654
No 80
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=99.63 E-value=2.5e-20 Score=149.36 Aligned_cols=138 Identities=16% Similarity=0.292 Sum_probs=109.7
Q ss_pred CCcccCCCCCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHH-HHHHHh-hCCcEEEEEeCCCh-
Q 024977 68 FPANVGDLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKE-SKARFD-SAGVKLIAVGVGTP- 144 (259)
Q Consensus 68 ~~~~vG~~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~-~~~~~~-~~gv~vv~Vs~~~~- 144 (259)
..+.+|+.+|+|++.|.+|+.++++++.++ + +|++||++||+.|+.+++.|++ ++.+++ +.++.+++|+.++.
T Consensus 5 ~~l~~g~~~p~f~l~~~~g~~~~l~~~~gk---~-vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~ 80 (159)
T 2ls5_A 5 YIVRIGEMAPDFTITLTDGKQVTLSSLRGK---V-VMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPL 80 (159)
Confidence 457899999999999999999999999774 4 5555569999999999999998 888887 78999999998864
Q ss_pred HHHHHHHh--hCCCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCccccCe
Q 024977 145 NKAQILAE--RLPFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSVLQQGG 222 (259)
Q Consensus 145 ~~~~~f~~--~~~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gg 222 (259)
+..++|.+ +++|| ++.|+++++++.||+.. ...|.
T Consensus 81 ~~~~~~~~~~~~~~~---~~~d~~~~~~~~~~~~~----------------------------------------~~~P~ 117 (159)
T 2ls5_A 81 EKVLAFAKSTGVTYP---LGLDPGADIFAKYALRD----------------------------------------AGITR 117 (159)
Confidence 55778877 56788 89999998888887631 11356
Q ss_pred EEEEe-CCeEEEEEecCCCCCCCCHHHHHHHhcc
Q 024977 223 MFVFK-GKQLLYARKDEGTGDHASLDDVFDICCK 255 (259)
Q Consensus 223 ~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~~~ 255 (259)
+|||| +|+|++.+... +..+++++++.+.+
T Consensus 118 ~~lid~~G~i~~~~~g~---~~~~l~~~l~~l~~ 148 (159)
T 2ls5_A 118 NVLIDREGKIVKLTRLY---NEEEFASLVQQINE 148 (159)
Confidence 88998 89999988753 33466666666543
No 81
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.77 E-value=6.4e-18 Score=135.39 Aligned_cols=142 Identities=17% Similarity=0.184 Sum_probs=106.0
Q ss_pred CCCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHh-hHHHHHHHHHHHHHHhh----CCcEEEEEeCCC----hH
Q 024977 75 LLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPC-CWELASALKESKARFDS----AGVKLIAVGVGT----PN 145 (259)
Q Consensus 75 ~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~-C~~~l~~L~~~~~~~~~----~gv~vv~Vs~~~----~~ 145 (259)
.+|+|++.|.+|+.++++++.|+ ++|++||++||+. |..+++.|+++++++++ .++++|+|+.+. ++
T Consensus 2 ~ap~f~l~~~~G~~~~l~~~~gk----~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~ 77 (164)
T 2ggt_A 2 LGGPFSLTTHTGERKTDKDYLGQ----WLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKE 77 (164)
T ss_dssp CCCCCEEEETTSCEEEGGGGTTC----EEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHH
T ss_pred CCCCeEEEeCCCCEEeHHHcCCC----EEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHH
Confidence 47999999999999999999874 5555666899997 99999999999999987 499999999875 67
Q ss_pred HHHHHHhh--CCCCCCCcc---cCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCcccc
Q 024977 146 KAQILAER--LPFPMDCLY---ADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSVLQQ 220 (259)
Q Consensus 146 ~~~~f~~~--~~fp~~~ll---~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 220 (259)
.+++|.+. .+|+ ++ .|..++++++||+...+. +. . .+..-...+.
T Consensus 78 ~~~~~~~~~~~~~~---~l~~~~d~~~~~~~~~~v~~~p~-----~~----------------~------~~~~~~~~~~ 127 (164)
T 2ggt_A 78 AIANYVKEFSPKLV---GLTGTREEVDQVARAYRVYYSPG-----PK----------------D------EDEDYIVDHT 127 (164)
T ss_dssp HHHHHHHTTCSSCE---EEECCHHHHHHHHHTTTCCEEEE-----EE----------------C------TTSCEEEEEC
T ss_pred HHHHHHHHcCCCeE---EEeCCHHHHHHHHHhcCeEEEec-----CC----------------C------CCCCeeEecc
Confidence 78999884 5566 56 466778999999864210 00 0 0000014556
Q ss_pred CeEEEEe-CCeEEEEEecCCCCCCCCHHHHHHHhcc
Q 024977 221 GGMFVFK-GKQLLYARKDEGTGDHASLDDVFDICCK 255 (259)
Q Consensus 221 gg~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~~~ 255 (259)
+.+|||| +|+|++.+... .+.++|.+.+++
T Consensus 128 ~~~~lid~~G~i~~~~~g~-----~~~~~l~~~l~~ 158 (164)
T 2ggt_A 128 IIMYLIGPDGEFLDYFGQN-----KRKGEIAASIAT 158 (164)
T ss_dssp CEEEEECTTSCEEEEEETT-----CCHHHHHHHHHH
T ss_pred ceEEEECCCCeEEEEeCCC-----CCHHHHHHHHHH
Confidence 7899999 89999988643 346777666543
No 82
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=99.76 E-value=3e-18 Score=140.69 Aligned_cols=89 Identities=15% Similarity=0.198 Sum_probs=76.9
Q ss_pred cccCCCCCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC-------
Q 024977 70 ANVGDLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG------- 142 (259)
Q Consensus 70 ~~vG~~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~------- 142 (259)
-..|+.+|+|++.|.+|+.++++++.| ++||++||++|||+|..+++.|+++++++++.|+++|+|+.+
T Consensus 12 ~~~~~~~p~f~l~d~~G~~v~l~~~~G----k~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~ 87 (180)
T 3kij_A 12 KPKINSFYAFEVKDAKGRTVSLEKYKG----KVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEP 87 (180)
T ss_dssp CCCCCCGGGCEEEBTTSCEEEGGGGTT----SEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCCC
T ss_pred cCCcCcccceEEecCCCCEecHHHcCC----CEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCccccCCC
Confidence 347889999999999999999999987 477778889999999999999999999999999999999854
Q ss_pred -ChHHHHHHHhh---CCCCCCCcccCC
Q 024977 143 -TPNKAQILAER---LPFPMDCLYADP 165 (259)
Q Consensus 143 -~~~~~~~f~~~---~~fp~~~ll~D~ 165 (259)
+.+.+++|.+. ++|| ++.|.
T Consensus 88 d~~~~~~~~~~~~~~~~~~---~~~~~ 111 (180)
T 3kij_A 88 RPSKEVESFARKNYGVTFP---IFHKI 111 (180)
T ss_dssp SCHHHHHHHHHHHHCCCSC---BBCCC
T ss_pred CCHHHHHHHHHHhcCCCCc---eeeee
Confidence 67788888874 5666 66643
No 83
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.76 E-value=2.6e-17 Score=132.88 Aligned_cols=139 Identities=14% Similarity=0.191 Sum_probs=104.8
Q ss_pred CCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHh-hHHHHHHHHHHHHHHhh----CCcEEEEEeCC----ChHHH
Q 024977 77 GDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPC-CWELASALKESKARFDS----AGVKLIAVGVG----TPNKA 147 (259)
Q Consensus 77 Pdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~-C~~~l~~L~~~~~~~~~----~gv~vv~Vs~~----~~~~~ 147 (259)
|+|++.|.+|+.++++++.|+ ++|++||++||+. |..+++.|+++++++++ .++++|+|+.+ +++.+
T Consensus 7 p~f~l~~~~G~~~~l~~~~gk----~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~ 82 (171)
T 2rli_A 7 GDFHLLDHRGRARCKADFRGQ----WVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAM 82 (171)
T ss_dssp SCCEEEETTSCEEETTTTTTS----EEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHH
T ss_pred CCeEEEeCCCCEEeHHHhCCC----EEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHH
Confidence 899999999999999999874 5666777999997 99999999999999976 59999999987 46788
Q ss_pred HHHHhh--CCCCCCCcccCCc---hHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCccccCe
Q 024977 148 QILAER--LPFPMDCLYADPD---RKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSVLQQGG 222 (259)
Q Consensus 148 ~~f~~~--~~fp~~~ll~D~~---~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gg 222 (259)
++|.+. .+|+ ++.|.. +.++++||+..... +.. ....-.....+.
T Consensus 83 ~~~~~~~~~~~~---~l~~~~~~~~~~~~~~~v~~~p~-----~~~----------------------~~~~~~~~~~~~ 132 (171)
T 2rli_A 83 ARYVQDFHPRLL---GLTGSTKQVAQASHSYRVYYNAG-----PKD----------------------EDQDYIVDHSIA 132 (171)
T ss_dssp HHHHHTTCTTCC---EEECCHHHHHHHHHHSCCCCEEC-----CCC----------------------SSCCCCEECCCE
T ss_pred HHHHHHcCCCeE---EEeCCHHHHHHHHHHhCeEEEec-----CCC----------------------CCCCeEEeccce
Confidence 999884 5666 677643 57899999864211 000 000001456789
Q ss_pred EEEEe-CCeEEEEEecCCCCCCCCHHHHHHHhc
Q 024977 223 MFVFK-GKQLLYARKDEGTGDHASLDDVFDICC 254 (259)
Q Consensus 223 ~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~~ 254 (259)
+|||| +|+|++.|... .+.++|.+.+.
T Consensus 133 ~~lid~~G~i~~~~~g~-----~~~~~l~~~l~ 160 (171)
T 2rli_A 133 IYLLNPDGLFTDYYGRS-----RSAEQISDSVR 160 (171)
T ss_dssp EEEECTTSCEEEEEESS-----CCHHHHHHHHH
T ss_pred EEEECCCCeEEEEECCC-----CCHHHHHHHHH
Confidence 99999 89999998753 34566665554
No 84
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.76 E-value=3.9e-18 Score=134.95 Aligned_cols=137 Identities=13% Similarity=0.163 Sum_probs=105.3
Q ss_pred CcccCCCCC-CcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCCh-HH
Q 024977 69 PANVGDLLG-DFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTP-NK 146 (259)
Q Consensus 69 ~~~vG~~aP-df~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~-~~ 146 (259)
.+.+|+.+| +|++.|.+|+.++++++.++ + +|++|++.||+.|+.+++.|+++++++.+.++.+++|+.+.. +.
T Consensus 2 ~l~~G~~~p~~f~l~~~~g~~~~l~~~~gk---~-~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~ 77 (152)
T 2lja_A 2 SLRSGNPSAASFSYPDINGKTVSLADLKGK---Y-IYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKA 77 (152)
T ss_dssp CTTTTCCCSSSCEEEETTTEEEESTTTTTS---E-EEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHH
T ss_pred ccccCCCCCcccEeecCCCCEeeHHHcCCC---E-EEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHH
Confidence 467999999 99999999999999999774 4 555556999999999999999999999888999999998864 56
Q ss_pred HHHHHhhCCCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCccccCeEEEE
Q 024977 147 AQILAERLPFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSVLQQGGMFVF 226 (259)
Q Consensus 147 ~~~f~~~~~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gg~fVi 226 (259)
+++|.++.+++...++.|++.++.+.||+. ..|.+||+
T Consensus 78 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~------------------------------------------~~P~~~li 115 (152)
T 2lja_A 78 WENMVTKDQLKGIQLHMGTDRTFMDAYLIN------------------------------------------GIPRFILL 115 (152)
T ss_dssp HHHHHHHHTCCSEEEECSSCTHHHHHTTCC------------------------------------------SSCCEEEE
T ss_pred HHHHHHhcCCCCceeecCcchhHHHHcCcC------------------------------------------CCCEEEEE
Confidence 788877433332227888888888888763 13468999
Q ss_pred e-CCeEEEEEecCCCCCCCCHHHHHHHh
Q 024977 227 K-GKQLLYARKDEGTGDHASLDDVFDIC 253 (259)
Q Consensus 227 d-~g~V~y~~~~~~~~d~~~~~~iL~a~ 253 (259)
| +|+|++.+.. ..+..+++++|+.+
T Consensus 116 d~~G~i~~~~~g--~~~~~~l~~~l~~~ 141 (152)
T 2lja_A 116 DRDGKIISANMT--RPSDPKTAEKFNEL 141 (152)
T ss_dssp CTTSCEEESSCC--CTTCHHHHHHHHHH
T ss_pred CCCCeEEEccCC--CCCHHHHHHHHHHH
Confidence 9 8999987543 23333455555444
No 85
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.76 E-value=9.5e-18 Score=131.42 Aligned_cols=119 Identities=15% Similarity=0.252 Sum_probs=99.2
Q ss_pred cccCCCCCCcEE--ecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC-----
Q 024977 70 ANVGDLLGDFSI--FTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG----- 142 (259)
Q Consensus 70 ~~vG~~aPdf~l--~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~----- 142 (259)
+.+|+.+|+|++ .+.+|+.++++++.++ ++||.| +++||+.|+.+++.|+++++++.+. +.+++|+.+
T Consensus 1 l~~g~~~P~f~~~~~~~~g~~~~~~~~~gk---~~lv~f-~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~~v~~~~~~~~ 75 (148)
T 2b5x_A 1 MKLRQPMPELTGEKAWLNGEVTREQLIGEK---PTLIHF-WSISCHLCKEAMPQVNEFRDKYQDQ-LNVVAVHMPRSEDD 75 (148)
T ss_dssp CCTTCBCCCCCCCSEEESCCCCHHHHTTTS---CEEEEE-ECTTCHHHHHHHHHHHHHHHHHTTT-SEEEEEECCCSTTT
T ss_pred CCCCCCCCCCccccccccCcccchhhcCCC---EEEEEE-EcCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEEcCCCccc
Confidence 468999999999 6789999999999774 555555 5899999999999999999999776 999999976
Q ss_pred -ChHHHHHHHh--hCCCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCccc
Q 024977 143 -TPNKAQILAE--RLPFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSVLQ 219 (259)
Q Consensus 143 -~~~~~~~f~~--~~~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 219 (259)
+.+.+++|.+ +++|| ++.|.+.++.+.||+..
T Consensus 76 ~~~~~~~~~~~~~~~~~~---~~~d~~~~~~~~~~v~~------------------------------------------ 110 (148)
T 2b5x_A 76 LDPGKIKETAAEHDITQP---IFVDSDHALTDAFENEY------------------------------------------ 110 (148)
T ss_dssp SSHHHHHHHHHHTTCCSC---EEECSSCHHHHHTCCCC------------------------------------------
T ss_pred cCHHHHHHHHHHcCCCcc---eEECCchhHHHHhCCCC------------------------------------------
Confidence 5677888887 56777 88999999888887631
Q ss_pred cCeEEEEe-CCeEEEEEecC
Q 024977 220 QGGMFVFK-GKQLLYARKDE 238 (259)
Q Consensus 220 ~gg~fVid-~g~V~y~~~~~ 238 (259)
.|..||+| +|+|++.+...
T Consensus 111 ~P~~~lid~~G~i~~~~~g~ 130 (148)
T 2b5x_A 111 VPAYYVFDKTGQLRHFQAGG 130 (148)
T ss_dssp SSEEEEECTTCBEEEEEESC
T ss_pred CCEEEEECCCCcEEEEecCC
Confidence 35789998 89999988764
No 86
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=99.76 E-value=2e-17 Score=140.68 Aligned_cols=87 Identities=11% Similarity=0.119 Sum_probs=74.6
Q ss_pred ccCCCCCCcEEecCC-CCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC-------
Q 024977 71 NVGDLLGDFSIFTAA-GEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG------- 142 (259)
Q Consensus 71 ~vG~~aPdf~l~d~~-G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~------- 142 (259)
..+..+|+|++.|.+ |+.++|++++|+ +||++||++||++|+ +++.|+++++++++.|++||+|+.+
T Consensus 30 ~~~~~~pdF~l~d~~~G~~v~Lsd~~GK----vvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d~f~~~e~ 104 (215)
T 2i3y_A 30 DEKGTIYDYEAIALNKNEYVSFKQYVGK----HILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGFPCNQFGKQEP 104 (215)
T ss_dssp CCCCCGGGCEEEBSSSSCEEEGGGGTTS----EEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECCCSTTCCC
T ss_pred cccCCcCCcEeeeCCCCCEEcHHHhCCC----EEEEEEeCCCCCChH-hHHHHHHHHHHhccCCeEEEEEEccccCcCCC
Confidence 456779999999999 999999999874 677777899999999 9999999999999999999999854
Q ss_pred -ChHHHHHHHh------h--CCCCCCCcccCC
Q 024977 143 -TPNKAQILAE------R--LPFPMDCLYADP 165 (259)
Q Consensus 143 -~~~~~~~f~~------~--~~fp~~~ll~D~ 165 (259)
+.+.+++|++ + ++|| +++|.
T Consensus 105 ~~~~~i~~f~~~~~~~~~~~~~fp---ll~d~ 133 (215)
T 2i3y_A 105 GDNKEILPGLKYVRPGGGFVPSFQ---LFEKG 133 (215)
T ss_dssp SCHHHHHHHHHHTSSCTTCCCSSE---EBCCC
T ss_pred CCHHHHHHHHHhccchhccCccce---eEeee
Confidence 4567889987 4 4677 88764
No 87
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.76 E-value=2.5e-18 Score=138.37 Aligned_cols=129 Identities=19% Similarity=0.315 Sum_probs=103.3
Q ss_pred CcccCCCCCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC------
Q 024977 69 PANVGDLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG------ 142 (259)
Q Consensus 69 ~~~vG~~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~------ 142 (259)
.+.+|+.+|+|++.|.+|+.++++++.|+ + +|++||++||++|..+++.|.++++++. ++.+++|+.+
T Consensus 10 ~~~~g~~~p~~~l~~~~g~~~~l~~~~gk---~-~lv~F~~~~C~~C~~~~~~l~~l~~~~~--~v~vv~i~~d~~~~~~ 83 (165)
T 3ha9_A 10 SEEVLEREASFSLTTIDGEVISLNNVGGD---V-VILWFMAAWCPSCVYMADLLDRLTEKYR--EISVIAIDFWTAEALK 83 (165)
T ss_dssp HHHHHHHHHCCCEEBTTSCEECGGGCCSS---E-EEEEEECTTCTTHHHHHHHHHHHHHHCT--TEEEEEEECCSHHHHH
T ss_pred cccccCcCCCCEeecCCCCEeeHHHhCCC---E-EEEEEECCCCcchhhhHHHHHHHHHHcC--CcEEEEEEeccccccc
Confidence 45689999999999999999999999774 4 4455559999999999999999999987 9999999986
Q ss_pred -------------ChHHHHHHHh--hC-CCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCc
Q 024977 143 -------------TPNKAQILAE--RL-PFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYT 206 (259)
Q Consensus 143 -------------~~~~~~~f~~--~~-~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~ 206 (259)
+.+.+++|.+ ++ +|+ ++.| ++++.+.||+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~d-~~~~~~~~~v~------------------------------ 129 (165)
T 3ha9_A 84 ALGLNKPGYPPPDTPEMFRKFIANYGDPSWI---MVMD-DGSLVEKFNVR------------------------------ 129 (165)
T ss_dssp HHTCCSTTSCCCCCHHHHHHHHHHHSCTTSE---EEEC-CSHHHHHTTCC------------------------------
T ss_pred ccccccccCCCCCCHHHHHHHHHHcCCCCee---EEeC-hHHHHHHhCCC------------------------------
Confidence 6677888887 45 777 8889 88888888763
Q ss_pred ccccCCCCCCccccCeEEEEe-CCeEEEEEecCCCCCCCCHHHHHHHhcc
Q 024977 207 IEATPDDRSSVLQQGGMFVFK-GKQLLYARKDEGTGDHASLDDVFDICCK 255 (259)
Q Consensus 207 ~~~~~~~~~~~~~~gg~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~~~ 255 (259)
..|.+|||| +|+|++ .+..++.+++.+.+.+
T Consensus 130 ------------~~P~~~lid~~G~i~~------~g~~~~~~~l~~~l~~ 161 (165)
T 3ha9_A 130 ------------SIDYIVIMDKSSNVLY------AGTTPSLGELESVIKS 161 (165)
T ss_dssp ------------SSSEEEEEETTCCEEE------EEESCCHHHHHHHHHH
T ss_pred ------------CceEEEEEcCCCcEEE------eCCCCCHHHHHHHHHH
Confidence 135789999 899998 2333356666665543
No 88
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.75 E-value=9.6e-18 Score=140.34 Aligned_cols=137 Identities=14% Similarity=0.158 Sum_probs=97.7
Q ss_pred CCcccCCCC--CCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHh-hHHHHHHHHHHHHHHhhC---CcEEEEEeC
Q 024977 68 FPANVGDLL--GDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPC-CWELASALKESKARFDSA---GVKLIAVGV 141 (259)
Q Consensus 68 ~~~~vG~~a--Pdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~-C~~~l~~L~~~~~~~~~~---gv~vv~Vs~ 141 (259)
....+|+.+ |+|++.|.+|+.++++++.|+ ++|++||++|||. |..+++.|+++++++.+. ++++|+|+.
T Consensus 11 ~~~~~g~~~~~p~f~l~d~~G~~v~l~~~~Gk----~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~ 86 (200)
T 2b7k_A 11 ANRGYGKPSLGGPFHLEDMYGNEFTEKNLLGK----FSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITC 86 (200)
T ss_dssp -----CCCCCCCCCEEEETTSCEEEGGGGTTS----CEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEES
T ss_pred hHhccCCCCcCCCEEEEcCCCCEEeHHHcCCC----EEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEEC
Confidence 445678886 999999999999999999874 5556666999996 999999999999999864 899999998
Q ss_pred C----ChHHHHHHHhhC--CCCCCCccc---CCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCC
Q 024977 142 G----TPNKAQILAERL--PFPMDCLYA---DPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPD 212 (259)
Q Consensus 142 ~----~~~~~~~f~~~~--~fp~~~ll~---D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~ 212 (259)
+ +++.+++|.++. +|+ .+. |..+++++.||+..... |.. . ++
T Consensus 87 D~~~d~~~~~~~~~~~~~~~~~---~l~~~~d~~~~~~~~~gv~~~~p-----~~~--------------~-------~~ 137 (200)
T 2b7k_A 87 DPARDSPAVLKEYLSDFHPSIL---GLTGTFDEVKNACKKYRVYFSTP-----PNV--------------K-------PG 137 (200)
T ss_dssp CTTTCCHHHHHHHHTTSCTTCE---EEECCHHHHHHHHHHTTC-------------------------------------
T ss_pred CCCCCCHHHHHHHHHHcCCCce---EEeCCHHHHHHHHHHcCcEEeec-----ccc--------------C-------CC
Confidence 8 578889999854 455 454 44678999999864211 000 0 00
Q ss_pred CCCCccccCeEEEEe-CCeEEEEEec
Q 024977 213 DRSSVLQQGGMFVFK-GKQLLYARKD 237 (259)
Q Consensus 213 ~~~~~~~~gg~fVid-~g~V~y~~~~ 237 (259)
..-...+.+.+|||| +|+|++.+..
T Consensus 138 ~~~~~~~~~~~~liD~~G~i~~~~~g 163 (200)
T 2b7k_A 138 QDYLVDHSIFFYLMDPEGQFVDALGR 163 (200)
T ss_dssp ---CTTTCCCEEEECTTSCEEEEECT
T ss_pred CCceeeecceEEEECCCCcEEEEeCC
Confidence 000134567999999 8999998864
No 89
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=99.75 E-value=1.2e-17 Score=141.04 Aligned_cols=90 Identities=14% Similarity=0.056 Sum_probs=74.7
Q ss_pred CcccCCCCCCcEEecCC-CCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC-----
Q 024977 69 PANVGDLLGDFSIFTAA-GEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG----- 142 (259)
Q Consensus 69 ~~~vG~~aPdf~l~d~~-G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~----- 142 (259)
--..++.+|+|++.|.+ |+.++++++.| ++||++||++|||+|+.++|.|+++++++++.|++||+|+.+
T Consensus 19 ~~~~~~~~p~f~l~~~~~G~~v~l~~~~G----k~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d~~~~~ 94 (208)
T 2f8a_A 19 YFQSMQSVYAFSARPLAGGEPVSLGSLRG----KVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQ 94 (208)
T ss_dssp ---CCCCGGGCEECBTTCSSCEEGGGGTT----SEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTT
T ss_pred chhhcCccCceEeeeCCCCCCccHHHcCC----CEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEECCccccc
Confidence 34467889999999999 99999999987 466777779999999999999999999999999999999975
Q ss_pred ---ChHHHHHHHh------h--CCCCCCCcccCC
Q 024977 143 ---TPNKAQILAE------R--LPFPMDCLYADP 165 (259)
Q Consensus 143 ---~~~~~~~f~~------~--~~fp~~~ll~D~ 165 (259)
+.+.+++|++ + ++|| +++|.
T Consensus 95 e~d~~~~i~~f~~~~~~~~~~~~~fp---~l~d~ 125 (208)
T 2f8a_A 95 ENAKNEEILNSLKYVRPGGGFEPNFM---LFEKC 125 (208)
T ss_dssp TCSCHHHHHHHHHHTSSCTTCCCSSE---EBCCC
T ss_pred CCCCHHHHHHHHHhcccccccccceE---EEEEe
Confidence 3567888886 3 5677 77653
No 90
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.75 E-value=1.5e-17 Score=151.25 Aligned_cols=124 Identities=13% Similarity=0.186 Sum_probs=105.2
Q ss_pred CCCCcccCCCCCCcE-----EecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEe
Q 024977 66 TEFPANVGDLLGDFS-----IFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVG 140 (259)
Q Consensus 66 ~~~~~~vG~~aPdf~-----l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs 140 (259)
....+.+|+.+|+|+ +.|.+|+.++++++.++ +||++||++||+.|+.+++.|+++++++++.|+.+|+|+
T Consensus 47 ~~~~l~vG~~aPdF~~~~~wL~d~dG~~vsLsdl~GK----~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs 122 (352)
T 2hyx_A 47 GAAQLESCGTAPDLKGITGWLNTPGNKPIDLKSLRGK----VVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVH 122 (352)
T ss_dssp SCSSCCCCCBCCCCCSCCEEESSGGGCCCCGGGGTTS----EEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred cccccCCCCcCCCccccccccCCCCCCEEcHHHhCCC----EEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEE
Confidence 345688999999999 99999999999999874 455555699999999999999999999999999999998
Q ss_pred CC------ChHHHHHHHh--hCCCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCC
Q 024977 141 VG------TPNKAQILAE--RLPFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPD 212 (259)
Q Consensus 141 ~~------~~~~~~~f~~--~~~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~ 212 (259)
.+ +.+.+++|.+ +++|| ++.|.+.++.+.|++.
T Consensus 123 ~d~~~~~d~~~~~~~~~~~~~l~fp---v~~D~~~~l~~~ygV~------------------------------------ 163 (352)
T 2hyx_A 123 TPEYAFEKVPGNVAKGAANLGISYP---IALDNNYATWTNYRNR------------------------------------ 163 (352)
T ss_dssp CCSSGGGGCHHHHHHHHHHHTCCSC---EEECTTSHHHHHTTCC------------------------------------
T ss_pred CCcccccCCHHHHHHHHHHcCCCcc---EEeCCcHHHHHHcCCC------------------------------------
Confidence 74 5677888887 57888 8999998888888762
Q ss_pred CCCCccccCeEEEEe-CCeEEEEEecC
Q 024977 213 DRSSVLQQGGMFVFK-GKQLLYARKDE 238 (259)
Q Consensus 213 ~~~~~~~~gg~fVid-~g~V~y~~~~~ 238 (259)
..|.+|||| +|+|++.+...
T Consensus 164 ------~~Pt~~lID~~G~Iv~~~~G~ 184 (352)
T 2hyx_A 164 ------YWPAEYLIDATGTVRHIKFGE 184 (352)
T ss_dssp ------EESEEEEECTTSBEEEEEESB
T ss_pred ------ccCEEEEEeCCCeEEEEEcCC
Confidence 135889998 89999998753
No 91
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=99.75 E-value=2.9e-17 Score=138.72 Aligned_cols=87 Identities=10% Similarity=0.072 Sum_probs=72.6
Q ss_pred ccCCCCCCcEEecCC-CCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC-------
Q 024977 71 NVGDLLGDFSIFTAA-GEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG------- 142 (259)
Q Consensus 71 ~vG~~aPdf~l~d~~-G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~------- 142 (259)
...+.+|+|++.|.+ |+.++|++++| ++||++||++|||+| .+++.|+++++++++.|++||+|+.+
T Consensus 12 ~~~~~~pdF~l~d~~~G~~v~Ls~~kG----Kvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d~f~~~e~ 86 (207)
T 2r37_A 12 GISGTIYEYGALTIDGEEYIPFKQYAG----KYVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGFPCNQFGKQEP 86 (207)
T ss_dssp ---CCGGGCEEEBTTSSCEEEGGGGTT----SEEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECCCBTTCCC
T ss_pred cccCccCCeEeeeCCCCCEEcHHHhCC----CEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECcccCcCCC
Confidence 455679999999999 99999999987 467777789999999 79999999999999999999999854
Q ss_pred -ChHHHHHHHh------h--CCCCCCCcccCC
Q 024977 143 -TPNKAQILAE------R--LPFPMDCLYADP 165 (259)
Q Consensus 143 -~~~~~~~f~~------~--~~fp~~~ll~D~ 165 (259)
+.+.+++|++ + ++|| +++|.
T Consensus 87 ~~~~~i~~f~~~~~~~~~~~~~fp---~l~d~ 115 (207)
T 2r37_A 87 GENSEILPTLKYVRPGGGFVPNFQ---LFEKG 115 (207)
T ss_dssp SCHHHHHHHHHHTSSCTTCCCSSE---EBCCC
T ss_pred CCHHHHHHHHHhcchhhccCccce---eeeEe
Confidence 4567888987 4 4677 78764
No 92
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.74 E-value=2.4e-17 Score=130.84 Aligned_cols=115 Identities=12% Similarity=0.127 Sum_probs=89.0
Q ss_pred CCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCChHHHHHHHh--h
Q 024977 76 LGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTPNKAQILAE--R 153 (259)
Q Consensus 76 aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~~~~~~f~~--~ 153 (259)
+|+|.+. .+|+.++++++.|+ ++|++||++||++|+.+++.|+++++++++.++.+++|+.++.+.+++|.+ +
T Consensus 5 a~~~~~~-~~G~~~~l~~~~gk----~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~ 79 (151)
T 3raz_A 5 ADELAGW-KDNTPQSLQSLKAP----VRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTP 79 (151)
T ss_dssp --CEEET-TTCCEECGGGCCSS----EEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSC
T ss_pred cchhhcc-cCCCEecHHHhCCC----EEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcC
Confidence 4444443 79999999999874 555556699999999999999999999988999999999999999999998 4
Q ss_pred CCCCCCCcccCCc---hHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCccccCeEEEEe-CC
Q 024977 154 LPFPMDCLYADPD---RKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSVLQQGGMFVFK-GK 229 (259)
Q Consensus 154 ~~fp~~~ll~D~~---~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gg~fVid-~g 229 (259)
++|| ++.|.+ ..+++.||.. ....|.+|||| +|
T Consensus 80 ~~~~---~~~~~~~~~~~~~~~~~~~----------------------------------------v~~~P~~~lid~~G 116 (151)
T 3raz_A 80 VSYP---IWRYTGANSRNFMKTYGNT----------------------------------------VGVLPFTVVEAPKC 116 (151)
T ss_dssp CSSC---EEEECCSCHHHHHHTTTCC----------------------------------------SCCSSEEEEEETTT
T ss_pred CCCc---eEecCccchHHHHHHhCCc----------------------------------------cCCCCEEEEECCCC
Confidence 6677 777653 3444544421 22357899999 89
Q ss_pred eEEEEEecC
Q 024977 230 QLLYARKDE 238 (259)
Q Consensus 230 ~V~y~~~~~ 238 (259)
+|++.+.+.
