Your job contains 1 sequence.
>024989
MVEPEMVKVLGRSAFHDTALTSSGDLSYLGGEWRREVAFAGFEVPIQMDVSAEKMIFGVA
GIDPQRRAELIKVLDIDLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLAR
ADLLRFLRKECEERGATIIYATHIFDGLENWPSHIVYVAHGKLQLAMPMDKVKEASKLSL
MRTVESWLRKERDEERKRRRERKASGLPEFDKQIHGSRVTGDPAQAAVRVMNNGWAAGRL
HSTVAGEENFVLSTNRVLR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 024989
(259 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2167644 - symbol:ABCI21 "ATP-binding cassette ... 563 1.6e-54 1
TAIR|locus:505006098 - symbol:ABCI19 "ATP-binding cassett... 548 6.3e-53 1
POMBASE|SPAC20G4.01 - symbol:caf16 "CCR4-Not complex subu... 334 3.0e-30 1
ASPGD|ASPL0000006229 - symbol:AN6512 species:162425 "Emer... 307 2.2e-27 1
UNIPROTKB|G4N1E4 - symbol:MGG_09520 "CCR4-Not complex sub... 290 1.4e-25 1
SGD|S000001866 - symbol:CAF16 "Component of the CCR4-NOT ... 277 3.3e-24 1
CGD|CAL0004927 - symbol:CAF16 species:5476 "Candida albic... 267 3.8e-23 1
UNIPROTKB|Q59QD0 - symbol:CAF16 "Potential CCR4-NOT compl... 267 3.8e-23 1
GENEDB_PFALCIPARUM|PF14_0321 - symbol:PF14_0321 "ABC tran... 186 1.4e-14 1
TIGR_CMR|BA_3653 - symbol:BA_3653 "ABC transporter, ATP-b... 129 3.1e-06 1
TIGR_CMR|SPO_1511 - symbol:SPO_1511 "efflux ABC transport... 115 9.0e-05 1
UNIPROTKB|O86311 - symbol:Rv1218c "Antibiotic transporter... 116 0.00012 1
UNIPROTKB|P34358 - symbol:ced-7 "ABC transporter ced-7" s... 122 0.00025 1
WB|WBGene00000421 - symbol:ced-7 species:6239 "Caenorhabd... 122 0.00026 1
TIGR_CMR|CHY_0900 - symbol:CHY_0900 "daunorubicin resista... 113 0.00029 1
UNIPROTKB|Q8EKL9 - symbol:SO_0073 "ABC-type efflux system... 110 0.00052 1
TIGR_CMR|SO_0073 - symbol:SO_0073 "ABC transporter, ATP-b... 110 0.00052 1
>TAIR|locus:2167644 [details] [associations]
symbol:ABCI21 "ATP-binding cassette A21" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005215 "transporter activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0010114 "response to red light" evidence=IEP] [GO:0010218
"response to far red light" evidence=IEP] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0009813 "flavonoid biosynthetic process"
evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR003439 InterPro:IPR003593 PROSITE:PS00211
PROSITE:PS50893 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006200 GO:GO:0016887
GO:GO:0005215 GO:GO:0010218 eggNOG:COG4586 HOGENOM:HOG000200636
KO:K12608 ProtClustDB:CLSN2916520 EMBL:AF127664 EMBL:AB005239
EMBL:BT006201 EMBL:AY087299 EMBL:AK228176 IPI:IPI00542640
RefSeq:NP_199224.1 UniGene:At.8709 ProteinModelPortal:Q9XF19
SMR:Q9XF19 IntAct:Q9XF19 PaxDb:Q9XF19 PRIDE:Q9XF19
EnsemblPlants:AT5G44110.1 GeneID:834434 KEGG:ath:AT5G44110
TAIR:At5g44110 InParanoid:Q9XF19 OMA:LETWASH PhylomeDB:Q9XF19
Genevestigator:Q9XF19 GO:GO:0010114 Uniprot:Q9XF19
Length = 282
Score = 563 (203.2 bits), Expect = 1.6e-54, P = 1.6e-54
Identities = 109/184 (59%), Positives = 135/184 (73%)
Query: 6 MVKVLGRSAFHDTALTSSGDLSYLGGEWRREVAFAGFEVPIQMDVSAEKMIFGVAGIDPQ 65
+V+VL RSAFHDT L SGDLSYLGG W + AG ++P+Q D SAE MIFGV GIDP
Sbjct: 70 VVQVLDRSAFHDTELVCSGDLSYLGGSWSKTAGSAG-DIPLQGDFSAEHMIFGVEGIDPF 128
Query: 66 RRAELIKVLDIDLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEITXXXXXXXXXXXXX 125
RR +LI +LDI+L WRMHKVSDGQRRRVQICMGLL PFKVLLLDE+T
Sbjct: 129 RREKLIDLLDINLQWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEVTVDLDVVARMDLLE 188
Query: 126 XXXKECEERGATIIYATHIFDGLENWPSHIVYVAHGKLQLAMPMDKVKEA-SKLSLMRTV 184
+ECE+RGATI+YATHIFDGLE W SH+ Y+ G+L+L+ +D++K+ + +L+ V
Sbjct: 189 FFKEECEQRGATIVYATHIFDGLETWASHLAYINGGELKLSAKLDEIKDLKTSPNLLSVV 248
Query: 185 ESWL 188
E+WL
Sbjct: 249 EAWL 252
>TAIR|locus:505006098 [details] [associations]
symbol:ABCI19 "ATP-binding cassette I19" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003439 InterPro:IPR003593 Pfam:PF00005
PROSITE:PS00211 PROSITE:PS50893 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005737 EMBL:AC003027
GO:GO:0006810 GO:GO:0006200 GO:GO:0016887 IPI:IPI00527766
PIR:G86169 RefSeq:NP_563694.1 UniGene:At.49849
ProteinModelPortal:Q3EDJ0 SMR:Q3EDJ0 PaxDb:Q3EDJ0 PRIDE:Q3EDJ0
EnsemblPlants:AT1G03905.1 GeneID:839376 KEGG:ath:AT1G03905
TAIR:At1g03905 eggNOG:COG4586 HOGENOM:HOG000200636
InParanoid:Q3EDJ0 KO:K12608 OMA:WATDFAY PhylomeDB:Q3EDJ0
ProtClustDB:CLSN2916520 Genevestigator:Q3EDJ0 GermOnline:AT1G03905
Uniprot:Q3EDJ0
Length = 290
Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
Identities = 108/184 (58%), Positives = 130/184 (70%)
Query: 6 MVKVLGRSAFHDTALTSSGDLSYLGGEWRREVAFAGFEVPIQMDVSAEKMIFGVAGIDPQ 65
+V+VL RSAFHDT L SGDLSYLGG W + V AG EVP+Q D SAE MIFGV G DP
Sbjct: 71 VVQVLSRSAFHDTQLVCSGDLSYLGGSWSKTVGSAG-EVPLQGDFSAEHMIFGVEGTDPV 129
Query: 66 RRAELIKVLDIDLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEITXXXXXXXXXXXXX 125
RR +LI +LDI+L WRMHKVSDGQ+RRVQICMGLL PFKVLLLDE+T
Sbjct: 130 RREKLIDLLDINLQWRMHKVSDGQKRRVQICMGLLHPFKVLLLDEVTVDLDVVARMDLLE 189
Query: 126 XXXKECEERGATIIYATHIFDGLENWPSHIVYVAHGKLQLAMPMDKVKEA-SKLSLMRTV 184
+EC++RGATI+YATHIFDGLE W +H+ Y+ G+L M ++E + +L+ V
Sbjct: 190 FFKEECDQRGATIVYATHIFDGLETWATHLAYIQDGELNRLSKMTDIEELKTSPNLLSVV 249
Query: 185 ESWL 188
ESWL
Sbjct: 250 ESWL 253
>POMBASE|SPAC20G4.01 [details] [associations]
symbol:caf16 "CCR4-Not complex subunit Caf16
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006354 "DNA-dependent
transcription, elongation" evidence=IC] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IC] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IC] [GO:0006402 "mRNA catabolic
process" evidence=IC] [GO:0006810 "transport" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0030014 "CCR4-NOT
complex" evidence=ISO] [GO:0030015 "CCR4-NOT core complex"
evidence=NAS] InterPro:IPR003439 InterPro:IPR003593 Pfam:PF00005
PROSITE:PS00211 PROSITE:PS50893 SMART:SM00382 PomBase:SPAC20G4.01
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 EMBL:CU329670
GO:GO:0006355 GO:GO:0006810 GO:GO:0016887 eggNOG:COG4586
HOGENOM:HOG000200636 KO:K12608 GO:GO:0006368 GO:GO:0006402
GO:GO:0006367 OrthoDB:EOG42NN8P GO:GO:0030015 RefSeq:XP_001713112.1
ProteinModelPortal:Q7Z991 STRING:Q7Z991 EnsemblFungi:SPAC20G4.01.1
GeneID:2541846 KEGG:spo:SPAC20G4.01 OMA:TILYATH NextBio:20802934
Uniprot:Q7Z991
Length = 280
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 78/189 (41%), Positives = 103/189 (54%)
Query: 7 VKVLGRSAFHDTALTSSGDLSYLGGEWRREVAFAGFEVPIQMDVSAEKMIFGVAGID-PQ 65
+ V G+ F + SS YLG EW I D+S ++I V G +
