BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024989
(259 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LZ98|AB20I_ARATH ABC transporter I family member 20 OS=Arabidopsis thaliana
GN=ABCI20 PE=2 SV=1
Length = 328
Score = 430 bits (1106), Expect = e-120, Method: Compositional matrix adjust.
Identities = 226/260 (86%), Positives = 245/260 (94%), Gaps = 5/260 (1%)
Query: 1 MVEPEMVKVLGRSAFHDTALTSSGDLSYLGGEWRREVAFAGFEVPIQMDVSAEKMIFGVA 60
MVEP MV+VLGRSAFHDT LTSSGDL YLGGEWRR+VAFAGFEVPIQMD+SAEKMIFGVA
Sbjct: 73 MVEPHMVRVLGRSAFHDTGLTSSGDLCYLGGEWRRDVAFAGFEVPIQMDISAEKMIFGVA 132
Query: 61 GIDPQRRAELIKVLDIDLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLAR 120
GIDPQRR ELIKVLDID+SWR+HKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLAR
Sbjct: 133 GIDPQRRDELIKVLDIDISWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLAR 192
Query: 121 ADLLRFLRKECEERGATIIYATHIFDGLENWPSHIVYVAHGKLQLAMPMDKVKEASKLSL 180
ADLL+FLRKECEERGATIIYATHIFDGLE+WP+HIVYVA+GKLQLA+PM+KVKE SK SL
Sbjct: 193 ADLLKFLRKECEERGATIIYATHIFDGLEDWPTHIVYVANGKLQLALPMEKVKETSKKSL 252
Query: 181 MRTVESWLRKERDEERKRRRERKASGLPEFDKQIHGSRVTGDPAQAAVRVMNNGWAAGRL 240
MRTVESWLRKERDEERKRR+ERKA+GLPEF+ + SRVTGDPA R++NNGWAAGRL
Sbjct: 253 MRTVESWLRKERDEERKRRKERKANGLPEFETRTEESRVTGDPA----RMLNNGWAAGRL 308
Query: 241 HSTVA-GEENFVLSTNRVLR 259
HSTVA GE+NFVLS+NRVLR
Sbjct: 309 HSTVAGGEDNFVLSSNRVLR 328
>sp|Q9XF19|AB21I_ARATH ABC transporter I family member 21 OS=Arabidopsis thaliana
GN=ABCI21 PE=2 SV=1
Length = 282
Score = 256 bits (655), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 121/187 (64%), Positives = 149/187 (79%), Gaps = 2/187 (1%)
Query: 5 EMVKVLGRSAFHDTALTSSGDLSYLGGEWRREVAFAGFEVPIQMDVSAEKMIFGVAGIDP 64
+V+VL RSAFHDT L SGDLSYLGG W + AG ++P+Q D SAE MIFGV GIDP
Sbjct: 69 NVVQVLDRSAFHDTELVCSGDLSYLGGSWSKTAGSAG-DIPLQGDFSAEHMIFGVEGIDP 127
Query: 65 QRRAELIKVLDIDLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLL 124
RR +LI +LDI+L WRMHKVSDGQRRRVQICMGLL PFKVLLLDE+TVDLDV+AR DLL
Sbjct: 128 FRREKLIDLLDINLQWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEVTVDLDVVARMDLL 187
Query: 125 RFLRKECEERGATIIYATHIFDGLENWPSHIVYVAHGKLQLAMPMDKVKE-ASKLSLMRT 183
F ++ECE+RGATI+YATHIFDGLE W SH+ Y+ G+L+L+ +D++K+ + +L+
Sbjct: 188 EFFKEECEQRGATIVYATHIFDGLETWASHLAYINGGELKLSAKLDEIKDLKTSPNLLSV 247
Query: 184 VESWLRK 190
VE+WLR
Sbjct: 248 VEAWLRS 254
>sp|Q3EDJ0|AB19I_ARATH ABC transporter I family member 19 OS=Arabidopsis thaliana
GN=ABCI19 PE=2 SV=1
Length = 290
Score = 252 bits (644), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 121/188 (64%), Positives = 145/188 (77%), Gaps = 2/188 (1%)
Query: 5 EMVKVLGRSAFHDTALTSSGDLSYLGGEWRREVAFAGFEVPIQMDVSAEKMIFGVAGIDP 64
+V+VL RSAFHDT L SGDLSYLGG W + V AG EVP+Q D SAE MIFGV G DP
Sbjct: 70 NVVQVLSRSAFHDTQLVCSGDLSYLGGSWSKTVGSAG-EVPLQGDFSAEHMIFGVEGTDP 128
Query: 65 QRRAELIKVLDIDLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLL 124
RR +LI +LDI+L WRMHKVSDGQ+RRVQICMGLL PFKVLLLDE+TVDLDV+AR DLL
Sbjct: 129 VRREKLIDLLDINLQWRMHKVSDGQKRRVQICMGLLHPFKVLLLDEVTVDLDVVARMDLL 188
Query: 125 RFLRKECEERGATIIYATHIFDGLENWPSHIVYVAHGKLQLAMPMDKVKE-ASKLSLMRT 183
F ++EC++RGATI+YATHIFDGLE W +H+ Y+ G+L M ++E + +L+
Sbjct: 189 EFFKEECDQRGATIVYATHIFDGLETWATHLAYIQDGELNRLSKMTDIEELKTSPNLLSV 248
Query: 184 VESWLRKE 191
VESWLR E
Sbjct: 249 VESWLRSE 256
>sp|Q7Z991|YE31_SCHPO Uncharacterized ABC transporter ATP-binding protein C20G4.01
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC20G4.01 PE=4 SV=2
Length = 280
Score = 176 bits (445), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 94/206 (45%), Positives = 128/206 (62%), Gaps = 18/206 (8%)
Query: 7 VKVLGRSAFHDTALTSSGDLSYLGGEWRREVAFAGFEVPIQMDVSAEKMIFGVAGID-PQ 65
+ V G+ F + SS YLG EW I D+S ++I V G +
Sbjct: 61 ISVGGKDPFRE----SSSAFVYLGTEWVNNPV-------IHRDMSVARLIASVGGDKFAE 109
Query: 66 RRAELIKVLDIDLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLR 125
RR LI +LDIDL WRMH VSDG+RRRVQ+CMGLL+PF+VLLLDE+TVDLDVLARADLL
Sbjct: 110 RRDFLISILDIDLRWRMHAVSDGERRRVQLCMGLLRPFEVLLLDEVTVDLDVLARADLLN 169
Query: 126 FLRKECEERGATIIYATHIFDGLENWPSHIVYVAHGKLQLAMPMDKV------KEASKLS 179
FL++E E R ATI+YATHIFDGL WP+H+V+++ G++ P+ K +
Sbjct: 170 FLQEETEVRNATIVYATHIFDGLAEWPTHLVHLSLGRIVDYGPISKFGALMTRSSTGNSA 229
Query: 180 LMRTVESWLRKERDEERKRRRERKAS 205
L+ T WL++++ R E++++
Sbjct: 230 LLETCLEWLKEDKKNRGTREEEKRST 255
>sp|P43569|CAF16_YEAST CCR4-associated factor 16 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=CAF16 PE=1 SV=1
Length = 289
Score = 137 bits (345), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 97/144 (67%), Gaps = 8/144 (5%)
Query: 21 TSSGDLSYLGGEWRREVAFAGFEVPIQMDVSAEKMIFGVAGIDPQRRAE-LIKVLDIDLS 79
T+ +YLG EW I D+ +++ + + R E L+++LDID+
Sbjct: 91 TNYQTTTYLGTEWCHMSI-------INRDIGVLELLKSIGFDHFRERGERLVRILDIDVR 143
Query: 80 WRMHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLRFLRKECEERGATII 139
WRMH++SDGQ+RRVQ+ MGLLKP++VLLLDE+TVDLDV+ARA LL FL+ E E R +++