T Consensus 117 ~i~~~~~g~ 125 (151)
T 3raz_A 117 GYRQTITGE 125 (151)
T ss_dssp TEEEECCSC
T ss_pred cEEEEECCC
Confidence 999988654
No 93
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.74 E-value=7.3e-17 Score=124.09 Aligned_cols=126 Identities=13% Similarity=0.183 Sum_probs=100.8
Q ss_pred CCCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEE------eCCChHHHH
Q 024977 75 LLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAV------GVGTPNKAQ 148 (259)
Q Consensus 75 ~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~V------s~~~~~~~~ 148 (259)
++|+|++.|.+|+.++++++.|+ .+|++|+++||+.|..+++.|+++++++ ..++.++.| ..++.+.++
T Consensus 1 ~~p~f~l~~~~g~~~~l~~~~gk----~~lv~f~~~~C~~C~~~~~~l~~~~~~~-~~~~~~v~i~~~~~~~~~~~~~~~ 75 (138)
T 4evm_A 1 EVADFELMGVDGKTYRLSDYKGK----KVYLKFWASWCSICLASLPDTDEIAKEA-GDDYVVLTVVSPGHKGEQSEADFK 75 (138)
T ss_dssp CCCCCEEEBTTSCEEEGGGGTTS----EEEEEECCTTCHHHHHHHHHHHHHHHTC-TTTEEEEEEECTTSTTCCCHHHHH
T ss_pred CCCcceeECCCCCEEEHHHhCCC----EEEEEEEcCcCHHHHHHHHHHHHHHHHh-CCCcEEEEEEcCCCCchhhHHHHH
Confidence 48999999999999999999774 4555566999999999999999999884 568999999 445667788
Q ss_pred HHHhh--C-CCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCccccCeEEE
Q 024977 149 ILAER--L-PFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSVLQQGGMFV 225 (259)
Q Consensus 149 ~f~~~--~-~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gg~fV 225 (259)
+|.+. + +|+ ++.|.++++.+.||+. ..|..||
T Consensus 76 ~~~~~~~~~~~~---~~~d~~~~~~~~~~v~------------------------------------------~~P~~~l 110 (138)
T 4evm_A 76 NWYKGLDYKNLP---VLVDPSGKLLETYGVR------------------------------------------SYPTQAF 110 (138)
T ss_dssp HHHTTCCCTTCC---EEECTTCHHHHHTTCC------------------------------------------SSSEEEE
T ss_pred HHHhhcCCCCee---EEECcchHHHHHcCcc------------------------------------------cCCeEEE
Confidence 88874 4 667 8999999999888762 1357899
Q ss_pred Ee-CCeEEEEEecCCCCCCCCHHHHHHHhcc
Q 024977 226 FK-GKQLLYARKDEGTGDHASLDDVFDICCK 255 (259)
Q Consensus 226 id-~g~V~y~~~~~~~~d~~~~~~iL~a~~~ 255 (259)
+| +|+|++.+.+. .+.+++.+.+++
T Consensus 111 id~~G~i~~~~~g~-----~~~~~l~~~l~~ 136 (138)
T 4evm_A 111 IDKEGKLVKTHPGF-----MEKDAILQTLKE 136 (138)
T ss_dssp ECTTCCEEEEEESC-----CCHHHHHHHHHH
T ss_pred ECCCCcEEEeecCC-----CcHHHHHHHHHh
Confidence 98 89999988743 346777776654
No 94
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.74 E-value=7.5e-17 Score=124.66 Aligned_cols=128 Identities=18% Similarity=0.194 Sum_probs=104.4
Q ss_pred CCCCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCC-hHHHHHHHh
Q 024977 74 DLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGT-PNKAQILAE 152 (259)
Q Consensus 74 ~~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~-~~~~~~f~~ 152 (259)
..+|+|++.|.+|+.++++++.++ +++|.|| ++||+.|..+++.|+++++++. ++.+++|+.++ .+.+++|.+
T Consensus 2 ~~~p~~~l~~~~g~~~~l~~~~~k---~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~ 75 (136)
T 1lu4_A 2 DERLQFTATTLSGAPFDGASLQGK---PAVLWFW-TPWCPFCNAEAPSLSQVAAANP--AVTFVGIATRADVGAMQSFVS 75 (136)
T ss_dssp GGGGCCEEEBTTSCEEEGGGGTTS---CEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHHHH
T ss_pred CCCCCeEeecCCCCeecHHHhCCC---EEEEEEE-CCcChhHHHHHHHHHHHHHHCC--CcEEEEEEcCCCHHHHHHHHH
Confidence 358999999999999999999875 6666665 9999999999999999999886 99999999876 777888887
Q ss_pred --hCCCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCccccCeEEEEe-CC
Q 024977 153 --RLPFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSVLQQGGMFVFK-GK 229 (259)
Q Consensus 153 --~~~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gg~fVid-~g 229 (259)
+++|| ++.|++.++++.||+. ..|..|++| +|
T Consensus 76 ~~~~~~~---~~~d~~~~~~~~~~i~------------------------------------------~~P~~~lid~~G 110 (136)
T 1lu4_A 76 KYNLNFT---NLNDADGVIWARYNVP------------------------------------------WQPAFVFYRADG 110 (136)
T ss_dssp HHTCCSE---EEECTTSHHHHHTTCC------------------------------------------SSSEEEEECTTS
T ss_pred HcCCCce---EEECCchhHHHhcCCC------------------------------------------CCCEEEEECCCC
Confidence 57777 8999999999888762 135789998 88
Q ss_pred eEEEEEecCCCCCCCCHHHHHHHhcc
Q 024977 230 QLLYARKDEGTGDHASLDDVFDICCK 255 (259)
Q Consensus 230 ~V~y~~~~~~~~d~~~~~~iL~a~~~ 255 (259)
+|+ .+.+ .....+.+++.+.+.+
T Consensus 111 ~i~-~~~~--~~g~~~~~~l~~~l~~ 133 (136)
T 1lu4_A 111 TST-FVNN--PTAAMSQDELSGRVAA 133 (136)
T ss_dssp CEE-EECC--SSSCCCHHHHHHHHHH
T ss_pred cEE-EEEc--CCCccCHHHHHHHHHH
Confidence 888 6652 2344567888877764
No 95
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.73 E-value=6.2e-18 Score=137.44 Aligned_cols=87 Identities=17% Similarity=0.251 Sum_probs=64.7
Q ss_pred cCCCCCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeC--------CC
Q 024977 72 VGDLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGV--------GT 143 (259)
Q Consensus 72 vG~~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~--------~~ 143 (259)
-|..+|+|++.|.+|+.++++++.|+ + +|++||++||+.|+ +++.|+++++++++.|+.+|+|+. ++
T Consensus 8 ~~~~~~~f~l~d~~G~~~~l~~~~Gk---~-vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~ 82 (171)
T 3cmi_A 8 HMSEFYKLAPVDKKGQPFPFDQLKGK---V-VLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGS 82 (171)
T ss_dssp --CGGGGCCCBBTTSCBCCGGGGTTC---E-EEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC------
T ss_pred chhheeeeEEEcCCCCEecHHHcCCC---E-EEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCC
Confidence 35679999999999999999999874 4 55555699999999 999999999999999999999987 35
Q ss_pred hHHHHHHH-h--hCCCCCCCcccCCc
Q 024977 144 PNKAQILA-E--RLPFPMDCLYADPD 166 (259)
Q Consensus 144 ~~~~~~f~-~--~~~fp~~~ll~D~~ 166 (259)
.+.+++|. + +++|| ++.|.+
T Consensus 83 ~~~~~~~~~~~~~~~~p---~~~d~d 105 (171)
T 3cmi_A 83 DEEIAQFCQLNYGVTFP---IMKKID 105 (171)
T ss_dssp ------------CCCSC---BBCCCB
T ss_pred HHHHHHHHHhccCCCce---EEeecc
Confidence 66788888 6 57788 888654
No 96
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.73 E-value=9.2e-17 Score=129.53 Aligned_cols=119 Identities=18% Similarity=0.245 Sum_probs=94.4
Q ss_pred CCCcccCCCCCCcEEecC--CCCeEecccc-cccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC-
Q 024977 67 EFPANVGDLLGDFSIFTA--AGEPVLFKDL-WDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG- 142 (259)
Q Consensus 67 ~~~~~vG~~aPdf~l~d~--~G~~v~lsdl-~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~- 142 (259)
...+.+|+.+|+|++.|. +|+.++++++ .++ ++|| +||++|||+|+.+++.|++++++ ++.+++|+.+
T Consensus 19 ~~~~~~G~~~P~f~l~~~~~~g~~~~~~~~~~gk---~vll-~F~a~~C~~C~~~~~~l~~l~~~----~v~vv~v~~~~ 90 (168)
T 2b1k_A 19 LESALIGKPVPKFRLESLDNPGQFYQADVLTQGK---PVLL-NVWATWCPTCRAEHQYLNQLSAQ----GIRVVGMNYKD 90 (168)
T ss_dssp CCCTTTTSBCCCCEEEESSSTTCEEEGGGGCCSS---CEEE-EEECTTCHHHHHHHHHHHHHHHT----TCCEEEEEESC
T ss_pred ccccccCCcCCCeEeecccCCCcEeehhHhcCCC---EEEE-EEECCCCHHHHHHHHHHHHHHHC----CCEEEEEECCC
Confidence 345679999999999998 8999999986 443 4555 55599999999999999987754 8999999965
Q ss_pred ChHHHHHHHhh--CCCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCcccc
Q 024977 143 TPNKAQILAER--LPFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSVLQQ 220 (259)
Q Consensus 143 ~~~~~~~f~~~--~~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 220 (259)
+.+.+++|.+. ++|+. ++.|.++++++.||+. ..
T Consensus 91 ~~~~~~~~~~~~~~~~~~--~~~d~~~~~~~~~~v~------------------------------------------~~ 126 (168)
T 2b1k_A 91 DRQKAISWLKELGNPYAL--SLFDGDGMLGLDLGVY------------------------------------------GA 126 (168)
T ss_dssp CHHHHHHHHHHHCCCCSE--EEEETTCHHHHHHTCC------------------------------------------SS
T ss_pred ChHHHHHHHHHcCCCCce--eeECcchHHHHHcCcc------------------------------------------cc
Confidence 56778888874 55552 5688888888888763 14
Q ss_pred CeEEEEe-CCeEEEEEec
Q 024977 221 GGMFVFK-GKQLLYARKD 237 (259)
Q Consensus 221 gg~fVid-~g~V~y~~~~ 237 (259)
|.+|||| +|+|++.+.+
T Consensus 127 P~~~lid~~G~i~~~~~g 144 (168)
T 2b1k_A 127 PETFLIDGNGIIRYRHAG 144 (168)
T ss_dssp SEEEEECTTSBEEEEEES
T ss_pred CEEEEECCCCeEEEEEeC
Confidence 5799999 8999998875
No 97
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=99.73 E-value=1.3e-16 Score=130.36 Aligned_cols=149 Identities=12% Similarity=0.184 Sum_probs=100.6
Q ss_pred ccCCCCCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCH-hhHHHHHHHHHHHHHHhhCC--cEEEEEeCC----C
Q 024977 71 NVGDLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCP-CCWELASALKESKARFDSAG--VKLIAVGVG----T 143 (259)
Q Consensus 71 ~vG~~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp-~C~~~l~~L~~~~~~~~~~g--v~vv~Vs~~----~ 143 (259)
-+|.++|+|+|.|.+|+++++++|+|+ +||++||.+||| .|..+++.|.++++++++.| +++|+||.| +
T Consensus 7 P~~~~~PdF~L~d~~G~~v~l~d~~Gk----~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp~~Dt 82 (170)
T 4hde_A 7 PLNWDLETFQFTNQDGKPFGTKDLKGK----VWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPDLDK 82 (170)
T ss_dssp CCCBCCCCCEEECTTSCEEEHHHHTTS----CEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCC
T ss_pred CCCCcCCCcEEECCCCCEEeHHHhCCC----EEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCccccc
Confidence 368899999999999999999999884 566666799998 69999999999988887665 788889875 5
Q ss_pred hHHHHHHHhhCC--CCCCCcccCCchH-HHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCcccc
Q 024977 144 PNKAQILAERLP--FPMDCLYADPDRK-VYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSVLQQ 220 (259)
Q Consensus 144 ~~~~~~f~~~~~--fp~~~ll~D~~~~-~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 220 (259)
++.+++|.+.++ ++.-.++.+.+.+ +.+.++.. .+.. ......+...+.
T Consensus 83 p~~l~~y~~~~~~~~~~~~~ltg~~~~~~~~~~~~~-------------------------~~~~---~~~~~~~~~~H~ 134 (170)
T 4hde_A 83 PENLKAFIQKFTEDTSNWNLLTGYSLEDITKFSKDN-------------------------FQSL---VDKPENGQVIHG 134 (170)
T ss_dssp HHHHHHHHTTTCSCCTTEEEEBCSCHHHHHHHHHHH-------------------------HCCC---CBCCTTSCCBCC
T ss_pred HHHHHHHHHHcCCCCCCceecCcccHHHHHHHHHhc-------------------------cccc---ccCCCCceEEee
Confidence 788899988543 2210134443322 22111100 0000 001112235677
Q ss_pred CeEEEEe-CCeEEEEEecCCCCCCCCHHHHHHHhc
Q 024977 221 GGMFVFK-GKQLLYARKDEGTGDHASLDDVFDICC 254 (259)
Q Consensus 221 gg~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~~ 254 (259)
+.+|||| +|+|+..|.... ..+.++|++.++
T Consensus 135 ~~~~liD~~G~i~~~~~g~~---~~~~~~l~~~ik 166 (170)
T 4hde_A 135 TSFYLIDQNGKVMKKYSGIS---NTPYEDIIRDMK 166 (170)
T ss_dssp CEEEEECTTSCEEEEEESSS---SCCHHHHHHHHH
T ss_pred eEEEEEcCCCeEEEEECCCC---CCCHHHHHHHHH
Confidence 8999999 899998887543 345777777664
No 98
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.72 E-value=2.1e-16 Score=121.76 Aligned_cols=95 Identities=22% Similarity=0.218 Sum_probs=81.2
Q ss_pred cCCCCCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCC-hHHHHHH
Q 024977 72 VGDLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGT-PNKAQIL 150 (259)
Q Consensus 72 vG~~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~-~~~~~~f 150 (259)
+|..+|+|++.+.+|+.++++++.++ +++|.|| ++||+.|+.+++.|+++++++. ++.++.|+.++ .+.+++|
T Consensus 1 ~~~~~p~~~~~~~~g~~~~l~~~~~k---~~ll~f~-~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~ 74 (136)
T 1zzo_A 1 TVPAQLQFSAKTLDGHDFHGESLLGK---PAVLWFW-APWCPTCQGEAPVVGQVAASHP--EVTFVGVAGLDQVPAMQEF 74 (136)
T ss_dssp CCCGGGCCEEEBTTSCEEEGGGGTTS---CEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHH
T ss_pred CCCCCCCcccccCCCCEeeHHHhCCC---eEEEEEE-cCCChhHHHHHHHHHHHHHHcC--CeEEEEEeCCCCHHHHHHH
Confidence 36789999999999999999999775 6666655 9999999999999999999886 89999999875 6778888
Q ss_pred Hh--hC-CCCCCCcccCCchHHHHHhCC
Q 024977 151 AE--RL-PFPMDCLYADPDRKVYNLLGL 175 (259)
Q Consensus 151 ~~--~~-~fp~~~ll~D~~~~~~~~~Gv 175 (259)
.+ ++ +|| ++.|.+.++.+.||+
T Consensus 75 ~~~~~~~~~~---~~~d~~~~~~~~~~i 99 (136)
T 1zzo_A 75 VNKYPVKTFT---QLADTDGSVWANFGV 99 (136)
T ss_dssp HHHTTCTTSE---EEECTTCHHHHHTTC
T ss_pred HHHcCCCceE---EEEcCCcHHHHHcCC
Confidence 87 45 667 888998888888876
No 99
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.71 E-value=1.1e-16 Score=125.88 Aligned_cols=97 Identities=8% Similarity=0.139 Sum_probs=80.2
Q ss_pred cCCCCCC-cEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhh-CCcEEEEEeCCC-hHHHH
Q 024977 72 VGDLLGD-FSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDS-AGVKLIAVGVGT-PNKAQ 148 (259)
Q Consensus 72 vG~~aPd-f~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~-~gv~vv~Vs~~~-~~~~~ 148 (259)
+|+.+|+ |++.|.+|+.++++++.++ .+|++|+++||+.|+.+++.|+++++++.+ .++.+++|+.+. .+.++
T Consensus 3 ~~~~~P~~f~l~~~~g~~~~l~~~~gk----~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~ 78 (144)
T 1i5g_A 3 LKKFFPYSTNVLKGAAADIALPSLAGK----TVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFK 78 (144)
T ss_dssp TTTSCSSCSEEEETTEEEEEGGGGTTS----EEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHH
T ss_pred hhhhCCCceEEEcCCCCEecHHHcCCC----EEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHH
Confidence 6889999 9999999999999999874 455566689999999999999999999985 799999999984 67788
Q ss_pred HHHhhCC---CCCCCccc-CCchHHHHHhCC
Q 024977 149 ILAERLP---FPMDCLYA-DPDRKVYNLLGL 175 (259)
Q Consensus 149 ~f~~~~~---fp~~~ll~-D~~~~~~~~~Gv 175 (259)
+|.++.+ || ++. |.+.++++.||+
T Consensus 79 ~~~~~~~~~~~~---~~~~d~~~~~~~~~~v 106 (144)
T 1i5g_A 79 DYYAKMPWLALP---FEDRKGMEFLTTGFDV 106 (144)
T ss_dssp HHHTTCSSEECC---TTCHHHHHHHHHHTTC
T ss_pred HHHHhCCccccc---cCchHHHHHHHHHcCC
Confidence 8888554 55 333 666777777776
No 100
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.70 E-value=9.1e-17 Score=126.78 Aligned_cols=97 Identities=13% Similarity=0.166 Sum_probs=79.4
Q ss_pred ccCCCCCC-cEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhh-CCcEEEEEeCCC-hHHH
Q 024977 71 NVGDLLGD-FSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDS-AGVKLIAVGVGT-PNKA 147 (259)
Q Consensus 71 ~vG~~aPd-f~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~-~gv~vv~Vs~~~-~~~~ 147 (259)
.+|+.+|+ |++.|.+| .++++++.++ .+|++|+++||+.|+.+++.|+++++++.+ .++.+++|+.+. .+.+
T Consensus 3 ~~~~~~P~~f~l~~~~g-~~~l~~~~gk----~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~ 77 (146)
T 1o8x_A 3 GLDKYLPGIEKLRRGDG-EVEVKSLAGK----LVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGF 77 (146)
T ss_dssp CGGGTSTTCCEEEETTE-EEEGGGGTTC----EEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHH
T ss_pred chHhhCCCceEEEcCCC-CCcHHHhCCC----EEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHH
Confidence 57899999 99999999 9999999874 455555689999999999999999999984 789999999985 5678
Q ss_pred HHHHhhC---CCCCCCccc-CCchHHHHHhCC
Q 024977 148 QILAERL---PFPMDCLYA-DPDRKVYNLLGL 175 (259)
Q Consensus 148 ~~f~~~~---~fp~~~ll~-D~~~~~~~~~Gv 175 (259)
++|.+.. .|| ++. |.+.++.+.||+
T Consensus 78 ~~~~~~~~~~~~~---~~~~d~~~~~~~~~~v 106 (146)
T 1o8x_A 78 AGYFAKMPWLAVP---FAQSEAVQKLSKHFNV 106 (146)
T ss_dssp HHHHTTCSSEECC---GGGHHHHHHHHHHTTC
T ss_pred HHHHHHCCceeec---cchhhHHHHHHHHhCC
Confidence 8888754 455 343 666777777776
No 101
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.67 E-value=5.5e-16 Score=122.87 Aligned_cols=121 Identities=17% Similarity=0.194 Sum_probs=91.6
Q ss_pred CCCcccCCCCCCcEEecCCC--------CeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEE
Q 024977 67 EFPANVGDLLGDFSIFTAAG--------EPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIA 138 (259)
Q Consensus 67 ~~~~~vG~~aPdf~l~d~~G--------~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~ 138 (259)
...+.+|+.+|+|++.+.+| +.++++++.++ ++||.| ++.||+.|..+++.|++++++ .++.+++
T Consensus 5 ~~~~~~g~~~p~f~l~~~~g~~~~~~~~~~~~l~~~~gk---~~ll~f-~~~~C~~C~~~~~~l~~l~~~---~~v~~v~ 77 (156)
T 1kng_A 5 IPSALIGRPAPQTALPPLEGLQADNVQVPGLDPAAFKGK---VSLVNV-WASWCVPCHDEAPLLTELGKD---KRFQLVG 77 (156)
T ss_dssp -------CBCCCCCBCCCTTCEETTEECCCBCGGGGTTS---CEEEEE-ECTTCHHHHHHHHHHHHHTTC---TTSEEEE
T ss_pred hhhHHhCCCCCCceeeeccCcccccccCceechHHhCCC---EEEEEE-EcccCHhHHHHHHHHHHHHhc---CCeEEEE
Confidence 34567999999999999999 99999999875 555555 589999999999999988764 4599999
Q ss_pred EeCC-ChHHHHHHHhh--CCCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCC
Q 024977 139 VGVG-TPNKAQILAER--LPFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRS 215 (259)
Q Consensus 139 Vs~~-~~~~~~~f~~~--~~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~ 215 (259)
|+.+ +.+..++|.+. ++|+. ++.|.+.++++.||+.
T Consensus 78 v~~~~~~~~~~~~~~~~~~~~~~--~~~d~~~~~~~~~~v~--------------------------------------- 116 (156)
T 1kng_A 78 INYKDAADNARRFLGRYGNPFGR--VGVDANGRASIEWGVY--------------------------------------- 116 (156)
T ss_dssp EEESCCHHHHHHHHHHHCCCCSE--EEEETTSHHHHHTTCC---------------------------------------
T ss_pred EECCCCHHHHHHHHHHcCCCCce--eeeCchhHHHHhcCcC---------------------------------------
Confidence 9875 56778888874 55553 6788888888887762
Q ss_pred CccccCeEEEEe-CCeEEEEEecC
Q 024977 216 SVLQQGGMFVFK-GKQLLYARKDE 238 (259)
Q Consensus 216 ~~~~~gg~fVid-~g~V~y~~~~~ 238 (259)
..|.+|||| +|+|++.+.+.
T Consensus 117 ---~~P~~~~id~~G~i~~~~~g~ 137 (156)
T 1kng_A 117 ---GVPETFVVGREGTIVYKLVGP 137 (156)
T ss_dssp ---SSCEEEEECTTSBEEEEEESC
T ss_pred ---ccCeEEEEcCCCCEEEEEeCC
Confidence 145789998 89999988743
No 102
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.66 E-value=4e-16 Score=124.81 Aligned_cols=129 Identities=14% Similarity=0.128 Sum_probs=99.2
Q ss_pred ccCCCCCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC------Ch
Q 024977 71 NVGDLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG------TP 144 (259)
Q Consensus 71 ~vG~~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~------~~ 144 (259)
.+|+.+| ++.|.+|+.++++++.++ ++| ++||++||++|+.+++.|++++++++..|+++|+|+.+ +.
T Consensus 15 ~~~~~~p--~l~~~~g~~~~~~~~~gk---~vl-v~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~ 88 (164)
T 2h30_A 15 TVPHTMS--TMKTADNRPASVYLKKDK---PTL-IKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKD 88 (164)
T ss_dssp CHHHHHT--TCEETTSSBGGGGCCTTS---CEE-EEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCT
T ss_pred ccCCcCC--ccCCCCCCEeeHHHhCCC---EEE-EEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCH
Confidence 3566666 778899999999998774 554 55559999999999999999999999999999999964 35
Q ss_pred HHHHHHHhhC--C-CCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCccccC
Q 024977 145 NKAQILAERL--P-FPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSVLQQG 221 (259)
Q Consensus 145 ~~~~~f~~~~--~-fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g 221 (259)
+.+++|.+.. . |+ +..|.+.++++.||+. ..|
T Consensus 89 ~~~~~~~~~~~~~~~~---~~~d~~~~~~~~~~v~------------------------------------------~~P 123 (164)
T 2h30_A 89 GEFQKWYAGLNYPKLP---VVTDNGGTIAQNLNIS------------------------------------------VYP 123 (164)
T ss_dssp THHHHHHTTSCCTTSC---EEECTTCHHHHHTTCC------------------------------------------SSS
T ss_pred HHHHHHHHhCCCCcce---EEEcCchHHHHHcCCC------------------------------------------ccc
Confidence 5677777644 4 55 8889988888888763 135
Q ss_pred eEEEEe-CCeEEEEEecCCCCCCCCHHHHHHHhcc
Q 024977 222 GMFVFK-GKQLLYARKDEGTGDHASLDDVFDICCK 255 (259)
Q Consensus 222 g~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~~~ 255 (259)
..|||| +|+|++.+... .+.+++.+.+.+
T Consensus 124 ~~~lid~~G~i~~~~~g~-----~~~~~l~~~i~~ 153 (164)
T 2h30_A 124 SWALIGKDGDVQRIVKGS-----INEAQALALIRN 153 (164)
T ss_dssp EEEEECTTSCEEEEEESC-----CCHHHHHHHHHC
T ss_pred eEEEECCCCcEEEEEcCC-----CCHHHHHHHHHH
Confidence 789998 89999988752 245566555543
No 103
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.66 E-value=1.1e-16 Score=129.75 Aligned_cols=102 Identities=14% Similarity=0.209 Sum_probs=78.3
Q ss_pred CCCCcccCCCCCCc-EEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhh-CCcEEEEEeCCC
Q 024977 66 TEFPANVGDLLGDF-SIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDS-AGVKLIAVGVGT 143 (259)
Q Consensus 66 ~~~~~~vG~~aPdf-~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~-~gv~vv~Vs~~~ 143 (259)
...+..+|+.+|+| ++.|.+| .++++++.|+ +||++||++||+.|+.+++.|+++++++++ .++.+|+|+.+.
T Consensus 18 ~~~~~~vG~~~P~f~~l~~~~g-~v~l~~~~gk----~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~ 92 (165)
T 3s9f_A 18 GSHMSGVAKHLGEALKLRKQAD-TADMDSLSGK----TVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDE 92 (165)
T ss_dssp ----CHHHHHHHHTSCEEETTE-EECSGGGTTS----EEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCC
T ss_pred chhhhhhcccCCcceeeecCCC-cccHHHcCCC----EEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCC
Confidence 34566799999999 9999999 9999999874 555566699999999999999999999986 799999999886
Q ss_pred h-HHHHHHHhhCC---CCCCCcccCC-chHHHHHhCC
Q 024977 144 P-NKAQILAERLP---FPMDCLYADP-DRKVYNLLGL 175 (259)
Q Consensus 144 ~-~~~~~f~~~~~---fp~~~ll~D~-~~~~~~~~Gv 175 (259)
. +..++|.++.+ ++ +..|. ..++.+.||+
T Consensus 93 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~v 126 (165)
T 3s9f_A 93 EEDDFNAYYAKMPWLSIP---FANRNIVEALTKKYSV 126 (165)
T ss_dssp SHHHHHHHHTTCSSEECC---TTCHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHhCCCcccc---cCchhHHHHHHHHcCC
Confidence 4 66788887544 34 33322 2566666665
No 104
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.65 E-value=2.3e-16 Score=123.70 Aligned_cols=98 Identities=13% Similarity=0.281 Sum_probs=78.2
Q ss_pred cccCCCCCCc-EEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHh-hCCcEEEEEeCCC-hHH
Q 024977 70 ANVGDLLGDF-SIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFD-SAGVKLIAVGVGT-PNK 146 (259)
Q Consensus 70 ~~vG~~aPdf-~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~-~~gv~vv~Vs~~~-~~~ 146 (259)
..+|+.+|+| ++.|.+| .++++++.++ + +|++|+++||+.|+.+++.|++++++++ +.++.+++|+.+. .+.
T Consensus 2 ~~~g~~~p~~~~l~~~~g-~~~l~~~~gk---~-vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~ 76 (144)
T 1o73_A 2 SGLAKYLPGATNLLSKSG-EVSLGSLVGK---T-VFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESD 76 (144)
T ss_dssp CGGGGTSCTTCCBBCTTS-CBCSGGGTTC---E-EEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHH
T ss_pred cchhhhCccceEeecCCC-cCcHHHhCCC---E-EEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHH
Confidence 3579999997 9999999 9999999874 4 5555569999999999999999999997 4789999999986 456
Q ss_pred HHHHHhhCC---CCCCCccc-CCchHHHHHhCC
Q 024977 147 AQILAERLP---FPMDCLYA-DPDRKVYNLLGL 175 (259)
Q Consensus 147 ~~~f~~~~~---fp~~~ll~-D~~~~~~~~~Gv 175 (259)
.++|.+..+ +| +.. |.+.++.+.||+
T Consensus 77 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~v 106 (144)
T 1o73_A 77 FHDYYGKMPWLALP---FDQRSTVSELGKTFGV 106 (144)
T ss_dssp HHHHHTTCSSEECC---TTCHHHHHHHHHHHTC
T ss_pred HHHHHHhCCceEee---ccchhHHHHHHHHcCC
Confidence 778877543 44 332 556677777765
No 105
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=99.41 E-value=4.3e-17 Score=127.48 Aligned_cols=99 Identities=14% Similarity=0.156 Sum_probs=75.0
Q ss_pred CCCCCcEEecCCCCeEeccc-ccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHh--hCCcEEEEEeCCC-hHHHHH
Q 024977 74 DLLGDFSIFTAAGEPVLFKD-LWDQNEGVAVVALLRHFGCPCCWELASALKESKARFD--SAGVKLIAVGVGT-PNKAQI 149 (259)
Q Consensus 74 ~~aPdf~l~d~~G~~v~lsd-l~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~--~~gv~vv~Vs~~~-~~~~~~ 149 (259)
+.+|+|++.|.+|+.+++++ +.|+ +.+|++|+++|||.|+.+++.|++++++++ ..++.+++|+.++ .+.+++
T Consensus 2 ~~~p~~~l~~~~g~~~~l~~~~~gk---~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~ 78 (143)
T 2lus_A 2 EFIQGIKLVKKNRCEVNANEALKDK---DIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQ 78 (143)
Confidence 46899999999999999999 7764 367777779999999999999999999885 3589999999874 456777
Q ss_pred HHhh--CCCCCCCcccCCchHHHHHhCC
Q 024977 150 LAER--LPFPMDCLYADPDRKVYNLLGL 175 (259)
Q Consensus 150 f~~~--~~fp~~~ll~D~~~~~~~~~Gv 175 (259)
|.+. ++|+.-.+..|.++++++.||+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v 106 (143)
T 2lus_A 79 YMMESHGDWLAIPYRSGPASNVTAKYGI 106 (143)
Confidence 7774 3444111344555566665554
No 106
>4h86_A Peroxiredoxin type-2; oxidoreductase; 2.00A {Saccharomyces cerevisiae} PDB: 4dsq_A 4dsr_A 4dss_A
Probab=99.61 E-value=1e-14 Score=121.47 Aligned_cols=150 Identities=17% Similarity=0.213 Sum_probs=112.8
Q ss_pred CCCcccCCCCCC--c--EEecC-----C----C--CeEecccccccCCCcEEEEEEcCCCCHhhHH-HHHHHHHHHHHH-
Q 024977 67 EFPANVGDLLGD--F--SIFTA-----A----G--EPVLFKDLWDQNEGVAVVALLRHFGCPCCWE-LASALKESKARF- 129 (259)
Q Consensus 67 ~~~~~vG~~aPd--f--~l~d~-----~----G--~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~-~l~~L~~~~~~~- 129 (259)
.....+|+++|. + ++... + | ++++++++..++ +++||+++++.++|.|.. ++|.+.+.++++
T Consensus 23 ~~~~~v~~~~P~gdv~f~yip~~~~~~~~~~c~~P~~v~ls~~~~k~-KkVVLf~vPGAFTPtCS~~hlPgf~~~~d~~~ 101 (199)
T 4h86_A 23 SMSDLVNKKFPAGDYKFQYIAISQSDADSESCKMPQTVEWSKLISEN-KKVIITGAPAAFSPTCTVSHIPGYINYLDELV 101 (199)
T ss_dssp CBCTTTTSBCCCTTCEEEECCCCSSSTTSGGGTSCEEEEHHHHHHHC-SEEEEEECSCTTCHHHHHTTHHHHHHHHHHHH
T ss_pred hhHHHhCCCCCCCCceEEEecCCccccccccCCCCeeeEHHHHhcCC-CeEEEEEeCCCcCCcCChhhChHHHHHHHHHH
Confidence 445569999995 3 33321 1 2 567888886431 489999999999999987 799999998875
Q ss_pred hhCCc-EEEEEeCCChHHHHHHHhhC------CCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHH
Q 024977 130 DSAGV-KLIAVGVGTPNKAQILAERL------PFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAV 202 (259)
Q Consensus 130 ~~~gv-~vv~Vs~~~~~~~~~f~~~~------~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~ 202 (259)
+++|+ +|+.|+.++++.+++|.+.+ .++ +++|+++++.++||+.....
T Consensus 102 k~kGvd~I~ciSVND~FVm~AW~k~~~~~~~~~i~---~laD~~~eftkalGl~~~~~---------------------- 156 (199)
T 4h86_A 102 KEKEVDQVIVVTVDNPFANQAWAKSLGVKDTTHIK---FASDPGCAFTKSIGFELAVG---------------------- 156 (199)
T ss_dssp HHSCCCEEEEEESSCHHHHHHHHHHTTCCCCSSEE---EEECGGGHHHHHTTCEEEEE----------------------
T ss_pred HhcCCcEEEEEEcCCHHHHHHHHHHhccccccccc---ccCCcchHHHHhcCceeecC----------------------
Confidence 78998 58889999999999998843 344 89999999999999854210
Q ss_pred hcCcccccCCCCCCccccCeEEEEeCCeEEEEEecCCCCCC---CCHHHHHHHh
Q 024977 203 QNYTIEATPDDRSSVLQQGGMFVFKGKQLLYARKDEGTGDH---ASLDDVFDIC 253 (259)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~gg~fVid~g~V~y~~~~~~~~d~---~~~~~iL~a~ 253 (259)
. ++..-.+-++|||+|+|.|.++.+++++. ...|.||+.|
T Consensus 157 ----~-------gg~RS~Rya~IVdDGvV~~~~vE~~pg~~~~vS~ae~vL~~L 199 (199)
T 4h86_A 157 ----D-------GVYWSGRWAMVVENGIVTYAAKETNPGTDVTVSSVESVLAHL 199 (199)
T ss_dssp ----T-------TEEEECSEEEEEETTEEEEEEECSSTTTCCSTTSHHHHHTTC
T ss_pred ----C-------CcceeeEEEEEEECCEEEEEEEeCCCCCCCcccCHHHHHhcC
Confidence 0 01223467899999999999999887654 4567777643
No 107
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.00 E-value=4.6e-10 Score=89.54 Aligned_cols=121 Identities=7% Similarity=-0.002 Sum_probs=77.1
Q ss_pred cccCCCCCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHH---HHHHHHHhhCCcEEEEEeCCChHH
Q 024977 70 ANVGDLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASAL---KESKARFDSAGVKLIAVGVGTPNK 146 (259)
Q Consensus 70 ~~vG~~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L---~~~~~~~~~~gv~vv~Vs~~~~~~ 146 (259)
...+...+++ +..|+.+++++..++ +++|.||.++||++|+.+.+.| .++...+ ..++.++.|..+...
T Consensus 24 ~~~~~~~~~~---~~~~~~~~~a~~~gk---~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~-~~~~~~v~vd~~~~~- 95 (154)
T 2ju5_A 24 RPIAAANLQW---ESYAEALEHSKQDHK---PIGLFFTGSDWCMWCIKMQDQILQSSEFKHFA-GVHLHMVEVDFPQKN- 95 (154)
T ss_dssp CSSCCCCCCE---ECHHHHHHHHHHHCC---CEEEEEECTTTCHHHHHHHHHTTTSHHHHHHH-HHHCEEEEEECCSSC-
T ss_pred hhcccCCCCC---CCHHHHHHHHHhCCC---eEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHh-cCcEEEEEecCcccc-
Confidence 3455556666 445777888887764 5555555489999999999999 5654433 346788888766533
Q ss_pred HHHHHhhCCCCCCCcccCCchHHHHHhCCcccccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCccccCeEEEE
Q 024977 147 AQILAERLPFPMDCLYADPDRKVYNLLGLYHGVGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSVLQQGGMFVF 226 (259)
Q Consensus 147 ~~~f~~~~~fp~~~ll~D~~~~~~~~~Gv~~~~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gg~fVi 226 (259)
.++|+ +.|.+.++.+.||+ ...|..+++
T Consensus 96 ------~~~~~----~~~~~~~l~~~~~v------------------------------------------~~~Pt~~~~ 123 (154)
T 2ju5_A 96 ------HQPEE----QRQKNQELKAQYKV------------------------------------------TGFPELVFI 123 (154)
T ss_dssp ------CCCHH----HHHHHHHHHHHTTC------------------------------------------CSSSEEEEE
T ss_pred ------CCChh----hHhhHHHHHHHcCC------------------------------------------CCCCEEEEE
Confidence 12222 34445555555544 225788999
Q ss_pred e-CCeEEEEEecCCCCCCCCHHHHHHHhc
Q 024977 227 K-GKQLLYARKDEGTGDHASLDDVFDICC 254 (259)
Q Consensus 227 d-~g~V~y~~~~~~~~d~~~~~~iL~a~~ 254 (259)
| +|++++.+ +.. ..+.+++++.+.
T Consensus 124 d~~G~~~~~~-G~~---~~~~~~l~~~l~ 148 (154)
T 2ju5_A 124 DAEGKQLARM-GFE---PGGGAAYVSKVK 148 (154)
T ss_dssp CTTCCEEEEE-CCC---TTCHHHHHHHHH
T ss_pred cCCCCEEEEe-cCC---CCCHHHHHHHHH
Confidence 8 89999877 433 335666666554
No 108
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=98.92 E-value=6.2e-09 Score=79.41 Aligned_cols=62 Identities=10% Similarity=0.171 Sum_probs=42.4
Q ss_pred CCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC
Q 024977 76 LGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG 142 (259)
Q Consensus 76 aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~ 142 (259)
+++++..+.+|+........+ +.+|++|+++||+.|+...+.|.++.+++. .++.++.|+.+
T Consensus 6 ~~~l~~~~~~~~~~~~~~~~~----k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~-~~v~~~~v~~~ 67 (126)
T 2l57_A 6 IKQINFQSINVVENLEEAKEG----IPTIIMFKTDTCPYCVEMQKELSYVSKERE-GKFNIYYARLE 67 (126)
T ss_dssp SSCTTTTCCSEESSTTTCCSS----SCEEEEEECSSCHHHHHHHHHHHHHHHHSS-SSCEEEEEETT
T ss_pred cCCCCccccchhHHHHHHhCC----CcEEEEEECCCCccHHHHHHHHHHHHHHhc-CCeEEEEEeCC
Confidence 445544444444333222222 455556669999999999999999998886 67899988843
No 109
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=98.79 E-value=9.5e-08 Score=73.16 Aligned_cols=64 Identities=8% Similarity=0.138 Sum_probs=41.4
Q ss_pred ccCCCCCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeC
Q 024977 71 NVGDLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGV 141 (259)
Q Consensus 71 ~vG~~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~ 141 (259)
.....+|++. +.+++.++.....+ +.+|+.|++.||+.|+...+.|.++..++. .++.++.|..
