Citrus Sinensis ID: 024994

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------26
Protein Sequence
MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVTVNVNGLRSTGN
Secondary Structure (PSIPRED)
cEEEEcccccHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHHHHHcccccEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccccccccccccccccHHHHHHHHHcccccccccHHHHHHHHHHHcccccccccccEEEEcccEEEEEcccccccccc
Secondary Structure Prediction (SSPRO)
cEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHHHHHccccccEEEEcccccccccHHHccHHHHHHHHHHHcHHHHHHHHHHHHHHHHcccEEEEEEccHHHcccccccHHHHHHHHHHHHHHHHHHHHcHHHcEEEEEEEEccEccHHHHHHcccHHHHHHHHHHHHcccccccEcHHHHHHHHHHHHcHHHccccccEEEEcccHcccccEcccccccc
Coil and Loop (DISEMBL)
mtalvtggtrgigHATVEELARFGAIVHTCSRNQIELDARLHEWKnkgfkvtgsvcdlssREQREKLIETVTSIFQGKLNILINNAaiafvkptvditaedmstvsstnfeSVFHLSQLAhplfkasgngSIVFISsvggvrgipsvsLYGAYKGAMNQLTKNLACEwakdnirtntvapwviktsmikpfeegpegsefldgiarqtpigragepdevSSLVAFLClpaasyitgqiicVDGGVTVTVNVNGLRSTGN
Flexible Loop (DISEMBL)
mtalvtggtrgighaTVEELARFGAIVHTCSRNQIELDARLHEwknkgfkvtgsvcdlssREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVTVNVNGLRSTGN
Low Complexity Region (SEG)
MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVDggvtvtvnvngLRSTGN
Disordered region (IsUnstruct)
*****TGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF***************************VSSLVAFLCLPAASYITGQIICVDGGVTVTVNVNG******
Disordered Region (DISOPRED)
MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVTVNV*GL*****
Disordered Region (DISEMBL)
MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVTVNVNGLRSTGN
Disordered Region (DISPRO)
MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVTVNVNGL*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhoooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVTVNVNGLRSTGN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	259	2.2.26 [Sep-21-2011]
P50165	268	Tropinone reductase homol	N/A	no	0.953	0.921	0.619	6e-85
Q9ASX2	266	Tropinone reductase homol	no	no	0.934	0.909	0.621	8e-84
P50162	273	Tropinone reductase 1 OS=	N/A	no	0.945	0.897	0.585	9e-82
P50164	260	Tropinone reductase 2 OS=	N/A	no	0.938	0.934	0.584	2e-78
P50163	260	Tropinone reductase 2 OS=	N/A	no	0.942	0.938	0.577	1e-77
Q8SPU8	279	Dehydrogenase/reductase S	yes	no	0.918	0.853	0.382	1e-35
Q9GKX2	260	Dehydrogenase/reductase S	yes	no	0.918	0.915	0.362	2e-33
Q5RCF8	278	Dehydrogenase/reductase S	yes	no	0.918	0.856	0.370	3e-33
Q9BTZ2	278	Dehydrogenase/reductase S	yes	no	0.918	0.856	0.370	3e-33
Q99LB2	279	Dehydrogenase/reductase S	yes	no	0.918	0.853	0.382	4e-33

>sp|P50165|TRNH_DATST Tropinone reductase homolog OS=Datura stramonium PE=2 SV=1

 Score =  313 bits (803), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 153/247 (61%), Positives = 186/247 (75%)

Query: 1   MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
           MTALVTGGTRGIG+A VEELA FGA V+TCSR+Q +LD  L +W+ KGFKV+G VCD+SS
Sbjct: 18  MTALVTGGTRGIGYAIVEELANFGAEVYTCSRSQNDLDECLEKWRRKGFKVSGPVCDVSS 77

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
             QR+ L+E+VTS F GKLNILINNA     K   + TAED S +  TNFE+ ++L QLA
Sbjct: 78  ISQRQTLMESVTSSFNGKLNILINNAGTTIPKEATNFTAEDYSIIMGTNFEASYNLCQLA 137

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
           HPL KASGN SIVF SS  GV  +P  S+Y A KGA+NQ+TK+LACEWAKD+IR N VAP
Sbjct: 138 HPLLKASGNASIVFNSSAAGVIAVPLSSIYAASKGAINQVTKSLACEWAKDSIRVNAVAP 197

Query: 181 WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
           W+I T +I+   + P   + ++ +  + P+ RAGEP EVSSLV +LCLP ASYITGQIIC
Sbjct: 198 WIINTPIIEAACQVPSQKKNIESLIGRAPMKRAGEPSEVSSLVTYLCLPTASYITGQIIC 257

Query: 241 VDGGVTV 247
           VDGG TV
Sbjct: 258 VDGGYTV 264

Datura stramonium (taxid: 4076)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: -

>sp|Q9ASX2|TRNH1_ARATH Tropinone reductase homolog At1g07440 OS=Arabidopsis thaliana GN=At1g07440 PE=1 SV=1

 Score =  310 bits (793), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 153/246 (62%), Positives = 183/246 (74%), Gaps = 4/246 (1%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           T LVTGGT+GIGHA VEE A FGA++HTC+RN+ EL+  L +W+ KGF+VTGSVCD S R
Sbjct: 16  TVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLR 75

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
            +REKL++TV+S+F GKL+ILINN      KPT+D TAED S   STN ES +HLSQLAH
Sbjct: 76  PEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAH 135

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           PL KASG G+I+F+SS+ GV      S+Y A KGA+NQL +NLACEWA D IR N VAP 
Sbjct: 136 PLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPA 195

Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
           VI T    P  E     EF   +  + P+GR GEP+EVSSLVAFLC+PAASYITGQ ICV
Sbjct: 196 VIAT----PLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYITGQTICV 251

Query: 242 DGGVTV 247
           DGG+TV
Sbjct: 252 DGGLTV 257

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|P50162|TRN1_DATST Tropinone reductase 1 OS=Datura stramonium GN=TR1 PE=1 SV=1

 Score =  303 bits (775), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 144/246 (58%), Positives = 185/246 (75%), Gaps = 1/246 (0%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           TALVTGG++GIG+A VEELA  GA V+TCSRN+ ELD  L  W+ KG  V GSVCDL SR
Sbjct: 23  TALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSR 82

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
            +R+KL++TV  +F GKLNIL+NNA +   K   D T +D + +  TNFE+ +HLSQ+A+
Sbjct: 83  TERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAY 142

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           PL KAS NG+++F+SS+ G   +PSVSLY A KGA+NQ+TK+LACEWAKDNIR N+VAP 
Sbjct: 143 PLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPG 202

Query: 182 VIKTSMIK-PFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
           VI T +++   ++ P   E +D    +TP+GRAG+P EVS+L+AFLC PAASYITGQII 
Sbjct: 203 VILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASYITGQIIW 262

Query: 241 VDGGVT 246
            DGG T
Sbjct: 263 ADGGFT 268

Catalyzes the stereospecific reduction of tropinone to tropine.

Datura stramonium (taxid: 4076)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 0

EC: 6

>sp|P50164|TRN2_HYONI Tropinone reductase 2 OS=Hyoscyamus niger GN=TR2 PE=2 SV=1

 Score =  291 bits (746), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 142/243 (58%), Positives = 177/243 (72%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           TALVTGG+RGIG+  VEELA  GA V+TCSRNQ ELD  L +W++KGF V  SVCDLSSR
Sbjct: 11  TALVTGGSRGIGYGIVEELANLGASVYTCSRNQKELDECLTQWRSKGFNVEASVCDLSSR 70

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
            +RE+ ++TV++ F GKLNIL+NNA I   K   D T ED S + S NFE+ +HLS LAH
Sbjct: 71  SEREEFMKTVSNHFHGKLNILVNNAGIVIYKEAKDYTMEDYSHIMSINFEAAYHLSVLAH 130

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P  KAS  G++VFISS+ G   +P  ++YGA KGAM+QLT+ LA EWAKDNIR N V P 
Sbjct: 131 PFLKASERGNVVFISSISGASALPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPG 190

Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
           VI TSM++   + PE  E LD +  +  + R GEP E++++VAFLC PAASY+TGQII V
Sbjct: 191 VIATSMVEMTIQDPEQKENLDKLIDRCALRRMGEPKELAAVVAFLCFPAASYVTGQIIYV 250

Query: 242 DGG 244
           DGG
Sbjct: 251 DGG 253

Catalyzes the stereospecific reduction of tropinone to pseudotropine.

Hyoscyamus niger (taxid: 4079)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 3

EC: 6

>sp|P50163|TRN2_DATST Tropinone reductase 2 OS=Datura stramonium GN=TR2 PE=1 SV=1

 Score =  289 bits (740), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 141/244 (57%), Positives = 178/244 (72%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           TALVTGG+RGIG+  VEELA  GA V+TCSRNQ EL+  L +W++KGFKV  SVCDLSSR
Sbjct: 11  TALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSR 70

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
            +R++L+ TV + F GKLNIL+NNA I   K   D T ED S + S NFE+ +HLS LAH
Sbjct: 71  SERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAH 130

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P  KAS  G++VFISSV G   +P  ++YGA KGAM+QLT+ LA EWAKDNIR N V P 
Sbjct: 131 PFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPG 190

Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
           VI TS+++   + PE  E L+ +  +  + R GEP E++++VAFLC PAASY+TGQII V
Sbjct: 191 VIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYVTGQIIYV 250

Query: 242 DGGV 245
           DGG+
Sbjct: 251 DGGL 254

Catalyzes the stereospecific reduction of tropinone to pseudotropine.

Datura stramonium (taxid: 4076)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 3

EC: 6

>sp|Q8SPU8|DHRS4_BOVIN Dehydrogenase/reductase SDR family member 4 OS=Bos taurus GN=DHRS4 PE=2 SV=2

 Score =  149 bits (377), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/243 (38%), Positives = 131/243 (53%), Gaps = 5/243 (2%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           ALVT  T GIG A    LA+ GA V   SR Q  +D  +   K +G  VTG+VC +   E
Sbjct: 36  ALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDRAVATLKGEGLSVTGTVCHVGKAE 95

Query: 63  QREKLIETVTSIFQGKLNILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
            RE+L+ T   +  G ++ILI+NAA++ F    +D+  E    +   N ++   L++   
Sbjct: 96  DRERLVATAVKL-HGGVDILISNAAVSPFFGSLMDVPEEVWDKILDVNVKATALLTKAVV 154

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P     G GSIV +SS+      PS+  Y   K A+  LTKNLA E A+ N+R N +AP 
Sbjct: 155 PEMAKRGGGSIVIVSSIAAYSPFPSLGPYNVSKTALLGLTKNLALELAESNVRVNCLAPG 214

Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
           +I+TS  +   E P   E    I     I R G+P+E + +V+FLC   ASYITG+ + V
Sbjct: 215 LIRTSFSRVLWEDPARQE---SIKATFQIKRIGKPEECAGIVSFLCSEDASYITGETVVV 271

Query: 242 DGG 244
            GG
Sbjct: 272 AGG 274

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

>sp|Q9GKX2|DHRS4_RABIT Dehydrogenase/reductase SDR family member 4 (Fragment) OS=Oryctolagus cuniculus GN=DHRS4 PE=1 SV=1

 Score =  142 bits (358), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/243 (36%), Positives = 132/243 (54%), Gaps = 5/243 (2%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           A+VT  T GIG A    LA+ GA V   SR Q  +D  +   + +G  VTG+VC +   E
Sbjct: 17  AIVTASTDGIGLAIARRLAQDGAHVVISSRKQQNVDRAVAALQAEGLSVTGTVCHVGKAE 76

Query: 63  QREKLIETVTSIFQGKLNILINNAAI-AFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
            RE+L+ T  ++  G ++IL++NAA+  F    +D+T E    +   N +++  +++   
Sbjct: 77  DRERLVATALNL-HGGIDILVSNAAVNPFFGKLMDVTEEVWDKILDINVKAMALMTKAVV 135

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P  +  G GS+V ++S+        +  Y   K A+  LTKNLA E A  NIR N +AP 
Sbjct: 136 PEMEKRGGGSVVIVASIAAFNPFSGLGPYNVSKTALVGLTKNLALELAAQNIRVNCLAPG 195

Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
           +IKTS  K   E     E    I ++  I R G+P+E + +V+FLC   ASYITG+ + V
Sbjct: 196 LIKTSFSKALWEDKAQEE---NIIQKLRIRRLGKPEECAGIVSFLCSEDASYITGETVVV 252

Query: 242 DGG 244
            GG
Sbjct: 253 AGG 255

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.

Oryctolagus cuniculus (taxid: 9986)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

>sp|Q5RCF8|DHRS4_PONAB Dehydrogenase/reductase SDR family member 4 OS=Pongo abelii GN=DHRS4 PE=2 SV=3

 Score =  142 bits (357), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 90/243 (37%), Positives = 128/243 (52%), Gaps = 5/243 (2%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           ALVT  T GIG A    LA+ GA V   SR Q  +D  +   + +G  VTG+VC +   E
Sbjct: 35  ALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVTGTVCHVGKAE 94

Query: 63  QREKLIETVTSIFQGKLNILINNAAI-AFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
            RE+L+ T   +  G ++IL++NAA+  F    +D+T E        N ++   +++   
Sbjct: 95  DRERLVATAVKL-HGGIDILVSNAAVNPFFGSLMDVTEEVWDKTLDINVKAPALMTKAVV 153

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P  +  G GS+V +SS+      P  S Y   K A+  LTK LA E A  NIR N +AP 
Sbjct: 154 PEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIELAPRNIRVNCLAPG 213

Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
           +IKTS  +      E  E +    R   I R GEP++ + +V+FLC   ASYITG+ + V
Sbjct: 214 LIKTSFSRMLWMDKEKEESMKETLR---IRRLGEPEDCAGIVSFLCSEDASYITGETVVV 270

Query: 242 DGG 244
            GG
Sbjct: 271 GGG 273

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

>sp|Q9BTZ2|DHRS4_HUMAN Dehydrogenase/reductase SDR family member 4 OS=Homo sapiens GN=DHRS4 PE=1 SV=3

 Score =  142 bits (357), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 90/243 (37%), Positives = 128/243 (52%), Gaps = 5/243 (2%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           ALVT  T GIG A    LA+ GA V   SR Q  +D  +   + +G  VTG+VC +   E
Sbjct: 35  ALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVTGTVCHVGKAE 94

Query: 63  QREKLIETVTSIFQGKLNILINNAAI-AFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
            RE+L+ T   +  G ++IL++NAA+  F    +D+T E        N ++   +++   
Sbjct: 95  DRERLVATAVKL-HGGIDILVSNAAVNPFFGSIMDVTEEVWDKTLDINVKAPALMTKAVV 153

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P  +  G GS+V +SS+      P  S Y   K A+  LTK LA E A  NIR N +AP 
Sbjct: 154 PEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIELAPRNIRVNCLAPG 213

Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
           +IKTS  +      E  E +    R   I R GEP++ + +V+FLC   ASYITG+ + V
Sbjct: 214 LIKTSFSRMLWMDKEKEESMKETLR---IRRLGEPEDCAGIVSFLCSEDASYITGETVVV 270

Query: 242 DGG 244
            GG
Sbjct: 271 GGG 273

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

>sp|Q99LB2|DHRS4_MOUSE Dehydrogenase/reductase SDR family member 4 OS=Mus musculus GN=Dhrs4 PE=2 SV=3

 Score =  141 bits (356), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 93/243 (38%), Positives = 124/243 (51%), Gaps = 5/243 (2%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           ALVT  T GIG A    LA  GA V   SR Q  +D  +   + +G  VTG VC +   E
Sbjct: 36  ALVTASTDGIGFAIARRLAEDGAHVVVSSRKQQNVDRAVATLQGEGLSVTGIVCHVGKAE 95

Query: 63  QREKLIETVTSIFQGKLNILINNAAI-AFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
            REKLI T     QG ++IL++NAA+  F    +D+T E    V S N  +   + +   
Sbjct: 96  DREKLITTALKRHQG-IDILVSNAAVNPFFGNLMDVTEEVWDKVLSINVTATAMMIKAVV 154

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P  +  G GS+V + SV G    PS+  Y   K A+  LTKN A E A  NIR N +AP 
Sbjct: 155 PEMEKRGGGSVVIVGSVAGFTRFPSLGPYNVSKTALLGLTKNFAAELAPKNIRVNCLAPG 214

Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
           +IKT       E     +F   I     I R G+P++ + +V+FLC   ASYI G+ + V
Sbjct: 215 LIKTRFSSVLWEEKAREDF---IKEAMQIRRLGKPEDCAGIVSFLCSEDASYINGETVVV 271

Query: 242 DGG 244
            GG
Sbjct: 272 GGG 274

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	259
225440460	267	PREDICTED: tropinone reductase homolog [	0.957	0.928	0.673	6e-96
297740326	277	unnamed protein product [Vitis vinifera]	0.953	0.891	0.680	6e-95
225440458	325	PREDICTED: tropinone reductase 1-like [V	0.953	0.76	0.680	7e-95
297746018	252	unnamed protein product [Vitis vinifera]	0.942	0.968	0.684	3e-94
297746010	270	unnamed protein product [Vitis vinifera]	0.942	0.903	0.680	4e-94
359478910	270	PREDICTED: tropinone reductase homolog A	0.961	0.922	0.660	6e-94
147769646	270	hypothetical protein VITISV_035429 [Viti	0.942	0.903	0.680	1e-93
147838761	270	hypothetical protein VITISV_016037 [Viti	0.942	0.903	0.680	2e-93
359478613	539	PREDICTED: LOW QUALITY PROTEIN: uncharac	0.942	0.452	0.680	2e-93
297740327	250	unnamed protein product [Vitis vinifera]	0.945	0.98	0.670	4e-93

>gi|225440460|ref|XP_002271837.1| PREDICTED: tropinone reductase homolog [Vitis vinifera] gi|297740324|emb|CBI30506.3| unnamed protein product [Vitis vinifera]

 Score =  356 bits (913), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 167/248 (67%), Positives = 195/248 (78%)

Query: 1   MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
           MTALVTGG+RGIGHA VEELA FGA VHTCSRNQ ELD RL EWKNKGFKV+ S+CD+SS
Sbjct: 18  MTALVTGGSRGIGHAIVEELAAFGATVHTCSRNQEELDQRLQEWKNKGFKVSASLCDVSS 77

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
           R QR +L+ETV+SIF GKL+IL+NNA    +K   + TAED ST+  TNFES +HL QL 
Sbjct: 78  RSQRTQLMETVSSIFDGKLSILVNNAGTIILKEATECTAEDFSTIMGTNFESAYHLCQLG 137

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
           HPL KASGNGSIVFISS+ G+   P+ S+Y A KGAMNQ+TKNLACEWAKD IR NT+AP
Sbjct: 138 HPLLKASGNGSIVFISSISGLLAFPASSIYAASKGAMNQVTKNLACEWAKDGIRVNTIAP 197

Query: 181 WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
           W+IKTS++   ++ P   E +  +  +TPI R GEPDEVS LVAFLC P ASYITGQ+IC
Sbjct: 198 WIIKTSLLHVIDDHPNIKENMSRLISRTPISRPGEPDEVSPLVAFLCFPVASYITGQVIC 257

Query: 241 VDGGVTVT 248
           VDGG  VT
Sbjct: 258 VDGGYKVT 265

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297740326|emb|CBI30508.3| unnamed protein product [Vitis vinifera]

 Score =  352 bits (904), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 168/247 (68%), Positives = 196/247 (79%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           TALVTGGTRGIGHA VEELA FGA VHTCSRNQ ELD  L  WK+KGFKV+GSVCD+SSR
Sbjct: 14  TALVTGGTRGIGHAIVEELAAFGATVHTCSRNQKELDEMLQVWKSKGFKVSGSVCDVSSR 73

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
            QR +L++TV+S+F GKLNIL+NNA     K T + T ED+S +  TNFES +HLSQL +
Sbjct: 74  PQRTQLMDTVSSLFDGKLNILVNNAGTVISKRTEEYTVEDVSIIMGTNFESAYHLSQLGY 133

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           PL KASG GSIVFISSV GV  +P +S+Y A KGAMNQ+T+NLACEWA+DNIR NT+APW
Sbjct: 134 PLLKASGRGSIVFISSVAGVMALPVISIYAASKGAMNQVTRNLACEWAEDNIRVNTIAPW 193

Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
           VI TS+I   ++ P   E +  I  +TPI R GEPDEVSSLVAFLC PAASYITGQ+ICV
Sbjct: 194 VINTSLIHKAKDDPSSEEKIKRIISRTPICRMGEPDEVSSLVAFLCFPAASYITGQVICV 253

Query: 242 DGGVTVT 248
           DGG +VT
Sbjct: 254 DGGYSVT 260

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225440458|ref|XP_002271432.1| PREDICTED: tropinone reductase 1-like [Vitis vinifera]

 Score =  352 bits (904), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 168/247 (68%), Positives = 196/247 (79%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           TALVTGGTRGIGHA VEELA FGA VHTCSRNQ ELD  L  WK+KGFKV+GSVCD+SSR
Sbjct: 21  TALVTGGTRGIGHAIVEELAAFGATVHTCSRNQKELDEMLQVWKSKGFKVSGSVCDVSSR 80

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
            QR +L++TV+S+F GKLNIL+NNA     K T + T ED+S +  TNFES +HLSQL +
Sbjct: 81  PQRTQLMDTVSSLFDGKLNILVNNAGTVISKRTEEYTVEDVSIIMGTNFESAYHLSQLGY 140

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           PL KASG GSIVFISSV GV  +P +S+Y A KGAMNQ+T+NLACEWA+DNIR NT+APW
Sbjct: 141 PLLKASGRGSIVFISSVAGVMALPVISIYAASKGAMNQVTRNLACEWAEDNIRVNTIAPW 200

Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
           VI TS+I   ++ P   E +  I  +TPI R GEPDEVSSLVAFLC PAASYITGQ+ICV
Sbjct: 201 VINTSLIHKAKDDPSSEEKIKRIISRTPICRMGEPDEVSSLVAFLCFPAASYITGQVICV 260

Query: 242 DGGVTVT 248
           DGG +VT
Sbjct: 261 DGGYSVT 267

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297746018|emb|CBI16074.3| unnamed protein product [Vitis vinifera]

 Score =  350 bits (898), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 169/247 (68%), Positives = 198/247 (80%), Gaps = 3/247 (1%)

Query: 1   MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
           MTALVTGGT+GIGHA VEELA   A +HTCSR + ELD  L +WK KGF V+GSVCD+SS
Sbjct: 1   MTALVTGGTKGIGHAIVEELAGLVATIHTCSRKETELDECLKDWKAKGFGVSGSVCDVSS 60

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
           R QREKL+ETV+S+F GKLNIL+NNAAI   KPTV++TAE+ ST+ + NFESV+HLSQLA
Sbjct: 61  RAQREKLMETVSSVFNGKLNILVNNAAIVIQKPTVEVTAEEFSTIMAINFESVYHLSQLA 120

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
           HPL KASG GSIVFISSV GV  +  +S Y A KGAMNQLTKNLACEWA+DNIR+N VAP
Sbjct: 121 HPLLKASGAGSIVFISSVAGVVSLKYLSAYSATKGAMNQLTKNLACEWAEDNIRSNAVAP 180

Query: 181 WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
           W IKT M+   ++      FL+G+  + P+ R G+P EVSSLVAFLCLPA+SYITGQ IC
Sbjct: 181 WYIKTPMV---DQMLSNKTFLEGVINRAPLRRVGDPKEVSSLVAFLCLPASSYITGQTIC 237

Query: 241 VDGGVTV 247
           VDGGVTV
Sbjct: 238 VDGGVTV 244

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297746010|emb|CBI16066.3| unnamed protein product [Vitis vinifera]

 Score =  350 bits (897), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 168/247 (68%), Positives = 199/247 (80%), Gaps = 3/247 (1%)

Query: 1   MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
           MTALVTGGT+GIGHA VEELA  GA +HTCSR + EL+  L +WK KGF V+GSVCD+SS
Sbjct: 19  MTALVTGGTKGIGHAIVEELAGLGATIHTCSRKETELNECLKDWKAKGFGVSGSVCDVSS 78

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
           R QREKL+ETV+S+F+GKLNIL+NNAAI   KPTV++TAE+ ST+ + NFESV+HLSQLA
Sbjct: 79  RAQREKLMETVSSVFKGKLNILVNNAAIVIQKPTVEVTAEEFSTIMAINFESVYHLSQLA 138

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
           HPL KASG GSIVFISSV GV  +  +S Y   KGAMNQLTKNLACEWA+DNIR+N VAP
Sbjct: 139 HPLLKASGAGSIVFISSVAGVVSVKYLSAYAVTKGAMNQLTKNLACEWAEDNIRSNAVAP 198

Query: 181 WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
           W IKT M+   ++      FL+G+  + P+ R G+P EVSSLVAFLCLPA+SYITGQ IC
Sbjct: 199 WCIKTPMV---DQMLSNKTFLEGVINRAPLRRVGDPKEVSSLVAFLCLPASSYITGQTIC 255

Query: 241 VDGGVTV 247
           VDGGVTV
Sbjct: 256 VDGGVTV 262

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359478910|ref|XP_003632186.1| PREDICTED: tropinone reductase homolog At1g07440-like [Vitis vinifera] gi|297746015|emb|CBI16071.3| unnamed protein product [Vitis vinifera]

 Score =  349 bits (896), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 169/256 (66%), Positives = 203/256 (79%), Gaps = 7/256 (2%)

Query: 1   MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
           MTALVTGGT+GIGHA VEELA  GA +HTCSR + EL+  L +WK KGF V+GSVCD+SS
Sbjct: 19  MTALVTGGTKGIGHAIVEELAGLGATIHTCSRKETELNECLKDWKAKGFGVSGSVCDVSS 78

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
           R QREKL++T++S+F GKLNILINNAAI+  KPT+++TAE+ ST+ +TNFESV+HLSQ+A
Sbjct: 79  RAQREKLMQTISSVFNGKLNILINNAAISIQKPTIEVTAEEFSTIMATNFESVYHLSQIA 138

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
           HPL KASG GSIVFISSV G+    ++S Y   KGAMNQLTKNLACEWAKDNIR+N VAP
Sbjct: 139 HPLLKASGAGSIVFISSVSGIVAHKNISAYSVTKGAMNQLTKNLACEWAKDNIRSNAVAP 198

Query: 181 WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
           W IKT M+   E+      FL+ +  + P+ R G+P EVSSLVAFLCLPA+SYITGQIIC
Sbjct: 199 WYIKTPMV---EQMLTNQAFLEEVINRAPLRRVGDPKEVSSLVAFLCLPASSYITGQIIC 255

Query: 241 VDGGVTVTVNVNGLRS 256
           VDGG+T    VNG  S
Sbjct: 256 VDGGMT----VNGFES 267

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147769646|emb|CAN63543.1| hypothetical protein VITISV_035429 [Vitis vinifera]

 Score =  348 bits (893), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 168/247 (68%), Positives = 198/247 (80%), Gaps = 3/247 (1%)

Query: 1   MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
           MTALVTGGT+GIGHA VEELA  GA +HTCSR + EL+  L +WK KGF V+GSVCD+SS
Sbjct: 19  MTALVTGGTKGIGHAIVEELAGLGAAIHTCSRKETELNECLKDWKAKGFGVSGSVCDVSS 78

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
           R QREKL+ETV+S+F GKLNIL+NNAAI   KPTV++TAE+ ST+ + NFESV+HLSQLA
Sbjct: 79  RAQREKLMETVSSVFNGKLNILVNNAAIVIQKPTVEVTAEEFSTIMAINFESVYHLSQLA 138

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
           HPL KASG GSIVFISSV GV  +  +S Y A KGAMNQLTKNLACEWA+DNIR+N VAP
Sbjct: 139 HPLLKASGAGSIVFISSVAGVVSLKYLSAYSATKGAMNQLTKNLACEWAEDNIRSNAVAP 198

Query: 181 WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
           W IKT M+   ++      FL+ +  + P+ R G+P EVSSLVAFLCLPA+SYITGQ IC
Sbjct: 199 WYIKTPMV---DQMLSNKTFLEXVINRAPLRRVGDPKEVSSLVAFLCLPASSYITGQTIC 255

Query: 241 VDGGVTV 247
           VDGGVTV
Sbjct: 256 VDGGVTV 262

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147838761|emb|CAN69507.1| hypothetical protein VITISV_016037 [Vitis vinifera]

 Score =  348 bits (892), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 168/247 (68%), Positives = 198/247 (80%), Gaps = 3/247 (1%)

Query: 1   MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
           MTALVTGGT+GIGHA VEELA  GA +HTCSR + EL+  L +WK KGF V+GSVCD+SS
Sbjct: 19  MTALVTGGTKGIGHAIVEELAGLGATIHTCSRKETELNECLKDWKAKGFGVSGSVCDVSS 78

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
           R QREKL+ETV+S+F+GKLNIL+NNAAI   KPTV++TAE+ ST+ + NFESV+HLSQLA
Sbjct: 79  RAQREKLMETVSSVFKGKLNILVNNAAIVIQKPTVEVTAEEFSTIMAINFESVYHLSQLA 138

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
           HPL KASG GSIVFISSV GV  I  +S Y   KGAMNQLTKNLACEWA+DNIR+N VAP
Sbjct: 139 HPLLKASGAGSIVFISSVAGVASIKYLSAYSVTKGAMNQLTKNLACEWAEDNIRSNAVAP 198

Query: 181 WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
           W IKT M+   ++      FL+ +  + P+ R G+P EVSSLVAFLCLPA+SYITGQ IC
Sbjct: 199 WYIKTPMV---DQMLSNKTFLEEVINRAPLRRVGDPKEVSSLVAFLCLPASSYITGQTIC 255

Query: 241 VDGGVTV 247
           VDGGVTV
Sbjct: 256 VDGGVTV 262

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359478613|ref|XP_003632145.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized short-chain type dehydrogenase/reductase y4vI-like [Vitis vinifera]

 Score =  348 bits (892), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 168/247 (68%), Positives = 199/247 (80%), Gaps = 3/247 (1%)

Query: 1   MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
           MTALVTGGT+GIGHA VEELA  GA +HTCSR + EL+  L +WK KGF V+GSVCD+SS
Sbjct: 288 MTALVTGGTKGIGHAIVEELAGLGATIHTCSRKETELNECLKDWKAKGFGVSGSVCDVSS 347

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
             QREKL+ETV+S+F+GKLNIL+NNAAI   KPTV++TAE+ ST+ + NFESV+HLSQLA
Sbjct: 348 PAQREKLMETVSSVFKGKLNILVNNAAIVIQKPTVEVTAEEFSTIMAINFESVYHLSQLA 407

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
           HPL KASG GSIVFISSV GV  +  +S Y A KGAMNQLTKNLACEWA+DNIR+N VAP
Sbjct: 408 HPLLKASGAGSIVFISSVAGVVSLKYLSAYSATKGAMNQLTKNLACEWAEDNIRSNAVAP 467

Query: 181 WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
           W IKT M+   ++      FL+G+  + P+ R G+P EVSSLVAFLCLPA+SYITGQ IC
Sbjct: 468 WYIKTPMV---DQMLSNKTFLEGVINRAPLRRVGDPKEVSSLVAFLCLPASSYITGQTIC 524

Query: 241 VDGGVTV 247
           VDGGVTV
Sbjct: 525 VDGGVTV 531

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297740327|emb|CBI30509.3| unnamed protein product [Vitis vinifera]

 Score =  347 bits (889), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 167/249 (67%), Positives = 200/249 (80%), Gaps = 4/249 (1%)

Query: 1   MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
           MTAL+TGGTRGIG+A VEELA  GAIVHTCSRNQ EL+ RL EW+ KGF+V+GSVCDL+S
Sbjct: 1   MTALITGGTRGIGYAIVEELAELGAIVHTCSRNQTELNERLQEWEGKGFRVSGSVCDLTS 60

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
           R QREKL ETV+S+F+GKLNIL+NNAA   +K   + TAED S++  TNFES +HL QLA
Sbjct: 61  RAQREKLTETVSSLFEGKLNILVNNAATVALKAPTNYTAEDCSSILQTNFESPYHLCQLA 120

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
           HPL KASG GSI+FISSV G+  +P +S+Y A KGA+NQ+TKNLACEWAKDNIRTN VAP
Sbjct: 121 HPLLKASGRGSIIFISSVAGLISLPHMSVYAATKGAINQVTKNLACEWAKDNIRTNAVAP 180

Query: 181 WVIKTSMIKPFEE--GPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI 238
           W ++TS ++P  E   P  + +   +AR TP+ R  EPDEVS LVAFLCLPAASYITGQ+
Sbjct: 181 WTVRTS-VRPILEPDNPMATAYPQLLAR-TPLHRIAEPDEVSPLVAFLCLPAASYITGQV 238

Query: 239 ICVDGGVTV 247
           ICVDGG +V
Sbjct: 239 ICVDGGFSV 247

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	259
TAIR|locus:2152815	264	AT5G06060 [Arabidopsis thalian	0.918	0.901	0.659	1.4e-80
TAIR|locus:2043177	269	SAG13 "senescence-associated g	0.918	0.884	0.640	7.9e-78
TAIR|locus:2043167	271	AT2G29360 [Arabidopsis thalian	0.922	0.881	0.628	1.6e-77
TAIR|locus:2043037	268	AT2G29150 [Arabidopsis thalian	0.918	0.888	0.632	9e-77
TAIR|locus:2043052	262	AT2G29290 [Arabidopsis thalian	0.922	0.912	0.611	2.4e-76
TAIR|locus:2043087	322	AT2G29260 [Arabidopsis thalian	0.922	0.742	0.615	1.3e-75
TAIR|locus:2043152	268	AT2G29370 [Arabidopsis thalian	0.922	0.891	0.611	3.5e-75
TAIR|locus:2042992	260	TRI "tropinone reductase" [Ara	0.922	0.919	0.611	2.5e-74
TAIR|locus:2025072	266	AT1G07440 [Arabidopsis thalian	0.915	0.890	0.618	4e-74
TAIR|locus:2043012	269	AT2G29320 [Arabidopsis thalian	0.922	0.888	0.592	6.1e-71

TAIR|locus:2152815 AT5G06060 [Arabidopsis thaliana (taxid:3702)]

 Score = 809 (289.8 bits), Expect = 1.4e-80, P = 1.4e-80
 Identities = 159/241 (65%), Positives = 190/241 (78%)

Query:     2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             TALVTGGTRGIG A VEELA+FGA VHTCSRNQ EL+A L++WK  G  V+GSVCD S R
Sbjct:    13 TALVTGGTRGIGRAVVEELAKFGAKVHTCSRNQEELNACLNDWKANGLVVSGSVCDASVR 72

Query:    62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
             +QREKLI+  +S F GKLNILINN      KPTV+ ++E+ + + STN ES FHLSQ+AH
Sbjct:    73 DQREKLIQEASSAFSGKLNILINNVGTNVRKPTVEYSSEEYAKIMSTNLESAFHLSQIAH 132

Query:   122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
             PL KASG GSIVFISSV G+  + S S+YGA KGA+NQLT+NLACEWA DNIRTN VAPW
Sbjct:   133 PLLKASGVGSIVFISSVAGLVHLSSGSIYGATKGALNQLTRNLACEWASDNIRTNCVAPW 192

Query:   182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
              IKTS+++   E     EF++ +  +TP+GR GEP+EVSSLVAFLCLPA+SYITGQ+I V
Sbjct:   193 YIKTSLVETLLEK---KEFVEAVVSRTPLGRVGEPEEVSSLVAFLCLPASSYITGQVISV 249

Query:   242 D 242
             D
Sbjct:   250 D 250

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0005829 "cytosol" evidence=IDA

TAIR|locus:2043177 SAG13 "senescence-associated gene 13" [Arabidopsis thaliana (taxid:3702)]

 Score = 783 (280.7 bits), Expect = 7.9e-78, P = 7.9e-78
 Identities = 155/242 (64%), Positives = 183/242 (75%)

Query:     1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
             MTALVTGG++GIG A VEELA  GA VHTC+R++ +L  RL EW+ KGF+VT SVCD+SS
Sbjct:    18 MTALVTGGSKGIGEAVVEELAMLGAKVHTCARDETQLQERLREWQAKGFQVTTSVCDVSS 77

Query:    61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
             R+QR KL+ETV+S++QGKLNIL+NN   +  KPT + TAED S V +TN ES FHLSQLA
Sbjct:    78 RDQRVKLMETVSSLYQGKLNILVNNVGTSIFKPTTEYTAEDFSFVMATNLESAFHLSQLA 137

Query:   121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
             HPL KASG+GSIV ISS  GV  +   S+YGA KGAMNQL +NLACEWA DNIRTN+V P
Sbjct:   138 HPLLKASGSGSIVLISSAAGVVHVNVGSIYGATKGAMNQLARNLACEWASDNIRTNSVCP 197

Query:   181 WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
             W I T +   F +     EF     R TP+GR GE +EVS LVAFLCLP+ASYITGQ IC
Sbjct:   198 WYITTPLSNDFFD----EEFKKEAVRTTPMGRVGEANEVSPLVAFLCLPSASYITGQTIC 253

Query:   241 VD 242
             VD
Sbjct:   254 VD 255

GO:0000166 "nucleotide binding" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0007568 "aging" evidence=IEP;RCA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=TAS

GO:0002213 "defense response to insect" evidence=IEP

TAIR|locus:2043167 AT2G29360 [Arabidopsis thaliana (taxid:3702)]

 Score = 780 (279.6 bits), Expect = 1.6e-77, P = 1.6e-77
 Identities = 152/242 (62%), Positives = 184/242 (76%)

Query:     1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
             MTALVTGG++GIG A VEELA  GA +HTC+R++ +L   L +W+ KGF+VT SVCD+SS
Sbjct:    19 MTALVTGGSKGIGEAVVEELATLGARIHTCARDETQLQESLRKWQAKGFQVTTSVCDVSS 78

Query:    61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
             R++REKL+ETV++IF+GKLNIL+NN     VKPT+  TAED S   +TN ES FHLSQLA
Sbjct:    79 RDKREKLMETVSTIFEGKLNILVNNVGTCIVKPTLQHTAEDFSFTMATNLESAFHLSQLA 138

Query:   121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
             HPL KASG+GSIV ISSV GV  +   S+YG  KGAMNQL +NLACEWA DNIRTN+V P
Sbjct:   139 HPLLKASGSGSIVLISSVSGVVHVNGASIYGVSKGAMNQLGRNLACEWASDNIRTNSVCP 198

Query:   181 WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
             W I+T ++    E     EF   +  + P+GR GE +EVSSLVAFLCLPAASYITGQ IC
Sbjct:   199 WFIETPLVT---ESLSNEEFRKEVESRPPMGRVGEVNEVSSLVAFLCLPAASYITGQTIC 255

Query:   241 VD 242
             VD
Sbjct:   256 VD 257

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0015979 "photosynthesis" evidence=RCA

GO:0016556 "mRNA modification" evidence=RCA

TAIR|locus:2043037 AT2G29150 [Arabidopsis thaliana (taxid:3702)]

 Score = 773 (277.2 bits), Expect = 9.0e-77, P = 9.0e-77
 Identities = 153/242 (63%), Positives = 186/242 (76%)

Query:     1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
             MTALVTGG++G+G A VEELA  GA VHTC+R++ +L  RL EW+ KGF+VT SVCD+SS
Sbjct:    19 MTALVTGGSKGLGEAVVEELAMLGARVHTCARDETQLQERLREWQAKGFEVTTSVCDVSS 78

Query:    61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
             REQREKL+ETV+S+FQGKLNIL+NNA    +KP+ + TAED S + +TN ES FHLSQ+A
Sbjct:    79 REQREKLMETVSSVFQGKLNILVNNAGTGIIKPSTEYTAEDYSFLMATNLESAFHLSQIA 138

Query:   121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
             HPL KASG+GSIVF+SSV G+      S+YGA KGAMNQL ++LACEWA DNIR N+V P
Sbjct:   139 HPLLKASGSGSIVFMSSVAGLVHT-GASIYGASKGAMNQLGRSLACEWASDNIRVNSVCP 197

Query:   181 WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
             WVI T +   F    E  +    +  +TP+GR GE +EVSSLVAFLC PAASYITGQ IC
Sbjct:   198 WVITTPLTS-FIFSDE--KLRKAVEDKTPMGRVGEANEVSSLVAFLCFPAASYITGQTIC 254

Query:   241 VD 242
             VD
Sbjct:   255 VD 256

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2043052 AT2G29290 [Arabidopsis thaliana (taxid:3702)]

 Score = 769 (275.8 bits), Expect = 2.4e-76, P = 2.4e-76
 Identities = 148/242 (61%), Positives = 184/242 (76%)

Query:     1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
             M ALVTGGT+GIG A VEEL+  GA VHTC+R++ +L  RL EW+ KGF+VT S+CD+S 
Sbjct:    10 MNALVTGGTKGIGEAVVEELSILGARVHTCARDETQLQERLREWQEKGFQVTTSICDVSL 69

Query:    61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
             REQREKL+ETV+S+FQGKLNIL+NN     +KPT + TAE+ S + +TN +S FH+SQLA
Sbjct:    70 REQREKLMETVSSLFQGKLNILVNNVGTLMLKPTTEYTAEEFSFLMATNLDSAFHISQLA 129

Query:   121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
             HPL KASG+GSIV +SS+ GV  +   S+YGA KGAMNQL +NLACEWA DNIRTN + P
Sbjct:   130 HPLLKASGSGSIVLMSSIAGVVHVGVGSIYGATKGAMNQLARNLACEWASDNIRTNAICP 189

Query:   181 WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
             W+I T +I       E  +  +    +TP+GR GE +EVS LVAFLCLPAASYITGQ+IC
Sbjct:   190 WLITTPLISDLLSVEEMKKEAE---ERTPMGRVGEANEVSPLVAFLCLPAASYITGQVIC 246

Query:   241 VD 242
             VD
Sbjct:   247 VD 248

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2043087 AT2G29260 [Arabidopsis thaliana (taxid:3702)]

 Score = 762 (273.3 bits), Expect = 1.3e-75, P = 1.3e-75
 Identities = 149/242 (61%), Positives = 184/242 (76%)