Sbjct: 61 ISVGGKDPFRE----SSSAFVYLGTEWVNNPV-------IHRDMSVARLIASVGGDKFAE 109
Query: 66 RRAELIKVLDIDLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEITXXXXXXXXXXXXX 125
RR LI +LDIDL WRMH VSDG+RRRVQ+CMGLL+PF+VLLLDE+T
Sbjct: 110 RRDFLISILDIDLRWRMHAVSDGERRRVQLCMGLLRPFEVLLLDEVTVDLDVLARADLLN 169
Query: 126 XXXKECEERGATIIYATHIFDGLENWPSHIVYVAHGKLQLAMPMDKV------KEASKLS 179
+E E R ATI+YATHIFDGL WP+H+V+++ G++ P+ K +
Sbjct: 170 FLQEETEVRNATIVYATHIFDGLAEWPTHLVHLSLGRIVDYGPISKFGALMTRSSTGNSA 229
Query: 180 LMRTVESWL 188
L+ T WL
Sbjct: 230 LLETCLEWL 238
>ASPGD|ASPL0000006229 [details] [associations]
symbol:AN6512 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003439 InterPro:IPR003593 Pfam:PF00005 PROSITE:PS50893
SMART:SM00382 GO:GO:0005524 GO:GO:0006200 GO:GO:0006357
GO:GO:0016887 HOGENOM:HOG000200636 EMBL:BN001301
ProteinModelPortal:C8V0J3 EnsemblFungi:CADANIAT00007283 OMA:QLAMGLI
Uniprot:C8V0J3
Length = 274
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 64/150 (42%), Positives = 91/150 (60%)
Query: 26 LSYLGGEWRREVAFAGFEVPIQMDVSAEKMIFGVAG-IDPQRRAELIKVLDIDLSWRMHK 84
++YLG EW ++ D+ ++ V G P+RR EL+++LDIDL WRMH
Sbjct: 79 VTYLGVEWVLNSI-------VRTDIDVPTLLASVGGNAYPERRDELVEILDIDLRWRMHA 131
Query: 85 VSDGQRRRVQICMGLLKPFKVLLLDEITXXXXXXXXXXXXXXXXKECEERGATIIYATHI 144
VSDG+RRRVQ+ MGLL+P++VLLLDEIT +E E R TI+YATHI
Sbjct: 132 VSDGERRRVQLAMGLLRPWQVLLLDEITVDLDLLSRSNFLSFLKRETETRPCTIVYATHI 191
Query: 145 FDGLENWPSHIVYVAHGKLQLAMPMDKVKE 174
D L +WP+H+V++ G ++ ++K KE
Sbjct: 192 LDNLAHWPTHLVHMHLGNVRQWGAIEKFKE 221
>UNIPROTKB|G4N1E4 [details] [associations]
symbol:MGG_09520 "CCR4-Not complex subunit Caf16"
species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003439
InterPro:IPR003593 PROSITE:PS50893 SMART:SM00382 GO:GO:0005524
EMBL:CM001233 GO:GO:0006200 GO:GO:0006357 GO:GO:0016887 KO:K12608
GO:GO:0030014 RefSeq:XP_003712222.1 ProteinModelPortal:G4N1E4
EnsemblFungi:MGG_09520T0 GeneID:2680528 KEGG:mgr:MGG_09520
Uniprot:G4N1E4
Length = 290
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 64/155 (41%), Positives = 89/155 (57%)
Query: 26 LSYLGGEWRREVAFAGFEVPIQMDVSAEKMIFGVAG-IDPQRRAELIKVLDIDLSWRMHK 84
++YLG EW ++ D+ +++ V G P RR EL++VLDID +WRMH
Sbjct: 85 VTYLGLEWVLNPI-------VRTDIGVAELLRSVGGDAYPARRDELVEVLDIDTAWRMHA 137
Query: 85 VSDGQRRRVQICMGLLKPFKVLLLDEITXXXXXXXXXXXXXXXXKECEERGATIIYATHI 144
VSDG+RRRVQ+ MGL++P+ VLLLDEIT +E E R AT++YATHI
Sbjct: 138 VSDGERRRVQLAMGLVRPWTVLLLDEITVDLDVLSRSGFLDWLKRETESRDATVVYATHI 197
Query: 145 FDGLENWPSHIVYVAHGKLQLAMPMDKVKEASKLS 179
D L WP+H+V++ G ++ P EA S
Sbjct: 198 LDNLHAWPTHLVHMHLGTVKEWGPAADFLEAQGAS 232
>SGD|S000001866 [details] [associations]
symbol:CAF16 "Component of the CCR4-NOT transcriptional
complex" species:4932 "Saccharomyces cerevisiae" [GO:0006200 "ATP
catabolic process" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0030014 "CCR4-NOT complex" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP;IPI] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003439 InterPro:IPR003593 Pfam:PF00005
PROSITE:PS00211 PROSITE:PS50893 SMART:SM00382 SGD:S000001866
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:D50617 EMBL:BK006940
GO:GO:0006357 GO:GO:0016887 eggNOG:COG4586 HOGENOM:HOG000200636