T Consensus 19 ~~~~~~~~~~--~~~~~~~~~~~~~~----k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~-~~v~~~~vd~ 82 (128)
T 3ul3_B 19 RMFKKVPRLQ--QNGSNIINGVNMKN----TVIVLYFFAKWCQACTMQSTEMDKLQKYYG-KRIYLLKVDL 82 (128)
T ss_dssp -------CCC--CCCCSSSSBTTSCC----SEEEEEEECTTCHHHHHHHHHHHHHHHHHG-GGEEEEEEEG
T ss_pred HHhccCCccc--cCCccHHHHHHccC----CEEEEEEECCCCHHHHHHhHHHHHHHHHhc-CCeEEEEEEC
Confidence 3455567665 44455555544444 466666679999999999999999998886 3577777763
No 110
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=98.65 E-value=1.1e-07 Score=73.10 Aligned_cols=95 Identities=15% Similarity=0.231 Sum_probs=64.7
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHH--HHHHHHhhCCcEEEEEeCCChHHHHHHHhhCCCCCCCcccCCchHHHHHhCCccc
Q 024977 101 VAVVALLRHFGCPCCWELASALK--ESKARFDSAGVKLIAVGVGTPNKAQILAERLPFPMDCLYADPDRKVYNLLGLYHG 178 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~--~~~~~~~~~gv~vv~Vs~~~~~~~~~f~~~~~fp~~~ll~D~~~~~~~~~Gv~~~ 178 (259)
+.||++|+++||++|+...+.|. ++..++.. ++.++.|..++ .|.+.++.+.||+..
T Consensus 30 k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~-~~~~~~vd~~~-------------------~~~~~~l~~~~~v~~- 88 (133)
T 3fk8_A 30 KPTLLVFGANWCTDCRALDKSLRNQKNTALIAK-HFEVVKIDVGN-------------------FDRNLELSQAYGDPI- 88 (133)
T ss_dssp CCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHH-HCEEEEEECTT-------------------TTSSHHHHHHTTCGG-
T ss_pred CcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcC-CEEEEEEeCCc-------------------ccchHHHHHHhCCcc-
Confidence 45666667999999999999999 88887753 68888887643 245566677776621
Q ss_pred ccccccCCchhHHHHHHHHHHHHHhcCcccccCCCCCCccccCeEEEEe-CCeEEEEEecCCCCC--CCCHHHHHHHhc
Q 024977 179 VGRTFFNPASAKVFSRFEALRKAVQNYTIEATPDDRSSVLQQGGMFVFK-GKQLLYARKDEGTGD--HASLDDVFDICC 254 (259)
Q Consensus 179 ~~~~~~~p~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gg~fVid-~g~V~y~~~~~~~~d--~~~~~~iL~a~~ 254 (259)
....|..+++| +|++++.+......+ ..+.+++.+.+.
T Consensus 89 --------------------------------------~~~~Pt~~~~d~~G~~~~~~~g~~~~~~~~~~~~~l~~~l~ 129 (133)
T 3fk8_A 89 --------------------------------------QDGIPAVVVVNSDGKVRYTTKGGELANARKMSDQGIYDFFA 129 (133)
T ss_dssp --------------------------------------GGCSSEEEEECTTSCEEEECCSCTTTTGGGSCHHHHHHHHH
T ss_pred --------------------------------------CCccceEEEECCCCCEEEEecCCcccccccCCHHHHHHHHH
Confidence 02356888887 889998887644322 234555555443
No 111
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=98.54 E-value=8.3e-07 Score=69.45 Aligned_cols=67 Identities=21% Similarity=0.264 Sum_probs=47.8
Q ss_pred ccCCCCCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC
Q 024977 71 NVGDLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG 142 (259)
Q Consensus 71 ~vG~~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~ 142 (259)
..|..+++..+.+.+++.+. +...+ ++.+|+.|++.||+.|+...+.|.++..++.. .+.++.|..+
T Consensus 30 ~~~~~~~~~~v~~l~~~~~~--~~~~~--~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~ 96 (148)
T 3p2a_A 30 RCGHSLFDGEVINATAETLD--KLLQD--DLPMVIDFWAPWCGPCRSFAPIFAETAAERAG-KVRFVKVNTE 96 (148)
T ss_dssp TTCCBTTCCCCEECCTTTHH--HHTTC--SSCEEEEEECSSCHHHHHHHHHHHHHHHHTTT-TCEEEEEETT
T ss_pred hcCCccccCCceecCHHHHH--HHHhc--CCcEEEEEECCCCHHHHHHHHHHHHHHHHcCC-ceEEEEEECc
Confidence 35667777777777776544 23222 25556666699999999999999999988753 4777777654
No 112
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=98.50 E-value=5.2e-08 Score=75.42 Aligned_cols=93 Identities=15% Similarity=0.153 Sum_probs=60.6
Q ss_pred cccCCCCCCcE-EecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHH---HHHHHHHhhCCcEEEEEeCCCh-
Q 024977 70 ANVGDLLGDFS-IFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASAL---KESKARFDSAGVKLIAVGVGTP- 144 (259)
Q Consensus 70 ~~vG~~aPdf~-l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L---~~~~~~~~~~gv~vv~Vs~~~~- 144 (259)
...|..+|+|. +.+.++....+++..++ ++||. |+++||++|+...+.+ .++.+++. ++.++.|..+..
T Consensus 4 ~~~~~~~~~f~~~~~~~~~~~~l~~~~~k---~vlv~-F~a~wC~~C~~~~~~~~~~~~l~~~~~--~~~~~~vd~~~~~ 77 (134)
T 2fwh_A 4 TAQTQTHLNFTQIKTVDELNQALVEAKGK---PVMLD-LYADWCVACKEFEKYTFSDPQVQKALA--DTVLLQANVTAND 77 (134)
T ss_dssp ------CCCCEECCSHHHHHHHHHHHTTS---CEEEE-EECTTCHHHHHHHHHTTTSHHHHHHTT--TSEEEEEECTTCC
T ss_pred ccccccCCCcEEecCHHHHHHHHHHhcCC---cEEEE-EECCCCHHHHHHHHHhcCCHHHHHHhc--CcEEEEEeCCCCc
Confidence 35678899998 55566666677777653 55555 5599999999999888 77777764 699999988653
Q ss_pred HHHHHHHhh---CCCCCCCcccCCchHH
Q 024977 145 NKAQILAER---LPFPMDCLYADPDRKV 169 (259)
Q Consensus 145 ~~~~~f~~~---~~fp~~~ll~D~~~~~ 169 (259)
+....+.+. .++|.- ++.|.+|++
T Consensus 78 ~~~~~l~~~~~v~~~Pt~-~~~d~~G~~ 104 (134)
T 2fwh_A 78 AQDVALLKHLNVLGLPTI-LFFDGQGQE 104 (134)
T ss_dssp HHHHHHHHHTTCCSSSEE-EEECTTSCB
T ss_pred chHHHHHHHcCCCCCCEE-EEECCCCCE
Confidence 334445543 245532 677888765
No 113
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=98.47 E-value=1.5e-06 Score=64.51 Aligned_cols=39 Identities=15% Similarity=0.216 Sum_probs=31.8
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGV 141 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~ 141 (259)
+.+|++|++.||+.|+...+.|.++..++. ++.++.|..
T Consensus 25 k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~--~~~~~~vd~ 63 (109)
T 3f3q_A 25 KLVVVDFYATWCGPCKMIAPMIEKFSEQYP--QADFYKLDV 63 (109)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEET
T ss_pred CEEEEEEECCcCHhHHHHHHHHHHHHHHCC--CCEEEEEEC
Confidence 566666679999999999999999988874 477777764
No 114
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=98.47 E-value=1.7e-06 Score=63.54 Aligned_cols=40 Identities=13% Similarity=0.204 Sum_probs=32.8
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG 142 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~ 142 (259)
+.+|++|+++||+.|+...+.+.++..++ .++.++.|..+
T Consensus 19 ~~vlv~f~a~wC~~C~~~~p~~~~~~~~~--~~~~~~~vd~~ 58 (105)
T 4euy_A 19 QLVLLFIKTENCGVCDVMLRKVNYVLENY--NYVEKIEILLQ 58 (105)
T ss_dssp SEEEEEEEESSCHHHHHHHHHHHHHHHTC--TTEEEEEEEEC
T ss_pred CCEEEEEeCCCCcchHHHHHHHHHHHHHc--CCceEEEEECC
Confidence 56777777999999999999999998887 36777777654
No 115
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=98.46 E-value=3.2e-06 Score=61.60 Aligned_cols=41 Identities=20% Similarity=0.212 Sum_probs=31.8
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG 142 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~ 142 (259)
+.+|++|++.||+.|+...+.|.++..++.+ .+.++.|..+
T Consensus 18 ~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~-~v~~~~v~~~ 58 (105)
T 1nsw_A 18 GPVLVDFWAAWCGPCRMMAPVLEEFAEAHAD-KVTVAKLNVD 58 (105)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHHSTT-TCEEEEEETT
T ss_pred CcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CcEEEEEECc
Confidence 4555556699999999999999998888754 3777777643
No 116
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=98.46 E-value=3.9e-06 Score=61.05 Aligned_cols=41 Identities=17% Similarity=0.302 Sum_probs=32.6
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG 142 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~ 142 (259)
+.+|++|++.||+.|+...+.+.++..++.+. +.++.|..+
T Consensus 20 ~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~ 60 (106)
T 3die_A 20 GVQLVDFWATACGPCKMIAPVLEELAADYEGK-ADILKLDVD 60 (106)
T ss_dssp SEEEEEEECSBCHHHHHHHHHHHHHHHHTTTT-CEEEEEETT
T ss_pred CcEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEECC
Confidence 45556666999999999999999999888643 777777753
No 117
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=98.46 E-value=2.5e-06 Score=64.96 Aligned_cols=39 Identities=18% Similarity=0.232 Sum_probs=32.0
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGV 141 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~ 141 (259)
+.+|++|+++||+.|+...+.|.++..++. ++.++.|..
T Consensus 39 k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--~v~~~~vd~ 77 (124)
T 1xfl_A 39 TLVVVDFTASWCGPCRFIAPFFADLAKKLP--NVLFLKVDT 77 (124)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHHHHHHCS--SEEEEEEET
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHHCC--CcEEEEEEC
Confidence 566666669999999999999999988874 677777764
No 118
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=98.45 E-value=3.6e-06 Score=62.65 Aligned_cols=38 Identities=24% Similarity=0.252 Sum_probs=30.1
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEe
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVG 140 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs 140 (259)
++||+.|+++||++|+...|.+.++..++. ++.++.|.
T Consensus 21 k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~--~~~~~~vd 58 (105)
T 3zzx_A 21 KLVVIDFYATWCGPCKMIAPKLEELSQSMS--DVVFLKVD 58 (105)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHCT--TEEEEEEE
T ss_pred CEEEEEEECCCCCCccCCCcchhhhhhccC--CeEEEEEe
Confidence 677777779999999999999999887663 45555554
No 119
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=98.44 E-value=2.3e-06 Score=63.60 Aligned_cols=42 Identities=19% Similarity=0.200 Sum_probs=33.9
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGT 143 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~ 143 (259)
+.+|++|++.||+.|+...+.|.++.+++.+ ++.++.|..+.
T Consensus 18 ~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~-~v~~~~vd~~~ 59 (112)
T 2voc_A 18 GVVLADFWAPWCGPSKMIAPVLEELDQEMGD-KLKIVKIDVDE 59 (112)
T ss_dssp SEEEEEEECTTBGGGGGHHHHHHHHHHHHTT-TCEEEEEETTT
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHHhCC-CcEEEEEECCC
Confidence 5566666699999999999999999988864 68888887543
No 120
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=98.44 E-value=3.9e-07 Score=68.90 Aligned_cols=58 Identities=17% Similarity=0.139 Sum_probs=41.8
Q ss_pred ecCCCCeEeccc-ccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCC
Q 024977 82 FTAAGEPVLFKD-LWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGT 143 (259)
Q Consensus 82 ~d~~G~~v~lsd-l~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~ 143 (259)
.+.+|+...+.+ +... ++.+|++|++.||+.|+...+.|.++..++ .++.++.|..+.
T Consensus 6 ~~~~g~~~~~~~~~~~~--~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~--~~v~~~~vd~~~ 64 (118)
T 2f51_A 6 VHFNGTHEALLNRIKEA--PGLVLVDFFATWCGPCQRLGQILPSIAEAN--KDVTFIKVDVDK 64 (118)
T ss_dssp EEECSCHHHHHHHHHHC--SSCEEEEEECTTCHHHHHHHHHHHHHHHHC--TTSEEEEEETTT
T ss_pred eEecCCHHHHHHHHHhC--CCEEEEEEECCCCHHHHHHHHHHHHHHHHC--CCeEEEEEECCC
Confidence 344566666663 4332 245666666999999999999999998887 678888887643
No 121
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=98.42 E-value=4e-06 Score=61.87 Aligned_cols=41 Identities=15% Similarity=0.358 Sum_probs=32.4
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG 142 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~ 142 (259)
+.+|++|++.||+.|+...+.|.++..++.. .+.++.|..+
T Consensus 24 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~ 64 (112)
T 1t00_A 24 KPVLVDFWAAWCGPCRQIAPSLEAIAAEYGD-KIEIVKLNID 64 (112)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETT
T ss_pred CeEEEEEECCCCHhHHhcCHHHHHHHHHhcC-CeEEEEEEcC
Confidence 4555566699999999999999999888754 4788877754
No 122
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.41 E-value=2.9e-06 Score=64.57 Aligned_cols=42 Identities=19% Similarity=0.185 Sum_probs=34.0
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhh---CCcEEEEEeCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDS---AGVKLIAVGVG 142 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~---~gv~vv~Vs~~ 142 (259)
+.+|++|++.||+.|+...+.|.++..++.+ .++.++.|..+
T Consensus 26 ~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~ 70 (133)
T 1x5d_A 26 DVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDAT 70 (133)
T ss_dssp SEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETT
T ss_pred CeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECC
Confidence 5666677799999999999999999988863 45777777754
No 123
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=98.41 E-value=1.8e-07 Score=72.45 Aligned_cols=84 Identities=17% Similarity=0.120 Sum_probs=58.2
Q ss_pred EecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCChHHHHHHHhhCCCCCCC
Q 024977 81 IFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTPNKAQILAERLPFPMDC 160 (259)
Q Consensus 81 l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~~~~~~f~~~~~fp~~~ 160 (259)
+.+.+|..+.++++.++ ++||.| ++.||++|+...+.|.++..++.. .+.++.|..+....+.+--.-.++|.-
T Consensus 36 l~~~~~~~~~l~~~~~k---~vlv~f-~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~- 109 (141)
T 3hxs_A 36 IADYENHSKEWKYLGDK---PAIVDF-YADWCGPCKMVAPILEELSKEYAG-KIYIYKVNVDKEPELARDFGIQSIPTI- 109 (141)
T ss_dssp TCCCSSCCCCCCCCCSS---CEEEEE-ECTTCTTHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHTTCCSSSEE-
T ss_pred hhccccchhHHHHhCCC---EEEEEE-ECCCCHHHHHHHHHHHHHHHHhcC-ceEEEEEECCCCHHHHHHcCCCCcCEE-
Confidence 45667888888888764 555555 599999999999999999988864 588999988765432211111345532
Q ss_pred cccCCchHHH
Q 024977 161 LYADPDRKVY 170 (259)
Q Consensus 161 ll~D~~~~~~ 170 (259)
++.|.++.+.
T Consensus 110 ~~~~~~g~~~ 119 (141)
T 3hxs_A 110 WFVPMKGEPQ 119 (141)
T ss_dssp EEECSSSCCE
T ss_pred EEEeCCCCEE
Confidence 6677776643
No 124
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=98.41 E-value=2.4e-06 Score=63.00 Aligned_cols=41 Identities=17% Similarity=0.250 Sum_probs=32.3
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG 142 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~ 142 (259)
+.+|++|++.||+.|+...+.|.++..++.. ++.++.|..+
T Consensus 25 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~ 65 (112)
T 1ep7_A 25 KPIVVDFTATWCGPCKMIAPLFETLSNDYAG-KVIFLKVDVD 65 (112)
T ss_dssp CCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETT
T ss_pred CeEEEEEECCCCHHHHHHHHHHHHHHHHcCC-CeEEEEEECC
Confidence 3455555589999999999999999888754 6888888753
No 125
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=98.40 E-value=2.9e-06 Score=67.44 Aligned_cols=41 Identities=15% Similarity=0.294 Sum_probs=32.9
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG 142 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~ 142 (259)
+.+|++|++.||++|+...+.|.++..++.. .+.++.|..+
T Consensus 65 ~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~~ 105 (155)
T 2ppt_A 65 LPLLVDFWAPWCGPCRQMAPQFQAAAATLAG-QVRLAKIDTQ 105 (155)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETT
T ss_pred CcEEEEEECCCCHHHHHHHHHHHHHHHHccC-CEEEEEEeCC
Confidence 4555555699999999999999999988864 4888888754
No 126
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=98.40 E-value=2.6e-06 Score=64.26 Aligned_cols=40 Identities=15% Similarity=0.189 Sum_probs=31.3
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG 142 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~ 142 (259)
+.+|+.|+++||++|+...+.+.++.+++. ++.++.|..+
T Consensus 38 ~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~--~~~~~~vd~~ 77 (124)
T 1faa_A 38 KPVVLDMFTQWCGPCKAMAPKYEKLAEEYL--DVIFLKLDCN 77 (124)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECS
T ss_pred CEEEEEEECCcCHhHHHHhHHHHHHHHHCC--CCEEEEEecC
Confidence 344445559999999999999999988774 5888877754
No 127
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=98.39 E-value=8e-06 Score=59.43 Aligned_cols=41 Identities=22% Similarity=0.230 Sum_probs=32.6
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG 142 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~ 142 (259)
+.+|++|++.||+.|+...+.|.++..++.. ++.++.|..+
T Consensus 21 ~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~ 61 (107)
T 2i4a_A 21 GLVLVDFWAEWCGPCKMIGPALGEIGKEFAG-KVTVAKVNID 61 (107)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHHTT-SEEEEEEETT
T ss_pred CEEEEEEECCCChhHHHHhHHHHHHHHHhCC-cEEEEEEECC
Confidence 4555555699999999999999999888864 6778777744
No 128
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=98.39 E-value=4.9e-06 Score=60.87 Aligned_cols=41 Identities=15% Similarity=0.234 Sum_probs=32.3
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG 142 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~ 142 (259)
+.+|++|++.||+.|+...+.|.++..++.. .+.++.|..+
T Consensus 21 ~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~ 61 (108)
T 2trx_A 21 GAILVDFWAEWCGPCKMIAPILDEIADEYQG-KLTVAKLNID 61 (108)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETT
T ss_pred CeEEEEEECCCCHhHHHHHHHHHHHHHHhCC-CcEEEEEECC
Confidence 5666666799999999999999999888754 4777777643
No 129
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=98.39 E-value=1.4e-06 Score=65.57 Aligned_cols=40 Identities=15% Similarity=0.167 Sum_probs=32.4
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG 142 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~ 142 (259)
+.+|+.|++.||+.|+...+.|.++..++.+ +.++.|..+
T Consensus 32 k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~--v~~~~vd~d 71 (116)
T 3qfa_C 32 KLVVVDFSATWCGPSKMIKPFFHSLSEKYSN--VIFLEVDVD 71 (116)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHTTCTT--SEEEEEETT
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECC
Confidence 5566666699999999999999999887744 888887754
No 130
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=98.39 E-value=2.2e-06 Score=63.46 Aligned_cols=43 Identities=9% Similarity=0.158 Sum_probs=33.2
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGT 143 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~ 143 (259)
+.+|++|+++||+.|+...+.|.++..+++..++.++.|..+.
T Consensus 22 ~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~ 64 (112)
T 3d6i_A 22 KLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADE 64 (112)
T ss_dssp CCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTT
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEeccc
Confidence 4556666699999999999999999988766678888887654
No 131
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=98.38 E-value=2.3e-06 Score=63.27 Aligned_cols=40 Identities=13% Similarity=0.094 Sum_probs=32.0
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG 142 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~ 142 (259)
+.+|+.|+++||+.|+...+.|.++..++. ++.++.|..+
T Consensus 25 ~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~ 64 (111)
T 2pu9_C 25 KPVVLDMFTQWCGPSKAMAPKYEKLAEEYL--DVIFLKLDCN 64 (111)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECS
T ss_pred CEEEEEEECCcCHhHHHHCHHHHHHHHHCC--CeEEEEEecC
Confidence 445555568999999999999999988774 5888888754
No 132
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=98.38 E-value=5.7e-06 Score=62.19 Aligned_cols=41 Identities=22% Similarity=0.248 Sum_probs=32.1
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG 142 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~ 142 (259)
+.+|++|++.||+.|+...+.|.++..++.. ++.++.|..+
T Consensus 32 k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~-~v~~~~vd~d 72 (119)
T 1w4v_A 32 TPVVVDFHAQWCGPCKILGPRLEKMVAKQHG-KVVMAKVDID 72 (119)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-SSEEEEEETT
T ss_pred CcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCC
Confidence 4455555599999999999999999888754 5888877754
No 133
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=98.38 E-value=6.3e-07 Score=67.48 Aligned_cols=41 Identities=20% Similarity=0.278 Sum_probs=31.6
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGT 143 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~ 143 (259)
+.+|++|++.||+.|+...+.|.++..++.+ +.++.|..+.
T Consensus 35 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~vd~~~ 75 (122)
T 2vlu_A 35 KLVVIDFTASWCGPCRIMAPVFADLAKKFPN--AVFLKVDVDE 75 (122)
T ss_dssp CCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTT
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--cEEEEEECCC
Confidence 3455555599999999999999999887753 8888777543
No 134
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=98.37 E-value=3e-06 Score=66.42 Aligned_cols=41 Identities=17% Similarity=0.185 Sum_probs=33.5
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG 142 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~ 142 (259)
+.||+.|+++||++|+...|.|.++.++++. .+.++.|..+
T Consensus 24 k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~d 64 (142)
T 1qgv_A 24 RVVVIRFGHDWDPTCMKMDEVLYSIAEKVKN-FAVIYLVDIT 64 (142)
T ss_dssp SEEEEEEECTTSHHHHHHHHHHHHHHHHHTT-TEEEEEEETT
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHHhCC-CeEEEEEccc
Confidence 5666677799999999999999999988753 4777777754
No 135
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=98.36 E-value=2.5e-06 Score=65.81 Aligned_cols=40 Identities=15% Similarity=0.201 Sum_probs=32.1
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG 142 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~ 142 (259)
+.+|++|++.||+.|+...+.|.++..++ .++.++.|..+
T Consensus 47 k~vvv~f~a~wC~~C~~~~~~l~~l~~~~--~~v~~~~v~~~ 86 (139)
T 3d22_A 47 KIVLANFSARWCGPSRQIAPYYIELSENY--PSLMFLVIDVD 86 (139)
T ss_dssp CCEEEEEECTTCHHHHHHHHHHHHHHHHC--TTSEEEEEETT
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHHC--CCCEEEEEeCc
Confidence 34555556899999999999999998887 36888888754
No 136
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=98.36 E-value=1.3e-06 Score=66.04 Aligned_cols=42 Identities=17% Similarity=0.143 Sum_probs=34.3
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG 142 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~ 142 (259)
+.+|++|++.||+.|+...+.|.++.+++...++.++.|..+
T Consensus 34 k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d 75 (121)
T 2j23_A 34 KVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVD 75 (121)
T ss_dssp SCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETT
T ss_pred CEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECc
Confidence 455556669999999999999999988887767888888754
No 137
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=98.36 E-value=2.5e-06 Score=64.82 Aligned_cols=41 Identities=10% Similarity=0.053 Sum_probs=26.2
Q ss_pred cEEEEEEcCCCCHhhHHHHHHH---HHHHHHHhhCCcEEEEEeCC
Q 024977 101 VAVVALLRHFGCPCCWELASAL---KESKARFDSAGVKLIAVGVG 142 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L---~~~~~~~~~~gv~vv~Vs~~ 142 (259)
+.+|+.|++.||+.|+...+.+ .++.+.+ ..++.++.|..+
T Consensus 28 k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~-~~~~~~~~vd~~ 71 (130)
T 2kuc_A 28 KLLFVDCFTTWCGPCKRLSKVVFKDSLVADYF-NRHFVNLKMDME 71 (130)
T ss_dssp SCEEEEECCTTCTHHHHHHHHGGGCHHHHHHH-HHHSEEEEECSS
T ss_pred CeEEEEEECCCCccHHHHHHHhcCcHHHHHHH-hcCeEEEEEecC
Confidence 4555566699999999999988 4444333 234555555433
No 138
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=98.35 E-value=7.2e-06 Score=60.48 Aligned_cols=42 Identities=10% Similarity=0.261 Sum_probs=33.0
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGT 143 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~ 143 (259)
+.+|++|++.||+.|+...+.|.++..++.. .+.++.|..+.
T Consensus 26 ~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~v~~~~v~~~~ 67 (115)
T 1thx_A 26 QPVLVYFWASWCGPCQLMSPLINLAANTYSD-RLKVVKLEIDP 67 (115)
T ss_dssp SCEEEEEECTTCTTHHHHHHHHHHHHHHTTT-TCEEEEEESTT
T ss_pred ceEEEEEECCCCHHHHHhHHHHHHHHHHhCC-cEEEEEEEcCC
Confidence 4555555699999999999999999888764 38888887543
No 139
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=98.35 E-value=9.1e-06 Score=58.50 Aligned_cols=40 Identities=18% Similarity=0.181 Sum_probs=32.4
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG 142 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~ 142 (259)
+.+|++|++.||+.|+...+.+.++..++.+ +.++.|..+
T Consensus 17 ~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~v~~~ 56 (104)
T 2e0q_A 17 EIAVVDFWAEWCAPCLILAPIIEELAEDYPQ--VGFGKLNSD 56 (104)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETT
T ss_pred CcEEEEEECCCChhHHHHhHHHHHHHHHcCC--ceEEEEECC
Confidence 5566666699999999999999999888754 888888754
No 140
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=98.33 E-value=3.9e-06 Score=64.33 Aligned_cols=41 Identities=12% Similarity=0.145 Sum_probs=33.4
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG 142 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~ 142 (259)
+.+|++|++.||+.|+...+.|.++.+++.+ ++.++.|..+
T Consensus 41 k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~~ 81 (128)
T 2o8v_B 41 GAILVDFWAEWCGPAKMIAPILDEIADEYQG-KLTVAKLNID 81 (128)
T ss_dssp SEEEEEEECSSCHHHHHTHHHHHHHHHHTTT-TEEEEEEETT
T ss_pred CEEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECC
Confidence 5666677799999999999999999888754 4778877754
No 141
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=98.32 E-value=6.5e-06 Score=60.62 Aligned_cols=40 Identities=25% Similarity=0.395 Sum_probs=32.4
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG 142 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~ 142 (259)
+.+|++|++.||+.|....+.|+++..++. ++.++.|..+
T Consensus 27 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~ 66 (113)
T 1ti3_A 27 KLIVVDFTASWCPPCKMIAPIFAELAKKFP--NVTFLKVDVD 66 (113)
T ss_dssp SEEEEEEECSSCHHHHHHHHHHHHHHHHCS--SEEEEEEETT
T ss_pred CeEEEEEECCCCHHHHHHHHHHHHHHHhCC--CcEEEEEEcc
Confidence 566666679999999999999999888774 6778777753
No 142
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=98.31 E-value=1.4e-05 Score=58.14 Aligned_cols=41 Identities=17% Similarity=0.252 Sum_probs=32.4
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG 142 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~ 142 (259)
+.+|++|++.||+.|+...+.|.++..++.. ++.++.|..+
T Consensus 19 ~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~ 59 (109)
T 2yzu_A 19 PLVLVDFWAEWCAPCRMIAPILEEIAKEYEG-KLLVAKLDVD 59 (109)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETT
T ss_pred CeEEEEEECCCCHHHHHhhHHHHHHHHHhhC-ceEEEEEECC
Confidence 4555566699999999999999999888753 4777777754
No 143
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=98.30 E-value=5.2e-06 Score=61.68 Aligned_cols=40 Identities=23% Similarity=0.343 Sum_probs=31.6
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG 142 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~ 142 (259)
+.+|++|++.||+.|+...+.|.++..++. ++.++.|..+
T Consensus 29 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~ 68 (118)
T 2vm1_A 29 KLVIIDFTASWCGPCRVIAPVFAEYAKKFP--GAIFLKVDVD 68 (118)
T ss_dssp CCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETT
T ss_pred CEEEEEEECCCCHhHHHHhHHHHHHHHHCC--CcEEEEEEcc
Confidence 445555558999999999999999988775 6888877753
No 144
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.30 E-value=1.6e-05 Score=57.95 Aligned_cols=40 Identities=13% Similarity=0.121 Sum_probs=31.8
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGV 141 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~ 141 (259)
+.+|++|++.||+.|....+.|.++..++.. .+.++.|..
T Consensus 22 ~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~ 61 (109)
T 3tco_A 22 KLVLVDCWAEWCAPCHLYEPIYKKVAEKYKG-KAVFGRLNV 61 (109)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEET
T ss_pred CeEEEEEECCCCHHHHhhhHHHHHHHHHhCC-CceEEEEcc
Confidence 5566666699999999999999999988754 477776664
No 145
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=98.29 E-value=9.3e-06 Score=64.01 Aligned_cols=42 Identities=12% Similarity=0.173 Sum_probs=34.0
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCCh
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTP 144 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~ 144 (259)
+.+|++|++.||+.|+...+.|.++..++ .++.++.|..+..
T Consensus 33 ~~vvv~F~a~wC~~C~~~~p~l~~l~~~~--~~v~~~~vd~~~~ 74 (153)
T 2wz9_A 33 SLLVVHFWAPWAPQCAQMNEVMAELAKEL--PQVSFVKLEAEGV 74 (153)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHHC--TTSEEEEEETTTS
T ss_pred CeEEEEEECCCCHhHHHHHHHHHHHHHHc--CCeEEEEEECCCC
Confidence 45555666999999999999999998876 4788888887653
No 146
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.27 E-value=6.3e-06 Score=63.39 Aligned_cols=43 Identities=9% Similarity=0.192 Sum_probs=35.1
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCC--cEEEEEeCCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAG--VKLIAVGVGT 143 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~g--v~vv~Vs~~~ 143 (259)
+.+|++|++.||+.|+...+.|.++..++...+ +.++.|..+.
T Consensus 35 ~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~ 79 (140)
T 2dj1_A 35 DTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATS 79 (140)
T ss_dssp SEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTT
T ss_pred CeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcc
Confidence 677777789999999999999999999987764 6666666544
No 147
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=98.26 E-value=1.6e-05 Score=58.28 Aligned_cols=41 Identities=17% Similarity=0.402 Sum_probs=32.2
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG 142 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~ 142 (259)
+.+|++|++.||+.|+...+.+.++..++.+ .+.++.|..+
T Consensus 23 ~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~ 63 (111)
T 3gnj_A 23 KACLVMFSRKNCHVCQKVTPVLEELRLNYEE-SFGFYYVDVE 63 (111)
T ss_dssp CCEEEEEECSSCHHHHHHHHHHHHHHHHTTT-TSEEEEEETT
T ss_pred CEEEEEEeCCCChhHHHHHHHHHHHHHHcCC-ceEEEEEECC
Confidence 4555555699999999999999999888753 4778777754
No 148
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=98.24 E-value=9.6e-06 Score=59.44 Aligned_cols=40 Identities=20% Similarity=0.374 Sum_probs=32.2
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG 142 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~ 142 (259)
+.+|++|+++||+.|+...+.|.++..++ .++.++.|..+
T Consensus 22 ~~v~v~f~a~wC~~C~~~~~~~~~~~~~~--~~~~~~~vd~~ 61 (107)
T 1gh2_A 22 RLAVVKFTMRGCGPCLRIAPAFSSMSNKY--PQAVFLEVDVH 61 (107)
T ss_dssp SCEEEEEECSSCHHHHHHHHHHHHHHHHC--TTSEEEEEETT
T ss_pred CEEEEEEECCCChhhHHHHHHHHHHHHHC--CCcEEEEEECc
Confidence 45566666999999999999999998887 36888877754
No 149
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=98.22 E-value=9.4e-06 Score=60.75 Aligned_cols=39 Identities=15% Similarity=0.305 Sum_probs=28.8
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG 142 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~ 142 (259)
+.+|++|+++|||+|+...|.|.++..++. ..++.+..+
T Consensus 30 ~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~---~~v~~~~~~ 68 (118)
T 1zma_A 30 ETATFFIGRKTCPYCRKFAGTLSGVVAETK---AHIYFINSE 68 (118)
T ss_dssp CCEEEEEECTTCHHHHHHHHHHHHHHHHHC---CCCEEEETT
T ss_pred CeEEEEEECCCCccHHHHHHHHHHHHHhcC---CeEEEEECC
Confidence 455666669999999999999999887653 345555543
No 150
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=98.22 E-value=1.9e-05 Score=61.20 Aligned_cols=41 Identities=17% Similarity=0.386 Sum_probs=32.7
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG 142 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~ 142 (259)
+.+|++|++.||+.|+...+.|.++..++.. .+.++.|..+
T Consensus 25 ~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~ 65 (140)
T 3hz4_A 25 KPVVVMFYSPACPYCKAMEPYFEEYAKEYGS-SAVFGRINIA 65 (140)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TSEEEEEETT
T ss_pred CcEEEEEECCCChhHHHHHHHHHHHHHHhCC-ceEEEEEECC
Confidence 4555555699999999999999999988864 4888877754
No 151
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=98.21 E-value=1.2e-05 Score=58.90 Aligned_cols=42 Identities=21% Similarity=0.185 Sum_probs=31.7
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhC--CcEEEEEeCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSA--GVKLIAVGVG 142 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~--gv~vv~Vs~~ 142 (259)
+.+|+.|++.||+.|+...+.+.++..++... ++.++.|..+
T Consensus 22 ~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~ 65 (111)
T 3uvt_A 22 GITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCT 65 (111)
T ss_dssp SEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETT
T ss_pred CcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEecc
Confidence 45566666999999999999999998776443 5666666643
No 152
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=98.19 E-value=3.2e-06 Score=65.29 Aligned_cols=40 Identities=18% Similarity=0.283 Sum_probs=32.3
Q ss_pred EEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCCh
Q 024977 102 AVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTP 144 (259)
Q Consensus 102 vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~ 144 (259)
.+|+.|+++||++|+...|.|.++..++. +.++.|..++.
T Consensus 33 ~vlv~F~a~wC~~C~~~~p~l~~l~~~~~---v~~~~vd~~~~ 72 (135)
T 3emx_A 33 DAILAVYSKTCPHCHRDWPQLIQASKEVD---VPIVMFIWGSL 72 (135)
T ss_dssp SEEEEEEETTCHHHHHHHHHHHHHHTTCC---SCEEEEEECTT
T ss_pred cEEEEEECCcCHhhhHhChhHHHHHHHCC---CEEEEEECCCc
Confidence 45666669999999999999999887664 88888877553
No 153
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=98.19 E-value=3.3e-05 Score=57.53 Aligned_cols=41 Identities=17% Similarity=0.200 Sum_probs=32.1
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG 142 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~ 142 (259)
+.+|++|++.||+.|+...+.|.++..++.. ++.++.|..+
T Consensus 31 ~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~ 71 (121)
T 2i1u_A 31 KPVLVDFWATWCGPCKMVAPVLEEIATERAT-DLTVAKLDVD 71 (121)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETT
T ss_pred CcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEECC
Confidence 4455555699999999999999999888753 5788877754
No 154
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.18 E-value=4.5e-06 Score=72.38 Aligned_cols=42 Identities=14% Similarity=0.245 Sum_probs=34.1
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGT 143 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~ 143 (259)
+.||+.||++||++|+...|.+.++..++.. .+.++.|..+.