Sbjct: 144 WRMHRLSDGQKRRVQLAMGLLKPWRVLLLDEVTVDLDVIARARLLEFLKWETETRRCSVV 203
Query: 140 YATHIFDGLENWPSHIVYVAHGKL 163
YATHIFDGL WP+ + ++ GK+
Sbjct: 204 YATHIFDGLAKWPNQVYHMKSGKI 227
>sp|Q38UU0|ECFA1_LACSS Energy-coupling factor transporter ATP-binding protein EcfA 1
OS=Lactobacillus sakei subsp. sakei (strain 23K)
GN=ecfA1 PE=3 SV=1
Length = 291
Score = 64.7 bits (156), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 63/126 (50%), Gaps = 4/126 (3%)
Query: 42 FEVPIQMDVSAEKMIFGVAGIDPQRRA----ELIKVLDIDLSWRMHKVSDGQRRRVQICM 97
FE +Q D++ FGV + RA EL+ + + L +S GQ RRV I
Sbjct: 99 FEATVQKDIAFGPQNFGVPEAEALERAKAMVELVGLPEAVLEQSPFDLSGGQMRRVAIAG 158
Query: 98 GLLKPFKVLLLDEITVDLDVLARADLLRFLRKECEERGATIIYATHIFDGLENWPSHIVY 157
L +VL+LDE T LD + R +++ K E+G TI+ TH D + N+ H+V
Sbjct: 159 VLAMQPEVLILDEPTAGLDPVGRREMMGLFEKLHREQGMTIVMVTHQMDDVANYADHVVV 218
Query: 158 VAHGKL 163
+ +G +
Sbjct: 219 LENGGI 224
>sp|Q839D4|ECFA2_ENTFA Energy-coupling factor transporter ATP-binding protein EcfA 2
OS=Enterococcus faecalis (strain ATCC 700802 / V583)
GN=ecfA2 PE=3 SV=2
Length = 289
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 68/126 (53%), Gaps = 4/126 (3%)
Query: 42 FEVPIQMDVSAEKMIFGVAGIDPQRRAE-LIKVLDIDLSWRMH---KVSDGQRRRVQICM 97
FE ++ D++ FGV+ + ++ A+ ++ ++ +D + H ++S GQ RRV I
Sbjct: 99 FEETVERDIAFGPKNFGVSDEEAKKLAKKMLDLVGLDEKYLQHSPFELSGGQMRRVAIAG 158
Query: 98 GLLKPFKVLLLDEITVDLDVLARADLLRFLRKECEERGATIIYATHIFDGLENWPSHIVY 157
L +VL+LDE T LD R +++ + +E TI+ TH+ D + N+ H++
Sbjct: 159 VLAMEPEVLVLDEPTAGLDPKGRKEMMEMFSRLHKEHNMTIVLVTHLMDDVANYADHVIV 218
Query: 158 VAHGKL 163
+ G++
Sbjct: 219 LEKGQI 224
>sp|Q8DWR4|ECFA1_STRA5 Energy-coupling factor transporter ATP-binding protein EcfA 1
OS=Streptococcus agalactiae serotype V (strain ATCC
BAA-611 / 2603 V/R) GN=ecfA1 PE=3 SV=1
Length = 280
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 67/129 (51%), Gaps = 5/129 (3%)
Query: 42 FEVPIQMDVSAEKMIFGVAGIDPQRRAE----LIKVLDIDLSWRMHKVSDGQRRRVQICM 97
FE + DV+ FG++ I+ +R AE L+ + + ++S GQ RRV I
Sbjct: 99 FEETVLKDVAFGPQNFGISQIEAERLAEEKLRLVGISEDLFDKNPFELSGGQMRRVAIAG 158
Query: 98 GLLKPFKVLLLDEITVDLDVLARADLLRFLRKECEERGATIIYATHIFDGLENWPSHIVY 157
L KVL+LDE T LD R +L+ L K ++G TI+ TH+ D + ++ ++
Sbjct: 159 ILAMEPKVLVLDEPTAGLDPKGRKELMT-LFKNLHKKGMTIVLVTHLMDDVADYADYVYV 217
Query: 158 VAHGKLQLA 166
+ GK+ L+
Sbjct: 218 LEAGKVTLS 226
>sp|Q8E2L3|ECFA1_STRA3 Energy-coupling factor transporter ATP-binding protein EcfA 1
OS=Streptococcus agalactiae serotype III (strain NEM316)
GN=ecfA1 PE=3 SV=1
Length = 280
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 67/129 (51%), Gaps = 5/129 (3%)
Query: 42 FEVPIQMDVSAEKMIFGVAGIDPQRRAE----LIKVLDIDLSWRMHKVSDGQRRRVQICM 97
FE + DV+ FG++ I+ +R AE L+ + + ++S GQ RRV I
Sbjct: 99 FEETVLKDVAFGPQNFGISQIEAERLAEEKLRLVGISEDLFDKNPFELSGGQMRRVAIAG 158
Query: 98 GLLKPFKVLLLDEITVDLDVLARADLLRFLRKECEERGATIIYATHIFDGLENWPSHIVY 157
L KVL+LDE T LD R +L+ L K ++G TI+ TH+ D + ++ ++
Sbjct: 159 ILAMEPKVLVLDEPTAGLDPKGRKELMT-LFKNLHKKGMTIVLVTHLMDDVADYADYVYV 217
Query: 158 VAHGKLQLA 166
+ GK+ L+
Sbjct: 218 LEAGKVTLS 226
>sp|Q3JYF5|ECFA1_STRA1 Energy-coupling factor transporter ATP-binding protein EcfA 1
OS=Streptococcus agalactiae serotype Ia (strain ATCC
27591 / A909 / CDC SS700) GN=ecfA1 PE=3 SV=1
Length = 280
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 67/129 (51%), Gaps = 5/129 (3%)
Query: 42 FEVPIQMDVSAEKMIFGVAGIDPQRRAE----LIKVLDIDLSWRMHKVSDGQRRRVQICM 97
FE + DV+ FG++ I+ +R AE L+ + + ++S GQ RRV I
Sbjct: 99 FEETVLKDVAFGPQNFGISQIEAERLAEEKLRLVGISEDLFDKNPFELSGGQMRRVAIAG 158
Query: 98 GLLKPFKVLLLDEITVDLDVLARADLLRFLRKECEERGATIIYATHIFDGLENWPSHIVY 157
L KVL+LDE T LD R +L+ L K ++G TI+ TH+ D + ++ ++
Sbjct: 159 ILAMEPKVLVLDEPTAGLDPKGRKELMT-LFKNLHKKGMTIVLVTHLMDDVADYADYVYV 217
Query: 158 VAHGKLQLA 166
+ GK+ L+
Sbjct: 218 LEAGKVTLS 226
>sp|P34358|CED7_CAEEL ABC transporter ced-7 OS=Caenorhabditis elegans GN=ced-7 PE=1 SV=6
Length = 1704
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 75/142 (52%), Gaps = 11/142 (7%)
Query: 31 GEWRREVAFAGFEVPI--QMDVSAE-KMIFGVAGIDPQRRAELIKVL--DIDLSWRMHK- 84
GE RR + P+ Q+ VS K+++G+ G + + +K L D+ L ++ ++
Sbjct: 616 GETRRHIGMCPQYNPLYDQLTVSEHLKLVYGLKGAREKDFKQDMKRLLSDVKLDFKENEK 675
Query: 85 ---VSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLRFLRKECEERGATIIYA 141
+S G +R++ +CM L+ +V+LLDE T +D AR D+ + + +E R TI+
Sbjct: 676 AVNLSGGMKRKLCVCMALIGDSEVVLLDEPTAGMDPGARQDVQKLVEREKANR--TILLT 733
Query: 142 THIFDGLENWPSHIVYVAHGKL 163
TH D E + ++HGKL
Sbjct: 734 THYMDEAERLGDWVFIMSHGKL 755
Score = 40.4 bits (93), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%)
Query: 86 SDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLRFLRKECEERGATIIYATHIF 145
S GQ+R++ + + LL P ++++LDE T +D AR ++ L E + ++ +H
Sbjct: 1504 SGGQKRKISVGVALLAPTQMIILDEPTAGIDPKARREVWELLLWCREHSNSALMLTSHSM 1563
Query: 146 DGLENWPSHIVYVAHGKL 163