KO:K12608 GO:GO:0030014 PIR:S56226 RefSeq:NP_116625.1
ProteinModelPortal:P43569 SMR:P43569 DIP:DIP-5946N IntAct:P43569
STRING:P43569 PaxDb:P43569 PeptideAtlas:P43569 EnsemblFungi:YFL028C
GeneID:850516 KEGG:sce:YFL028C CYGD:YFL028c OMA:CHMSIIN
OrthoDB:EOG42NN8P NextBio:966239 Genevestigator:P43569
GermOnline:YFL028C Uniprot:P43569
Length = 289
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 61/154 (39%), Positives = 90/154 (58%)
Query: 27 SYLGGEWRREVAFAGFEVPIQMDVSAEKMIFGVAGIDPQR-RAE-LIKVLDIDLSWRMHK 84
+YLG EW + I D+ +++ + G D R R E L+++LDID+ WRMH+
Sbjct: 97 TYLGTEW------CHMSI-INRDIGVLELLKSI-GFDHFRERGERLVRILDIDVRWRMHR 148
Query: 85 VSDGQRRRVQICMGLLKPFKVLLLDEITXXXXXXXXXXXXXXXXKECEERGATIIYATHI 144
+SDGQ+RRVQ+ MGLLKP++VLLLDE+T E E R +++YATHI
Sbjct: 149 LSDGQKRRVQLAMGLLKPWRVLLLDEVTVDLDVIARARLLEFLKWETETRRCSVVYATHI 208
Query: 145 FDGLENWPSHIVYVAHGKLQLAMPMDKVKEASKL 178
FDGL WP+ + ++ GK+ + K E S++
Sbjct: 209 FDGLAKWPNQVYHMKSGKIVDNLDYQKDVEFSEV 242
>CGD|CAL0004927 [details] [associations]
symbol:CAF16 species:5476 "Candida albicans" [GO:0005524 "ATP
binding" evidence=ISS] [GO:0030014 "CCR4-NOT complex" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR003439
InterPro:IPR003593 Pfam:PF00005 PROSITE:PS50893 SMART:SM00382
CGD:CAL0004927 GO:GO:0005524 GO:GO:0006200 GO:GO:0016887
eggNOG:COG4586 HOGENOM:HOG000200636 KO:K12608 EMBL:AACQ01000177
EMBL:AACQ01000176 RefSeq:XP_711876.1 RefSeq:XP_711905.1
ProteinModelPortal:Q59QD0 STRING:Q59QD0 GeneID:3646477
GeneID:3646486 KEGG:cal:CaO19.388 KEGG:cal:CaO19.8018
Uniprot:Q59QD0
Length = 320
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 59/149 (39%), Positives = 84/149 (56%)
Query: 16 HDTALTSSGD-LSYLGGEWRREVAFAGFEVPIQMDVSAEKMIFGVAGIDPQ-RRAELIKV 73
H+ A + + ++YLG EW I+ D+ ++ + G Q RR LI +
Sbjct: 85 HEQANSDINNYITYLGTEWATNSI-------IKRDIPVNLLLASIGGETYQDRRNLLIDI 137
Query: 74 LDIDLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEITXXXXXXXXXXXXXXXXKECEE 133
LDID SW M +SDG+RRRVQI MGL+KP+K+LLLDE+T +EC+E
Sbjct: 138 LDIDPSWSMLNISDGERRRVQIAMGLVKPWKLLLLDEVTIDLDVVVRSKLLNYLKQECQE 197
Query: 134 RGATIIYATHIFDGL-ENWPSHIVYVAHG 161
R T++YATHIFDGL W ++++ G
Sbjct: 198 RNCTVVYATHIFDGLGHKWCDRVIHIDAG 226
>UNIPROTKB|Q59QD0 [details] [associations]
symbol:CAF16 "Potential CCR4-NOT complex associated factor
Caf16p" species:237561 "Candida albicans SC5314" [GO:0005524 "ATP
binding" evidence=ISS] InterPro:IPR003439 InterPro:IPR003593
Pfam:PF00005 PROSITE:PS50893 SMART:SM00382 CGD:CAL0004927
GO:GO:0005524 GO:GO:0006200 GO:GO:0016887 eggNOG:COG4586
HOGENOM:HOG000200636 KO:K12608 EMBL:AACQ01000177 EMBL:AACQ01000176
RefSeq:XP_711876.1 RefSeq:XP_711905.1 ProteinModelPortal:Q59QD0
STRING:Q59QD0 GeneID:3646477 GeneID:3646486 KEGG:cal:CaO19.388
KEGG:cal:CaO19.8018 Uniprot:Q59QD0
Length = 320
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 59/149 (39%), Positives = 84/149 (56%)
Query: 16 HDTALTSSGD-LSYLGGEWRREVAFAGFEVPIQMDVSAEKMIFGVAGIDPQ-RRAELIKV 73
H+ A + + ++YLG EW I+ D+ ++ + G Q RR LI +
Sbjct: 85 HEQANSDINNYITYLGTEWATNSI-------IKRDIPVNLLLASIGGETYQDRRNLLIDI 137
Query: 74 LDIDLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEITXXXXXXXXXXXXXXXXKECEE 133
LDID SW M +SDG+RRRVQI MGL+KP+K+LLLDE+T +EC+E