T Consensus 27 ~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~ 68 (287)
T 3qou_A 27 TPVLFYFWSERSQHCLQLTPILESLAAQYNG-QFILAKLDCDA 68 (287)
T ss_dssp SCEEEEEECTTCTTTTTTHHHHHHHHHHHTS-SSEEEEEETTT
T ss_pred CeEEEEEECCCChHHHHHHHHHHHHHHHcCC-CeEEEEEeCcc
Confidence 5666666799999999999999999988863 48888887553
No 155
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=98.15 E-value=8.7e-06 Score=68.30 Aligned_cols=43 Identities=14% Similarity=0.217 Sum_probs=34.8
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCCh
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTP 144 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~ 144 (259)
+.+|+.|+++||++|+...+.|.++..++.. .+.++.|..+..
T Consensus 31 k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~d~~ 73 (222)
T 3dxb_A 31 GAILVDFWAEWCGPCKMIAPILDEIADEYQG-KLTVAKLNIDQN 73 (222)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC
T ss_pred CEEEEEEECCcCHHHHHHHHHHHHHHHHhcC-CcEEEEEECCCC
Confidence 5555566699999999999999999998864 388888887653
No 156
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=98.15 E-value=3.5e-05 Score=59.45 Aligned_cols=41 Identities=17% Similarity=0.225 Sum_probs=33.0
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGT 143 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~ 143 (259)
+ +|++|++.||+.|....+.|.++..++.. ++.++.|..+.
T Consensus 52 ~-vvv~f~~~~C~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~ 92 (140)
T 1v98_A 52 L-TLVDFFAPWCGPCRLVSPILEELARDHAG-RLKVVKVNVDE 92 (140)
T ss_dssp E-EEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTT
T ss_pred C-EEEEEECCCCHHHHHHHHHHHHHHHHccC-ceEEEEEECCC
Confidence 5 66666699999999999999999988764 47787777543
No 157
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=98.09 E-value=2.9e-06 Score=68.70 Aligned_cols=66 Identities=17% Similarity=0.238 Sum_probs=44.5
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCChH-HHHHHHh--hCCCCCCCcccCCchHH
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTPN-KAQILAE--RLPFPMDCLYADPDRKV 169 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~~-~~~~f~~--~~~fp~~~ll~D~~~~~ 169 (259)
+++|+.||++|||+|+.++|.|.+++.++. ++.++.|+.+... .+.+|.+ -.++|.- ++.|.+|.+
T Consensus 55 k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~--~v~~~~v~~d~~~~~~~~~~~~~v~~iPt~-i~~~~~G~~ 123 (167)
T 1z6n_A 55 RYRLLVAGEMWCPDCQINLAALDFAQRLQP--NIELAIISKGRAEDDLRQRLALERIAIPLV-LVLDEEFNL 123 (167)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHCT--TEEEEEECHHHHHHHTTTTTTCSSCCSSEE-EEECTTCCE
T ss_pred CEEEEEEECCCChhHHHHHHHHHHHHHHCC--CcEEEEEECCCCHHHHHHHHHcCCCCcCeE-EEECCCCCE
Confidence 567777889999999999999999987763 6888888765422 2233432 1244532 566665444
No 158
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=98.07 E-value=4.4e-06 Score=65.99 Aligned_cols=65 Identities=12% Similarity=0.093 Sum_probs=44.6
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCChHHHHHHHhhCCCCCCCcccCCchH
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTPNKAQILAERLPFPMDCLYADPDRK 168 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~~~~~~f~~~~~fp~~~ll~D~~~~ 168 (259)
+.||+.||++||++|+.+.|.|.++.+++.+. +.++.|..+....+..--.-.++|. ++.+.+|.
T Consensus 24 k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~-~~~~~vd~d~~~~l~~~~~v~~~Pt--~~~~~~G~ 88 (149)
T 3gix_A 24 KVLVLRFGRDEDPVCLQLDDILSKTSSDLSKM-AAIYLVDVDQTAVYTQYFDISYIPS--TVFFFNGQ 88 (149)
T ss_dssp SEEEEEEECTTSHHHHHHHHHHHHHHTTTTTT-EEEEEEETTTCCHHHHHTTCCSSSE--EEEEETTE
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHHccCc-eEEEEEECCcCHHHHHHcCCCccCe--EEEEECCe
Confidence 56777777999999999999999999887543 8888898876543222111235563 34555554
No 159
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=98.07 E-value=7.1e-06 Score=63.24 Aligned_cols=66 Identities=15% Similarity=0.170 Sum_probs=46.0
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCChHHH-HHHHhhCCCCCCCcccCCchHH
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTPNKA-QILAERLPFPMDCLYADPDRKV 169 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~~~~-~~f~~~~~fp~~~ll~D~~~~~ 169 (259)
+.+|++|++.||+.|+...+.|.++..++.. ++.++.|..+....+ ++| .-.++|.- ++.|.+|..
T Consensus 39 k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~~~l~~~~-~v~~~Pt~-~~~~~~G~~ 105 (136)
T 2l5l_A 39 KPAIVDFYADWCGPCKMVAPILDELAKEYDG-QIVIYKVDTEKEQELAGAF-GIRSIPSI-LFIPMEGKP 105 (136)
T ss_dssp SCEEEEEECTTSHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHT-TCCSSCEE-EEECSSSCC
T ss_pred CEEEEEEECCcCHHHHHHHHHHHHHHHHhcC-CEEEEEEeCCCCHHHHHHc-CCCCCCEE-EEECCCCcE
Confidence 4555555699999999999999999888754 589999988765432 222 12345532 667777764
No 160
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=98.06 E-value=1.2e-05 Score=62.03 Aligned_cols=38 Identities=18% Similarity=0.329 Sum_probs=28.9
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGV 141 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~ 141 (259)
+.+|+.|+++||+.|+...+.|.++..++ ++.++.|..
T Consensus 41 k~vvv~F~a~wC~~C~~~~p~l~~l~~~~---~v~~~~vd~ 78 (133)
T 3cxg_A 41 SSIVIKFGAVWCKPCNKIKEYFKNQLNYY---YVTLVDIDV 78 (133)
T ss_dssp SEEEEEEECTTCHHHHHTHHHHHGGGGTE---ECEEEEEET
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHhc---CEEEEEEec
Confidence 46666677999999999999998876554 466666653
No 161
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.06 E-value=6.8e-06 Score=62.64 Aligned_cols=43 Identities=9% Similarity=0.168 Sum_probs=35.1
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhC-CcEEEEEeCCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSA-GVKLIAVGVGT 143 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~-gv~vv~Vs~~~ 143 (259)
+.+|++|++.||++|+...+.|.++..++... ++.++.|..+.
T Consensus 26 ~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~ 69 (133)
T 2dj3_A 26 KDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATA 69 (133)
T ss_dssp SEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTT
T ss_pred CcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCc
Confidence 56777777999999999999999999988753 57777777654
No 162
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=98.06 E-value=3.8e-05 Score=56.80 Aligned_cols=40 Identities=20% Similarity=0.344 Sum_probs=30.4
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG 142 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~ 142 (259)
+.+|++|+++||++|+...+.|.++..++. ++.++.|..+
T Consensus 20 ~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~ 59 (110)
T 2l6c_A 20 SDAIVFFHKNLCPHCKNMEKVLDKFGARAP--QVAISSVDSE 59 (110)
T ss_dssp SEEEEEEECSSCSTHHHHHHHHHHHHTTCT--TSCEEEEEGG
T ss_pred CCEEEEEECCCCHhHHHHHHHHHHHHHHCC--CcEEEEEcCc
Confidence 455666669999999999999998877653 5667766643
No 163
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.05 E-value=7e-06 Score=62.30 Aligned_cols=66 Identities=15% Similarity=0.080 Sum_probs=45.0
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCChHHHHHHHhhCCCCCCCcccCCchH
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTPNKAQILAERLPFPMDCLYADPDRK 168 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~~~~~~f~~~~~fp~~~ll~D~~~~ 168 (259)
+.+|++|++.||+.|+...+.|.++..++.. .+.++.|..+....+..-..-.++|.- ++.|.++.
T Consensus 36 ~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~l~~~~~v~~~Pt~-~~~~~~~~ 101 (130)
T 2dml_A 36 GLWLVEFYAPWCGHCQRLTPEWKKAATALKD-VVKVGAVNADKHQSLGGQYGVQGFPTI-KIFGANKN 101 (130)
T ss_dssp SCEEEEEECTTCSTTGGGHHHHHHHHHHTTT-TSEEEEEETTTCHHHHHHHTCCSSSEE-EEESSCTT
T ss_pred CeEEEEEECCCCHHHHhhCHHHHHHHHHhcC-ceEEEEEeCCCCHHHHHHcCCCccCEE-EEEeCCCC
Confidence 4566666699999999999999999988764 388888988765432221122345532 56676655
No 164
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=98.00 E-value=4e-06 Score=67.14 Aligned_cols=44 Identities=18% Similarity=0.338 Sum_probs=29.8
Q ss_pred CcEEEEEEcCCCCHhhHHHHHHH---HHHHHHHhhCCcEEEEEeCCCh
Q 024977 100 GVAVVALLRHFGCPCCWELASAL---KESKARFDSAGVKLIAVGVGTP 144 (259)
Q Consensus 100 ~~vvL~f~r~~~Cp~C~~~l~~L---~~~~~~~~~~gv~vv~Vs~~~~ 144 (259)
++.||+.||++||++|+...+.+ .++.+.+++ ++.++.|+.+..
T Consensus 47 gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~-~~~~v~v~~d~~ 93 (172)
T 3f9u_A 47 NKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINN-DYVLITLYVDNK 93 (172)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEEETTCC
T ss_pred CCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC-CEEEEEEecCcc
Confidence 35677777899999999863333 333333333 789999988754
No 165
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=97.99 E-value=8.3e-06 Score=61.00 Aligned_cols=43 Identities=21% Similarity=0.203 Sum_probs=34.7
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhh----CCcEEEEEeCCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDS----AGVKLIAVGVGT 143 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~----~gv~vv~Vs~~~ 143 (259)
+.+|+.|++.||++|+...+.|.++..++.. .++.++.|..+.
T Consensus 26 ~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~ 72 (121)
T 2djj_A 26 KDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATA 72 (121)
T ss_dssp SCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTT
T ss_pred CCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcc
Confidence 4555566699999999999999999998875 368888887654
No 166
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.98 E-value=1.9e-05 Score=59.64 Aligned_cols=44 Identities=16% Similarity=0.153 Sum_probs=37.3
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCChH
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTPN 145 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~~ 145 (259)
+ +|+.|+++||+.|+...+.|.++..++...++.++.|..+...
T Consensus 24 ~-vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~ 67 (126)
T 1x5e_A 24 D-WMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQP 67 (126)
T ss_dssp E-EEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCH
T ss_pred C-EEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCH
Confidence 5 5566669999999999999999999887778999999887644
No 167
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=97.98 E-value=1.6e-05 Score=57.96 Aligned_cols=44 Identities=16% Similarity=0.259 Sum_probs=35.2
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCChH
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTPN 145 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~~ 145 (259)
+.+|++|+++||+.|+...+.|.++..++.. .+.++.|..+...
T Consensus 20 ~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~ 63 (107)
T 1dby_A 20 VPVLVDFWAPWCGPCRIIAPVVDEIAGEYKD-KLKCVKLNTDESP 63 (107)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCH
T ss_pred CcEEEEEECCCCHhHHHHHHHHHHHHHHhCC-ceEEEEEECCCCH
Confidence 4555556699999999999999999888754 4889999887643
No 168
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=97.98 E-value=3.4e-05 Score=67.92 Aligned_cols=41 Identities=22% Similarity=0.369 Sum_probs=33.6
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG 142 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~ 142 (259)
+.+|+.|+++||+.|+...|.+.++..++... +.++.|..+
T Consensus 36 ~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~-~~~~~v~~d 76 (298)
T 3ed3_A 36 YTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGV-VQVAAVNCD 76 (298)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-SEEEEEETT
T ss_pred CeEEEEEECCCCHHHHHHHHHHHHHHHHccCC-cEEEEEEcc
Confidence 55666666999999999999999999988643 788888765
No 169
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=97.97 E-value=1.1e-05 Score=60.47 Aligned_cols=43 Identities=14% Similarity=0.190 Sum_probs=35.2
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCChH
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTPN 145 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~~ 145 (259)
+.+|++|++.||+.|+...+.|.++.+++.+ +.++.|..+...
T Consensus 31 k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~--v~~~~vd~~~~~ 73 (114)
T 2oe3_A 31 DKLVIDFYATWCGPCKMMQPHLTKLIQAYPD--VRFVKCDVDESP 73 (114)
T ss_dssp SEEEEEEECTTCHHHHHTHHHHHHHHHHCTT--SEEEEEETTTCH
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCCCH
Confidence 5666666699999999999999999888754 899999877543
No 170
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=97.96 E-value=1.8e-05 Score=58.64 Aligned_cols=43 Identities=19% Similarity=0.219 Sum_probs=35.9
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCChH
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTPN 145 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~~ 145 (259)
+.+|++|++.||+.|+...+.|.++..++. ++.++.|..+...
T Consensus 27 k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~--~v~~~~vd~~~~~ 69 (112)
T 1syr_A 27 ELVIVDFFAEWCGPCKRIAPFYEECSKTYT--KMVFIKVDVDEVS 69 (112)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTTH
T ss_pred CeEEEEEECCCCHHHHHHHHHHHHHHHHcC--CCEEEEEECCCCH
Confidence 566666679999999999999999988774 6999999887644
No 171
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=97.96 E-value=1.5e-05 Score=60.48 Aligned_cols=61 Identities=20% Similarity=0.359 Sum_probs=44.8
Q ss_pred cEEEEEEcCC-------CCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCChHHHHHHHhhCCCCCCCcccCCchHHHHHh
Q 024977 101 VAVVALLRHF-------GCPCCWELASALKESKARFDSAGVKLIAVGVGTPNKAQILAERLPFPMDCLYADPDRKVYNLL 173 (259)
Q Consensus 101 ~vvL~f~r~~-------~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~~~~~~f~~~~~fp~~~ll~D~~~~~~~~~ 173 (259)
+.+++.|+++ ||+.|+...|.|.++.+++.. ++.++.|..++.. .+.|.+..+.+.|
T Consensus 25 ~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~~~~---------------~~~d~~~~~~~~~ 88 (123)
T 1wou_A 25 KTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISE-GCVFIYCQVGEKP---------------YWKDPNNDFRKNL 88 (123)
T ss_dssp SEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCT-TEEEEEEECCCHH---------------HHHCTTCHHHHHH
T ss_pred CEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCC-CcEEEEEECCCch---------------hhhchhHHHHHHC
Confidence 5666666799 999999999999998887743 7888889886532 1335566666667
Q ss_pred CCcc
Q 024977 174 GLYH 177 (259)
Q Consensus 174 Gv~~ 177 (259)
++..
T Consensus 89 ~i~~ 92 (123)
T 1wou_A 89 KVTA 92 (123)
T ss_dssp CCCS
T ss_pred CCCe
Confidence 7653
No 172
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=97.95 E-value=8e-06 Score=61.27 Aligned_cols=69 Identities=13% Similarity=0.020 Sum_probs=46.7
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCChHHHHHHHhhCCCCCCCcccCCchHHHH
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTPNKAQILAERLPFPMDCLYADPDRKVYN 171 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~~~~~~f~~~~~fp~~~ll~D~~~~~~~ 171 (259)
+.+|++|++.||+.|+...+.|.++..++.. ++.++.|..+....+..--.-.++|.- ++.|.++.+.+
T Consensus 22 ~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~-~~~~~~~~~~~ 90 (122)
T 3aps_A 22 THWVVDFYAPWCGPCQNFAPEFELLARMIKG-KVRAGKVDCQAYPQTCQKAGIKAYPSV-KLYQYERAKKS 90 (122)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTCHHHHHHTTCCSSSEE-EEEEEEGGGTE
T ss_pred CeEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCcCCHHHHHHcCCCccceE-EEEeCCCccce
Confidence 4556666699999999999999999988864 699999988765432211111245532 56666665443
No 173
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=97.95 E-value=0.00012 Score=60.83 Aligned_cols=42 Identities=10% Similarity=0.012 Sum_probs=33.7
Q ss_pred CcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhh---CCcEEEEEeC
Q 024977 100 GVAVVALLRHFGCPCCWELASALKESKARFDS---AGVKLIAVGV 141 (259)
Q Consensus 100 ~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~---~gv~vv~Vs~ 141 (259)
++++++.|+++||++|+...+.+.++..++.. .++.++.|..
T Consensus 134 ~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~ 178 (226)
T 1a8l_A 134 QDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEA 178 (226)
T ss_dssp SCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEG
T ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEc
Confidence 47757777799999999999999999988864 3677776654
No 174
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=97.94 E-value=1.2e-05 Score=58.30 Aligned_cols=44 Identities=14% Similarity=0.218 Sum_probs=34.4
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCChH
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTPN 145 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~~ 145 (259)
+.+|++|++.||+.|+...+.+.++..++.. .+.++.|..+...
T Consensus 19 ~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~ 62 (105)
T 1fb6_A 19 VPVMVDFWAPWCGPCKLIAPVIDELAKEYSG-KIAVYKLNTDEAP 62 (105)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCH
T ss_pred CcEEEEEECCCChHHHHHHHHHHHHHHHhcC-ceEEEEEcCcchH
Confidence 3455555599999999999999999888754 4888888877643
No 175
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=97.93 E-value=3.9e-07 Score=73.23 Aligned_cols=88 Identities=15% Similarity=0.151 Sum_probs=51.7
Q ss_pred CCCcEEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCChHH--HHHHHh-
Q 024977 76 LGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTPNK--AQILAE- 152 (259)
Q Consensus 76 aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~~~--~~~f~~- 152 (259)
.+++...+.+ +.+......+ +.||+.|+++||++|+.+.|.|.++.... ..++.++.|..+.... ...|.-
T Consensus 27 ~~~i~w~~~~-~~~~~~~~~~----k~vlv~F~a~WC~~C~~~~p~l~~~~~~~-~~~~~~~~v~~d~~~~~~~~~~~~~ 100 (164)
T 1sen_A 27 GDHIHWRTLE-DGKKEAAASG----LPLMVIIHKSWCGACKALKPKFAESTEIS-ELSHNFVMVNLEDEEEPKDEDFSPD 100 (164)
T ss_dssp CTTSCBCCHH-HHHHHHHHHT----CCEEEEEECTTCHHHHHHHHHHHTCHHHH-HHHTTSEEEEEEGGGSCSCGGGCTT
T ss_pred cccccccCHH-HHHHHHHhcC----CeEEEEEECCCCHHHHHHHHHHHHHHHHh-hcCCeEEEEEecCCchHHHHHhccc
Confidence 3344444333 3344444444 34555556999999999999999865543 3457778877765432 222321
Q ss_pred hCCCCCCCcccCCchHHH
Q 024977 153 RLPFPMDCLYADPDRKVY 170 (259)
Q Consensus 153 ~~~fp~~~ll~D~~~~~~ 170 (259)
...+|.- ++.|.+|.+.
T Consensus 101 ~~~~Pt~-~~~d~~G~~~ 117 (164)
T 1sen_A 101 GGYIPRI-LFLDPSGKVH 117 (164)
T ss_dssp CSCSSEE-EEECTTSCBC
T ss_pred CCcCCeE-EEECCCCCEE
Confidence 1345632 6788887654
No 176
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=97.92 E-value=2.6e-05 Score=56.55 Aligned_cols=44 Identities=23% Similarity=0.234 Sum_probs=35.8
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCChH
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTPN 145 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~~ 145 (259)
+.+|++|++.||+.|+...+.|.++..+++ .++.++.|..+...
T Consensus 21 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~~v~~~~~~ 64 (106)
T 1xwb_A 21 KLVVLDFFATWCGPCKMISPKLVELSTQFA-DNVVVLKVDVDECE 64 (106)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHTT-TTEEEEEEETTTCH
T ss_pred CEEEEEEECCcCHHHHHhhHHHHHHHHHhC-CCeEEEEEeccchH
Confidence 455666669999999999999999988875 57889999887643
No 177
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=97.92 E-value=2.1e-05 Score=56.80 Aligned_cols=43 Identities=16% Similarity=0.203 Sum_probs=35.1
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCChH
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTPN 145 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~~ 145 (259)
+.+|++|++.||+.|+...+.|.++..++. ++.++.|..+...
T Consensus 20 ~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~ 62 (104)
T 2vim_A 20 RLIVVDFFAQWCGPCRNIAPKVEALAKEIP--EVEFAKVDVDQNE 62 (104)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTCH
T ss_pred CeEEEEEECCCCHHHHHhhHHHHHHHHHCC--CCEEEEEeccCCH
Confidence 455555559999999999999999988774 7999999987643
No 178
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=97.86 E-value=5.3e-06 Score=61.53 Aligned_cols=41 Identities=15% Similarity=0.259 Sum_probs=31.3
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhC--CcEEEEEeC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSA--GVKLIAVGV 141 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~--gv~vv~Vs~ 141 (259)
+.+|++|++.||+.|+...+.+.++..+++.. ++.++.|..
T Consensus 25 ~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~ 67 (120)
T 1mek_A 25 KYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDA 67 (120)
T ss_dssp SEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEET
T ss_pred CeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcC
Confidence 56666667999999999999999998888654 355555544
No 179
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=97.84 E-value=2.4e-05 Score=58.32 Aligned_cols=42 Identities=21% Similarity=0.271 Sum_probs=34.0
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCChH
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTPN 145 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~~ 145 (259)
+.+|++|++.||+.|+...+.|.++..++ ++.++.|..+...
T Consensus 34 ~~~vv~f~a~wC~~C~~~~~~~~~~~~~~---~~~~~~vd~~~~~ 75 (117)
T 2xc2_A 34 KLVVVDFFATWCGPCKTIAPLFKELSEKY---DAIFVKVDVDKLE 75 (117)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHTTS---SSEEEEEETTTSH
T ss_pred CEEEEEEECCCCHhHHHHhHHHHHHHHHc---CcEEEEEECCccH
Confidence 45555566999999999999999988766 7889999887643
No 180
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=97.82 E-value=4.3e-05 Score=55.33 Aligned_cols=42 Identities=17% Similarity=0.221 Sum_probs=33.7
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCCh
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTP 144 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~ 144 (259)
+.+|++|++.||+.|+...+.+.++..++. ++.++.|..+..
T Consensus 21 ~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~--~~~~~~vd~~~~ 62 (105)
T 3m9j_A 21 KLVVVDFSATWCGPCKMIKPFFHSLSEKYS--NVIFLEVDVDDC 62 (105)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHHST--TSEEEEEETTTC
T ss_pred CeEEEEEECCCChhhHHHHHHHHHHHHHcc--CeEEEEEEhhhh
Confidence 455555569999999999999999988874 488888886653
No 181
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=97.78 E-value=3.6e-05 Score=58.71 Aligned_cols=43 Identities=19% Similarity=0.317 Sum_probs=35.3
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCChH
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTPN 145 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~~ 145 (259)
+.+|++|++.||+.|+...+.|.++..++ .++.++.|..+...
T Consensus 38 k~vvv~F~a~wC~~C~~~~p~l~~l~~~~--~~v~~~~vd~d~~~ 80 (125)
T 1r26_A 38 ILTVAWFTAVWCGPCKTIERPMEKIAYEF--PTVKFAKVDADNNS 80 (125)
T ss_dssp SCEEEEEECTTCHHHHHTHHHHHHHHHHC--TTSEEEEEETTTCH
T ss_pred CEEEEEEECCcCHhHHHHHHHHHHHHHHC--CCCEEEEEECCCCH
Confidence 45555666999999999999999998887 46999999987644
No 182
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=97.77 E-value=4.7e-05 Score=59.84 Aligned_cols=53 Identities=13% Similarity=0.119 Sum_probs=39.3
Q ss_pred cEEEEEEcCCC--CHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCChHHHHHHHhhCCCCCCCcccCCchHHHHHhCCc
Q 024977 101 VAVVALLRHFG--CPCCWELASALKESKARFDSAGVKLIAVGVGTPNKAQILAERLPFPMDCLYADPDRKVYNLLGLY 176 (259)
Q Consensus 101 ~vvL~f~r~~~--Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~~~~~~f~~~~~fp~~~ll~D~~~~~~~~~Gv~ 176 (259)
++| +|||+.| |+.|+...|-|.++.+++..+.++++-|. .|.+.+++..|||.
T Consensus 36 ~vl-VdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVd----------------------vDe~~~lA~~ygV~ 90 (140)
T 2qgv_A 36 DGV-VLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIAD----------------------LEQSEAIGDRFGAF 90 (140)
T ss_dssp SEE-EEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECC----------------------HHHHHHHHHHHTCC
T ss_pred CEE-EEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEE----------------------CCCCHHHHHHcCCc
Confidence 554 5888999 99999999999999988854326666555 45566777777774
No 183
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=97.77 E-value=7.3e-05 Score=56.58 Aligned_cols=45 Identities=4% Similarity=-0.200 Sum_probs=35.5
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhh----CCcEEEEEeCCChH
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDS----AGVKLIAVGVGTPN 145 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~----~gv~vv~Vs~~~~~ 145 (259)
+.+|+.|+++||++|+...|.+.++..++.. .++.++.|..+...
T Consensus 34 ~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~ 82 (127)
T 3h79_A 34 KDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYP 82 (127)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCH
T ss_pred CCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccH
Confidence 5666667799999999999999999887753 35778888877643
No 184
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=97.77 E-value=6.6e-05 Score=63.57 Aligned_cols=43 Identities=14% Similarity=0.134 Sum_probs=36.5
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhh--CCcEEEEEeCCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDS--AGVKLIAVGVGT 143 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~--~gv~vv~Vs~~~ 143 (259)
+.+|+.|+++||+.|+...|.+.+++.++.+ .++.++.|..+.
T Consensus 31 ~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~ 75 (244)
T 3q6o_A 31 SAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAE 75 (244)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTS
T ss_pred CeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCc
Confidence 5666667799999999999999999999876 478999999853
No 185
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.76 E-value=1.8e-05 Score=60.98 Aligned_cols=43 Identities=16% Similarity=0.243 Sum_probs=35.8
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGT 143 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~ 143 (259)
+.+|+.|+++||+.|+...|.|.++..++...++.++.|..+.
T Consensus 27 ~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~ 69 (137)
T 2dj0_A 27 VTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGR 69 (137)
T ss_dssp SCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTT
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCcc
Confidence 3666677799999999999999999998876678888887654
No 186
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=97.74 E-value=4.5e-05 Score=63.83 Aligned_cols=45 Identities=9% Similarity=0.163 Sum_probs=38.3
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCC--cEEEEEeCCChH
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAG--VKLIAVGVGTPN 145 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~g--v~vv~Vs~~~~~ 145 (259)
+.+|+.|+++||++|+...+.|.++..+++..+ +.++.|..+...
T Consensus 33 ~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~ 79 (241)
T 3idv_A 33 DTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSAS 79 (241)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCH
T ss_pred CeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCH
Confidence 567777779999999999999999999998776 888888877644
No 187
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=97.72 E-value=0.00016 Score=54.53 Aligned_cols=37 Identities=11% Similarity=-0.014 Sum_probs=27.9
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEe
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVG 140 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs 140 (259)
+.+|+|+.++||++|..-.+.|.++..+ .++.++-|.
T Consensus 25 ~~vvi~khatwCgpc~~~~~~~e~~~~~---~~v~~~~vd 61 (112)
T 3iv4_A 25 KYVFVLKHSETCPISANAYDQFNKFLYE---RDMDGYYLI 61 (112)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHH---HTCCEEEEE
T ss_pred CCEEEEEECCcCHhHHHHHHHHHHHhcc---CCceEEEEE
Confidence 5677777799999999999999998763 345554443
No 188
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=97.64 E-value=0.00034 Score=54.71 Aligned_cols=53 Identities=25% Similarity=0.283 Sum_probs=41.4
Q ss_pred cEEEEEEcCCCC--HhhHHHHHHHHHHHHHHhhCCcEEEEEeCCChHHHHHHHhhCCCCCCCcccCCchHHHHHhCCc
Q 024977 101 VAVVALLRHFGC--PCCWELASALKESKARFDSAGVKLIAVGVGTPNKAQILAERLPFPMDCLYADPDRKVYNLLGLY 176 (259)
Q Consensus 101 ~vvL~f~r~~~C--p~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~~~~~~f~~~~~fp~~~ll~D~~~~~~~~~Gv~ 176 (259)
..||++||+.|| ++|+...|-|.++.+++.. .++++-|. .|.+.++++.|||.
T Consensus 34 ~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~-~v~~~KVd----------------------vDe~~~la~~ygV~ 88 (137)
T 2qsi_A 34 KIVVLFFRGDAVRFPEAADLAVVLPELINAFPG-RLVAAEVA----------------------AEAERGLMARFGVA 88 (137)
T ss_dssp SEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTT-TEEEEEEC----------------------GGGHHHHHHHHTCC
T ss_pred CcEEEEEeCCccCCCchhhHHhHHHHHHHHccC-CcEEEEEE----------------------CCCCHHHHHHcCCc
Confidence 368888889999 9999999999999988843 46666665 35566777788774
No 189
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=97.59 E-value=0.0003 Score=57.17 Aligned_cols=37 Identities=8% Similarity=0.065 Sum_probs=26.6
Q ss_pred ccCeEEEEe-CCeEEEEEe---cCCCCCCCCHHHHHHHhcc
Q 024977 219 QQGGMFVFK-GKQLLYARK---DEGTGDHASLDDVFDICCK 255 (259)
Q Consensus 219 ~~gg~fVid-~g~V~y~~~---~~~~~d~~~~~~iL~a~~~ 255 (259)
..|..++++ +|+++|... ..+..+.+.+.++|+.+.+
T Consensus 104 g~Pt~v~l~~dG~~v~~~ty~p~~~~~~~~~f~~~L~~v~~ 144 (173)
T 3ira_A 104 GWPLNIIMTPGKKPFFAGTYIPKNTRFNQIGMLELVPRIKE 144 (173)
T ss_dssp CSSEEEEECTTSCEEEEESSCCSSCBTTBCCHHHHHHHHHH
T ss_pred CCcceeeECCCCCceeeeeeCCCCcCCCCCCHHHHHHHHHH
Confidence 367888888 899988732 2344577889998887753
No 190
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.57 E-value=0.00012 Score=56.42 Aligned_cols=42 Identities=21% Similarity=0.265 Sum_probs=34.8
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCCh
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTP 144 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~ 144 (259)
+.||+.|+++||+.|+...+.|.++..++ .++.++.|..+..
T Consensus 31 ~~vvv~f~a~wC~~C~~~~p~l~~la~~~--~~v~~~~vd~~~~ 72 (135)
T 2dbc_A 31 LWVVIHLYRSSVPMCLVVNQHLSVLARKF--PETKFVKAIVNSC 72 (135)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHC--SSEEEEEECCSSS
T ss_pred CEEEEEEECCCChHHHHHHHHHHHHHHHC--CCcEEEEEEhhcC
Confidence 56777778999999999999999998876 3688888877653
No 191
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=97.56 E-value=5.2e-05 Score=59.50 Aligned_cols=39 Identities=15% Similarity=0.134 Sum_probs=25.7
Q ss_pred cEEEEEEcCCC--CHhhHHHHHHHHHHHHHHhhCCcE--EEEEeCC
Q 024977 101 VAVVALLRHFG--CPCCWELASALKESKARFDSAGVK--LIAVGVG 142 (259)
Q Consensus 101 ~vvL~f~r~~~--Cp~C~~~l~~L~~~~~~~~~~gv~--vv~Vs~~ 142 (259)
.+|| +|++.| |+.|+...|.|.++..++ .++. ++.|..+
T Consensus 36 ~~vv-~f~~~~~~C~~C~~l~P~l~~la~~~--~~v~~~~~~Vd~d 78 (142)
T 2es7_A 36 DGVI-LLSSDPRRTPEVSDNPVMIAELLREF--PQFDWQVAVADLE 78 (142)
T ss_dssp SEEE-EECCCSCC----CCHHHHHHHHHHTC--TTSCCEEEEECHH
T ss_pred CEEE-EEECCCCCCccHHHHHHHHHHHHHHh--cccceeEEEEECC
Confidence 4455 555666 999999999999999888 3577 7777654
No 192
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=97.55 E-value=0.00014 Score=58.16 Aligned_cols=43 Identities=14% Similarity=0.089 Sum_probs=35.8
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCCh
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTP 144 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~ 144 (259)
++||+-||++||++|+...|-|.++.+++.. .+.++-|..+..
T Consensus 42 k~VVVdF~A~WCgPCk~m~PvleelA~e~~~-~v~f~kVDVDe~ 84 (160)
T 2av4_A 42 RLVCIRFGHDYDPDCMKMDELLYKVADDIKN-FCVIYLVDITEV 84 (160)
T ss_dssp SEEEEEEECTTSHHHHHHHHHHHHHHHHHTT-TEEEEEEETTTC
T ss_pred CEEEEEEECCCChhHHHHHHHHHHHHHHccC-CcEEEEEECCCC
Confidence 5777777899999999999999999998843 377888887754
No 193
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=97.55 E-value=5.8e-05 Score=62.51 Aligned_cols=44 Identities=23% Similarity=0.336 Sum_probs=35.9
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCChH
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTPN 145 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~~ 145 (259)
+.+|+.|+++||+.|+...+.+.++..++.. .+.++.|..+...
T Consensus 115 ~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~-~v~~~~vd~~~~~ 158 (210)
T 3apq_A 115 ELWFVNFYSPGCSHCHDLAPTWREFAKEVDG-LLRIGAVNCGDDR 158 (210)
T ss_dssp CCEEEEEECTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETTTCH
T ss_pred CcEEEEEeCCCChhHHHHHHHHHHHHHHhcC-ceEEEEEECCccH
Confidence 4566666699999999999999999988854 4888889877644
No 194
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=96.68 E-value=1.2e-05 Score=58.00 Aligned_cols=42 Identities=21% Similarity=0.332 Sum_probs=32.5
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGT 143 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~ 143 (259)
+.+|++|++.|||.|....+.+.++..++.. ++.++.|..+.
T Consensus 20 ~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~ 61 (106)
T 2yj7_A 20 KPVLVDFWAPWCGPCRMIAPIIEELAKEYEG-KVKVVKVNVDE 61 (106)
Confidence 4555556699999999999999998887753 57777777654
No 195
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=97.52 E-value=0.00017 Score=54.60 Aligned_cols=41 Identities=15% Similarity=0.234 Sum_probs=27.7
Q ss_pred cEEEEEEcCCCCH--------------hhHHHHHHHHHHHHHHhhCCcEEEEEeCC
Q 024977 101 VAVVALLRHFGCP--------------CCWELASALKESKARFDSAGVKLIAVGVG 142 (259)
Q Consensus 101 ~vvL~f~r~~~Cp--------------~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~ 142 (259)
+.+|+.|+++||+ .|+...+.+.++..++.. ++.++.|..+
T Consensus 22 k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~-~~~~~~vd~d 76 (123)
T 1oaz_A 22 GAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQG-KLTVAKLNID 76 (123)
T ss_dssp SEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC--------CEEEEEETT
T ss_pred CeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcC-CeEEEEEECC
Confidence 5666667799999 999999999988877754 4777777644
No 196
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=97.49 E-value=2.6e-05 Score=58.87 Aligned_cols=43 Identities=21% Similarity=0.305 Sum_probs=34.9
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCChH
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTPN 145 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~~ 145 (259)
+.+|++|++.||+.|+...+.|.++..++. ++.++.|..+...