D E S I + G L
Sbjct: 1564 DECEALCSRIAVLNRGSL 1581
>sp|Q87SV4|THIQ_VIBPA Thiamine import ATP-binding protein ThiQ OS=Vibrio parahaemolyticus
serotype O3:K6 (strain RIMD 2210633) GN=thiQ PE=3 SV=1
Length = 234
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 85 VSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLRFLRKECEERGATIIYATHI 144
+S GQR+RV + ++P + LLDE LD + R ++L ++K ERG T++ TH
Sbjct: 130 LSGGQRQRVALARCFVQPHPMWLLDEPFSALDPVLREEMLSLVKKLAAERGITVLMVTHH 189
Query: 145 FDGLENWPSHIVYVAHGKLQLAMPMDKVKEASKLSLMRTVESWLR 189
+ SH +VA+GK++ +D + +T+++++R
Sbjct: 190 LSDAKAIASHFAFVANGKVEAVGEIDALTAEHP---SKTLQAFVR 231
>sp|Q8T6J5|ABCA2_DICDI ABC transporter A family member 2 OS=Dictyostelium discoideum
GN=abcA2 PE=3 SV=1
Length = 1621
Score = 54.7 bits (130), Expect = 6e-07, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 62/111 (55%), Gaps = 7/111 (6%)
Query: 58 GVAGIDPQRRAELIKVLDIDLSWRMHK----VSDGQRRRVQICMGLLKPFKVLLLDEITV 113
GV+ + QR AE + V ++DL ++H +S GQ+R++ + + + V+ LDE++
Sbjct: 589 GVSPSEIQREAEKMAV-EVDLGEKIHSQAGSLSGGQKRKLCLGIAFIGRSDVIFLDEVSS 647
Query: 114 DLDVLARADLLRFLRKECEERGATIIYATHIFDGLENWPSHIVYVAHGKLQ 164
+D L+R + FL K ++G TII TH + + I ++HGKL+
Sbjct: 648 GMDPLSRRVVWDFLLK--YKKGRTIILTTHYLEEADYLGDRIAIISHGKLR 696
>sp|Q6HG98|Y3105_BACHK Putative ABC transporter ATP-binding protein BT9727_3105
OS=Bacillus thuringiensis subsp. konkukian (strain
97-27) GN=BT9727_3105 PE=3 SV=1
Length = 551
Score = 54.7 bits (130), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 68/135 (50%), Gaps = 8/135 (5%)
Query: 37 VAFAGFEVPIQMDVSAEKMIFGVAGID------PQRRAELIKVLDID--LSWRMHKVSDG 88
+ F E + MD +++ F + I +R AELI L L +H +S G
Sbjct: 87 MVFQNPENQLVMDTVIQELAFSLENIGLPSHIIQKRIAELISFLGFQDLLHQSVHTLSGG 146
Query: 89 QRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLRFLRKECEERGATIIYATHIFDGL 148
Q++ V + L+ K+LLLDE T LD +A + L L++ EE G TI+ + H D +
Sbjct: 147 QKQLVNLAAVLVMQPKLLLLDEPTAQLDPIAAKEFLGLLKRINEELGITIVLSEHRLDEV 206
Query: 149 ENWPSHIVYVAHGKL 163
+ ++ +++G++
Sbjct: 207 IPLATRVICMSNGRI 221
>sp|Q881C1|MODC_PSESM Molybdenum import ATP-binding protein ModC OS=Pseudomonas syringae
pv. tomato (strain DC3000) GN=modC PE=3 SV=1
Length = 362
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 6/119 (5%)
Query: 57 FGVAGID-PQRRAEL---IKVLDID--LSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDE 110
FG+ I PQRR EL ++L ID L R K+S G+R+RV I LL +++LLDE
Sbjct: 102 FGLKRIPRPQRRIELQQATELLGIDHLLERRPDKLSGGERQRVGIARALLTSPRLMLLDE 161
Query: 111 ITVDLDVLARADLLRFLRKECEERGATIIYATHIFDGLENWPSHIVYVAHGKLQLAMPM 169
LD + ++L +L + E ++Y +H D + H+V + GK+ + P+
Sbjct: 162 PLAALDTKRKGEILPYLERLHRELDIPMLYVSHAQDEVARLADHLVLLEAGKVLASGPI 220
>sp|Q88XV1|ECFA2_LACPL Energy-coupling factor transporter ATP-binding protein EcfA 2
OS=Lactobacillus plantarum (strain ATCC BAA-793 / NCIMB
8826 / WCFS1) GN=ecfA2 PE=3 SV=1
Length = 295
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 4/126 (3%)
Query: 42 FEVPIQMDVSAEKMIFGVAGIDPQRRA-ELIKVLDID---LSWRMHKVSDGQRRRVQICM 97
FE + D++ FG + D + A E++ ++ +D L+ +S GQ RRV I
Sbjct: 99 FEETVAKDIAFGPQNFGASEADALKTAAEMLALVGLDESLLTRSPFDLSGGQMRRVAIAG 158
Query: 98 GLLKPFKVLLLDEITVDLDVLARADLLRFLRKECEERGATIIYATHIFDGLENWPSHIVY 157
L +VL+LDE T LD R D++ + ER T++ TH D + N+ +++
Sbjct: 159 VLAMQPQVLVLDEPTAGLDPQGRLDMMEMFARLRHERDLTVVLVTHQMDDVANYADNVIV 218
Query: 158 VAHGKL 163
+ G++
Sbjct: 219 MDRGQI 224
>sp|Q734T1|Y3323_BACC1 Putative ABC transporter ATP-binding protein BCE_3323 OS=Bacillus
cereus (strain ATCC 10987) GN=BCE_3323 PE=3 SV=1
Length = 553
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 8/135 (5%)
Query: 37 VAFAGFEVPIQMDVSAEKMIFGVAGID------PQRRAELIKVLDID--LSWRMHKVSDG 88
+ F E + MD +++ F + I +R AELI L L +H +S G
Sbjct: 89 MVFQNPENQLVMDTVIQELAFSLENIGLPSHIIQKRIAELISFLGFQDLLHQSVHTLSGG 148
Query: 89 QRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLRFLRKECEERGATIIYATHIFDGL 148
Q++ V + L+ K+LLLDE T LD +A + L L++ EE G TI+ + H D +
Sbjct: 149 QKQLVNLAAVLVMQPKLLLLDEPTAQLDPIAAKEFLGLLKRINEELGITIVLSEHRLDEV 208
Query: 149 ENWPSHIVYVAHGKL 163
+ ++ + +G++
Sbjct: 209 IPLATRVICMNNGRI 223
>sp|Q81N53|Y3364_BACAN Putative ABC transporter ATP-binding protein
BA_3364/GBAA_3364/BAS3118 OS=Bacillus anthracis
GN=BA_3364 PE=3 SV=1
Length = 551
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 8/135 (5%)
Query: 37 VAFAGFEVPIQMDVSAEKMIFGVAGID------PQRRAELIKVLDID--LSWRMHKVSDG 88
+ F E + MD +++ F + I +R AELI L L +H +S G
Sbjct: 87 MVFQNPENQLVMDTVIQELAFSLENIGLPSHIIQKRIAELISFLGFQDLLHQSVHTLSGG 146
Query: 89 QRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLRFLRKECEERGATIIYATHIFDGL 148
Q++ V + L+ K+LLLDE T LD +A + L L++ EE G TI+ + H D +
Sbjct: 147 QKQLVNLAAVLVMQPKLLLLDEPTAQLDPIAAKEFLGLLKRINEELGITIVLSEHRLDEV 206
Query: 149 ENWPSHIVYVAHGKL 163
+ ++ + +G++
Sbjct: 207 IPLATRVICMNNGRI 221
>sp|Q0SFW6|METN2_RHOSR Methionine import ATP-binding protein MetN 2 OS=Rhodococcus sp.