Sbjct: 138 LDIDPSWSMLNISDGERRRVQIAMGLVKPWKLLLLDEVTIDLDVVVRSKLLNYLKQECQE 197
Query: 134 RGATIIYATHIFDGL-ENWPSHIVYVAHG 161
R T++YATHIFDGL W ++++ G
Sbjct: 198 RNCTVVYATHIFDGLGHKWCDRVIHIDAG 226
>GENEDB_PFALCIPARUM|PF14_0321 [details] [associations]
symbol:PF14_0321 "ABC transporter, putative"
species:5833 "Plasmodium falciparum" [GO:0042626 "ATPase activity,
coupled to transmembrane movement of substances" evidence=ISS]
[GO:0006810 "transport" evidence=ISS] [GO:0016020 "membrane"
evidence=ISS] InterPro:IPR003439 InterPro:IPR003593 Pfam:PF00005
PROSITE:PS50893 SMART:SM00382 GO:GO:0005524 GO:GO:0006200
GO:GO:0016887 KO:K12608 EMBL:AE014187 RefSeq:XP_001348495.2
ProteinModelPortal:Q8ILC3 EnsemblProtists:PF14_0321:mRNA
GeneID:811903 KEGG:pfa:PF14_0321 EuPathDB:PlasmoDB:PF3D7_1434000
ProtClustDB:CLSZ2432344 Uniprot:Q8ILC3
Length = 257
Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 42/161 (26%), Positives = 80/161 (49%)
Query: 1 MVEPEMVKVLGRSAFHDTALTSSGDLSYLGGEWRREVAFAGFEVPIQMDVSAEKMIFGVA 60
+++ V + + AFHDT + S + Y+G W E A M++S + F
Sbjct: 60 LIKENEVLIFNKQAFHDTDI--SNKIGYVGEWWSEEYA---------MNISIKDFCFNYE 108
Query: 61 GIDPQRRAELIKVLDIDLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEITXXXXXXXX 120
+R L+K+ ++D + + +S G+R++VQI + ++ + + DE T
Sbjct: 109 YT--KRYKNLLKLFELDENKIISNLSKGERKKVQIMVNIIVRKDIYIFDEATESLDLVSR 166
Query: 121 XXXXXXXXKECEERGATIIYATHIFDGLENWPSHIVYVAHG 161
KEC + + +IY+THIFD ++ W +H++Y++ G
Sbjct: 167 KLLLEFLKKECIKYNSIVIYSTHIFDHMDKWSTHVLYLSEG 207
>TIGR_CMR|BA_3653 [details] [associations]
symbol:BA_3653 "ABC transporter, ATP-binding protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0006810
"transport" evidence=ISS] [GO:0042626 "ATPase activity, coupled to
transmembrane movement of substances" evidence=ISS]
InterPro:IPR003439 InterPro:IPR003593 InterPro:IPR017871
Pfam:PF00005 PROSITE:PS00211 PROSITE:PS50893 SMART:SM00382
GO:GO:0005524 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0006200 GO:GO:0016887 KO:K09687
RefSeq:NP_845918.1 RefSeq:YP_020288.1 RefSeq:YP_029645.1
ProteinModelPortal:Q81YA2 DNASU:1085889
EnsemblBacteria:EBBACT00000011208 EnsemblBacteria:EBBACT00000018155
EnsemblBacteria:EBBACT00000023505 GeneID:1085889 GeneID:2818270
GeneID:2848059 KEGG:ban:BA_3653 KEGG:bar:GBAA_3653 KEGG:bat:BAS3388
OMA:KEGVTHE ProtClustDB:CLSK917117
BioCyc:BANT260799:GJAJ-3450-MONOMER
BioCyc:BANT261594:GJ7F-3559-MONOMER Uniprot:Q81YA2
Length = 297
Score = 129 (50.5 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 33/111 (29%), Positives = 58/111 (52%)
Query: 54 KMIFGVAGI-DPQRRAELIKVLDIDLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEIT 112
K++ G+ G+ D +RR ELI+ L D+ + K+S G +++V I + +VL+LDE T
Sbjct: 96 KLMQGMRGLKDTKRRDELIERLQFDVKTPIRKMSKGMKQKVGIVAAFMHDPEVLILDEPT 155
Query: 113 XXXXXXXXXXXXXXXXKECEERGATIIYATHIFDGLENWPSHIVYVAHGKL 163
+E ++RG TI+ ++HIF +E + + G+L
Sbjct: 156 SGLDPLMQQVFIDLIVEE-KQRGKTILMSSHIFTEIERTCDRVAIIKDGRL 205
>TIGR_CMR|SPO_1511 [details] [associations]
symbol:SPO_1511 "efflux ABC transporter, ATP-binding
protein" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006810 "transport" evidence=ISS]
[GO:0042626 "ATPase activity, coupled to transmembrane movement of
substances" evidence=ISS] InterPro:IPR003439 InterPro:IPR003593