T Consensus 37 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~~~ 79 (130)
T 1wmj_A 37 KVVIIDFTASWCGPCRFIAPVFAEYAKKFP--GAVFLKVDVDELK 79 (130)
T ss_dssp CBCBEECCSSSCSCSSSSHHHHHHHHHHCT--TBCCEECCTTTSG
T ss_pred CEEEEEEECCCChhHHHHHHHHHHHHHHCC--CCEEEEEeccchH
Confidence 455666669999999999999999988875 7888888887543
No 197
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=97.45 E-value=8.9e-05 Score=51.48 Aligned_cols=42 Identities=17% Similarity=0.255 Sum_probs=33.7
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGT 143 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~ 143 (259)
.++|++|+++|||+|+...+.|.++..++. .++.++.|..+.
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~~vd~~~ 44 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMP-DAVEVEYINVME 44 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCS-SSEEEEEEESSS
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcC-CceEEEEEECCC
Confidence 355666679999999999999999888775 468888888654
No 198
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=96.58 E-value=1.8e-05 Score=60.01 Aligned_cols=77 Identities=19% Similarity=0.268 Sum_probs=45.8
Q ss_pred CCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHH---HHHHHHHhhCCcEEEEEeCCChHHHHHHHh---hCCCCCC
Q 024977 86 GEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASAL---KESKARFDSAGVKLIAVGVGTPNKAQILAE---RLPFPMD 159 (259)
Q Consensus 86 G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L---~~~~~~~~~~gv~vv~Vs~~~~~~~~~f~~---~~~fp~~ 159 (259)
.+.+.+....+ +.+|++|+++||++|+...+.+ .++...+. .++.++.|..++.+. ..+.+ -.++|.-
T Consensus 9 ~~~~~~~~~~~----k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~-~~~~~~~vd~~~~~~-~~~~~~~~v~~~Pt~ 82 (130)
T 2lst_A 9 PEALALAQAHG----RMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLE-ARFVVASVSVDTPEG-QELARRYRVPGTPTF 82 (130)
Confidence 44455555444 4556666699999999999988 77666554 357777777653221 22222 1234432
Q ss_pred CcccCC-chHH
Q 024977 160 CLYADP-DRKV 169 (259)
Q Consensus 160 ~ll~D~-~~~~ 169 (259)
++.|+ +|.+
T Consensus 83 -~~~d~~~G~~ 92 (130)
T 2lst_A 83 -VFLVPKAGAW 92 (130)
Confidence 67775 3554
No 199
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=97.37 E-value=0.00019 Score=68.13 Aligned_cols=43 Identities=14% Similarity=0.105 Sum_probs=37.0
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhh--CCcEEEEEeCCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDS--AGVKLIAVGVGT 143 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~--~gv~vv~Vs~~~ 143 (259)
+.+|+.|+++||++|+.++|.+.+++.+++. .++.++.|..+.
T Consensus 31 k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~ 75 (519)
T 3t58_A 31 SAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAE 75 (519)
T ss_dssp SEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTS
T ss_pred CeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCc
Confidence 5677777799999999999999999999875 368899998864
No 200
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=97.35 E-value=1.5e-05 Score=59.40 Aligned_cols=38 Identities=13% Similarity=0.226 Sum_probs=28.3
Q ss_pred eEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHH
Q 024977 88 PVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARF 129 (259)
Q Consensus 88 ~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~ 129 (259)
.++|++..++ +.||. |+++||+.|+...|.|.++..++
T Consensus 4 ~~~la~~~~k---~~vV~-F~A~WC~~C~~~~p~~~~~a~~~ 41 (106)
T 3kp8_A 4 AVGLAAHLRQ---IGGTM-YGAYWCPHCQDQKELFGAAFDQV 41 (106)
T ss_dssp HHHHHHHHHH---HTCEE-EECTTCHHHHHHHHHHGGGGGGS
T ss_pred hhHHHHhcCC---CEEEE-EECCCCHHHHHHHHHHHHHHHhC
Confidence 4556666664 45554 45999999999999998887555
No 201
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=97.32 E-value=0.0001 Score=51.23 Aligned_cols=40 Identities=15% Similarity=0.350 Sum_probs=32.3
Q ss_pred EEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCC
Q 024977 103 VVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGT 143 (259)
Q Consensus 103 vL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~ 143 (259)
.|+.|+++|||+|+...+.|.++..++. .++.++.|..+.
T Consensus 4 ~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~~vd~~~ 43 (85)
T 1nho_A 4 NIEVFTSPTCPYCPMAIEVVDEAKKEFG-DKIDVEKIDIMV 43 (85)
T ss_dssp CEEEESCSSSCCSTTHHHHHHHHHHHHC-SSCCEEEECTTT
T ss_pred EEEEEECCCCcchHHHHHHHHHHHHHhc-CCeEEEEEECCC
Confidence 4566679999999999999999888775 368888887654
No 202
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=97.25 E-value=0.00013 Score=57.96 Aligned_cols=73 Identities=12% Similarity=0.201 Sum_probs=39.5
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHH--HHHhhCCcEEEEEeCCChHHHHHHHhhCCCCCCCcccCCchHH-HHHhCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESK--ARFDSAGVKLIAVGVGTPNKAQILAERLPFPMDCLYADPDRKV-YNLLGL 175 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~--~~~~~~gv~vv~Vs~~~~~~~~~f~~~~~fp~~~ll~D~~~~~-~~~~Gv 175 (259)
+.||+.|++.||++|+...+.+.+.. .++.+.++..|-|..+..+....| ...++|.- ++.|++|+. .+..|.
T Consensus 45 KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~fv~V~vD~e~~~~~~~~-~v~~~PT~-~f~~~~G~~v~~~~G~ 120 (151)
T 3ph9_A 45 KPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLMHETTDKNLSP-DGQYVPRI-MFVDPSLTVRADIAGR 120 (151)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHTCEEEEESSCCSCGGGCT-TCCCSSEE-EEECTTSCBCTTCCCS
T ss_pred CcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcCeEEEEecCCchhhHhhc-CCCCCCEE-EEECCCCCEEEEEeCC
Confidence 45566666999999999999887642 122222343344432222221111 12456643 778877654 444454
No 203
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=97.24 E-value=0.00068 Score=57.65 Aligned_cols=45 Identities=11% Similarity=-0.071 Sum_probs=36.7
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhh---CCcEEEEEeCCChH
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDS---AGVKLIAVGVGTPN 145 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~---~gv~vv~Vs~~~~~ 145 (259)
+++|+.|+++|||+|+...|.|.++..++.. .++.+..|..+...
T Consensus 139 ~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~~ 186 (243)
T 2hls_A 139 RVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYENP 186 (243)
T ss_dssp CEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTCH
T ss_pred CcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECccCH
Confidence 6777777799999999999999999988742 57888888776543
No 204
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=97.24 E-value=0.00073 Score=53.85 Aligned_cols=39 Identities=18% Similarity=0.335 Sum_probs=30.4
Q ss_pred CcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEe
Q 024977 100 GVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVG 140 (259)
Q Consensus 100 ~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs 140 (259)
++++|+.|+.+|||+|....+.|.++..+..+ ++++.+.
T Consensus 22 a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~--v~~~~~~ 60 (175)
T 3gyk_A 22 GDVTVVEFFDYNCPYCRRAMAEVQGLVDADPN--VRLVYRE 60 (175)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--EEEEEEE
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHHHHhCCC--EEEEEEe
Confidence 36777788899999999999999998876543 5555543
No 205
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=97.16 E-value=0.00073 Score=45.96 Aligned_cols=35 Identities=14% Similarity=0.290 Sum_probs=26.0
Q ss_pred EEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEe
Q 024977 105 ALLRHFGCPCCWELASALKESKARFDSAGVKLIAVG 140 (259)
Q Consensus 105 ~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs 140 (259)
+.|+++||++|+...+.+.++..++. ..+.++.|.
T Consensus 4 v~f~a~wC~~C~~~~~~l~~~~~~~~-~~~~~~~v~ 38 (77)
T 1ilo_A 4 IQIYGTGCANCQMLEKNAREAVKELG-IDAEFEKIK 38 (77)
T ss_dssp EEEECSSSSTTHHHHHHHHHHHHHTT-CCEEEEEEC
T ss_pred EEEEcCCChhHHHHHHHHHHHHHHcC-CceEEEEec
Confidence 34457899999999999999887764 245555554
No 206
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=97.15 E-value=0.0011 Score=54.01 Aligned_cols=44 Identities=11% Similarity=0.204 Sum_probs=33.4
Q ss_pred cEEEEEEcC-------CCCHhhHHHHHHHHHHHHHHhh----CCcEEEEEeCCCh
Q 024977 101 VAVVALLRH-------FGCPCCWELASALKESKARFDS----AGVKLIAVGVGTP 144 (259)
Q Consensus 101 ~vvL~f~r~-------~~Cp~C~~~l~~L~~~~~~~~~----~gv~vv~Vs~~~~ 144 (259)
..||++||+ .||++|+...|.|.++..++.. ..+.++-|..+..
T Consensus 38 ~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~ 92 (178)
T 3ga4_A 38 YFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEV 92 (178)
T ss_dssp CEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTC
T ss_pred CcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccC
Confidence 455666667 5999999999999999998863 3466666777653
No 207
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=97.12 E-value=0.00048 Score=64.43 Aligned_cols=45 Identities=20% Similarity=0.340 Sum_probs=36.5
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhC-C------cEEEEEeCCChH
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSA-G------VKLIAVGVGTPN 145 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~-g------v~vv~Vs~~~~~ 145 (259)
+.+|+.|+++||++|+...|.+.++..++.+. | +.++.|..+...
T Consensus 43 k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~ 94 (470)
T 3qcp_A 43 CPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEV 94 (470)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCH
T ss_pred CeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCH
Confidence 45566666999999999999999999988643 3 889999987653
No 208
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=97.08 E-value=0.00074 Score=51.16 Aligned_cols=39 Identities=21% Similarity=0.248 Sum_probs=32.1
Q ss_pred EEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC
Q 024977 102 AVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG 142 (259)
Q Consensus 102 vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~ 142 (259)
.||+.|++.||++|+...|.|.++..++. ++.++-|..+
T Consensus 25 ~vvv~F~a~wc~~C~~~~p~l~~la~~~~--~v~f~kvd~d 63 (118)
T 3evi_A 25 WVIIHLYRSSIPMCLLVNQHLSLLARKFP--ETKFVKAIVN 63 (118)
T ss_dssp EEEEEEECTTSHHHHHHHHHHHHHHHHCT--TSEEEEEEGG
T ss_pred eEEEEEeCCCChHHHHHHHHHHHHHHHCC--CCEEEEEEhH
Confidence 66667779999999999999999998874 5777777644
No 209
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=97.06 E-value=0.0011 Score=55.23 Aligned_cols=38 Identities=16% Similarity=0.412 Sum_probs=29.9
Q ss_pred CcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeC
Q 024977 100 GVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGV 141 (259)
Q Consensus 100 ~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~ 141 (259)
++.+|+.|+.+|||+|+...+.|.++.+ .+++++.+..
T Consensus 86 ~k~~vv~F~d~~Cp~C~~~~~~l~~l~~----~~v~v~~~~~ 123 (216)
T 1eej_A 86 EKHVITVFTDITCGYCHKLHEQMADYNA----LGITVRYLAF 123 (216)
T ss_dssp CCEEEEEEECTTCHHHHHHHTTHHHHHH----TTEEEEEEEC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHh----CCcEEEEEEC
Confidence 4677777779999999999999988653 3788877643
No 210
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=97.02 E-value=0.0013 Score=61.57 Aligned_cols=45 Identities=13% Similarity=0.160 Sum_probs=38.7
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCChH
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTPN 145 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~~ 145 (259)
+.+|+.|+++||+.|+...|.+.++..+++..++.++.|..+...
T Consensus 32 ~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~~~ 76 (504)
T 2b5e_A 32 DLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTENQ 76 (504)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTCH
T ss_pred CeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCCCH
Confidence 566666679999999999999999999987778999999987653
No 211
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=97.02 E-value=0.00073 Score=57.90 Aligned_cols=41 Identities=22% Similarity=0.234 Sum_probs=34.0
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGT 143 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~ 143 (259)
+.||+.|+++||+.|+...|.|.++..++. ++.++.|..+.
T Consensus 134 k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~--~v~f~kVd~d~ 174 (245)
T 1a0r_P 134 TTIVVHIYEDGIKGCDALNSSLICLAAEYP--MVKFCKIKASN 174 (245)
T ss_dssp CEEEEEEECTTSTTHHHHHHHHHHHHHHCT--TSEEEEEEHHH
T ss_pred CEEEEEEECCCChHHHHHHHHHHHHHHHCC--CCEEEEEeCCc
Confidence 566677779999999999999999998874 58888887643
No 212
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=97.00 E-value=0.00085 Score=62.23 Aligned_cols=44 Identities=14% Similarity=0.192 Sum_probs=36.2
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhC-CcEEEEEeCCCh
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSA-GVKLIAVGVGTP 144 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~-gv~vv~Vs~~~~ 144 (259)
+.||+.|+++||++|+...|.|.++..++++. ++.++.|..+..
T Consensus 371 k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~~~~ 415 (481)
T 3f8u_A 371 KDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATAN 415 (481)
T ss_dssp CEEEEEEECTTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTSS
T ss_pred CcEEEEEecCcChhHHHhhHHHHHHHHHhccCCCEEEEEEECCch
Confidence 56777777999999999999999999988765 677777776553
No 213
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=96.99 E-value=0.0012 Score=54.82 Aligned_cols=43 Identities=7% Similarity=-0.050 Sum_probs=35.5
Q ss_pred CcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCCh
Q 024977 100 GVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTP 144 (259)
Q Consensus 100 ~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~ 144 (259)
++++|+.|+++||++|+...+.+.++..++ .++.++.|..+..
T Consensus 136 ~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~--~~v~~~~vd~~~~ 178 (229)
T 2ywm_A 136 IPIEIWVFVTTSCGYCPSAAVMAWDFALAN--DYITSKVIDASEN 178 (229)
T ss_dssp SCEEEEEEECTTCTTHHHHHHHHHHHHHHC--TTEEEEEEEGGGC
T ss_pred CCeEEEEEECCCCcchHHHHHHHHHHHHHC--CCeEEEEEECCCC
Confidence 477677777999999999999999998877 3788888887653
No 214
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=96.94 E-value=0.0016 Score=58.79 Aligned_cols=45 Identities=11% Similarity=0.053 Sum_probs=36.3
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhh-----CCcEEEEEeCCChH
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDS-----AGVKLIAVGVGTPN 145 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~-----~gv~vv~Vs~~~~~ 145 (259)
+.+|+.|+++||+.|+...|.+.++..++++ .++.++.|..+...
T Consensus 23 ~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~ 72 (382)
T 2r2j_A 23 DVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHS 72 (382)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCH
T ss_pred CeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccH
Confidence 5666666799999999999999999998863 34888888877643
No 215
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=96.94 E-value=0.0012 Score=54.99 Aligned_cols=44 Identities=14% Similarity=0.215 Sum_probs=35.9
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCC--cEEEEEeCCCh
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAG--VKLIAVGVGTP 144 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~g--v~vv~Vs~~~~ 144 (259)
+.+++.|++.||+.|+...+.+.++..++...+ +.++.|..+..
T Consensus 148 ~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~ 193 (241)
T 3idv_A 148 DIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAE 193 (241)
T ss_dssp SEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTC
T ss_pred CeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCC
Confidence 566666779999999999999999999887654 77887876654
No 216
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=96.82 E-value=0.0017 Score=57.78 Aligned_cols=43 Identities=12% Similarity=0.166 Sum_probs=34.1
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhC-CcEEEEEeCCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSA-GVKLIAVGVGT 143 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~-gv~vv~Vs~~~ 143 (259)
+.+|+.|+++||+.|+...|.+.++..+++.. ++.++.|..+.
T Consensus 268 k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~ 311 (361)
T 3uem_A 268 KNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTA 311 (361)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTT
T ss_pred CcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCc
Confidence 56666777999999999999999999988765 46666666543
No 217
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=96.75 E-value=0.0014 Score=58.48 Aligned_cols=44 Identities=5% Similarity=-0.040 Sum_probs=35.8
Q ss_pred cEEEEEEcCCCCHhhHHHHHH-------HHHHHHHHhhCCcEEEEEeCCChH
Q 024977 101 VAVVALLRHFGCPCCWELASA-------LKESKARFDSAGVKLIAVGVGTPN 145 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~-------L~~~~~~~~~~gv~vv~Vs~~~~~ 145 (259)
+.+|+.|+++||+ |+..+|. +.++..+++..++.++.|..+...
T Consensus 29 ~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~~ 79 (350)
T 1sji_A 29 DVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKEA 79 (350)
T ss_dssp SEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTTH
T ss_pred CeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCCH
Confidence 5677777799999 9888888 788888887778999999887653
No 218
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=96.63 E-value=0.0029 Score=58.58 Aligned_cols=44 Identities=16% Similarity=0.129 Sum_probs=36.7
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCChH
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTPN 145 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~~ 145 (259)
+.+|+.|+++||+.|+...|.+.++..+++.. +.++.|..+...
T Consensus 22 ~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~-v~~~~vd~~~~~ 65 (481)
T 3f8u_A 22 GLMLVEFFAPWCGHAKRLAPEYEAAATRLKGI-VPLAKVDCTANT 65 (481)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CCEEEEETTTCH
T ss_pred CeEEEEEECCCCHHHHHhHHHHHHHHHHhcCc-eEEEEEECCCCH
Confidence 56666677999999999999999999988765 888888887643
No 219
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=96.62 E-value=0.0018 Score=54.23 Aligned_cols=40 Identities=23% Similarity=0.262 Sum_probs=32.1
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG 142 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~ 142 (259)
+.||+.|++.||+.|+...+.|.++..++. ++.++.|..+
T Consensus 121 k~vvV~F~a~wC~~C~~l~p~l~~la~~~~--~v~f~~vd~~ 160 (217)
T 2trc_P 121 TTIVVNIYEDGVRGCDALNSSLECLAAEYP--MVKFCKIRAS 160 (217)
T ss_dssp CEEEEEEECTTSTTHHHHHHHHHHHHTTCT--TSEEEEEEHH
T ss_pred cEEEEEEECCCCccHHHHHHHHHHHHHHCC--CeEEEEEECC
Confidence 456666669999999999999999888773 6888877743
No 220
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=96.55 E-value=0.0016 Score=60.81 Aligned_cols=42 Identities=19% Similarity=0.256 Sum_probs=32.7
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhh--CCcEEEEEeCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDS--AGVKLIAVGVG 142 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~--~gv~vv~Vs~~ 142 (259)
+.+|+.|+++||++|+...|.+.++..++.. .++.++.|..+
T Consensus 377 k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~ 420 (504)
T 2b5e_A 377 KDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHT 420 (504)
T ss_dssp CCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGG
T ss_pred CCEEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCC
Confidence 4555566699999999999999999998863 35667777654
No 221
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=96.34 E-value=0.0065 Score=59.82 Aligned_cols=44 Identities=9% Similarity=-0.136 Sum_probs=35.9
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCChH
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTPN 145 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~~ 145 (259)
+.+|+.|+++||+.|+..+|.+.++..+++. ++.++.|..+...
T Consensus 676 ~~v~v~F~a~wC~~C~~~~p~~~~la~~~~~-~~~~~~vd~~~~~ 719 (780)
T 3apo_A 676 THWVVDFYAPWSGPSQNFAPEFELLARMIKG-KVRAGKVDCQAYP 719 (780)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTCH
T ss_pred CeEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CceEEEEECCCCH
Confidence 4556666699999999999999999988854 6888889887644
No 222
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=96.31 E-value=0.0053 Score=49.72 Aligned_cols=41 Identities=17% Similarity=0.267 Sum_probs=32.8
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG 142 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~ 142 (259)
+++|+.|+.+|||+|....+.|.++.+++.+ ++.++-+...
T Consensus 26 ~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~~~~ 66 (195)
T 3hd5_A 26 KIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQ-DVVLKQVPIA 66 (195)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEECC
T ss_pred CeEEEEEECCCCccHHHhhHHHHHHHHHCCC-CeEEEEEecc
Confidence 6677777799999999999999998887754 6777776654
No 223
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=96.23 E-value=0.0023 Score=47.21 Aligned_cols=24 Identities=21% Similarity=0.351 Sum_probs=18.9
Q ss_pred EEEEEEcCCCCHhhHHHHHHHHHHH
Q 024977 102 AVVALLRHFGCPCCWELASALKESK 126 (259)
Q Consensus 102 vvL~f~r~~~Cp~C~~~l~~L~~~~ 126 (259)
.|++ |+++|||+|+...+.|.++.
T Consensus 21 ~vv~-f~a~~C~~C~~~~~~l~~~~ 44 (116)
T 2e7p_A 21 PVVV-FSKTYCGYCNRVKQLLTQVG 44 (116)
T ss_dssp SEEE-EECTTCHHHHHHHHHHHHHT
T ss_pred CEEE-EECCCChhHHHHHHHHHHcC
Confidence 3444 66999999999999887753
No 224
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=96.18 E-value=0.0077 Score=59.26 Aligned_cols=45 Identities=9% Similarity=-0.012 Sum_probs=36.5
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCChHH
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTPNK 146 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~~~ 146 (259)
+.+|+.|+++||+.|+..+|.|.+++.+++. .+.++.|..+....
T Consensus 456 ~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~-~v~~~~vd~~~~~~ 500 (780)
T 3apo_A 456 EPWLVDFFAPWSPPSRALLPELRKASTLLYG-QLKVGTLDCTIHEG 500 (780)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHH
T ss_pred CeEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEeCCCCHH
Confidence 4555566699999999999999999999864 58899998876543
No 225
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=96.18 E-value=0.0051 Score=49.72 Aligned_cols=41 Identities=20% Similarity=0.182 Sum_probs=31.7
Q ss_pred CcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeC
Q 024977 100 GVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGV 141 (259)
Q Consensus 100 ~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~ 141 (259)
++++|+.|+.+|||+|....+.|.++..++.. .+.+..+..
T Consensus 22 ~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~ 62 (195)
T 2znm_A 22 GKIEVLEFFGYFCVHCHHFDPLLLKLGKALPS-DAYLRTEHV 62 (195)
T ss_dssp SSEEEEEEECTTSCCTTSSCHHHHHHHHHSCT-TEEEEEEEC
T ss_pred CCcEEEEEECCCChhHHHHhHHHHHHHHHCCC-ceEEEEecc
Confidence 46777777899999999999999988877643 566665554
No 226
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=96.10 E-value=0.0077 Score=41.63 Aligned_cols=37 Identities=14% Similarity=0.298 Sum_probs=29.0
Q ss_pred EEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC
Q 024977 104 VALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG 142 (259)
Q Consensus 104 L~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~ 142 (259)
|+.|..+|||+|....+.|.++..+. .|+.+..|..+
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~--~~i~~~~vdi~ 39 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNER--DDFQYQYVDIR 39 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHH--SSCEEEEECHH
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcC--CCceEEEEecc
Confidence 44567999999999999998877654 57888887654
No 227
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=95.82 E-value=0.0097 Score=44.29 Aligned_cols=38 Identities=16% Similarity=0.353 Sum_probs=29.6
Q ss_pred EEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCC
Q 024977 103 VVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGT 143 (259)
Q Consensus 103 vL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~ 143 (259)
.|+.|+..||++|....+.|.++.++ .|+.+.-|..+.
T Consensus 31 ~vv~y~~~~C~~C~~a~~~L~~l~~e---~~i~~~~vDId~ 68 (107)
T 2fgx_A 31 KLVVYGREGCHLCEEMIASLRVLQKK---SWFELEVINIDG 68 (107)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHHHHH---SCCCCEEEETTT
T ss_pred EEEEEeCCCChhHHHHHHHHHHHHHh---cCCeEEEEECCC
Confidence 45556699999999999999888765 367777777764
No 228
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=95.82 E-value=0.015 Score=40.01 Aligned_cols=35 Identities=26% Similarity=0.519 Sum_probs=24.7
Q ss_pred EEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC
Q 024977 105 ALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG 142 (259)
Q Consensus 105 ~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~ 142 (259)
.+|++.|||+|+...+.|.++.. +.|+.+..+..+
T Consensus 5 ~~f~~~~C~~C~~~~~~l~~~~~---~~~~~~~~~~v~ 39 (80)
T 2k8s_A 5 AIFYHAGCPVCVSAEQAVANAID---PSKYTVEIVHLG 39 (80)
T ss_dssp EEEEECSCHHHHHHHHHHHHHSC---TTTEEEEEEETT
T ss_pred EEEeCCCCCchHHHHHHHHHHHH---hcCCeEEEEEec
Confidence 33458999999999999887653 346665555543
No 229
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=95.78 E-value=0.018 Score=47.54 Aligned_cols=45 Identities=18% Similarity=0.036 Sum_probs=35.7
Q ss_pred CcEEEEEE----cCCCCHhhHHHHHHHHHHHHHHhh-CCcEEEEEeCCCh
Q 024977 100 GVAVVALL----RHFGCPCCWELASALKESKARFDS-AGVKLIAVGVGTP 144 (259)
Q Consensus 100 ~~vvL~f~----r~~~Cp~C~~~l~~L~~~~~~~~~-~gv~vv~Vs~~~~ 144 (259)
++++|.|| |+.||+.|+..++.+.+++.++.. ..+.++.|..+..
T Consensus 21 ~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~ 70 (229)
T 2ywm_A 21 EPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFTH 70 (229)
T ss_dssp SCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTTC
T ss_pred CCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCccc
Confidence 48888888 688999999999999998877743 4577777876653
No 230
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=95.75 E-value=0.013 Score=47.17 Aligned_cols=41 Identities=20% Similarity=0.508 Sum_probs=31.8
Q ss_pred CcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeC
Q 024977 100 GVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGV 141 (259)
Q Consensus 100 ~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~ 141 (259)
++++|+.|+.+|||+|....+.|.++..++.+ ++.+.-+..
T Consensus 25 ~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~ 65 (192)
T 3h93_A 25 GKIEVVELFWYGCPHCYAFEPTIVPWSEKLPA-DVHFVRLPA 65 (192)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEEC
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHhCCC-CeEEEEEeh
Confidence 36777777899999999999999888877654 566665443
No 231
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=95.74 E-value=0.019 Score=47.23 Aligned_cols=42 Identities=14% Similarity=0.196 Sum_probs=34.4
Q ss_pred CcEEEEEEcCC-CCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCC
Q 024977 100 GVAVVALLRHF-GCPCCWELASALKESKARFDSAGVKLIAVGVGT 143 (259)
Q Consensus 100 ~~vvL~f~r~~-~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~ 143 (259)
++++|++|+.. ||++|+...+.|.++... ...+.++.|..+.
T Consensus 22 ~~v~lv~f~~~~~C~~C~~~~~~~~~la~~--~~~v~~~~vd~~~ 64 (226)
T 1a8l_A 22 NPVKLIVFVRKDHCQYCDQLKQLVQELSEL--TDKLSYEIVDFDT 64 (226)
T ss_dssp SCEEEEEEECSSSCTTHHHHHHHHHHHHTT--CTTEEEEEEETTS
T ss_pred CCeEEEEEecCCCCchhHHHHHHHHHHHhh--CCceEEEEEeCCC
Confidence 37887888899 999999999999987643 3468888898886
No 232
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=95.74 E-value=0.0078 Score=43.79 Aligned_cols=37 Identities=27% Similarity=0.426 Sum_probs=26.9
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG 142 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~ 142 (259)
..+|++|...|||+|....+.|.++. .++.+.-|..+
T Consensus 16 ~~~v~~f~~~~C~~C~~~~~~L~~l~-----~~i~~~~vdi~ 52 (100)
T 1wjk_A 16 LPVLTLFTKAPCPLCDEAKEVLQPYK-----DRFILQEVDIT 52 (100)
T ss_dssp CCEEEEEECSSCHHHHHHHHHTSTTS-----SSSEEEEEETT
T ss_pred CCEEEEEeCCCCcchHHHHHHHHHhh-----hCCeEEEEECC
Confidence 34455566999999998887776532 35888888887
No 233
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=95.55 E-value=0.031 Score=38.17 Aligned_cols=47 Identities=17% Similarity=0.345 Sum_probs=30.0
Q ss_pred EEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCChHHH-HHHHh--hCCCC
Q 024977 104 VALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTPNKA-QILAE--RLPFP 157 (259)
Q Consensus 104 L~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~~~~-~~f~~--~~~fp 157 (259)
+++|+..|||+|+...+.|.+ .|+.+..|..+..... ..+.+ ...+|
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~-------~~i~~~~vdi~~~~~~~~~~~~~g~~~vP 52 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMEN-------RGFDFEMINVDRVPEAAEALRAQGFRQLP 52 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHH-------TTCCCEEEETTTCHHHHHHHHHTTCCSSC
T ss_pred EEEEcCCCChhHHHHHHHHHH-------CCCCeEEEECCCCHHHHHHHHHhCCCccC
Confidence 344668999999987766654 5777778887753333 33333 24567
No 234
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=95.40 E-value=0.043 Score=43.33 Aligned_cols=42 Identities=17% Similarity=0.147 Sum_probs=32.5
Q ss_pred CcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhC-CcEEEEEeC
Q 024977 100 GVAVVALLRHFGCPCCWELASALKESKARFDSA-GVKLIAVGV 141 (259)
Q Consensus 100 ~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~-gv~vv~Vs~ 141 (259)
+|+.|+.|..++||+|....+.+.++..++.+. .++++....
T Consensus 27 a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~~v~~~~~~~ 69 (175)
T 1z6m_A 27 APVKMIEFINVRCPYCRKWFEESEELLAQSVKSGKVERIIKLF 69 (175)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEEC
T ss_pred CCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCCcEEEEEEeC
Confidence 367777777999999999999998888777433 477776543
No 235
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=95.36 E-value=0.039 Score=49.41 Aligned_cols=45 Identities=11% Similarity=-0.057 Sum_probs=33.2
Q ss_pred cEEEEEEcCCCCHhhHHHH------HHHHHHHHHHhhCCcEEEEEeCCChH
Q 024977 101 VAVVALLRHFGCPCCWELA------SALKESKARFDSAGVKLIAVGVGTPN 145 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l------~~L~~~~~~~~~~gv~vv~Vs~~~~~ 145 (259)
+.+|+.|+++||+.|...- +.+.++..+++..++.++.|..+...
T Consensus 31 ~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~~ 81 (367)
T 3us3_A 31 EVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDA 81 (367)
T ss_dssp SEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTTH
T ss_pred CeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcccH
Confidence 5666666699999984332 57778888787667999999887654
No 236
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=95.16 E-value=0.03 Score=52.66 Aligned_cols=43 Identities=21% Similarity=0.201 Sum_probs=34.7
Q ss_pred CcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCCh
Q 024977 100 GVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTP 144 (259)
Q Consensus 100 ~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~ 144 (259)
++..+.+|+..|||+|+...|.|.++..++. ++.+.-|..+..
T Consensus 117 ~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~--~v~~~~vd~~~~ 159 (521)
T 1hyu_A 117 GDFEFETYYSLSCHNCPDVVQALNLMAVLNP--RIKHTAIDGGTF 159 (521)
T ss_dssp SCEEEEEEECTTCSSHHHHHHHHHHHHHHCT--TEEEEEEETTTC
T ss_pred CCcceEEEECCCCcCcHHHHHHHHHHHhHcC--ceEEEEEechhh
Confidence 3677788889999999999999999877653 688877877653
No 237
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=95.12 E-value=0.02 Score=47.31 Aligned_cols=36 Identities=25% Similarity=0.421 Sum_probs=27.9
Q ss_pred CcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEE
Q 024977 100 GVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAV 139 (259)
Q Consensus 100 ~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~V 139 (259)
++++|+.|+.+|||+|+...+.|.++. +.|++++.+
T Consensus 86 ~k~~vv~F~d~~Cp~C~~~~~~l~~~~----~~~v~v~~~ 121 (211)
T 1t3b_A 86 EKHVVTVFMDITCHYCHLLHQQLKEYN----DLGITVRYL 121 (211)
T ss_dssp CSEEEEEEECTTCHHHHHHHTTHHHHH----HTTEEEEEE
T ss_pred CCEEEEEEECCCCHhHHHHHHHHHHHH----hCCcEEEEE
Confidence 467777777999999999999988743 237877765
No 238
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=95.00 E-value=0.05 Score=36.26 Aligned_cols=34 Identities=24% Similarity=0.375 Sum_probs=24.4
Q ss_pred EEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCChH
Q 024977 105 ALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTPN 145 (259)
Q Consensus 105 ~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~~ 145 (259)
.+|...|||+|+...+.|.+ .|+.+..+..+...
T Consensus 4 ~~y~~~~C~~C~~~~~~l~~-------~~i~~~~~di~~~~ 37 (75)
T 1r7h_A 4 TLYTKPACVQCTATKKALDR-------AGLAYNTVDISLDD 37 (75)
T ss_dssp EEEECTTCHHHHHHHHHHHH-------TTCCCEEEETTTCH
T ss_pred EEEeCCCChHHHHHHHHHHH-------cCCCcEEEECCCCH
Confidence 44568999999987776654 46777777776543
No 239
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=94.86 E-value=0.031 Score=45.37 Aligned_cols=41 Identities=22% Similarity=0.282 Sum_probs=31.1
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG 142 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~ 142 (259)
+++|+.|..+|||+|....+.|.++.+++.+ .+.+.-+...
T Consensus 25 ~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~-~v~~~~~p~~ 65 (193)
T 3hz8_A 25 KVEVLEFFGYFCPHCAHLEPVLSKHAKSFKD-DMYLRTEHVV 65 (193)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHTTCCT-TEEEEEEECC
T ss_pred CcEEEEEECCCChhHHHHHHHHHHHHHHCCC-CeEEEEecCC
Confidence 6667667799999999999999888877655 5666555443
No 240
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=94.54 E-value=0.014 Score=44.04 Aligned_cols=25 Identities=12% Similarity=0.320 Sum_probs=18.0
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHH
Q 024977 101 VAVVALLRHFGCPCCWELASALKES 125 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~ 125 (259)
..+|+.|++.||++|+..-+.+...
T Consensus 19 ~~~LV~F~A~wC~~Ck~~~~~i~~~ 43 (116)
T 3dml_A 19 ELRLLMFEQPGCLYCARWDAEIAPQ 43 (116)
T ss_dssp CEEEEEEECTTCHHHHHHHHHTTTT
T ss_pred CCEEEEEECCCCHHHHHHHHHHHhh
Confidence 3556666699999999977655443
No 241
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=94.44 E-value=0.056 Score=43.26 Aligned_cols=41 Identities=27% Similarity=0.395 Sum_probs=31.2
Q ss_pred CcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeC
Q 024977 100 GVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGV 141 (259)
Q Consensus 100 ~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~ 141 (259)
+++.|+.|..++||+|....+.|.++..++.. .+.+..+..
T Consensus 25 a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~ 65 (193)
T 2rem_A 25 GKIEVVEIFGYTCPHCAHFDSKLQAWGARQAK-DVRFTLVPA 65 (193)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHTSCT-TEEEEEEEC
T ss_pred CCeEEEEEECCCChhHhhhhHHHHHHHHhcCC-ceEEEEeCc
Confidence 36777777799999999999999888776643 566665543
No 242
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=94.23 E-value=0.066 Score=45.13 Aligned_cols=38 Identities=16% Similarity=0.210 Sum_probs=28.7
Q ss_pred CcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEe
Q 024977 100 GVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVG 140 (259)
Q Consensus 100 ~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs 140 (259)
++++|+.|..+|||+|+...+.+.++.++ .+++++-+.