Query:     1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
             M+ALVTGGTRGIG A VEELA  GA VHTC+RN+ EL+  L +W   GF+V GSVCD+S 
Sbjct:    71 MSALVTGGTRGIGRAIVEELAGLGAEVHTCARNEYELENCLSDWNRSGFRVAGSVCDVSD 130

Query:    61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
             R QRE L+ETV+S+F+GKL+IL+NN      KP V+ TA + ST+ STNFESVFHL QLA
Sbjct:   131 RSQREALMETVSSVFEGKLHILVNNVGTNIRKPMVEFTAGEFSTLMSTNFESVFHLCQLA 190

Query:   121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
             +PL + S  GS+VFISSV G   + ++S+  + KGA+NQLT++LACEWAKDNIR N VAP
Sbjct:   191 YPLLRESKAGSVVFISSVSGFVSLKNMSVQSSTKGAINQLTRSLACEWAKDNIRINAVAP 250

Query:   181 WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
             W IKTSM+   E+     E+L+ +   TP+GR GEP EVSS VAFLCLPA+SYITGQI+C
Sbjct:   251 WYIKTSMV---EQVLSNKEYLEEVYSVTPLGRLGEPREVSSAVAFLCLPASSYITGQILC 307

Query:   241 VD 242
             VD
Sbjct:   308 VD 309

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2043152 AT2G29370 [Arabidopsis thaliana (taxid:3702)]

 Score = 758 (271.9 bits), Expect = 3.5e-75, P = 3.5e-75
 Identities = 148/242 (61%), Positives = 183/242 (75%)

Query:     1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
             MTALVTGG++G+G A VEELA  GA VHTC+R++ +L   L EW+ KG +VT SVCD+SS
Sbjct:    19 MTALVTGGSKGLGKAVVEELAMLGARVHTCARDETQLQESLREWQAKGLQVTTSVCDVSS 78

Query:    61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
             R+QREKL+ETV+S+FQGKL+IL+ N  I  +KPT + TAE+ S + +TN ES FH SQLA
Sbjct:    79 RDQREKLMETVSSLFQGKLSILVPNVGIGVLKPTTECTAEEFSFIIATNLESTFHFSQLA 138

Query:   121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
             HPL KASG+G+IV +SSV GV  + + S+YGA KGAMNQL +NLACEWA DNIR N+V P
Sbjct:   139 HPLLKASGSGNIVLMSSVAGVVNLGNTSIYGATKGAMNQLARNLACEWASDNIRANSVCP 198

Query:   181 WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
             W I T   K F    +  E ++ +   TP+ R GE +EVSSLVAFLCLPAASYITGQ IC
Sbjct:   199 WFITTPSTKDFLGDKDVKEKVESV---TPLRRVGEANEVSSLVAFLCLPAASYITGQTIC 255

Query:   241 VD 242
             VD
Sbjct:   256 VD 257

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2042992 TRI "tropinone reductase" [Arabidopsis thaliana (taxid:3702)]

 Score = 750 (269.1 bits), Expect = 2.5e-74, P = 2.5e-74
 Identities = 148/242 (61%), Positives = 178/242 (73%)

Query:     1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
             +TALVTGG  GIGHA VEELA FGA +H C  ++  L+  L EW+ KGF+V+GSVCD S+
Sbjct:    10 LTALVTGGASGIGHAIVEELAGFGAKIHVCDISKTLLNQSLSEWEKKGFQVSGSVCDASN 69

Query:    61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
             R +RE L++TVT+IF GKLNIL+NN      KPT++  AED S + STN ES +HLSQL+
Sbjct:    70 RLERETLMQTVTTIFDGKLNILVNNVGTIRTKPTIEYEAEDFSFLISTNLESAYHLSQLS 129

Query:   121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
             HPL KASGNG I FISS  G+    + S+YG  KGA+NQL +NLACEWAKD IR N VAP
Sbjct:   130 HPLLKASGNGIITFISSAAGIVSFDAASIYGLTKGALNQLARNLACEWAKDGIRANAVAP 189

Query:   181 WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
               I T++ KPF E    +E L     +TP+GRAGEP EV+SLVAFLCLPAASYITGQ IC
Sbjct:   190 NFITTALAKPFLEDAGFNEILSS---RTPLGRAGEPREVASLVAFLCLPAASYITGQTIC 246

Query:   241 VD 242
             VD
Sbjct:   247 VD 248

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0000041 "transition metal ion transport" evidence=RCA

GO:0006826 "iron ion transport" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2025072 AT1G07440 [Arabidopsis thaliana (taxid:3702)]

 Score = 748 (268.4 bits), Expect = 4.0e-74, P = 4.0e-74
 Identities = 149/241 (61%), Positives = 178/241 (73%)

Query:     2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             T LVTGGT+GIGHA VEE A FGA++HTC+RN+ EL+  L +W+ KGF+VTGSVCD S R
Sbjct:    16 TVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLR 75

Query:    62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
              +REKL++TV+S+F GKL+ILINN      KPT+D TAED S   STN ES +HLSQLAH
Sbjct:    76 PEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAH 135

Query:   122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
             PL KASG G+I+F+SS+ GV      S+Y A KGA+NQL +NLACEWA D IR N VAP 
Sbjct:   136 PLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPA 195

Query:   182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
             VI T    P  E     EF   +  + P+GR GEP+EVSSLVAFLC+PAASYITGQ ICV
Sbjct:   196 VIAT----PLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYITGQTICV 251

Query:   242 D 242
             D
Sbjct:   252 D 252

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0080167 "response to karrikin" evidence=IEP

GO:0000023 "maltose metabolic process" evidence=RCA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0019252 "starch biosynthetic process" evidence=RCA

GO:0043085 "positive regulation of catalytic activity" evidence=RCA

TAIR|locus:2043012 AT2G29320 [Arabidopsis thaliana (taxid:3702)]

 Score = 718 (257.8 bits), Expect = 6.1e-71, P = 6.1e-71
 Identities = 144/243 (59%), Positives = 177/243 (72%)

Query:     1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
             MTALVTG   GIG+A VEELA FGA +H C  ++  L+  L EW+NKGF+V+GSVCD++S
Sbjct:    16 MTALVTGAASGIGYAIVEELAGFGAKIHICDISKTLLNQSLSEWENKGFQVSGSVCDVTS 75

Query:    61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
               +REKL++TV+SIF GKLNIL+NN  +   KPT +  A+D +   STN E+ +H  QL+
Sbjct:    76 HPEREKLMQTVSSIFDGKLNILVNNVGVLRGKPTTEYVADDFTFHISTNLEAAYHFCQLS 135

Query:   121 HPLFKASGNGSIVFISSVGGVRG-IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
             HPL KASG GSIVF+SSV GV   I   S+YG  KGA+NQL +NLACEWAKD IR N VA
Sbjct:   136 HPLLKASGYGSIVFLSSVAGVVSLIDCGSIYGLTKGALNQLARNLACEWAKDGIRANAVA 195

Query:   180 PWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
             P V+KT+  + F E     E   G+  +TP+GR GEP+EVSSLV FLCLPAASYITGQ I
Sbjct:   196 PNVVKTAQSQSFLEDVSKKE---GLLSRTPLGRVGEPNEVSSLVVFLCLPAASYITGQTI 252

Query:   240 CVD 242
             CVD
Sbjct:   253 CVD 255

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O67610	FABG_AQUAE	1, ., 1, ., 1, ., 1, 0, 0	0.3647	0.9150	0.9556	yes	no
Q9X248	FABG_THEMA	1, ., 1, ., 1, ., 1, 0, 0	0.3483	0.9189	0.9674	yes	no
Q8WNV7	DHRS4_PIG	1, ., 1, ., 1, ., 1, 8, 4	0.3580	0.9189	0.8530	yes	no
P99120	BUTA_STAAN	1, ., 1, ., 1, ., 3, 0, 4	0.324	0.9343	0.9379	yes	no
Q9KQH7	FABG_VIBCH	1, ., 1, ., 1, ., 1, 0, 0	0.3415	0.9034	0.9590	yes	no
Q9GKX2	DHRS4_RABIT	1, ., 1, ., 1, ., 1, 8, 4	0.3621	0.9189	0.9153	yes	no
Q8KWT4	BACC2_BACIU	1, ., -, ., -, ., -	0.3346	0.9343	0.9565	yes	no
P66775	BUTA_STAAM	1, ., 1, ., 1, ., 3, 0, 4	0.324	0.9343	0.9379	yes	no
P50162	TRN1_DATST	1, ., 1, ., 1, ., 2, 0, 6	0.5853	0.9459	0.8974	N/A	no
P50163	TRN2_DATST	1, ., 1, ., 1, ., 2, 3, 6	0.5778	0.9420	0.9384	N/A	no
P50164	TRN2_HYONI	1, ., 1, ., 1, ., 2, 3, 6	0.5843	0.9382	0.9346	N/A	no
P50165	TRNH_DATST	1, ., 1, ., 1, ., -	0.6194	0.9536	0.9216	N/A	no
Q99LB2	DHRS4_MOUSE	1, ., 1, ., 1, ., 1, 8, 4	0.3827	0.9189	0.8530	yes	no
Q5RCF8	DHRS4_PONAB	1, ., 1, ., 1, ., 1, 8, 4	0.3703	0.9189	0.8561	yes	no
Q9PKF7	FABG_CHLMU	1, ., 1, ., 1, ., 1, 0, 0	0.3346	0.9111	0.9516	yes	no
Q5HJP2	BUTA_STAAC	1, ., 1, ., 1, ., 3, 0, 4	0.324	0.9343	0.9379	yes	no
P39640	BACC_BACSU	1, ., -, ., -, ., -	0.3346	0.9343	0.9565	yes	no
Q937L4	CPNA_COMTE	1, ., 1, ., 1, ., 1, 6, 3	0.3483	0.9189	0.952	yes	no
P50199	GNO_GLUOX	1, ., 1, ., 1, ., 6, 9	0.3493	0.9305	0.9414	yes	no
Q8SPU8	DHRS4_BOVIN	1, ., 1, ., 1, ., 1, 8, 4	0.3827	0.9189	0.8530	yes	no
P94681	TSAC_COMTE	1, ., 2, ., 1, ., 6, 2	0.3522	0.9150	0.9404	yes	no
Q8VID1	DHRS4_RAT	1, ., 1, ., 1, ., 1, 8, 4	0.3744	0.9189	0.8530	yes	no
P43713	FABG_HAEIN	1, ., 1, ., 1, ., 1, 0, 0	0.3495	0.9150	0.9793	yes	no
P38004	FABG_CHLTR	1, ., 1, ., 1, ., 1, 0, 0	0.3252	0.9150	0.9556	yes	no
Q9BTZ2	DHRS4_HUMAN	1, ., 1, ., 1, ., 1, 8, 4	0.3703	0.9189	0.8561	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.963
3rd Layer	1.5.1	LOW CONFIDENCE prediction!
4th Layer	1.1.1.269	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	259
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	1e-128
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	3e-83
cd05233	234	cd05233, SDR_c, classical (c) SDRs	2e-75
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-71
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-66
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-64
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-64
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	2e-63
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	2e-60
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-60
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	4e-58
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	5e-58
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	2e-57
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	1e-56
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	3e-54
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	3e-52
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	5e-51
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	9e-49
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	2e-48
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	2e-48
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	5e-48
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	2e-47
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	2e-47
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	9e-47
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	2e-46
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	3e-46
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	4e-46
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	2e-45
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	4e-44
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	2e-43
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	8e-43
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	1e-42
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	2e-42
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	3e-42
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	7e-42
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	7e-42
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	1e-41
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	2e-41
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	2e-41
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	4e-41
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	2e-40
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	3e-40
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	7e-40
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	1e-39
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	4e-39
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	9e-39
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	1e-38
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	1e-38
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	3e-38
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	4e-38
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	4e-38
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	6e-38
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	6e-38
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	7e-38
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	1e-37
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	1e-37
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	3e-37
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	4e-37
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	2e-36
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	5e-36
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	5e-36
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	9e-36
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	1e-35
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	1e-35
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	2e-35
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	2e-35
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	2e-35
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	4e-35
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	1e-34
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	2e-34
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	3e-34
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	3e-34
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	4e-34
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	4e-34
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-34
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	7e-34
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	7e-34
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	1e-33
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	1e-33
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	1e-33
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	1e-33
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	1e-33
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-33
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	4e-33
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-33
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	2e-32
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	2e-32
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	2e-32
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	3e-32
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	9e-32
cd05361	242	cd05361, haloalcohol_DH_SDR_c-like, haloalcohol de	1e-31
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	1e-31
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	2e-31
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	2e-31
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	3e-31
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	3e-31
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	3e-31
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	3e-31
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	3e-31
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	7e-31
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	7e-31
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	7e-31
pfam13561	239	pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote	9e-31
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	1e-30
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	1e-30
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	2e-30
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	2e-30
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	2e-30
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	1e-29
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	1e-29
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	2e-29
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	2e-29
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-29
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	4e-29
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	2e-28
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	2e-28
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	2e-28
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	3e-28
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	3e-28
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	4e-28
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	8e-28
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	9e-28
TIGR01831	239	TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote	1e-27
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	1e-27
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	1e-27
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	2e-27
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	2e-27
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	3e-27
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-27
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	9e-27
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	1e-26
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	1e-26
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	1e-26
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	2e-26
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-26
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	3e-26
PRK08416	260	PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydro	6e-26
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	1e-25
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	1e-25
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	2e-25
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	2e-25
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	2e-25
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	2e-25
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	2e-25
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	3e-25
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	3e-25
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	4e-25
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	5e-25
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	1e-24
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	1e-24
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	2e-24
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	4e-24
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	6e-24
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	6e-24
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	9e-24
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	1e-23
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	1e-23
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	1e-23
cd05372	250	cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP)	4e-23
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	5e-23
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	5e-23
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	6e-23
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	8e-23
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	1e-22
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	2e-22
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	5e-22
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	1e-21
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	1e-21
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	1e-21
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	1e-21
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	6e-21
PRK07041	230	PRK07041, PRK07041, short chain dehydrogenase; Pro	7e-21
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	7e-21
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	7e-21
COG0623	259	COG0623, FabI, Enoyl-[acyl-carrier-protein]	9e-21
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	1e-20
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	4e-20
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	5e-20
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	6e-20
PRK07533	258	PRK07533, PRK07533, enoyl-(acyl carrier protein) r	7e-20
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-20
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	9e-20
PRK07985	294	PRK07985, PRK07985, oxidoreductase; Provisional	9e-20
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	2e-19
PRK07370	258	PRK07370, PRK07370, enoyl-(acyl carrier protein) r	5e-19
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	2e-18
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	3e-18
TIGR02685	267	TIGR02685, pter_reduc_Leis, pteridine reductase	3e-18
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	4e-18
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	3e-17
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	4e-17
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	1e-16
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	2e-16
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	2e-16
PRK09134	258	PRK09134, PRK09134, short chain dehydrogenase; Pro	4e-16
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	2e-15
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-15
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	3e-15
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	4e-15
PRK12428	241	PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydro	5e-15
PRK05717	255	PRK05717, PRK05717, oxidoreductase; Validated	7e-15
PRK05786	238	PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-14
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	1e-14
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	2e-14
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	2e-14
cd02266	186	cd02266, SDR, Short-chain dehydrogenases/reductase	2e-14
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	3e-14
PRK08017	256	PRK08017, PRK08017, oxidoreductase; Provisional	3e-14
PRK06940	275	PRK06940, PRK06940, short chain dehydrogenase; Pro	6e-14
cd11731	198	cd11731, Lin1944_like_SDR_c, Lin1944 and related p	8e-14
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	9e-14
TIGR03325	262	TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-	1e-13
PRK06079	252	PRK06079, PRK06079, enoyl-(acyl carrier protein) r	2e-13
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	5e-13
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	6e-13
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	9e-13
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	1e-12
PRK12744	257	PRK12744, PRK12744, short chain dehydrogenase; Pro	3e-12
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	4e-12
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	2e-11
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	2e-11
PRK08415	274	PRK08415, PRK08415, enoyl-(acyl carrier protein) r	4e-11
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	5e-11
PRK08690	261	PRK08690, PRK08690, enoyl-(acyl carrier protein) r	5e-11
PRK06997	260	PRK06997, PRK06997, enoyl-(acyl carrier protein) r	7e-11
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	2e-10
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	2e-10
cd05334	221	cd05334, DHPR_SDR_c_like, dihydropteridine reducta	2e-10
PRK06483	236	PRK06483, PRK06483, dihydromonapterin reductase; P	3e-10
PRK07102	243	PRK07102, PRK07102, short chain dehydrogenase; Pro	5e-10
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	1e-09
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	2e-09
PRK08594	257	PRK08594, PRK08594, enoyl-(acyl carrier protein) r	2e-09
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	2e-09
cd11730	206	cd11730, Tthb094_like_SDR_c, Tthb094 and related p	3e-09
PRK08177	225	PRK08177, PRK08177, short chain dehydrogenase; Pro	5e-09
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	5e-09
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	7e-09
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	8e-09
PLN02780	320	PLN02780, PLN02780, ketoreductase/ oxidoreductase	1e-08
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	1e-08
PRK07984	262	PRK07984, PRK07984, enoyl-(acyl carrier protein) r	2e-08
PRK07023	243	PRK07023, PRK07023, short chain dehydrogenase; Pro	2e-08
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	3e-08
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	3e-08
pfam08659	181	pfam08659, KR, KR domain	5e-08
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	5e-08
PRK06603	260	PRK06603, PRK06603, enoyl-(acyl carrier protein) r	6e-08
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	1e-07
cd09808	255	cd09808, DHRS-12_like_SDR_c-like, human dehydrogen	1e-07
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	1e-07
TIGR01500	256	TIGR01500, sepiapter_red, sepiapterin reductase	2e-07
cd05274	375	cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatt	4e-07
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	9e-07
PRK06101	240	PRK06101, PRK06101, short chain dehydrogenase; Pro	3e-06
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	4e-06
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	5e-06
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	6e-06
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	6e-06
PRK06300	299	PRK06300, PRK06300, enoyl-(acyl carrier protein) r	9e-06
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	1e-05
PLN02730	303	PLN02730, PLN02730, enoyl-[acyl-carrier-protein] r	2e-05
PRK08159	272	PRK08159, PRK08159, enoyl-(acyl carrier protein) r	3e-05
PRK07889	256	PRK07889, PRK07889, enoyl-(acyl carrier protein) r	5e-05
PRK09009	235	PRK09009, PRK09009, C factor cell-cell signaling p	6e-05
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	1e-04
PRK05854	313	PRK05854, PRK05854, short chain dehydrogenase; Pro	2e-04
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	2e-04
PRK06505	271	PRK06505, PRK06505, enoyl-(acyl carrier protein) r	4e-04
PRK05884	223	PRK05884, PRK05884, short chain dehydrogenase; Pro	5e-04
cd05258	337	cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e	0.002
PRK07578	199	PRK07578, PRK07578, short chain dehydrogenase; Pro	0.004

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score =  364 bits (935), Expect = e-128
 Identities = 158/247 (63%), Positives = 192/247 (77%), Gaps = 3/247 (1%)

Query: 1   MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
            TALVTGGT+GIG+A VEELA  GA V+TC+RNQ ELD  L EW+ KGFKV GSVCD+SS
Sbjct: 7   KTALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREKGFKVEGSVCDVSS 66

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
           R +R++L++TV S F GKLNIL+NNA     K   D T ED S + STNFE+ +HLS+LA
Sbjct: 67  RSERQELMDTVASHFGGKLNILVNNAGTNIRKEAKDYTEEDYSLIMSTNFEAAYHLSRLA 126

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
           HPL KASGNG+IVFISSV GV  +PS + YGA KGA+NQLT++LACEWAKDNIR N VAP
Sbjct: 127 HPLLKASGNGNIVFISSVAGVIAVPSGAPYGATKGALNQLTRSLACEWAKDNIRVNAVAP 186

Query: 181 WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
           WVI T +++P  +     E LD +  +TP+ R GEP+EV++LVAFLC+PAASYITGQII 
Sbjct: 187 WVIATPLVEPVIQQK---ENLDKVIERTPLKRFGEPEEVAALVAFLCMPAASYITGQIIA 243

Query: 241 VDGGVTV 247
           VDGG+T 
Sbjct: 244 VDGGLTA 250

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score =  249 bits (637), Expect = 3e-83
 Identities = 100/245 (40%), Positives = 140/245 (57%), Gaps = 6/245 (2%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLS 59
           TAL+TG ++GIG A   E    GA V   +R+   L     E   +    +V G   D+S
Sbjct: 11  TALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVS 70

Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
             E R  +++ V   +   L+IL+NNA     K  +D T ++   +  TN  S F LS+ 
Sbjct: 71  DDEDRRAILDWVEDHW-DGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRY 129

Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
           AHPL K   + +IV I SV G+  + S + YG  K A+ Q+T+NLA EWA+D IR N VA
Sbjct: 130 AHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVA 189

Query: 180 PWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
           PW I+T +       P   ++ + +  +TP+ R GEP+EV++ VAFLC+PAASYITGQ I
Sbjct: 190 PWYIRTPLTSGPLSDP---DYYEQVIERTPMRRVGEPEEVAAAVAFLCMPAASYITGQCI 246

Query: 240 CVDGG 244
            VDGG
Sbjct: 247 AVDGG 251

Length = 257

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  228 bits (583), Expect = 2e-75
 Identities = 99/240 (41%), Positives = 124/240 (51%), Gaps = 6/240 (2%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           ALVTG + GIG A    LAR GA V    RN+ E  A L   +  G        D+S  E
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNE-EALAELAAIEALGGNAVAVQADVSDEE 59

Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
             E L+E     F G+L+IL+NNA IA   P  ++T ED   V   N   VF L++ A P
Sbjct: 60  DVEALVEEALEEF-GRLDILVNNAGIARPGPLEELTDEDWDRVLDVNLTGVFLLTRAALP 118

Query: 123 LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWV 182
             K  G G IV ISSV G+R +P  + Y A K A+  LT++LA E A   IR N VAP +
Sbjct: 119 HMKKQGGGRIVNISSVAGLRPLPGQAAYAASKAALEGLTRSLALELAPYGIRVNAVAPGL 178

Query: 183 IKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 242
           + T M+          E         P+GR G P+EV+  V FL    ASYITGQ+I VD
Sbjct: 179 VDTPMLAKLGPEEAEKELAA----AIPLGRLGTPEEVAEAVVFLASDEASYITGQVIPVD 234

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  217 bits (556), Expect = 6e-71
 Identities = 100/248 (40%), Positives = 132/248 (53%), Gaps = 9/248 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLS 59
            A+VTG + GIG A  E LA+ GA  ++     N+      L E K +G        D+S
Sbjct: 7   VAIVTGASGGIGRAIAELLAKEGAKVVIAY-DINEEAAQELLEEIKEEGGDAIAVKADVS 65

Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
           S E  E L+E +   F GK++IL+NNA I+      D+T E+   V   N   V  L++ 
Sbjct: 66  SEEDVENLVEQIVEKF-GKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRY 124

Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
           A P      +G IV ISS+ G+ G     LY A KGA+N  TK LA E A   IR N VA
Sbjct: 125 ALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASKGAVNAFTKALAKELAPSGIRVNAVA 184

Query: 180 PWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
           P  I T M   F E  +     +G+A + P+GR G+P+E++ +V FL    ASYITGQII
Sbjct: 185 PGAIDTEMWSSFSEEDK-----EGLAEEIPLGRLGKPEEIAKVVLFLASDDASYITGQII 239

Query: 240 CVDGGVTV 247
            VDGG T 
Sbjct: 240 TVDGGWTC 247

Length = 247

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  205 bits (525), Expect = 2e-66
 Identities = 95/244 (38%), Positives = 122/244 (50%), Gaps = 6/244 (2%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           TALVTG +RGIG A    LA  GA V     N+   +A   E +  G +    V D+S  
Sbjct: 7   TALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDE 66

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
                LIE     F G L+IL+NNA I        ++ ED   V   N    F++ + A 
Sbjct: 67  AAVRALIEAAVEAF-GALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAAL 125

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P    +  G IV ISSV GV G P  + Y A K  +   TK LA E A   I  N VAP 
Sbjct: 126 PPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKAGVIGFTKALALELASRGITVNAVAPG 185

Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
            I T M +   E          I ++ P+GR G+P+EV++ VAFL   AASYITGQ+I V
Sbjct: 186 FIDTDMTEGLPEEV-----KAEILKEIPLGRLGQPEEVANAVAFLASDAASYITGQVIPV 240

Query: 242 DGGV 245
           +GG+
Sbjct: 241 NGGM 244

Length = 246

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  201 bits (515), Expect = 1e-64
 Identities = 80/248 (32%), Positives = 119/248 (47%), Gaps = 4/248 (1%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            A+VTG + GIG       A  GA V    RN+   + R+      G +      D+S  
Sbjct: 7   VAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAE-RVAAEILAGGRAIAVAADVSDE 65

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFV-KPTVDITAEDMSTVSSTNFESVFHLSQLA 120
              E  +      F G ++IL+NNA       P +D+   +   + + N +S +  +Q A
Sbjct: 66  ADVEAAVAAALERF-GSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAA 124

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
            P  +  G G+IV ++S  G+R  P +  Y A KGA+  LTK LA E   D IR N VAP
Sbjct: 125 VPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASKGAVITLTKALAAELGPDKIRVNAVAP 184

Query: 181 WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
            V++T +++ F   P   E         P+GR G P+++++   FL    AS+ITG  + 
Sbjct: 185 VVVETGLLEAFMGEP-TPENRAKFLATIPLGRLGTPEDIANAALFLASDEASWITGVTLV 243

Query: 241 VDGGVTVT 248
           VDGG  V 
Sbjct: 244 VDGGRCVG 251

Length = 251

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  199 bits (509), Expect = 7e-64
 Identities = 89/247 (36%), Positives = 124/247 (50%), Gaps = 7/247 (2%)

Query: 2   TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
            ALVTG  RG+G A    LAR GA +V     ++   +  +   +  G +      D++ 
Sbjct: 8   VALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTD 67

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
           +   E  +      F G+++IL+NNA I   KP  D++ ++   V   N   VFHL +  
Sbjct: 68  KAALEAAVAAAVERF-GRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAV 126

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
            P  +    G IV ISSV G+ G P  S Y A K  +  LTK LA E A+  I  N VAP
Sbjct: 127 VPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKAGLVGLTKALARELAEYGITVNMVAP 186

Query: 181 WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
             I T M           E  +    +TP+GR+G P++++  VAFLC  A+ YITGQ+I 
Sbjct: 187 GDIDTDMK-----EATIEEAREAKDAETPLGRSGTPEDIARAVAFLCSDASDYITGQVIE 241

Query: 241 VDGGVTV 247
           V GGV V
Sbjct: 242 VTGGVDV 248

Length = 249

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  198 bits (505), Expect = 2e-63
 Identities = 101/252 (40%), Positives = 126/252 (50%), Gaps = 12/252 (4%)

Query: 1   MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARL---HEWKNKGFKVTGSVCD 57
             ALVTG + GIG A    LAR GA V   +R   E  A        +  G +      D
Sbjct: 6   KVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAAD 65

Query: 58  LSS-REQREKLIETVTSIFQGKLNILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFH 115
           +S   E  E L+      F G+++IL+NNA IA    P  ++T ED   V   N    F 
Sbjct: 66  VSDDEESVEALVAAAEEEF-GRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFL 124

Query: 116 LSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
           L++ A PL K      IV ISSV G+ G P  + Y A K A+  LTK LA E A   IR 
Sbjct: 125 LTRAALPLMKK---QRIVNISSVAGLGGPPGQAAYAASKAALIGLTKALALELAPRGIRV 181

Query: 176 NTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLP-AASYI 234
           N VAP  I T M    E      E L  +A + P+GR G P+EV++ VAFL    AASYI
Sbjct: 182 NAVAPGYIDTPMTAALESAEL--EALKRLAARIPLGRLGTPEEVAAAVAFLASDEAASYI 239

Query: 235 TGQIICVDGGVT 246
           TGQ + VDGG+ 
Sbjct: 240 TGQTLPVDGGLL 251

Length = 251

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score =  190 bits (486), Expect = 2e-60
 Identities = 86/246 (34%), Positives = 115/246 (46%), Gaps = 8/246 (3%)

Query: 1   MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
             ALVTG  RGIG A    LA  GA V        +  A     +  G K      D+  
Sbjct: 7   RVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRD 66

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
           R   +  +      F G+L+IL+ NA I  + P  ++  E    V   N    F L+Q A
Sbjct: 67  RAALKAAVAAGVEDF-GRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAA 125

Query: 121 HPLFKASGNGSIVFISSVGGVR-GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
            P    +G G IV  SSV G R G P ++ Y A K  +   T+ LA E A  NI  N+V 
Sbjct: 126 LPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASKAGLVGFTRALALELAARNITVNSVH 185

Query: 180 PWVIKTSMIKPFEEGPEGS-EFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI 238
           P  + T M      G  G  ++ + IA   P+GR GEP+++++ V FL    A YITGQ 
Sbjct: 186 PGGVDTPMA-----GNLGDAQWAEAIAAAIPLGRLGEPEDIAAAVLFLASDEARYITGQT 240

Query: 239 ICVDGG 244
           + VDGG
Sbjct: 241 LPVDGG 246

Length = 251

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  189 bits (483), Expect = 6e-60
 Identities = 90/245 (36%), Positives = 128/245 (52%), Gaps = 7/245 (2%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVH-TCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           ALVTG +RGIG A  E LA  GA V    + ++   +A + E    G K      D+S  
Sbjct: 8   ALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDA 67

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           E  E+ ++   + F G ++IL+NNA I      + +  ED   V  TN   VF+L++   
Sbjct: 68  ESVERAVDEAKAEF-GGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVA 126

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
                  +G I+ ISSV G+ G P  + Y A K  +   TK+LA E A   I  N VAP 
Sbjct: 127 RPMMKQRSGRIINISSVVGLMGNPGQANYAASKAGVIGFTKSLARELASRGITVNAVAPG 186

Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
            I+T M    +  PE  +  + I  Q P+GR G+P+E++S VAFL    A+YITGQ + V
Sbjct: 187 FIETDM---TDALPE--DVKEAILAQIPLGRLGQPEEIASAVAFLASDEAAYITGQTLHV 241

Query: 242 DGGVT 246
           +GG+ 
Sbjct: 242 NGGMV 246

Length = 248

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score =  184 bits (470), Expect = 4e-58
 Identities = 97/244 (39%), Positives = 129/244 (52%), Gaps = 7/244 (2%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE-LDARLHEWKNKGFKVTGSVCDLSSR 61
           ALVTG +RGIG A   +LA+ GA V    R+  E  +  + E K  G K  G VCD+S R
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDR 60

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           E  + ++E +     G ++IL+NNA I      + +  ED   V  TN   VF+L+Q   
Sbjct: 61  EDVKAVVEEIEEEL-GPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVL 119

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
            +     +G I+ ISSV G+ G    + Y A K  +   TK+LA E A  NI  N VAP 
Sbjct: 120 RIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFTKSLAKELASRNITVNAVAPG 179

Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
            I T M     E     +    I  Q P+GR G P+EV++ VAFL    ASYITGQ+I V
Sbjct: 180 FIDTDMTDKLSE-----KVKKKILSQIPLGRFGTPEEVANAVAFLASDEASYITGQVIHV 234

Query: 242 DGGV 245
           DGG+
Sbjct: 235 DGGM 238

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score =  184 bits (469), Expect = 5e-58
 Identities = 92/247 (37%), Positives = 126/247 (51%), Gaps = 14/247 (5%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            ALVTG +RGIG A    LA  GA V    R++      + E K  G        D+S R
Sbjct: 2   VALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKALGGNAAALEADVSDR 61

Query: 62  EQREKLIETVTSIFQGKLNILINNAAI----AFVKPTVDITAEDMSTVSSTNFESVFHLS 117
           E  E L+E V + F G ++IL+NNA I      ++    ++ ED   V + N   VF+++
Sbjct: 62  EAVEALVEKVEAEF-GPVDILVNNAGITRDNLLMR----MSEEDWDAVINVNLTGVFNVT 116

Query: 118 QLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
           Q          +G I+ ISSV G+ G P  + Y A K  +   TK+LA E A   I  N 
Sbjct: 117 QAVIRAMIKRRSGRIINISSVVGLIGNPGQANYAASKAGVIGFTKSLAKELASRGITVNA 176

Query: 178 VAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ 237
           VAP  I T M     E     +  + I +Q P+GR G P+EV++ VAFL    ASYITGQ
Sbjct: 177 VAPGFIDTDMTDALPE-----KVKEKILKQIPLGRLGTPEEVANAVAFLASDDASYITGQ 231

Query: 238 IICVDGG 244
           ++ V+GG
Sbjct: 232 VLHVNGG 238

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score =  183 bits (466), Expect = 2e-57
 Identities = 87/246 (35%), Positives = 121/246 (49%), Gaps = 4/246 (1%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            ALVTG +RGIG      LA  GA +   SRN+ + +      + +G + T   CD+S  
Sbjct: 7   VALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKEGVEATAFTCDVSDE 66

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           E  +  +E +   F GK++IL+NNA I    P  +    +   V   N   VF +SQ   
Sbjct: 67  EAIKAAVEAIEEDF-GKIDILVNNAGIIRRHPAEEFPEAEWRDVIDVNLNGVFFVSQAVA 125

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
                 G+G I+ I S+    G P V  Y A KG +  LTK LA EWA+  I+ N +AP 
Sbjct: 126 RHMIKQGHGKIINICSLLSELGGPPVPAYAASKGGVAGLTKALATEWARHGIQVNAIAPG 185

Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
              T M +     P   EF D I ++ P GR G+P+++     FL   A+ Y+ GQII V
Sbjct: 186 YFATEMTEAVVADP---EFNDDILKRIPAGRWGQPEDLVGAAVFLASDASDYVNGQIIFV 242

Query: 242 DGGVTV 247
           DGG   
Sbjct: 243 DGGWLA 248

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score =  181 bits (461), Expect = 1e-56
 Identities = 90/252 (35%), Positives = 126/252 (50%), Gaps = 7/252 (2%)

Query: 1   MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
             ALVT  + GIG A    LAR GA V  C+RN+  L+    E +  G  V   V DL+ 
Sbjct: 2   KVALVTAASSGIGLAIARALAREGARVAICARNRENLERAASELRAGGAGVLAVVADLTD 61

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
            E  ++L+E     F G+++IL+NNA      P  ++T ED          SV  + +  
Sbjct: 62  PEDIDRLVEKAGDAF-GRVDILVNNAGGPPPGPFAELTDEDWLEAFDLKLLSVIRIVRAV 120

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
            P  K  G G IV ISS+      P++ L    +  +  L K L+ E A D +  N+V P
Sbjct: 121 LPGMKERGWGRIVNISSLTVKEPEPNLVLSNVARAGLIGLVKTLSRELAPDGVTVNSVLP 180

Query: 181 WVIKTS-MIKPFEEGPEGS-----EFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYI 234
             I T  + +  E   E       E    +A Q P+GR G+P+E+++L+AFL    ASYI
Sbjct: 181 GYIDTERVRRLLEARAEKEGISVEEAEKEVASQIPLGRVGKPEELAALIAFLASEKASYI 240

Query: 235 TGQIICVDGGVT 246
           TGQ I VDGG+T
Sbjct: 241 TGQAILVDGGLT 252

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score =  175 bits (446), Expect = 3e-54
 Identities = 90/252 (35%), Positives = 126/252 (50%), Gaps = 11/252 (4%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             LVTGG  GIG A  E  A  GA VH C  ++  L A        G KVT +V D++  
Sbjct: 13  RVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAAR--LPGAKVTATVADVADP 70

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTV-DITAEDMSTVSSTNFESVFHLSQLA 120
            Q E++ +T    F G L++L+NNA IA     + +IT E      + N    F+ ++ A
Sbjct: 71  AQVERVFDTAVERF-GGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAA 129

Query: 121 HPLFKASGNG-SIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
            PL KASG+G  I+ +SSV G  G P  + Y A K A+  L K+LA E     IR N + 
Sbjct: 130 VPLLKASGHGGVIIALSSVAGRLGYPGRTPYAASKWAVVGLVKSLAIELGPLGIRVNAIL 189

Query: 180 PWVIKTSM------IKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASY 233
           P +++          +  + G    E       +  +GR  EP+++++   FL  PAA Y
Sbjct: 190 PGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDIAATALFLASPAARY 249

Query: 234 ITGQIICVDGGV 245
           ITGQ I VDG V
Sbjct: 250 ITGQAISVDGNV 261

Length = 264

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score =  169 bits (431), Expect = 3e-52
 Identities = 88/246 (35%), Positives = 128/246 (52%), Gaps = 5/246 (2%)

Query: 3   ALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           ALVTGG+RGIG A    LA  GA +V    +++        E +  G K      D+S  
Sbjct: 1   ALVTGGSRGIGKAIALRLAERGADVVINYRKSKDAAAEVAAEIEELGGKAVVVRADVSQP 60

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           +  E++   V   F G+L++L++NAA    +P  ++T        +TN +++ H +Q A 
Sbjct: 61  QDVEEMFAAVKERF-GRLDVLVSNAAAGAFRPLSELTPAHWDAKMNTNLKALVHCAQQAA 119

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
            L +  G G IV ISS+G +R +P+    G  K A+  L + LA E     IR N V+P 
Sbjct: 120 KLMRERGGGRIVAISSLGSIRALPNYLAVGTAKAALEALVRYLAVELGPRGIRVNAVSPG 179

Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
           VI T  +  F   P   + L+  A  TP GR G P +V+  V FLC  AA  ITGQ + V
Sbjct: 180 VIDTDALAHF---PNREDLLEAAAANTPAGRVGTPQDVADAVGFLCSDAARMITGQTLVV 236

Query: 242 DGGVTV 247
           DGG+++
Sbjct: 237 DGGLSI 242

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score =  166 bits (424), Expect = 5e-51
 Identities = 80/247 (32%), Positives = 116/247 (46%), Gaps = 9/247 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF-KVTGSVCDLSS 60
            A +TGG  GIG A  +  A  GA V    R    L+A   E  +    +     CD+  
Sbjct: 5   VAFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSATGGRAHPIQCDVRD 64

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
            E  E  ++     F GK++ILINNAA  F+ P   ++     TV   +    F+ ++  
Sbjct: 65  PEAVEAAVDETLKEF-GKIDILINNAAGNFLAPAESLSPNGFKTVIDIDLNGTFNTTKAV 123

Query: 121 HP-LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
              L +A   GSI+ IS+     G P      A K  ++ LT++LA EW    IR N +A
Sbjct: 124 GKRLIEAKHGGSILNISATYAYTGSPFQVHSAAAKAGVDALTRSLAVEWGPYGIRVNAIA 183

Query: 180 PWVIKTS--MIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ 237
           P  I T+  M +    G    +    +  + P+GR G P+E+++L  FL   AASYI G 
Sbjct: 184 PGPIPTTEGMERLAPSG----KSEKKMIERVPLGRLGTPEEIANLALFLLSDAASYINGT 239

Query: 238 IICVDGG 244
            + VDGG
Sbjct: 240 TLVVDGG 246

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score =  161 bits (408), Expect = 9e-49
 Identities = 88/243 (36%), Positives = 127/243 (52%), Gaps = 5/243 (2%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           ALVT  T GIG A    LA+ GA V   SR Q  +D  +   + +G  VTG+VC +   E
Sbjct: 13  ALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGEGLSVTGTVCHVGKAE 72

Query: 63  QREKLIETVTSIFQGKLNILINNAAI-AFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
            RE+L+ T  ++  G ++IL++NAA+  F    +D T E    +   N ++   +++   
Sbjct: 73  DRERLVATAVNLH-GGVDILVSNAAVNPFFGNILDSTEEVWDKILDVNVKATALMTKAVV 131

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P  +  G GS+V +SSV      P +  Y   K A+  LTKNLA E A  NIR N +AP 
Sbjct: 132 PEMEKRGGGSVVIVSSVAAFHPFPGLGPYNVSKTALLGLTKNLAPELAPRNIRVNCLAPG 191

Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
           +IKTS            E    +     I R G+P++ + +V+FLC   ASYITG+ + V
Sbjct: 192 LIKTSFSSALWMDKAVEES---MKETLRIRRLGQPEDCAGIVSFLCSEDASYITGETVVV 248

Query: 242 DGG 244
            GG
Sbjct: 249 GGG 251

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score =  160 bits (406), Expect = 2e-48
 Identities = 86/246 (34%), Positives = 126/246 (51%), Gaps = 6/246 (2%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           ALVTGG  GIG AT    AR GA V    R+    +  +   +  G +     CD++   
Sbjct: 10  ALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDA 69

Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTV-DITAEDMSTVSSTNFESVFHLSQLAH 121
           + + L+E   + + G+L+   NNA I   +  + + +  +   +   N + V+   +   
Sbjct: 70  EVKALVEQTIAAY-GRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQI 128

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           PL  A G G+IV  +SV G+   P +S+Y A K A+  LTK+ A E+AK  IR N V P 
Sbjct: 129 PLMLAQGGGAIVNTASVAGLGAAPKMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPA 188

Query: 182 VIKTSMIKPFEEG-PEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
           VI T M +   E  P  +EF    A   P+GR G+ +EV+S V +LC   AS+ TG  + 
Sbjct: 189 VIDTDMFRRAYEADPRKAEF---AAAMHPVGRIGKVEEVASAVLYLCSDGASFTTGHALM 245

Query: 241 VDGGVT 246
           VDGG T
Sbjct: 246 VDGGAT 251

Length = 253

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score =  160 bits (407), Expect = 2e-48
 Identities = 82/251 (32%), Positives = 117/251 (46%), Gaps = 11/251 (4%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           TALVTGG+RG+G    E L   GA V   +R   EL+      +  G        D++  
Sbjct: 14  TALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADE 73

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQ-LA 120
              E+L E     F G ++IL+NNA   +  P  D   E    V + N   +F LSQ +A
Sbjct: 74  ADIERLAEETLERF-GHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVA 132

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSL----YGAYKGAMNQLTKNLACEWAKDNIRTN 176
                  G G I+ ++SV G+ G P   +    Y   KGA+   T+ LA EW    IR N
Sbjct: 133 KRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVINFTRALAAEWGPHGIRVN 192

Query: 177 TVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG 236
            +AP    T M +   E        + +   TP+GR G+ +++      L   A+ +ITG
Sbjct: 193 AIAPGFFPTKMTRGTLERLG-----EDLLAHTPLGRLGDDEDLKGAALLLASDASKHITG 247

Query: 237 QIICVDGGVTV 247
           QI+ VDGGV+ 
Sbjct: 248 QILAVDGGVSA 258

Length = 259

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score =  159 bits (403), Expect = 5e-48
 Identities = 87/251 (34%), Positives = 121/251 (48%), Gaps = 13/251 (5%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSS 60
            A+VTGG+RGIG A    LA  GA V     +    + +  E   K G K     CD+SS
Sbjct: 10  VAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGVKTKAYKCDVSS 69

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
           +E  EK  + +   F GK++ILI NA I   KP +D T E  + V   N   VF+ +Q A
Sbjct: 70  QESVEKTFKQIQKDF-GKIDILIANAGITVHKPALDYTYEQWNKVIDVNLNGVFNCAQAA 128

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSL----YGAYKGAMNQLTKNLACEWAKDNIRTN 176
             +FK  G GS++  +S+ G   I +       Y A K A+  L K+LA EWAK  IR N
Sbjct: 129 AKIFKKQGKGSLIITASMSGT--IVNRPQPQAAYNASKAAVIHLAKSLAVEWAKYFIRVN 186

Query: 177 TVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG 236
           +++P  I T +           E         P+ R   P+E+     +L   A+SY TG
Sbjct: 187 SISPGYIDTDLT-----DFVDKELRKKWESYIPLKRIALPEELVGAYLYLASDASSYTTG 241

Query: 237 QIICVDGGVTV 247
             + +DGG T 
Sbjct: 242 SDLIIDGGYTC 252

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score =  157 bits (399), Expect = 2e-47
 Identities = 79/247 (31%), Positives = 123/247 (49%), Gaps = 10/247 (4%)

Query: 2   TALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLS 59
            ALVTG +RGIG A  + LAR GA  +V+  S ++   +  + E +  G K      D+S
Sbjct: 5   VALVTGASRGIGRAIAKRLARDGASVVVNYAS-SKAAAEEVVAEIEAAGGKAIAVQADVS 63

Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
              Q  +L +     F G ++IL+NNA +   KP  + + E+   + + N +  F + Q 
Sbjct: 64  DPSQVARLFDAAEKAF-GGVDILVNNAGVMLKKPIAETSEEEFDRMFTVNTKGAFFVLQE 122

Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
           A    +    G I+ ISS       P+   Y   K A+   T+ LA E     I  N VA
Sbjct: 123 AAKRLR--DGGRIINISSSLTAAYTPNYGAYAGSKAAVEAFTRVLAKELGGRGITVNAVA 180

Query: 180 PWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
           P  + T M   F  G +  E ++G A+ +P+GR GEP++++ +VAFL  P   ++ GQ+I
Sbjct: 181 PGPVDTDM---FYAG-KTEEAVEGYAKMSPLGRLGEPEDIAPVVAFLASPDGRWVNGQVI 236

Query: 240 CVDGGVT 246
             +GG  
Sbjct: 237 RANGGYV 243

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  157 bits (399), Expect = 2e-47
 Identities = 82/248 (33%), Positives = 118/248 (47%), Gaps = 10/248 (4%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            A+VTGG RG+G A    L   GA V        E  A   E  +          D++  
Sbjct: 7   VAIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQAAAAELGDAARFFH---LDVTDE 63

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           +    +++T    F G+L++L+NNA I         T E+   +   N   VF  ++   
Sbjct: 64  DGWTAVVDTAREAF-GRLDVLVNNAGILTGGTVETTTLEEWRRLLDINLTGVFLGTRAVI 122

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAK--DNIRTNTVA 179
           P  K +G GSI+ +SS+ G+ G P+++ Y A KGA+  LTK+ A E A     IR N+V 
Sbjct: 123 PPMKEAGGGSIINMSSIEGLVGDPALAAYNASKGAVRGLTKSAALECATQGYGIRVNSVH 182

Query: 180 PWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
           P  I T M               G    TP+GRAGEPDE++  V +L    +S++TG  +
Sbjct: 183 PGYIYTPMTDELLIAQGEM----GNYPNTPMGRAGEPDEIAYAVVYLASDESSFVTGSEL 238

Query: 240 CVDGGVTV 247
            VDGG T 
Sbjct: 239 VVDGGYTA 246

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score =  155 bits (395), Expect = 9e-47
 Identities = 71/244 (29%), Positives = 107/244 (43%), Gaps = 5/244 (2%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            ALVTG  RG+G A  E LA  GA V        E        +  G +      DL+  
Sbjct: 9   RALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADP 68

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
              ++  +   +   G L+ L+NNA I   K   ++  +    V + N    F + + A 
Sbjct: 69  ASVQRFFDAAAAAL-GGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAAL 127

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P  + SG G IV ++S   + G P +  Y A KGA+  +T++LA E     I  N +AP 
Sbjct: 128 PHLRDSGRGRIVNLASDTALWGAPKLGAYVASKGAVIGMTRSLARELGGRGITVNAIAPG 187

Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
           +  T         P   E      +   + R   PD+V+  V FL   AA ++TGQ++ V
Sbjct: 188 LTATEA---TAYVPA-DERHAYYLKGRALERLQVPDDVAGAVLFLLSDAARFVTGQLLPV 243

Query: 242 DGGV 245
           +GG 
Sbjct: 244 NGGF 247

Length = 250

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score =  155 bits (393), Expect = 2e-46
 Identities = 77/250 (30%), Positives = 127/250 (50%), Gaps = 4/250 (1%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           AL+TG + GIG A  +  A+ GA +     NQ  +D  L  ++  G +  G VCD++  +
Sbjct: 13  ALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDED 72

Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
             + ++  +     G ++IL+NNA I    P ++++AED   V   +  + F +S+   P
Sbjct: 73  GVQAMVSQIEKEV-GVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIP 131

Query: 123 LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWV 182
                G+G I+ I S+    G  +VS Y A KG +  LTKN+A E+ + NI+ N + P  
Sbjct: 132 SMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGY 191

Query: 183 IKTSMIKPFEE---GPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
           I T    P  E         F   I  +TP  R G+P++++    FL   A++++ G I+
Sbjct: 192 IATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDLAGPAVFLASDASNFVNGHIL 251

Query: 240 CVDGGVTVTV 249
            VDGG+   +
Sbjct: 252 YVDGGILAYI 261

Length = 265

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score =  154 bits (392), Expect = 3e-46
 Identities = 88/252 (34%), Positives = 124/252 (49%), Gaps = 11/252 (4%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARL-HEWKNKGFKVTGSVCDLSS 60
            A++TG  +GIG A  E LA  G  +     N  E       E    G+       D++ 
Sbjct: 4   VAIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEISEAGYNAVAVGADVTD 63

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
           ++  E LI+     F G  ++++NNA IA + P + IT ED+  V + N   V    Q A
Sbjct: 64  KDDVEALIDQAVEKF-GSFDVMVNNAGIAPITPLLTITEEDLKKVYAVNVFGVLFGIQAA 122

Query: 121 HPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
              FK  G  G I+  SS+ GV+G P++  Y A K A+  LT+  A E A   I  N  A
Sbjct: 123 ARQFKKLGHGGKIINASSIAGVQGFPNLGAYSASKFAVRGLTQTAAQELAPKGITVNAYA 182

Query: 180 PWVIKTSMIKPFEE-------GPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAAS 232
           P ++KT M    +E        PEG  F +  +   P+GR  EP++V+ LV+FL    + 
Sbjct: 183 PGIVKTEMWDYIDEEVGEIAGKPEGEGFAE-FSSSIPLGRLSEPEDVAGLVSFLASEDSD 241

Query: 233 YITGQIICVDGG 244
           YITGQ I VDGG
Sbjct: 242 YITGQTILVDGG 253

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score =  154 bits (391), Expect = 4e-46
 Identities = 89/256 (34%), Positives = 124/256 (48%), Gaps = 20/256 (7%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            ALVTGG +GIG    E LA+ G  V     N+        E    G K      D+S +
Sbjct: 2   VALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDK 61

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           +Q    I+     F G  ++++NNA +A + P ++IT E++  V + N + V    Q A 
Sbjct: 62  DQVFSAIDQAAEKF-GGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAA 120

Query: 122 PLFKASGN-GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
             FK  G+ G I+  +S+ G  G P +S Y + K A+  LT+  A E A   I  N   P
Sbjct: 121 RQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCP 180

Query: 181 WVIKTSM------------IKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCL 228
            ++KT M             KP  EG E  EF   IA    +GR  EP++V+ LV+FL  
Sbjct: 181 GIVKTPMWEEIDEETSEIAGKPIGEGFE--EFSSEIA----LGRPSEPEDVAGLVSFLAS 234

Query: 229 PAASYITGQIICVDGG 244
             + YITGQ I VDGG
Sbjct: 235 EDSDYITGQSILVDGG 250

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score =  152 bits (386), Expect = 2e-45
 Identities = 90/249 (36%), Positives = 122/249 (48%), Gaps = 13/249 (5%)

Query: 1   MTALVTGGTRGIGHATVEELARFGAIVHT----CSRNQIELDARLHEWKNKGFKVTGSVC 56
              L+TGG+ G+G A    LA  GA V        R + E DA     +  G K  G   
Sbjct: 7   RRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAF 66

Query: 57  DLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHL 116
           D+         ++     F G+L+IL+NNA IA      +++ E+   V   N +  F++
Sbjct: 67  DVRDFAATRAALDAGVEEF-GRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNV 125

Query: 117 SQ-LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
           +Q    P+ +A   G IV I+SV GVRG      Y A K  +  LTK LA E A   I  
Sbjct: 126 TQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYAASKAGLIGLTKTLANELAPRGITV 185

Query: 176 NTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT 235
           N VAP  I T M        + +   + +    P+ R GEPDEV++LVAFL   AASY+T
Sbjct: 186 NAVAPGAINTPMA-------DNAAPTEHLLNPVPVQRLGEPDEVAALVAFLVSDAASYVT 238

Query: 236 GQIICVDGG 244
           GQ+I VDGG
Sbjct: 239 GQVIPVDGG 247

Length = 249

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  155 bits (393), Expect = 4e-44
 Identities = 82/248 (33%), Positives = 123/248 (49%), Gaps = 9/248 (3%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
            LVTG   GIG A  +  AR G  V    RN      R     + G        D+S   
Sbjct: 8   VLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERA---DSLGPDHHALAMDVSDEA 64

Query: 63  QREKLIETVTSIFQGKLNILINNAAIA--FVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
           Q  +  E +   F G++++L+NNA +    +  T+D T E+ + + + N    + +++ A
Sbjct: 65  QIREGFEQLHREF-GRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREA 123

Query: 121 HPLFKASGNG-SIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
             L    G+G +IV ++S  G+  +P  + Y A K A+  LT++LACEWA   IR N V 
Sbjct: 124 LRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAVISLTRSLACEWAAKGIRVNAVL 183

Query: 180 PWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
           P  ++T M+   E    G      +  + P+GR G P+E++  V FL    ASYITG  +
Sbjct: 184 PGYVRTQMVAELER--AGKLDPSAVRSRIPLGRLGRPEEIAEAVFFLASDQASYITGSTL 241

Query: 240 CVDGGVTV 247
            VDGG TV
Sbjct: 242 VVDGGWTV 249

Length = 520

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score =  147 bits (373), Expect = 2e-43
 Identities = 84/247 (34%), Positives = 121/247 (48%), Gaps = 6/247 (2%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE-LDARLHEWKNKGFKVTGSVCDLSS 60
            ALVTG + GIG A    LA  GA V    R++ +  +  + E K  G K      D+S 
Sbjct: 5   VALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEEIKAVGGKAIAVQADVSK 64

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
            E    L ++    F G L+IL+NNA +     + ++T ED + V   N    F  ++ A
Sbjct: 65  EEDVVALFQSAIKEF-GTLDILVNNAGLQGDASSHEMTLEDWNKVIDVNLTGQFLCAREA 123

Query: 121 HPLFKAS-GNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
              F+ S   G I+ +SSV      P    Y A KG +  +TK LA E+A   IR N +A
Sbjct: 124 IKRFRKSKIKGKIINMSSVHEKIPWPGHVNYAASKGGVKMMTKTLAQEYAPKGIRVNAIA 183

Query: 180 PWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
           P  I T +     + PE       +    P+GR GEP+E+++  A+L    ASY+TG  +
Sbjct: 184 PGAINTPINAEAWDDPEQ---RADLLSLIPMGRIGEPEEIAAAAAWLASDEASYVTGTTL 240

Query: 240 CVDGGVT 246
            VDGG+T
Sbjct: 241 FVDGGMT 247

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score =  145 bits (367), Expect = 8e-43
 Identities = 84/247 (34%), Positives = 130/247 (52%), Gaps = 14/247 (5%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           A+VTGG  GIG A    LA+ GA V          +A     +  G +  G  C+++S +
Sbjct: 2   AIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGGQAIGLECNVTSEQ 61

Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKP-TVDITAEDMSTVSSTNFESVFHLSQLAH 121
             E +++   S F G + IL+NNA     KP  + +T ED       N  S F LSQL  
Sbjct: 62  DLEAVVKATVSQF-GGITILVNNAGGGGPKPFDMPMTEEDFEWAFKLNLFSAFRLSQLCA 120

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P  + +G G+I+ ISS+        ++ YG+ K A+N +T+NLA +     IR N VAP 
Sbjct: 121 PHMQKAGGGAILNISSMSSENKNVRIAAYGSSKAAVNHMTRNLAFDLGPKGIRVNAVAPG 180

Query: 182 VIKT----SMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ 237
            +KT    S++ P  E          + + TP+GR GEP+++++   FLC PA+++++GQ
Sbjct: 181 AVKTDALASVLTPEIE--------RAMLKHTPLGRLGEPEDIANAALFLCSPASAWVSGQ 232

Query: 238 IICVDGG 244
           ++ V GG
Sbjct: 233 VLTVSGG 239

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score =  145 bits (367), Expect = 1e-42
 Identities = 89/250 (35%), Positives = 128/250 (51%), Gaps = 12/250 (4%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF---KVTGSVCDL 58
            A++TG + GIG  T    AR GA +    R+   L+         G    K+   V DL
Sbjct: 5   VAIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLVVADL 64

Query: 59  SSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQ 118
           +  E ++++I T  + F G+L+IL+NNA I       D   E+   V + N  +V +L++
Sbjct: 65  TEEEGQDRIISTTLAKF-GRLDILVNNAGILAKGGGEDQDIEEYDKVMNLNLRAVIYLTK 123

Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
           LA P    +  G IV +SSV G R  P V  Y   K A++Q T+  A E A   +R N+V
Sbjct: 124 LAVPHLIKT-KGEIVNVSSVAGGRSFPGVLYYCISKAALDQFTRCTALELAPKGVRVNSV 182

Query: 179 APWVIKT----SMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYI 234
           +P VI T     M  P E   +  +FL       P+GR G  DEV+  +AFL   A+S+I
Sbjct: 183 SPGVIVTGFHRRMGMPEE---QYIKFLSRAKETHPLGRPGTVDEVAEAIAFLASDASSFI 239

Query: 235 TGQIICVDGG 244
           TGQ++ VDGG
Sbjct: 240 TGQLLPVDGG 249

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score =  144 bits (366), Expect = 2e-42
 Identities = 78/248 (31%), Positives = 126/248 (50%), Gaps = 5/248 (2%)

Query: 3   ALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           ALVTG +RGIG A    LA  G  I    +R++   +    E +  G K      ++   
Sbjct: 7   ALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDV 66

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           E+ +++   +   F G+L++ +NNAA   ++P +++         + N +++   +Q A 
Sbjct: 67  EKIKEMFAQIDEEF-GRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAA 125

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
            L +  G G I+ +SS+G +R + + +  G  K A+  LT+ LA E A   I  N V+  
Sbjct: 126 KLMEKVGGGKIISLSSLGSIRYLENYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGG 185

Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
            + T  +K F   P   E L+    +TP GR  EP++V++ V FLC P A  I GQ I V
Sbjct: 186 AVDTDALKHF---PNREELLEDARAKTPAGRMVEPEDVANAVLFLCSPEADMIRGQTIIV 242

Query: 242 DGGVTVTV 249
           DGG ++ V
Sbjct: 243 DGGRSLLV 250

Length = 250

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score =  144 bits (365), Expect = 3e-42
 Identities = 74/246 (30%), Positives = 114/246 (46%), Gaps = 4/246 (1%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            ALVTG  RG+G      LA  GA V    RN   L+A +   +  G        D++  
Sbjct: 13  VALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADE 72

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           E        + +   G+L+IL+NN      +P  ++    +  +  T+  +   LS+LA 
Sbjct: 73  EAVAAAFARIDAE-HGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAA 131

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
              K  G G I+ I+S+ G       ++Y A K  +  L + LA E+    I +N +AP 
Sbjct: 132 QRMKRQGYGRIIAITSIAGQVARAGDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPG 191

Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
              T         P    +L   A++TP+GR G P+E++    FL  PAASY+ G ++ V
Sbjct: 192 YFATETNAAMAADPAVGPWL---AQRTPLGRWGRPEEIAGAAVFLASPAASYVNGHVLAV 248

Query: 242 DGGVTV 247
           DGG +V
Sbjct: 249 DGGYSV 254

Length = 256

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score =  143 bits (363), Expect = 7e-42
 Identities = 83/249 (33%), Positives = 125/249 (50%), Gaps = 12/249 (4%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQ--IELDARLHEWKNKGFKVTGSVCDLS 59
            A+VTGG  GIGHA  E  A  GA V    R++   E+ A+L     KG      VCD+S
Sbjct: 17  VAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGL-----VCDVS 71

Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
             +  E  +  V S F G+++IL+N+A +A + P  D++ ED       N +  F ++Q 
Sbjct: 72  DSQSVEAAVAAVISAF-GRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQA 130

Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
                 A+G G IV ++S  GV  +     Y A K  +  +TK LA EW    I  N ++
Sbjct: 131 VGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKAGVVGMTKVLALEWGPYGITVNAIS 190

Query: 180 PWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
           P V+ T + K    G +G    +   +  P GR   P+E+++   FL   AA+ ITG+ +
Sbjct: 191 PTVVLTELGKKAWAGEKG----ERAKKLIPAGRFAYPEEIAAAALFLASDAAAMITGENL 246

Query: 240 CVDGGVTVT 248
            +DGG T+ 
Sbjct: 247 VIDGGYTIQ 255

Length = 255

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score =  143 bits (362), Expect = 7e-42
 Identities = 71/244 (29%), Positives = 108/244 (44%), Gaps = 14/244 (5%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             LVTGGTRGIG          GA V  C R   E           G        D+   
Sbjct: 8   VVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPETVD--------GRPAEFHAADVRDP 59

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           +Q   L++ +     G+L++L+NNA  +      + +      +   N  +   ++Q A+
Sbjct: 60  DQVAALVDAIVERH-GRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAAN 118

Query: 122 PLFKA-SGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
            + +   G GSIV I SV G R  P  + YGA K  +  LT++LA EWA   +R N V  
Sbjct: 119 AVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKAGLLNLTRSLAVEWAPK-VRVNAVVV 177

Query: 181 WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
            +++T   +      EG   +  +A   P+GR   P +++    FL    ASY++G  + 
Sbjct: 178 GLVRTEQSELHYGDAEG---IAAVAATVPLGRLATPADIAWACLFLASDLASYVSGANLE 234

Query: 241 VDGG 244
           V GG
Sbjct: 235 VHGG 238

Length = 252

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score =  143 bits (361), Expect = 1e-41
 Identities = 80/246 (32%), Positives = 122/246 (49%), Gaps = 14/246 (5%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           A++TG   GIG       A  GA V     N    +  + E +  G +     CD++S +
Sbjct: 14  AIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQ 73

Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
           +   L +   S   GK++IL+NNA     KP  D+   D       N  S FHLSQL  P
Sbjct: 74  ELSALADFALSKL-GKVDILVNNAGGGGPKP-FDMPMADFRRAYELNVFSFFHLSQLVAP 131

Query: 123 LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWV 182
             + +G G I+ I+S+       +++ Y + K A + L +N+A +  + NIR N +AP  
Sbjct: 132 EMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGA 191

Query: 183 IKT----SMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI 238
           I T    S+I P        E    + + TPI R G+P ++++   FLC PAAS+++GQI
Sbjct: 192 ILTDALKSVITP--------EIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQI 243

Query: 239 ICVDGG 244
           + V GG
Sbjct: 244 LTVSGG 249

Length = 255

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score =  141 bits (358), Expect = 2e-41
 Identities = 80/247 (32%), Positives = 116/247 (46%), Gaps = 13/247 (5%)

Query: 2   TALVTGGTRGIGHATVEELARFG----AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCD 57
            ALVTG  RGIG A   EL   G    A   + +    +        +++       V D
Sbjct: 4   IALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTD 63

Query: 58  LSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLS 117
                +    IE      +G ++IL+NNA I        ++ ++ + V +TN  SVF+++
Sbjct: 64  TEECAEALAEIEEE----EGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVT 119

Query: 118 QLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
           Q         G G I+ ISSV G++G    + Y A K  M   TK LA E A+  I  N 
Sbjct: 120 QPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIGFTKALASEGARYGITVNC 179

Query: 178 VAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ 237
           +AP  I T M+        G E L  I  Q P+ R G P+E+++ VAFL   AA +ITG+
Sbjct: 180 IAPGYIATPMV-----EQMGPEVLQSIVNQIPMKRLGTPEEIAAAVAFLVSEAAGFITGE 234

Query: 238 IICVDGG 244
            I ++GG
Sbjct: 235 TISINGG 241

Length = 245

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score =  142 bits (359), Expect = 2e-41
 Identities = 89/245 (36%), Positives = 121/245 (49%), Gaps = 9/245 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
            A+VTGG  G+G      LA+ GA I+ T      +   RL E   +G KVT    DL+ 
Sbjct: 17  VAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIE--KEGRKVTFVQVDLTK 74

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
            E  EK+++     F GK++IL+NNA      P ++   ED + V   N  SV+HLSQ  
Sbjct: 75  PESAEKVVKEALEEF-GKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAV 133

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
             +    G+G I+ I+S+   +G   V  Y A K  +  LTK  A E A  NI+ N +AP
Sbjct: 134 AKVMAKQGSGKIINIASMLSFQGGKFVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAP 193

Query: 181 WVIKTSMIKPFEEGPE-GSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
             IKT+   P         E L  I    P GR GEPD++     FL   A+ Y+ G I+
Sbjct: 194 GYIKTANTAPIRADKNRNDEILKRI----PAGRWGEPDDLMGAAVFLASRASDYVNGHIL 249

Query: 240 CVDGG 244
            VDGG
Sbjct: 250 AVDGG 254

Length = 258

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score =  141 bits (357), Expect = 4e-41
 Identities = 78/246 (31%), Positives = 110/246 (44%), Gaps = 3/246 (1%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            A+VTG   GIG AT +  AR GA V    R+    +         G +      D+ S 
Sbjct: 7   VAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGG-RAFARQGDVGSA 65

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           E  E L++ V + + G+L++L+NNA        V     D   V   N   VF  ++ A 
Sbjct: 66  EAVEALVDFVAARW-GRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAI 124

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P+ +  G GSIV  +S   + G    + Y A KGA+  LT+ +A + A D IR N VAP 
Sbjct: 125 PIMQRQGGGSIVNTASQLALAGGRGRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPG 184

Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQ-TPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
            I T   +         E L    R   P+ R G  +EV+    FL    +S+ TG  + 
Sbjct: 185 TIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAALFLASDESSFATGTTLV 244

Query: 241 VDGGVT 246
           VDGG  
Sbjct: 245 VDGGWL 250

Length = 252

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score =  139 bits (352), Expect = 2e-40
 Identities = 81/253 (32%), Positives = 114/253 (45%), Gaps = 8/253 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           TALVTG   GIG A    LA  GA V      +   +A      + G  V     D++  
Sbjct: 3   TALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDAGGSVIYLPADVTKE 62

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           ++   +I    + F G L+IL+NNA I  V P  +   ED   + +    S FH  + A 
Sbjct: 63  DEIADMIAAAAAEF-GGLDILVNNAGIQHVAPIEEFPPEDWDRIIAVMLTSAFHTIRAAL 121

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P  K  G G I+ I+S  G+   P  S Y A K  +  LTK LA E A+  I  N + P 
Sbjct: 122 PHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLIGLTKVLALEVAEHGITVNAICPG 181

Query: 182 VIKTSMI-KPFEEG------PEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYI 234
            ++T ++ K   +       PE     + + +  P  R    DEV+    +L   AA+ I
Sbjct: 182 YVRTPLVEKQIADQAKTRGIPEEQVIREVMLKGQPTKRFVTVDEVAETALYLASDAAAQI 241

Query: 235 TGQIICVDGGVTV 247
           TGQ I +DGG T 
Sbjct: 242 TGQAIVLDGGWTA 254

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  139 bits (352), Expect = 3e-40
 Identities = 74/253 (29%), Positives = 107/253 (42%), Gaps = 8/253 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            ALVTG   GIG      LA+ GA V     N     A     +  G K  G   D++  
Sbjct: 6   VALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDE 65

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           E     I+     F G ++IL+NNA I  V P  D   E    + +   +  F  ++ A 
Sbjct: 66  EAINAGIDYAVETF-GGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAAL 124

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P+ KA G G I+ ++SV G+ G    + Y + K  +  LTK +A E A   +  N + P 
Sbjct: 125 PIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPG 184

Query: 182 VIKTSMI-KPFEEG------PEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYI 234
            + T ++ K   +        E     D +    P  R    +E++    FL   AA  +
Sbjct: 185 YVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIADYALFLASFAAKGV 244

Query: 235 TGQIICVDGGVTV 247
           TGQ   VDGG T 
Sbjct: 245 TGQAWVVDGGWTA 257

Length = 258

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score =  138 bits (350), Expect = 7e-40
 Identities = 73/245 (29%), Positives = 118/245 (48%), Gaps = 6/245 (2%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           A+VTG  RG+G A     A  GA V   +R + +LD    + +  G +      DL+  E
Sbjct: 13  AVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPE 72

Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
               L       F G+L+I++NN       P +  + +D++   + N  +   L+  A P
Sbjct: 73  ATAGLAGQAVEAF-GRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVP 131

Query: 123 L-FKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           L  + SG GS++ ISS  G       + YG  K A+   T+  A +     IR N +AP 
Sbjct: 132 LMLEHSGGGSVINISSTMGRLAGRGFAAYGTAKAALAHYTRLAALDLCP-RIRVNAIAPG 190

Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
            I TS ++      E       + + TP+ R G+P+++++   +L  PA SY+TG+ + V
Sbjct: 191 SILTSALEVVAANDE---LRAPMEKATPLRRLGDPEDIAAAAVYLASPAGSYLTGKTLEV 247

Query: 242 DGGVT 246
           DGG+T
Sbjct: 248 DGGLT 252

Length = 263

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score =  137 bits (347), Expect = 1e-39
 Identities = 87/258 (33%), Positives = 124/258 (48%), Gaps = 28/258 (10%)

Query: 2   TALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKGFKVTGSVC--- 56
            AL+TGG R IG A    L   G    +H   R+  E DA   E         GS     
Sbjct: 8   VALITGGARRIGAAIARTLHAAGYRVAIH-YHRSAAEADALAAELNALR---PGSAAALQ 63

Query: 57  -DLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFH 115
            DL   +   +L+    + F G+L+ L+NNA+  +  P   IT      + ++N ++ F 
Sbjct: 64  ADLLDPDALPELVAACVAAF-GRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFF 122

Query: 116 LSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
           LSQ A P  +    G+IV I+ +   R +    +Y A K A+  LT++LA E A + +R 
Sbjct: 123 LSQAAAPQLRKQ-RGAIVNITDIHAERPLKGYPVYCAAKAALEMLTRSLALELAPE-VRV 180

Query: 176 NTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQ-----TPIGRAGEPDEVSSLVAFLCLPA 230
           N VAP  I           PE     D  ARQ     TP+ R G P++++  V FL L  
Sbjct: 181 NAVAPGAI---------LWPEDGNSFDEEARQAILARTPLKRIGTPEDIAEAVRFL-LAD 230

Query: 231 ASYITGQIICVDGGVTVT 248
           AS+ITGQI+ VDGG ++T
Sbjct: 231 ASFITGQILAVDGGRSLT 248

Length = 249

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score =  136 bits (343), Expect = 4e-39
 Identities = 86/247 (34%), Positives = 134/247 (54%), Gaps = 15/247 (6%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVC-DLSSR 61
           ALVTG  +GIG ATV+ LA+ GA V   SR Q +LD+ + E    G +    VC DLS  
Sbjct: 10  ALVTGAGKGIGRATVKALAKAGARVVAVSRTQADLDSLVRE--CPGIE---PVCVDLSDW 64

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           +  E+ + +V     G +++L+NNAA+A ++P +++T E        N  +V H+SQ+  
Sbjct: 65  DATEEALGSV-----GPVDLLVNNAAVAILQPFLEVTKEAFDRSFDVNVRAVIHVSQIVA 119

Query: 122 PLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
               A G  GSIV +SS    R + + ++Y + K A++ LTK +A E     IR N+V P
Sbjct: 120 RGMIARGVPGSIVNVSSQASQRALTNHTVYCSTKAALDMLTKVMALELGPHKIRVNSVNP 179

Query: 181 WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
            V+ T M +     PE ++ +  + R  P+G+  E ++V + + FL    +S  TG  + 
Sbjct: 180 TVVMTDMGRDNWSDPEKAKKM--LNR-IPLGKFAEVEDVVNAILFLLSDKSSMTTGSTLP 236

Query: 241 VDGGVTV 247
           VDGG   
Sbjct: 237 VDGGFLA 243

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  141 bits (356), Expect = 9e-39
 Identities = 83/248 (33%), Positives = 126/248 (50%), Gaps = 13/248 (5%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELD--ARLHEWKNKGFKVTGSVCDLS 59
              +TGG RGIG A  +  A  G  +    R+       A     ++   +      D++
Sbjct: 271 VVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQA-----DIT 325

Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFV-KPTVDITAEDMSTVSSTNFESVFHLSQ 118
                E     + + + G+L++L+NNA IA V KP+++ +AED + V   N    F  ++
Sbjct: 326 DEAAVESAFAQIQARW-GRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACAR 384

Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
            A      S  G IV + S+  +  +P  + Y A K A+  L+++LACEWA   IR NTV
Sbjct: 385 AA--ARLMSQGGVIVNLGSIASLLALPPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTV 442

Query: 179 APWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI 238
           AP  I+T  +   +    G    D I R+ P+GR G+P+EV+  +AFL  PAASY+ G  
Sbjct: 443 APGYIETPAVLALKAS--GRADFDSIRRRIPLGRLGDPEEVAEAIAFLASPAASYVNGAT 500

Query: 239 ICVDGGVT 246
           + VDGG T
Sbjct: 501 LTVDGGWT 508

Length = 520

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score =  135 bits (343), Expect = 1e-38
 Identities = 89/255 (34%), Positives = 129/255 (50%), Gaps = 19/255 (7%)

Query: 1   MTALVTGGTRGIGHATVEELARFGA---IVHTCSRNQIELDARLHEWKN-KGFKVTGSVC 56
             AL+TGG  GIG A     A+ GA   IV+           +  E +  K   + G V 
Sbjct: 47  KVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVS 106

Query: 57  DLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPT---VDITAEDMSTVSSTNFESV 113
           D      ++ + ETV  +  G+L+IL+NNAA  F  P     DITAE +     TN  S 
Sbjct: 107 D--EAFCKDAVEETVREL--GRLDILVNNAA--FQYPQQSLEDITAEQLDKTFKTNIYSY 160

Query: 114 FHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNI 173
           FH+++ A P  K  G  +I+   S+ G  G  ++  Y A KGA++  T++LA    +  I
Sbjct: 161 FHMTKAALPHLK-QG-SAIINTGSITGYEGNETLIDYSATKGAIHAFTRSLAQSLVQKGI 218

Query: 174 RTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASY 233
           R N VAP  I T +I    +  + S+F       TP+ R G+P+E++    FL  P +SY
Sbjct: 219 RVNAVAPGPIWTPLIPSDFDEEKVSQF----GSNTPMQRPGQPEELAPAYVFLASPDSSY 274

Query: 234 ITGQIICVDGGVTVT 248
           ITGQ++ V+GGV V 
Sbjct: 275 ITGQMLHVNGGVIVN 289

Length = 290

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score =  134 bits (340), Expect = 1e-38
 Identities = 77/250 (30%), Positives = 120/250 (48%), Gaps = 12/250 (4%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            A+VTG   G G       A+ GA V     N    +    +       +     D++ R
Sbjct: 7   VAIVTGAGSGFGEGIARRFAQEGARVVIADINADGAERVAADIGEAAIAIQ---ADVTKR 63

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFV-KPTVDITAEDMSTVSSTNFESVFHLSQLA 120
              E ++E   S F G+L+IL+NNA I    KP +++  E+   V + N +S++  +Q  
Sbjct: 64  ADVEAMVEAALSKF-GRLDILVNNAGITHRNKPMLEVDEEEFDRVFAVNVKSIYLSAQAL 122

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
            P  +  G G I+ I+S  G+R  P ++ Y A KG +   TK +A E A  NIR N + P
Sbjct: 123 VPHMEEQGGGVIINIASTAGLRPRPGLTWYNASKGWVVTATKAMAVELAPRNIRVNCLCP 182

Query: 181 WVIKTSMIKPF--EEGPEGSE-FLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ 237
              +T ++  F  E+ PE    F   I    P+GR   PD++++   +L    AS+ITG 
Sbjct: 183 VAGETPLLSMFMGEDTPENRAKFRATI----PLGRLSTPDDIANAALYLASDEASFITGV 238

Query: 238 IICVDGGVTV 247
            + VDGG  +
Sbjct: 239 ALEVDGGRCI 248

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score =  133 bits (337), Expect = 3e-38
 Identities = 77/248 (31%), Positives = 112/248 (45%), Gaps = 10/248 (4%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             LVTGG+RGIG    +     GA V   +R          E    G +      DLSS 
Sbjct: 8   IVLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEELSAYG-ECIAIPADLSSE 66

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           E  E L+  V      +L++L+NNA   +  P           V   N +SVF L+Q   
Sbjct: 67  EGIEALVARVAERSD-RLDVLVNNAGATWGAPLEAFPESGWDKVMDINVKSVFFLTQALL 125

Query: 122 PLFKASGN----GSIVFISSVGGVRGIPSVSL-YGAYKGAMNQLTKNLACEWAKDNIRTN 176
           PL +A+        ++ I S+ G+      +  YGA K A++QLT+ LA E A ++I  N
Sbjct: 126 PLLRAAATAENPARVINIGSIAGIVVSGLENYSYGASKAAVHQLTRKLAKELAGEHITVN 185

Query: 177 TVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG 236
            +AP    + M       P   E      +  P+GR G P++++ L   L   A +Y+TG
Sbjct: 186 AIAPGRFPSKMTAFLLNDPAALE---AEEKSIPLGRWGRPEDMAGLAIMLASRAGAYLTG 242

Query: 237 QIICVDGG 244
            +I VDGG
Sbjct: 243 AVIPVDGG 250

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score =  133 bits (337), Expect = 4e-38
 Identities = 77/258 (29%), Positives = 116/258 (44%), Gaps = 26/258 (10%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF-KVTGSVCDLSS 60
             L+TG    IG A  + L   GA +     N   L+    E  N    +V     D++S
Sbjct: 4   IILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLYKNRVIALELDITS 63

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAF---VKPTVDITAEDMSTVSSTNFESVFHLS 117
           +E  ++LIE+    F G+++ILINNA  +         +   E  + V + N    F  S
Sbjct: 64  KESIKELIESYLEKF-GRIDILINNAYPSPKVWGSRFEEFPYEQWNEVLNVNLGGAFLCS 122

Query: 118 QLAHPLFKASGNGSIVFISSVGGVRGIPSVSL-----------YGAYKGAMNQLTKNLAC 166
           Q    LFK  G GSI+ I+S+ GV   P   +           Y   K  +  LTK LA 
Sbjct: 123 QAFIKLFKKQGKGSIINIASIYGVIA-PDFRIYENTQMYSPVEYSVIKAGIIHLTKYLAK 181

Query: 167 EWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFL 226
            +A   IR N ++P  I            + SEFL+   ++ P+ R   P+++   + FL
Sbjct: 182 YYADTGIRVNAISPGGILN---------NQPSEFLEKYTKKCPLKRMLNPEDLRGAIIFL 232

Query: 227 CLPAASYITGQIICVDGG 244
              A+SY+TGQ + +DGG
Sbjct: 233 LSDASSYVTGQNLVIDGG 250

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score =  133 bits (337), Expect = 4e-38
 Identities = 82/247 (33%), Positives = 128/247 (51%), Gaps = 4/247 (1%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           ALVTG ++GIG+A  E LA+ GA V    R+  +L A     K +G        D++  +
Sbjct: 13  ALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHD 72

Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
                I+   +   G ++IL+NNA + F  P  D  A+    +  TN  SVF++ Q    
Sbjct: 73  AVRAAIDAFEAEI-GPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVAR 131

Query: 123 LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWV 182
              A G G I+ I+SV      P ++ Y A KGA+  LTK +A +WAK  ++ N +AP  
Sbjct: 132 HMIARGAGKIINIASVQSALARPGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGY 191

Query: 183 IKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 242
             T +       PE S +L+   ++TP GR G+ +E+     FL   A+S++ G ++ VD
Sbjct: 192 FDTPLNAALVADPEFSAWLE---KRTPAGRWGKVEELVGACVFLASDASSFVNGHVLYVD 248

Query: 243 GGVTVTV 249
           GG+T ++
Sbjct: 249 GGITASL 255

Length = 255

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score =  132 bits (335), Expect = 6e-38
 Identities = 79/250 (31%), Positives = 116/250 (46%), Gaps = 18/250 (7%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           + LVTG + GIG A    LA+ GA V   +RN   LD    E   +  ++     D+   
Sbjct: 11  SVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRL-----DVGDD 65

Query: 62  E-QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQ-L 119
              R  L         G  + L+N A IA ++  +D+TAE    V + N      +++ +
Sbjct: 66  AAIRAALAA------AGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHV 119

Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
           A  +  A   GSIV +SS   + G+P    Y A K A++ +T+ L  E     IR N+V 
Sbjct: 120 ARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAALDAITRVLCVELGPHGIRVNSVN 179

Query: 180 PWVIKTSMIKPFEEGPEGSE-FLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI 238
           P V  T M       P+ S   L  I    P+GR  E D+V++ + FL   AAS ++G  
Sbjct: 180 PTVTLTPMAAEAWSDPQKSGPMLAAI----PLGRFAEVDDVAAPILFLLSDAASMVSGVS 235

Query: 239 ICVDGGVTVT 248
           + VDGG T  
Sbjct: 236 LPVDGGYTAR 245

Length = 245

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score =  133 bits (336), Expect = 6e-38
 Identities = 83/251 (33%), Positives = 126/251 (50%), Gaps = 15/251 (5%)

Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK--NKGFKVTGSVCDLSSR 61
           L+TGG  G+G AT   LA+ GA +     N+  L+A            +V     D+S  
Sbjct: 7   LITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPDAEVLLIKADVSDE 66

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVK-PTVDITAEDMSTVSSTNFESVFHLSQLA 120
            Q E  ++     F G+++   NNA I   +  T D  A++   V S N   VF+  +  
Sbjct: 67  AQVEAYVDATVEQF-GRIDGFFNNAGIEGKQNLTEDFGADEFDKVVSINLRGVFYGLEKV 125

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
             + +  G+G IV  +SVGG+RG+ + S Y A K  +  LT+N A E+ +  IR N +AP
Sbjct: 126 LKVMREQGSGMIVNTASVGGIRGVGNQSGYAAAKHGVVGLTRNSAVEYGQYGIRINAIAP 185

Query: 181 WVIKTSMIK-PFEE-GPE-----GSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASY 233
             I T M++   ++ GPE     G EF        P+ R GEP+EV+++VAFL    A Y
Sbjct: 186 GAILTPMVEGSLKQLGPENPEEAGEEF----VSVNPMKRFGEPEEVAAVVAFLLSDDAGY 241

Query: 234 ITGQIICVDGG 244
           +   ++ +DGG
Sbjct: 242 VNAAVVPIDGG 252

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score =  139 bits (354), Expect = 7e-38
 Identities = 77/257 (29%), Positives = 107/257 (41%), Gaps = 20/257 (7%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           ALVTG   GIG AT + LA  GA V     ++   +A   E      +  G  CD++   
Sbjct: 425 ALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPD-RALGVACDVTDEA 483

Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
             +   E     F G ++I+++NA IA   P  + + ED       N    F +++ A  
Sbjct: 484 AVQAAFEEAALAF-GGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVR 542

Query: 123 LFKASGNG-SIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP- 180
           + KA G G SIVFI+S   V   P+   YGA K A   L + LA E   D IR N V P 
Sbjct: 543 IMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPD 602

Query: 181 ------------WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCL 228
                       W+   +      E      +      +  +     P++V+  V FL  
Sbjct: 603 AVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREV----TPEDVAEAVVFLAS 658

Query: 229 PAASYITGQIICVDGGV 245
              S  TG II VDGG 
Sbjct: 659 GLLSKTTGAIITVDGGN 675

Length = 681

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score =  132 bits (334), Expect = 1e-37
 Identities = 88/255 (34%), Positives = 122/255 (47%), Gaps = 20/255 (7%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           ALVTG  +GIG A  + L   G  V     N+    A   +    G K      D+S R+
Sbjct: 5   ALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRD 64

Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
           Q    +  V   F G LN+++NNA +A   P   IT E    V + N   V    Q A  
Sbjct: 65  QVFAAVRQVVDTF-GDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQE 123

Query: 123 LFKASGNG-SIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
            FK  G+G  I+  +S  GV G P +++Y + K A+  LT+  A + A + I  N  AP 
Sbjct: 124 AFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPG 183

Query: 182 VIKTSMI------------KPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLP 229
           ++KT M+            KP E G E  +F   I     +GR  EP++V++ V+FL  P
Sbjct: 184 IVKTPMMFDIAHQVGENAGKPDEWGME--QFAKDIT----LGRLSEPEDVANCVSFLAGP 237