Pfam:PF00005 PROSITE:PS50893 SMART:SM00382 GO:GO:0005524
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006200 GO:GO:0016887
KO:K01990 InterPro:IPR022467 TIGRFAMs:TIGR03864 RefSeq:YP_166752.1
ProteinModelPortal:Q5LTA3 GeneID:3192674 KEGG:sil:SPO1511
PATRIC:23376337 OMA:LWATHLT ProtClustDB:CLSK892102 Uniprot:Q5LTA3
Length = 243
Score = 115 (45.5 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 45/161 (27%), Positives = 74/161 (45%)
Query: 21 TSSGDLSYLGGEW----RREVAFAG--FEVP-IQMDVSAEK------MIFGVAGIDPQRR 67
T SG +S G + R +A G F+ P + +D+S + + G++G R
Sbjct: 55 TRSGQISVAGHDLSQNPRAALARIGVVFQQPTLDLDLSVMRNLTYFAALHGLSGRTAHTR 114
Query: 68 AELIKVLD-IDLSWRMHK----VSDGQRRRVQICMGLLKPFKVLLLDEITXXXXXXXXXX 122
+ L+ +DLS R H+ ++ G RRR +I L+ VLLLDE T
Sbjct: 115 --IAAALERLDLSERAHERARDLNGGHRRRTEIARALIHDPSVLLLDEPTVGLDAASRKA 172
Query: 123 XXXXXXKECEERGATIIYATHIFDGLENWPSHIVYVAHGKL 163
ERG T+++ATH+ D +E+ ++ + G+L
Sbjct: 173 ITDHVHALSRERGLTVLWATHLTDEIED-DDQLLILHRGRL 212
>UNIPROTKB|O86311 [details] [associations]
symbol:Rv1218c "Antibiotic transporter ATP-binding protein"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0046677 "response to
antibiotic" evidence=IDA] InterPro:IPR003439 InterPro:IPR003593
InterPro:IPR017871 Pfam:PF00005 PROSITE:PS00211 PROSITE:PS50893
SMART:SM00382 GO:GO:0005886 GO:GO:0005524 EMBL:BX842575
GenomeReviews:AL123456_GR GO:GO:0006200 GO:GO:0046677 GO:GO:0016887
KO:K09687 EMBL:CP003248 PIR:H70610 RefSeq:NP_215734.1
RefSeq:YP_006514593.1 ProteinModelPortal:O86311 SMR:O86311
PRIDE:O86311 EnsemblBacteria:EBMYCT00000000272 GeneID:13319797
GeneID:888518 KEGG:mtu:Rv1218c KEGG:mtv:RVBD_1218c PATRIC:18151258
TubercuList:Rv1218c OMA:MRHLSRT ProtClustDB:CLSK791023
Uniprot:O86311
Length = 311
Score = 116 (45.9 bits), Expect = 0.00012, P = 0.00012
Identities = 42/168 (25%), Positives = 74/168 (44%)
Query: 24 GDLSYLGGE-W------RREVAFAGFEVPIQMDVSAEKMIFGVA----GIDPQRRAELIK 72
G + LGG+ W R +A+ +V + ++ + I +A GID RRAELI+
Sbjct: 64 GSVRLLGGDPWTDAVDLHRHIAYVPGDVTLWPSLTGGETIDLLARMRGGIDNARRAELIE 123
Query: 73 VLDIDLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEITXXXXXXXXXXXXXXXXKECE 132
+D + + S G R++V + L +LLLDE + E
Sbjct: 124 RFGLDPTKKARTYSKGNRQKVSLISALSSHATLLLLDEPSSGLDPLMENVFQQCIG-EAR 182
Query: 133 ERGATIIYATHIFDGLENWPSHIVYVAHGKLQLAMPMDKVKEASKLSL 180
+RG T++ ++HI E + + GK + +D ++ S+ S+
Sbjct: 183 QRGVTVLLSSHILAETEALCEKVTIIRAGKTVESGSLDALRHLSRTSI 230
>UNIPROTKB|P34358 [details] [associations]
symbol:ced-7 "ABC transporter ced-7" species:6239
"Caenorhabditis elegans" [GO:0042626 "ATPase activity, coupled to
transmembrane movement of substances" evidence=NAS]
InterPro:IPR003439 InterPro:IPR003593 InterPro:IPR017871
Pfam:PF00005 PROSITE:PS00211 PROSITE:PS50893 SMART:SM00382
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0042626
eggNOG:COG1131 InterPro:IPR026082 PANTHER:PTHR19229
GeneTree:ENSGT00700000104262 EMBL:Z29117 GO:GO:0043652
GO:GO:0012501 EMBL:AF049142 PIR:F88559 PIR:T42749
RefSeq:NP_001021225.1 RefSeq:NP_001021226.1 RefSeq:NP_499115.2
UniGene:Cel.6187 ProteinModelPortal:P34358 SMR:P34358 STRING:P34358
TCDB:3.A.1.211.4 PaxDb:P34358 PRIDE:P34358 EnsemblMetazoa:C48B4.4c
GeneID:176352 KEGG:cel:CELE_C48B4.4 UCSC:C48B4.4b CTD:176352