T Consensus 97 ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~---g~v~v~~~~ 134 (241)
T 1v58_A 97 APVIVYVFADPFCPYCKQFWQQARPWVDS---GKVQLRTLL 134 (241)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHT---TSEEEEEEE
T ss_pred CCeEEEEEECCCChhHHHHHHHHHHHHhC---CcEEEEEEE
Confidence 46777777799999999999998876543 357766543
No 243
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=94.19 E-value=0.15 Score=40.17 Aligned_cols=65 Identities=14% Similarity=0.071 Sum_probs=39.7
Q ss_pred cEEEEEEcCCCCHhhHHHHHHH---HHHHHHHhhCCcEEEEEeCCChHHHHHHHh---hCCCCCCCcccCCc-hH
Q 024977 101 VAVVALLRHFGCPCCWELASAL---KESKARFDSAGVKLIAVGVGTPNKAQILAE---RLPFPMDCLYADPD-RK 168 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L---~~~~~~~~~~gv~vv~Vs~~~~~~~~~f~~---~~~fp~~~ll~D~~-~~ 168 (259)
+.|++.|.+.||+.|+..-... .+..+.+ +.++.++-+..++.+. .++.+ -.++|.- ++.|++ |+
T Consensus 43 K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l-~~~fv~v~~d~~~~~~-~~l~~~y~v~~~P~~-~fld~~~G~ 114 (153)
T 2dlx_A 43 KWLMINIQNVQDFACQCLNRDVWSNEAVKNII-REHFIFWQVYHDSEEG-QRYIQFYKLGDFPYV-SILDPRTGQ 114 (153)
T ss_dssp CEEEEEEECSCTTTHHHHHHHTTTCHHHHHHH-HHTEEEEEEESSSHHH-HHHHHHHTCCSSSEE-EEECTTTCC
T ss_pred CeEEEEEECCCCHhHHHHHHHhcCCHHHHHHH-HcCeEEEEEecCCHhH-HHHHHHcCCCCCCEE-EEEeCCCCc
Confidence 5566666699999999865443 2222222 2367777787776543 44554 2356643 778997 54
No 244
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=94.16 E-value=0.042 Score=38.98 Aligned_cols=46 Identities=20% Similarity=0.315 Sum_probs=27.6
Q ss_pred EEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCC-hHHHHHHHhhCCCC
Q 024977 104 VALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGT-PNKAQILAERLPFP 157 (259)
Q Consensus 104 L~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~-~~~~~~f~~~~~fp 157 (259)
|+.|+..||++|....+.|.+...++ +.-|..+. ++..++| +...|
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~------~~~vdid~~~~l~~~~--g~~vP 49 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA------FFSVFIDDDAALESAY--GLRVP 49 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC------EEEEECTTCHHHHHHH--TTTCS
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh------eEEEECCCCHHHHHHh--CCCcC
Confidence 45566999999998888776643221 44566654 3333334 23366
No 245
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=93.62 E-value=0.13 Score=35.79 Aligned_cols=46 Identities=26% Similarity=0.497 Sum_probs=29.2
Q ss_pred EEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCChHHHHHHHh----hCCCC
Q 024977 104 VALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTPNKAQILAE----RLPFP 157 (259)
Q Consensus 104 L~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~~~~~~f~~----~~~fp 157 (259)
+++|...|||+|+...+.|.+ .|+.+..|..+ .+...++.+ ...+|
T Consensus 8 v~~y~~~~C~~C~~~~~~L~~-------~~i~~~~vdv~-~~~~~~l~~~~~~~~~vP 57 (89)
T 2klx_A 8 IILYTRPNCPYCKRARDLLDK-------KGVKYTDIDAS-TSLRQEMVQRANGRNTFP 57 (89)
T ss_dssp EEEESCSCCTTTHHHHHHHHH-------HTCCEEEECSC-HHHHHHHHHHHHSSCCSC
T ss_pred EEEEECCCChhHHHHHHHHHH-------cCCCcEEEECC-HHHHHHHHHHhCCCCCcC
Confidence 344668999999987666654 46667777776 433344443 23667
No 246
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=93.04 E-value=0.064 Score=38.53 Aligned_cols=22 Identities=27% Similarity=0.498 Sum_probs=16.2
Q ss_pred EEEEEcCCCCHhhHHHHHHHHHH
Q 024977 103 VVALLRHFGCPCCWELASALKES 125 (259)
Q Consensus 103 vL~f~r~~~Cp~C~~~l~~L~~~ 125 (259)
|++ |...|||+|+...+.|.+.
T Consensus 14 v~~-f~~~~C~~C~~~~~~L~~~ 35 (105)
T 1kte_A 14 VVV-FIKPTCPFCRKTQELLSQL 35 (105)
T ss_dssp EEE-EECSSCHHHHHHHHHHHHS
T ss_pred EEE-EEcCCCHhHHHHHHHHHHc
Confidence 444 4589999999877776653
No 247
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=93.02 E-value=0.2 Score=36.13 Aligned_cols=32 Identities=22% Similarity=0.432 Sum_probs=22.3
Q ss_pred EEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCCh
Q 024977 106 LLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTP 144 (259)
Q Consensus 106 f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~ 144 (259)
.|...|||+|..-..-|.+ .|+.+..|..+..
T Consensus 20 vy~~~~Cp~C~~ak~~L~~-------~~i~y~~idI~~~ 51 (99)
T 3qmx_A 20 IYTWSTCPFCMRALALLKR-------KGVEFQEYCIDGD 51 (99)
T ss_dssp EEECTTCHHHHHHHHHHHH-------HTCCCEEEECTTC
T ss_pred EEEcCCChhHHHHHHHHHH-------CCCCCEEEEcCCC
Confidence 3558999999998877665 3566666665543
No 248
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=92.96 E-value=0.032 Score=45.73 Aligned_cols=40 Identities=28% Similarity=0.615 Sum_probs=28.8
Q ss_pred cEEEEEEcCCCCHhhHHHHHHH---HHHHHHHhhCCcEEEEEeCC
Q 024977 101 VAVVALLRHFGCPCCWELASAL---KESKARFDSAGVKLIAVGVG 142 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L---~~~~~~~~~~gv~vv~Vs~~ 142 (259)
++|+-|| .+|||+|....|.| .++.+++. .+|.+.-+...
T Consensus 115 ~~vveFf-~~~C~~C~~~~p~~~~~~~l~~~~~-~~v~~~~~~v~ 157 (197)
T 1un2_A 115 PQVLEFF-SFFCPHCYQFEEVLHISDNVKKKLP-EGVKMTKYHVN 157 (197)
T ss_dssp CSEEEEE-CTTCHHHHHHHHTSCHHHHHTTSSC-TTCCEEEEECS
T ss_pred CEEEEEE-CCCChhHHHhCcccccHHHHHHHCC-CCCEEEEeccC
Confidence 5555555 79999999999988 77766664 35666666543
No 249
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=92.91 E-value=0.28 Score=36.89 Aligned_cols=66 Identities=18% Similarity=0.229 Sum_probs=48.8
Q ss_pred EEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC----ChHHHHHHHhhCCC-CCCCcccCCchHHHHHhCCcc
Q 024977 104 VALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG----TPNKAQILAERLPF-PMDCLYADPDRKVYNLLGLYH 177 (259)
Q Consensus 104 L~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~----~~~~~~~f~~~~~f-p~~~ll~D~~~~~~~~~Gv~~ 177 (259)
+.+|...+|+.|+....-|. +.|+.+-.+... +.+.++.|.+.+++ +.. =+.+..+..|+.+++..
T Consensus 7 i~iY~~p~C~~c~ka~~~L~-------~~gi~~~~~di~~~~~~~~eL~~~l~~~g~~~~~-~l~n~~~~~~k~l~l~~ 77 (121)
T 3rdw_A 7 VTIYHNPRCSKSRETLALVE-------QQGITPQVVLYLETPPSVDKLKELLQQLGFSDAR-QLMRTKEDLYKTLNLDD 77 (121)
T ss_dssp CEEECCTTCHHHHHHHHHHH-------TTTCCCEEECTTTSCCCHHHHHHHHHHTTCSSGG-GGBCTTSHHHHHTTTTC
T ss_pred EEEEECCCCHHHHHHHHHHH-------HcCCCcEEEeeccCCCcHHHHHHHHHhcCCcCHH-HHhcCCChhhhhcCccc
Confidence 56777999999998775554 567766665442 45678888888888 721 27888999999999864
No 250
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=92.90 E-value=0.26 Score=35.98 Aligned_cols=53 Identities=19% Similarity=0.300 Sum_probs=33.0
Q ss_pred EEEEEcC----CCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCCh-HHHHHHHh---hCCCCCCCcccC
Q 024977 103 VVALLRH----FGCPCCWELASALKESKARFDSAGVKLIAVGVGTP-NKAQILAE---RLPFPMDCLYAD 164 (259)
Q Consensus 103 vL~f~r~----~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~-~~~~~f~~---~~~fp~~~ll~D 164 (259)
|++|..+ .|||+|..-...|.+ .|+.+..|..+.. +....+.+ ...+|. |+.|
T Consensus 17 vvvy~~g~~~~~~Cp~C~~ak~~L~~-------~~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~--ifi~ 77 (109)
T 1wik_A 17 VMLFMKGNKQEAKCGFSKQILEILNS-------TGVEYETFDILEDEEVRQGLKTFSNWPTYPQ--LYVR 77 (109)
T ss_dssp EEEEESSTTTCCCSSTHHHHHHHHHH-------TCSCEEEEESSSCHHHHHHHHHHHSCCSSCE--EECS
T ss_pred EEEEEecCCCCCCCchHHHHHHHHHH-------cCCCeEEEECCCCHHHHHHHHHHhCCCCCCE--EEEC
Confidence 4456655 899999987666543 5788777777653 33333443 356773 4544
No 251
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=92.85 E-value=0.13 Score=38.31 Aligned_cols=30 Identities=17% Similarity=0.429 Sum_probs=20.0
Q ss_pred EcCCCCHhhHHH-HHHHHHHHHHHhhCC---cEEEEEeCCC
Q 024977 107 LRHFGCPCCWEL-ASALKESKARFDSAG---VKLIAVGVGT 143 (259)
Q Consensus 107 ~r~~~Cp~C~~~-l~~L~~~~~~~~~~g---v~vv~Vs~~~ 143 (259)
|..+|||+|... .+. +++.| +.+..|..+.
T Consensus 30 f~~~~Cp~C~~alk~~-------L~~~~~~~i~~~~vdid~ 63 (118)
T 3c1r_A 30 ASKTYCPYCHAALNTL-------FEKLKVPRSKVLVLQLND 63 (118)
T ss_dssp EECSSCHHHHHHHHHH-------HTTSCCCGGGEEEEEGGG
T ss_pred EEcCCCcCHHHHHHHH-------HHHcCCCCCCeEEEECcc
Confidence 558999999986 333 34455 7766666553
No 252
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=92.79 E-value=0.13 Score=38.89 Aligned_cols=42 Identities=10% Similarity=0.040 Sum_probs=32.7
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCCh
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTP 144 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~ 144 (259)
..|++.||+. |..|+...+.|.++..+++. .+.++-|..+..
T Consensus 24 ~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~g-k~~f~~vd~d~~ 65 (133)
T 2djk_A 24 IPLAYIFAET-AEERKELSDKLKPIAEAQRG-VINFGTIDAKAF 65 (133)
T ss_dssp SCEEEEECSC-SSSHHHHHHHHHHHHHSSTT-TSEEEEECTTTT
T ss_pred CCEEEEEecC-hhhHHHHHHHHHHHHHHhCC-eEEEEEEchHHh
Confidence 3456666788 88999999999999988854 378888887754
No 253
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=92.72 E-value=0.28 Score=33.13 Aligned_cols=44 Identities=20% Similarity=0.424 Sum_probs=27.2
Q ss_pred EcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCC-hHHHHHHHh---hCCCC
Q 024977 107 LRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGT-PNKAQILAE---RLPFP 157 (259)
Q Consensus 107 ~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~-~~~~~~f~~---~~~fp 157 (259)
|...|||+|+.....|.+ .|+.+..+..+. ++...++.+ ...+|
T Consensus 6 y~~~~C~~C~~~~~~l~~-------~~i~~~~~~i~~~~~~~~~~~~~~~~~~vP 53 (82)
T 1fov_A 6 YTKETCPYCHRAKALLSS-------KGVSFQELPIDGNAAKREEMIKRSGRTTVP 53 (82)
T ss_dssp EECSSCHHHHHHHHHHHH-------HTCCCEEEECTTCSHHHHHHHHHHSSCCSC
T ss_pred EECCCChhHHHHHHHHHH-------CCCCcEEEECCCCHHHHHHHHHHhCCCCcC
Confidence 458999999987766654 356655555553 333444544 34667
No 254
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=92.36 E-value=0.21 Score=36.12 Aligned_cols=49 Identities=14% Similarity=0.238 Sum_probs=28.3
Q ss_pred cEEEEEEc----CCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCC-hHHHHHHHh---hCCCC
Q 024977 101 VAVVALLR----HFGCPCCWELASALKESKARFDSAGVKLIAVGVGT-PNKAQILAE---RLPFP 157 (259)
Q Consensus 101 ~vvL~f~r----~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~-~~~~~~f~~---~~~fp 157 (259)
+++ +|+. ..|||+|..-.+.|.+ .|+.+..|..+. ++....+.+ ...+|
T Consensus 18 ~vv-vf~~g~~~~~~C~~C~~~~~~L~~-------~~i~~~~vdi~~~~~~~~~l~~~~g~~~vP 74 (105)
T 2yan_A 18 SVM-LFMKGNKQEAKCGFSKQILEILNS-------TGVEYETFDILEDEEVRQGLKAYSNWPTYP 74 (105)
T ss_dssp SEE-EEESBCSSSBCTTHHHHHHHHHHH-------HTCCCEEEEGGGCHHHHHHHHHHHTCCSSC
T ss_pred CEE-EEEecCCCCCCCccHHHHHHHHHH-------CCCCeEEEECCCCHHHHHHHHHHHCCCCCC
Confidence 544 4554 2899999987666654 356666666553 332233333 34666
No 255
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=92.31 E-value=0.23 Score=36.51 Aligned_cols=33 Identities=21% Similarity=0.420 Sum_probs=21.6
Q ss_pred EEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcE---EEEEeCC
Q 024977 102 AVVALLRHFGCPCCWELASALKESKARFDSAGVK---LIAVGVG 142 (259)
Q Consensus 102 vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~---vv~Vs~~ 142 (259)
.|++ |..+|||+|+...+.|. +.|+. +..|..+
T Consensus 20 ~vv~-f~~~~Cp~C~~~~~~L~-------~~~~~~~~~~~vdi~ 55 (114)
T 2hze_A 20 KVTI-FVKYTCPFCRNALDILN-------KFSFKRGAYEIVDIK 55 (114)
T ss_dssp CEEE-EECTTCHHHHHHHHHHT-------TSCBCTTSEEEEEGG
T ss_pred CEEE-EEeCCChhHHHHHHHHH-------HcCCCcCceEEEEcc
Confidence 3444 45899999997766554 45565 6666654
No 256
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=92.13 E-value=0.42 Score=35.79 Aligned_cols=66 Identities=14% Similarity=0.144 Sum_probs=47.7
Q ss_pred EEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC----ChHHHHHHHhhCCCCCCCcccCCchHHHHHhCCcc
Q 024977 104 VALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG----TPNKAQILAERLPFPMDCLYADPDRKVYNLLGLYH 177 (259)
Q Consensus 104 L~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~----~~~~~~~f~~~~~fp~~~ll~D~~~~~~~~~Gv~~ 177 (259)
+.+|...+|++|+....-|. +.|+.+..+... +.+.++.+.+..+.+.+ -+.+..+..|+.+++..
T Consensus 2 i~iY~~~~C~~c~ka~~~L~-------~~gi~~~~~di~~~~~~~~el~~~l~~~~~~~~-~l~n~~~~~~k~l~~~~ 71 (120)
T 3l78_A 2 VTLFLSPSCTSCRKARAWLN-------RHDVVFQEHNIMTSPLSRDELLKILSYTENGTE-DIISTRSKVFQKLDIDV 71 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHH-------HTTCCEEEEETTTSCCCHHHHHHHHHHCSSTHH-HHBCTTCHHHHHTTCCG
T ss_pred EEEEeCCCCHHHHHHHHHHH-------HcCCCeEEEecccCCCcHHHHHHHHhhcCCCHH-HhhcCCcHHHHHcCCCc
Confidence 45677899999998776554 467777666553 35667888886665533 47778999999999753
No 257
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=92.03 E-value=0.76 Score=34.84 Aligned_cols=65 Identities=14% Similarity=0.201 Sum_probs=45.2
Q ss_pred EEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCC----hHHHHHHHhhCCCCCCCcccCCchHHHHHhCCc
Q 024977 104 VALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGT----PNKAQILAERLPFPMDCLYADPDRKVYNLLGLY 176 (259)
Q Consensus 104 L~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~----~~~~~~f~~~~~fp~~~ll~D~~~~~~~~~Gv~ 176 (259)
+.+|...+||.|+....-|. +.|+.+..+.... .+.++++.+..+.+.. -+.+..+..|+.++..
T Consensus 3 i~lY~~~~C~~C~ka~~~L~-------~~gi~y~~~di~~~~~~~~el~~~l~~~~~~~~-~l~n~~~~~~k~l~~~ 71 (132)
T 1z3e_A 3 VTLYTSPSCTSCRKARAWLE-------EHEIPFVERNIFSEPLSIDEIKQILRMTEDGTD-EIISTRSKVFQKLNVN 71 (132)
T ss_dssp EEEEECTTCHHHHHHHHHHH-------HTTCCEEEEETTTSCCCHHHHHHHHHTCSSCGG-GTBCTTSHHHHHHCCC
T ss_pred EEEEeCCCChHHHHHHHHHH-------HcCCceEEEEccCCCccHHHHHHHHHHcCCCHH-HhhcCCchHHHhcCcc
Confidence 45667899999998766554 4677766665532 3557777775555433 5778889999999875
No 258
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=91.88 E-value=0.35 Score=33.60 Aligned_cols=46 Identities=24% Similarity=0.515 Sum_probs=28.9
Q ss_pred EEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCC-hHHHHHHHh---hCCCC
Q 024977 105 ALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGT-PNKAQILAE---RLPFP 157 (259)
Q Consensus 105 ~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~-~~~~~~f~~---~~~fp 157 (259)
.+|...|||+|+...+.|.+ .|+.+..+..+. ++...++.+ ...+|
T Consensus 9 ~ly~~~~C~~C~~~~~~L~~-------~~i~~~~~di~~~~~~~~~l~~~~~~~~vP 58 (92)
T 2khp_A 9 IIYTRPGCPYCARAKALLAR-------KGAEFNEIDASATPELRAEMQERSGRNTFP 58 (92)
T ss_dssp EEEECTTCHHHHHHHHHHHH-------TTCCCEEEESTTSHHHHHHHHHHHTSSCCC
T ss_pred EEEECCCChhHHHHHHHHHH-------cCCCcEEEECCCCHHHHHHHHHHhCCCCcC
Confidence 34458999999976665543 467777777664 333444544 34667
No 259
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=91.84 E-value=0.093 Score=42.35 Aligned_cols=39 Identities=23% Similarity=0.584 Sum_probs=27.8
Q ss_pred cEEEEEEcCCCCHhhHHHHHHH---HHHHHHHhhCCcEEEEEeC
Q 024977 101 VAVVALLRHFGCPCCWELASAL---KESKARFDSAGVKLIAVGV 141 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L---~~~~~~~~~~gv~vv~Vs~ 141 (259)
++|+.|| .+|||+|....+.+ .++.+++.+ +++++-+..
T Consensus 16 ~~vvef~-d~~Cp~C~~~~~~~~~~~~~~~~~~~-~v~~~~~~~ 57 (189)
T 3l9v_A 16 PAVVEFF-SFYCPPCYAFSQTMGVDQAIRHVLPQ-GSRMVKYHV 57 (189)
T ss_dssp CSEEEEE-CTTCHHHHHHHHTSCHHHHHHTTCCT-TCCEEEEEC
T ss_pred CEEEEEE-CCCChhHHHHhHhccchHHHHHhCCC-CCEEEEEec
Confidence 6777777 89999999998886 455544433 577776544
No 260
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=91.71 E-value=0.14 Score=41.13 Aligned_cols=35 Identities=14% Similarity=0.328 Sum_probs=27.0
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEE
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAV 139 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~V 139 (259)
++|+-|| ..|||+|....+.+.++.+++ ++.+.-+
T Consensus 24 ~~vvef~-d~~Cp~C~~~~~~~~~~~~~~---~v~~~~~ 58 (185)
T 3feu_A 24 APVTEVF-ALSCGHCRNMENFLPVISQEA---GTDIGKM 58 (185)
T ss_dssp CSEEEEE-CTTCHHHHHHGGGHHHHHHHH---TSCCEEE
T ss_pred CEEEEEE-CCCChhHHHhhHHHHHHHHHh---CCeEEEE
Confidence 6666666 799999999989998888877 4554443
No 261
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=91.58 E-value=0.78 Score=34.36 Aligned_cols=67 Identities=13% Similarity=0.258 Sum_probs=48.8
Q ss_pred EEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeC--C--ChHHHHHHHhhCCCCCCCcccCCchHHHHHhCCcc
Q 024977 103 VVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGV--G--TPNKAQILAERLPFPMDCLYADPDRKVYNLLGLYH 177 (259)
Q Consensus 103 vL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~--~--~~~~~~~f~~~~~fp~~~ll~D~~~~~~~~~Gv~~ 177 (259)
.+.+|...+|+.|+....-|. +.|+.+-.+.. + +.+.++.|.+.++.+.+ -+.+..+..|+.+++..
T Consensus 4 Mi~iY~~~~C~~c~ka~~~L~-------~~gi~~~~~di~~~~~~~~eL~~~l~~~g~~~~-~l~n~~~~~~k~l~l~~ 74 (120)
T 3fz4_A 4 MLTFYEYPKCSTCRRAKAELD-------DLAWDYDAIDIKKNPPAASLIRNWLENSGLELK-KFFNTSGQSYRALGLKD 74 (120)
T ss_dssp SEEEEECSSCHHHHHHHHHHH-------HHTCCEEEEETTTSCCCHHHHHHHHHHSCCCGG-GGBCTTSHHHHHTTHHH
T ss_pred eEEEEeCCCChHHHHHHHHHH-------HcCCceEEEEeccCchhHHHHHHHHHHcCCCHH-HHhCCCCcchhhcCccc
Confidence 456777999999998776654 45776655544 3 45678888887776544 57788999999998753
No 262
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=91.46 E-value=0.27 Score=36.77 Aligned_cols=64 Identities=9% Similarity=0.102 Sum_probs=46.4
Q ss_pred EEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC----ChHHHHHHHhhCCCCCCCcccCCchHHHHHhCCcc
Q 024977 104 VALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG----TPNKAQILAERLPFPMDCLYADPDRKVYNLLGLYH 177 (259)
Q Consensus 104 L~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~----~~~~~~~f~~~~~fp~~~ll~D~~~~~~~~~Gv~~ 177 (259)
+.+|...+|+.|+....-|.+ .|+....+... +.+..++|.+.+++. -+.+..+..|+.+|...
T Consensus 7 i~iY~~~~C~~C~ka~~~L~~-------~gi~y~~~di~~~~~~~~~l~~~~~~~g~~---~l~n~~~~~~k~l~~~~ 74 (120)
T 2kok_A 7 VTIYGIKNCDTMKKARIWLED-------HGIDYTFHDYKKEGLDAETLDRFLKTVPWE---QLLNRAGTTFRKLPEDV 74 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHH-------HTCCEEEEEHHHHCCCHHHHHHHHHHSCGG---GTBCSSSHHHHHSCHHH
T ss_pred EEEEECCCChHHHHHHHHHHH-------cCCcEEEEeeeCCCCCHHHHHHHHHHcChH---hhccCCchhhHhcCchh
Confidence 556678999999987766554 56666555442 336677888877875 57788999999998653
No 263
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=91.14 E-value=0.3 Score=43.00 Aligned_cols=42 Identities=12% Similarity=0.063 Sum_probs=34.2
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGT 143 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~ 143 (259)
+.++++|...||+.|....+.|.++..+++.+ +.++.|..+.
T Consensus 136 ~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~-i~f~~vd~~~ 177 (361)
T 3uem_A 136 KTHILLFLPKSVSDYDGKLSNFKTAAESFKGK-ILFIFIDSDH 177 (361)
T ss_dssp CEEEEEECCSSSSSHHHHHHHHHHHHGGGTTT-CEEEEECTTS
T ss_pred CcEEEEEEeCCchhHHHHHHHHHHHHHHccCc-eEEEEecCCh
Confidence 45566666899999999999999999998754 7788887773
No 264
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.84 E-value=0.4 Score=36.15 Aligned_cols=30 Identities=13% Similarity=0.279 Sum_probs=20.7
Q ss_pred EcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCC
Q 024977 107 LRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGT 143 (259)
Q Consensus 107 ~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~ 143 (259)
|...|||+|+...+.|.+. |+.+..|..+.
T Consensus 32 f~~~~Cp~C~~~~~~L~~~-------~i~~~~vdid~ 61 (130)
T 2cq9_A 32 FSKTSCSYCTMAKKLFHDM-------NVNYKVVELDL 61 (130)
T ss_dssp EECSSCSHHHHHHHHHHHH-------TCCCEEEETTT
T ss_pred EEcCCChHHHHHHHHHHHc-------CCCcEEEECcC
Confidence 5589999999877766653 45555555553
No 265
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=90.65 E-value=3 Score=40.18 Aligned_cols=57 Identities=9% Similarity=0.031 Sum_probs=36.0
Q ss_pred CcccCCCCCCcEEec-CCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHH
Q 024977 69 PANVGDLLGDFSIFT-AAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKES 125 (259)
Q Consensus 69 ~~~vG~~aPdf~l~d-~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~ 125 (259)
.+.+|..+|++.+.. .+|+++.+.++....++.++|+|-...-.+.+...+..+.+.
T Consensus 478 ~~~~G~r~p~~~~~~~~~g~~~~l~~~l~~~g~~~ll~~~~~~~~~~~~~~~~~~~~~ 535 (665)
T 1pn0_A 478 NCVVGTRFKSQPVVRHSEGLWMHFGDRLVTDGRFRIIVFAGKATDATQMSRIKKFAAY 535 (665)
T ss_dssp TSCTTSBCCCCEEEETTTTEEEEGGGGCCCSSCEEEEEEEECTTSHHHHHHHHHHHHH
T ss_pred CCCCcCCCCCCeEEecCCCcEEEHhHhhccCCCEEEEEecCCcccchhHHHHHHHHHH
Confidence 356899999999876 589999999977422235566554322224444445555443
No 266
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=90.45 E-value=0.66 Score=34.76 Aligned_cols=65 Identities=15% Similarity=0.210 Sum_probs=47.1
Q ss_pred EEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeC--C--ChHHHHHHHhhCCCCCCCcccCCchHHHHHhCCc
Q 024977 104 VALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGV--G--TPNKAQILAERLPFPMDCLYADPDRKVYNLLGLY 176 (259)
Q Consensus 104 L~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~--~--~~~~~~~f~~~~~fp~~~ll~D~~~~~~~~~Gv~ 176 (259)
+.+|...+|+.|+....-|. +.|+.+-.+.. + +.+.++.|.+.++.+.+ -+.+..+..|+.+|+.
T Consensus 6 i~iY~~p~C~~c~ka~~~L~-------~~gi~~~~~di~~~~~~~~eL~~~l~~~g~~~~-~l~n~~~~~~k~l~l~ 74 (120)
T 3gkx_A 6 TLFLQYPACSTCQKAKKWLI-------ENNIEYTNRLIVDDNPTVEELKAWIPLSGLPVK-KFFNTSGVVYKELKLS 74 (120)
T ss_dssp CEEEECTTCHHHHHHHHHHH-------HTTCCCEEEETTTTCCCHHHHHHHHHHHTSCGG-GGBCTTSHHHHHTTHH
T ss_pred EEEEECCCChHHHHHHHHHH-------HcCCceEEEecccCcCCHHHHHHHHHHcCCCHH-HeEeCCCchhhhcCcc
Confidence 56777999999998776654 46766555544 3 45678888886665533 5777889999999875
No 267
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=90.13 E-value=0.46 Score=36.77 Aligned_cols=66 Identities=9% Similarity=0.135 Sum_probs=47.7
Q ss_pred EEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC----ChHHHHHHHhhCCCCCCCcccCCchHHHHHhCCcc
Q 024977 104 VALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG----TPNKAQILAERLPFPMDCLYADPDRKVYNLLGLYH 177 (259)
Q Consensus 104 L~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~----~~~~~~~f~~~~~fp~~~ll~D~~~~~~~~~Gv~~ 177 (259)
+.+|...+|+.|+....-|. +.|+.+-.+... +.+.++++.+..++|.. -+.+..+..|+.+++..
T Consensus 4 itiY~~p~C~~crkak~~L~-------~~gi~~~~idi~~~~~~~~eL~~~~~~~g~p~~-~l~n~~~~~yk~l~l~~ 73 (141)
T 1s3c_A 4 ITIYHNPASGTSRNTLEMIR-------NSGTEPTIILYLENPPSRDELVKLIADMGISVR-ALLRKNVEPYEQLGLAE 73 (141)
T ss_dssp CEEECCTTCHHHHHHHHHHH-------HTTCCCEEECTTTSCCCHHHHHHHHHHHTSCHH-HHBCSSSHHHHHTTTTS
T ss_pred EEEEECCCChHHHHHHHHHH-------HcCCCEEEEECCCCCccHHHHHHHhcccCCCHH-HhccCCchhHHhcCCcc
Confidence 45677999999998765544 477776666553 34567777777777644 45678999999999865
No 268
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=90.05 E-value=0.23 Score=35.72 Aligned_cols=21 Identities=19% Similarity=0.327 Sum_probs=16.2
Q ss_pred EEEEcCCCCHhhHHHHHHHHH
Q 024977 104 VALLRHFGCPCCWELASALKE 124 (259)
Q Consensus 104 L~f~r~~~Cp~C~~~l~~L~~ 124 (259)
+.+|...|||+|+...+.|.+
T Consensus 24 v~ly~~~~Cp~C~~ak~~L~~ 44 (103)
T 3nzn_A 24 VIMYGLSTCVWCKKTKKLLTD 44 (103)
T ss_dssp EEEEECSSCHHHHHHHHHHHH
T ss_pred EEEEcCCCCchHHHHHHHHHH
Confidence 334568999999998877765
No 269
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=90.02 E-value=0.74 Score=34.43 Aligned_cols=66 Identities=15% Similarity=0.207 Sum_probs=48.5
Q ss_pred EEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeC----CChHHHHHHHhhCCCC-CCCcccCCchHHHHHhCCcc
Q 024977 104 VALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGV----GTPNKAQILAERLPFP-MDCLYADPDRKVYNLLGLYH 177 (259)
Q Consensus 104 L~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~----~~~~~~~~f~~~~~fp-~~~ll~D~~~~~~~~~Gv~~ 177 (259)
+.+|...+|+.|+....-|. +.|+.+-.+.. -+.+.++.|.+.++++ .. -+.+..+..|+.+++..
T Consensus 6 i~iY~~p~C~~c~ka~~~L~-------~~gi~~~~~di~~~~~t~~eL~~~l~~~g~~~~~-~l~n~~~~~~k~l~l~~ 76 (119)
T 3f0i_A 6 VVIYHNPKCSKSRETLALLE-------NQGIAPQVIKYLETSPSVEELKRLYQQLGLNEVR-AMMRCKEELYKELNLGD 76 (119)
T ss_dssp CEEECCTTCHHHHHHHHHHH-------HTTCCCEEECHHHHCCCHHHHHHHHHHHTCSSGG-GGBCTTSHHHHHTTTTC
T ss_pred EEEEECCCChHHHHHHHHHH-------HcCCceEEEEeccCcCcHHHHHHHHHHcCCccHH-HHhcCCCchhhhcCccc
Confidence 56788999999998776655 46776555532 3567788888877765 33 47788999999999864
No 270
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=89.67 E-value=0.25 Score=36.59 Aligned_cols=64 Identities=8% Similarity=-0.026 Sum_probs=45.8
Q ss_pred EEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC----ChHHHHHHHhhCCCCCCCcccCCchHHHHHhCCcc
Q 024977 104 VALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG----TPNKAQILAERLPFPMDCLYADPDRKVYNLLGLYH 177 (259)
Q Consensus 104 L~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~----~~~~~~~f~~~~~fp~~~ll~D~~~~~~~~~Gv~~ 177 (259)
+.+|...+|++|+....-|. +.|+.+..+... +.+.+++|.+..++. -+.+..+..|+.+|...
T Consensus 2 i~iY~~~~C~~C~kak~~L~-------~~gi~~~~~di~~~~~~~~~l~~~~~~~g~~---~l~n~~~~~~k~l~~~~ 69 (114)
T 1rw1_A 2 YVLYGIKACDTMKKARTWLD-------EHKVAYDFHDYKAVGIDREHLRRWCAEHGWQ---TVLNRAGTTFRKLDEAQ 69 (114)
T ss_dssp EEEEECSSCHHHHHHHHHHH-------HTTCCEEEEEHHHHCCCHHHHHHHHHHHCHH---HHBCTTSHHHHTSCHHH
T ss_pred EEEEECCCChHHHHHHHHHH-------HCCCceEEEeecCCCCCHHHHHHHHHhCChH---HhccCCcHhHHhcCccc
Confidence 34566899999997765554 467776666543 236677888777765 57788899999988753
No 271
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=89.62 E-value=0.52 Score=33.62 Aligned_cols=46 Identities=17% Similarity=0.322 Sum_probs=29.5
Q ss_pred EEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCC-hHHHHHHHh----hCCCC
Q 024977 105 ALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGT-PNKAQILAE----RLPFP 157 (259)
Q Consensus 105 ~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~-~~~~~~f~~----~~~fp 157 (259)
..|..+|||+|..--.-| ++.|+...-+..+. ++..+.+.+ ...+|
T Consensus 7 ~vYs~~~Cp~C~~aK~~L-------~~~gi~y~~idi~~d~~~~~~~~~~~~G~~tVP 57 (92)
T 2lqo_A 7 TIYTTSWCGYCLRLKTAL-------TANRIAYDEVDIEHNRAAAEFVGSVNGGNRTVP 57 (92)
T ss_dssp EEEECTTCSSHHHHHHHH-------HHTTCCCEEEETTTCHHHHHHHHHHSSSSSCSC
T ss_pred EEEcCCCCHhHHHHHHHH-------HhcCCceEEEEcCCCHHHHHHHHHHcCCCCEeC
Confidence 335589999999755444 45788887887765 444444444 24577
No 272
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=89.51 E-value=0.49 Score=35.80 Aligned_cols=30 Identities=13% Similarity=0.337 Sum_probs=18.7
Q ss_pred EEcCCCCHhhHHH-HHHHHHHHHHHhhCC---cEEEEEeCC
Q 024977 106 LLRHFGCPCCWEL-ASALKESKARFDSAG---VKLIAVGVG 142 (259)
Q Consensus 106 f~r~~~Cp~C~~~-l~~L~~~~~~~~~~g---v~vv~Vs~~ 142 (259)
+|...|||+|... .+.| ++.| +.+..|..+
T Consensus 41 vy~~~~Cp~C~~a~k~~L-------~~~~~~~i~~~~vdvd 74 (129)
T 3ctg_A 41 VAAKTYCPYCKATLSTLF-------QELNVPKSKALVLELD 74 (129)
T ss_dssp EEECTTCHHHHHHHHHHH-------TTSCCCGGGEEEEEGG
T ss_pred EEECCCCCchHHHHHHHH-------HhcCccCCCcEEEEcc
Confidence 3458999999977 4333 3445 655555544
No 273
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=89.45 E-value=0.49 Score=39.64 Aligned_cols=44 Identities=16% Similarity=0.149 Sum_probs=31.3
Q ss_pred CcEEEEEEcCCC--CHhhHHHHHHHHHHHHHHhh-CC---cEEEEEeCCCh
Q 024977 100 GVAVVALLRHFG--CPCCWELASALKESKARFDS-AG---VKLIAVGVGTP 144 (259)
Q Consensus 100 ~~vvL~f~r~~~--Cp~C~~~l~~L~~~~~~~~~-~g---v~vv~Vs~~~~ 144 (259)
+|++|.|| ..| |+.|+...+.+.++..+... +| +.++.+..+..