Query: 230 AASYITGQIICVDGG 244
            + YITGQ I VDGG
Sbjct: 238 DSDYITGQTIIVDGG 252

Length = 256

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score =  132 bits (333), Expect = 1e-37
 Identities = 86/247 (34%), Positives = 121/247 (48%), Gaps = 15/247 (6%)

Query: 3   ALVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHEWKNK----GFKVTGSVCD 57
           ALVTGG  GIG A  + LA+ G  +   C  N    + R   W  +    GF       D
Sbjct: 3   ALVTGGMGGIGTAICQRLAKDGYRVAANCGPN----EERAEAWLQEQGALGFDFRVVEGD 58

Query: 58  LSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLS 117
           +SS E  +  +  V +   G +++L+NNA I        +T E  S V  TN  SVF+++
Sbjct: 59  VSSFESCKAAVAKVEAE-LGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVT 117

Query: 118 QLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
           Q      +  G G I+ ISSV G +G    + Y A K  M   TK LA E A   +  NT
Sbjct: 118 QPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIGFTKALAQEGATKGVTVNT 177

Query: 178 VAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ 237
           ++P  I T M+    E     + L+ I  Q P+GR G P+E+++ VAFL    A YITG 
Sbjct: 178 ISPGYIATDMVMAMRE-----DVLNSIVAQIPVGRLGRPEEIAAAVAFLASEEAGYITGA 232

Query: 238 IICVDGG 244
            + ++GG
Sbjct: 233 TLSINGG 239

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score =  131 bits (332), Expect = 3e-37
 Identities = 81/266 (30%), Positives = 119/266 (44%), Gaps = 33/266 (12%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             +VTGG+ GIG A V+EL   GA V         ++A +H    +         D+SS 
Sbjct: 11  IIIVTGGSSGIGLAIVKELLANGANV---------VNADIHGGDGQHENYQFVPTDVSSA 61

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD---------ITAEDMSTVSSTNFES 112
           E+    +  +   F G+++ L+NNA I   +  VD         +       + + N + 
Sbjct: 62  EEVNHTVAEIIEKF-GRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKG 120

Query: 113 VFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDN 172
           VF +SQ          +G IV +SS  G+ G    S Y A K A+N  T++ A E  K N
Sbjct: 121 VFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQSCYAATKAALNSFTRSWAKELGKHN 180

Query: 173 IRTNTVAPWVI-KTSMIKPFEEGPEGSEFLDGIARQ-----------TPIGRAGEPDEVS 220
           IR   VAP ++  T +  P  E  E   +  GI  +            P+GR+G+  EV+
Sbjct: 181 IRVVGVAPGILEATGLRTPEYE--EALAYTRGITVEQLRAGYTKTSTIPLGRSGKLSEVA 238

Query: 221 SLVAFLCLPAASYITGQIICVDGGVT 246
            LV +L    ASYITG    + GG T
Sbjct: 239 DLVCYLLSDRASYITGVTTNIAGGKT 264

Length = 266

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score =  131 bits (330), Expect = 4e-37
 Identities = 85/247 (34%), Positives = 114/247 (46%), Gaps = 11/247 (4%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           A+VTG   GIG A    LAR GA V   +   I+  A                 D++  +
Sbjct: 6   AIVTGAGAGIGAACAARLAREGARV-VVA--DIDGGAAQAVVAQIAGGALALRVDVTDEQ 62

Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTV-DITAEDMSTVSSTNFESVFHLSQLAH 121
           Q   L E     F G L++L+NNA    + P + D          + N    F   + A 
Sbjct: 63  QVAALFERAVEEF-GGLDLLVNNAGAMHLTPAIIDTDLAVWDQTMAINLRGTFLCCRHAA 121

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P   A G GSIV +SS+ G  G P    YGA K A+  LT+ LA E     IR N +AP 
Sbjct: 122 PRMIARGGGSIVNLSSIAGQSGDPGYGAYGASKAAIRNLTRTLAAELRHAGIRCNALAPG 181

Query: 182 VIKTSMIK---PFEEGPEGS-EFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ 237
           +I T ++       EG  G   F   I +    GR G P++V++ V FL    AS+ITGQ
Sbjct: 182 LIDTPLLLAKLAGFEGALGPGGFHLLIHQLQ--GRLGRPEDVAAAVVFLLSDDASFITGQ 239

Query: 238 IICVDGG 244
           ++CVDGG
Sbjct: 240 VLCVDGG 246

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score =  129 bits (325), Expect = 2e-36
 Identities = 78/252 (30%), Positives = 118/252 (46%), Gaps = 9/252 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            ALVTG T GIG A    L + G  V  C+R +  L   + E +  G +  G  CD+ S 
Sbjct: 5   VALVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKELREAGVEADGRTCDVRSV 64

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQ--L 119
            + E L+    + + G +++L+NNA  +    T ++  E    V  TN   VF +++  L
Sbjct: 65  PEIEALVAAAVARY-GPIDVLVNNAGRSGGGATAELADELWLDVVETNLTGVFRVTKEVL 123

Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
                   G G I+ I+S GG +G+   + Y A K  +   TK L  E A+  I  N V 
Sbjct: 124 KAGGMLERGTGRIINIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVC 183

Query: 180 PWVIKTSMIKPFEEGPEG------SEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASY 233
           P  ++T M     E           E  D I  + P+GR   P+EV+ +VA+L    A+ 
Sbjct: 184 PGFVETPMAASVREHYADIWEVSTEEAFDRITARVPLGRYVTPEEVAGMVAYLIGDGAAA 243

Query: 234 ITGQIICVDGGV 245
           +T Q + V GG+
Sbjct: 244 VTAQALNVCGGL 255

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score =  128 bits (324), Expect = 5e-36
 Identities = 91/252 (36%), Positives = 127/252 (50%), Gaps = 16/252 (6%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDAR-----LHEWKNKGFKVTGSVC 56
            AL+TGG  GIG A     AR GA V      + E DA      + E   K   + G   
Sbjct: 28  KALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETKKLIEEEGRKCLLIPG--- 84

Query: 57  DLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTV-DITAEDMSTVSSTNFESVFH 115
           DL        L++ V   F GKL+IL+NNAA    + ++ DIT E +     TN  S+F+
Sbjct: 85  DLGDESFCRDLVKEVVKEF-GKLDILVNNAAYQHPQESIEDITTEQLEKTFRTNIFSMFY 143

Query: 116 LSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
           L++ A P  K     SI+  +SV   +G P +  Y A KGA+   T+ L+ + A+  IR 
Sbjct: 144 LTKAALPHLKKGS--SIINTTSVTAYKGSPHLLDYAATKGAIVAFTRGLSLQLAEKGIRV 201

Query: 176 NTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT 235
           N VAP  I T +I      PE  E +     Q P+GRAG+P EV+    FL    +SY+T
Sbjct: 202 NAVAPGPIWTPLIP--SSFPE--EKVSEFGSQVPMGRAGQPAEVAPAYVFLASQDSSYVT 257

Query: 236 GQIICVDGGVTV 247
           GQ++ V+GG  +
Sbjct: 258 GQVLHVNGGEII 269

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score =  127 bits (322), Expect = 5e-36
 Identities = 80/248 (32%), Positives = 117/248 (47%), Gaps = 15/248 (6%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            ALVTG   G+G      LA  GA +    R+  E      + +  G +      DLS  
Sbjct: 7   VALVTGANTGLGQGIAVGLAEAGADIVGAGRS--EPSETQQQVEALGRRFLSLTADLSDI 64

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           E  + L+++    F G ++IL+NNA I       + + +D   V + N +SVF L+Q A 
Sbjct: 65  EAIKALVDSAVEEF-GHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAA 123

Query: 122 PLFKASGN-GSIVFISSV----GGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTN 176
             F   G  G I+ I+S+    GG+R +PS   Y A K A+  LTK LA EWA   I  N
Sbjct: 124 KHFLKQGRGGKIINIASMLSFQGGIR-VPS---YTASKHAVAGLTKLLANEWAAKGINVN 179

Query: 177 TVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG 236
            +AP  + T+  +      + +     I  + P GR G PD++     FL   A+ Y+ G
Sbjct: 180 AIAPGYMATNNTQALRADEDRNA---AILERIPAGRWGTPDDIGGPAVFLASSASDYVNG 236

Query: 237 QIICVDGG 244
             + VDGG
Sbjct: 237 YTLAVDGG 244

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score =  127 bits (321), Expect = 9e-36
 Identities = 76/249 (30%), Positives = 116/249 (46%), Gaps = 12/249 (4%)

Query: 2   TALVTGGTRGIGHATVEELARFG---AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDL 58
            A+VT    GIG A    LA+ G    I         +  A   E ++ G +      DL
Sbjct: 4   VAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAE--EVRSHGVRAEIRQLDL 61

Query: 59  SSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQ 118
           S   +  + ++ +     G++++L+NNA      P +D+  ++   + + + +  F  SQ
Sbjct: 62  SDLPEGAQALDKLIQRL-GRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQ 120

Query: 119 LA-HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
           +A   + K    G I+ I+SV     +P  S Y A K A+  LTK +A E  +  I  N 
Sbjct: 121 IAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHALGGLTKAMALELVEHGILVNA 180

Query: 178 VAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ 237
           VAP  I T M    +   +      GI    P+GR G+  E++SLVA+LC   ASY TGQ
Sbjct: 181 VAPGAIATPMNGMDDSDVKPDS-RPGI----PLGRPGDTHEIASLVAWLCSEGASYTTGQ 235

Query: 238 IICVDGGVT 246
            + VDGG  
Sbjct: 236 SLIVDGGFM 244

Length = 256

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score =  127 bits (321), Expect = 1e-35
 Identities = 80/252 (31%), Positives = 118/252 (46%), Gaps = 19/252 (7%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQI---ELDARLHEWKNKGFKVTGSVCDL 58
            A+VTGG   IG A    L   GA V     +      + A L      G +      D+
Sbjct: 8   VAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL------GERARFIATDI 61

Query: 59  SSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQ 118
           +     E+ + TV + F G+++IL+N A   ++   +  +  D       N  S   L+Q
Sbjct: 62  TDDAAIERAVATVVARF-GRVDILVNLACT-YLDDGLASSRADWLAALDVNLVSAAMLAQ 119

Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
            AHP     G G+IV  +S+          LY A K A+ QLT+++A + A D IR N+V
Sbjct: 120 AAHPHLARGG-GAIVNFTSISAKFAQTGRWLYPASKAAIRQLTRSMAMDLAPDGIRVNSV 178

Query: 179 AP-WVIKTSMIKPFEEGPEGS-EFLDGIARQT-PIGRAGEPDEVSSLVAFLCLPAASYIT 235
           +P W     M    +E   G     D +A     +GR G+P+EV+ +VAFLC  AAS++T
Sbjct: 179 SPGWTWSRVM----DELSGGDRAKADRVAAPFHLLGRVGDPEEVAQVVAFLCSDAASFVT 234

Query: 236 GQIICVDGGVTV 247
           G    VDGG + 
Sbjct: 235 GADYAVDGGYSA 246

Length = 261

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score =  127 bits (321), Expect = 1e-35
 Identities = 81/256 (31%), Positives = 128/256 (50%), Gaps = 8/256 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           TAL+TG  +GIG       AR GA +     +  E++    E   +G + T  V D+   
Sbjct: 8   TALITGALQGIGEGIARVFARHGANLILLDISP-EIEKLADELCGRGHRCTAVVADVRDP 66

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
                 I+       G+++IL+NNA +  +   +D++ ED       N + V+++++   
Sbjct: 67  ASVAAAIKRAKEKE-GRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVL 125

Query: 122 PLFKASGNGSIVFISSV-GGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
           P   A  +G IV +SSV G +   P  + Y   K A+  LTK+LA E+A+  IR N + P
Sbjct: 126 PEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICP 185

Query: 181 WVIKTSMIKPF--EEGPEGSE-FLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ 237
             ++T M +    +  PE  E  L  +A+  P+ R  +P EV  L AFL    +SY+TG 
Sbjct: 186 GYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELAAFLASDESSYLTGT 245

Query: 238 IICVDGGVTV--TVNV 251
              +DGG T+  TV+V
Sbjct: 246 QNVIDGGSTLPETVSV 261

Length = 263

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score =  126 bits (319), Expect = 2e-35
 Identities = 79/249 (31%), Positives = 122/249 (48%), Gaps = 6/249 (2%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            A++TG + GIG A  +  AR GA V   +R Q ELD  + E + +G +      D+   
Sbjct: 8   VAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDE 67

Query: 62  EQREKLIETVTSIFQGKLNILINNAAI-AFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
              + L+      F G L+I  NNA     + P  +++ E      +TN  S F  ++  
Sbjct: 68  AYAKALVALAVERF-GGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQ 126

Query: 121 HPLFKASGNGSIVFISS-VGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
            P   A G GS++F S+ VG   G P ++ Y A K  +  LT+ LA E+    IR N + 
Sbjct: 127 IPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALL 186

Query: 180 PWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
           P    T M +   + PE   F+ G+     + R  +P+E++    FL   AAS++TG  +
Sbjct: 187 PGGTDTPMGRAMGDTPEALAFVAGLH---ALKRMAQPEEIAQAALFLASDAASFVTGTAL 243

Query: 240 CVDGGVTVT 248
            VDGGV++T
Sbjct: 244 LVDGGVSIT 252

Length = 254

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score =  126 bits (319), Expect = 2e-35
 Identities = 69/260 (26%), Positives = 111/260 (42%), Gaps = 18/260 (6%)

Query: 3   ALVTGGTRGIGHATVEELARFGA-------------IVHTCSRNQIELDARLHEWKNKGF 49
           A +TG  RG G A    LA  GA                     + +LD      +  G 
Sbjct: 6   AFITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETARLVEALGR 65

Query: 50  KVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTN 109
           KV     D+    +   ++E     F G+L++++ NA +     + +++ E   TV   N
Sbjct: 66  KVLARKADVRDLAEVRAVVEDGVEQF-GRLDVVVANAGVLSYGRSWELSEEQWDTVLDIN 124

Query: 110 FESVFHLSQLAHP-LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEW 168
              V+   +   P + +    GSI+  SSV G++ +P ++ Y A K  +  LTK LA E 
Sbjct: 125 LTGVWRTCKAVVPHMIERGNGGSIIITSSVAGLKALPGLAHYAAAKHGLVGLTKTLANEL 184

Query: 169 AKDNIRTNTVAPWVIKTSMIKP---FEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAF 225
           A+  IR N++ P+ + T MI P    E   +  E         P+     P++V+  V +
Sbjct: 185 AEYGIRVNSIHPYSVDTPMIAPEAMREAFLKYPEAARAFMPALPVSGFVPPEDVADAVLW 244

Query: 226 LCLPAASYITGQIICVDGGV 245
           L    + YITG  + VD G 
Sbjct: 245 LASDESRYITGHQLPVDAGA 264

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score =  126 bits (319), Expect = 2e-35
 Identities = 81/261 (31%), Positives = 119/261 (45%), Gaps = 20/261 (7%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            A++TGGT  +G A    LA+ GA V    RNQ + D    E    G +      D+  R
Sbjct: 7   VAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEITALGGRAIALAADVLDR 66

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTV--------------DITAEDMSTVSS 107
              E+  E + + F G ++ILIN A       T               D+  E    V  
Sbjct: 67  ASLERAREEIVAQF-GTVDILINGAGGNHPDATTDPEHYEPETEQNFFDLDEEGWEFVFD 125

Query: 108 TNFESVFHLSQ-LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLAC 166
            N    F  SQ     + +  G GSI+ ISS+     +  V  Y A K A++  T+ LA 
Sbjct: 126 LNLNGSFLPSQVFGKDMLEQKG-GSIINISSMNAFSPLTKVPAYSAAKAAVSNFTQWLAV 184

Query: 167 EWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGS--EFLDGIARQTPIGRAGEPDEVSSLVA 224
           E+A   +R N +AP    T   +     P+GS  +  + I  +TP+GR G+P+E+   + 
Sbjct: 185 EFATTGVRVNAIAPGFFVTPQNRKLLINPDGSYTDRSNKILGRTPMGRFGKPEELLGALL 244

Query: 225 FLC-LPAASYITGQIICVDGG 244
           FL    A+S++TG +I VDGG
Sbjct: 245 FLASEKASSFVTGVVIPVDGG 265

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score =  126 bits (317), Expect = 4e-35
 Identities = 82/259 (31%), Positives = 116/259 (44%), Gaps = 20/259 (7%)

Query: 2   TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLS 59
            ALVTG T GIG      LA  GA IV     +  E++A       K G KV     DLS
Sbjct: 4   VALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKHGVKVLYHGADLS 63

Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
                E ++      F G ++IL+NNA I  V P  D   E    + + N  +VFH ++L
Sbjct: 64  KPAAIEDMVAYAQRQF-GGVDILVNNAGIQHVAPIEDFPTEKWDAIIALNLSAVFHTTRL 122

Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
           A P  K  G G I+ I+SV G+    + S Y A K  +  LTK +A E A   +  N + 
Sbjct: 123 ALPHMKKQGWGRIINIASVHGLVASANKSAYVAAKHGVVGLTKVVALETAGTGVTCNAIC 182

Query: 180 PWVIKTSMIK------------PFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLC 227
           P  + T +++            P E+        + +  + P  +   P+++     FL 
Sbjct: 183 PGWVLTPLVEKQISALAQKNGVPQEQAAR-----ELLLEKQPSKQFVTPEQLGDTAVFLA 237

Query: 228 LPAASYITGQIICVDGGVT 246
             AAS ITG  + VDGG T
Sbjct: 238 SDAASQITGTAVSVDGGWT 256

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score =  124 bits (314), Expect = 1e-34
 Identities = 74/251 (29%), Positives = 119/251 (47%), Gaps = 19/251 (7%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           A+VTGG++GIG A V  L   G+ V      +              FK      D+S++E
Sbjct: 9   AIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS------YNDVDYFK-----VDVSNKE 57

Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
           Q  K I+ V S + G+++IL+NNA I        +  ++   + + N   +F +S+   P
Sbjct: 58  QVIKGIDYVISKY-GRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIP 116

Query: 123 LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWV 182
                  G I+ I+SV       + + Y   K A+  LT+++A ++A   IR   V P  
Sbjct: 117 YMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRSIAVDYAP-TIRCVAVCPGS 175

Query: 183 IKTSMI---KPFEEGPEGSEFLDGI---ARQTPIGRAGEPDEVSSLVAFLCLPAASYITG 236
           I+T ++      E G +       I       P+ R G+P+EV+ +VAFL    AS+ITG
Sbjct: 176 IRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYVVAFLASDLASFITG 235

Query: 237 QIICVDGGVTV 247
           + + VDGG+  
Sbjct: 236 ECVTVDGGLRA 246

Length = 258

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  123 bits (312), Expect = 2e-34
 Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 8/206 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             L+TG + GIG A    LA  G  V   +RN  +L++ L E  N   +V     D++  
Sbjct: 2   VVLITGCSSGIGLALALALAAQGYRVIATARNPDKLES-LGELLNDNLEVL--ELDVTDE 58

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           E  +  ++ V   F G++++L+NNA      P  + + E++  +   N      +++   
Sbjct: 59  ESIKAAVKEVIERF-GRIDVLVNNAGYGLFGPLEETSIEEVRELFEVNVFGPLRVTRAFL 117

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           PL +  G+G IV +SSV G+   P +  Y A K A+  L+++L  E A   I+   + P 
Sbjct: 118 PLMRKQGSGRIVNVSSVAGLVPTPFLGPYCASKAALEALSESLRLELAPFGIKVTIIEPG 177

Query: 182 VIKT----SMIKPFEEGPEGSEFLDG 203
            ++T    +      E PE S +   
Sbjct: 178 PVRTGFADNAAGSALEDPEISPYAPE 203

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score =  123 bits (311), Expect = 3e-34
 Identities = 83/258 (32%), Positives = 109/258 (42%), Gaps = 29/258 (11%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           ALVTG +RGIG A  + LA+ GA V   SR      A        G K     C +   E
Sbjct: 11  ALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEME 70

Query: 63  QREKLIETVTSIFQGKLNILINNAA-------------IAFVKPTVDITAEDMSTVSSTN 109
           Q + L   +     G+L+IL+NNAA              AF K TVD+           N
Sbjct: 71  QIDALFAHIRERH-GRLDILVNNAAANPYFGHILDTDLGAFQK-TVDV-----------N 117

Query: 110 FESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA 169
               F +S  A  L K  G GSIV ++SV GV       +Y   K A+  +TK  A E A
Sbjct: 118 IRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITKAAVISMTKAFAKECA 177

Query: 170 KDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLP 229
              IR N + P +  T       +       L       P+ R  EP E++  V +L   
Sbjct: 178 PFGIRVNALLPGLTDTKFASALFKND---AILKQALAHIPLRRHAEPSEMAGAVLYLASD 234

Query: 230 AASYITGQIICVDGGVTV 247
           A+SY TG+ + VDGG   
Sbjct: 235 ASSYTTGECLNVDGGYLS 252

Length = 252

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score =  124 bits (312), Expect = 3e-34
 Identities = 76/248 (30%), Positives = 123/248 (49%), Gaps = 7/248 (2%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            A++TG + GIG A+   LA+ GA V         +   + + K+ G K      D+S  
Sbjct: 8   VAVITGASTGIGQASAIALAQEGAYV-LAVDIAEAVSETVDKIKSNGGKAKAYHVDISDE 66

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTV-DITAEDMSTVSSTNFESVFHLSQLA 120
           +Q +     +   F G++++L NNA +      + +   +    + + +    F ++++ 
Sbjct: 67  QQVKDFASEIKEQF-GRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKML 125

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
            PL    G GSI+  SS  G       S Y A KGA+   TK++A E+ +D IR N +AP
Sbjct: 126 LPLMMEQG-GSIINTSSFSGQAADLYRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAP 184

Query: 181 WVIKTSMIKPF---EEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ 237
             I+T ++       E   G  F +     TP+GR G+P+EV+ LV FL    +S+ITG+
Sbjct: 185 GTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDSSFITGE 244

Query: 238 IICVDGGV 245
            I +DGGV
Sbjct: 245 TIRIDGGV 252

Length = 272

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score =  123 bits (310), Expect = 4e-34
 Identities = 79/254 (31%), Positives = 114/254 (44%), Gaps = 18/254 (7%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           ALVTGG  GIG A  + LA  GA V     +  E+  ++ E    G +  G  CD++S  
Sbjct: 4   ALVTGGASGIGLAIAKRLAAEGAAVVVADID-PEIAEKVAEAAQGGPRALGVQCDVTSEA 62

Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
           Q +   E     F G L+I+++NA IA   P  + + ED +     N    F +S+ A  
Sbjct: 63  QVQSAFEQAVLEF-GGLDIVVSNAGIATSSPIAETSLEDWNRSMDINLTGHFLVSREAFR 121

Query: 123 LFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP- 180
           + K+ G  G+IVF +S   V   P+ + Y A K A   L + LA E  +D IR NTV P 
Sbjct: 122 IMKSQGIGGNIVFNASKNAVAPGPNAAAYSAAKAAEAHLARCLALEGGEDGIRVNTVNPD 181

Query: 181 WVIKTSMIKPFEEGPEGSEFLDGIAR---------QTPIGRAGEPDEVSSLVAFLCLPAA 231
            V + S I  +E            A          +  + R   P++V+  V  +     
Sbjct: 182 AVFRGSKI--WE---GVWRAARAKAYGLLEEEYRTRNLLKREVLPEDVAEAVVAMASEDF 236

Query: 232 SYITGQIICVDGGV 245
              TG I+ VDGG 
Sbjct: 237 GKTTGAIVTVDGGN 250

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score =  123 bits (310), Expect = 4e-34
 Identities = 74/253 (29%), Positives = 118/253 (46%), Gaps = 14/253 (5%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
            LVTG  +GIG+A    LA  GA V    RN  +L   + + +  G+       D++   
Sbjct: 1   VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRYGYPFATYKLDVADSA 60

Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
             +++++ +     G +++L+N A I  +     ++ ED     + N   VF++SQ   P
Sbjct: 61  AVDEVVQRLERE-YGPIDVLVNVAGILRLGAIDSLSDEDWQATFAVNTFGVFNVSQAVSP 119

Query: 123 LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWV 182
             K   +G+IV + S         ++ Y A K A+  LTK L  E A   IR N V+P  
Sbjct: 120 RMKRRRSGAIVTVGSNAANVPRMGMAAYAASKAALTMLTKCLGLELAPYGIRCNVVSPGS 179

Query: 183 IKTSMIKPF-------EEGPEGS--EFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASY 233
             T M +         ++   GS  +F  GI    P+G+  EP ++++ V FL    AS+
Sbjct: 180 TDTEMQRQLWNDEYGEQQVIAGSPEQFRLGI----PLGKIAEPSDIANAVLFLASDLASH 235

Query: 234 ITGQIICVDGGVT 246
           IT   + VDGG T
Sbjct: 236 ITMHDLVVDGGAT 248

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  122 bits (308), Expect = 5e-34
 Identities = 80/249 (32%), Positives = 114/249 (45%), Gaps = 24/249 (9%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           T L+TG   GIG A        GA V+   +      +      N  F       DLS  
Sbjct: 7   TVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDLS-----GNFHFLQL----DLS-- 55

Query: 62  EQREKLIETVTSIFQGKLNILINNAAI--AFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
           +  E L + V S+     +IL N A I   + KP +D + E+   +  TN  S F L++ 
Sbjct: 56  DDLEPLFDWVPSV-----DILCNTAGILDDY-KPLLDTSLEEWQHIFDTNLTSTFLLTRA 109

Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
             P      +G I+ + S+         + Y A K A+   TK LA ++AKD I+   +A
Sbjct: 110 YLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHALAGFTKQLALDYAKDGIQVFGIA 169

Query: 180 PWVIKTSM-IKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI 238
           P  +KT M    FE G       D +AR+TPI R  EP+EV+ L  FL    A Y+ G I
Sbjct: 170 PGAVKTPMTAADFEPG----GLADWVARETPIKRWAEPEEVAELTLFLASGKADYMQGTI 225

Query: 239 ICVDGGVTV 247
           + +DGG T+
Sbjct: 226 VPIDGGWTL 234

Length = 235

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score =  122 bits (307), Expect = 7e-34
 Identities = 73/247 (29%), Positives = 109/247 (44%), Gaps = 18/247 (7%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
             +TGG  G+G AT   LA  GA V    R    L   L        ++ G   DL   +
Sbjct: 10  VAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGG--IDLVDPQ 67

Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTV-DITAEDMSTVSSTNFESVFHLSQLAH 121
              + ++ V   F G+L+ L+N A  AFV  T+ D  A+    +   N ++  + S+ A 
Sbjct: 68  AARRAVDEVNRQF-GRLDALVNIAG-AFVWGTIADGDADTWDRMYGVNVKTTLNASKAAL 125

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P   ASG G IV I +   ++  P +  Y A K  + +LT+ LA E     I  N V P 
Sbjct: 126 PALTASGGGRIVNIGAGAALKAGPGMGAYAAAKAGVARLTEALAAELLDRGITVNAVLPS 185

Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
           +I T   +         +  D         R   P+++++++AFL    A  ITG  I V
Sbjct: 186 IIDTPPNRA--------DMPDAD-----FSRWVTPEQIAAVIAFLLSDEAQAITGASIPV 232

Query: 242 DGGVTVT 248
           DGGV + 
Sbjct: 233 DGGVALP 239

Length = 239

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  122 bits (309), Expect = 7e-34
 Identities = 76/258 (29%), Positives = 117/258 (45%), Gaps = 18/258 (6%)

Query: 1   MTALVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLS 59
             ALVTGG RGIG      LA  G  +      +  EL A   E +  G +V     D++
Sbjct: 3   PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVA 62

Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVK--PTVDITAEDMSTVSSTNFESVFHLS 117
                E +++   + + G+++ L+NNA +        +D+T E    V + N    F L+
Sbjct: 63  DLSAHEAMLDAAQAAW-GRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLT 121

Query: 118 Q------LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKD 171
           Q      LA P  +   + SIVF+SSV  +   P+   Y   K  ++   +  A   A++
Sbjct: 122 QAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYCISKAGLSMAAQLFAARLAEE 181

Query: 172 NIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQ--TPIGRAGEPDEVSSLVAFLCLP 229
            I    V P +IKT M  P       +   D +  +   P+ R GEP++V+  VA L   
Sbjct: 182 GIGVYEVRPGLIKTDMTAPV------TAKYDALIAKGLVPMPRWGEPEDVARAVAALASG 235

Query: 230 AASYITGQIICVDGGVTV 247
              Y TGQ I VDGG+++
Sbjct: 236 DLPYSTGQAIHVDGGLSI 253

Length = 256

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score =  122 bits (307), Expect = 1e-33
 Identities = 69/256 (26%), Positives = 112/256 (43%), Gaps = 16/256 (6%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE-LDARLHEWKNKGFKVTGSVCDLSS 60
            A+VTG +RGIG A   ELA  G  +        +     + E    G +      D+  
Sbjct: 3   VAIVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAAGRRAIYFQADIGE 62

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPT--VDITAEDMSTVSSTNFESVFHLSQ 118
               E L++     F G+L+ L+NNA IA       +D+T +    + + N    F L+Q
Sbjct: 63  LSDHEALLDQAWEDF-GRLDCLVNNAGIAVRPRGDLLDLTEDSFDRLIAINLRGPFFLTQ 121

Query: 119 ------LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDN 172
                 +  P      + SI+F++S+      P+   Y   K  ++  T+ LA   A + 
Sbjct: 122 AVARRMVEQPDRFDGPHRSIIFVTSINAYLVSPNRGEYCISKAGLSMATRLLAYRLADEG 181

Query: 173 IRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIAR-QTPIGRAGEPDEVSSLVAFLCLPAA 231
           I  + + P +I T M  P +E  +       IA    PI R G+P++++  V  L     
Sbjct: 182 IAVHEIRPGLIHTDMTAPVKEKYDEL-----IAAGLVPIRRWGQPEDIAKAVRTLASGLL 236

Query: 232 SYITGQIICVDGGVTV 247
            Y TGQ I +DGG+++
Sbjct: 237 PYSTGQPINIDGGLSM 252

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score =  119 bits (301), Expect = 1e-33
 Identities = 49/171 (28%), Positives = 79/171 (46%), Gaps = 8/171 (4%)

Query: 2   TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDAR--LHEWKNKGFKVTGSVCDL 58
           T L+TGGT G+G A    LA  GA  +   SR      A   + E +  G +VT + CD+
Sbjct: 2   TVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGAEVTVAACDV 61

Query: 59  SSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQ 118
           + R+    L+  + +   G L+ +++NA +    P  ++T E    V +      ++L +
Sbjct: 62  ADRDALAALLAALPAAL-GPLDGVVHNAGVLDDGPLEELTPERFERVLAPKVTGAWNLHE 120

Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA 169
           L   L      G+ V  SSV GV G P  + Y A   A++ L ++   E  
Sbjct: 121 LTRDL----DLGAFVLFSSVAGVLGSPGQANYAAANAALDALAEHRRAEGL 167

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score =  121 bits (306), Expect = 1e-33
 Identities = 78/247 (31%), Positives = 111/247 (44%), Gaps = 24/247 (9%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           T LVTG T+GIG A    LA  G  V   +R+ I+            F      CDL+  
Sbjct: 5   TVLVTGATKGIGLALSLRLANLGHQVIGIARSAID-----------DFPGELFACDLADI 53

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           EQ    +  +  I    ++ ++NN  IA  +P   I    +  V   N  +   ++Q   
Sbjct: 54  EQTAATLAQINEIH--PVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFL 111

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
              K    G IV I S   + G    + Y A K A+   T+  A E A+  I  N VAP 
Sbjct: 112 EGMKLREQGRIVNICSRA-IFGALDRTSYSAAKSALVGCTRTWALELAEYGITVNAVAPG 170

Query: 182 VIKTSMIKPFEEGPEGSE----FLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ 237
            I+T + +  +  P GSE     L  I    P+ R G P+EV++ +AFL    A +ITGQ
Sbjct: 171 PIETELFR--QTRPVGSEEEKRVLASI----PMRRLGTPEEVAAAIAFLLSDDAGFITGQ 224

Query: 238 IICVDGG 244
           ++ VDGG
Sbjct: 225 VLGVDGG 231

Length = 234

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score =  122 bits (307), Expect = 1e-33
 Identities = 75/249 (30%), Positives = 109/249 (43%), Gaps = 11/249 (4%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            A+VTG   GIG A  E LAR GA V     N    +    +    G        D+S  
Sbjct: 8   VAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDP 67

Query: 62  EQREKLIETVTSIFQGKLNILINNAAI-AFVKPTVDITA--EDMSTVSSTNFESVFHLSQ 118
           +  + + +   S F G ++ L+NNAAI   +K  + IT   +      S N +     ++
Sbjct: 68  DSAKAMADATVSAF-GGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTR 126

Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
             +      G G+IV  SS          + YG  K  +N LT+ LA E    NIR N +
Sbjct: 127 AVYKHMAKRGGGAIVNQSSTAA---WLYSNFYGLAKVGLNGLTQQLARELGGMNIRVNAI 183

Query: 179 APWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI 238
           AP  I T   +         EF+  + +  P+ R G P+++  +  FL    AS+ITGQI
Sbjct: 184 APGPIDTEATRTVTPK----EFVADMVKGIPLSRMGTPEDLVGMCLFLLSDEASWITGQI 239

Query: 239 ICVDGGVTV 247
             VDGG  +
Sbjct: 240 FNVDGGQII 248

Length = 250

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score =  121 bits (306), Expect = 1e-33
 Identities = 78/248 (31%), Positives = 122/248 (49%), Gaps = 6/248 (2%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE-LDARLHEWK-NKGFKVT-GSVCDLS 59
           A +TG   G+G A    +A  GA V     N    LDA   E     G  V   +V D++
Sbjct: 2   AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVT 61

Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
              Q + L+        G L++L+NNA +        I  ++   V + N ES+F   + 
Sbjct: 62  DEAQWQALLAQAADAMGG-LSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKH 120

Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKD--NIRTNT 177
           A P  +AS   SIV ISSV   +  P  + Y A K A+  LTK++A + A+   ++R N+
Sbjct: 121 ALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVASLTKSIALDCARRGLDVRCNS 180

Query: 178 VAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ 237
           + P  I+T ++ P  +     E    +AR  P+GR GEPD+V+  V +L    + ++TG 
Sbjct: 181 IHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVAHAVLYLASDESRFVTGA 240

Query: 238 IICVDGGV 245
            + +DGG+
Sbjct: 241 ELVIDGGI 248

Length = 251

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  121 bits (304), Expect = 3e-33
 Identities = 84/248 (33%), Positives = 125/248 (50%), Gaps = 13/248 (5%)

Query: 1   MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG---FKVTGSVCD 57
             AL+TGGTRGIG A  E   R GA V     N  E +A+  E + KG    K     CD
Sbjct: 8   KVALITGGTRGIGRAIAEAFLREGAKV-AVLYNSAENEAK--ELREKGVFTIK-----CD 59

Query: 58  LSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLS 117
           + +R+Q +K  E V   F G++++L+NNA I ++ P  +   E  + +   N     + +
Sbjct: 60  VGNRDQVKKSKEVVEKEF-GRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTT 118

Query: 118 QLAHPLFKASGNGSIVFISSVGGV-RGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTN 176
               PL K S NG+IV I+S  G+       + Y   K  +  LT+ LA E  K  IR N
Sbjct: 119 YEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAITKAGIIILTRRLAFELGKYGIRVN 178

Query: 177 TVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG 236
            VAP  ++T M    +   E  +  +    +T +   G+P++++++V FL    A YITG
Sbjct: 179 AVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKTTGKPEDIANIVLFLASDDARYITG 238

Query: 237 QIICVDGG 244
           Q+I  DGG
Sbjct: 239 QVIVADGG 246

Length = 255

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score =  120 bits (303), Expect = 4e-33
 Identities = 73/249 (29%), Positives = 123/249 (49%), Gaps = 8/249 (3%)

Query: 3   ALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
            L+TG  +GIG      LA +GA  I++  +  + EL     + + +G K   +  +++ 
Sbjct: 12  ILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVA--KLRQEGIKAHAAPFNVTH 69

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
           +++ E  IE +     G +++LINNA I    P  +   ++ + V + N  +VF +SQ  
Sbjct: 70  KQEVEAAIEHIEKDI-GPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAV 128

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
                    G I+ I S+    G  +++ Y A KGA+  LT+ +  E A+ NI+ N +AP
Sbjct: 129 ARYMVKRQAGKIINICSMQSELGRDTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAP 188

Query: 181 WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
              KT M K   E      F   + ++TP  R G+P E+     FL   A+ ++ G ++ 
Sbjct: 189 GYFKTEMTKALVEDE---AFTAWLCKRTPAARWGDPQELIGAAVFLSSKASDFVNGHLLF 245

Query: 241 VDGGVTVTV 249
           VDGG+ V V
Sbjct: 246 VDGGMLVAV 254

Length = 254

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  120 bits (302), Expect = 6e-33
 Identities = 83/248 (33%), Positives = 127/248 (51%), Gaps = 16/248 (6%)

Query: 2   TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
             +VTG  RGIG A    LA+ G+ +V    +   E++  L   K  G +  G + D+S+
Sbjct: 8   VVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVST 67

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
           RE  E L +     + G  +IL+NNA +    P +++  + +    ST+F+SV + SQ  
Sbjct: 68  REGCETLAKATIDRY-GVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQEL 126

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
               +  G  +IV I+SV G+R    +S+YGA K A+  LTK LA E A   IR N +AP
Sbjct: 127 AKEMREGG--AIVNIASVAGIRPAYGLSIYGAMKAAVINLTKYLALELAP-KIRVNAIAP 183

Query: 181 WVIKT----SMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG 236
             +KT    S+ K    G    EF +   + T +G+  +P+EV+  VA +       ITG
Sbjct: 184 GFVKTKLGESLFKVL--GMSEKEFAE---KFTLMGKILDPEEVAEFVAAIL--KIESITG 236

Query: 237 QIICVDGG 244
           Q+  +D G
Sbjct: 237 QVFVLDSG 244

Length = 252

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score =  119 bits (300), Expect = 2e-32
 Identities = 73/250 (29%), Positives = 116/250 (46%), Gaps = 18/250 (7%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             +V GGT GI     +  AR GA V   SR+Q ++DA + + +  G +  G   D+   
Sbjct: 11  NVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDY 70

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
              E     +   F G +++L++ AA  F  P   ++A    TV   +    F++ + A+
Sbjct: 71  AAVEAAFAQIADEF-GPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAY 129

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           PL +  G  SI+ IS+      +P  +   A K  ++ LT+ LA EW  + IR N++ P 
Sbjct: 130 PLLRRPG-ASIIQISAPQAFVPMPMQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPG 188

Query: 182 VIKTSMIKPFEEGPEG-------SEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYI 234
            I          G EG        E    +A+  P+ R G   ++++   FL    ASYI
Sbjct: 189 PI---------AGTEGMARLAPSPELQAAVAQSVPLKRNGTKQDIANAALFLASDMASYI 239

Query: 235 TGQIICVDGG 244
           TG ++ VDGG
Sbjct: 240 TGVVLPVDGG 249

Length = 264

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score =  118 bits (298), Expect = 2e-32
 Identities = 72/245 (29%), Positives = 105/245 (42%), Gaps = 14/245 (5%)

Query: 2   TALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLS 59
            ALVTG  + IG A  E LA  G   +VH  +R++ E      E             DLS
Sbjct: 2   VALVTGAAKRIGRAIAEALAAEGYRVVVH-YNRSEAEAQRLKDELNALRNSAVLVQADLS 60

Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
                  L+      F G+ ++L+NNA+  +  P    + +  + +   N ++ + L Q 
Sbjct: 61  DFAACADLVAAAFRAF-GRCDVLVNNASAFYPTPLGQGSEDAWAELFGINLKAPYLLIQA 119

Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
                  S NGSI+ I      R +     Y   K A+  LT++ A E A  NIR N +A
Sbjct: 120 FARRLAGSRNGSIINIIDAMTDRPLTGYFAYCMSKAALEGLTRSAALELAP-NIRVNGIA 178

Query: 180 PWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
           P +I        E         +   R+ P+ R    +E++  V FL     +YITGQII
Sbjct: 179 PGLILLPEDMDAEY-------RENALRKVPLKRRPSAEEIADAVIFLLDS--NYITGQII 229

Query: 240 CVDGG 244
            VDGG
Sbjct: 230 KVDGG 234

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  118 bits (298), Expect = 2e-32
 Identities = 69/251 (27%), Positives = 114/251 (45%), Gaps = 9/251 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           TA+VTG   GIG     ELAR GA V     NQ   +A   E    G K  G   D+++ 
Sbjct: 9   TAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNE 68

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           +     I+ V   F G ++IL++NA I  V P  + +  D   + + + +  F  ++ A 
Sbjct: 69  DAVNAGIDKVAERF-GSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAAL 127

Query: 122 P-LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
             ++K    G ++++ SV      P  S Y   K  +  L + LA E AK N+R++ V P
Sbjct: 128 KHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCP 187

Query: 181 WVIKTSMIK---PFEEGPEGSEFLDGIAR----QTPIGRAGEPDEVSSLVAFLCLPAASY 233
             ++T ++    P +    G    + + +    +T  G     ++V+  V FL    ++ 
Sbjct: 188 GFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQTVLFLSSFPSAA 247

Query: 234 ITGQIICVDGG 244
           +TGQ   V  G
Sbjct: 248 LTGQSFVVSHG 258

Length = 262

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score =  118 bits (298), Expect = 3e-32
 Identities = 81/253 (32%), Positives = 113/253 (44%), Gaps = 22/253 (8%)

Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQ--IELDARLHEWKNKGFKVTGSVCDLSSR 61
           +VTGG  GIG A    LA  GAI     R+    E    L   + +   V     DL+  
Sbjct: 11  IVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQ---VDLTDD 67

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
            Q    +E   + F G+++ L+NNA    V   V + A   + V+S    ++ H   +AH
Sbjct: 68  AQCRDAVEQTVAKF-GRIDGLVNNAG---VNDGVGLEAGREAFVASLE-RNLIHYYVMAH 122