WormBase:C48B4.4a WormBase:C48B4.4b WormBase:C48B4.4c
HOGENOM:HOG000019143 InParanoid:P34358 NextBio:892202
ArrayExpress:P34358 Uniprot:P34358
Length = 1704
Score = 122 (48.0 bits), Expect = 0.00025, P = 0.00025
Identities = 41/154 (26%), Positives = 74/154 (48%)
Query: 20 LTSSG-DLSYLGGEWRREVAFAGFEVPI--QMDVSAE-KMIFGVAGI-DPQRRAELIKVL 74
+T G D+ GE RR + P+ Q+ VS K+++G+ G + + ++ ++L
Sbjct: 604 ITICGYDVGNEPGETRRHIGMCPQYNPLYDQLTVSEHLKLVYGLKGAREKDFKQDMKRLL 663
Query: 75 -DIDLSWRMHK----VSDGQRRRVQICMGLLKPFKVLLLDEITXXXXXXXXXXXXXXXXK 129
D+ L ++ ++ +S G +R++ +CM L+ +V+LLDE T +
Sbjct: 664 SDVKLDFKENEKAVNLSGGMKRKLCVCMALIGDSEVVLLDEPTAGMDPGARQDVQKLVER 723
Query: 130 ECEERGATIIYATHIFDGLENWPSHIVYVAHGKL 163
E R TI+ TH D E + ++HGKL
Sbjct: 724 EKANR--TILLTTHYMDEAERLGDWVFIMSHGKL 755
>WB|WBGene00000421 [details] [associations]
symbol:ced-7 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0043652 "engulfment of apoptotic cell" evidence=IMP]
[GO:0012501 "programmed cell death" evidence=IMP] [GO:0006810
"transport" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0042626 "ATPase activity, coupled to
transmembrane movement of substances" evidence=ISS]
InterPro:IPR003439 InterPro:IPR003593 InterPro:IPR017871
Pfam:PF00005 PROSITE:PS00211 PROSITE:PS50893 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0042626 InterPro:IPR026082
PANTHER:PTHR19229 GeneTree:ENSGT00700000104262 EMBL:Z29117
GO:GO:0043652 GO:GO:0012501 UniGene:Cel.6187 GeneID:176352
KEGG:cel:CELE_C48B4.4 CTD:176352 HOGENOM:HOG000019143
RefSeq:NP_001255012.1 ProteinModelPortal:C0P274 SMR:C0P274
STRING:C0P274 PRIDE:C0P274 EnsemblMetazoa:C48B4.4d
WormBase:C48B4.4d OMA:REVWELL ArrayExpress:C0P274 Uniprot:C0P274
Length = 1758
Score = 122 (48.0 bits), Expect = 0.00026, P = 0.00026
Identities = 41/154 (26%), Positives = 74/154 (48%)
Query: 20 LTSSG-DLSYLGGEWRREVAFAGFEVPI--QMDVSAE-KMIFGVAGI-DPQRRAELIKVL 74
+T G D+ GE RR + P+ Q+ VS K+++G+ G + + ++ ++L
Sbjct: 658 ITICGYDVGNEPGETRRHIGMCPQYNPLYDQLTVSEHLKLVYGLKGAREKDFKQDMKRLL 717
Query: 75 -DIDLSWRMHK----VSDGQRRRVQICMGLLKPFKVLLLDEITXXXXXXXXXXXXXXXXK 129
D+ L ++ ++ +S G +R++ +CM L+ +V+LLDE T +
Sbjct: 718 SDVKLDFKENEKAVNLSGGMKRKLCVCMALIGDSEVVLLDEPTAGMDPGARQDVQKLVER 777
Query: 130 ECEERGATIIYATHIFDGLENWPSHIVYVAHGKL 163
E R TI+ TH D E + ++HGKL
Sbjct: 778 EKANR--TILLTTHYMDEAERLGDWVFIMSHGKL 809
>TIGR_CMR|CHY_0900 [details] [associations]
symbol:CHY_0900 "daunorubicin resistance ABC transporter,
ATP-binding protein" species:246194 "Carboxydothermus
hydrogenoformans Z-2901" [GO:0015893 "drug transport" evidence=ISS]
[GO:0042626 "ATPase activity, coupled to transmembrane movement of
substances" evidence=ISS] InterPro:IPR003439 InterPro:IPR003593
InterPro:IPR005894 InterPro:IPR017871 Pfam:PF00005 PROSITE:PS00211
PROSITE:PS50893 SMART:SM00382 GO:GO:0005524 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0006810 GO:GO:0006200
eggNOG:COG1131 GO:GO:0016887 KO:K09687 TIGRFAMs:TIGR01188
RefSeq:YP_359749.1 ProteinModelPortal:Q3ADN5 STRING:Q3ADN5
GeneID:3727866 KEGG:chy:CHY_0900 PATRIC:21274934 OMA:RIRRTEG
ProtClustDB:CLSK2772345 BioCyc:CHYD246194:GJCN-900-MONOMER
Uniprot:Q3ADN5
Length = 322
Score = 113 (44.8 bits), Expect = 0.00029, P = 0.00029