T Consensus 26 ~pv~v~~~-~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~ 75 (243)
T 2hls_A 26 NPVEVHVF-LSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESD 75 (243)
T ss_dssp SCEEEEEE-ECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTT
T ss_pred CCEEEEEE-eCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcC
Confidence 47887777 777 99999998888888766421 22 66766765543
No 274
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=89.35 E-value=0.8 Score=33.55 Aligned_cols=33 Identities=15% Similarity=0.268 Sum_probs=21.6
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG 142 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~ 142 (259)
+++| |..+|||+|..-...|.+ .|+..-.+..+
T Consensus 18 ~v~v--y~~~~Cp~C~~ak~~L~~-------~~i~~~~~dvd 50 (114)
T 3h8q_A 18 RVVI--FSKSYCPHSTRVKELFSS-------LGVECNVLELD 50 (114)
T ss_dssp SEEE--EECTTCHHHHHHHHHHHH-------TTCCCEEEETT
T ss_pred CEEE--EEcCCCCcHHHHHHHHHH-------cCCCcEEEEec
Confidence 4444 457999999877666554 46665555555
No 275
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=88.91 E-value=0.28 Score=35.78 Aligned_cols=29 Identities=24% Similarity=0.460 Sum_probs=19.1
Q ss_pred EcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC
Q 024977 107 LRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG 142 (259)
Q Consensus 107 ~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~ 142 (259)
|...|||+|..-.+-|.+ .|+..-.+..+
T Consensus 24 y~~~~Cp~C~~~~~~L~~-------~~i~~~~~di~ 52 (113)
T 3rhb_A 24 YSKTWCSYCTEVKTLFKR-------LGVQPLVVELD 52 (113)
T ss_dssp EECTTCHHHHHHHHHHHH-------TTCCCEEEEGG
T ss_pred EECCCChhHHHHHHHHHH-------cCCCCeEEEee
Confidence 558999999977766654 45554444443
No 276
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=88.89 E-value=1.5 Score=30.19 Aligned_cols=30 Identities=10% Similarity=0.042 Sum_probs=20.6
Q ss_pred EEcCC----CCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC
Q 024977 106 LLRHF----GCPCCWELASALKESKARFDSAGVKLIAVGVG 142 (259)
Q Consensus 106 f~r~~----~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~ 142 (259)
+|... |||+|..-..-|. +.|+..-.+..+
T Consensus 4 iY~~~~~~~~Cp~C~~ak~~L~-------~~gi~y~~idI~ 37 (87)
T 1aba_A 4 VYGYDSNIHKCGPCDNAKRLLT-------VKKQPFEFINIM 37 (87)
T ss_dssp EEECCTTTSCCHHHHHHHHHHH-------HTTCCEEEEESC
T ss_pred EEEeCCCCCcCccHHHHHHHHH-------HcCCCEEEEEee
Confidence 44578 9999987655544 467776666665
No 277
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=88.36 E-value=0.51 Score=36.20 Aligned_cols=54 Identities=20% Similarity=0.358 Sum_probs=32.4
Q ss_pred EEEEEcC----CCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCC-hHHHHHHHh---hCCCCCCCcccCC
Q 024977 103 VVALLRH----FGCPCCWELASALKESKARFDSAGVKLIAVGVGT-PNKAQILAE---RLPFPMDCLYADP 165 (259)
Q Consensus 103 vL~f~r~----~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~-~~~~~~f~~---~~~fp~~~ll~D~ 165 (259)
|++|..+ .|||+|..-...|. +.|+.+..|..+. ++....+.+ ...+|. |+.|.
T Consensus 37 Vvvy~ks~~~~~~Cp~C~~ak~~L~-------~~gv~y~~vdI~~d~~~~~~L~~~~G~~tvP~--VfI~G 98 (135)
T 2wci_A 37 ILLYMKGSPKLPSCGFSAQAVQALA-------ACGERFAYVDILQNPDIRAELPKYANWPTFPQ--LWVDG 98 (135)
T ss_dssp EEEEESBCSSSBSSHHHHHHHHHHH-------TTCSCCEEEEGGGCHHHHHHHHHHHTCCSSCE--EEETT
T ss_pred EEEEEEecCCCCCCccHHHHHHHHH-------HcCCceEEEECCCCHHHHHHHHHHHCCCCcCE--EEECC
Confidence 4455555 79999997665554 4577766666643 333334443 356774 56654
No 278
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=88.25 E-value=0.66 Score=39.14 Aligned_cols=39 Identities=13% Similarity=0.045 Sum_probs=28.8
Q ss_pred cEEEEEEcC--CCCHhhHHHHHHHHHHHHHHhh-CCcEEEEEeCCC
Q 024977 101 VAVVALLRH--FGCPCCWELASALKESKARFDS-AGVKLIAVGVGT 143 (259)
Q Consensus 101 ~vvL~f~r~--~~Cp~C~~~l~~L~~~~~~~~~-~gv~vv~Vs~~~ 143 (259)
+.+|+.|++ +||+ ..|.+.++..++.. .++.++.|..++
T Consensus 23 ~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~ 64 (240)
T 2qc7_A 23 KFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISD 64 (240)
T ss_dssp SEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCC
T ss_pred CCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCc
Confidence 456666668 9999 77888888888764 467888888654
No 279
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=87.97 E-value=3.7 Score=39.24 Aligned_cols=40 Identities=13% Similarity=0.093 Sum_probs=28.5
Q ss_pred cccCCCCCCcEEec-CCCCeEecccccccCCCcEEEEEEcCC
Q 024977 70 ANVGDLLGDFSIFT-AAGEPVLFKDLWDQNEGVAVVALLRHF 110 (259)
Q Consensus 70 ~~vG~~aPdf~l~d-~~G~~v~lsdl~~~~~~~vvL~f~r~~ 110 (259)
+.+|..+|+..+.. .+|+++++.|+....++.++|. |.+.
T Consensus 467 ~~~G~r~p~~~~~~~~~g~~~~l~~~~~~~g~~~ll~-~~~~ 507 (639)
T 2dkh_A 467 FTVGMRFHSAPVVRVCDAKPVQLGHCGKADGRWRLYA-FAAQ 507 (639)
T ss_dssp SCTTSBCCCCEEEETTTCCEEEGGGGCCSSSCEEEEE-ECCT
T ss_pred CCCcCCCCCCeEEecCCCCEEEHHHhhccCCCEEEEE-ecCC
Confidence 56899999999875 5899999999874222355555 4443
No 280
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=87.65 E-value=1.1 Score=33.30 Aligned_cols=55 Identities=22% Similarity=0.281 Sum_probs=31.7
Q ss_pred EEEEEEcC----CCCHhhHHHHHHHHHHHHHHhhCCcE-EEEEeCCChHHH-HHHHh---hCCCCCCCcccCC
Q 024977 102 AVVALLRH----FGCPCCWELASALKESKARFDSAGVK-LIAVGVGTPNKA-QILAE---RLPFPMDCLYADP 165 (259)
Q Consensus 102 vvL~f~r~----~~Cp~C~~~l~~L~~~~~~~~~~gv~-vv~Vs~~~~~~~-~~f~~---~~~fp~~~ll~D~ 165 (259)
-|++|-.. +|||+|..-..-|.+ .|+. +..+..+..... ..+.+ ...+|. |+.|.
T Consensus 21 ~Vvvfsk~t~~~p~Cp~C~~ak~lL~~-------~gv~~~~~vdV~~d~~~~~~l~~~tg~~tvP~--vfI~g 84 (118)
T 2wem_A 21 KVVVFLKGTPEQPQCGFSNAVVQILRL-------HGVRDYAAYNVLDDPELRQGIKDYSNWPTIPQ--VYLNG 84 (118)
T ss_dssp SEEEEESBCSSSBSSHHHHHHHHHHHH-------TTCCCCEEEESSSCHHHHHHHHHHHTCCSSCE--EEETT
T ss_pred CEEEEEecCCCCCccHHHHHHHHHHHH-------cCCCCCEEEEcCCCHHHHHHHHHHhCCCCcCe--EEECC
Confidence 35556655 499999987666554 5663 555555543333 33333 456774 56664
No 281
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=87.27 E-value=0.17 Score=44.15 Aligned_cols=39 Identities=13% Similarity=0.197 Sum_probs=27.6
Q ss_pred CeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHH
Q 024977 87 EPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARF 129 (259)
Q Consensus 87 ~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~ 129 (259)
..+.+.+...+ ..++.| .++|||+|+...|.+.+..+++
T Consensus 188 ~~~~la~~l~~---~~vV~F-~A~WC~~Ck~l~p~le~lA~~l 226 (291)
T 3kp9_A 188 LAVGLAAHLRQ---IGGTMY-GAYWCPHCQDQKELFGAAFDQV 226 (291)
T ss_dssp THHHHHHHHHH---TTCEEE-ECTTCHHHHHHHHHHGGGGGGS
T ss_pred HHHHHHHHhCC---CCEEEE-ECCCCHHHHHHHHHHHHHHHHc
Confidence 44566666654 334444 5999999999999998876544
No 282
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=86.93 E-value=1.4 Score=37.27 Aligned_cols=39 Identities=13% Similarity=-0.009 Sum_probs=29.6
Q ss_pred cEEEEEEc--CCCCHhhHHHHHHHHHHHHHHhh--CCcEEEEEeCCC
Q 024977 101 VAVVALLR--HFGCPCCWELASALKESKARFDS--AGVKLIAVGVGT 143 (259)
Q Consensus 101 ~vvL~f~r--~~~Cp~C~~~l~~L~~~~~~~~~--~gv~vv~Vs~~~ 143 (259)
+.||+.|+ ++||+ ..|.+.++..++.. ..+.++-|.++.
T Consensus 34 ~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~ 76 (248)
T 2c0g_A 34 PYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKD 76 (248)
T ss_dssp SEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECS
T ss_pred CCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCc
Confidence 45666666 99998 78888888888864 468888888766
No 283
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=86.92 E-value=1.8 Score=32.19 Aligned_cols=55 Identities=22% Similarity=0.284 Sum_probs=31.6
Q ss_pred EEEEEEcC----CCCHhhHHHHHHHHHHHHHHhhCCcE---EEEEeCCChHHH-HHHHh---hCCCCCCCcccCC
Q 024977 102 AVVALLRH----FGCPCCWELASALKESKARFDSAGVK---LIAVGVGTPNKA-QILAE---RLPFPMDCLYADP 165 (259)
Q Consensus 102 vvL~f~r~----~~Cp~C~~~l~~L~~~~~~~~~~gv~---vv~Vs~~~~~~~-~~f~~---~~~fp~~~ll~D~ 165 (259)
-|++|-.. +|||+|..-..-|.+ .|+. +..+..+..... ..+.+ ...+|. |+.|.
T Consensus 17 ~Vvvfsk~t~~~p~Cp~C~~ak~lL~~-------~gv~~~~~~~~dv~~~~~~~~~l~~~sg~~tvP~--vfI~g 82 (121)
T 3gx8_A 17 PVVLFMKGTPEFPKCGFSRATIGLLGN-------QGVDPAKFAAYNVLEDPELREGIKEFSEWPTIPQ--LYVNK 82 (121)
T ss_dssp SEEEEESBCSSSBCTTHHHHHHHHHHH-------HTBCGGGEEEEECTTCHHHHHHHHHHHTCCSSCE--EEETT
T ss_pred CEEEEEeccCCCCCCccHHHHHHHHHH-------cCCCcceEEEEEecCCHHHHHHHHHHhCCCCCCe--EEECC
Confidence 35555555 499999988766655 3555 555555443333 33333 356774 56654
No 284
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=86.61 E-value=0.5 Score=36.61 Aligned_cols=18 Identities=11% Similarity=0.383 Sum_probs=14.6
Q ss_pred EcCCCCHhhHHHHHHHHH
Q 024977 107 LRHFGCPCCWELASALKE 124 (259)
Q Consensus 107 ~r~~~Cp~C~~~l~~L~~ 124 (259)
|...|||+|+...+.|.+
T Consensus 54 f~~~~Cp~C~~~k~~L~~ 71 (146)
T 2ht9_A 54 FSKTSCSYCTMAKKLFHD 71 (146)
T ss_dssp EECTTCHHHHHHHHHHHH
T ss_pred EECCCChhHHHHHHHHHH
Confidence 558999999987777665
No 285
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=86.33 E-value=0.42 Score=33.18 Aligned_cols=21 Identities=29% Similarity=0.436 Sum_probs=15.2
Q ss_pred EEEEcCCCCHhhHHHHHHHHH
Q 024977 104 VALLRHFGCPCCWELASALKE 124 (259)
Q Consensus 104 L~f~r~~~Cp~C~~~l~~L~~ 124 (259)
+.+|...|||+|+.....|.+
T Consensus 14 v~ly~~~~Cp~C~~~~~~L~~ 34 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTLEFLKR 34 (92)
T ss_dssp SEEEECTTCHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHH
Confidence 334568999999987666654
No 286
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=86.05 E-value=0.69 Score=35.86 Aligned_cols=34 Identities=24% Similarity=0.473 Sum_probs=24.5
Q ss_pred CcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEE
Q 024977 100 GVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAV 139 (259)
Q Consensus 100 ~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~V 139 (259)
++++|+.|--++||+|+...+.|.++ ..++++.+
T Consensus 14 a~~~vv~f~D~~Cp~C~~~~~~l~~l------~~v~v~~~ 47 (147)
T 3gv1_A 14 GKLKVAVFSDPDCPFCKRLEHEFEKM------TDVTVYSF 47 (147)
T ss_dssp CCEEEEEEECTTCHHHHHHHHHHTTC------CSEEEEEE
T ss_pred CCEEEEEEECCCChhHHHHHHHHhhc------CceEEEEE
Confidence 36666666799999999998887653 34666543
No 287
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=86.03 E-value=0.57 Score=37.81 Aligned_cols=38 Identities=24% Similarity=0.596 Sum_probs=26.5
Q ss_pred cEEEEEEcCCCCHhhHHHHHHH---HHHHHHHhhCCcEEEEEe
Q 024977 101 VAVVALLRHFGCPCCWELASAL---KESKARFDSAGVKLIAVG 140 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L---~~~~~~~~~~gv~vv~Vs 140 (259)
++|+.|+ ..+||+|...-+.| .++.+++.+ +++++-+.
T Consensus 23 ~~vvef~-d~~Cp~C~~~~~~l~~~~~l~~~~~~-~v~~~~~~ 63 (191)
T 3l9s_A 23 PQVLEFF-SFYCPHCYQFEEVLHVSDNVKKKLPE-GTKMTKYH 63 (191)
T ss_dssp SCEEEEE-CTTCHHHHHHHHTSCHHHHHHHHSCT-TCCEEEEE
T ss_pred CeEEEEE-CCCChhHHHhChhccchHHHHHhCCC-CcEEEEEe
Confidence 5666665 88999999988876 466666543 46666543
No 288
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=85.92 E-value=0.57 Score=31.97 Aligned_cols=21 Identities=24% Similarity=0.468 Sum_probs=15.2
Q ss_pred EEEEEcCCCCHhhHHHHHHHH
Q 024977 103 VVALLRHFGCPCCWELASALK 123 (259)
Q Consensus 103 vL~f~r~~~Cp~C~~~l~~L~ 123 (259)
.+.+|...|||+|+.....|.
T Consensus 5 ~v~ly~~~~Cp~C~~~~~~L~ 25 (89)
T 3msz_A 5 KVKIYTRNGCPYCVWAKQWFE 25 (89)
T ss_dssp CEEEEECTTCHHHHHHHHHHH
T ss_pred EEEEEEcCCChhHHHHHHHHH
Confidence 355666899999998665544
No 289
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=85.85 E-value=1.4 Score=32.08 Aligned_cols=55 Identities=25% Similarity=0.254 Sum_probs=31.8
Q ss_pred EEEEEEcC----CCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCC-hHHHHHHHh---hCCCCCCCcccCC
Q 024977 102 AVVALLRH----FGCPCCWELASALKESKARFDSAGVKLIAVGVGT-PNKAQILAE---RLPFPMDCLYADP 165 (259)
Q Consensus 102 vvL~f~r~----~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~-~~~~~~f~~---~~~fp~~~ll~D~ 165 (259)
-|++|... +|||+|..-..-|.+ .|+....+..+. ++....+.+ ...+|. ++.|.
T Consensus 19 ~Vvvy~k~t~~~p~Cp~C~~ak~~L~~-------~gi~~~~~dI~~~~~~~~~l~~~~g~~tvP~--ifi~g 81 (109)
T 3ipz_A 19 KVVLFMKGTRDFPMCGFSNTVVQILKN-------LNVPFEDVNILENEMLRQGLKEYSNWPTFPQ--LYIGG 81 (109)
T ss_dssp SEEEEESBCSSSBSSHHHHHHHHHHHH-------TTCCCEEEEGGGCHHHHHHHHHHHTCSSSCE--EEETT
T ss_pred CEEEEEecCCCCCCChhHHHHHHHHHH-------cCCCcEEEECCCCHHHHHHHHHHHCCCCCCe--EEECC
Confidence 35555555 499999987766554 566666665543 332333333 356773 55554
No 290
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=83.42 E-value=1.6 Score=31.91 Aligned_cols=47 Identities=15% Similarity=0.246 Sum_probs=27.7
Q ss_pred CCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCC-hHHHHHHHh---hCCCCCCCcccCC
Q 024977 110 FGCPCCWELASALKESKARFDSAGVKLIAVGVGT-PNKAQILAE---RLPFPMDCLYADP 165 (259)
Q Consensus 110 ~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~-~~~~~~f~~---~~~fp~~~ll~D~ 165 (259)
+|||+|..-..-|.+ .|+....+..+. ++....+.+ ...+|. |+.|.
T Consensus 29 ~~Cp~C~~ak~~L~~-------~gi~y~~~di~~d~~~~~~l~~~~g~~tvP~--ifi~g 79 (111)
T 3zyw_A 29 PRCGFSKQMVEILHK-------HNIQFSSFDIFSDEEVRQGLKAYSSWPTYPQ--LYVSG 79 (111)
T ss_dssp BSSHHHHHHHHHHHH-------TTCCCEEEEGGGCHHHHHHHHHHHTCCSSCE--EEETT
T ss_pred CcchhHHHHHHHHHH-------cCCCeEEEECcCCHHHHHHHHHHHCCCCCCE--EEECC
Confidence 899999987766554 566666565543 333333333 356774 55553
No 291
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=83.23 E-value=1.3 Score=35.46 Aligned_cols=40 Identities=15% Similarity=0.157 Sum_probs=30.5
Q ss_pred CcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEE
Q 024977 100 GVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAV 139 (259)
Q Consensus 100 ~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~V 139 (259)
.|++|+.|--+.||+|....+.+.+...++....|+++..
T Consensus 14 a~vtiv~f~D~~Cp~C~~~~~~~~~~l~~~~~g~v~~v~r 53 (182)
T 3gn3_A 14 GPRLFEVFLEPTCPFSVKAFFKLDDLLAQAGEDNVTVRIR 53 (182)
T ss_dssp CSEEEEEEECTTCHHHHHHHTTHHHHHHHHCTTTEEEEEE
T ss_pred CCEEEEEEECCCCHhHHHHHHHHHHHHHHhCCCCEEEEEE
Confidence 4788888889999999998888887766652335777764
No 292
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=82.78 E-value=8.8 Score=35.45 Aligned_cols=35 Identities=17% Similarity=0.078 Sum_probs=26.5
Q ss_pred CCcccCCCCCCcEEecCCCCeEecccccccCCCcEEEEE
Q 024977 68 FPANVGDLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVAL 106 (259)
Q Consensus 68 ~~~~vG~~aPdf~l~d~~G~~v~lsdl~~~~~~~vvL~f 106 (259)
....+|..+|+.-+.. +|+.+++-|+.|. + .+|+.
T Consensus 418 ~~~~pG~r~p~~~l~~-~~~~~~~~dl~g~--~-f~ll~ 452 (535)
T 3ihg_A 418 PSGRPGFRGPHVLVSR-HGERLSTVDLFGD--G-WTLLA 452 (535)
T ss_dssp CCCCTTSBCCCCEEEE-TTEEEEGGGGCSS--S-EEEEE
T ss_pred CCCCCCCcCCCceeec-CCceeeHHHhcCC--c-eEEEe
Confidence 3457899999998854 5888999999986 4 44444
No 293
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=82.44 E-value=1.8 Score=34.14 Aligned_cols=40 Identities=23% Similarity=0.461 Sum_probs=28.1
Q ss_pred CcEEEEEEcCCCCHhhHHHHHHHH-HHHHHHhh-CCcEEEEE
Q 024977 100 GVAVVALLRHFGCPCCWELASALK-ESKARFDS-AGVKLIAV 139 (259)
Q Consensus 100 ~~vvL~f~r~~~Cp~C~~~l~~L~-~~~~~~~~-~gv~vv~V 139 (259)
.++.|..|.-.-||+|....+.+. .+..++.+ .+++++-.
T Consensus 11 a~~~i~~f~D~~Cp~C~~~~~~l~~~l~~~~~~~~~v~~~~~ 52 (186)
T 3bci_A 11 GKPLVVVYGDYKCPYCKELDEKVMPKLRKNYIDNHKVEYQFV 52 (186)
T ss_dssp CCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSSEEEEE
T ss_pred CCeEEEEEECCCChhHHHHHHHHHHHHHHHhccCCeEEEEEE
Confidence 366666666999999999988884 45555543 34777664
No 294
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=81.78 E-value=4.4 Score=29.38 Aligned_cols=45 Identities=4% Similarity=0.015 Sum_probs=25.5
Q ss_pred EEcCCCCHhhHH--HHHHHHHHHHHHhhCCcEEEEEeCCChHHH-HHHHhh
Q 024977 106 LLRHFGCPCCWE--LASALKESKARFDSAGVKLIAVGVGTPNKA-QILAER 153 (259)
Q Consensus 106 f~r~~~Cp~C~~--~l~~L~~~~~~~~~~gv~vv~Vs~~~~~~~-~~f~~~ 153 (259)
+|...+||+|.. ...... ..|++.|+.+..|..+..... +.+.+.
T Consensus 12 vy~~~~C~~C~~~~~~~~ak---~~L~~~gi~y~~vdI~~~~~~~~~l~~~ 59 (111)
T 2ct6_A 12 VFIASSSGFVAIKKKQQDVV---RFLEANKIEFEEVDITMSEEQRQWMYKN 59 (111)
T ss_dssp EEECSSCSCHHHHHHHHHHH---HHHHHTTCCEEEEETTTCHHHHHHHHHS
T ss_pred EEEcCCCCCcccchhHHHHH---HHHHHcCCCEEEEECCCCHHHHHHHHHH
Confidence 344789999994 111222 234557888888877654333 334433
No 295
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=81.51 E-value=2 Score=33.37 Aligned_cols=37 Identities=22% Similarity=0.452 Sum_probs=27.3
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEE
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAV 139 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~V 139 (259)
++|+-|+ -..||+|...-+.+.++..++.+ ++.++-+
T Consensus 23 ~~vvEf~-dy~Cp~C~~~~~~~~~l~~~~~~-~~~~~~~ 59 (184)
T 4dvc_A 23 PVVSEFF-SFYCPHCNTFEPIIAQLKQQLPE-GAKFQKN 59 (184)
T ss_dssp CEEEEEE-CTTCHHHHHHHHHHHHHHHTSCT-TCEEEEE
T ss_pred CEEEEEE-CCCCHhHHHHhHHHHHHHhhcCC-ceEEEEE
Confidence 6777777 69999999988888888777644 3455443
No 296
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=80.88 E-value=4 Score=31.94 Aligned_cols=39 Identities=13% Similarity=0.453 Sum_probs=27.8
Q ss_pred cEEEEEEcCCCCHhhHHHHHHH-HHHHHHHhhCCcEEEEEeC
Q 024977 101 VAVVALLRHFGCPCCWELASAL-KESKARFDSAGVKLIAVGV 141 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L-~~~~~~~~~~gv~vv~Vs~ 141 (259)
++++.|| ...||+|....+.+ .++..++. ..+++..+..
T Consensus 19 ~~~ief~-d~~CP~C~~~~~~l~~~l~~~~~-~~v~~~~~~l 58 (195)
T 3c7m_A 19 KTLIKVF-SYACPFCYKYDKAVTGPVSEKVK-DIVAFTPFHL 58 (195)
T ss_dssp TEEEEEE-CTTCHHHHHHHHHTHHHHHHHTT-TTCEEEEEEC
T ss_pred cEEEEEE-eCcCcchhhCcHHHHHHHHHhCC-CceEEEEEec
Confidence 4566665 59999999998888 77766654 3466666543
No 297
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=79.69 E-value=2.6 Score=36.33 Aligned_cols=39 Identities=18% Similarity=0.364 Sum_probs=27.2
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVG 142 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~ 142 (259)
+.+|+.|.-+.||+|+...+.+.+... +..|.++.+..-
T Consensus 148 k~~I~vFtDp~CPYCkkl~~~l~~~l~---~~~Vr~i~~Pil 186 (273)
T 3tdg_A 148 DKILYIVSDPMCPHCQKELTKLRDHLK---ENTVRMVVVGWL 186 (273)
T ss_dssp TCEEEEEECTTCHHHHHHHHTHHHHHH---HCEEEEEECCCS
T ss_pred CeEEEEEECcCChhHHHHHHHHHHHhh---CCcEEEEEeecc
Confidence 444455559999999999999987554 355666665443
No 298
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=79.66 E-value=3.2 Score=33.78 Aligned_cols=41 Identities=7% Similarity=0.143 Sum_probs=29.1
Q ss_pred CcEEEEEEcCCCCHhhHHHHHHHHHHHH-HH-hhCCcEEEEEe
Q 024977 100 GVAVVALLRHFGCPCCWELASALKESKA-RF-DSAGVKLIAVG 140 (259)
Q Consensus 100 ~~vvL~f~r~~~Cp~C~~~l~~L~~~~~-~~-~~~gv~vv~Vs 140 (259)
.|++|+.|--+-||+|....+.+..... ++ +...|+++...
T Consensus 15 a~vtivef~D~~Cp~C~~~~~~~~~~l~~~~i~~g~v~~v~r~ 57 (205)
T 3gmf_A 15 AKLRLVEFVSYTCPHCSHFEIESEGQLKIGMVQPGKGAIEVRN 57 (205)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSEEEEEEE
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHHhccCCeEEEEEEe
Confidence 4777777779999999998877765554 55 34456766543
No 299
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=77.64 E-value=3.5 Score=34.10 Aligned_cols=40 Identities=10% Similarity=0.159 Sum_probs=27.3
Q ss_pred CcEEEEEEcCCCCHhhHHHHHHH-HHHHHHHh-hCCcEEEEE
Q 024977 100 GVAVVALLRHFGCPCCWELASAL-KESKARFD-SAGVKLIAV 139 (259)
Q Consensus 100 ~~vvL~f~r~~~Cp~C~~~l~~L-~~~~~~~~-~~gv~vv~V 139 (259)
.|+.|+.|--+.||+|...-+.+ .++.+++- ...|+++-.
T Consensus 39 A~vtIvef~Dy~CP~C~~~~~~~~~~l~~~~~~~g~V~~v~~ 80 (226)
T 3f4s_A 39 APILMIEYASLTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFR 80 (226)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHTHHHHHHHHTTTTSEEEEEE
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHHcccCCeEEEEEE
Confidence 36666666689999999987764 55555553 335776654
No 300
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=76.64 E-value=3.9 Score=28.41 Aligned_cols=35 Identities=9% Similarity=-0.045 Sum_probs=19.7
Q ss_pred EcCCCCHhhHH--HHHHHHHHHHHHhhCCcEEEEEeCCCh
Q 024977 107 LRHFGCPCCWE--LASALKESKARFDSAGVKLIAVGVGTP 144 (259)
Q Consensus 107 ~r~~~Cp~C~~--~l~~L~~~~~~~~~~gv~vv~Vs~~~~ 144 (259)
|..++||+|.. .-.... .-+++.|+.+..+..+..
T Consensus 7 y~~~~C~~c~~~~~~~~ak---~~L~~~~i~~~~~di~~~ 43 (93)
T 1t1v_A 7 YSTSVTGSREIKSQQSEVT---RILDGKRIQYQLVDISQD 43 (93)
T ss_dssp EECSSCSCHHHHHHHHHHH---HHHHHTTCCCEEEETTSC
T ss_pred EEcCCCCCchhhHHHHHHH---HHHHHCCCceEEEECCCC
Confidence 34789999941 111111 124457787777766543
No 301
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=75.84 E-value=4.8 Score=32.47 Aligned_cols=41 Identities=22% Similarity=0.376 Sum_probs=27.2
Q ss_pred CcEEEEEEcCCCCHhhHHHHHHHH-HHHHHHhh-CCcEEEEEe
Q 024977 100 GVAVVALLRHFGCPCCWELASALK-ESKARFDS-AGVKLIAVG 140 (259)
Q Consensus 100 ~~vvL~f~r~~~Cp~C~~~l~~L~-~~~~~~~~-~gv~vv~Vs 140 (259)
.|+.|+.|--+.||+|...-+.+. .+.+++-+ ..|+++-..
T Consensus 29 a~vtvvef~D~~CP~C~~~~~~~~~~l~~~~~~~g~v~~~~~~ 71 (202)
T 3gha_A 29 APVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVN 71 (202)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTTSEEEEEEE
T ss_pred CCEEEEEEECCCChhHHHHHHHhhHHHHHHhccCCeEEEEEEe
Confidence 366666666999999999877663 33344432 357777654
No 302
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=71.97 E-value=3.8 Score=33.70 Aligned_cols=47 Identities=19% Similarity=0.468 Sum_probs=26.1
Q ss_pred EEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCChHHHHHHHh---hCCCC
Q 024977 104 VALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTPNKAQILAE---RLPFP 157 (259)
Q Consensus 104 L~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~~~~~~f~~---~~~fp 157 (259)
+.+|...|||+|..-...|.+ .|+....+..+......++.+ ...+|
T Consensus 172 i~ly~~~~Cp~C~~a~~~L~~-------~~i~~~~~~i~~~~~~~~l~~~~g~~~vP 221 (241)
T 1nm3_A 172 ISIFTKPGCPFCAKAKQLLHD-------KGLSFEEIILGHDATIVSVRAVSGRTTVP 221 (241)
T ss_dssp EEEEECSSCHHHHHHHHHHHH-------HTCCCEEEETTTTCCHHHHHHHTCCSSSC
T ss_pred EEEEECCCChHHHHHHHHHHH-------cCCceEEEECCCchHHHHHHHHhCCCCcC
Confidence 444557899999977655554 355555554443222234443 23566
No 303
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=69.98 E-value=11 Score=28.07 Aligned_cols=62 Identities=19% Similarity=0.225 Sum_probs=33.1
Q ss_pred ccccccCCCcEEEEEEcC----CCCHhhHHHHHHHHHHHHHHhhCCcE-EEEEeCCChHHHHHHHh----hCCCCCCCcc
Q 024977 92 KDLWDQNEGVAVVALLRH----FGCPCCWELASALKESKARFDSAGVK-LIAVGVGTPNKAQILAE----RLPFPMDCLY 162 (259)
Q Consensus 92 sdl~~~~~~~vvL~f~r~----~~Cp~C~~~l~~L~~~~~~~~~~gv~-vv~Vs~~~~~~~~~f~~----~~~fp~~~ll 162 (259)
.++..+ .++|| |.-+ +.||+|..-..-|. ..|+. ...+...+...+++... .-.+|- ||
T Consensus 14 ~~~i~~--~~Vvv-F~Kgt~~~P~C~fc~~ak~lL~-------~~gv~~~~~~~v~~~~~~r~~l~~~sg~~TvPq--IF 81 (118)
T 2wul_A 14 DALVKK--DKVVV-FLKGTPEQPQCGFSNAVVQILR-------LHGVRDYAAYNVLDDPELRQGIKDYSNWPTIPQ--VY 81 (118)
T ss_dssp HHHHHH--SSEEE-EESBCSSSBSSHHHHHHHHHHH-------HTTCCSCEEEETTSCHHHHHHHHHHHTCCSSCE--EE
T ss_pred HHHHhc--CCEEE-EEcCCCCCCCCHHHHHHHHHHH-------HhCCcCeEeecccCCHHHHHHHHHhccCCCCCe--Ee
Confidence 344444 25554 4444 47999988766554 35653 45555544333444333 345663 66
Q ss_pred cCC
Q 024977 163 ADP 165 (259)
Q Consensus 163 ~D~ 165 (259)
.+.
T Consensus 82 I~g 84 (118)
T 2wul_A 82 LNG 84 (118)
T ss_dssp ETT
T ss_pred ECC
Confidence 654
No 304
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=69.54 E-value=10 Score=28.42 Aligned_cols=48 Identities=2% Similarity=0.004 Sum_probs=28.3
Q ss_pred EEEEcCCCCHhhHH--HHHHHHHHHHHHhhCCcEEEEEeCC-ChHHHHHHHhhC
Q 024977 104 VALLRHFGCPCCWE--LASALKESKARFDSAGVKLIAVGVG-TPNKAQILAERL 154 (259)
Q Consensus 104 L~f~r~~~Cp~C~~--~l~~L~~~~~~~~~~gv~vv~Vs~~-~~~~~~~f~~~~ 154 (259)
|..|-.+.||+|.. .-..... -|+.+||.+--|..+ +++..+.+.+..
T Consensus 2 V~vYtt~~c~~c~~kk~c~~aK~---lL~~kgV~feEidI~~d~~~r~eM~~~~ 52 (121)
T 1u6t_A 2 IRVYIASSSGSTAIKKKQQDVLG---FLEANKIGFEEKDIAANEENRKWMRENV 52 (121)
T ss_dssp EEEEECTTCSCHHHHHHHHHHHH---HHHHTTCCEEEEECTTCHHHHHHHHHHS
T ss_pred EEEEecCCCCCccchHHHHHHHH---HHHHCCCceEEEECCCCHHHHHHHHHhc
Confidence 44555899999952 2222222 256788988888776 444444444444
No 305
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=68.65 E-value=3.8 Score=30.79 Aligned_cols=56 Identities=13% Similarity=0.116 Sum_probs=30.3
Q ss_pred EEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCc--EEEEEeCC-ChHHHHHHHh----hCCCCCCCcccCC
Q 024977 103 VVALLRHFGCPCCWELASALKESKARFDSAGV--KLIAVGVG-TPNKAQILAE----RLPFPMDCLYADP 165 (259)
Q Consensus 103 vL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv--~vv~Vs~~-~~~~~~~f~~----~~~fp~~~ll~D~ 165 (259)
|++|. .+|||+|..-..-|.+. ...|+ .++-|..+ +....+++.+ ...+|. |+.|.
T Consensus 16 Vvvys-k~~Cp~C~~ak~lL~~~----~~~~v~~~~idid~~~d~~~~~~~l~~~~G~~tVP~--IfI~G 78 (127)
T 3l4n_A 16 IIIFS-KSTCSYSKGMKELLENE----YQFIPNYYIIELDKHGHGEELQEYIKLVTGRGTVPN--LLVNG 78 (127)
T ss_dssp EEEEE-CTTCHHHHHHHHHHHHH----EEEESCCEEEEGGGSTTHHHHHHHHHHHHSCCSSCE--EEETT
T ss_pred EEEEE-cCCCccHHHHHHHHHHh----cccCCCcEEEEecCCCCHHHHHHHHHHHcCCCCcce--EEECC
Confidence 44443 69999999877766652 11233 34444433 2234444443 356774 66664
No 306
>3dex_A SAV_2001; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Streptomyces avermitilis} SCOP: c.47.1.0
Probab=62.94 E-value=3.5 Score=30.32 Aligned_cols=35 Identities=17% Similarity=0.380 Sum_probs=30.0
Q ss_pred ccCeEEEEe-CCeEEEEEecCCCCCCCCHHHHHHHhccC
Q 024977 219 QQGGMFVFK-GKQLLYARKDEGTGDHASLDDVFDICCKV 256 (259)
Q Consensus 219 ~~gg~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~~~~ 256 (259)
..+|+|.|. +|+++|.-. -+..|+.++|.+.++..