Query: 122 ---PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
              P  KAS  G+IV ISS   + G    S Y A KGA   LT+  A   AKD +R N V
Sbjct: 123 YCLPHLKAS-RGAIVNISSKTALTGQGGTSGYAAAKGAQLALTREWAVALAKDGVRVNAV 181

Query: 179 APWVIKTSM----IKPFEEGPEGSEFLDGIARQTPIG-RAGEPDEVSSLVAFLCLPAASY 233
            P  + T +    I  F    +    L  I  + P+G R    +E++    FL    +S+
Sbjct: 182 IPAEVMTPLYENWIATF---DDPEAKLAAITAKIPLGHRMTTAEEIADTAVFLLSERSSH 238

Query: 234 ITGQIICVDGGVT 246
            TGQ + VDGG  
Sbjct: 239 TTGQWLFVDGGYV 251

Length = 258

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score =  117 bits (293), Expect = 9e-32
 Identities = 82/247 (33%), Positives = 127/247 (51%), Gaps = 10/247 (4%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           AL+TG + GIG          GA V   +R+   L+    E    G KV    CD+S  +
Sbjct: 12  ALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQ 71

Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA-H 121
           Q   +++ VT+   G ++I + NA I  V P +D+  E+   + +TN   VF  +Q A  
Sbjct: 72  QVTSMLDQVTAEL-GGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAK 130

Query: 122 PLFKASGNGSIVFISSVGG-VRGIPS-VSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
            + K    G I+  +S+ G +  +P  VS Y A K A+  LTK +A E A   IR N+V+
Sbjct: 131 AMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVS 190

Query: 180 PWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
           P  I T +++P+      +E+      + P+GR G P+E++ L  +L   A+SY+TG  I
Sbjct: 191 PGYILTELVEPY------TEYQPLWEPKIPLGRLGRPEELAGLYLYLASEASSYMTGSDI 244

Query: 240 CVDGGVT 246
            +DGG T
Sbjct: 245 VIDGGYT 251

Length = 253

>gnl|CDD|187619 cd05361, haloalcohol_DH_SDR_c-like, haloalcohol dehalogenase, classical (c) SDRs

 Score =  116 bits (292), Expect = 1e-31
 Identities = 74/247 (29%), Positives = 107/247 (43%), Gaps = 14/247 (5%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIV--HTCSRNQIELDARLHEWKNKGFKVTGSVCDLS 59
            ALVT      G A+ E L   G  V  H  S             +N G K       LS
Sbjct: 3   IALVTHARHFAGPASAEALTEDGYTVVCHDASFADAAERQAFES-ENPGTKA------LS 55

Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAED--MSTVSSTNFESVFHLS 117
            ++  E L++ V     G +++L++N  I      +D T+E        + +    F L 
Sbjct: 56  EQKPEE-LVDAVLQAG-GAIDVLVSNDYIPRPMNPIDGTSEADIRQAFEALSIFP-FALL 112

Query: 118 QLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
           Q A    K +G GSI+FI+S    + +   SLYG  + A   L ++LA E ++DNI    
Sbjct: 113 QAAIAQMKKAGGGSIIFITSAVPKKPLAYNSLYGPARAAAVALAESLAKELSRDNILVYA 172

Query: 178 VAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ 237
           + P    +    P  +     E  + + R  P+GR G PDE+ +LVAFL    A  ITGQ
Sbjct: 173 IGPNFFNSPTYFPTSDWENNPELRERVKRDVPLGRLGRPDEMGALVAFLASRRADPITGQ 232

Query: 238 IICVDGG 244
                GG
Sbjct: 233 FFAFAGG 239

Dehalogenases cleave carbon-halogen bonds. Haloalcohol dehalogenase show low sequence similarity to short-chain dehydrogenases/reductases (SDRs). Like the SDRs, haloalcohol dehalogenases have a conserved catalytic triad (Ser-Tyr-Lys/Arg), and form a Rossmann fold. However, the normal classical SDR NAD(P)-binding motif (TGXXGXG) and NAD-binding function is replaced with a halide binding site, allowing the enzyme to catalyze a dehalogenation reaction. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score =  116 bits (292), Expect = 1e-31
 Identities = 69/251 (27%), Positives = 111/251 (44%), Gaps = 17/251 (6%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
            +VTG  +GIG A    L + GA V       + L       +     V  +    + RE
Sbjct: 1   VIVTGAAQGIGRAVARHLLQAGATVIALDLPFVLLLEYGDPLRLTPLDVADAA---AVRE 57

Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
              +L+        G ++ L+N A +     T  ++ ED     + N   VF+L Q   P
Sbjct: 58  VCSRLLAEH-----GPIDALVNCAGVLRPGATDPLSTEDWEQTFAVNVTGVFNLLQAVAP 112

Query: 123 LFKASGNGSIVFISSVGGVRGIPSVSL--YGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
             K    G+IV ++S      +P +S+  YGA K A+  L+K L  E A   +R N V+P
Sbjct: 113 HMKDRRTGAIVTVAS--NAAHVPRISMAAYGASKAALASLSKCLGLELAPYGVRCNVVSP 170

Query: 181 WVIKTSMIKPFEEGPEGSE-FLDGIARQ----TPIGRAGEPDEVSSLVAFLCLPAASYIT 235
               T+M +      +G+   + G+  Q     P+G+  +P ++++ V FL    A +IT
Sbjct: 171 GSTDTAMQRTLWHDEDGAAQVIAGVPEQFRLGIPLGKIAQPADIANAVLFLASDQAGHIT 230

Query: 236 GQIICVDGGVT 246
              + VDGG T
Sbjct: 231 MHDLVVDGGAT 241

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score =  116 bits (294), Expect = 2e-31
 Identities = 82/262 (31%), Positives = 121/262 (46%), Gaps = 21/262 (8%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            A++TGG   +G A  +ELAR GA V    RNQ + +A + E K  G +      D+  +
Sbjct: 12  VAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDK 71

Query: 62  EQREKLIETVTSIFQGKLNILIN----NAAIAFVKPTVDITAEDMSTV---SSTNFESVF 114
           E  E+  + +   F G  +ILIN    N   A          E   T        FE VF
Sbjct: 72  ESLEQARQQILEDF-GPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVF 130

Query: 115 HLSQL---------AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLA 165
            L+ L         A  +    G G+I+ ISS+     +  V  Y A K A++  T+ LA
Sbjct: 131 DLNLLGTLLPTQVFAKDMVGRKG-GNIINISSMNAFTPLTKVPAYSAAKAAISNFTQWLA 189

Query: 166 CEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGS--EFLDGIARQTPIGRAGEPDEVSSLV 223
             +AK  IR N +AP    T   +      +GS  E  + I   TP+GR G+P+E+   +
Sbjct: 190 VHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTPMGRFGKPEELLGTL 249

Query: 224 AFLCLP-AASYITGQIICVDGG 244
            +L    A+S++TG ++ VDGG
Sbjct: 250 LWLADEKASSFVTGVVLPVDGG 271

Length = 278

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score =  116 bits (293), Expect = 2e-31
 Identities = 74/253 (29%), Positives = 120/253 (47%), Gaps = 10/253 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE--WKNKGFKVTGSVCDLS 59
            A+VTGG+ GIG ATVE L   GA V  C R++  L +       K  G ++  + CD+ 
Sbjct: 10  VAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVL 69

Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
                      V + F G +++L+NNA    V    D T +         + SV + ++ 
Sbjct: 70  DEADVAAFAAAVEARF-GGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRA 128

Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
             PL +AS   SIV ++S+  ++  P +    A +  +  L K+LA E A   +R N++ 
Sbjct: 129 FLPLLRASAAASIVCVNSLLALQPEPHMVATSAARAGLLNLVKSLATELAPKGVRVNSIL 188

Query: 180 PWVIKTSMIK-PFEEGPEGS----EFLDGIARQ--TPIGRAGEPDEVSSLVAFLCLPAAS 232
             ++++   +  +E   +       +   +AR+   P+GR G PDE +  + FL  P +S
Sbjct: 189 LGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGRPDEAARALFFLASPLSS 248

Query: 233 YITGQIICVDGGV 245
           Y TG  I V GG 
Sbjct: 249 YTTGSHIDVSGGF 261

Length = 265

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score =  115 bits (290), Expect = 3e-31
 Identities = 84/244 (34%), Positives = 123/244 (50%), Gaps = 8/244 (3%)

Query: 3   ALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           A+VTGG +GIG A    LA+ GA +V   + ++   +  ++E   +G  V     D+S  
Sbjct: 9   AIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKV 68

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           E   +L+E   + F GK++IL+NNA I   +    +  ED   V   N  SVF+ +    
Sbjct: 69  EDANRLVEEAVNHF-GKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVL 127

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P    +  G I+ ISS+ G  G    + Y A K  M   TK+LA E AK N+  N + P 
Sbjct: 128 PYITEAEEGRIISISSIIGQAGGFGQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPG 187

Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
            I T M+    E PE  E    I  + P  R G+ DE++  V +LC   A YITGQ + +
Sbjct: 188 FIDTEMVA---EVPE--EVRQKIVAKIPKKRFGQADEIAKGVVYLCRDGA-YITGQQLNI 241

Query: 242 DGGV 245
           +GG+
Sbjct: 242 NGGL 245

Length = 247

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score =  115 bits (289), Expect = 3e-31
 Identities = 65/198 (32%), Positives = 88/198 (44%), Gaps = 15/198 (7%)

Query: 2   TALVTGGTRGIGHATVEELARFGAI-VHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
            ALVTG  RGIG   V +LA+ G   V   +R+     A + + + +G  V     D++ 
Sbjct: 2   VALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAEGLSVRFHQLDVTD 61

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAF-----VKPTVDITAEDMSTVSSTNFESVFH 115
               E   + V   + G L+IL+NNA IAF       PT +   E M     TNF     
Sbjct: 62  DASIEAAADFVEEKY-GGLDILVNNAGIAFKGFDDSTPTREQARETM----KTNFFGTVD 116

Query: 116 LSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
           ++Q   PL K S  G IV +SS  G         YG  K A+N LT+ LA E  +  I+ 
Sbjct: 117 VTQALLPLLKKSPAGRIVNVSSGLGSLTSA----YGVSKAALNALTRILAKELKETGIKV 172

Query: 176 NTVAPWVIKTSMIKPFEE 193
           N   P  +KT M      
Sbjct: 173 NACCPGWVKTDMGGGKAP 190

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score =  115 bits (291), Expect = 3e-31
 Identities = 71/251 (28%), Positives = 111/251 (44%), Gaps = 13/251 (5%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            AL+TG   GIG A  E     GA         I+           G        D++ +
Sbjct: 8   VALLTGAASGIGEAVAERYLAEGA---RVVIADIKPARARLAALEIGPAAIAVSLDVTRQ 64

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQ-LA 120
           +  ++++      F G ++IL NNAA+  + P +DI+ +    + + N + +F L Q +A
Sbjct: 65  DSIDRIVAAAVERF-GGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVA 123

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
             + +    G I+ ++S  G RG   VS Y A K A+   T++ A    +  I  N +AP
Sbjct: 124 RHMVEQGRGGKIINMASQAGRRGEALVSHYCATKAAVISYTQSAALALIRHGINVNAIAP 183

Query: 181 WVIKTSM-------IKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASY 233
            V+ T M          +E  P G E    +    P+GR G PD+++ +  FL    A Y
Sbjct: 184 GVVDTPMWDQVDALFARYENRPPG-EKKRLVGEAVPLGRMGVPDDLTGMALFLASADADY 242

Query: 234 ITGQIICVDGG 244
           I  Q   VDGG
Sbjct: 243 IVAQTYNVDGG 253

Length = 257

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score =  115 bits (289), Expect = 3e-31
 Identities = 71/248 (28%), Positives = 125/248 (50%), Gaps = 12/248 (4%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            AL+T   +GIG A     AR GA V     N    + +L E   +G  +T  V D++ +
Sbjct: 4   VALITAAAQGIGRAIALAFAREGANVIATDIN----EEKLKEL-ERGPGITTRVLDVTDK 58

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           EQ   L +       G++++L N A        +D   +D     + N  S++ + +   
Sbjct: 59  EQVAALAKEE-----GRIDVLFNCAGFVHHGSILDCEDDDWDFAMNLNVRSMYLMIKAVL 113

Query: 122 PLFKASGNGSIVFISSVGG-VRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
           P   A  +GSI+ +SSV   ++G+P+  +Y   K A+  LTK++A ++A+  IR N + P
Sbjct: 114 PKMLARKDGSIINMSSVASSIKGVPNRFVYSTTKAAVIGLTKSVAADFAQQGIRCNAICP 173

Query: 181 WVIKTSMIKP-FEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
             + T  ++   +  P+  E L   A + P+GR   P+EV++L  +L    ++Y+TG  +
Sbjct: 174 GTVDTPSLEERIQAQPDPEEALKAFAARQPLGRLATPEEVAALAVYLASDESAYVTGTAV 233

Query: 240 CVDGGVTV 247
            +DGG ++
Sbjct: 234 VIDGGWSL 241

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score =  115 bits (290), Expect = 3e-31
 Identities = 74/251 (29%), Positives = 120/251 (47%), Gaps = 14/251 (5%)

Query: 2   TALVTGGTRGIGHATVEELARFG----AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCD 57
             ++TGG+ G+G A      RFG     +V     ++ E +    E K  G +      D
Sbjct: 9   VVVITGGSTGLGRAMAV---RFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGD 65

Query: 58  LSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLS 117
           ++       LI+T    F G L+++INNA I    P+ +++ ED + V +TN    F  S
Sbjct: 66  VTVESDVVNLIQTAVKEF-GTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGS 124

Query: 118 QLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTN 176
           + A   F      G+I+ +SSV      P    Y A KG +  +T+ LA E+A   IR N
Sbjct: 125 REAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAASKGGVKLMTETLAMEYAPKGIRVN 184

Query: 177 TVAPWVIKTSM-IKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT 235
            + P  I T +  + F +     +    +    P+G  G+P+E++++ A+L    ASY+T
Sbjct: 185 NIGPGAINTPINAEKFAD----PKQRADVESMIPMGYIGKPEEIAAVAAWLASSEASYVT 240

Query: 236 GQIICVDGGVT 246
           G  +  DGG+T
Sbjct: 241 GITLFADGGMT 251

Length = 261

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score =  114 bits (288), Expect = 7e-31
 Identities = 72/259 (27%), Positives = 113/259 (43%), Gaps = 27/259 (10%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           T  VTG  +GIG+A        GA V       I  D        + +     V D+S  
Sbjct: 10  TVWVTGAAQGIGYAVALAFVEAGAKV-------IGFD--QAFLTQEDYPFATFVLDVSDA 60

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
               ++ + + +   G L++L+N A I  +  T  ++ ED     + N    F+L +   
Sbjct: 61  AAVAQVCQRLLAE-TGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVM 119

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSL--YGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
           P F+   +G+IV + S      +P + +  YGA K A+  L K +  E A   +R N V+
Sbjct: 120 PQFRRQRSGAIVTVGSNAA--HVPRIGMAAYGASKAALTSLAKCVGLELAPYGVRCNVVS 177

Query: 180 PWVIKTSMIKPFEEGPEGSE-----FLD----GIARQTPIGRAGEPDEVSSLVAFLCLPA 230
           P    T M +      +G +     F +    GI    P+G+   P E+++ V FL    
Sbjct: 178 PGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGI----PLGKIARPQEIANAVLFLASDL 233

Query: 231 ASYITGQIICVDGGVTVTV 249
           AS+IT Q I VDGG T+  
Sbjct: 234 ASHITLQDIVVDGGATLGA 252

Length = 252

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score =  114 bits (287), Expect = 7e-31
 Identities = 73/249 (29%), Positives = 118/249 (47%), Gaps = 11/249 (4%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSV-CDLSSR 61
           A++TGG  GIG AT    A+ GA V       I+ DA        G      V CD++  
Sbjct: 7   AIITGGASGIGEATARLFAKHGARVVIAD---IDDDAGQAVAAELGDPDISFVHCDVTVE 63

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPT--VDITAEDMSTVSSTNFESVFHLSQL 119
                 ++T  + F G+L+I+ NNA +        ++ + E+   V   N    F  ++ 
Sbjct: 64  ADVRAAVDTAVARF-GRLDIMFNNAGVLGAPCYSILETSLEEFERVLDVNVYGAFLGTKH 122

Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
           A  +   +  GSIV ++SV GV G      Y A K A+  LT++ A E  +  IR N V+
Sbjct: 123 AARVMIPAKKGSIVSVASVAGVVGGLGPHAYTASKHAVLGLTRSAATELGEHGIRVNCVS 182

Query: 180 PWVIKTSMIKPFEEGPEGSEFLDGIARQ--TPIGRAGEPDEVSSLVAFLCLPAASYITGQ 237
           P+ + T ++     G E  E ++   R      G A  P+++++ V +L    + Y++GQ
Sbjct: 183 PYGVATPLLTA-GFGVE-DEAIEEAVRGAANLKGTALRPEDIAAAVLYLASDDSRYVSGQ 240

Query: 238 IICVDGGVT 246
            + VDGG+T
Sbjct: 241 NLVVDGGLT 249

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score =  114 bits (288), Expect = 7e-31
 Identities = 73/251 (29%), Positives = 105/251 (41%), Gaps = 13/251 (5%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
            +VTG  +GIG    E LA  GA V    R+++  +  L E    G        DL +  
Sbjct: 7   VVVTGAAQGIGRGVAERLAGEGARVLLVDRSELVHEV-LAEILAAGDAAHVHTADLETYA 65

Query: 63  QREKLIETVTSIFQGKLNILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
             + ++      F G++++LINN     + KP      E +      +        +   
Sbjct: 66  GAQGVVRAAVERF-GRVDVLINNVGGTIWAKPYEHYEEEQIEAEIRRSLFPTLWCCRAVL 124

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP- 180
           P       G IV +SS+   RGI  +  Y A KG +N LT +LA E A+D IR N VAP 
Sbjct: 125 PHMLERQQGVIVNVSSIA-TRGIYRIP-YSAAKGGVNALTASLAFEHARDGIRVNAVAPG 182

Query: 181 ------WVIKTSMIKPFEEGPE-GSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASY 233
                   I  +     E+        +D     + +GR G  DE    + FL    ASY
Sbjct: 183 GTEAPPRKIPRNAAPMSEQEKVWYQRIVDQTLDSSLMGRYGTIDEQVRAILFLASDEASY 242

Query: 234 ITGQIICVDGG 244
           ITG ++ V GG
Sbjct: 243 ITGTVLPVGGG 253

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase

 Score =  113 bits (286), Expect = 9e-31
 Identities = 72/254 (28%), Positives = 110/254 (43%), Gaps = 31/254 (12%)

Query: 7   GGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGS---VCDLSSRE 62
                I  A  +  A  GA +V T         A      ++  K   +     D++S E
Sbjct: 3   ADDNSIAWAIAKAAAEEGAEVVLTTWP-----PALRMGAVDELAKELPADVIPLDVTSDE 57

Query: 63  QREKLIETVTSIFQGKLNILINNAA----IAFVKPTVDITAEDMS---TVSSTNFESVFH 115
             ++L E V     GK++ L+++ A    I   KP +D + E       +S+ +F S   
Sbjct: 58  DIDELFEKVKEDG-GKIDFLVHSIAMSPEIRKGKPYLDTSREGFLKALDISAYSFIS--- 113

Query: 116 LSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
           L++ A PL      GSIV +S +   R  P     G  K A+  L + LA E  +  IR 
Sbjct: 114 LAKAAKPLMNE--GGSIVALSYIAAERVFPGYGGMGVAKAALESLARYLAYELGRKGIRV 171

Query: 176 NTVAPWVIKT---SMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAAS 232
           NT++    KT   S I  F+      + ++      P+GR    +EV++  AFL    A 
Sbjct: 172 NTISAGPTKTTAGSGIGGFD------KMVEYAEEMAPLGRNASAEEVANAAAFLLSDLAR 225

Query: 233 YITGQIICVDGGVT 246
            ITGQI+ VDGG +
Sbjct: 226 GITGQILYVDGGFS 239

Length = 239

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score =  114 bits (286), Expect = 1e-30
 Identities = 67/243 (27%), Positives = 112/243 (46%), Gaps = 8/243 (3%)

Query: 3   ALVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           A+VTG +RGIG A    LA  G A+    + +    D  + E +  G +      D++  
Sbjct: 8   AIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADA 67

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
               +L +   + F G++++L+NNA +  +    D   ED     +TN    F + + A 
Sbjct: 68  AAVTRLFDAAETAF-GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAA 126

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
                   G I+ +S+      +P    Y A K A+  L   LA E     I  N VAP 
Sbjct: 127 R--HLGQGGRIINLSTSVIALPLPGYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPG 184

Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
            + T +        + +E +D +A   P+ R G P+E+++ VAFL  P  +++ GQ++ V
Sbjct: 185 PVATELFF----NGKSAEQIDQLAGLAPLERLGTPEEIAAAVAFLAGPDGAWVNGQVLRV 240

Query: 242 DGG 244
           +GG
Sbjct: 241 NGG 243

Length = 245

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score =  113 bits (285), Expect = 1e-30
 Identities = 71/254 (27%), Positives = 110/254 (43%), Gaps = 19/254 (7%)

Query: 2   TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
             LVTG +RG+G A     AR GA +V    R+    +A   E   +   +   V D   
Sbjct: 2   VVLVTGASRGLGAAIARSFAREGARVVVNYYRSTESAEAVAAEAGERAIAIQADVRD--- 58

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFV------KPTVDITAEDMSTVSSTNFESVF 114
           R+Q + +IE   + F G ++ ++NNA I F       K    I  ED         +   
Sbjct: 59  RDQVQAMIEEAKNHF-GPVDTIVNNALIDFPFDPDQRKTFDTIDWEDYQQQLEGAVKGAL 117

Query: 115 HLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIR 174
           +L Q   P FK  G+G ++ I +      +     Y   K A+   T+N+A E     I 
Sbjct: 118 NLLQAVLPDFKERGSGRVINIGTNLFQNPVVPYHDYTTAKAALLGFTRNMAKELGPYGIT 177

Query: 175 TNTVAPWVIKTSMIKPFEEGPEGS--EFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAAS 232
            N V+  ++K        +    +  E  D IA+ TP+G+   P +++  V F   P A 
Sbjct: 178 VNMVSGGLLKV------TDASAATPKEVFDAIAQTTPLGKVTTPQDIADAVLFFASPWAR 231

Query: 233 YITGQIICVDGGVT 246
            +TGQ + VDGG+ 
Sbjct: 232 AVTGQNLVVDGGLV 245

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score =  113 bits (286), Expect = 2e-30
 Identities = 77/270 (28%), Positives = 119/270 (44%), Gaps = 44/270 (16%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE-LDARLHEWKNKGFKVTGSVCDLSSR 61
           ALVTGGT+GIG ATV  L   GA V T +R++ + L             V     DL++ 
Sbjct: 12  ALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDLPE----------GVEFVAADLTTA 61

Query: 62  EQREKLIETVTSIFQGKLNILINNA--AIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
           E    +   V     G ++IL++    + A       +T E+     + N  +   L + 
Sbjct: 62  EGCAAVARAVLERL-GGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRA 120

Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSL-YGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
             P   A G+G I+ ++S+     +P  +  Y A K A++  +K+L+ E A   +R NTV
Sbjct: 121 LLPGMIARGSGVIIHVTSIQRRLPLPESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTV 180

Query: 179 APWVIKTSMIKPFEEGPEGSE-FLDGIARQT------------------PIGRAGEPDEV 219
           +P  I+T          E +    + +A                     P+GR  EP+EV
Sbjct: 181 SPGWIET----------EAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPEEV 230

Query: 220 SSLVAFLCLPAASYITGQIICVDGGVTVTV 249
           + L+AFL    A+ ITG    +DGG   TV
Sbjct: 231 AELIAFLASDRAASITGTEYVIDGGTVPTV 260

Length = 260

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score =  113 bits (285), Expect = 2e-30
 Identities = 72/245 (29%), Positives = 109/245 (44%), Gaps = 7/245 (2%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           TAL+TGGT GIG  T  +    GA V    R+   L+A   E    G        D    
Sbjct: 8   TALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL---GESALVIRADAGDV 64

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
             ++ L + +   F G+L+ +  NA +A   P  D          +TN +  + L Q   
Sbjct: 65  AAQKALAQALAEAF-GRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALL 123

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           PL   +   SIV   S+    G+P+ S+Y A K A+  L K L+ E     IR N V+P 
Sbjct: 124 PLL--ANPASIVLNGSINAHIGMPNSSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPG 181

Query: 182 VIKTSMIKPFEEGPEGSEFL-DGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
            ++T +           + +   I    P+GR G P+E++  V +L    +++I G  I 
Sbjct: 182 PVQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIAKAVLYLASDESAFIVGSEII 241

Query: 241 VDGGV 245
           VDGG+
Sbjct: 242 VDGGM 246

Length = 249

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  113 bits (285), Expect = 2e-30
 Identities = 77/257 (29%), Positives = 111/257 (43%), Gaps = 24/257 (9%)

Query: 2   TALVTGGTR--GIGHATVEELARFGAIV--HTCSRNQIELDARLH---------EWKNKG 48
            ALVTG +R  GIG A    LA  G  +     S     +   +H         E ++ G
Sbjct: 7   IALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYG 66

Query: 49  FKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSST 108
            +      DLS      ++   V+    G  +ILINNAA +      ++TAE +    + 
Sbjct: 67  VRCEHMEIDLSQPYAPNRVFYAVSERL-GDPSILINNAAYSTHTRLEELTAEQLDKHYAV 125

Query: 109 NFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-IPSVSLYGAYKGAMNQLTKNLACE 167
           N  +   LS      +     G I+ ++S G   G +P    Y A KGA+   TK+LA E
Sbjct: 126 NVRATMLLSSAFAKQYDGKAGGRIINLTS-GQSLGPMPDELAYAATKGAIEAFTKSLAPE 184

Query: 168 WAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLC 227
            A+  I  N V P         P + G    E    +  + P GR GEP + + L+AFL 
Sbjct: 185 LAEKGITVNAVNP--------GPTDTGWITEELKHHLVPKFPQGRVGEPVDAARLIAFLV 236

Query: 228 LPAASYITGQIICVDGG 244
              A +ITGQ+I  +GG
Sbjct: 237 SEEAKWITGQVIHSEGG 253

Length = 256

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score =  111 bits (278), Expect = 1e-29
 Identities = 83/244 (34%), Positives = 124/244 (50%), Gaps = 11/244 (4%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           ALVTG + GIG      L   GAIV        +L+A   E    G +V     +LS R+
Sbjct: 9   ALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL---GERVKIFPANLSDRD 65

Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLS-QLAH 121
           + + L +   +  +G ++IL+NNA I      V ++ ED  +V   N  + F L+ +L H
Sbjct: 66  EVKALGQKAEADLEG-VDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTH 124

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P+ +    G I+ I+SV GV G P  + Y A K  M   +K+LA E A  N+  N VAP 
Sbjct: 125 PMMRRR-YGRIINITSVVGVTGNPGQANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPG 183

Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
            I+++M     +  +     + I    P+ R G   EV+S VA+L    A+Y+TGQ I V
Sbjct: 184 FIESAMTGKLNDKQK-----EAIMGAIPMKRMGTGAEVASAVAYLASSEAAYVTGQTIHV 238

Query: 242 DGGV 245
           +GG+
Sbjct: 239 NGGM 242

Length = 245

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score =  111 bits (280), Expect = 1e-29
 Identities = 49/190 (25%), Positives = 90/190 (47%), Gaps = 2/190 (1%)

Query: 1   MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLS 59
            TAL+TG + GIG    ++LAR G  +   +R + +L+A   E ++K G +V     DLS
Sbjct: 7   KTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLS 66

Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
             E  E+L + +     G +++L+NNA      P ++++ ++   +   N  ++  L++ 
Sbjct: 67  DPEALERLEDELKERG-GPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKA 125

Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
             P     G G I+ I S  G+   P +++Y A K  +   ++ L  E     ++   V 
Sbjct: 126 VLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKAFVLSFSEALREELKGTGVKVTAVC 185

Query: 180 PWVIKTSMIK 189
           P   +T    
Sbjct: 186 PGPTRTEFFD 195

Length = 265

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score =  110 bits (278), Expect = 2e-29
 Identities = 60/227 (26%), Positives = 103/227 (45%), Gaps = 11/227 (4%)

Query: 1   MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
             AL+TG + GIG AT   LA  GA V   +R +  L+A   E             D++ 
Sbjct: 7   KVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALAL--ALDVTD 64

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
           R   E  IE +   F G+++IL+NNA +A   P  +   +D   +  TN + + + ++  
Sbjct: 65  RAAVEAAIEALPEEF-GRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAV 123

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
            P      +G I+ + S+ G    P  ++YGA K A+   +  L  E A   IR   ++P
Sbjct: 124 LPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAAVRAFSLGLRQELAGTGIRVTVISP 183

Query: 181 WVIKTSMIK--PFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAF 225
            +++T+      FE   E ++ +      T +     P++++  V F
Sbjct: 184 GLVETTEFSTVRFEGDDERADKV--YKGGTAL----TPEDIAEAVLF 224

Length = 246

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score =  111 bits (279), Expect = 2e-29
 Identities = 78/249 (31%), Positives = 118/249 (47%), Gaps = 9/249 (3%)

Query: 3   ALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           ALVTGGT+G+G A     A  GA  +  C RN  + +A+  E +  G K      DLS  
Sbjct: 9   ALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDV 68

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           E   +++      F G+L+ L+N A +      +D + E      + N  + F L Q A 
Sbjct: 69  EDCRRVVAAADEAF-GRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAI 127

Query: 122 PLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
            L +     G+IV I S+    G P ++ Y A KGA+  LT+N A    ++ IR N +  
Sbjct: 128 KLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCASKGALATLTRNAAYALLRNRIRVNGLNI 187

Query: 181 -WVI---KTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG 236
            W+    +  + + F   P+   +L+  A   P GR  +PDEV+  VAFL    +  +TG
Sbjct: 188 GWMATEGEDRIQREFHGAPDD--WLEKAAATQPFGRLLDPDEVARAVAFLLSDESGLMTG 245

Query: 237 QIICVDGGV 245
            +I  D  V
Sbjct: 246 SVIDFDQSV 254

Length = 260

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  109 bits (275), Expect = 4e-29
 Identities = 58/188 (30%), Positives = 88/188 (46%), Gaps = 1/188 (0%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            AL+TG  RGIG A    LA+ G  V   +R +  L A   E +  G KV  +  D+S  
Sbjct: 9   NALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDY 68

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           E+    IE + +   G ++ILINNA I+     +++   +   +   N   V++ ++   
Sbjct: 69  EEVTAAIEQLKNEL-GSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVL 127

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P      +G I+ ISS  G +G    S Y A K  +  LT++L  E  K NIR   + P 
Sbjct: 128 PSMIERQSGDIINISSTAGQKGAAVTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPS 187

Query: 182 VIKTSMIK 189
            + T M  
Sbjct: 188 TVATDMAV 195

Length = 239

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score =  109 bits (275), Expect = 4e-29
 Identities = 57/196 (29%), Positives = 81/196 (41%), Gaps = 7/196 (3%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           A++TGG  GIG AT + L + GA V    RN+    A   +  N   K T   CD++S E
Sbjct: 3   AIITGGASGIGLATAKLLLKKGAKVAILDRNENPGAAAELQAINPKVKATFVQCDVTSWE 62

Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKP--TVDITAEDMSTVSSTNFESVFHLSQLA 120
           Q     +     F G+++ILINNA I   K                  N   V + + LA
Sbjct: 63  QLAAAFKKAIEKF-GRVDILINNAGILDEKSYLFAGKLPPPWEKTIDVNLTGVINTTYLA 121

Query: 121 HPLFKAS---GNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEW-AKDNIRTN 176
                 +     G IV I SV G+   P   +Y A K  +   T++LA     K  +R N
Sbjct: 122 LHYMDKNKGGKGGVIVNIGSVAGLYPAPQFPVYSASKHGVVGFTRSLADLLEYKTGVRVN 181

Query: 177 TVAPWVIKTSMIKPFE 192
            + P    T ++    
Sbjct: 182 AICPGFTNTPLLPDLV 197

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score =  108 bits (271), Expect = 2e-28
 Identities = 75/277 (27%), Positives = 111/277 (40%), Gaps = 55/277 (19%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           T ++TG   GIG AT E L   G  V       I +D R  +             DLS+ 
Sbjct: 1   TIVITGAASGIGAATAELLEDAGHTV-------IGIDLREADVI----------ADLSTP 43

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           E R   I  V +   G L+ L+N A +                V   N+  +  L +   
Sbjct: 44  EGRAAAIADVLARCSGVLDGLVNCAGVGGTTVAGL--------VLKVNYFGLRALMEALL 95

Query: 122 PLFKASGNGSIVFISSVGGV---------------------------RGIPSVSLYGAYK 154
           P  +     + V +SS+ G                             G P    Y   K
Sbjct: 96  PRLRKGHGPAAVVVSSIAGAGWAQDKLELAKALAAGTEARAVALAEHAGQPGYLAYAGSK 155

Query: 155 GAMNQLTKNLACEWAKD-NIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRA 213
            A+   T+  A  W     +R NTVAP  ++T +++ F + P G E +D     TP+GR 
Sbjct: 156 EALTVWTRRRAATWLYGAGVRVNTVAPGPVETPILQAFLQDPRGGESVDAFV--TPMGRR 213

Query: 214 GEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVTVN 250
            EPDE++ ++AFL   AAS+I G  + VDGG+  ++ 
Sbjct: 214 AEPDEIAPVIAFLASDAASWINGANLFVDGGLDASMR 250

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score =  107 bits (269), Expect = 2e-28
 Identities = 56/228 (24%), Positives = 94/228 (41%), Gaps = 20/228 (8%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            ALVTG +RGIG      LAR G  V    RN  +L A        G  V     D    
Sbjct: 2   VALVTGASRGIGIEIARALARDGYRVSLGLRNPEDLAALSAS----GGDVEAVPYDARDP 57

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           E    L++ +   F G++++L++NA I       + +  ++    S N  +   L++   
Sbjct: 58  EDARALVDALRDRF-GRIDVLVHNAGIGRPTTLREGSDAELEAHFSINVIAPAELTRALL 116

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P  + +G+G +VF++S+ G R +   + Y A K A+  L   L  E     +R + V P 
Sbjct: 117 PALREAGSGRVVFLNSLSGKRVLAGNAGYSASKFALRALAHALRQEGWDHGVRVSAVCPG 176

Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAG--EPDEVSSLVAFLC 227
            + T M               G+            +P ++++LV  + 
Sbjct: 177 FVDTPM-------------AQGLTLVGAFPPEEMIQPKDIANLVRMVI 211

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score =  108 bits (270), Expect = 2e-28
 Identities = 83/249 (33%), Positives = 121/249 (48%), Gaps = 19/249 (7%)

Query: 3   ALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           A+VTG   G+G      LA  G  IV        E   ++     +   +T    DL   
Sbjct: 13  AVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTA---DLRKI 69

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           +    L+E   + F G ++IL+NNA +   +  ++ + +D   V + N +SVF +SQ A 
Sbjct: 70  DGIPALLERAVAEF-GHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAA 128

Query: 122 PLFKASGN-GSIVFISSV----GGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTN 176
             F A GN G I+ I+S+    GG+R +PS   Y A K  +  +T+ +A EWAK NI  N
Sbjct: 129 KHFIAQGNGGKIINIASMLSFQGGIR-VPS---YTASKSGVMGVTRLMANEWAKHNINVN 184

Query: 177 TVAPWVIKTSMIKPFEEGPEGS-EFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT 235
            +AP  + T+  +      + S E LD I    P GR G P ++   V FL   A+ YI 
Sbjct: 185 AIAPGYMATNNTQQLRADEQRSAEILDRI----PAGRWGLPSDLMGPVVFLASSASDYIN 240

Query: 236 GQIICVDGG 244
           G  I VDGG
Sbjct: 241 GYTIAVDGG 249

Length = 253

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score =  107 bits (270), Expect = 3e-28
 Identities = 54/189 (28%), Positives = 85/189 (44%), Gaps = 4/189 (2%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             L+TGG  GIG     E A+ GA V     N+   +   +  +  G KV    CD+S R
Sbjct: 1   IVLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNVRKAGGKVHYYKCDVSKR 60

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           E+  +  + +     G + ILINNA +   K  +++  E++      N  + F  ++   
Sbjct: 61  EEVYEAAKKIKKEV-GDVTILINNAGVVSGKKLLELPDEEIEKTFEVNTLAHFWTTKAFL 119

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACE---WAKDNIRTNTV 178
           P      +G IV I+SV G+     ++ Y A K A     ++L  E   + K  I+T  V
Sbjct: 120 PDMLERNHGHIVTIASVAGLISPAGLADYCASKAAAVGFHESLRLELKAYGKPGIKTTLV 179

Query: 179 APWVIKTSM 187
            P+ I T M
Sbjct: 180 CPYFINTGM 188

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score =  107 bits (269), Expect = 3e-28
 Identities = 75/255 (29%), Positives = 105/255 (41%), Gaps = 28/255 (10%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSR----------NQIELDARLHEWKNKGFKVT 52
           A VTG   GIG      LA+ GA V                 IE   R      +  ++ 
Sbjct: 11  AFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGR------RAIQIA 64

Query: 53  GSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFES 112
               D++S+      +    +   G L + +N A IA   P  ++  E   TV   N   
Sbjct: 65  A---DVTSKADLRAAVARTEAEL-GALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTG 120

Query: 113 VFHLSQLAHPLFKASGNGSIVFISSVGGV---RGIPSVSLYGAYKGAMNQLTKNLACEWA 169
           VF   Q        +G GSIV I+S+ G+   RG+   + Y A K  +  L+K+LA EW 
Sbjct: 121 VFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGL-LQAHYNASKAGVIHLSKSLAMEWV 179

Query: 170 KDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLP 229
              IR N+++P    T    P    PE          QTP+ R  + DE+     FL   
Sbjct: 180 GRGIRVNSISPGYTAT----PMNTRPEMVHQTKLFEEQTPMQRMAKVDEMVGPAVFLLSD 235

Query: 230 AASYITGQIICVDGG 244
           AAS+ TG  + VDGG
Sbjct: 236 AASFCTGVDLLVDGG 250

Length = 254

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score =  107 bits (269), Expect = 4e-28
 Identities = 73/251 (29%), Positives = 109/251 (43%), Gaps = 13/251 (5%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           TAL+TG  RGIG A  +   R GA V     N     A   E       ++  V D +S 
Sbjct: 5   TALITGSARGIGRAFAQAYVREGARVAIADINLEAARATAAEIGPAACAISLDVTDQASI 64

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           ++    +  +   + G ++IL+NNAA+  + P VDIT E    + + N      + Q   
Sbjct: 65  DR---CVAALVDRW-GSIDILVNNAALFDLAPIVDITRESYDRLFAINVSGTLFMMQAVA 120

Query: 122 PLFKASGNG-SIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
               A G G  I+ ++S  G RG   V +Y A K A+  LT++      +  I  N +AP
Sbjct: 121 RAMIAQGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAP 180

Query: 181 WVIKT-------SMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASY 233
            V+         +    +E  P G E    +    P GR G  ++++ +  FL    A Y
Sbjct: 181 GVVDGEHWDGVDAKFARYENRPRG-EKKRLVGEAVPFGRMGRAEDLTGMAIFLASTDADY 239

Query: 234 ITGQIICVDGG 244
           I  Q   VDGG
Sbjct: 240 IVAQTYNVDGG 250

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score =  106 bits (266), Expect = 8e-28
 Identities = 54/179 (30%), Positives = 86/179 (48%), Gaps = 3/179 (1%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            AL+TGG++GIG A  E L   G  V   +R+Q EL+    E  NKG  V G   D+   
Sbjct: 8   VALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKG-NVLGLAADVRDE 66

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
              ++ ++ + + F G L++LI NA +    P  ++T E+   V  TN    F+  + A 
Sbjct: 67  ADVQRAVDAIVAAF-GGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAV 125

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
           P  K  G G I+ ISS+ G       + Y A K  +   ++    +  +  I+ +T+ P
Sbjct: 126 PALKRGG-GYIINISSLAGTNFFAGGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMP 183

Length = 237

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score =  106 bits (266), Expect = 9e-28
 Identities = 73/246 (29%), Positives = 104/246 (42%), Gaps = 12/246 (4%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG-FKVTGSVCDLSSR 61
           A+VTGG  GIG     +    G  V   +    E  A   E +    F V G V D +  
Sbjct: 4   AIVTGGGHGIGKQICLDFLEAGDKV-VFADIDEERGADFAEAEGPNLFFVHGDVADETLV 62

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
               K +        G++++L+NNAA         +  E+   + S N    + LS+   
Sbjct: 63  ----KFVVYAMLEKLGRIDVLVNNAARGSKGILSSLLLEEWDRILSVNLTGPYELSRYCR 118

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
                   G I+ I+S    +  P    Y A KG +  LT  LA     D IR N ++P 
Sbjct: 119 DELIK-NKGRIINIASTRAFQSEPDSEAYAASKGGLVALTHALAMSLGPD-IRVNCISPG 176

Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
            I T+  + F   P   E       Q P GR G P ++++LV FLC   A +ITG+   V
Sbjct: 177 WINTTEQQEFTAAPLTQEDHA----QHPAGRVGTPKDIANLVLFLCQQDAGFITGETFIV 232

Query: 242 DGGVTV 247
           DGG+T 
Sbjct: 233 DGGMTK 238

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative

 Score =  106 bits (265), Expect = 1e-27
 Identities = 76/245 (31%), Positives = 113/245 (46%), Gaps = 11/245 (4%)

Query: 4   LVTGGTRGIGHATVEELAR--FGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           LVTG +RGIG A    LA   F   VH     + + ++ +   + +G        D++ R
Sbjct: 2   LVTGASRGIGRAIANRLAADGFEICVH-YHSGRSDAESVVSAIQAQGGNARLLQFDVADR 60

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQ-LA 120
                L+E   +   G    ++ NA I        ++ ED   V  TN +  +++     
Sbjct: 61  VACRTLLEADIAE-HGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCT 119

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
            P+ +A   G I+ ++SV GV G      Y A K  +   TK LA E AK  I  N +AP
Sbjct: 120 MPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGATKALAVELAKRKITVNCIAP 179

Query: 181 WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
            +I T M+   E        LD   +  P+ R G+P EV+SL  FL    ASY+T Q+I 
Sbjct: 180 GLIDTEMLAEVEHD------LDEALKTVPMNRMGQPAEVASLAGFLMSDGASYVTRQVIS 233

Query: 241 VDGGV 245
           V+GG+
Sbjct: 234 VNGGM 238

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score =  106 bits (265), Expect = 1e-27
 Identities = 70/247 (28%), Positives = 109/247 (44%), Gaps = 2/247 (0%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           TA+VTGG  GIG AT    A  GA V     N+   +    + + KG       CD++ R
Sbjct: 5   TAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDR 64

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           +  +  +        G +++L+NNA      P           + + N     H+     
Sbjct: 65  DSVDTAVAAAEQAL-GPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVL 123

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P     G G IV I+S     G    ++Y A KG +   +K +A E A+  I  N V P 
Sbjct: 124 PGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPG 183

Query: 182 VIKTSMIKPFEEGPE-GSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
              T+++     G E   +  +   R  P+GR G+PD++   + F     AS+ITGQ++ 
Sbjct: 184 PTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILFFSSDDASFITGQVLS 243

Query: 241 VDGGVTV 247
           V GG+T+
Sbjct: 244 VSGGLTM 250

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score =  106 bits (266), Expect = 1e-27
 Identities = 77/259 (29%), Positives = 114/259 (44%), Gaps = 27/259 (10%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSS 60
             L+TG ++GIG A  E  A  G  +H  +R+   L+A   + +   G  V     DLSS
Sbjct: 9   RVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSS 68

Query: 61  REQREKLIETVTSIFQGKLNILINNA-AIAFVKPTVDITAEDMSTVSSTNFESVF---HL 116
            E RE+L      I     +IL+NNA AI    P   +   D +   +     VF    L
Sbjct: 69  PEAREQLAAEAGDI-----DILVNNAGAI----PGGGLDDVDDAAWRAGWELKVFGYIDL 119

Query: 117 SQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTN 176
           ++LA+P  KA G+G IV +    G           A   A+   T+ L  +   D +R  
Sbjct: 120 TRLAYPRMKARGSGVIVNVIGAAGENPDADYICGSAGNAALMAFTRALGGKSLDDGVRVV 179

Query: 177 TVAPW---------VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLC 227
            V P          ++K        +     E L G+    P+GR   P+EV+ LVAFL 
Sbjct: 180 GVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGL----PLGRPATPEEVADLVAFLA 235

Query: 228 LPAASYITGQIICVDGGVT 246
            P + Y +G ++ VDGG++
Sbjct: 236 SPRSGYTSGTVVTVDGGIS 254

Length = 259

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score =  105 bits (265), Expect = 2e-27
 Identities = 83/248 (33%), Positives = 119/248 (47%), Gaps = 17/248 (6%)

Query: 2   TALVTG--GTRGIGHATVEELARFGAIV-----HTCSRNQIELDARLHEWKNKGFKVTGS 54
             LVT   GT GIG AT       GA V     H   R   E    L      G +V   
Sbjct: 19  VVLVTAAAGT-GIGSATARRALEEGARVVISDIHE--RRLGETADELAAELGLG-RVEAV 74

Query: 55  VCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVF 114
           VCD++S  Q + LI+       G+L++L+NNA +    P VD+T ++ S V        F
Sbjct: 75  VCDVTSEAQVDALIDAAVERL-GRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTF 133

Query: 115 HLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNI 173
             ++ A    +A G  G IV  +SV G R     + Y A K  +  LT+  A E A+  +
Sbjct: 134 RATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAAAKAGVMALTRCSALEAAEYGV 193

Query: 174 RTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASY 233
           R N VAP +     + PF      +E LD +A +   GRA EP EV++++AFL    +SY
Sbjct: 194 RINAVAPSI----AMHPFLAKVTSAELLDELAAREAFGRAAEPWEVANVIAFLASDYSSY 249

Query: 234 ITGQIICV 241
           +TG+++ V
Sbjct: 250 LTGEVVSV 257

Length = 262

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score =  105 bits (263), Expect = 2e-27
 Identities = 85/254 (33%), Positives = 118/254 (46%), Gaps = 21/254 (8%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK----GFKVTGSVCD 57
            ALVTGG+RGIG AT   LA+ G   +T + N  +      E  N     G K      D
Sbjct: 3   IALVTGGSRGIGRATALLLAQEG---YTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQAD 59

Query: 58  LSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD-ITAEDMSTVSSTNFESVF-- 114
           +S   Q   +   +       L  L+NNA I F + TV+ +TAE ++ V STN    F  
Sbjct: 60  ISDENQVVAMFTAIDQH-DEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLC 118

Query: 115 ---HLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSL-YGAYKGAMNQLTKNLACEWAK 170
               + ++A         G+IV +SS     G P   + Y A KGA++ LT  L+ E A 
Sbjct: 119 CREAVKRMALK--HGGSGGAIVNVSSAASRLGAPGEYVDYAASKGAIDTLTTGLSLEVAA 176

Query: 171 DNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPA 230
             IR N V P  I T M      G E    +D +    P+ R G+P+EV+  + +L    
Sbjct: 177 QGIRVNCVRPGFIYTEM---HASGGEPGR-VDRVKSNIPMQRGGQPEEVAQAIVWLLSDK 232

Query: 231 ASYITGQIICVDGG 244
           ASY+TG  I + GG
Sbjct: 233 ASYVTGSFIDLAGG 246

Length = 247

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score =  105 bits (264), Expect = 3e-27
 Identities = 69/250 (27%), Positives = 107/250 (42%), Gaps = 8/250 (3%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSS 60
           ALVTG  +GIG A     AR GA V     +    +           G +V     D++ 
Sbjct: 10  ALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTD 69

Query: 61  REQ-REKLIETVTSIFQGKLNILINNAAI-AFVKPTVDITAEDMSTVSSTNFESVFHLSQ 118
                  +     +   G L++L+NNA I  F  P + +T ED     + + +  ++  +
Sbjct: 70  AASVAAAVAAAEEAF--GPLDVLVNNAGINVFADP-LAMTDEDWRRCFAVDLDGAWNGCR 126

Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
              P     G GSIV I+S    + IP    Y   K  +  LT+ L  E+A  N+R N +
Sbjct: 127 AVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPVAKHGLLGLTRALGIEYAARNVRVNAI 186

Query: 179 APWVIKTSMIKP-FEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ 237
           AP  I+T + +  +   P+ +          P+ R G P+EV+    FL    A +I   
Sbjct: 187 APGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEEVAMTAVFLASDEAPFINAT 246

Query: 238 IICVDGGVTV 247
            I +DGG +V
Sbjct: 247 CITIDGGRSV 256

Length = 260

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  103 bits (260), Expect = 8e-27
 Identities = 81/255 (31%), Positives = 122/255 (47%), Gaps = 25/255 (9%)

Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQ 63
           ++TGG +G+G A  E LA+ GA +     NQ +L+  + E    G +V G   +++  E 
Sbjct: 9   VITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEED 68

Query: 64  REKLIETVTSIFQGKLNILINNAAIA----FVKPTVDITAEDMS-----TVSSTNFESVF 114
            E     +   F G+LN LINNA I      VK         MS     +V   N   VF
Sbjct: 69  VEATFAQIAEDF-GQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVF 127

Query: 115 HLSQLAHPLFKASGN-GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNI 173
              + A      SG+ G I+ ISS+    G    + Y A K  +  +T   A E A+  I
Sbjct: 128 LCGREAAAKMIESGSKGVIINISSIARA-GNMGQTNYSASKAGVAAMTVTWAKELARYGI 186

Query: 174 RTNTVAPWVIKTSM---IKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPA 230
           R   +AP VI+T M   +KP        E L+ + +  P+GR GEP+E++  V F+    
Sbjct: 187 RVAAIAPGVIETEMTAAMKP--------EALERLEKMIPVGRLGEPEEIAHTVRFII--E 236

Query: 231 ASYITGQIICVDGGV 245
             Y+TG+++ +DGG+
Sbjct: 237 NDYVTGRVLEIDGGL 251

Length = 253

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score =  104 bits (260), Expect = 9e-27
 Identities = 71/249 (28%), Positives = 114/249 (45%), Gaps = 15/249 (6%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRN-QIELDARLHEWKNKGFKVTGSVCDLSSR 61
           ALVTG +RGIG     +L   GA V+   R    +L     E + +G K     CD S  
Sbjct: 6   ALVTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGTAEEIEARGGKCIPVRCDHSDD 65

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAF-------VKPTVDITAEDMSTVSSTNFESVF 114
           ++ E L E V    QG+L+IL+NNA  A         KP  +        +++    + +
Sbjct: 66  DEVEALFERVAREQQGRLDILVNNAYAAVQLILVGVAKPFWEEPPTIWDDINNVGLRAHY 125

Query: 115 HLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIR 174
             S  A PL   +G G IV ISS GG+  + +V+ YG  K A++++  ++A E     + 
Sbjct: 126 ACSVYAAPLMVKAGKGLIVIISSTGGLEYLFNVA-YGVGKAAIDRMAADMAHELKPHGVA 184

Query: 175 TNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVS--SLVAFLCLPAAS 232
             ++ P  ++T ++    E  EGS      A++      GE  E S   +VA    P   
Sbjct: 185 VVSLWPGFVRTELVLEMPEDDEGSW----HAKERDAFLNGETTEYSGRCVVALAADPDLM 240

Query: 233 YITGQIICV 241
            ++G+++  
Sbjct: 241 ELSGRVLIT 249

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score =  103 bits (259), Expect = 1e-26
 Identities = 81/248 (32%), Positives = 120/248 (48%), Gaps = 11/248 (4%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHT-CSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           ALVTG +RGIG A    LA  GA+V     RN+   D  + E ++ G K      DL+S 
Sbjct: 9   ALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSI 68

Query: 62  EQREKLIETVTSIFQ-----GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHL 116
           +  +KL+E + +  Q      +++IL+NNA I       + T E    + + N ++ F L
Sbjct: 69  DGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFL 128

Query: 117 SQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTN 176
            Q   PL +A G   ++ ISS     G      YG  KGA+N +T  LA    +  I  N
Sbjct: 129 IQQTLPLLRAEGR--VINISSAEVRLGFTGSIAYGLSKGALNTMTLPLAKHLGERGITVN 186

Query: 177 TVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG 236
           T+ P   KT +     + PE   F       +  GR G+ ++++  VAFL    + ++TG
Sbjct: 187 TIMPGYTKTDINAKLLDDPEIRNF---ATNSSVFGRIGQVEDIADAVAFLASSDSRWVTG 243

Query: 237 QIICVDGG 244
           QII V GG
Sbjct: 244 QIIDVSGG 251

Length = 254

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score =  103 bits (259), Expect = 1e-26
 Identities = 76/253 (30%), Positives = 110/253 (43%), Gaps = 15/253 (5%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             +V+G   G+G       AR GA V   +R    LD    E  + G +      D++  
Sbjct: 7   VVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDE 66

Query: 62  EQREKLIETVTSIFQGKLNILINNA-AIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
           +Q   L+      F G+++ L+NNA  +  +KP  D        V   N      L+Q  
Sbjct: 67  DQCANLVALALERF-GRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAF 125

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAY---KGAMNQLTKNLACEWAKDNIRTNT 177
            P    SG GSIV I+S+  +R   S   YGAY   KGA+   +++LA E     IR N+
Sbjct: 126 TPALAESG-GSIVMINSMV-LR--HSQPKYGAYKMAKGALLAASQSLATELGPQGIRVNS 181

Query: 178 VAPWVIKTSMIKPF------EEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAA 231
           VAP  I    +K +      + G    +     A  + + R    DEV+S V FL    A
Sbjct: 182 VAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVASAVLFLASDLA 241

Query: 232 SYITGQIICVDGG 244
             ITGQ + V+ G
Sbjct: 242 RAITGQTLDVNCG 254

Length = 258

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score =  102 bits (257), Expect = 1e-26
 Identities = 58/195 (29%), Positives = 87/195 (44%), Gaps = 8/195 (4%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           ALVTG +RGIG AT   L   G  V  C+R++  L A   +   +   V G   D+    
Sbjct: 3   ALVTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAAQ---ELEGVLGLAGDVRDEA 59

Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
              + ++ +   F G L+ L+NNA +  +KP  ++T E+   V  TN    F+    A P
Sbjct: 60  DVRRAVDAMEEAF-GGLDALVNNAGVGVMKPVEELTPEEWRLVLDTNLTGAFYCIHKAAP 118

Query: 123 LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWV 182
                G G+IV + S+ G       + Y A K  +  L++    +  + NIR   V P  
Sbjct: 119 ALLRRGGGTIVNVGSLAGKNAFKGGAAYNASKFGLLGLSEAAMLDLREANIRVVNVMPGS 178

Query: 183 IKTSMIKPFEEGPEG 197
           + T     F   PEG
Sbjct: 179 VDTG----FAGSPEG 189

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score =  103 bits (258), Expect = 2e-26
 Identities = 69/258 (26%), Positives = 115/258 (44%), Gaps = 25/258 (9%)

Query: 1   MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
           + A+VTGG  G+G ATVE L   GA V             + +  +    V     D++S
Sbjct: 3   LVAVVTGGASGLGLATVERLLAQGAKVVILDLPN-SPGETVAKLGDNCRFVP---VDVTS 58

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD------ITAEDMSTVSSTNFESVF 114
            +  +  +    + F G+L+I++N A IA    T +       + E    V + N    F
Sbjct: 59  EKDVKAALALAKAKF-GRLDIVVNCAGIAVAAKTYNKKGQQPHSLELFQRVINVNLIGTF 117

Query: 115 HLSQLAHP-LFKASGN-----GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEW 168
           ++ +LA   + K   +     G I+  +SV    G    + Y A KG +  +T  +A + 
Sbjct: 118 NVIRLAAGAMGKNEPDQGGERGVIINTASVAAFEGQIGQAAYSASKGGIVGMTLPIARDL 177

Query: 169 AKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPI-GRAGEPDEVSSLVAFLC 227
           A   IR  T+AP +  T ++    E  +  +FL   A+Q P   R G+P E + LV  + 
Sbjct: 178 APQGIRVVTIAPGLFDTPLLAGLPE--KVRDFL---AKQVPFPSRLGDPAEYAHLVQHII 232

Query: 228 LPAASYITGQIICVDGGV 245
                Y+ G++I +DG +
Sbjct: 233 E--NPYLNGEVIRLDGAI 248

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  102 bits (257), Expect = 2e-26
 Identities = 78/257 (30%), Positives = 112/257 (43%), Gaps = 24/257 (9%)

Query: 2   TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
           T LVTGG+RG+G A     AR GA +V    +++   +A   E  ++   +   V D   
Sbjct: 7   TVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTD--- 63

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFV------KPTVDITAEDMSTVSSTNFESVF 114
           REQ + +  T T  F   +  ++NNA   F       K   DIT ED       + +   
Sbjct: 64  REQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGAL 123

Query: 115 HLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSL--YGAYKGAMNQLTKNLACEWAKDN 172
           +  Q A P  +  G G I+ I +   +   P V    Y   K A+  LT+NLA E     
Sbjct: 124 NTIQAALPGMREQGFGRIINIGT--NLFQNPVVPYHDYTTAKAALLGLTRNLAAELGPYG 181

Query: 173 IRTNTVAPWVIKT---SMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLP 229
           I  N V+  +++T   S   P        E  D IA  TP+ +   P E +  V F   P
Sbjct: 182 ITVNMVSGGLLRTTDASAATP-------DEVFDLIAATTPLRKVTTPQEFADAVLFFASP 234

Query: 230 AASYITGQIICVDGGVT 246
            A  +TGQ + VDGG+ 
Sbjct: 235 WARAVTGQNLVVDGGLV 251

Length = 253

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score =  102 bits (257), Expect = 3e-26
 Identities = 79/265 (29%), Positives = 114/265 (43%), Gaps = 34/265 (12%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           AL+TGG  GIG A VE     GA V    R+  +L +    + +    V     D++S  
Sbjct: 9   ALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGD---HVLVVEGDVTSYA 65

Query: 63  QREKLIETVTSIFQGKLNILINNAAI-AFVKPTVDITAEDMST----VSSTNFESVFHLS 117
             ++ ++     F GKL+  + NA I  +    VDI AE + T    + + N +     +
Sbjct: 66  DNQRAVDQTVDAF-GKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGA 124

Query: 118 QLAHPLFKASGNGSIVFISSVGGV---RGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIR 174
           + A P  KASG GS++F  S        G P   LY A K A+  L + LA E A   IR
Sbjct: 125 KAALPALKASG-GSMIFTLSNSSFYPGGGGP---LYTASKHAVVGLVRQLAYELAPK-IR 179

Query: 175 TNTVAPWVIKTSMIKPFEEGPEG-----------SEFLDGIARQTPIGRAGEPDEVSSLV 223
            N VAP    T +      GP                 D IA  TP+  A +P++ +   
Sbjct: 180 VNGVAPGGTVTDL-----RGPASLGQGETSISDSPGLADMIAAITPLQFAPQPEDHTGPY 234

Query: 224 AFLCLPAAS-YITGQIICVDGGVTV 247
             L     S  +TG +I  DGG+ +
Sbjct: 235 VLLASRRNSRALTGVVINADGGLGI 259

Length = 263

>gnl|CDD|181417 PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydrogenase; Provisional

 Score =  101 bits (254), Expect = 6e-26
 Identities = 73/253 (28%), Positives = 121/253 (47%), Gaps = 12/253 (4%)

Query: 2   TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLS 59
           T +++GGTRGIG A V E A+ G  I  T + N  E +    + + K G K      ++ 
Sbjct: 10  TLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNIL 69

Query: 60  SREQREKLIETVTSIFQGKLNILINNAAI---AFV---KPTVDITAEDMSTVSSTNFESV 113
             E  ++L + +   F  +++  I+NA I   A V      + +  + ++ + +    + 
Sbjct: 70  EPETYKELFKKIDEDFD-RVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAF 128

Query: 114 FHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNI 173
              +Q A    +  G GSI+ +SS G +  I + + +G  K A+  + K  A E  + NI
Sbjct: 129 VVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENYAGHGTSKAAVETMVKYAATELGEKNI 188

Query: 174 RTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASY 233
           R N V+   I T  +K F       E        +P+ R G+P++++    FLC   AS+
Sbjct: 189 RVNAVSGGPIDTDALKAF---TNYEEVKAKTEELSPLNRMGQPEDLAGACLFLCSEKASW 245

Query: 234 ITGQIICVDGGVT 246
           +TGQ I VDGG T
Sbjct: 246 LTGQTIVVDGGTT 258

Length = 260

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score =  100 bits (252), Expect = 1e-25
 Identities = 57/191 (29%), Positives = 82/191 (42%), Gaps = 13/191 (6%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLH------------EWKNKGF 49
            A VTG +RGIG A    LA+ GA V   ++   E D                E +  G 
Sbjct: 5   VAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIEAAGG 64

Query: 50  KVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTN 109
           +    V D+   +Q   L+E     F G+L+IL+NNA   ++    D  A+    +   N
Sbjct: 65  QALPIVVDVRDEDQVRALVEATVDQF-GRLDILVNNAGAIWLSLVEDTPAKRFDLMQRVN 123

Query: 110 FESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA 169
               + LSQ A P    +G G I+ IS    +R       Y A K  M++LT  LA E  
Sbjct: 124 LRGTYLLSQAALPHMVKAGQGHILNISPPLSLRPARGDVAYAAGKAGMSRLTLGLAAELR 183

Query: 170 KDNIRTNTVAP 180
           +  I  N++ P
Sbjct: 184 RHGIAVNSLWP 194

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score =  100 bits (251), Expect = 1e-25
 Identities = 73/244 (29%), Positives = 116/244 (47%), Gaps = 7/244 (2%)

Query: 3   ALVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           A VTGG  GIG +  + L + G  +V  C  N       L + K  GF    S  ++   
Sbjct: 6   AYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDW 65

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           +  +   + V +   G++++L+NNA I        +T ED + V  TN  S+F++++   
Sbjct: 66  DSTKAAFDKVKAEV-GEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVI 124

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
                 G G I+ ISSV G +G    + Y   K  ++  T +LA E A   +  NTV+P 
Sbjct: 125 DGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPG 184

Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
            I T M+K         + L+ I    P+ R G PDE+ S+VA+L    + + TG    +
Sbjct: 185 YIGTDMVKAIRP-----DVLEKIVATIPVRRLGSPDEIGSIVAWLASEESGFSTGADFSL 239

Query: 242 DGGV 245
           +GG+
Sbjct: 240 NGGL 243

Length = 246

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score =  100 bits (251), Expect = 2e-25
 Identities = 73/252 (28%), Positives = 119/252 (47%), Gaps = 19/252 (7%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             ++TGG+ G+G A  +  A  GA V    R + +L+    E +    +V     D+ + 
Sbjct: 3   VVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNP 62

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           E  +K++E +   F G+++ LINNAA  F+ P  D++    ++V        F+ SQ   
Sbjct: 63  EDVQKMVEQIDEKF-GRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVG 121

Query: 122 PLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKD-NIRTNTVA 179
             +   G  G+I+ + +       P V    A K  +  +T+ LA EW +   IR N +A
Sbjct: 122 KYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIA 181

Query: 180 PWVIKTSMIKPFEEGPEGSEFL---DGIARQT----PIGRAGEPDEVSSLVAFLCLPAAS 232
           P  I         E   G++ L   +  A++T    P+GR G P+E++ L  FL    A+
Sbjct: 182 PGPI---------ERTGGADKLWESEEAAKRTIQSVPLGRLGTPEEIAGLAYFLLSDEAA 232

Query: 233 YITGQIICVDGG 244
           YI G  I +DGG
Sbjct: 233 YINGTCITMDGG 244

Length = 252

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score =  100 bits (250), Expect = 2e-25
 Identities = 54/185 (29%), Positives = 86/185 (46%), Gaps = 1/185 (0%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
            L+TG + GIG A   E A+ G  V   +R    LD    E  N    V   + D++  E
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAARRTDRLDELKAELLNPNPSVEVEILDVTDEE 60

Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
           + + +I  +     G L+++I NA +       D++ +       TN      + + A P
Sbjct: 61  RNQLVIAEL-EAELGGLDLVIINAGVGKGTSLGDLSFKAFRETIDTNLLGAAAILEAALP 119

Query: 123 LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWV 182
            F+A G G +V ISSV  +RG+P  + Y A K A++ L ++L  +  K  IR   + P  
Sbjct: 120 QFRAKGRGHLVLISSVAALRGLPGAAAYSASKAALSSLAESLRYDVKKRGIRVTVINPGF 179

Query: 183 IKTSM 187
           I T +
Sbjct: 180 IDTPL 184

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score =  100 bits (250), Expect = 2e-25
 Identities = 77/248 (31%), Positives = 118/248 (47%), Gaps = 17/248 (6%)

Query: 3   ALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           A++TG   G+G      LA+ GA IV        E  A++     K   +T    DL  +
Sbjct: 11  AIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITA---DLIQQ 67

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           +  + ++     +  G ++ILINNA I   +  ++   +D   V + N ++VF LSQ   
Sbjct: 68  KDIDSIVSQAVEVM-GHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVA 126

Query: 122 PLFKASGNG-SIVFISSV----GGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTN 176
             F   GNG  I+ I+S+    GG+R +PS   Y A K A+  LT+ LA E ++ NI  N
Sbjct: 127 KQFVKQGNGGKIINIASMLSFQGGIR-VPS---YTASKSAVMGLTRALATELSQYNINVN 182

Query: 177 TVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG 236
            +AP  + T            +E    I  + P  R G PD+++    FL   A+ Y+TG
Sbjct: 183 AIAPGYMATDNTAALRADTARNE---AILERIPASRWGTPDDLAGPAIFLSSSASDYVTG 239

Query: 237 QIICVDGG 244
             + VDGG
Sbjct: 240 YTLAVDGG 247

Length = 251

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  100 bits (250), Expect = 2e-25
 Identities = 83/256 (32%), Positives = 119/256 (46%), Gaps = 24/256 (9%)

Query: 3   ALVTGGTR--GIGHATVEELARFGA-IVHTCSRNQ-------IELDARLH---EWKNKGF 49
           A+VTG +R  GIG A  +ELA  GA I  T            ++ D ++    E    G 
Sbjct: 9   AVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGV 68

Query: 50  KVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTN 109
           KV+    DL+  +  ++L+  VT    G  +IL+NNAA +      ++TAE++      N
Sbjct: 69  KVSSMELDLTQNDAPKELLNKVTEQL-GYPHILVNNAAYSTNNDFSNLTAEELDKHYMVN 127

Query: 110 FESVFHLS-QLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEW 168
             +   LS Q A    K SG G I+ ++S      +     Y A KGA++ LT +LA E 
Sbjct: 128 VRATTLLSSQFARGFDKKSG-GRIINMTSGQFQGPMVGELAYAATKGAIDALTSSLAAEV 186

Query: 169 AKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCL 228
           A   I  N + P         P + G    E   G+    P GR GEP + + L+ FL  
Sbjct: 187 AHLGITVNAINP--------GPTDTGWMTEEIKQGLLPMFPFGRIGEPKDAARLIKFLAS 238

Query: 229 PAASYITGQIICVDGG 244
             A +ITGQII  +GG
Sbjct: 239 EEAEWITGQIIHSEGG 254

Length = 256

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score =  100 bits (251), Expect = 2e-25
 Identities = 62/207 (29%), Positives = 87/207 (42%), Gaps = 23/207 (11%)

Query: 1   MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ---IELDARLH-EWKNKGFKVTGSVC 56
              ++TG   GIG  T  ELA+ GA V    RN+    E  A +  E  N   KV     
Sbjct: 2   KVVVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNA--KVEVIQL 59

Query: 57  DLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHL 116
           DLSS     +  E   + F  +L+ILINNA I    P   +T +      + N+   F L
Sbjct: 60  DLSSLASVRQFAEEFLARF-PRLDILINNAGIMA--PPRRLTKDGFELQFAVNYLGHFLL 116

Query: 117 SQLAHPLFKASGNGSIVFISSVGGVRGI-----------PSVSLYGAY---KGAMNQLTK 162
           + L  P+ KAS    IV +SS+    G               S Y AY   K A    T+
Sbjct: 117 TNLLLPVLKASAPSRIVNVSSIAHRAGPIDFNDLDLENNKEYSPYKAYGQSKLANILFTR 176

Query: 163 NLACEWAKDNIRTNTVAPWVIKTSMIK 189
            LA       +  N + P V++T +++
Sbjct: 177 ELARRLEGTGVTVNALHPGVVRTELLR 203

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score =  100 bits (250), Expect = 3e-25
 Identities = 59/185 (31%), Positives = 89/185 (48%), Gaps = 3/185 (1%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             ++TG + GIG A    LAR GA +   +RN+  L +   E  + G +      D+S  
Sbjct: 3   VVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDA 62

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITA-EDMSTVSSTNFESVFHLSQLA 120
           E  E+LIE   + F G ++IL+NNA I       ++T       V   N+    + +  A
Sbjct: 63  EACERLIEAAVARF-GGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAA 121

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
            P  KAS  G IV +SS+ G+ G+P+ S Y A K A++    +L  E A D +    V P
Sbjct: 122 LPHLKAS-RGQIVVVSSLAGLTGVPTRSGYAASKHALHGFFDSLRIELADDGVAVTVVCP 180

Query: 181 WVIKT 185
             + T
Sbjct: 181 GFVAT 185

Length = 263

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score = 99.8 bits (249), Expect = 3e-25
 Identities = 76/257 (29%), Positives = 119/257 (46%), Gaps = 29/257 (11%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSV--CDLS 59
            A++TGG  GIG AT   LA  GA V       +  D      K    +V G     D++
Sbjct: 9   VAVITGGGSGIGLATARRLAAEGATV-------VVGDIDPEAGKAAADEVGGLFVPTDVT 61

Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMST-----VSSTNFESVF 114
             +    L +T    + G ++I  NNA I+   P  D +  +        V   N  SV+
Sbjct: 62  DEDAVNALFDTAAETY-GSVDIAFNNAGIS---PPEDDSILNTGLDAWQRVQDVNLTSVY 117

Query: 115 HLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSL-YGAYKGAMNQLTKNLACEWAKDNI 173
              + A P     G GSI+  +S   V G  +  + Y A KG +  +++ L  ++A+  I
Sbjct: 118 LCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTASKGGVLAMSRELGVQFARQGI 177

Query: 174 RTNTVAPWVIKTSMIKP-FEEGPEGSEFLDGIARQ---TPIGRAGEPDEVSSLVAFLCLP 229
           R N + P  + T +++  F + PE +      AR+    P+GR  EP+E+++ VAFL   
Sbjct: 178 RVNALCPGPVNTPLLQELFAKDPERA------ARRLVHVPMGRFAEPEEIAAAVAFLASD 231

Query: 230 AASYITGQIICVDGGVT 246
            AS+IT     VDGG++
Sbjct: 232 DASFITASTFLVDGGIS 248

Length = 255

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 99.5 bits (248), Expect = 4e-25
 Identities = 76/249 (30%), Positives = 118/249 (47%), Gaps = 13/249 (5%)

Query: 3   ALVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            ++TG +RGIG AT    A  G A+     RN+   +A +   + +G +      D++  
Sbjct: 5   MIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADE 64

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD-ITAEDMSTVSSTNFESVFHLSQLA 120
               +L E V     G+L+ L+NNA I   +  ++ + A  ++ + +TN    F  ++ A
Sbjct: 65  ADVLRLFEAVDREL-GRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREA 123

Query: 121 ----HPLFKASGNGSIVFISSVGGVRGIPSVSL-YGAYKGAMNQLTKNLACEWAKDNIRT 175
                      G G+IV +SS+    G P   + Y A KGA++ +T  LA E A + IR 
Sbjct: 124 VKRMSTRHGGRG-GAIVNVSSMAARLGSPGEYIDYAASKGAIDTMTIGLAKEVAAEGIRV 182

Query: 176 NTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT 235
           N V P VI T +      G E    +D +    P+GR G  +EV+  + +L    ASY T
Sbjct: 183 NAVRPGVIYTEI---HASGGEPGR-VDRVKAGIPMGRGGTAEEVARAILWLLSDEASYTT 238

Query: 236 GQIICVDGG 244
           G  I V GG
Sbjct: 239 GTFIDVSGG 247

Length = 248

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 99.5 bits (248), Expect = 5e-25
 Identities = 72/255 (28%), Positives = 103/255 (40%), Gaps = 26/255 (10%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           TALVTG   GIG A        G  V     +   L A      +  F      CDL+  
Sbjct: 4   TALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARF--VPVACDLTDA 61

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
                 +    +   G +++L+ NA  A      D T       ++ N E+ +   +   
Sbjct: 62  ASLAAALANAAAER-GPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVL 120

Query: 122 PLFKASGNGSIVFISSVGGVR--GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
                   G++V I SV G+   G P+   Y A K  +   TK LA E+ +  IR N VA
Sbjct: 121 EGMLKRSRGAVVNIGSVNGMAALGHPA---YSAAKAGLIHYTKLLAVEYGRFGIRANAVA 177

Query: 180 PWVIKTSMIKP--------FEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAA 231
           P  +KT   +         FEE          + +  P+     PD+V++ V FL  PAA
Sbjct: 178 PGTVKTQAWEARVAANPQVFEE----------LKKWYPLQDFATPDDVANAVLFLASPAA 227

Query: 232 SYITGQIICVDGGVT 246
             ITG  + VDGG+T
Sbjct: 228 RAITGVCLPVDGGLT 242

Length = 257

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 98.3 bits (245), Expect = 1e-24
 Identities = 79/249 (31%), Positives = 120/249 (48%), Gaps = 11/249 (4%)

Query: 2   TALVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
             L+TG +RGIG AT    A  G ++    +R+    +      +  G +      D+++
Sbjct: 4   VVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVAN 63

Query: 61  REQREKLIETVTSIFQGKLNILINNAAI-AFVKPTVDITAEDMSTVSSTNFESVFHLS-Q 118
                 + + V S F G+L+ L+NNA I A   P  D+ A  +  +  TN    +  + +
Sbjct: 64  EADVIAMFDAVQSAF-GRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCARE 122

Query: 119 LAHPLFKASGN--GSIVFISSVGGVRGIPSVSL-YGAYKGAMNQLTKNLACEWAKDNIRT 175
            A  L    G   G+IV +SS+    G P+  + Y   KGA++ LT  LA E     +R 
Sbjct: 123 AARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGSKGAVDTLTLGLAKELGPHGVRV 182

Query: 176 NTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT 235
           N V P +I+T  I      P  +  L     QTP+GRAGE DEV+  + +L   AASY+T
Sbjct: 183 NAVRPGLIETE-IHASGGQPGRAARLGA---QTPLGRAGEADEVAETIVWLLSDAASYVT 238

Query: 236 GQIICVDGG 244
           G ++ V GG
Sbjct: 239 GALLDVGGG 247

Length = 248

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 98.3 bits (245), Expect = 1e-24
 Identities = 73/253 (28%), Positives = 115/253 (45%), Gaps = 19/253 (7%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQ---IELDARLHEWKNKGFKVTGSVCDLS 59
           ALVTG + G+G    + LA+ GA V   SR      EL A +         V+  V D  
Sbjct: 12  ALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQ 71

Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
           S +      ET      G ++IL+NN+ ++  +  VD+T  D   V  TN    F ++Q 
Sbjct: 72  SIKAAVAHAETEA----GTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQE 127

Query: 120 AHPLFKASGNGS--------IVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKD 171
                 A   G+        I+ I+SV G+R +P + LY   K A+  +T+ +A EW + 
Sbjct: 128 VAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIGLYCMSKAAVVHMTRAMALEWGRH 187

Query: 172 NIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAA 231
            I  N + P  I T +     E  +G + +  + R+    R G+P+++  L+  L    +
Sbjct: 188 GINVNAICPGYIDTEINHHHWETEQGQKLVSMLPRK----RVGKPEDLDGLLLLLAADES 243

Query: 232 SYITGQIICVDGG 244
            +I G II  D G
Sbjct: 244 QFINGAIISADDG 256

Length = 258

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score = 98.0 bits (244), Expect = 2e-24
 Identities = 76/254 (29%), Positives = 117/254 (46%), Gaps = 9/254 (3%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELD-ARLHEWKNKGFKVTGSVCDLSSR 61
           A  T  ++GIG      LAR GA V   SRN+  L  AR          V+  V DL+ R
Sbjct: 11  AFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKR 70

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           E  E+ ++ + +I  G+ +I   +         ++++ ED             +L++   
Sbjct: 71  EDLERTVKELKNI--GEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALV 128

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P  +  G G I++ +SV     IP+++L    + +M  L + LA E     I  N + P 
Sbjct: 129 PAMERKGFGRIIYSTSVAIKEPIPNIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPG 188

Query: 182 VIKTSMI------KPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT 235
           +I+T  +      +   EG    E L   A+  P+GR GEP+E+  LVAFL     SYI 
Sbjct: 189 IIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEEIGYLVAFLASDLGSYIN 248

Query: 236 GQIICVDGGVTVTV 249
           G +I VDGG   +V
Sbjct: 249 GAMIPVDGGRLNSV 262

Length = 263

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score = 97.6 bits (243), Expect = 4e-24
 Identities = 74/246 (30%), Positives = 113/246 (45%), Gaps = 7/246 (2%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK--NKGFKVTGSVCDLS 59
           T LVTGG  GIG      L   GA V    RN  +L A   E +       V     D++
Sbjct: 9   TYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVT 68

Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQ 118
             +Q  + ++  T+ + G+L+ +++ A  +  + P   I ++        N     ++ +
Sbjct: 69  DEDQVARAVDAATA-WHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLK 127

Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
            A       G GS V ISS+           YG  K A++ L K  A E     +R N++
Sbjct: 128 HAARELVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMKLAADELGPSWVRVNSI 187

Query: 179 APWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI 238
            P +I+T ++ P  E PE           TP+ R GE ++V++L  FL   AAS+ITGQ+
Sbjct: 188 RPGLIRTDLVAPITESPE---LSADYRACTPLPRVGEVEDVANLAMFLLSDAASWITGQV 244

Query: 239 ICVDGG 244
           I VDGG
Sbjct: 245 INVDGG 250

Length = 276

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 96.3 bits (239), Expect = 6e-24
 Identities = 79/252 (31%), Positives = 119/252 (47%), Gaps = 19/252 (7%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIV--HTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
           ALVTG +RGIG A  + LA  GA+V  H  +R + E +  ++E ++ G        +L S
Sbjct: 7   ALVTGASRGIGRAIAKRLANDGALVAIHYGNRKE-EAEETVYEIQSNGGSAFSIGANLES 65

Query: 61  REQREKLIETVTSIFQG-----KLNILINNAAI---AFVKPTVDITAEDMSTVSSTNFES 112
               E L  ++ +  Q      K +ILINNA I   AF++ T   T +    + S N ++
Sbjct: 66  LHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEET---TEQFFDRMVSVNAKA 122

Query: 113 VFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDN 172
            F + Q A    +   N  I+ ISS      +P    Y   KGA+N +T  LA +     
Sbjct: 123 PFFIIQQALSRLR--DNSRIINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLGARG 180

Query: 173 IRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAAS 232
           I  N + P  IKT M       P   ++   I   +   R GE ++++   AFL  P + 
Sbjct: 181 ITVNAILPGFIKTDMNAELLSDPMMKQYATTI---SAFNRLGEVEDIADTAAFLASPDSR 237

Query: 233 YITGQIICVDGG 244
           ++TGQ+I V GG
Sbjct: 238 WVTGQLIDVSGG 249

Length = 252

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score = 97.2 bits (242), Expect = 6e-24
 Identities = 81/250 (32%), Positives = 116/250 (46%), Gaps = 19/250 (7%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDAR--LHEWKNKGFKVTGSVCDLSS 60
           AL+TG   GIG AT    AR GA +      + E DA   +   + +G K      DL  
Sbjct: 58  ALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKD 117

Query: 61  REQREKLIETVTSIFQGKLNILINNAAI-AFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
                +L+E       G L+IL+N A     VK   DIT E       TN  ++F L + 
Sbjct: 118 EAFCRQLVERAVKELGG-LDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKA 176

Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
           A P        SI+   S+   +  P++  Y + K A+   TK LA + A+  IR N VA
Sbjct: 177 AIPHLPPGA--SIINTGSIQSYQPSPTLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVA 234

Query: 180 P---W-VIKTSMIKPFEEGPE-GSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYI 234
           P   W  ++ S  +P E+ P+ GSE        TP+ R G+P E++ L   L    +SY+
Sbjct: 235 PGPVWTPLQPSGGQPPEKIPDFGSE--------TPMKRPGQPVEMAPLYVLLASQESSYV 286

Query: 235 TGQIICVDGG 244
           TG++  V GG
Sbjct: 287 TGEVFGVTGG 296

Length = 300

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 95.4 bits (238), Expect = 9e-24
 Identities = 55/190 (28%), Positives = 88/190 (46%), Gaps = 8/190 (4%)

Query: 2   TALVTGGTRGIGHATVEELAR--FGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLS 59
             ++TG +RGIG A  EEL +    ++V   +R++ E    L E    G +VT    DLS
Sbjct: 1   VIILTGASRGIGRALAEELLKRGSPSVVVLLARSE-EPLQELKEELRPGLRVTTVKADLS 59

Query: 60  SREQREKLIETVTSIFQGKLNILINNAA-IAFVKPTVDITAEDMSTVSSTNFESVFHLSQ 118
                E+L+E +  +  G+ ++LINNA  +  V     I  +++      N  S   L+ 
Sbjct: 60  DAAGVEQLLEAIRKLD-GERDLLINNAGSLGPVSKIEFIDLDELQKYFDLNLTSPVCLTS 118

Query: 119 LAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
                FK  G   ++V +SS   V       LY + K A +   + LA E  + ++R  +
Sbjct: 119 TLLRAFKKRGLKKTVVNVSSGAAVNPFKGWGLYCSSKAARDMFFRVLAAE--EPDVRVLS 176

Query: 178 VAPWVIKTSM 187
            AP V+ T M
Sbjct: 177 YAPGVVDTDM 186

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 99.5 bits (248), Expect = 1e-23
 Identities = 77/256 (30%), Positives = 109/256 (42%), Gaps = 15/256 (5%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF---KVTGSVCDLS 59
           A VTGG  GIG  T   LA  GA V     N    +A   E  N  F   +      D++
Sbjct: 417 AFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEI-NGQFGAGRAVALKMDVT 475

Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
             +  +     V   + G ++I++NNA IA   P  + T ++            F +++ 
Sbjct: 476 DEQAVKAAFADVALAY-GGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVARE 534

Query: 120 AHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
           A    +  G  G+IVFI+S   V    + S Y A K A   L + LA E     IR NTV
Sbjct: 535 AFRQMREQGLGGNIVFIASKNAVYAGKNASAYSAAKAAEAHLARCLAAEGGTYGIRVNTV 594

Query: 179 AP-WVIKTSMIKPFE--------EGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLP 229
            P  V++ S I   E         G    E  +  A++T + R   P +++  V FL   
Sbjct: 595 NPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIFPADIAEAVFFLASS 654

Query: 230 AASYITGQIICVDGGV 245
            +   TG II VDGGV
Sbjct: 655 KSEKTTGCIITVDGGV 670

Length = 676

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 95.8 bits (239), Expect = 1e-23
 Identities = 75/262 (28%), Positives = 115/262 (43%), Gaps = 33/262 (12%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQI--ELDARLHEWKNKGFKVTGSVCDLS 59
             +VTG  +GIG       A  GA V    R+++  E+ A L      G +      DL 
Sbjct: 10  VVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRA---AGGEALALTADLE 66

Query: 60  SREQREKLIETVTSIFQGKLNILINN--AAIAFVKP-----TVDITAEDMSTVSSTNFES 112
           +    +  +      F G++++LINN    I + KP        I AE    +  + F +
Sbjct: 67  TYAGAQAAMAAAVEAF-GRIDVLINNVGGTI-WAKPFEEYEEEQIEAE----IRRSLFPT 120

Query: 113 VFHLSQLAHPLFKASGNGSIVFISSV--GGVRGIPSVSLYGAYKGAMNQLTKNLACEWAK 170
           ++   +   P   A G G+IV +SS+   G+  +P    Y A KG +N LT +LA E+A+
Sbjct: 121 LW-CCRAVLPHMLAQGGGAIVNVSSIATRGINRVP----YSAAKGGVNALTASLAFEYAE 175