Identities = 35/124 (28%), Positives = 56/124 (45%)
Query: 55 MIFGVAGIDPQRRAELIKVLDIDLSWRMHKV----SDGQRRRVQICMGLLKPFKVLLLDE 110
+I+G+ + + R E++ + ++L R + S G +RR++I GLL K+L LDE
Sbjct: 102 LIYGIPARERRERIEMVLKM-VELYERKDSLVQTFSGGMKRRLEIARGLLHHPKILFLDE 160
Query: 111 ITXXXXXXXXXXXXXXXXKECEERGATIIYATHIFDGLENWPSHIVYVAHGKLQLAMPMD 170
T K +E+G TI TH D EN I + GK+ D
Sbjct: 161 PTVGLDPQTRAHIWDYIHKIRKEKGITIFLTTHYMDEAENC-DRIAVIDQGKIIALDTPD 219
Query: 171 KVKE 174
+K+
Sbjct: 220 NLKQ 223
>UNIPROTKB|Q8EKL9 [details] [associations]
symbol:SO_0073 "ABC-type efflux system ATPase component"
species:211586 "Shewanella oneidensis MR-1" [GO:0006810 "transport"
evidence=ISS] [GO:0042626 "ATPase activity, coupled to
transmembrane movement of substances" evidence=ISS]
InterPro:IPR003439 InterPro:IPR003593 Pfam:PF00005 PROSITE:PS50893
SMART:SM00382 GO:GO:0005524 GO:GO:0042626 HSSP:P58301 EMBL:AE014299
GenomeReviews:AE014299_GR KO:K01990 RefSeq:NP_715715.1
ProteinModelPortal:Q8EKL9 GeneID:1167971 KEGG:son:SO_0073
PATRIC:23519845 OMA:CTPILEF ProtClustDB:CLSK905579 Uniprot:Q8EKL9
Length = 287
Score = 110 (43.8 bits), Expect = 0.00052, P = 0.00052
Identities = 26/116 (22%), Positives = 56/116 (48%)
Query: 63 DPQRRAELIKVLDIDLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEITXXXXXXXXXX 122
D Q + + ++D++ ++ ++S GQR+ + + M + ++L+LDE
Sbjct: 118 DMQLEQDWLARFELDVTQQVQRLSVGQRQSLALIMAMAYRPELLILDEPVASLDPIVRRK 177
Query: 123 XXXXXXKECEERGATIIYATHIFDGLENWPSHIVYVAHGKLQLAMPMDKVKEASKL 178
E G+ +++++HI LE SH+ + G+L L +D ++E +L
Sbjct: 178 FMVDLFDLALESGSAVLFSSHITSDLERVASHVALIKQGELVLFKEIDALREEVRL 233
>TIGR_CMR|SO_0073 [details] [associations]
symbol:SO_0073 "ABC transporter, ATP-binding protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0006810 "transport"
evidence=ISS] [GO:0042626 "ATPase activity, coupled to
transmembrane movement of substances" evidence=ISS]
InterPro:IPR003439 InterPro:IPR003593 Pfam:PF00005 PROSITE:PS50893
SMART:SM00382 GO:GO:0005524 GO:GO:0042626 HSSP:P58301 EMBL:AE014299
GenomeReviews:AE014299_GR KO:K01990 RefSeq:NP_715715.1
ProteinModelPortal:Q8EKL9 GeneID:1167971 KEGG:son:SO_0073
PATRIC:23519845 OMA:CTPILEF ProtClustDB:CLSK905579 Uniprot:Q8EKL9
Length = 287
Score = 110 (43.8 bits), Expect = 0.00052, P = 0.00052
Identities = 26/116 (22%), Positives = 56/116 (48%)
Query: 63 DPQRRAELIKVLDIDLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEITXXXXXXXXXX 122
D Q + + ++D++ ++ ++S GQR+ + + M + ++L+LDE
Sbjct: 118 DMQLEQDWLARFELDVTQQVQRLSVGQRQSLALIMAMAYRPELLILDEPVASLDPIVRRK 177
Query: 123 XXXXXXKECEERGATIIYATHIFDGLENWPSHIVYVAHGKLQLAMPMDKVKEASKL 178
E G+ +++++HI LE SH+ + G+L L +D ++E +L
Sbjct: 178 FMVDLFDLALESGSAVLFSSHITSDLERVASHVALIKQGELVLFKEIDALREEVRL 233
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.135 0.404 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 259 228 0.00081 113 3 11 22 0.38 33
32 0.41 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 17
No. of states in DFA: 609 (65 KB)
Total size of DFA: 185 KB (2106 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.96u 0.13s 15.09t Elapsed: 00:00:01
Total cpu time: 14.96u 0.13s 15.09t Elapsed: 00:00:01
Start: Sat May 11 10:46:54 2013 End: Sat May 11 10:46:55 2013