(strain RHA1) GN=metN2 PE=3 SV=1
Length = 340
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 67/142 (47%), Gaps = 6/142 (4%)
Query: 65 QRRAELIKVLDIDLSWRMH--KVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARAD 122
+R AEL++ + + R + ++S GQ++RV I L +LL DE T LD D
Sbjct: 122 ERVAELLEFVGLSDKARAYPDQLSGGQKQRVGIARALATSPDLLLADESTSALDPETTQD 181
Query: 123 LLRFLRKECEERGATIIYATHIFDGLENWPSHIVYVAHGK-LQLAMPMDKVKEASKLSLM 181
+LR LRK E G TI+ TH D + + +A G+ ++L D E +
Sbjct: 182 VLRLLRKVNRELGVTIVVITHEMDVVRAVADRVAVLAEGRVVELGTVFDVFSEPQAPASK 241
Query: 182 RTVESWLR---KERDEERKRRR 200
V + LR + D ER R R
Sbjct: 242 SFVSTILRNRPEPADLERLRSR 263
>sp|Q97N51|ECFA1_STRPN Energy-coupling factor transporter ATP-binding protein EcfA 1
OS=Streptococcus pneumoniae serotype 4 (strain ATCC
BAA-334 / TIGR4) GN=ecfA1 PE=3 SV=1
Length = 279
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 5/126 (3%)
Query: 42 FEVPIQMDVSAEKMIFGVAGIDPQRRA-ELIKVLDIDLSW---RMHKVSDGQRRRVQICM 97
FE + DV+ FGV+ D + A E + ++ ID S ++S GQ RRV I
Sbjct: 99 FEETVLKDVAFGPQNFGVSEEDAVKTAREKLALVGIDESLFDRSPFELSGGQMRRVAIAG 158
Query: 98 GLLKPFKVLLLDEITVDLDVLARADLLRFLRKECEERGATIIYATHIFDGLENWPSHIVY 157
L +L+LDE T LD L R +L+ +K + G TI+ TH+ D + + + +
Sbjct: 159 ILAMEPAILVLDEPTAGLDPLGRKELMTLFKK-LHQSGMTIVLVTHLMDDVAEYANQVYV 217
Query: 158 VAHGKL 163
+ G+L
Sbjct: 218 MEKGRL 223
>sp|Q8DMY0|ECFA1_STRR6 Energy-coupling factor transporter ATP-binding protein EcfA 1
OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
GN=ecfA1 PE=3 SV=1
Length = 279
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 5/126 (3%)
Query: 42 FEVPIQMDVSAEKMIFGVAGIDPQRRA-ELIKVLDIDLSW---RMHKVSDGQRRRVQICM 97
FE + DV+ FGV+ D + A E + ++ ID S ++S GQ RRV I
Sbjct: 99 FEETVLKDVAFGPQNFGVSEEDAVKTAREKLALVGIDESLFDRSPFELSGGQMRRVAIAG 158
Query: 98 GLLKPFKVLLLDEITVDLDVLARADLLRFLRKECEERGATIIYATHIFDGLENWPSHIVY 157
L +L+LDE T LD L R +L+ +K + G TI+ TH+ D + + + +
Sbjct: 159 ILAMEPSILVLDEPTAGLDPLGRKELMTLFKK-LHQSGMTIVLVTHLMDDVAEYANQVYV 217
Query: 158 VAHGKL 163
+ G+L
Sbjct: 218 MEKGRL 223
>sp|Q04HV8|ECFA1_STRP2 Energy-coupling factor transporter ATP-binding protein EcfA 1
OS=Streptococcus pneumoniae serotype 2 (strain D39 /
NCTC 7466) GN=ecfA1 PE=3 SV=1
Length = 279
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 5/126 (3%)
Query: 42 FEVPIQMDVSAEKMIFGVAGIDPQRRA-ELIKVLDIDLSW---RMHKVSDGQRRRVQICM 97
FE + DV+ FGV+ D + A E + ++ ID S ++S GQ RRV I
Sbjct: 99 FEETVLKDVAFGPQNFGVSEEDAVKTAREKLALVGIDESLFDRSPFELSGGQMRRVAIAG 158
Query: 98 GLLKPFKVLLLDEITVDLDVLARADLLRFLRKECEERGATIIYATHIFDGLENWPSHIVY 157
L +L+LDE T LD L R +L+ +K + G TI+ TH+ D + + + +
Sbjct: 159 ILAMEPSILVLDEPTAGLDPLGRKELMTLFKK-LHQSGMTIVLVTHLMDDVAEYANQVYV 217
Query: 158 VAHGKL 163
+ G+L
Sbjct: 218 MEKGRL 223
>sp|Q8DG84|Y2439_THEEB Putative ABC transporter ATP-binding protein tll2439
OS=Thermosynechococcus elongatus (strain BP-1)
GN=tll2439 PE=3 SV=1
Length = 284
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 74/146 (50%), Gaps = 13/146 (8%)
Query: 32 EWRREVAFAGFEVPIQMDVSA---EKMIFGVAGI---DPQRRAELIKVLD----IDLSWR 81
+WR+ + A F+ P Q V+A E + +G+ + P+ A L + L + L+ R
Sbjct: 80 QWRQRIGLA-FQDPEQQLVAATVAEDISYGLCNLGLSPPEVAARLHQTLQEFDLVALADR 138
Query: 82 -MHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLRFLRKECEERGATIIY 140
+H +S GQ+RRV + + +LLLDE T LD R L L K ++G TI+
Sbjct: 139 PLHHLSLGQKRRVALAGVMALAPTLLLLDEPTTYLDYQQRQQLRELLEK-IHQQGTTIVI 197
Query: 141 ATHIFDGLENWPSHIVYVAHGKLQLA 166
ATH D W I+ + +G++ ++
Sbjct: 198 ATHDLDFAYGWADWIMILVNGQVSVS 223
>sp|Q6F9P2|METN2_ACIAD Methionine import ATP-binding protein MetN 2 OS=Acinetobacter sp.