T Consensus 52 g~gG~FeV~vdg~lVwsRk---~gGFPd~keLkq~VRd~ 87 (107)
T 3dex_A 52 GTGGVFVVRVDDEVVWDRR---EQGFPEPTAVKRLVRDR 87 (107)
T ss_dssp ESSSCEEEEETTEEEEEHH---HHCSCCHHHHHHHHHHT
T ss_pred CCCceEEEEECCEEEEEec---CCCCCCHHHHHHHHHHH
Confidence 358999998 999999987 47799999999988764
No 307
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=55.56 E-value=21 Score=28.85 Aligned_cols=42 Identities=17% Similarity=0.175 Sum_probs=31.6
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCC
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGT 143 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~ 143 (259)
+.++++|-..||..|...++.+++...+++.. +.++.|..+.
T Consensus 132 ~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~~-i~F~~vd~~~ 173 (227)
T 4f9z_D 132 QIHLLLIMNKASPEYEENMHRYQKAAKLFQGK-ILFILVDSGM 173 (227)
T ss_dssp CEEEEEEECTTSTTHHHHHHHHHHHHHHTTTT-CEEEEEETTS
T ss_pred ceEEEEEEcCCcchHHHHHHHHHHHHHHhhCC-EEEEEeCCcc
Confidence 56666665789999999999999998888654 6666666543
No 308
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=54.63 E-value=26 Score=27.71 Aligned_cols=38 Identities=18% Similarity=0.325 Sum_probs=25.5
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEE
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAV 139 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~V 139 (259)
++.|.+|--.-||+|....+.+.++.. +...++++.-+
T Consensus 7 ~~~I~~f~D~~CP~C~~~~~~~~~l~~-~~~~~v~v~~~ 44 (216)
T 2in3_A 7 KPVLWYIADPMCSWCWGFAPVIENIRQ-EYSAFLTVKIM 44 (216)
T ss_dssp CCEEEEEECTTCHHHHHHHHHHHHHHH-HHTTTCEEEEE
T ss_pred ceeEEEEECCCCchhhcchHHHHHHHh-cCCCCeEEEEe
Confidence 445556668899999977666666655 43446776654
No 309
>2p0g_A Selenoprotein W-related protein; VCR75, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Vibrio cholerae}
Probab=50.92 E-value=8.9 Score=28.01 Aligned_cols=36 Identities=19% Similarity=0.291 Sum_probs=29.6
Q ss_pred ccCeEEEEe-CCeEEEEEecCCCCCCCCHHHHHHHhccC
Q 024977 219 QQGGMFVFK-GKQLLYARKDEGTGDHASLDDVFDICCKV 256 (259)
Q Consensus 219 ~~gg~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~~~~ 256 (259)
..+|+|-|- +|+++|.-... +..|+.++|.+.++..
T Consensus 43 ~~~G~FEV~vng~lV~SKk~~--ggFPe~~eLkq~Vrd~ 79 (105)
T 2p0g_A 43 DTGGRFEIFCNGVQIWERKQE--GGFPEAKVLKQRVRDL 79 (105)
T ss_dssp ESTTCEEEEETTEEEEEHHHH--TSCCCHHHHHHHHHTT
T ss_pred CCCceEEEEECCEEEEEEecC--CCCCCHHHHHHHHHHH
Confidence 357999998 99999987744 6699999999888754
No 310
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=49.60 E-value=16 Score=32.04 Aligned_cols=44 Identities=9% Similarity=0.176 Sum_probs=34.9
Q ss_pred HHHHHHHHHHhhCCcEEEEEeCCChHHHHHHHhh----CCCCCCCccc
Q 024977 120 SALKESKARFDSAGVKLIAVGVGTPNKAQILAER----LPFPMDCLYA 163 (259)
Q Consensus 120 ~~L~~~~~~~~~~gv~vv~Vs~~~~~~~~~f~~~----~~fp~~~ll~ 163 (259)
+...++...+++.|++++.||....+.++.|.+. ++.|.++++.
T Consensus 146 ~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp~e~ViG 193 (327)
T 4as2_A 146 SGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKPENVIG 193 (327)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCCGGGEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCCHHHeEe
Confidence 5566777788899999999999999999999984 5666555443
No 311
>2ojl_A Hypothetical protein; BPR68, NESG, Q7WAF1, structural genomics, PSI-2, protein STR initiative, northeast structural genomics consortium; 2.10A {Bordetella parapertussis}
Probab=49.52 E-value=9 Score=28.16 Aligned_cols=35 Identities=17% Similarity=0.283 Sum_probs=28.8
Q ss_pred ccCeEEEEe-CCeEEEEEecCCCCCCCCHHHHHHHhcc
Q 024977 219 QQGGMFVFK-GKQLLYARKDEGTGDHASLDDVFDICCK 255 (259)
Q Consensus 219 ~~gg~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~~~ 255 (259)
..+|+|.|- +|+++|.-... +..|+.++|.+.++.
T Consensus 48 ~~~G~FeV~vng~lVwsRk~~--ggFPe~keLkq~Vrd 83 (108)
T 2ojl_A 48 GTGGVFRIHYNGAPLWDREVD--GGFPEAKVLKQRVRD 83 (108)
T ss_dssp ECTTCEEEEETTEEEEEHHHH--CSCCCHHHHHHHHHH
T ss_pred CCCceEEEEECCEEEEEEccC--CCCCCHHHHHHHHHH
Confidence 357999998 99999987744 668999999888765
No 312
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=48.75 E-value=23 Score=26.24 Aligned_cols=37 Identities=19% Similarity=0.314 Sum_probs=29.0
Q ss_pred HHHHHHHHHhhCCcEEEEEeCCChHHHHHHHhhCCCC
Q 024977 121 ALKESKARFDSAGVKLIAVGVGTPNKAQILAERLPFP 157 (259)
Q Consensus 121 ~L~~~~~~~~~~gv~vv~Vs~~~~~~~~~f~~~~~fp 157 (259)
.|.++.+.+.+.|+.+|+|...+.+..++.....++|
T Consensus 62 dl~~L~~~l~~~gl~~vGV~g~~~~~~~~~a~~~GLp 98 (120)
T 3ghf_A 62 NWPELHKIVTSTGLRIIGVSGCKDASLKVEIDRMGLP 98 (120)
T ss_dssp CHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHcCCEEEEEeCCCcHHHHHHHHHCCCC
Confidence 4666667788899999999887766667777777888
No 313
>2oka_A Hypothetical protein; PAR82, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.50A {Pseudomonas aeruginosa} PDB: 2obk_A
Probab=47.39 E-value=10 Score=27.68 Aligned_cols=35 Identities=17% Similarity=0.320 Sum_probs=28.8
Q ss_pred ccCeEEEEe-CCeEEEEEecCCCCCCCCHHHHHHHhcc
Q 024977 219 QQGGMFVFK-GKQLLYARKDEGTGDHASLDDVFDICCK 255 (259)
Q Consensus 219 ~~gg~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~~~ 255 (259)
..+|+|-|- +|+++|.-... +..|+.++|.+.++.
T Consensus 45 ~~~G~FEV~vng~lV~SKk~~--ggFPe~~eLkq~Vrd 80 (104)
T 2oka_A 45 GTGGVFRITCDGVQVWERKAD--GGFPEAKALKQRVRD 80 (104)
T ss_dssp ECTTCEEEEETTEEEEEHHHH--TSCCCHHHHHHHHHH
T ss_pred CCCceEEEEECCEEEEEEecC--CCCCCHHHHHHHHHH
Confidence 457999998 99999987744 669999999888764
No 314
>2npb_A Selenoprotein W; structure, thioredoxin-like fold, oxidoreductase; NMR {Mus musculus}
Probab=47.22 E-value=9.7 Score=27.30 Aligned_cols=35 Identities=17% Similarity=0.240 Sum_probs=27.5
Q ss_pred ccCeEEEEe-CCeEEEEEecCCCCCCCCHHHHHHHhcc
Q 024977 219 QQGGMFVFK-GKQLLYARKDEGTGDHASLDDVFDICCK 255 (259)
Q Consensus 219 ~~gg~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~~~ 255 (259)
..+|.|-|- +|+++|.-. ..+..|+.+++++.+++
T Consensus 43 ~~~G~FEV~vng~lV~SKk--~~ggFP~~~el~q~I~~ 78 (96)
T 2npb_A 43 QVTGFFEVTVAGKLVHSKK--RGDGYVDTESKFRKLVT 78 (96)
T ss_dssp SCCSCCEEEETTEEEEETT--TTCCSSCSHHHHHHHHH
T ss_pred CCCcEEEEEECCEEEEEEe--cCCCCCChHHHHHHHHH
Confidence 357999998 999999865 45778999988777654
No 315
>2fa8_A Hypothetical protein ATU0228; ALPH-beta structure, 4 helix bundle, structural genomics, PS protein structure initiative; 1.90A {Agrobacterium tumefaciens str} SCOP: c.47.1.23
Probab=45.27 E-value=11 Score=27.44 Aligned_cols=34 Identities=18% Similarity=0.429 Sum_probs=28.4
Q ss_pred cCeEEEEe-CCeEEEEEecCCCCCCCCHHHHHHHhcc
Q 024977 220 QGGMFVFK-GKQLLYARKDEGTGDHASLDDVFDICCK 255 (259)
Q Consensus 220 ~gg~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~~~ 255 (259)
.+|.|-|- +|+++|.-... +..|+.++|.+.++.
T Consensus 48 ~~G~FEV~vng~lV~SKk~~--ggFPe~~elkq~Vr~ 82 (105)
T 2fa8_A 48 TGGLFEITVDGTIIWERKRD--GGFPGPKELKQRIRD 82 (105)
T ss_dssp CTTCEEEEETTEEEEEHHHH--TSCCCHHHHHHHHHH
T ss_pred CCcEEEEEECCEEEEEeccC--CCCCCHHHHHHHHHH
Confidence 57999998 99999987644 669999999988764
No 316
>2r47_A Uncharacterized protein MTH_862; unknown function, structural genomics, APC5901, PSI-2; 1.88A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=42.98 E-value=14 Score=28.85 Aligned_cols=73 Identities=18% Similarity=0.080 Sum_probs=57.0
Q ss_pred EecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeCCChHHHHHHHhhCCCCCCCcccCCc
Q 024977 89 VLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTPNKAQILAERLPFPMDCLYADPD 166 (259)
Q Consensus 89 v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~~~~~~f~~~~~fp~~~ll~D~~ 166 (259)
+.+.+.... ++-+|+.+-+-.-|.+.-.....+++.+++-+.+-.+|+|...+.++-..|.+.++|. ++.|.+
T Consensus 75 ~~~~~~~~~--~~D~vVllGGLAMPk~~v~~e~v~~li~ki~~~~~kiiGvCFms~F~kagW~~~IdFD---~iID~~ 147 (157)
T 2r47_A 75 VELGEISPG--NVDVLVLLGGLSMPGIGSDIEDVKKLVEDALEEGGELMGLCYMDMFARAGWYELLDFD---CVINAD 147 (157)
T ss_dssp EEEEEECCC--CEEEEEEEGGGGSTTTSCCHHHHHHHHHHHEEEEEEEEEEEETTHHHHTTHHHHSCCS---EEEEEE
T ss_pred eEeccccCC--CCCEEEEeccccCCCCCCCHHHHHHHHHHhhcCCCCEEEEEhHHHHHHcCCCccCCcc---EEEEcc
Confidence 455555432 3778888888888888878888888887775456779999999999888999999999 777754
No 317
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=42.01 E-value=81 Score=24.84 Aligned_cols=57 Identities=11% Similarity=0.039 Sum_probs=33.1
Q ss_pred EEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeC
Q 024977 80 SIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGV 141 (259)
Q Consensus 80 ~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~ 141 (259)
.+.+.+|..+....+..+..++.+|+|+.+.++..- .+..+.+.+.+.|..++++..
T Consensus 21 ~~~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~-----~~~~~~~~l~~~g~~v~~~d~ 77 (303)
T 3pe6_A 21 HLVNADGQYLFCRYWAPTGTPKALIFVSHGAGEHSG-----RYEELARMLMGLDLLVFAHDH 77 (303)
T ss_dssp EEECTTSCEEEEEEECCSSCCSEEEEEECCTTCCGG-----GGHHHHHHHHHTTEEEEEECC
T ss_pred eEecCCCeEEEEEEeccCCCCCeEEEEECCCCchhh-----HHHHHHHHHHhCCCcEEEeCC
Confidence 567778877776555432113456666666554322 223344556667999998854
No 318
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=40.23 E-value=22 Score=30.40 Aligned_cols=37 Identities=24% Similarity=0.365 Sum_probs=26.2
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEe
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVG 140 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs 140 (259)
++.|..|...+||+|..--.-|.+...+ .|+..+.+.
T Consensus 43 ~~~VelyTs~gCp~C~~Ak~lL~~~~~~---~~vi~l~~~ 79 (270)
T 2axo_A 43 KGVVELFTSQGCASCPPADEALRKMIQK---GDVVGLSYH 79 (270)
T ss_dssp CCEEEEEECTTCTTCHHHHHHHHHHHHH---TSSEEEEEE
T ss_pred CcEEEEEeCCCCCChHHHHHHHHHhhcc---CCeeeEEEE
Confidence 3777778899999999887777776543 455434444
No 319
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.17 E-value=58 Score=25.62 Aligned_cols=46 Identities=11% Similarity=-0.006 Sum_probs=32.1
Q ss_pred CcEEEEEEcCCCCHhhHHHHHHH---HHHHHHHhhCCcEEEEEeCCChHH
Q 024977 100 GVAVVALLRHFGCPCCWELASAL---KESKARFDSAGVKLIAVGVGTPNK 146 (259)
Q Consensus 100 ~~vvL~f~r~~~Cp~C~~~l~~L---~~~~~~~~~~gv~vv~Vs~~~~~~ 146 (259)
+|.+++++.+.||+.|......+ .+..+-+ +.+..+++...++.+.
T Consensus 55 ~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l-~~nfV~w~~dv~~~e~ 103 (178)
T 2ec4_A 55 RKLLAIYLHHDESVLTNVFCSQMLCAESIVSYL-SQNFITWAWDLTKDSN 103 (178)
T ss_dssp CCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHH-HHTEEEEEEECCSHHH
T ss_pred CcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHH-HcCEEEEEEeCCCchh
Confidence 58888899999999999877554 2222223 3477777887777663
No 320
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=38.35 E-value=62 Score=25.45 Aligned_cols=37 Identities=14% Similarity=0.341 Sum_probs=27.9
Q ss_pred EEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEe
Q 024977 103 VVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVG 140 (259)
Q Consensus 103 vL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs 140 (259)
-|.+|.-.-||.|....+.|.++..++. .+++|.-..
T Consensus 4 ~I~~~~D~~CP~cy~~~~~l~~l~~~~~-~~v~v~~~p 40 (208)
T 3kzq_A 4 KLYYVHDPMCSWCWGYKPTIEKLKQQLP-GVIQFEYVV 40 (208)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHSC-TTSEEEEEE
T ss_pred EEEEEECCCCchhhhhhHHHHHHHHhCC-CCceEEEEe
Confidence 3455558999999999999999888774 467766543
No 321
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=37.36 E-value=34 Score=32.00 Aligned_cols=21 Identities=29% Similarity=0.627 Sum_probs=14.0
Q ss_pred EEEEEcCCCCHhhHHHHHHHHH
Q 024977 103 VVALLRHFGCPCCWELASALKE 124 (259)
Q Consensus 103 vL~f~r~~~Cp~C~~~l~~L~~ 124 (259)
|++|. ..|||+|..--..|.+
T Consensus 20 v~vy~-~~~Cp~C~~~k~~L~~ 40 (598)
T 2x8g_A 20 VILFS-KTTCPYCKKVKDVLAE 40 (598)
T ss_dssp EEEEE-CTTCHHHHHHHHHHHH
T ss_pred EEEEE-CCCChhHHHHHHHHHH
Confidence 44444 6799999976655553
No 322
>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens}
Probab=35.57 E-value=1.3e+02 Score=24.65 Aligned_cols=61 Identities=11% Similarity=0.068 Sum_probs=34.9
Q ss_pred CCCc-EEecCCCCeEecccccccCCCcEEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEEeC
Q 024977 76 LGDF-SIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGV 141 (259)
Q Consensus 76 aPdf-~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~Vs~ 141 (259)
..++ .+.+.+|..+....+......+.+|+|+.+.++..- .+..+.+.+.+.|..++++..
T Consensus 34 ~~~~~~~~~~dg~~l~~~~~~p~~~~~p~vv~~HG~~~~~~-----~~~~~~~~l~~~g~~vi~~D~ 95 (342)
T 3hju_A 34 YQDLPHLVNADGQYLFCRYWKPTGTPKALIFVSHGAGEHSG-----RYEELARMLMGLDLLVFAHDH 95 (342)
T ss_dssp TTSSCEEECTTSCEEEEEEECCSSCCSEEEEEECCTTCCGG-----GGHHHHHHHHTTTEEEEEECC
T ss_pred cccCceEEccCCeEEEEEEeCCCCCCCcEEEEECCCCcccc-----hHHHHHHHHHhCCCeEEEEcC
Confidence 4445 667778877776555322112445566656554322 233445556677999998853
No 323
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=30.91 E-value=28 Score=26.73 Aligned_cols=39 Identities=15% Similarity=0.102 Sum_probs=28.1
Q ss_pred cEEecCCCCeEecccccccCCCcEEEEEEcC-CCCHhhHHHHHHHHHHHHH
Q 024977 79 FSIFTAAGEPVLFKDLWDQNEGVAVVALLRH-FGCPCCWELASALKESKAR 128 (259)
Q Consensus 79 f~l~d~~G~~v~lsdl~~~~~~~vvL~f~r~-~~Cp~C~~~l~~L~~~~~~ 128 (259)
+++.|..|+.+-+ +++- -|. .|||.|..++.++++.+.+
T Consensus 25 v~l~d~~Gk~vll-~F~~----------t~Cp~~Cp~~~~~l~~l~~~~~~ 64 (170)
T 4hde_A 25 FGTKDLKGKVWVA-DFMF----------TNCQTVCPPMTANMAKLQKMAKE 64 (170)
T ss_dssp EEHHHHTTSCEEE-EEEC----------TTCSSSHHHHHHHHHHHHHHHHH
T ss_pred EeHHHhCCCEEEE-EEEC----------CCCCCcccHHHHHHHHHHHhhhc
Confidence 6777778885544 3433 355 5999999999999887643
No 324
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=30.76 E-value=91 Score=24.23 Aligned_cols=39 Identities=10% Similarity=-0.058 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHhhCCcEEEEEeCCChHHHHHHHhhCCCC
Q 024977 119 ASALKESKARFDSAGVKLIAVGVGTPNKAQILAERLPFP 157 (259)
Q Consensus 119 l~~L~~~~~~~~~~gv~vv~Vs~~~~~~~~~f~~~~~fp 157 (259)
.+...+....+++.|+.++.++.+....++.+.+.+++.
T Consensus 94 ~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~ 132 (232)
T 3fvv_A 94 TVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQ 132 (232)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 456667777788899999999988888888888877775
No 325
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=30.76 E-value=21 Score=27.09 Aligned_cols=35 Identities=6% Similarity=-0.053 Sum_probs=24.8
Q ss_pred ccccCeEEEEe-CCeEEEEEecCCCCCCCCHHHHHHHhcc
Q 024977 217 VLQQGGMFVFK-GKQLLYARKDEGTGDHASLDDVFDICCK 255 (259)
Q Consensus 217 ~~~~gg~fVid-~g~V~y~~~~~~~~d~~~~~~iL~a~~~ 255 (259)
....|.++++| +|++++.+. |...+.+++++.+.+
T Consensus 128 v~~~Pt~~lid~~G~~~~~~~----G~~~~~~~l~~~l~~ 163 (172)
T 3f9u_A 128 ANAQPFYVLIDNEGNPLNKSY----AYDEDISKYINFLQT 163 (172)
T ss_dssp CCCSSEEEEECTTSCBSSCCB----CSCCCHHHHHHHHHH
T ss_pred CCCcceEEEECCCCCEEeecc----CCCCCHHHHHHHHHH
Confidence 45588999998 899888766 444447777666543
No 326
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=30.59 E-value=71 Score=25.01 Aligned_cols=33 Identities=15% Similarity=0.236 Sum_probs=25.5
Q ss_pred EEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEE
Q 024977 104 VALLRHFGCPCCWELASALKESKARFDSAGVKLIAV 139 (259)
Q Consensus 104 L~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~V 139 (259)
|.+|.-.-||+|..-.+.|.++..++ +++|.-.
T Consensus 3 I~~~~D~~CP~cy~~~~~l~~~~~~~---~~~v~~~ 35 (203)
T 2imf_A 3 VDFYFDFLSPFSYLANQRLSKLAQDY---GLTIRYN 35 (203)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHHH---CCEEEEE
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHHHc---CCeEEEE
Confidence 45555889999999999999988776 4665543
No 327
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=29.66 E-value=93 Score=22.91 Aligned_cols=35 Identities=9% Similarity=0.026 Sum_probs=27.8
Q ss_pred HHHHHHHhhCCcEEEEEeCCChHHHHHHHhhCCCC
Q 024977 123 KESKARFDSAGVKLIAVGVGTPNKAQILAERLPFP 157 (259)
Q Consensus 123 ~~~~~~~~~~gv~vv~Vs~~~~~~~~~f~~~~~fp 157 (259)
.+...++++.|+.++.++......++.+.+.+++.
T Consensus 42 ~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 76 (162)
T 2p9j_A 42 GIGIKLLQKMGITLAVISGRDSAPLITRLKELGVE 76 (162)
T ss_dssp HHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCC
T ss_pred HHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCH
Confidence 35556677889999999988888888888877776
No 328
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=29.63 E-value=1.2e+02 Score=20.37 Aligned_cols=54 Identities=19% Similarity=0.191 Sum_probs=36.5
Q ss_pred HHHHHHHhhCCcEEEEEeCCChHHHH----HHHhhCCCCCCCcccCCchHHHHHhCCccc
Q 024977 123 KESKARFDSAGVKLIAVGVGTPNKAQ----ILAERLPFPMDCLYADPDRKVYNLLGLYHG 178 (259)
Q Consensus 123 ~~~~~~~~~~gv~vv~Vs~~~~~~~~----~f~~~~~fp~~~ll~D~~~~~~~~~Gv~~~ 178 (259)
++....++...+++|.|..|-..... .+++..+.|+ ++.+...++.++.|..+.
T Consensus 17 ~~v~kai~~gkaklViiA~D~~~~~~~~i~~lc~~~~Ip~--~~v~sk~eLG~a~Gk~~~ 74 (82)
T 3v7e_A 17 KQTVKALKRGSVKEVVVAKDADPILTSSVVSLAEDQGISV--SMVESMKKLGKACGIEVG 74 (82)
T ss_dssp HHHHHHHTTTCEEEEEEETTSCHHHHHHHHHHHHHHTCCE--EEESCHHHHHHHHTCSSC
T ss_pred HHHHHHHHcCCeeEEEEeCCCCHHHHHHHHHHHHHcCCCE--EEECCHHHHHHHhCCCCC
Confidence 34455666777899999888644433 3344567775 566677888999888654
No 329
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=29.55 E-value=49 Score=29.46 Aligned_cols=38 Identities=8% Similarity=0.081 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHhhCCcEEEEEeCCChHHHHHHHhhCCC
Q 024977 119 ASALKESKARFDSAGVKLIAVGVGTPNKAQILAERLPF 156 (259)
Q Consensus 119 l~~L~~~~~~~~~~gv~vv~Vs~~~~~~~~~f~~~~~f 156 (259)
.|...++...+++.|+.++.||-+..+-++.+++.++|
T Consensus 223 ~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~ 260 (385)
T 4gxt_A 223 LDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNN 260 (385)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTS
T ss_pred CHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCc
Confidence 46667777788899999999999999999999997654
No 330
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=29.28 E-value=52 Score=23.13 Aligned_cols=35 Identities=9% Similarity=-0.025 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHhhCCcEEEEEeCCChHHHHHHHh
Q 024977 118 LASALKESKARFDSAGVKLIAVGVGTPNKAQILAE 152 (259)
Q Consensus 118 ~l~~L~~~~~~~~~~gv~vv~Vs~~~~~~~~~f~~ 152 (259)
-.+...+...++++.|+.++.++..+....+...+
T Consensus 19 ~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~ 53 (137)
T 2pr7_A 19 DQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIR 53 (137)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHH
T ss_pred cCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHH
Confidence 45667777788888999999999877655444444
No 331
>4ev1_A Anabena TIC22; TIC22 fold, chaperon, protein transport, TIC22-like family, thylakoids, chaperone; HET: NHE; 1.95A {Anabaena SP}
Probab=27.88 E-value=92 Score=26.20 Aligned_cols=65 Identities=15% Similarity=0.154 Sum_probs=39.3
Q ss_pred CCCCCcEEecCCCCeEecccccc--cC--CCcEEEEEEcCCCCHhhHHHHHHH----HH---HHH---HHhhCCcEEEEE
Q 024977 74 DLLGDFSIFTAAGEPVLFKDLWD--QN--EGVAVVALLRHFGCPCCWELASAL----KE---SKA---RFDSAGVKLIAV 139 (259)
Q Consensus 74 ~~aPdf~l~d~~G~~v~lsdl~~--~~--~~~vvL~f~r~~~Cp~C~~~l~~L----~~---~~~---~~~~~gv~vv~V 139 (259)
+.+|-|++.|.+|+++-.+.-.+ +. +..+.++|+ ++..+.++ +. .-+ ++ ..+++|+.|
T Consensus 12 ~~VPVF~Itn~~G~Pll~~~~~~~~~~~~~~~V~~~F~-------s~~dA~~~L~~lk~~~~~np~~~~~-~~~~kV~~v 83 (252)
T 4ev1_A 12 DSVPIYLVTNEKGLPLSRPLPNAPNGQKAGGSITGAYM-------SRQEAQAFINELRNAKNKDPKMQEI-VKSLQVTAV 83 (252)
T ss_dssp TTSEEEEEECTTCCBCEEECCCCTTSCCSCSEEEEEES-------CHHHHHHHHHHHHHCSSCCHHHHHH-HTTCEEEEE
T ss_pred cCCcEEEEECCCCCeEEEecCCccccccCCCeEEEEEe-------cHHHHHHHHHHHHhccccCchhhhh-ccCceEEEe
Confidence 45788999999999887775441 10 124555554 44444333 33 212 22 347899999
Q ss_pred eCCChHH
Q 024977 140 GVGTPNK 146 (259)
Q Consensus 140 s~~~~~~ 146 (259)
+.+....
T Consensus 84 sL~~vyq 90 (252)
T 4ev1_A 84 PLGVIYQ 90 (252)
T ss_dssp EHHHHHH
T ss_pred eHHHHHH
Confidence 9877654
No 332
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=26.75 E-value=68 Score=26.23 Aligned_cols=39 Identities=21% Similarity=0.465 Sum_probs=30.9
Q ss_pred cEEEEEEcCCCCHhhHHHHHHHHHHHHHHh-hCCcEEEEE
Q 024977 101 VAVVALLRHFGCPCCWELASALKESKARFD-SAGVKLIAV 139 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~-~~gv~vv~V 139 (259)
|+-|-||.-.-||.|..-.+.|.++..++. ..+++|.-.
T Consensus 2 ~~~I~~~~D~~cPwcyig~~~l~~a~~~~~~~~~v~v~~~ 41 (239)
T 3gl5_A 2 HMRVEIWSDIACPWCYVGKARFEKALAAFPHRDGVEVVHR 41 (239)
T ss_dssp CEEEEEEECSSCHHHHHHHHHHHHHHHTCTTGGGEEEEEE
T ss_pred CeEEEEEEeCcCHhHHHHHHHHHHHHHhcCccCceEEEEE
Confidence 567778889999999999999999887775 356766543
No 333
>3hug_B Probable conserved membrane protein; ECF sigma factor, zinc binding anti-sigma factor, oxidative transcription regulation; 2.35A {Mycobacterium tuberculosis}
Probab=25.51 E-value=37 Score=24.77 Aligned_cols=23 Identities=26% Similarity=0.442 Sum_probs=19.2
Q ss_pred CCCHhhHHHHHHHHHHHHHHhhC
Q 024977 110 FGCPCCWELASALKESKARFDSA 132 (259)
Q Consensus 110 ~~Cp~C~~~l~~L~~~~~~~~~~ 132 (259)
..|+-|+.++.+|++....+...
T Consensus 52 a~Cp~CR~ev~eL~~~~a~L~~l 74 (108)
T 3hug_B 52 AGCPECRGAVTELCGVPALLSQL 74 (108)
T ss_dssp HTCHHHHHHHHHHTTHHHHHTTS
T ss_pred HhCHHHHHHHHHHHHHHHHHhcC
Confidence 47999999999999888777543
No 334
>3ga8_A HTH-type transcriptional regulator MQSA (YGIT/B30; helix-turn-helix, Zn-binding protein, DNA-binding, transcrip transcription regulation; HET: PE4; 1.70A {Escherichia coli k-12} PDB: 3hi2_A
Probab=25.29 E-value=37 Score=22.80 Aligned_cols=30 Identities=20% Similarity=0.274 Sum_probs=21.0
Q ss_pred cEEEEEEcCCCCHhhH------HHHHHHHHHHHHHh
Q 024977 101 VAVVALLRHFGCPCCW------ELASALKESKARFD 130 (259)
Q Consensus 101 ~vvL~f~r~~~Cp~C~------~~l~~L~~~~~~~~ 130 (259)
.++|-.+++.+|+.|- .++..+.++..+|+
T Consensus 28 ~~~I~~Vp~~~C~~CGE~~~~~e~~~~~~~~~~~f~ 63 (78)
T 3ga8_A 28 KTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 63 (78)
T ss_dssp EEEEEEEEEEEETTTCCEECCHHHHHHHHHHHHHHH
T ss_pred EEEEcCceeEECCCCCCEEECHHHHHHHHHHHHHHH
Confidence 5666688999999994 45566666665554
No 335
>3umv_A Deoxyribodipyrimidine photo-lyase; CPD cyclobutane pyrimidine dimers, UV damaged DNA, DNA repai flavoprotein; HET: FAD; 1.71A {Oryza sativa japonica group}
Probab=24.92 E-value=2.5e+02 Score=25.92 Aligned_cols=62 Identities=19% Similarity=0.051 Sum_probs=42.0
Q ss_pred cEEEEEEcCCC--C----Hh-hHHHHHHHHHHHHHHhhCCcEEEEEeCCChHHHHHHHhhCCCCCCCcccCC
Q 024977 101 VAVVALLRHFG--C----PC-CWELASALKESKARFDSAGVKLIAVGVGTPNKAQILAERLPFPMDCLYADP 165 (259)
Q Consensus 101 ~vvL~f~r~~~--C----p~-C~~~l~~L~~~~~~~~~~gv~vv~Vs~~~~~~~~~f~~~~~fp~~~ll~D~ 165 (259)
+++.+|+.-.. - +. ..-.+..|+++..++++.|..++.+..+..+. .++++.++... |++|.
T Consensus 69 pVl~vfildp~~~~~~~~~~r~~FL~~sL~dL~~~L~~lG~~L~v~~G~p~~v-~~L~~~~~a~~--V~~d~ 137 (506)
T 3umv_A 69 PLAVAFALFPRPFLLSARRRQLGFLLRGLRRLAADAAARHLPFFLFTGGPAEI-PALVQRLGAST--LVADF 137 (506)
T ss_dssp CEEEEEECCCTTCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCTTHH-HHHHHHTTCSE--EEECC
T ss_pred CEEEEEeccchhhccCCCHHHHHHHHHHHHHHHHHHHHcCCceEEEecChHHH-HHHHHhcCCCE--EEecc
Confidence 77777775433 1 11 12246778888889999999999987666666 88888665543 55554
No 336
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=24.86 E-value=4.4 Score=22.33 Aligned_cols=20 Identities=20% Similarity=0.348 Sum_probs=15.8
Q ss_pred CCHhhHHHHHHHHHHHHHHh
Q 024977 111 GCPCCWELASALKESKARFD 130 (259)
Q Consensus 111 ~Cp~C~~~l~~L~~~~~~~~ 130 (259)
-||.|..++|.++.+..-|+
T Consensus 5 ~CpvCk~q~Pd~kt~~~H~e 24 (28)
T 2jvx_A 5 CCPKCQYQAPDMDTLQIHVM 24 (28)
T ss_dssp ECTTSSCEESSHHHHHHHHH
T ss_pred cCccccccCcChHHHHHHHH
Confidence 59999999998887765554
No 337
>1xcr_A Hypothetical protein PTD012; structural genomics, zinc-containing fold, splice variant, A buffer, metal binding protein; 1.70A {Homo sapiens} SCOP: d.290.1.2
Probab=24.52 E-value=44 Score=29.04 Aligned_cols=27 Identities=15% Similarity=0.065 Sum_probs=21.5
Q ss_pred cccc-CeEEEEeCCeEEEEEecCCCCCCC
Q 024977 217 VLQQ-GGMFVFKGKQLLYARKDEGTGDHA 244 (259)
Q Consensus 217 ~~~~-gg~fVid~g~V~y~~~~~~~~d~~ 244 (259)
..-+ ||+|+|..|++.+ |+++++..-|
T Consensus 201 ~VgL~GGvFlik~Gkak~-HVMpdFs~~P 228 (316)
T 1xcr_A 201 PIGMGGTFIIQKGKVKSH-IMPAEFSSCP 228 (316)
T ss_dssp CCEEEEEEEEEESEEEEE-ECCSSCCSSC
T ss_pred eeeecceEEEEecCcEEE-EeCCCCCCCC
Confidence 5668 9999999998875 7888776644
No 338
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=23.22 E-value=66 Score=25.76 Aligned_cols=35 Identities=20% Similarity=0.166 Sum_probs=25.5
Q ss_pred EEEEEEcCCCCHhhHHHHHHHHHHHHHHhhCCcEEEEE
Q 024977 102 AVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAV 139 (259)
Q Consensus 102 vvL~f~r~~~Cp~C~~~l~~L~~~~~~~~~~gv~vv~V 139 (259)
+.|.+|--.-||+|..-.+.|.++..+ .+++|.-.
T Consensus 6 ~~I~~~~D~~CP~Cy~~~~~l~~l~~~---~~~~v~~~ 40 (226)
T 1r4w_A 6 RVLELFYDVLSPYSWLGFEVLCRYQHL---WNIKLKLR 40 (226)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHTTT---SSEEEEEE
T ss_pred ceEEEEEeCCChHHHHHHHHHHHHHHH---cCCeEEEE
Confidence 445566689999999999999886543 36666544
No 339
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=22.42 E-value=54 Score=26.14 Aligned_cols=21 Identities=24% Similarity=0.243 Sum_probs=17.7
Q ss_pred CCCHhhHHHHHHHHHHHHHHh
Q 024977 110 FGCPCCWELASALKESKARFD 130 (259)
Q Consensus 110 ~~Cp~C~~~l~~L~~~~~~~~ 130 (259)
..|+.|+.++.+|++....+-
T Consensus 33 ~~C~~Cr~~v~~l~~~~~~l~ 53 (195)
T 2q1z_B 33 SLCDECRARAGALDAVGGSLM 53 (195)
T ss_dssp HHCHHHHHHHHHHHHHHHHHH
T ss_pred hHCHHHHHHHHHHHHHHHHHh
Confidence 369999999999999886654
Done!