Query: 171 DNIRTNTVAPWVIKTSMIK----PFEEGPEGSEFLDGIARQT----PIGRAGEPDEVSSL 222
             IR N VAP   +    +       +  +   +   I  QT     + R G  DE  + 
Sbjct: 176 HGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTIDEQVAA 235

Query: 223 VAFLCLPAASYITGQIICVDGG 244
           + FL    ASYITG ++ V GG
Sbjct: 236 ILFLASDEASYITGTVLPVGGG 257

Length = 260

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 95.4 bits (238), Expect = 1e-23
 Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 5/188 (2%)

Query: 1   MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVC--DL 58
            T L+TG + GIG AT    A+ GA +    R    L   L +     F V       D+
Sbjct: 1   KTVLITGASSGIGEATARRFAKAGAKLILTGRRAERLQE-LADELGAKFPVKVLPLQLDV 59

Query: 59  SSREQREKLIETVTSIFQGKLNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLS 117
           S RE  E  +E +   F+  ++IL+NNA +A  + P  +   ED  T+  TN + + +++
Sbjct: 60  SDRESIEAALENLPEEFR-DIDILVNNAGLALGLDPAQEADLEDWETMIDTNVKGLLNVT 118

Query: 118 QLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
           +L  P+  A   G I+ + S+ G       ++Y A K A+ Q + NL  +     IR   
Sbjct: 119 RLILPIMIARNQGHIINLGSIAGRYPYAGGNVYCATKAAVRQFSLNLRKDLIGTGIRVTN 178

Query: 178 VAPWVIKT 185
           + P +++T
Sbjct: 179 IEPGLVET 186

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|187630 cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) reductase (ENR), divergent SDR

 Score = 94.2 bits (235), Expect = 4e-23
 Identities = 75/260 (28%), Positives = 116/260 (44%), Gaps = 34/260 (13%)

Query: 2   TALVTG--GTRGIGHATVEELARFGA-IVHTC----SRNQIELDARLHEWKNKGFKVTGS 54
             L+TG    R I     + L   GA +  T      R ++E   +L E   +   V   
Sbjct: 3   RILITGIANDRSIAWGIAKALHEAGAELAFTYQPEALRKRVE---KLAERLGESALV--L 57

Query: 55  VCDLSSREQREKLIETVTSIFQGKLNILINNAAIAF------VKPTVDITAEDMSTVSST 108
            CD+S+ E+ ++L   V   + GKL+ L++  +IAF        P +D + +        
Sbjct: 58  PCDVSNDEEIKELFAEVKKDW-GKLDGLVH--SIAFAPKVQLKGPFLDTSRKGFLKALDI 114

Query: 109 NFESVFHLSQLAHPLFKASGNG-SIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACE 167
              S + L  LA         G SIV +S +G  R +P  ++ G  K A+    + LA E
Sbjct: 115 ---SAYSLVSLAKAALPIMNPGGSIVTLSYLGSERVVPGYNVMGVAKAALESSVRYLAYE 171

Query: 168 WAKDNIRTNTVAPWVIKT---SMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVA 224
             +  IR N ++   IKT   S I  F++       L+   ++ P+GR    +EV +  A
Sbjct: 172 LGRKGIRVNAISAGPIKTLAASGITGFDK------MLEYSEQRAPLGRNVTAEEVGNTAA 225

Query: 225 FLCLPAASYITGQIICVDGG 244
           FL    +S ITG+II VDGG
Sbjct: 226 FLLSDLSSGITGEIIYVDGG 245

This bacterial subgroup of ENRs includes Escherichia coli ENR. ENR catalyzes the NAD(P)H-dependent reduction of enoyl-ACP in the last step of fatty acid biosynthesis. De novo fatty acid biosynthesis is catalyzed by the fatty acid synthetase complex, through the serial addition of 2-carbon subunits. In bacteria and plants,ENR catalyzes one of six synthetic steps in this process. Oilseed rape ENR, and also apparently the NADH-specific form of Escherichia coli ENR, is tetrameric. Although similar to the classical SDRs, this group does not have the canonical catalytic tetrad, nor does it have the typical Gly-rich NAD-binding pattern. Such so-called divergent SDRs have a GXXXXXSXA NAD-binding motif and a YXXMXXXK (or YXXXMXXXK) active site motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 93.6 bits (233), Expect = 5e-23
 Identities = 52/183 (28%), Positives = 83/183 (45%), Gaps = 3/183 (1%)

Query: 5   VTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQR 64
           +TG + GIG AT    A  GA V   +R+   L     E +  G +    V D++   Q 
Sbjct: 5   ITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREVRELGGEAIAVVADVADAAQV 64

Query: 65  EKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLF 124
           E+  +T    F G+++  +NNA +A      D+T E+   V   N+    + +  A P  
Sbjct: 65  ERAADTAVERF-GRIDTWVNNAGVAVFGRFEDVTPEEFRRVFDVNYLGHVYGTLAALPHL 123

Query: 125 KASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKD--NIRTNTVAPWV 182
           +  G G+++ + S+ G R  P  + Y A K A+   T++L  E A D   I    V P  
Sbjct: 124 RRRGGGALINVGSLLGYRSAPLQAAYSASKHAVRGFTESLRAELAHDGAPISVTLVQPTA 183

Query: 183 IKT 185
           + T
Sbjct: 184 MNT 186

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score = 93.8 bits (234), Expect = 5e-23
 Identities = 55/191 (28%), Positives = 85/191 (44%), Gaps = 8/191 (4%)

Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIEL----DARLHEWKNKGFKVTGSVCDLS 59
           ++TG + GIG      LAR GA +   +R +  L       L         V     D+S
Sbjct: 7   IITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSECLELGAPSPHVVPL---DMS 63

Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
             E  E+++E    +F G L+ILINNA I+      D + +    +   N+     L++ 
Sbjct: 64  DLEDAEQVVEEALKLF-GGLDILINNAGISMRSLFHDTSIDVDRKIMEVNYFGPVALTKA 122

Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
           A P       GSIV +SS+ G  G+P  + Y A K A+     +L  E ++ NI    V 
Sbjct: 123 ALPHLIERSQGSIVVVSSIAGKIGVPFRTAYAASKHALQGFFDSLRAELSEPNISVTVVC 182

Query: 180 PWVIKTSMIKP 190
           P +I T++   
Sbjct: 183 PGLIDTNIAMN 193

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 93.1 bits (232), Expect = 6e-23
 Identities = 51/190 (26%), Positives = 74/190 (38%), Gaps = 11/190 (5%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           T L+TGGT GIG A   +    G  V    R +     RL E K +   +   V D+   
Sbjct: 7   TVLITGGTSGIGLALARKFLEAGNTVIITGRRE----ERLAEAKKELPNIHTIVLDVGDA 62

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIA----FVKPTVDITAEDMSTVSSTNFESVFHLS 117
           E  E L E + S +   L+ILINNA I        P      +   T   TN      L 
Sbjct: 63  ESVEALAEALLSEYP-NLDILINNAGIQRPIDLRDP--ASDLDKADTEIDTNLIGPIRLI 119

Query: 118 QLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
           +   P  K     +IV +SS      + +  +Y A K A++  T  L  +     +    
Sbjct: 120 KAFLPHLKKQPEATIVNVSSGLAFVPMAANPVYCATKAALHSYTLALRHQLKDTGVEVVE 179

Query: 178 VAPWVIKTSM 187
           + P  + T +
Sbjct: 180 IVPPAVDTEL 189

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 93.1 bits (232), Expect = 8e-23
 Identities = 56/183 (30%), Positives = 86/183 (46%), Gaps = 5/183 (2%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE----WKNKGFKVTGSVCD 57
             L+TGG+ GIG A  +EL + GA V   +R++ +L+  + E        G KV+    D
Sbjct: 3   HVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYISAD 62

Query: 58  LSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLS 117
           LS  E+ E+          G  ++++N A I+      D+TAE+       N+    +++
Sbjct: 63  LSDYEEVEQAFAQAVEKG-GPPDLVVNCAGISIPGLFEDLTAEEFERGMDVNYFGSLNVA 121

Query: 118 QLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
               PL K    G IVF+SS   + GI   S Y   K A+  L ++L  E    NIR + 
Sbjct: 122 HAVLPLMKEQRPGHIVFVSSQAALVGIYGYSAYCPSKFALRGLAESLRQELKPYNIRVSV 181

Query: 178 VAP 180
           V P
Sbjct: 182 VYP 184

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 92.6 bits (230), Expect = 1e-22
 Identities = 56/185 (30%), Positives = 88/185 (47%), Gaps = 1/185 (0%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           ALVTG + GIG AT   LA  GA V   +R    L+A   E + +G K      D++  +
Sbjct: 6   ALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAEGGKALVLELDVTDEQ 65

Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
           Q +  +E       G+L+IL+NNA I  + P  D    D + +  TN   + + +  A P
Sbjct: 66  QVDAAVERTVEAL-GRLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYTTHAALP 124

Query: 123 LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWV 182
                  G+IV ISSV G   + + ++Y A K  +N  ++ L  E  +  +R   + P  
Sbjct: 125 HHLLRNKGTIVNISSVAGRVAVRNSAVYNATKFGVNAFSEGLRQEVTERGVRVVVIEPGT 184

Query: 183 IKTSM 187
           + T +
Sbjct: 185 VDTEL 189

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score = 92.1 bits (229), Expect = 2e-22
 Identities = 72/247 (29%), Positives = 111/247 (44%), Gaps = 24/247 (9%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIV---HTCSRNQIELDARLHEWKNKGFKVTGSVCDL 58
             LV GG+RGIG A V      GA V   +  S++  E  A+           TG+    
Sbjct: 8   KVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQ----------ETGATAVQ 57

Query: 59  SSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQ 118
           +    R+ +I+ V     G L+IL+ NA IA     +++ A+D+  +   N  + +H S 
Sbjct: 58  TDSADRDAVIDVVRK--SGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASV 115

Query: 119 LAHPLFKASGNGSIVFISSVGGVR-GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
            A    +    G I+ I SV G R  +  ++ Y A K A+  + + LA ++    I  N 
Sbjct: 116 EAAR--QMPEGGRIIIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARDFGPRGITINV 173

Query: 178 VAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ 237
           V P  I T         P      D +     I R G P+EV+ +VA+L  P AS++TG 
Sbjct: 174 VQPGPIDTDA------NPANGPMKDMMHSFMAIKRHGRPEEVAGMVAWLAGPEASFVTGA 227

Query: 238 IICVDGG 244
           +  +DG 
Sbjct: 228 MHTIDGA 234

Length = 237

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 91.2 bits (227), Expect = 5e-22
 Identities = 56/186 (30%), Positives = 84/186 (45%), Gaps = 2/186 (1%)

Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQ 63
            +TG   GIG AT    A  G  V     N+  L A   E    G   TG++ D++ R  
Sbjct: 5   FITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAEL-GAGNAWTGAL-DVTDRAA 62

Query: 64  REKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPL 123
            +  +    +   G+L++L NNA I    P  DI  E    V   N + V + +  A P 
Sbjct: 63  WDAALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPY 122

Query: 124 FKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVI 183
            KA+    ++  SS   + G P +++Y A K A+  LT+ L  EW +  IR   V P  +
Sbjct: 123 LKATPGARVINTSSASAIYGQPGLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFV 182

Query: 184 KTSMIK 189
            T+M+ 
Sbjct: 183 DTAMLD 188

Length = 260

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score = 90.5 bits (225), Expect = 1e-21
 Identities = 70/255 (27%), Positives = 108/255 (42%), Gaps = 35/255 (13%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIV---------HTCSRNQIELDARLHEWKNKGFKVT 52
             LVTG   G+G A     A  GA V             ++    D  + E K  G K  
Sbjct: 7   VVLVTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAADKVVDEIKAAGGK-- 64

Query: 53  GSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFES 112
            +V +  S E  EK+++T    F G+++IL+NNA I   +    ++ ED   V   + + 
Sbjct: 65  -AVANYDSVEDGEKIVKTAIDAF-GRVDILVNNAGILRDRSFAKMSEEDWDLVMRVHLKG 122

Query: 113 VFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDN 172
            F +++ A P  +    G I+  SS  G+ G    + Y A K  +  L+  LA E AK N
Sbjct: 123 SFKVTRAAWPYMRKQKFGRIINTSSAAGLYGNFGQANYSAAKLGLLGLSNTLAIEGAKYN 182

Query: 173 IRTNTVAPWVIKTSM---IKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLP 229
           I  NT+AP    + M   + P     +  + L              P+ V+ LV +LC  
Sbjct: 183 ITCNTIAP-AAGSRMTETVMP----EDLFDALK-------------PEYVAPLVLYLC-H 223

Query: 230 AASYITGQIICVDGG 244
            +  +TG +  V  G
Sbjct: 224 ESCEVTGGLFEVGAG 238

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 90.0 bits (224), Expect = 1e-21
 Identities = 58/198 (29%), Positives = 81/198 (40%), Gaps = 15/198 (7%)

Query: 3   ALVTGGTRGIGHATVEEL-ARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            L+TG +RGIG   V +L AR    V    R+       L        ++     D++  
Sbjct: 1   VLITGASRGIGLELVRQLLARGNNTVIATCRDPSAATE-LAALGASHSRLHILELDVTDE 59

Query: 62  EQREKLIETVTS-IFQGKLNILINNAAIAFVKPTVD-ITAEDMSTVSSTNFESVFHLSQL 119
               +  E V   +    L++LINNA I         + +ED+  V   N      L+Q 
Sbjct: 60  IA--ESAEAVAERLGDAGLDVLINNAGILHSYGPASEVDSEDLLEVFQVNVLGPLLLTQA 117

Query: 120 AHPLFKASGNGSIVFISSVGG-----VRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIR 174
             PL        I+ ISS  G       G      Y A K A+N LTK+LA E  +D I 
Sbjct: 118 FLPLLLKGARAKIINISSRVGSIGDNTSG--GWYSYRASKAALNMLTKSLAVELKRDGIT 175

Query: 175 TNTVAP-WVIKTSMIKPF 191
             ++ P WV +T M  PF
Sbjct: 176 VVSLHPGWV-RTDMGGPF 192

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 89.8 bits (223), Expect = 1e-21
 Identities = 52/190 (27%), Positives = 83/190 (43%), Gaps = 2/190 (1%)

Query: 5   VTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQR 64
           +TG   GIG  T    AR G  V     ++  L A   E       V G++ D++ R   
Sbjct: 5   ITGAASGIGRETALLFARNGWFVGLYDIDEDGLAALAAEL-GAENVVAGAL-DVTDRAAW 62

Query: 65  EKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLF 124
              +    +   G+L+ L NNA +    P  D+       +   N + V + +  A P  
Sbjct: 63  AAALADFAAATGGRLDALFNNAGVGRGGPFEDVPLAAHDRMVDINVKGVLNGAYAALPYL 122

Query: 125 KASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIK 184
           KA+    ++  +S   + G P +++Y A K A+  LT+ L  EWA+  IR   V PW + 
Sbjct: 123 KATPGARVINTASSSAIYGQPDLAVYSATKFAVRGLTEALDVEWARHGIRVADVWPWFVD 182

Query: 185 TSMIKPFEEG 194
           T ++   E G
Sbjct: 183 TPILTKGETG 192

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 91.5 bits (228), Expect = 1e-21
 Identities = 49/189 (25%), Positives = 81/189 (42%), Gaps = 9/189 (4%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             ++TG + G+G AT    AR GA V   +R +  L+A   E +  G +    V D++  
Sbjct: 10  VVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADA 69

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           E  +   +       G ++  +NNA +    P  D+T E+   V+   +  V H +  A 
Sbjct: 70  EAVQAAADRAEEEL-GPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAAL 128

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
              +    G+I+ + S    R IP  S Y A K A+   T +L CE   D          
Sbjct: 129 RHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAKHAIRGFTDSLRCELLHDGSP------- 181

Query: 182 VIKTSMIKP 190
            +  +M++P
Sbjct: 182 -VSVTMVQP 189

Length = 334

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score = 88.2 bits (219), Expect = 6e-21
 Identities = 75/256 (29%), Positives = 109/256 (42%), Gaps = 17/256 (6%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           AL+TGG  G+G A VE     GA V    R+  ++     ++ +    V G   D+ S  
Sbjct: 7   ALITGGGSGLGRALVERFVAEGAKVAVLDRSAEKVAELRADFGD---AVVGVEGDVRSLA 63

Query: 63  QREKLIETVTSIFQGKLNILINNAAI-AFVKPTVDITAEDMST----VSSTNFESVFHLS 117
             E+ +      F GKL+  I NA I  +    VDI  E +      +   N +     +
Sbjct: 64  DNERAVARCVERF-GKLDCFIGNAGIWDYSTSLVDIPEEKLDEAFDELFHINVKGYILGA 122

Query: 118 QLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
           + A P   A+  GS++F  S  G        LY A K A+  L K LA E A  +IR N 
Sbjct: 123 KAALPALYAT-EGSVIFTVSNAGFYPGGGGPLYTASKHAVVGLVKQLAYELAP-HIRVNG 180

Query: 178 VAPWVIKTSMIKPFEEGPEGSEF-----LDGIARQTPIGRAGEPDEVSSLVAFLCLPAAS 232
           VAP  + T +  P   G   +        D +    P+G A EP++ +    FL     +
Sbjct: 181 VAPGGMVTDLRGPASLGQGETSISTPPLDDMLKSILPLGFAPEPEDYTGAYVFLASRGDN 240

Query: 233 -YITGQIICVDGGVTV 247
              TG +I  DGG+ V
Sbjct: 241 RPATGTVINYDGGMGV 256

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional

 Score = 87.8 bits (218), Expect = 7e-21
 Identities = 64/241 (26%), Positives = 98/241 (40%), Gaps = 15/241 (6%)

Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQ 63
           LV GG+ GIG A     A  GA V   SR++  L A           V  +  D++    
Sbjct: 1   LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGA-PVRTAALDITDEAA 59

Query: 64  REKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPL 123
            +           G  + ++  AA     P   +          + F   + +++ A   
Sbjct: 60  VDAFFAEA-----GPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAAR-- 112

Query: 124 FKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVI 183
             A G GS+ F+S    VR   S  L GA   A+  L + LA E A   +R NTV+P ++
Sbjct: 113 -IAPG-GSLTFVSGFAAVRPSASGVLQGAINAALEALARGLALELAP--VRVNTVSPGLV 168

Query: 184 KTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVDG 243
            T  +     G          A + P  R G+P++V++ + FL   A  + TG  + VDG
Sbjct: 169 DTP-LWSKLAGDAREAMFAAAAERLPARRVGQPEDVANAILFLA--ANGFTTGSTVLVDG 225

Query: 244 G 244
           G
Sbjct: 226 G 226

Length = 230

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 88.0 bits (218), Expect = 7e-21
 Identities = 59/202 (29%), Positives = 98/202 (48%), Gaps = 9/202 (4%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSV-CDLSSR 61
           ALVTG + GIG A    L + G  V  C+R   +++A   E ++ G+       CDLS+ 
Sbjct: 9   ALVTGASVGIGAAVARALVQHGMKVVGCARRVDKIEALAAECQSAGYPTLFPYQCDLSNE 68

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           EQ   +   + +  QG +++ INNA +A  +P +    E    +   N  ++   ++ A+
Sbjct: 69  EQILSMFSAIRTQHQG-VDVCINNAGLARPEPLLSGKTEGWKEMFDVNVLALSICTREAY 127

Query: 122 PLFKASG--NGSIVFISSVGGVRGIP--SVSLYGAYKGAMNQLTKNLACE--WAKDNIRT 175
              K     +G I+ I+S+ G R  P      Y A K A+  LT+ L  E   AK +IR 
Sbjct: 128 QSMKERNVDDGHIININSMSGHRVPPVSVFHFYAATKHAVTALTEGLRQELREAKTHIRA 187

Query: 176 NTVAPWVIKTSMI-KPFEEGPE 196
            +++P +++T    K  +  PE
Sbjct: 188 TSISPGLVETEFAFKLHDNDPE 209

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 88.3 bits (219), Expect = 7e-21
 Identities = 75/266 (28%), Positives = 115/266 (43%), Gaps = 22/266 (8%)

Query: 1   MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
           M  LVT  +RGIG     EL + GA V   SRN+  L+  L E K  G +V     DLS 
Sbjct: 1   MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYG-EVYAVKADLSD 59

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESV---FHLS 117
           ++  + L++    +  G ++ L+ NA     +P +   A     + +     V   +  +
Sbjct: 60  KDDLKNLVKEAWELL-GGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTT 118

Query: 118 QLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
            L     +    G +V++SSV     +P + L    +  + QL K ++  +    IR  T
Sbjct: 119 LLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGLVQLAKGVSRTYGGKGIRAYT 178

Query: 178 V------APWV------IKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAF 225
           V       P        I       FEE  E  E L+    +TP+ R G  +E+ SL+AF
Sbjct: 179 VLLGSFDTPGARENLARIAEERGVSFEETWE-REVLE----RTPLKRTGRWEELGSLIAF 233

Query: 226 LCLPAASYITGQIICVDGGVTVTVNV 251
           L    A Y+ G  I  DG +T  VN+
Sbjct: 234 LLSENAEYMLGSTIVFDGAMTRGVNL 259

Length = 259

>gnl|CDD|223696 COG0623, FabI, Enoyl-[acyl-carrier-protein]

 Score = 88.0 bits (219), Expect = 9e-21
 Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 20/202 (9%)

Query: 56  CDLSSREQREKLIETVTSIFQGKLNILINNAAIAF------VKPTVDITAEDMSTVSSTN 109
           CD+++ E  + L  T+   + GKL+ L++  +IAF          +D + E        +
Sbjct: 63  CDVTNDESIDALFATIKKKW-GKLDGLVH--SIAFAPKEELKGDYLDTSREGFLIAMDIS 119

Query: 110 FESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA 169
             S   L++ A PL      GSI+ ++ +G  R +P+ ++ G  K A+    + LA +  
Sbjct: 120 AYSFTALAKAARPLMN--NGGSILTLTYLGSERVVPNYNVMGVAKAALEASVRYLAADLG 177

Query: 170 KDNIRTNTVAPWVIKT---SMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFL 226
           K+ IR N ++   I+T   S I  F +       L       P+ R    +EV +  AFL
Sbjct: 178 KEGIRVNAISAGPIRTLAASGIGDFRK------MLKENEANAPLRRNVTIEEVGNTAAFL 231

Query: 227 CLPAASYITGQIICVDGGVTVT 248
               +S ITG+II VD G  + 
Sbjct: 232 LSDLSSGITGEIIYVDSGYHIM 253

Length = 259

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score = 87.6 bits (217), Expect = 1e-20
 Identities = 73/248 (29%), Positives = 115/248 (46%), Gaps = 14/248 (5%)

Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSV-CDLSSRE 62
           +VTGG+RGIG   V      GA V  C+R +    A   E    G      V CD++  E
Sbjct: 13  IVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNRAGPGSCKFVPCDVTKEE 72

Query: 63  QREKLI-ETVTSIFQGKLNILINNAAI-AFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
             + LI  TV     G+++ L+NNA      + T + +A++   + + N  S F  S+ A
Sbjct: 73  DIKTLISVTVERF--GRIDCLVNNAGWHPPHQTTDETSAQEFRDLLNLNLISYFLASKYA 130

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
            P  + S  G+I+ +SS+ G  G    + Y A KGA+  +TK LA + ++  +R N ++P
Sbjct: 131 LPHLRKS-QGNIINLSSLVGSIGQKQAAPYVATKGAITAMTKALAVDESRYGVRVNCISP 189

Query: 181 WVIKTSMIKPFEE----GPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG 236
             I T +   +EE     P+    +        +GR G   E      FL    A++ TG
Sbjct: 190 GNIWTPL---WEELAAQTPDTLATIKEGELAQLLGRMGTEAESGLAALFLA-AEATFCTG 245

Query: 237 QIICVDGG 244
             + + GG
Sbjct: 246 IDLLLSGG 253

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 85.8 bits (213), Expect = 4e-20
 Identities = 60/189 (31%), Positives = 87/189 (46%), Gaps = 7/189 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            AL+TG + GIG AT    A+ G  +   +R+Q  L+A   E ++ G K      DLS+ 
Sbjct: 8   RALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNP 67

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           E     I  +   F G  ++LINNA +A+  P +++   D   V   N  SVF       
Sbjct: 68  EAIAPGIAELLEQF-GCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVL 126

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAY---KGAMNQLTKNLACEWAKDNIRTNTV 178
           P  +A G G I+ +SS+      P    +GAY   K A+   TK LA E     IR  T+
Sbjct: 127 PGMRARGGGLIINVSSIAARNAFPQ---WGAYCVSKAALAAFTKCLAEEERSHGIRVCTI 183

Query: 179 APWVIKTSM 187
               + T +
Sbjct: 184 TLGAVNTPL 192

Length = 241

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score = 86.4 bits (214), Expect = 5e-20
 Identities = 73/256 (28%), Positives = 113/256 (44%), Gaps = 14/256 (5%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRN-QIELDARLHEWKNKGFKVTGSVCDLSSR 61
           ALVTGG  GIG + V    + GA V  C  + Q +L   + +       V    CD++  
Sbjct: 21  ALVTGGATGIGESIVRLFHKHGAKV--CIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVE 78

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSST---NFESVFHLSQ 118
           +   + ++     F G L+I++NNA +    P  DI   ++S        N + VF   +
Sbjct: 79  DDVSRAVDFTVDKF-GTLDIMVNNAGLTG-PPCPDIRNVELSEFEKVFDVNVKGVFLGMK 136

Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
            A  +      GSIV + SV    G      Y   K A+  LT+++A E  K  IR N V
Sbjct: 137 HAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCV 196

Query: 179 APWVIKTSMIKPFEEGPEGSE-----FLDGIARQTPI-GRAGEPDEVSSLVAFLCLPAAS 232
           +P+ + T++        E +E     F     +   + G     D+V++ V FL    A 
Sbjct: 197 SPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVDDVANAVLFLASDEAR 256

Query: 233 YITGQIICVDGGVTVT 248
           YI+G  + +DGG T T
Sbjct: 257 YISGLNLMIDGGFTCT 272

Length = 280

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 85.3 bits (212), Expect = 6e-20
 Identities = 55/191 (28%), Positives = 93/191 (48%), Gaps = 7/191 (3%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSSR 61
           A+VTG T GIG A  EELA+ G  V   SR Q +LDA   E + K G +      D S+ 
Sbjct: 4   AVVTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEEKYGVETKTIAADFSAG 63

Query: 62  EQR-EKLIETVTSIFQGKLNILINNAAIAFVKPTV--DITAEDMSTVSSTNFESVFHLSQ 118
           +   E++ + +  +  G   IL+NN  I+   P    +   +++  + + N  +   +++
Sbjct: 64  DDIYERIEKELEGLDIG---ILVNNVGISHSIPEYFLETPEDELQDIINVNVMATLKMTR 120

Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
           L  P       G+IV ISS  G+   P ++ Y A K  ++  ++ L  E+    I   ++
Sbjct: 121 LILPGMVKRKKGAIVNISSFAGLIPTPLLATYSASKAFLDFFSRALYEEYKSQGIDVQSL 180

Query: 179 APWVIKTSMIK 189
            P+++ T M K
Sbjct: 181 LPYLVATKMSK 191

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|181020 PRK07533, PRK07533, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 85.4 bits (212), Expect = 7e-20
 Identities = 52/201 (25%), Positives = 92/201 (45%), Gaps = 20/201 (9%)

Query: 56  CDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVK------PTVDITAEDMSTVSSTN 109
            D+    Q E +   +   + G+L+ L++  +IAF          VD + E  +     +
Sbjct: 67  LDVREPGQLEAVFARIAEEW-GRLDFLLH--SIAFAPKEDLHGRVVDCSREGFALAMDVS 123

Query: 110 FESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA 169
             S   +++LA PL    G  S++ +S  G  + + + +L G  K A+    + LA E  
Sbjct: 124 CHSFIRMARLAEPLMTNGG--SLLTMSYYGAEKVVENYNLMGPVKAALESSVRYLAAELG 181

Query: 170 KDNIRTNTVAPWVIKT---SMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFL 226
              IR + ++P  +KT   S I  F+        L+  A + P+ R  + D+V ++ AFL
Sbjct: 182 PKGIRVHAISPGPLKTRAASGIDDFDA------LLEDAAERAPLRRLVDIDDVGAVAAFL 235

Query: 227 CLPAASYITGQIICVDGGVTV 247
              AA  +TG  + +DGG  +
Sbjct: 236 ASDAARRLTGNTLYIDGGYHI 256

Length = 258

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 86.4 bits (214), Expect = 7e-20
 Identities = 80/260 (30%), Positives = 120/260 (46%), Gaps = 28/260 (10%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQI--ELDAR--LHEWKNKGFKVTGSVCD 57
            A+VTG   G+G A    LAR GA V     N +   LDA   L E +  G K      D
Sbjct: 14  VAVVTGAAAGLGRAEALGLARLGATVVV---NDVASALDASDVLDEIRAAGAKAVAVAGD 70

Query: 58  LSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLS 117
           +S R   ++L+ T   +  G L+I++NNA I   +   +++ E+   V + +    F L+
Sbjct: 71  ISQRATADELVATAVGL--GGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLT 128

Query: 118 QLAHPLF----KASGN---GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAK 170
           + A   +    KA+G    G IV  SS  G+ G    + YGA K  +  LT + A    +
Sbjct: 129 RNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQANYGAAKAGITALTLSAARALGR 188

Query: 171 DNIRTNTVAPWVIKTSMIKP-FEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLP 229
             +R N + P   +T+M    F + P+      GI    P+     P+ V  LV FL  P
Sbjct: 189 YGVRANAICPRA-RTAMTADVFGDAPDVEA--GGI---DPLS----PEHVVPLVQFLASP 238

Query: 230 AASYITGQIICVDGGVTVTV 249
           AA+ + GQ+  V G   VT+
Sbjct: 239 AAAEVNGQVFIVYGP-MVTL 257

Length = 306

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 85.4 bits (212), Expect = 9e-20
 Identities = 54/184 (29%), Positives = 85/184 (46%), Gaps = 3/184 (1%)

Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQ 63
           L+TG + GIG A  E LA  GA +    RN  +L+A        G +    V DL+S   
Sbjct: 9   LLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPG-RHRWVVADLTSEAG 67

Query: 64  REKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPL 123
           RE ++     +  G +N+LINNA +       D   E +  + + N  +   L++   PL
Sbjct: 68  REAVLARAREM--GGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPL 125

Query: 124 FKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVI 183
            +A  +  +V + S  G  G P  + Y A K A+   ++ L  E A   +R   +AP   
Sbjct: 126 LRAQPSAMVVNVGSTFGSIGYPGYASYCASKFALRGFSEALRRELADTGVRVLYLAPRAT 185

Query: 184 KTSM 187
           +T+M
Sbjct: 186 RTAM 189

Length = 263

>gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional

 Score = 85.8 bits (212), Expect = 9e-20
 Identities = 76/248 (30%), Positives = 115/248 (46%), Gaps = 15/248 (6%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDAR-----LHEWKNKGFKVTGSVCD 57
           ALVTGG  GIG A     AR GA V        E DA+     + E   K   + G   D
Sbjct: 52  ALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPG---D 108

Query: 58  LSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTV-DITAEDMSTVSSTNFESVFHL 116
           LS  +    L+        G L+I+   A      P + D+T+E      + N  ++F L
Sbjct: 109 LSDEKFARSLVHEAHKAL-GGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWL 167

Query: 117 SQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTN 176
           +Q A PL       SI+  SS+   +  P +  Y A K A+   ++ LA + A+  IR N
Sbjct: 168 TQEAIPLLPKGA--SIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVN 225

Query: 177 TVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG 236
            VAP  I T++      G +  + +    +QTP+ RAG+P E++ +  +L    +SY+T 
Sbjct: 226 IVAPGPIWTALQI---SGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTA 282

Query: 237 QIICVDGG 244
           ++  V GG
Sbjct: 283 EVHGVCGG 290

Length = 294

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 83.6 bits (207), Expect = 2e-19
 Identities = 59/202 (29%), Positives = 86/202 (42%), Gaps = 17/202 (8%)

Query: 2   TALVTGGTRGIGHATVEELARFGAI-VHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
           T LVTG  RGIG A VE L   GA  V+   R+        H     G KV     D++ 
Sbjct: 5   TVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDPGSAA---HLVAKYGDKVVPLRLDVTD 61

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVS---STNFESVFHLS 117
            E  +        +     +++INNA +   KP   +    +  +      N   +  L+
Sbjct: 62  PESIKAAAAQAKDV-----DVVINNAGVL--KPATLLEEGALEALKQEMDVNVFGLLRLA 114

Query: 118 QLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
           Q   P+ KA+G G+IV ++SV  ++  P++  Y A K A   LT+ L  E A       +
Sbjct: 115 QAFAPVLKANGGGAIVNLNSVASLKNFPAMGTYSASKSAAYSLTQGLRAELAAQGTLVLS 174

Query: 178 VAPWVIKTSM---IKPFEEGPE 196
           V P  I T M       +E PE
Sbjct: 175 VHPGPIDTRMAAGAGGPKESPE 196

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|180949 PRK07370, PRK07370, enoyl-(acyl carrier protein) reductase; Validated

 Score = 83.2 bits (206), Expect = 5e-19
 Identities = 66/210 (31%), Positives = 93/210 (44%), Gaps = 38/210 (18%)

Query: 56  CDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFE---- 111
           CD+    Q E+  ET+   + GKL+IL++   +AF     ++   D S  S   F     
Sbjct: 66  CDVQDDAQIEETFETIKQKW-GKLDILVH--CLAFAGKE-ELIG-DFSATSREGFARALE 120

Query: 112 -SVFHLSQLAH---PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACE 167
            S + L+ L     PL   S  GSIV ++ +GGVR IP+ ++ G  K A+    + LA E
Sbjct: 121 ISAYSLAPLCKAAKPLM--SEGGSIVTLTYLGGVRAIPNYNVMGVAKAALEASVRYLAAE 178

Query: 168 WAKDNIRTNTVAPWVIKT----------SMIKPFEEGPEGSEFLDGIARQTPIGRAGEPD 217
               NIR N ++   I+T           MI   EE             + P+ R     
Sbjct: 179 LGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEE-------------KAPLRRTVTQT 225

Query: 218 EVSSLVAFLCLPAASYITGQIICVDGGVTV 247
           EV +  AFL    AS ITGQ I VD G  +
Sbjct: 226 EVGNTAAFLLSDLASGITGQTIYVDAGYCI 255

Length = 258

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 81.2 bits (201), Expect = 2e-18
 Identities = 75/263 (28%), Positives = 114/263 (43%), Gaps = 29/263 (11%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKN--KGFKVTGSVCDLS 59
           T L+TG    IG A V+ +   G IV     ++  L+  L       K  K++    D++
Sbjct: 6   TILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDIT 65

Query: 60  SREQREKLIETVTSIFQGKLNILINNA---AIAFVKPTVDITAEDMSTVSSTNFESVFHL 116
            +E  E+ +      + GK++  +N A      + K   D++ +D +   S +  S F  
Sbjct: 66  DQESLEEFLSKSAEKY-GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLF 124

Query: 117 SQLAHPLFKASGNGSIVFISSVGGV--------RGIPSVSL--YGAYKGAMNQLTKNLAC 166
           SQ     FK  G G++V ISS+ GV         G    S   Y A K  +  LTK LA 
Sbjct: 125 SQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTSMTSPVEYAAIKAGIIHLTKYLAK 184

Query: 167 EWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAG--EPDEVSSLVA 224
            +   NIR N V+P  I        +  PE   FL+   +       G  +PD++   + 
Sbjct: 185 YFKDSNIRVNCVSPGGI-------LDNQPE--AFLNAYKKCC--NGKGMLDPDDICGTLV 233

Query: 225 FLCLPAASYITGQIICVDGGVTV 247
           FL    + YITGQ I VD G ++
Sbjct: 234 FLLSDQSKYITGQNIIVDDGFSL 256

Length = 256

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 83.5 bits (207), Expect = 3e-18
 Identities = 54/190 (28%), Positives = 83/190 (43%), Gaps = 5/190 (2%)

Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQ 63
           L+TG + GIG AT  ++A  GA V   +RN   LD  + E + KG       CDL+    
Sbjct: 375 LITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAA 434

Query: 64  REKLIETVTSIFQGKLNILINNAAIAFVKPTVDIT--AEDMSTVSSTNFESVFHLSQLAH 121
            +  ++ + +   G ++ L+NNA  +  +   + T    D     + N+     L     
Sbjct: 435 VDHTVKDILAEH-GHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLL 493

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIR-TNTVAP 180
           P  +    G +V +SS+G     P  S Y A K A++  +   A E   D I  T    P
Sbjct: 494 PHMRERRFGHVVNVSSIGVQTNAPRFSAYVASKAALDAFSDVAASETLSDGITFTTIHMP 553

Query: 181 WVIKTSMIKP 190
            V +T MI P
Sbjct: 554 LV-RTPMIAP 562

Length = 657

>gnl|CDD|131732 TIGR02685, pter_reduc_Leis, pteridine reductase

 Score = 81.1 bits (200), Expect = 3e-18
 Identities = 71/270 (26%), Positives = 111/270 (41%), Gaps = 32/270 (11%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVC--DLSS 60
           A+VTG  + IG +    L + G  V           + L    N     +   C  DLS+
Sbjct: 4   AVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSN 63

Query: 61  R----EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHL 116
                 + E +I+     F G+ ++L+NNA+  +  P +   A +      +    V  L
Sbjct: 64  SATLFSRCEAIIDACFRAF-GRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAEL 122

Query: 117 --SQLAHPLF---------------KASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159
             S    P F               + S N SIV +      + +   ++Y   K A+  
Sbjct: 123 FGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAMTDQPLLGFTMYTMAKHALEG 182

Query: 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIG-RAGEPDE 218
           LT++ A E A   IR N VAP +       PFE         +   R+ P+G R    ++
Sbjct: 183 LTRSAALELAPLQIRVNGVAPGLSLLPDAMPFEVQ-------EDYRRKVPLGQREASAEQ 235

Query: 219 VSSLVAFLCLPAASYITGQIICVDGGVTVT 248
           ++ +V FL  P A YITG  I VDGG+++T
Sbjct: 236 IADVVIFLVSPKAKYITGTCIKVDGGLSLT 265

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. Length = 267

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score = 80.8 bits (200), Expect = 4e-18
 Identities = 65/257 (25%), Positives = 104/257 (40%), Gaps = 19/257 (7%)

Query: 2   TALVTGGTRGIGHATVEELARFG---AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDL 58
            A+V GG + +G      LA  G   A+    S     +   ++    +G    G   D 
Sbjct: 4   VAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEG-MAYGFGADA 62

Query: 59  SSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVF---- 114
           +S +    L   V  IF G++++L+ NA IA      D    D       N    F    
Sbjct: 63  TSEQSVLALSRGVDEIF-GRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAR 121

Query: 115 HLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIR 174
             S+L   + +    G I+ I+S  G  G    S Y A K     LT++LA + A+  I 
Sbjct: 122 EFSRL---MIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEYGIT 178

Query: 175 TNTVAPW-VIKTSMIKPFEE------GPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLC 227
            +++    ++K+ M +          G +  E       + P+ R  +  +V +++ F  
Sbjct: 179 VHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLLFYA 238

Query: 228 LPAASYITGQIICVDGG 244
            P ASY TGQ I V GG
Sbjct: 239 SPKASYCTGQSINVTGG 255

Length = 259

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 78.4 bits (194), Expect = 3e-17
 Identities = 53/186 (28%), Positives = 86/186 (46%), Gaps = 9/186 (4%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            ALVTG + GIG AT E+LAR G  V   SRN                 V     D++  
Sbjct: 6   VALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPIPG--------VELLELDVTDD 57

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
              +  ++ V +   G++++L+NNA +       + +      +  TN   +  +++   
Sbjct: 58  ASVQAAVDEVIARA-GRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVL 116

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P  +A G+G I+ ISSV G    P ++LY A K A+   +++L  E  +  IR + V P 
Sbjct: 117 PHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPA 176

Query: 182 VIKTSM 187
             KT+ 
Sbjct: 177 YTKTNF 182

Length = 270

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 77.6 bits (191), Expect = 4e-17
 Identities = 60/239 (25%), Positives = 97/239 (40%), Gaps = 20/239 (8%)

Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDL----S 59
           LVTG + GIG       AR+GA V    RN+ +L         +G         L     
Sbjct: 8   LVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEG-GRQPQWFILDLLTC 66

Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQ 118
           + E  ++L + +   +  +L+ +++NA +   V P  +   +    V   N  + F L+Q
Sbjct: 67  TSENCQQLAQRIAVNY-PRLDGVLHNAGLLGDVCPLSEQNPQVWQDVXQVNVNATFMLTQ 125

Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
              PL   S  GS+VF SS  G +G  +   Y   K A   L + LA E+ + N+R N +
Sbjct: 126 ALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAVSKFATEGLXQVLADEYQQRNLRVNCI 185

Query: 179 APWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ 237
            P   +T+M          S F     ++        P ++  L  +L    +   TG 
Sbjct: 186 NPGGTRTAM--------RASAFPTEDPQKLK-----TPADIMPLYLWLMGDDSRRKTGM 231

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 77.1 bits (190), Expect = 1e-16
 Identities = 53/190 (27%), Positives = 88/190 (46%), Gaps = 4/190 (2%)

Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQ 63
           L+TG + GIG A  E+ AR GA V   +R +  LDA        G       CDLS  + 
Sbjct: 44  LLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDA 103

Query: 64  REKLIETVTSIFQGKLNILINNAAIAFVKPTVDITA--EDMSTVSSTNFESVFHLSQLAH 121
            + L+  V     G ++ILINNA  +  +P  +      D+      N+ +   L +   
Sbjct: 104 VDALVADVEKRI-GGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLA 162

Query: 122 PLFKASGNGSIVFISSVGGVRGI-PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
           P     G+G I+ +++ G +    P  S+Y A K A++ +++ +  EW    + + T+  
Sbjct: 163 PGMLERGDGHIINVATWGVLSEASPLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYY 222