(strain ADP1) GN=metN2 PE=3 SV=1
Length = 341
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 68/129 (52%), Gaps = 15/129 (11%)
Query: 40 AGFEVPIQMDVSAEKMIFGVAGIDPQRRAELIKVLD-IDLSWRMH----KVSDGQRRRVQ 94
A E+P+++ G + I+ ++R L+++LD IDL+ + ++S GQ++RV
Sbjct: 101 ANIEMPLKL--------LGYSKIEREKR--LMELLDFIDLTHKKDAFPDELSGGQKQRVG 150
Query: 95 ICMGLLKPFKVLLLDEITVDLDVLARADLLRFLRKECEERGATIIYATHIFDGLENWPSH 154
I L K+LL DE T LD +L L+K +E+G TI+ TH D +E+ H
Sbjct: 151 IARALANHPKILLCDEATSALDPQTTKSVLALLKKINKEQGITIVMVTHEMDVIESICDH 210
Query: 155 IVYVAHGKL 163
+ + G +
Sbjct: 211 VAVMESGHV 219
>sp|P36879|YADG_ECOLI Uncharacterized ABC transporter ATP-binding protein YadG
OS=Escherichia coli (strain K12) GN=yadG PE=3 SV=1
Length = 308
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 35 REVAFAGFEVPIQMDVSAEKMIFGVAGIDPQRRAE-LIKVLDI--DLSWRMHKVSDGQRR 91
+E F FE +Q V + +GV + R+E +K LD+ + R +S G +R
Sbjct: 85 QEFNFNPFET-VQQIVVNQAGYYGVERKEAYIRSEKYLKQLDLWGKRNERARMLSGGMKR 143
Query: 92 RVQICMGLLKPFKVLLLDEITVDLDVLARADLLRFLRKECEERGATIIYATHIFDGLENW 151
R+ I L+ K+L+LDE T +D+ R + FL K+ ++G TII TH + E
Sbjct: 144 RLMIARALMHEPKLLILDEPTAGVDIELRRSMWGFL-KDLNDKGTTIILTTHYLEEAEML 202
Query: 152 PSHIVYVAHGKL 163
+I + HG+L
Sbjct: 203 CRNIGIIQHGEL 214
>sp|Q6N0P7|MODC_RHOPA Molybdenum import ATP-binding protein ModC OS=Rhodopseudomonas
palustris (strain ATCC BAA-98 / CGA009) GN=modC PE=3
SV=1
Length = 373
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
Query: 69 ELIKVLDID--LSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLRF 126
E+I++L + L+ +S G+R+RV I LL K+LL+DE LD L + ++L F
Sbjct: 122 EVIELLGLAKLLARSPRNLSGGERQRVAIGRALLSQPKLLLMDEPLSALDRLTKDEILPF 181
Query: 127 LRKECEERGATIIYATHIFDGLENWPSHIVYVAHGKLQLAMPMDKVKEASKLSL 180
L + +IY +H +E H+V + GK+ P+ +++ KL L
Sbjct: 182 LERLHARLSLPVIYVSHDITEIERLADHLVLMQSGKVLAVGPLTELQSDPKLPL 235
>sp|Q6LHL2|MODC_PHOPR Molybdenum import ATP-binding protein ModC OS=Photobacterium
profundum GN=modC PE=3 SV=1
Length = 358
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 2/108 (1%)
Query: 57 FGVAGIDPQRRAELIKVLDID--LSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEITVD 114
+G DPQ +++ +L I+ L+ +S G+++RV I LL +LL+DE
Sbjct: 98 YGCDHKDPQHFNDIVTLLGIEHLLNRYPSSLSGGEKQRVAIGRALLIKPDMLLMDEPLAS 157
Query: 115 LDVLARADLLRFLRKECEERGATIIYATHIFDGLENWPSHIVYVAHGK 162
LD+ + +L+ +L +E I+Y TH D + H+V + GK
Sbjct: 158 LDLPRKQELMPYLEMLAKEVNTPIVYVTHSLDEILRLADHMVMINQGK 205
>sp|Q2SJB5|MODC_HAHCH Molybdenum import ATP-binding protein ModC OS=Hahella chejuensis
(strain KCTC 2396) GN=modC PE=3 SV=1
Length = 358
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 64/120 (53%), Gaps = 2/120 (1%)
Query: 69 ELIKVLDID--LSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLRF 126
E+I+ L+++ + +S GQR+RV I LL K+LL+DE LD+ ++ ++L +
Sbjct: 116 EVIRWLELEPLIGRNTQSLSGGQRQRVAIGRALLTSPKLLLMDEPLASLDLQSKEEILPY 175
Query: 127 LRKECEERGATIIYATHIFDGLENWPSHIVYVAHGKLQLAMPMDKVKEASKLSLMRTVES 186
L + ++ + Y +H D + SH+V + HG ++ P++++ L L E+
Sbjct: 176 LDELFQQLDIPVFYVSHSPDEVMRLASHLVLLDHGCVRAGGPINELLTRPDLPLAHLEEA 235
>sp|Q03PY6|ECFA1_LACBA Energy-coupling factor transporter ATP-binding protein EcfA 1
OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170)
GN=ecfA1 PE=3 SV=1
Length = 290
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 5/134 (3%)
Query: 42 FEVPIQMDVSAEKMIFGVAGIDPQRRA-ELIKVLDIDLSW---RMHKVSDGQRRRVQICM 97
FE ++ D++ FG+A D A E++ + +D S+ ++S GQ RRV I
Sbjct: 99 FEETVRQDIAFGPKNFGMADADALALADEMLTTVGLDQSYAERSPFELSGGQMRRVAIAG 158
Query: 98 GLLKPFKVLLLDEITVDLDVLARADLLRFLRKECEERGATIIYATHIFDGLENWPSHIVY 157
L KVL+LDE T LD R +++R + +E+G TI+ TH + + + +
Sbjct: 159 VLAMQPKVLVLDEPTAGLDPQGRQEMMRLFARLHQEQGLTIVLVTHQMEDVAQYAEQVAV 218
Query: 158 VAHGKL-QLAMPMD 170
+ G+L + P D
Sbjct: 219 MHEGRLMKFGTPAD 232
>sp|Q8T6J1|ABCA6_DICDI ABC transporter A family member 6 OS=Dictyostelium discoideum
GN=abcA6 PE=3 SV=1
Length = 1631
Score = 52.0 bits (123), Expect = 4e-06, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 61/111 (54%), Gaps = 7/111 (6%)
Query: 58 GVAGIDPQRRAELIKVLDIDLSWRMH----KVSDGQRRRVQICMGLLKPFKVLLLDEITV 113
GV G + QR AE + ++ L+ +M+ +S GQ+R++ + + + K++ LDE+T
Sbjct: 596 GVEGRNIQREAERMAT-EVGLAEKMNAPAGSLSGGQKRKLCLGIAFIGRSKIIFLDEVTS 654
Query: 114 DLDVLARADLLRFLRKECEERGATIIYATHIFDGLENWPSHIVYVAHGKLQ 164
+D ++R + FL K ++G TII TH + + I ++ GKL+
Sbjct: 655 GMDPVSRRQVWDFLLK--YKKGKTIILTTHYLEEADYLGDRIAIISQGKLR 703
Score = 35.0 bits (79), Expect = 0.55, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 86 SDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLRFLRKECEERGATIIYATHIF 145
S G +R+V + M +L V LDEI+ D + R L + + +++ +II +H
Sbjct: 1447 SGGNKRKVSLSMAMLGNPSVCFLDEISCGCDAVVRRQLWDVISELGKDK--SIILTSHSM 1504
Query: 146 DGLENWPSHIVYVAHGK 162
+E S I + GK
Sbjct: 1505 SEVEALCSRITIMKEGK 1521
>sp|A3CVD3|ECFA_METMJ Energy-coupling factor transporter ATP-binding protein EcfA
OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM
1498 / JR1) GN=ecfA PE=3 SV=1
Length = 277
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%)
Query: 83 HKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLRFLRKECEERGATIIYAT 142
H +S G+++RV I L +VL+LDE T LD ADL+ F+ + EE G T++++T
Sbjct: 136 HHLSGGEKKRVAIAGILAMEPQVLVLDEPTAGLDPQGVADLVAFVNRLPEEYGMTVVFST 195
Query: 143 HIFDGLENWPSHIVYVAHGKL 163
H D + +I + G++
Sbjct: 196 HHLDLVAEMADYIYVMDKGRV 216
>sp|Q21BF6|MODC_RHOPB Molybdenum import ATP-binding protein ModC OS=Rhodopseudomonas
palustris (strain BisB18) GN=modC PE=3 SV=1
Length = 381
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%)
Query: 85 VSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLRFLRKECEERGATIIYATHI 144
+S G+R+RV I LL K+LL+DE LD L + ++L FL + E +IY +H
Sbjct: 138 LSGGERQRVAIGRALLSQPKLLLMDEPLSALDRLTKDEILPFLERLHERLALPVIYVSHD 197
Query: 145 FDGLENWPSHIVYVAHGKLQLAMPMDKVKEASKLSLMRTVESWLRKERDEE 195
+E H+V + G++ A P+ ++ L L + ++ + E E
Sbjct: 198 MAEIERLADHLVLMRKGQVLAAGPLAALQSDPALPLAASRDAAVNFEATVE 248
>sp|Q2J1U0|MODC_RHOP2 Molybdenum import ATP-binding protein ModC OS=Rhodopseudomonas
palustris (strain HaA2) GN=modC PE=3 SV=1
Length = 377
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 61/125 (48%), Gaps = 7/125 (5%)
Query: 58 GVAGIDPQRRAELIKVLDID--LSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDL 115
G G D E+I++L + L +S G+R+RV I LL K+LL+DE L
Sbjct: 116 GAVGFD-----EVIELLGLSHLLDRAPRNLSGGERQRVAIGRALLSQPKLLLMDEPLSAL 170
Query: 116 DVLARADLLRFLRKECEERGATIIYATHIFDGLENWPSHIVYVAHGKLQLAMPMDKVKEA 175
D L + ++L FL + +IY +H +E H++ + GK+ A P+ +++
Sbjct: 171 DRLTKDEILPFLERLHARLSLPVIYVSHDITEIERLADHLILMRAGKVLAAGPLTELQSD 230
Query: 176 SKLSL 180
L L
Sbjct: 231 PALPL 235
>sp|Q0HYN8|MODC_SHESR Molybdenum import ATP-binding protein ModC OS=Shewanella sp.
(strain MR-7) GN=modC PE=3 SV=1
Length = 361
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 63/121 (52%), Gaps = 2/121 (1%)
Query: 54 KMIFGVAGIDPQRRAELIKVLDID--LSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEI 111
+ +G+ P+ +++ +L I+ LS +S G+++RV I LL ++LL+DE
Sbjct: 95 NLTYGMRHKTPELFDKVVSLLGIEKLLSRYPSTLSGGEKQRVAIGRALLTSPQMLLMDEP 154
Query: 112 TVDLDVLARADLLRFLRKECEERGATIIYATHIFDGLENWPSHIVYVAHGKLQLAMPMDK 171
LD+ + +LL +L+ +E I+Y +H D + H++ + GK+ P+ +
Sbjct: 155 LASLDLPRKRELLPYLQTLAQELKLPIVYVSHSLDEILQLADHMLVLHQGKMIAQGPLTQ 214
Query: 172 V 172
V
Sbjct: 215 V 215
>sp|D5AQY6|NIKO_RHOCB Nickel import ATP-binding protein NikO OS=Rhodobacter capsulatus
(strain ATCC BAA-309 / NBRC 16581 / SB1003) GN=nikO PE=1
SV=1
Length = 254
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 83 HKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLRFLRKECEER--GATIIY 140
H++S G+++RV + L+ +VLLLDE T LD A D+ L E R G T+I+
Sbjct: 142 HRLSGGEKKRVALASVLILDPEVLLLDEPTAALDPQATDDIAALLETEFGARNPGRTLIF 201
Query: 141 ATHIFDGLENWPSHIVYVAHGKLQLAMPMDKV 172
++H D + H+V + GK+ A P +V
Sbjct: 202 SSHDLDLVARIADHVVVLEAGKVAAAGPAAEV 233
>sp|Q71WH8|ECFA1_LISMF Energy-coupling factor transporter ATP-binding protein EcfA 1
OS=Listeria monocytogenes serotype 4b (strain F2365)
GN=ecfA1 PE=3 SV=1
Length = 288
Score = 51.2 bits (121), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 7/133 (5%)
Query: 42 FEVPIQMDVSAEKMIFGVAGIDPQRRAELIKVLDIDLSWRM-----HKVSDGQRRRVQIC 96
FE ++ D+ M FGV+ D + RA+ + + ++ L+ + ++S GQ RRV I
Sbjct: 99 FEETVEKDICFGPMNFGVSEEDAKLRAKKV-IYEVGLTEEILSRSPFELSGGQMRRVAIA 157
Query: 97 MGLLKPFKVLLLDEITVDLDVLARADLLRFLRKECEERGATIIYATHIFDGLENWPSHIV 156
L +VL+LDE T LD R +++ +E+G T + TH + + IV
Sbjct: 158 GVLAMDPEVLVLDEPTAGLDPHGREEIMEMFYNLHKEKGLTTVLVTHSMEDAARYAEKIV 217
Query: 157 YVAHGK-LQLAMP 168
+ G LQ+ P
Sbjct: 218 LMKAGTVLQIGTP 230
>sp|Q7N6R3|MODC_PHOLL Molybdenum import ATP-binding protein ModC OS=Photorhabdus
luminescens subsp. laumondii (strain TT01) GN=modC PE=3
SV=1
Length = 354
Score = 51.2 bits (121), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 71/136 (52%), Gaps = 11/136 (8%)
Query: 61 GIDPQRRAE---LIKVLDID--LSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDL 115
G+ P+ + E ++ +L I+ LS +S G+++RV I LL +LL+DE L
Sbjct: 100 GMSPEMKPEFDSIVSLLGIEHLLSRFPLTLSGGEKQRVAIGRALLTAPDLLLMDEPLASL 159
Query: 116 DVLARADLLRFLRKECEERGATIIYATHIFDGLENWPSHIVYVAHGKLQLAMPMDKVKEA 175
D+ + +LL +L K E I+Y +H D + +++ V +GK++ +++V +
Sbjct: 160 DLPRKRELLPYLEKLSGEVNIPILYVSHNLDEILRLAENVLVVDNGKVRATGKLEEVWSS 219
Query: 176 SKLSLMRTVESWLRKE 191
S L L WL+KE
Sbjct: 220 SALRL------WLQKE 229
>sp|Q035B3|ECFA2_LACC3 Energy-coupling factor transporter ATP-binding protein EcfA2
OS=Lactobacillus casei (strain ATCC 334) GN=ecfA2 PE=1
SV=1
Length = 288
Score = 51.2 bits (121), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 4/126 (3%)
Query: 42 FEVPIQMDVSAEKMIFGVAGIDPQRRAE-LIKVLDID---LSWRMHKVSDGQRRRVQICM 97
FE + D++ FGV+ D A+ ++K++ + L +S GQ RRV I
Sbjct: 99 FEQTVAKDIAFGPQNFGVSEKDALALADKMVKMVGLPHDVLEKSPFDLSGGQMRRVAIAG 158
Query: 98 GLLKPFKVLLLDEITVDLDVLARADLLRFLRKECEERGATIIYATHIFDGLENWPSHIVY 157
L +VL+LDE T LD R ++++ + E+G TI+ TH D + ++ +
Sbjct: 159 VLAMQPEVLVLDEPTAGLDPSGRHEMMQMFEQLHREQGQTIVLVTHQMDDVADYADTVWV 218
Query: 158 VAHGKL 163
+A GKL
Sbjct: 219 MAEGKL 224
>sp|Q8Y455|ECFA1_LISMO Energy-coupling factor transporter ATP-binding protein EcfA 1
OS=Listeria monocytogenes serovar 1/2a (strain ATCC
BAA-679 / EGD-e) GN=ecfA1 PE=3 SV=1
Length = 288
Score = 51.2 bits (121), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 7/133 (5%)
Query: 42 FEVPIQMDVSAEKMIFGVAGIDPQRRAELIKVLDIDLSWRM-----HKVSDGQRRRVQIC 96
FE ++ D+ M FGV+ D + RA+ + + ++ L+ + ++S GQ RRV I
Sbjct: 99 FEETVEKDICFGPMNFGVSEEDAKLRAKKV-IYEVGLTEEILSRSPFELSGGQMRRVAIA 157
Query: 97 MGLLKPFKVLLLDEITVDLDVLARADLLRFLRKECEERGATIIYATHIFDGLENWPSHIV 156
L +VL+LDE T LD R +++ +E+G T + TH + + IV
Sbjct: 158 GVLAMDPEVLVLDEPTAGLDPHGREEIMEMFYNLHKEKGLTTVLVTHSMEDAARYAEKIV 217
Query: 157 YVAHGK-LQLAMP 168
+ G LQ+ P
Sbjct: 218 LMKAGTVLQIGTP 230
>sp|Q1WSB9|ECFA1_LACS1 Energy-coupling factor transporter ATP-binding protein EcfA 1
OS=Lactobacillus salivarius (strain UCC118) GN=ecfA1
PE=3 SV=1
Length = 289
Score = 51.2 bits (121), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 31 GEWRREVAFAG-------FEVPIQMDVSAEKMIFGVAGIDPQR----RAELIKVLDIDLS 79
G+ R+EV F FE + D++ FG + + ++ +A+L+ + + L
Sbjct: 81 GKLRKEVGFVFQFPEAQLFEETVLKDIAFAPKNFGKSEDEAEKIAREKAKLVALPEEVLE 140
Query: 80 WRMHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLRFLRKECEERGATII 139
++S GQ RRV I L KVL+LDE T LD R ++ + ++ TII
Sbjct: 141 KSPFELSGGQMRRVAIAGILAMEPKVLVLDEPTAGLDPEGRHQMMEMFNRLHKDENLTII 200
Query: 140 YATHIFDGLENWPSHIVYVAHGKL 163
TH + + + H++ + GK+
Sbjct: 201 LVTHQMNDVAEYADHVIVLESGKV 224
>sp|Q31VE6|NIKE_SHIBS Nickel import ATP-binding protein NikE OS=Shigella boydii serotype
4 (strain Sb227) GN=nikE PE=3 SV=1
Length = 268
Score = 51.2 bits (121), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Query: 66 RRAELIKVLDID---LSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARAD 122
R +E++K +D+D L R ++S GQ +RV + L K+L+LDE +LD++ +A
Sbjct: 130 RASEMLKAVDLDDSVLDKRPPQLSGGQLQRVCLARALAVEPKLLILDETVSNLDLVLQAG 189
Query: 123 LLRFLRKECEERGATIIYATHIFDGLENWPSHIVYVAHGKL 163
++R L+K ++ G ++ TH +E + ++ + +G++
Sbjct: 190 VIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQI 230
>sp|Q97JB8|Y1368_CLOAB Putative ABC transporter ATP-binding protein CA_C1368
OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792
/ JCM 1419 / LMG 5710 / VKM B-1787) GN=CA_C1368 PE=3
SV=1
Length = 279
Score = 51.2 bits (121), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%)
Query: 83 HKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLRFLRKECEERGATIIYAT 142
H +S GQ++R+ + L +VL+LDE TV LD L++ L+K EE TI+++T
Sbjct: 137 HNLSGGQKKRIALASVLAMKPEVLVLDEPTVSLDPRGTIKLVKLLKKINEEMKITIVFST 196
Query: 143 HIFDGLENWPSHIVYVAHGKLQL 165
H D + + + + GKL L
Sbjct: 197 HDMDIVPLFADKVYVLNEGKLIL 219
>sp|O34756|YJKB_BACSU Putative ABC transporter ATP-binding protein YjkB OS=Bacillus
subtilis (strain 168) GN=yjkB PE=3 SV=1
Length = 250
Score = 51.2 bits (121), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 22/180 (12%)
Query: 6 MVKVLGRSAFHDTALTS---------SGDLSYLG--------GEWRREVAFAGFEVPI-- 46
+V VLG S + L S SG+++ G E RR A A P+
Sbjct: 44 IVAVLGPSGSGKSTLLSMCNLMRTPDSGEVNIYGKEVREWNVNELRRTAALAFQSAPVLD 103
Query: 47 ---QMDVSAEKMIFGVAGIDPQRRAELIKVLDIDLSWRMHKVSDGQRRRVQICMGLLKPF 103
+ ++S + + P++ A L + L +S GQR+R+ + L P
Sbjct: 104 GTVRDNLSLVQRLHQSQLYSPEKLASLAGLPPELLDRSARDLSGGQRQRLSLARTLSNPS 163
Query: 104 KVLLLDEITVDLDVLARADLLRFLRKECEERGATIIYATHIFDGLENWPSHIVYVAHGKL 163
+LLLDEIT LD ++ ++ ++++ +E+ T+++ TH + + I ++A G+L
Sbjct: 164 SILLLDEITSALDPVSALEIEELIKRQHQEKKWTVMWVTHNMEQAKRIADTIWFMADGRL 223
>sp|Q1J450|ECFA2_STRPF Energy-coupling factor transporter ATP-binding protein EcfA 2
OS=Streptococcus pyogenes serotype M4 (strain MGAS10750)
GN=ecfA2 PE=3 SV=1
Length = 280
Score = 51.2 bits (121), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 62/129 (48%), Gaps = 5/129 (3%)
Query: 42 FEVPIQMDVSAEKMIFGVAGIDPQRRA----ELIKVLDIDLSWRMHKVSDGQRRRVQICM 97
FE + DV+ FGV+ + + A L+ + + ++S GQ RRV I
Sbjct: 99 FEETVLKDVAFGPQNFGVSPEEAEALAREKLALVGISENLFEKNPFELSGGQMRRVAIAG 158
Query: 98 GLLKPFKVLLLDEITVDLDVLARADLLRFLRKECEERGATIIYATHIFDGLENWPSHIVY 157
L KVL+LDE T LD R +L+ +K + G TI+ TH+ D + N+ +
Sbjct: 159 ILAMQPKVLVLDEPTAGLDPKGRKELMTIFKK-LHQSGMTIVLVTHLMDDVANYADFVYV 217
Query: 158 VAHGKLQLA 166
+ GK+ L+
Sbjct: 218 LDKGKIILS 226
>sp|Q1JEC9|ECFA2_STRPD Energy-coupling factor transporter ATP-binding protein EcfA 2
OS=Streptococcus pyogenes serotype M2 (strain MGAS10270)
GN=ecfA2 PE=3 SV=1
Length = 280
Score = 51.2 bits (121), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 62/129 (48%), Gaps = 5/129 (3%)
Query: 42 FEVPIQMDVSAEKMIFGVAGIDPQRRA----ELIKVLDIDLSWRMHKVSDGQRRRVQICM 97
FE + DV+ FGV+ + + A L+ + + ++S GQ RRV I
Sbjct: 99 FEETVLKDVAFGPQNFGVSPEEAEALAREKLALVGISENLFEKNPFELSGGQMRRVAIAG 158
Query: 98 GLLKPFKVLLLDEITVDLDVLARADLLRFLRKECEERGATIIYATHIFDGLENWPSHIVY 157
L KVL+LDE T LD R +L+ +K + G TI+ TH+ D + N+ +
Sbjct: 159 ILAMQPKVLVLDEPTAGLDPKGRKELMTIFKK-LHQSGMTIVLVTHLMDDVANYADFVYV 217
Query: 158 VAHGKLQLA 166
+ GK+ L+
Sbjct: 218 LDKGKIILS 226
>sp|Q1JJD0|ECFA2_STRPC Energy-coupling factor transporter ATP-binding protein EcfA 2
OS=Streptococcus pyogenes serotype M12 (strain MGAS9429)
GN=ecfA2 PE=3 SV=1
Length = 280
Score = 51.2 bits (121), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 62/129 (48%), Gaps = 5/129 (3%)
Query: 42 FEVPIQMDVSAEKMIFGVAGIDPQRRA----ELIKVLDIDLSWRMHKVSDGQRRRVQICM 97
FE + DV+ FGV+ + + A L+ + + ++S GQ RRV I
Sbjct: 99 FEETVLKDVAFGPQNFGVSPEEAEALAREKLALVGISENLFEKNPFELSGGQMRRVAIAG 158
Query: 98 GLLKPFKVLLLDEITVDLDVLARADLLRFLRKECEERGATIIYATHIFDGLENWPSHIVY 157
L KVL+LDE T LD R +L+ +K + G TI+ TH+ D + N+ +
Sbjct: 159 ILAMQPKVLVLDEPTAGLDPKGRKELMTIFKK-LHQSGMTIVLVTHLMDDVANYADFVYV 217
Query: 158 VAHGKLQLA 166
+ GK+ L+
Sbjct: 218 LDKGKIILS 226
>sp|Q1J983|ECFA2_STRPB Energy-coupling factor transporter ATP-binding protein EcfA 2
OS=Streptococcus pyogenes serotype M12 (strain MGAS2096)
GN=ecfA2 PE=3 SV=1
Length = 280
Score = 51.2 bits (121), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 62/129 (48%), Gaps = 5/129 (3%)
Query: 42 FEVPIQMDVSAEKMIFGVAGIDPQRRA----ELIKVLDIDLSWRMHKVSDGQRRRVQICM 97
FE + DV+ FGV+ + + A L+ + + ++S GQ RRV I
Sbjct: 99 FEETVLKDVAFGPQNFGVSPEEAEALAREKLALVGISENLFEKNPFELSGGQMRRVAIAG 158
Query: 98 GLLKPFKVLLLDEITVDLDVLARADLLRFLRKECEERGATIIYATHIFDGLENWPSHIVY 157
L KVL+LDE T LD R +L+ +K + G TI+ TH+ D + N+ +
Sbjct: 159 ILAMQPKVLVLDEPTAGLDPKGRKELMTIFKK-LHQSGMTIVLVTHLMDDVANYADFVYV 217
Query: 158 VAHGKLQLA 166
+ GK+ L+
Sbjct: 218 LDKGKIILS 226
>sp|A2RH10|ECFA1_STRPG Energy-coupling factor transporter ATP-binding protein EcfA 1
OS=Streptococcus pyogenes serotype M5 (strain Manfredo)
GN=ecfA1 PE=3 SV=1
Length = 280
Score = 51.2 bits (121), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 62/129 (48%), Gaps = 5/129 (3%)
Query: 42 FEVPIQMDVSAEKMIFGVAGIDPQRRA----ELIKVLDIDLSWRMHKVSDGQRRRVQICM 97
FE + DV+ FGV+ + + A L+ + + ++S GQ RRV I
Sbjct: 99 FEETVLKDVAFGPQNFGVSPEEAEALAREKLALVGISENLFEKNPFELSGGQMRRVAIAG 158
Query: 98 GLLKPFKVLLLDEITVDLDVLARADLLRFLRKECEERGATIIYATHIFDGLENWPSHIVY 157
L KVL+LDE T LD R +L+ +K + G TI+ TH+ D + N+ +
Sbjct: 159 ILAMQPKVLVLDEPTAGLDPKGRKELMTIFKK-LHQSGMTIVLVTHLMDDVANYADFVYV 217
Query: 158 VAHGKLQLA 166
+ GK+ L+
Sbjct: 218 LDKGKIILS 226
>sp|Q7CMM8|ECFA1_STRP8 Energy-coupling factor transporter ATP-binding protein EcfA 1
OS=Streptococcus pyogenes serotype M18 (strain MGAS8232)
GN=ecfA1 PE=3 SV=1
Length = 280
Score = 51.2 bits (121), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 62/129 (48%), Gaps = 5/129 (3%)
Query: 42 FEVPIQMDVSAEKMIFGVAGIDPQRRA----ELIKVLDIDLSWRMHKVSDGQRRRVQICM 97
FE + DV+ FGV+ + + A L+ + + ++S GQ RRV I
Sbjct: 99 FEETVLKDVAFGPQNFGVSPEEAEALAREKLALVGISENLFEKNPFELSGGQMRRVAIAG 158
Query: 98 GLLKPFKVLLLDEITVDLDVLARADLLRFLRKECEERGATIIYATHIFDGLENWPSHIVY 157
L KVL+LDE T LD R +L+ +K + G TI+ TH+ D + N+ +
Sbjct: 159 ILAMQPKVLVLDEPTAGLDPKGRKELMTIFKK-LHQSGMTIVLVTHLMDDVANYADFVYV 217
Query: 158 VAHGKLQLA 166
+ GK+ L+
Sbjct: 218 LDKGKIILS 226
>sp|Q5X9B6|ECFA1_STRP6 Energy-coupling factor transporter ATP-binding protein EcfA 1
OS=Streptococcus pyogenes serotype M6 (strain ATCC
BAA-946 / MGAS10394) GN=ecfA1 PE=3 SV=1
Length = 280
Score = 51.2 bits (121), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 62/129 (48%), Gaps = 5/129 (3%)
Query: 42 FEVPIQMDVSAEKMIFGVAGIDPQRRA----ELIKVLDIDLSWRMHKVSDGQRRRVQICM 97
FE + DV+ FGV+ + + A L+ + + ++S GQ RRV I
Sbjct: 99 FEETVLKDVAFGPQNFGVSPEEAEALAREKLALVGISENLFEKNPFELSGGQMRRVAIAG 158
Query: 98 GLLKPFKVLLLDEITVDLDVLARADLLRFLRKECEERGATIIYATHIFDGLENWPSHIVY 157
L KVL+LDE T LD R +L+ +K + G TI+ TH+ D + N+ +
Sbjct: 159 ILAMQPKVLVLDEPTAGLDPKGRKELMTIFKK-LHQSGMTIVLVTHLMDDVANYADFVYV 217
Query: 158 VAHGKLQLA 166
+ GK+ L+
Sbjct: 218 LDKGKIILS 226
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,096,068
Number of Sequences: 539616
Number of extensions: 3718532
Number of successful extensions: 17818
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 2063
Number of HSP's successfully gapped in prelim test: 589
Number of HSP's that attempted gapping in prelim test: 15178
Number of HSP's gapped (non-prelim): 3105
length of query: 259
length of database: 191,569,459
effective HSP length: 115
effective length of query: 144
effective length of database: 129,513,619
effective search space: 18649961136
effective search space used: 18649961136
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)