Query: 181 WVIKTSMIKP 190
            ++ T MI P
Sbjct: 223 PLVATPMIAP 232

Length = 293

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 75.9 bits (187), Expect = 2e-16
 Identities = 50/168 (29%), Positives = 77/168 (45%), Gaps = 13/168 (7%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           T L+TGG  GIG A  +     G  V  C RN+     RL E K +  ++   VCD++ R
Sbjct: 7   TILITGGASGIGLALAKRFLELGNTVIICGRNE----ERLAEAKAENPEIHTEVCDVADR 62

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVS-----STNFESVFHL 116
           + R +L+E +   +   LN+LINNA I   +   D+T  +          +TN  +   L
Sbjct: 63  DSRRELVEWLKKEYP-NLNVLINNAGI---QRNEDLTGAEDLLDDAEQEIATNLLAPIRL 118

Query: 117 SQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNL 164
           + L  P        +I+ +SS      + S  +Y A K A++  T  L
Sbjct: 119 TALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCATKAAIHSYTLAL 166

Length = 245

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 76.1 bits (187), Expect = 2e-16
 Identities = 56/189 (29%), Positives = 94/189 (49%), Gaps = 6/189 (3%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           A++TGG  GIG AT  E AR GA V     ++  L   ++  + +GF V G +CD+  RE
Sbjct: 9   AVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHRE 68

Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
           +   L +    +  G ++++ +NA I    P V++T +D   V   +     H  +   P
Sbjct: 69  EVTHLADEAFRLL-GHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLP 127

Query: 123 -LFKASGNGSIVFISSVGGVRGIPSVSL--YGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
            L +    G +VF +S  G+  +P+  L  YG  K  +  L + LA E   D I  + + 
Sbjct: 128 RLLEQGTGGHVVFTASFAGL--VPNAGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLC 185

Query: 180 PWVIKTSMI 188
           P V++T+++
Sbjct: 186 PMVVETNLV 194

Length = 275

>gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional

 Score = 75.0 bits (185), Expect = 4e-16
 Identities = 73/267 (27%), Positives = 110/267 (41%), Gaps = 56/267 (20%)

Query: 1   MTALVTGGTRGIGHATVEELAR--FGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDL 58
             ALVTG  R IG A   +LA   F   VH  +R++ E +A   E +  G +      DL
Sbjct: 10  RAALVTGAARRIGRAIALDLAAHGFDVAVH-YNRSRDEAEALAAEIRALGRRAVALQADL 68

Query: 59  SSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTV-DITAEDMSTVSSTNFESVFHLS 117
           +   +   L+   ++   G + +L+NNA++ F   +    T        +TN  + F L+
Sbjct: 69  ADEAEVRALVARASAAL-GPITLLVNNASL-FEYDSAASFTRASWDRHMATNLRAPFVLA 126

Query: 118 QLAHPLFKASGNGSIV-------------FISSVGGVRGIPSVSLYGAYKGAMNQLTKNL 164
           Q       A   G +V             F+S             Y   K A+   T+ L
Sbjct: 127 QAFARALPADARGLVVNMIDQRVWNLNPDFLS-------------YTLSKAALWTATRTL 173

Query: 165 ACEWAKDNIRTNTVAPWVIKTSMIKPFEEGP---EGSEFLDGIARQ---TPIGRAGEPDE 218
           A   A   IR N + P             GP    G +  +  ARQ   TP+GR   P+E
Sbjct: 174 AQALAPR-IRVNAIGP-------------GPTLPSGRQSPEDFARQHAATPLGRGSTPEE 219

Query: 219 VSSLVAFL-CLPAASYITGQIICVDGG 244
           +++ V +L   P+   +TGQ+I VDGG
Sbjct: 220 IAAAVRYLLDAPS---VTGQMIAVDGG 243

Length = 258

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 73.9 bits (182), Expect = 2e-15
 Identities = 50/191 (26%), Positives = 84/191 (43%), Gaps = 7/191 (3%)

Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDA---RLHEWKNKGFKVTGSVCDLSS 60
           ++TG   G+G A     AR G  +     N+   +     L E    GF      CD+  
Sbjct: 4   MITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQR---CDVRD 60

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
             Q   L +     + G +++++NNA +A      +++ ED     + N   V    +  
Sbjct: 61  YSQLTALAQACEEKWGG-IDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAF 119

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
            PLFK   +G IV I+S+ G+   P++S Y   K  +  L++ L  E A D I  + V P
Sbjct: 120 LPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVALSETLLVELADDEIGVHVVCP 179

Query: 181 WVIKTSMIKPF 191
              +T+++  F
Sbjct: 180 SFFQTNLLDSF 190

Length = 270

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 74.5 bits (184), Expect = 3e-15
 Identities = 74/256 (28%), Positives = 114/256 (44%), Gaps = 37/256 (14%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELD-----ARLHEWKNKGFKVTGS-- 54
            ALVTG  RGIG A  E LAR GA V       + LD       L    N+   V G+  
Sbjct: 212 VALVTGAARGIGAAIAEVLARDGAHV-------VCLDVPAAGEALAAVANR---VGGTAL 261

Query: 55  VCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVF 114
             D+++ +   ++ E +     G L+I+++NA I   K   ++      +V + N  +  
Sbjct: 262 ALDITAPDAPARIAEHLAERH-GGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPL 320

Query: 115 HLSQ--LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDN 172
            +++  LA         G IV +SS+ G+ G    + Y A K  +  L + LA   A+  
Sbjct: 321 RITEALLAAGALGD--GGRIVGVSSISGIAGNRGQTNYAASKAGVIGLVQALAPLLAERG 378

Query: 173 IRTNTVAPWVIKTSMIK--PF---EEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLC 227
           I  N VAP  I+T M    PF   E G           R   + + G P +V+  +A+L 
Sbjct: 379 ITINAVAPGFIETQMTAAIPFATREAG----------RRMNSLQQGGLPVDVAETIAWLA 428

Query: 228 LPAASYITGQIICVDG 243
            PA+  +TG ++ V G
Sbjct: 429 SPASGGVTGNVVRVCG 444

Length = 450

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 73.1 bits (180), Expect = 3e-15
 Identities = 49/187 (26%), Positives = 83/187 (44%), Gaps = 14/187 (7%)

Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQ 63
            +TG +RG G A  E     G  V   +R+   L     ++ ++   +   V D   R  
Sbjct: 7   FITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTD---RAA 63

Query: 64  REKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPL 123
               +ET    F G+L+I++NNA         ++T  +      TNF     ++Q   P 
Sbjct: 64  VFAAVETAVEHF-GRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPY 122

Query: 124 FKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVI 183
            +   +G I+ ISS+GG+   P   +Y A K A+  +++ LA E          VA + I
Sbjct: 123 LREQRSGHIIQISSIGGISAFPMSGIYHASKWALEGMSEALAQE----------VAEFGI 172

Query: 184 KTSMIKP 190
           K ++++P
Sbjct: 173 KVTLVEP 179

Length = 275

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 72.3 bits (177), Expect = 4e-15
 Identities = 53/203 (26%), Positives = 88/203 (43%), Gaps = 5/203 (2%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSV-CDL-- 58
           T LVTG ++G+G    +  A  GA V   +R+Q +L+         G     ++  DL  
Sbjct: 8   TILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMS 67

Query: 59  SSREQREKLIETVTSIFQGKLNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLS 117
           +  ++ E+   T+    QGKL+ +++ A   + + P    T  +       N  +   L+
Sbjct: 68  AEEKEFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLT 127

Query: 118 QLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAK-DNIRTN 176
           +   PL K S + S++F+    G         +GA K A+N L K  A EW +  N+R N
Sbjct: 128 RALFPLLKQSPDASVIFVGESHGETPKAYWGGFGASKAALNYLCKVAADEWERFGNLRAN 187

Query: 177 TVAPWVIKTSMIKPFEEGPEGSE 199
            + P  I +        G   SE
Sbjct: 188 VLVPGPINSPQRIKSHPGEAKSE 210

Length = 239

>gnl|CDD|237099 PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 72.0 bits (177), Expect = 5e-15
 Identities = 55/226 (24%), Positives = 85/226 (37%), Gaps = 45/226 (19%)

Query: 57  DLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHL 116
           DL      +  +  +     G+++ L N   IA V  T  +       V+  NF  + HL
Sbjct: 31  DLGDPASIDAAVAALP----GRIDALFN---IAGVPGTAPVEL-----VARVNFLGLRHL 78

Query: 117 SQLAHPLFKASGNGSIVFISSVGGV---------------------------RGIPSVSL 149
           ++   P     G  +IV ++S+ G                              +   + 
Sbjct: 79  TEALLPRMAPGG--AIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATG 136

Query: 150 YGAYKGAMNQLTKNLACEWAKD-NIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQT 208
           Y   K A+   T   A  W     IR N VAP  + T ++  F     G E +D  A   
Sbjct: 137 YQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSM-LGQERVDSDA--K 193

Query: 209 PIGRAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVTVNVNGL 254
            +GR    DE ++++ FLC  AA +I G  + VDGG+  T     L
Sbjct: 194 RMGRPATADEQAAVLVFLCSDAARWINGVNLPVDGGLAATYIAAVL 239

Length = 241

>gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated

 Score = 71.8 bits (176), Expect = 7e-15
 Identities = 79/258 (30%), Positives = 114/258 (44%), Gaps = 36/258 (13%)

Query: 3   ALVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHEWKNKGFKVTGSV------ 55
           ALVTG  RGIG      L   G  +V        +LD      + +G KV  ++      
Sbjct: 13  ALVTGAARGIGLGIAAWLIAEGWQVVLA------DLD------RERGSKVAKALGENAWF 60

Query: 56  --CDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMS-----TVSST 108
              D++   Q    +  V   F G+L+ L+ NAAIA   P  + T E +S      V + 
Sbjct: 61  IAMDVADEAQVAAGVAEVLGQF-GRLDALVCNAAIA--DPH-NTTLESLSLAHWNRVLAV 116

Query: 109 NFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEW 168
           N      L++   P  +A  NG+IV ++S    +  P    Y A KG +  LT  LA   
Sbjct: 117 NLTGPMLLAKHCAPYLRAH-NGAIVNLASTRARQSEPDTEAYAASKGGLLALTHALAISL 175

Query: 169 AKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCL 228
             + IR N V+P  I      P +   E     D    Q P GR G  ++V+++VA+L  
Sbjct: 176 GPE-IRVNAVSPGWIDAR--DPSQRRAEPLSEAD--HAQHPAGRVGTVEDVAAMVAWLLS 230

Query: 229 PAASYITGQIICVDGGVT 246
             A ++TGQ   VDGG+T
Sbjct: 231 RQAGFVTGQEFVVDGGMT 248

Length = 255

>gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 70.9 bits (174), Expect = 1e-14
 Identities = 54/244 (22%), Positives = 102/244 (41%), Gaps = 17/244 (6%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
              + G + G+G+A      + GA V   SRN+ +L  R+ +  +K   +   V D+SS 
Sbjct: 7   KVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKL-KRMKKTLSKYGNIHYVVGDVSST 65

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           E    +IE    +      +++      +V+ TV+  +  +  + + + +   +    + 
Sbjct: 66  ESARNVIEKAAKVLNAIDGLVV--TVGGYVEDTVEEFSG-LEEMLTNHIKIPLYAVNASL 122

Query: 122 PLFKASGNGSIVFISSVGGV-RGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
              K     SIV +SS+ G+ +  P    Y   K  + +  + LA E     IR N +AP
Sbjct: 123 RFLKEGS--SIVLVSSMSGIYKASPDQLSYAVAKAGLAKAVEILASELLGRGIRVNGIAP 180

Query: 181 WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
               T++   FE      +         P      P++ + ++ +L    A ++ G +I 
Sbjct: 181 ----TTISGDFEPERNWKKLRKLGDDMAP------PEDFAKVIIWLLTDEADWVDGVVIP 230

Query: 241 VDGG 244
           VDGG
Sbjct: 231 VDGG 234

Length = 238

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 71.0 bits (174), Expect = 1e-14
 Identities = 48/221 (21%), Positives = 87/221 (39%), Gaps = 44/221 (19%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             L+TG + GIG                     + L  RL    +K FKV  ++ DL  +
Sbjct: 2   VVLITGCSSGIG---------------------LHLAVRLASDPSKRFKVYATMRDLKKK 40

Query: 62  EQ-----REKLIETVT-----------------SIFQGKLNILINNAAIAFVKPTVDITA 99
            +           T+                   + +  +++L+ NA +  + P   ++ 
Sbjct: 41  GRLWEAAGALAGGTLETLQLDVCDSKSVAAAVERVTERHVDVLVCNAGVGLLGPLEALSE 100

Query: 100 EDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159
           + M++V   N      + Q   P  K  G+G I+  SSVGG++G+P   +Y A K A+  
Sbjct: 101 DAMASVFDVNVFGTVRMLQAFLPDMKRRGSGRILVTSSVGGLQGLPFNDVYCASKFALEG 160

Query: 160 LTKNLACEWAKDNIRTNTVAPWVIKTS-MIKPFEEGPEGSE 199
           L ++LA +    N+  + +    + T+ M K      E  +
Sbjct: 161 LCESLAVQLLPFNVHLSLIECGPVHTAFMEKVLGSPEEVLD 201

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 71.0 bits (174), Expect = 2e-14
 Identities = 51/185 (27%), Positives = 77/185 (41%), Gaps = 8/185 (4%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             L+TG + GIG A  +     G  V   +R        +      GF  T    D++  
Sbjct: 3   VVLITGCSSGIGRALADAFKAAGYEVWATARK----AEDVEALAAAGF--TAVQLDVNDG 56

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
               +L E + +   G L++LINNA    + P +D   E M     TN  +V  +++   
Sbjct: 57  AALARLAEELEAEHGG-LDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALF 115

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           PL +    G +V I SV GV   P    Y A K A++ L+  L  E A   ++   V P 
Sbjct: 116 PLLR-RSRGLVVNIGSVSGVLVTPFAGAYCASKAAVHALSDALRLELAPFGVQVMEVQPG 174

Query: 182 VIKTS 186
            I + 
Sbjct: 175 AIASQ 179

Length = 274

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score = 70.6 bits (173), Expect = 2e-14
 Identities = 67/254 (26%), Positives = 107/254 (42%), Gaps = 16/254 (6%)

Query: 3   ALVTGGTRGIGHATVEELARFG---AIVHTCSRN-QIELDARLHEWKNKGFKVTGSVCDL 58
           A+V GG + +G      LA  G   A+    S N +   D    E+   G K  G   D 
Sbjct: 5   AVVIGGGQTLGEFLCHGLAEAGYDVAVADINSENAEKVADEINAEY---GEKAYGFGADA 61

Query: 59  SSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQ 118
           ++ +    L + V  IF  ++++L+ +A IA      D    D       N    F  ++
Sbjct: 62  TNEQSVIALSKGVDEIF-KRVDLLVYSAGIAKSAKITDFELGDFDRSLQVNLVGYFLCAR 120

Query: 119 LAHPLFKASGN-GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
               L    G  G I+ I+S  G  G    S Y A K     LT++LA + A+  I  N+
Sbjct: 121 EFSKLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEHGITVNS 180

Query: 178 VAPW-VIKTSMIKPF------EEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPA 230
           +    ++K+ M +        + G + SE       + P+ R  +  +V +++ F   P 
Sbjct: 181 LMLGNLLKSPMFQSLLPQYAKKLGIKESEVEQYYIDKVPLKRGCDYQDVLNMLLFYASPK 240

Query: 231 ASYITGQIICVDGG 244
           ASY TGQ I + GG
Sbjct: 241 ASYCTGQSINITGG 254

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR)

 Score = 69.1 bits (169), Expect = 2e-14
 Identities = 52/228 (22%), Positives = 79/228 (34%), Gaps = 50/228 (21%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
            LVTGG+ GIG A    LA  G+                        KV           
Sbjct: 1   VLVTGGSGGIGGAIARWLASRGS-----------------------PKVL---------- 27

Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
                   V S    + +++++NAAI      +D+T   +      N      L + A  
Sbjct: 28  --------VVS----RRDVVVHNAAILDDGRLIDLTGSRIERAIRANVVGTRRLLEAARE 75

Query: 123 LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWV 182
           L KA   G  + ISSV G+ G P +  Y A K A++ L +  A E   + +    VA   
Sbjct: 76  LMKAKRLGRFILISSVAGLFGAPGLGGYAASKAALDGLAQQWASEGWGNGLPATAVACGT 135

Query: 183 IKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPA 230
              S +      PE     + +  +    R   P+EV+  +       
Sbjct: 136 WAGSGMAKGPVAPE-----EILGNRRHGVRTMPPEEVARALLNALDRP 178

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 69.6 bits (171), Expect = 3e-14
 Identities = 56/187 (29%), Positives = 83/187 (44%), Gaps = 12/187 (6%)

Query: 1   MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
            TAL+TG +RGIG A   ELA     +    R    LD    E        T    DL+ 
Sbjct: 4   PTALITGASRGIGAAIARELAP-THTLLLGGRPAERLDELAAELPG----ATPFPVDLT- 57

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
               E +   V  +  G+L++L++NA +A + P  + T ++       N  +   L++L 
Sbjct: 58  --DPEAIAAAVEQL--GRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLL 113

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
            P  +A+  G +VFI+S  G+R  P    Y A K A+  L   L  E    N+R  +V P
Sbjct: 114 LPALRAAH-GHVVFINSGAGLRANPGWGSYAASKFALRALADALREEEP-GNVRVTSVHP 171

Query: 181 WVIKTSM 187
               T M
Sbjct: 172 GRTDTDM 178

Length = 227

>gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional

 Score = 70.1 bits (172), Expect = 3e-14
 Identities = 57/184 (30%), Positives = 80/184 (43%), Gaps = 6/184 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           + L+TG + GIG     EL R G  V    R   ++ AR++     GF  TG + DL   
Sbjct: 4   SVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDV-ARMNS---LGF--TGILLDLDDP 57

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           E  E+  + V ++   +L  L NNA      P   I+ + M    STNF     L+ L  
Sbjct: 58  ESVERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLL 117

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P     G G IV  SSV G+   P    Y A K A+   +  L  E     I+ + + P 
Sbjct: 118 PAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPG 177

Query: 182 VIKT 185
            I+T
Sbjct: 178 PIRT 181

Length = 256

>gnl|CDD|180766 PRK06940, PRK06940, short chain dehydrogenase; Provisional

 Score = 69.3 bits (170), Expect = 6e-14
 Identities = 73/281 (25%), Positives = 113/281 (40%), Gaps = 53/281 (18%)

Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQ 63
           +V  G  GIG A    +   G  V     N+  L+A     +  GF V+    D+SSRE 
Sbjct: 5   VVVIGAGGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRES 63

Query: 64  REKLIETVTSIFQGKLNILINNAAIAFVK-PTVDITAEDM--STVSSTNFESVFHLSQLA 120
            + L  T  ++  G +  L++ A ++  +     I   D+  + +    F  V       
Sbjct: 64  VKALAATAQTL--GPVTGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVI------ 115

Query: 121 HPLFKASGNGSIVFISSVGG-----------------------------VRGIPSVSLYG 151
                A G G+ V I+S  G                                I   SL+ 
Sbjct: 116 -----APG-GAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQPDAIED-SLH- 167

Query: 152 AYKGA--MNQL-TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQT 208
           AY+ A   N L     A +W +   R N+++P +I T + +    GP G +    +  ++
Sbjct: 168 AYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRG-DGYRNMFAKS 226

Query: 209 PIGRAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVTV 249
           P GR G PDE+++L  FL  P  S+ITG    VDGG T + 
Sbjct: 227 PAGRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGGATASY 267

Length = 275

>gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs

 Score = 68.0 bits (167), Expect = 8e-14
 Identities = 44/196 (22%), Positives = 72/196 (36%), Gaps = 27/196 (13%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
            +V G T  IG A  + L+  G  V T  R+  +                    D++   
Sbjct: 1   IIVIGATGTIGLAVAQLLSAHGHEVITAGRSSGDY-----------------QVDITDEA 43

Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
             + L E V     G  + +++ A  A   P  ++T  D     ++      +L +   P
Sbjct: 44  SIKALFEKV-----GHFDAIVSTAGDAEFAPLAELTDADFQRGLNSKLLGQINLVRHGLP 98

Query: 123 LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWV 182
               +  GSI   S +   R IP  +      GA+    +  A E  +  IR N V+P V
Sbjct: 99  Y--LNDGGSITLTSGILAQRPIPGGAAAATVNGALEGFVRAAAIELPRG-IRINAVSPGV 155

Query: 183 IKTSMIK--PFEEGPE 196
           ++ S+     F  G E
Sbjct: 156 VEESLEAYGDFFPGFE 171

Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 68.4 bits (168), Expect = 9e-14
 Identities = 57/191 (29%), Positives = 88/191 (46%), Gaps = 11/191 (5%)

Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSV-CDLS--S 60
           LVTG   GIG       AR GA V    R + +L+A   E +  G      +  DL   +
Sbjct: 16  LVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTAT 75

Query: 61  REQREKLIETVTSIFQGKLNILINNAAI-AFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
            +  ++L +T+   F G+L+ +++NA +   + P      E    V   N  + F L+Q 
Sbjct: 76  PQNYQQLADTIEEQF-GRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQA 134

Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAY---KGAMNQLTKNLACEWAKDNIRTN 176
             PL   S   S+VF SS  G +G    + +GAY   K A   + + LA E+   N+R N
Sbjct: 135 LLPLLLKSPAASLVFTSSSVGRQG---RANWGAYAVSKFATEGMMQVLADEYQGTNLRVN 191

Query: 177 TVAPWVIKTSM 187
            + P   +T+M
Sbjct: 192 CINPGGTRTAM 202

Length = 247

>gnl|CDD|132368 TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

 Score = 68.3 bits (167), Expect = 1e-13
 Identities = 76/264 (28%), Positives = 111/264 (42%), Gaps = 33/264 (12%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEW-KNKGFKVTGSVCDLSSR 61
            LVTGG  G+G A V+     GA V    ++     A L E     G  V G   D+ S 
Sbjct: 8   VLVTGGASGLGRAIVDRFVAEGARVAVLDKSA----AGLQELEAAHGDAVVGVEGDVRSL 63

Query: 62  EQREKLIETVTSIFQGKLNILINNAAI-AFVKPTVDITAEDMSTVSSTNFESVFHLS--- 117
           +  ++ +    + F GK++ LI NA I  +    VDI  + +       F+ VFH++   
Sbjct: 64  DDHKEAVARCVAAF-GKIDCLIPNAGIWDYSTALVDIPDDRIDEA----FDEVFHINVKG 118

Query: 118 -----QLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDN 172
                + A P   AS  GS++F  S  G        LY A K A+  L K LA E A   
Sbjct: 119 YLLAVKAALPALVAS-RGSVIFTISNAGFYPNGGGPLYTAAKHAVVGLVKELAFELAP-Y 176

Query: 173 IRTNTVAPWVIKTSMIKPFEEGPEG--------SEFLDGIARQTPIGRAGEPDEVS-SLV 223
           +R N VAP  + + +  P   G            + L  +    PIGR  + +E + + V
Sbjct: 177 VRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSV---LPIGRMPDAEEYTGAYV 233

Query: 224 AFLCLPAASYITGQIICVDGGVTV 247
            F         TG ++  DGG+ V
Sbjct: 234 FFATRGDTVPATGAVLNYDGGMGV 257

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Length = 262

>gnl|CDD|235694 PRK06079, PRK06079, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 67.8 bits (166), Expect = 2e-13
 Identities = 53/199 (26%), Positives = 93/199 (46%), Gaps = 20/199 (10%)

Query: 56  CDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPT------VDITAEDMSTVSSTN 109
           CD++S E  E+   T+     GK++ +++  AIA+ K         D + +  +     +
Sbjct: 62  CDVASDESIERAFATIKERV-GKIDGIVH--AIAYAKKEELGGNVTDTSRDGYALAQDIS 118

Query: 110 FESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA 169
             S+  +++ A PL       SIV ++  G  R IP+ ++ G  K A+    + LA +  
Sbjct: 119 AYSLIAVAKYARPLLNP--GASIVTLTYFGSERAIPNYNVMGIAKAALESSVRYLARDLG 176

Query: 170 KDNIRTNTVAPWVIKT---SMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFL 226
           K  IR N ++   +KT   + IK  ++  + S+       +T  G     +EV +  AFL
Sbjct: 177 KKGIRVNAISAGAVKTLAVTGIKGHKDLLKESD------SRTVDGVGVTIEEVGNTAAFL 230

Query: 227 CLPAASYITGQIICVDGGV 245
               ++ +TG II VD GV
Sbjct: 231 LSDLSTGVTGDIIYVDKGV 249

Length = 252

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 66.9 bits (164), Expect = 5e-13
 Identities = 53/189 (28%), Positives = 81/189 (42%), Gaps = 15/189 (7%)

Query: 5   VTGGTRGIGHATVEELARFGAIVHTCSRNQI-ELDARLHEWKNKGFK-VTGSVCDLSSRE 62
           +TGG RGIG AT   LA  GA V       I +LD  L +        V G   D++   
Sbjct: 10  ITGGARGIGLATARALAALGARV------AIGDLDEALAKETAAELGLVVGGPLDVTDPA 63

Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSST---NFESVFHLSQL 119
                ++ V +   G +++L+NNA +  V P +D   E  +        N   V   S+L
Sbjct: 64  SFAAFLDAVEADL-GPIDVLVNNAGVMPVGPFLD---EPDAVTRRILDVNVYGVILGSKL 119

Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
           A P     G G +V ++S+ G   +P ++ Y A K A+   T     E     +  + V 
Sbjct: 120 AAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHAVVGFTDAARLELRGTGVHVSVVL 179

Query: 180 PWVIKTSMI 188
           P  + T +I
Sbjct: 180 PSFVNTELI 188

Length = 273

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 66.6 bits (163), Expect = 6e-13
 Identities = 54/243 (22%), Positives = 99/243 (40%), Gaps = 30/243 (12%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRN---QIELDARLHEWKNKGFKVTGSV--- 55
            A+VTG + G G  T  ELA+ G +V    RN   Q  L ++  +       +  ++   
Sbjct: 5   IAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQ-----LNLQQNIKVQ 59

Query: 56  -CDLSSREQREKLIETVTSIFQ--GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFES 112
             D++ +      I     + +  G++++L+NNA  A      +I  E+      TN   
Sbjct: 60  QLDVTDQNS----IHNFQLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFG 115

Query: 113 VFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDN 172
              ++Q   P  +   +G I+ ISS+ G  G P +S Y + K A+   +++L  E     
Sbjct: 116 AISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKYALEGFSESLRLELKPFG 175

Query: 173 IRTNTVAPWVIKTS---------MIKPFEEGPEGSEFLDGIAR--QTPIGRAGEPDEVSS 221
           I    + P    T+           +     P   E++  I +   +     G P +V++
Sbjct: 176 IDVALIEPGSYNTNIWEVGKQLAENQSETTSPY-KEYMKKIQKHINSGSDTFGNPIDVAN 234

Query: 222 LVA 224
           L+ 
Sbjct: 235 LIV 237

Length = 280

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 65.9 bits (161), Expect = 9e-13
 Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 9/192 (4%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
            ++TG ++G+G A   +L   G  V + SR + +   +L E  N     T    DL    
Sbjct: 4   VIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNL--TFHSLDLQDVH 61

Query: 63  QREKLIETV-TSIFQGKLN--ILINNAAI-AFVKPTVDITAEDMSTVSSTNFESVFHLSQ 118
           + E     + +SI +  ++   LINNA + A +KP     +E++ T    N  +   L+ 
Sbjct: 62  ELETNFNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTS 121

Query: 119 LAHPLFKA-SGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
                 K    +  ++ ISS          S Y + K  ++  T+ +A E  ++      
Sbjct: 122 TFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKI 181

Query: 178 VA--PWVIKTSM 187
           VA  P V+ T+M
Sbjct: 182 VAFSPGVMDTNM 193

Length = 251

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 65.3 bits (160), Expect = 1e-12
 Identities = 54/188 (28%), Positives = 78/188 (41%), Gaps = 14/188 (7%)

Query: 2   TALVTGGTRGIGHATVEE-LARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
             LVTG  RGIG A VE+ LAR  A V+  +R+   +            +V     D++ 
Sbjct: 8   VVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTDLGP-------RVVPLQLDVTD 60

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAED-MSTVSSTNFESVFHLSQL 119
                   E  + +      IL+NNA I      +    ED +     TN+     +++ 
Sbjct: 61  PASVAAAAEAASDV-----TILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARA 115

Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
             P+  A+G G+IV + SV      P++  Y A K A   LT+ L  E A    R   V 
Sbjct: 116 FAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASKAAAWSLTQALRAELAPQGTRVLGVH 175

Query: 180 PWVIKTSM 187
           P  I T M
Sbjct: 176 PGPIDTDM 183

Length = 238

>gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional

 Score = 64.4 bits (157), Expect = 3e-12
 Identities = 64/253 (25%), Positives = 108/253 (42%), Gaps = 15/253 (5%)

Query: 2   TALVTGGTRGIGHATVEELARFGA---IVHTCS-RNQIELDARLHEWKNKGFKVTGSVCD 57
             L+ GG + +G     +LA  GA    +H  S  ++ + +  +   K  G K      D
Sbjct: 10  VVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQAD 69

Query: 58  LSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLS 117
           L++    EKL +   + F G+ +I IN       KP V+I+  +   + + N +S F   
Sbjct: 70  LTTAAAVEKLFDDAKAAF-GRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFI 128

Query: 118 QLAHPLFKASGNGSIVFI--SSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
           + A      + NG IV +  S +G     P  S Y   K  +   T+  + E+    I  
Sbjct: 129 KEAGR--HLNDNGKIVTLVTSLLGAF--TPFYSAYAGSKAPVEHFTRAASKEFGARGISV 184

Query: 176 NTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAG--EPDEVSSLVAFLCLPAASY 233
             V P  + T    P +EG E   +    A  +P  + G  + +++   + FL +    +
Sbjct: 185 TAVGPGPMDTPFFYP-QEGAEAVAYHKTAAALSPFSKTGLTDIEDIVPFIRFL-VTDGWW 242

Query: 234 ITGQIICVDGGVT 246
           ITGQ I ++GG T
Sbjct: 243 ITGQTILINGGYT 255

Length = 257

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 64.2 bits (157), Expect = 4e-12
 Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 7/184 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            ALVTG + GIG AT   LA  G  V+  +R +++   ++ +  + G        D++  
Sbjct: 5   VALVTGASSGIGKATARRLAAQGYTVYGAAR-RVD---KMEDLASLGVHPLS--LDVTDE 58

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
              +  ++T+ +  +G++++L+NNA         D+  ++       N      L+QL  
Sbjct: 59  ASIKAAVDTIIAE-EGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVL 117

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P  +A  +G I+ ISS+GG    P  + Y A K A+   +  L  E A   I    + P 
Sbjct: 118 PHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPG 177

Query: 182 VIKT 185
            IKT
Sbjct: 178 GIKT 181

Length = 273

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 62.0 bits (151), Expect = 2e-11
 Identities = 48/192 (25%), Positives = 82/192 (42%), Gaps = 5/192 (2%)

Query: 1   MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVC-DLS 59
               VTG   GIG AT   LA  GA +    R+   L   + + +  G  V      D+S
Sbjct: 1   KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDIS 60

Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD-ITAEDMSTVSSTNFESVFHLSQ 118
             +        + +   G +++++N A I+    TVD +T E    +   N     H+ +
Sbjct: 61  DYDAVAAFAADIHAAH-GSMDVVMNIAGIS-AWGTVDRLTHEQWRRMVDVNLMGPIHVIE 118

Query: 119 -LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
               P+  A   G +V +SS  G+  +P  + Y A K  +  L++ L  + A+  I  + 
Sbjct: 119 TFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLRGLSEVLRFDLARHGIGVSV 178

Query: 178 VAPWVIKTSMIK 189
           V P  +KT ++ 
Sbjct: 179 VVPGAVKTPLVN 190

Length = 272

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score = 62.0 bits (151), Expect = 2e-11
 Identities = 66/265 (24%), Positives = 106/265 (40%), Gaps = 38/265 (14%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQI--ELDARLH----------EWKNKGF 49
             +VTG   GIG A     A  GA V     N I   LD              E    G 
Sbjct: 8   VVIVTGAGGGIGRAHALAFAAEGARVVV---NDIGVGLDGSASGGSAAQAVVDEIVAAGG 64

Query: 50  KVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTN 109
           +   +  D++  +    L++     F G L++L+NNA I   +   +++ E+   V + +
Sbjct: 65  EAVANGDDIADWDGAANLVDAAVETF-GGLDVLVNNAGILRDRMIANMSEEEWDAVIAVH 123

Query: 110 FESVFHLSQLAHPLFKASG------NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKN 163
            +  F   + A   ++A        +  I+  SS  G++G      Y A K  +  LT  
Sbjct: 124 LKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSVGQGNYSAAKAGIAALTLV 183

Query: 164 LACEWAKDNIRTNTVAPWVIKTSMIKP----FEEGPEGSEFLDGIARQTPIGRAGEPDEV 219
            A E  +  +  N +AP   +T M +         PE  EF D +A          P+ V
Sbjct: 184 AAAELGRYGVTVNAIAP-AARTRMTETVFAEMMAKPEEGEF-DAMA----------PENV 231

Query: 220 SSLVAFLCLPAASYITGQIICVDGG 244
           S LV +L    +  +TG++  V+GG
Sbjct: 232 SPLVVWLGSAESRDVTGKVFEVEGG 256

Length = 286

>gnl|CDD|181416 PRK08415, PRK08415, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 61.3 bits (149), Expect = 4e-11
 Identities = 47/196 (23%), Positives = 87/196 (44%), Gaps = 16/196 (8%)

Query: 56  CDLSSREQREKLIETVTSIFQGKLNILINNAAIA----FVKPTVDITAEDMSTVSSTNFE 111
            D+S  E  + L E++     GK++ ++++ A A         ++ + E  +     +  
Sbjct: 62  LDVSKPEHFKSLAESLKKDL-GKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVY 120

Query: 112 SVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKD 171
           S+  L++   PL   +   S++ +S +GGV+ +P  ++ G  K A+    + LA +  K 
Sbjct: 121 SLIELTRALLPLL--NDGASVLTLSYLGGVKYVPHYNVMGVAKAALESSVRYLAVDLGKK 178

Query: 172 NIRTNTVAPWVIKT---SMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCL 228
            IR N ++   IKT   S I  F         L       P+ +    +EV +   +L  
Sbjct: 179 GIRVNAISAGPIKTLAASGIGDF------RMILKWNEINAPLKKNVSIEEVGNSGMYLLS 232

Query: 229 PAASYITGQIICVDGG 244
             +S +TG+I  VD G
Sbjct: 233 DLSSGVTGEIHYVDAG 248

Length = 274

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 61.7 bits (150), Expect = 5e-11
 Identities = 51/182 (28%), Positives = 82/182 (45%), Gaps = 2/182 (1%)

Query: 5   VTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQR 64
           +TG + GIG AT E  AR GA +   +R++  L A   E +  G +V     D++  +Q 
Sbjct: 12  ITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQV 71

Query: 65  EKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLF 124
           + L     S F G++++ +NN  +  V    +   E    V  TN       +  A P+F
Sbjct: 72  KALATQAAS-FGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIF 130

Query: 125 KASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKD-NIRTNTVAPWVI 183
           K  G+G  + + S+GG    P  + Y A K  +   ++ L  E A   +I    V P  +
Sbjct: 131 KKQGHGIFINMISLGGFAAQPYAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFM 190

Query: 184 KT 185
            T
Sbjct: 191 DT 192

Length = 330

>gnl|CDD|169553 PRK08690, PRK08690, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 61.1 bits (148), Expect = 5e-11
 Identities = 56/202 (27%), Positives = 99/202 (49%), Gaps = 20/202 (9%)

Query: 56  CDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFH 115
           CD++S ++  ++   +   + G L+ L++  +I F  P   ++ + + ++S   F +   
Sbjct: 63  CDVASDDEINQVFADLGKHWDG-LDGLVH--SIGFA-PKEALSGDFLDSISREAFNTAHE 118

Query: 116 LSQLAHP-LFKASG------NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEW 168
           +S  + P L KA+       N +IV +S +G VR IP+ ++ G  K ++    +  A   
Sbjct: 119 ISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIPNYNVMGMAKASLEAGIRFTAACL 178

Query: 169 AKDNIRTNTVAPWVIKT---SMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAF 225
            K+ IR N ++   IKT   S I  F       + L  +A   P+ R    +EV +  AF
Sbjct: 179 GKEGIRCNGISAGPIKTLAASGIADF------GKLLGHVAAHNPLRRNVTIEEVGNTAAF 232

Query: 226 LCLPAASYITGQIICVDGGVTV 247
           L    +S ITG+I  VDGG ++
Sbjct: 233 LLSDLSSGITGEITYVDGGYSI 254

Length = 261

>gnl|CDD|180789 PRK06997, PRK06997, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 60.6 bits (147), Expect = 7e-11
 Identities = 59/203 (29%), Positives = 95/203 (46%), Gaps = 19/203 (9%)

Query: 56  CDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFH 115
           CD++S EQ + L  ++   + G L+ L++  +I F  P   I  + +  +S  NF     
Sbjct: 63  CDVASDEQIDALFASLGQHWDG-LDGLVH--SIGFA-PREAIAGDFLDGLSRENFRIAHD 118

Query: 116 LSQLAHP-LFKA-----SGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA 169
           +S  + P L KA     S + S++ +S +G  R +P+ +  G  K ++    + LA    
Sbjct: 119 ISAYSFPALAKAALPMLSDDASLLTLSYLGAERVVPNYNTMGLAKASLEASVRYLAVSLG 178

Query: 170 KDNIRTNTVAPWVIKT---SMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFL 226
              IR N ++   IKT   S IK F       + LD +    P+ R    +EV ++ AFL
Sbjct: 179 PKGIRANGISAGPIKTLAASGIKDF------GKILDFVESNAPLRRNVTIEEVGNVAAFL 232

Query: 227 CLPAASYITGQIICVDGGVTVTV 249
               AS +TG+I  VD G    V
Sbjct: 233 LSDLASGVTGEITHVDSGFNAVV 255

Length = 260

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 59.6 bits (145), Expect = 2e-10
 Identities = 46/169 (27%), Positives = 71/169 (42%), Gaps = 7/169 (4%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            A++TG   G G A     A  G  +      Q  LD  + E + +G +V G   D+S  
Sbjct: 8   VAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDA 67

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
            Q E L +     F G +++L NNA +       + +  D   V   N   V H  +   
Sbjct: 68  AQVEALADAALERF-GAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFT 126

Query: 122 PLFKASG------NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNL 164
           PL  A+        G IV  +S+ G+   P++ +Y   K A+  LT+ L
Sbjct: 127 PLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIYNVSKHAVVSLTETL 175

Length = 287

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 57.9 bits (141), Expect = 2e-10
 Identities = 44/160 (27%), Positives = 69/160 (43%), Gaps = 19/160 (11%)

Query: 2   TALVTGGTRGIGHATVEELARFGA--IVHTCSRNQI---ELDARLHEWKNKGFKVTGSVC 56
           T L+TGG  G+G A    LA  GA  +V   SR+        A L E +  G +VT   C
Sbjct: 2   TYLITGGLGGLGRALARWLAERGARRLVLL-SRSGPDAPGAAALLAELEAAGARVTVVAC 60

Query: 57  DLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHL 116
           D++ R+    ++  + ++  G L  +I+ A +        +T E  + V +      ++L
Sbjct: 61  DVADRDALAAVLAAIPAVE-GPLTGVIHAAGVLDDGVLASLTPERFAAVLAPKAAGAWNL 119

Query: 117 SQLAHPL----FKASGNGSIVFISSVGGVRGIPSVSLYGA 152
            +L   L    F        V  SS+ GV G P  + Y A
Sbjct: 120 HELTADLPLDFF--------VLFSSIAGVLGSPGQANYAA 151

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|187595 cd05334, DHPR_SDR_c_like, dihydropteridine reductase (DHPR), classical (c) SDRs

 Score = 58.5 bits (142), Expect = 2e-10
 Identities = 57/243 (23%), Positives = 96/243 (39%), Gaps = 29/243 (11%)

Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQ 63
           LV GG   +G A V+     G  V   S +  E     +E  +    V  S    S  EQ
Sbjct: 5   LVYGGRGALGSAVVQAFKSRGWWV--ASIDLAE-----NEEADASIIVLDSD---SFTEQ 54

Query: 64  REKLIETVTSIFQGKLNILINNAA-IAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
            ++++ +V  +  GK++ LI  A   A          ++   +   N  + F  S LA  
Sbjct: 55  AKQVVASVARLS-GKVDALICVAGGWAGGSAKSKSFVKNWDLMWKQNLWTSFIASHLATK 113

Query: 123 LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEW--AKDNIRTNTVAP 180
                  G +V   +   +   P +  YGA K A++QLT++LA E          N + P
Sbjct: 114 HLL--SGGLLVLTGAKAALEPTPGMIGYGAAKAAVHQLTQSLAAENSGLPAGSTANAILP 171

Query: 181 WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
             + T   +  +  P+ ++F    +  TP       + ++ L+ F    AA   +G +I 
Sbjct: 172 VTLDTPANR--KAMPD-ADF----SSWTP------LEFIAELILFWASGAARPKSGSLIP 218

Query: 241 VDG 243
           V  
Sbjct: 219 VVT 221

Dihydropteridine reductase is an NAD-binding protein related to the SDRs. It converts dihydrobiopterin into tetrahydrobiopterin, a cofactor necessary in catecholamines synthesis. Dihydropteridine reductase has the YXXXK of these tyrosine-dependent oxidoreductases, but lacks the typical upstream Asn and Ser catalytic residues. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 221

>gnl|CDD|180586 PRK06483, PRK06483, dihydromonapterin reductase; Provisional

 Score = 58.4 bits (142), Expect = 3e-10
 Identities = 60/262 (22%), Positives = 99/262 (37%), Gaps = 48/262 (18%)

Query: 1   MTA--LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDL 58
           M A  L+TG  + IG A    L   G  V    R      A +   +  G        D 
Sbjct: 1   MPAPILITGAGQRIGLALAWHLLAQGQPVIVSYRT--HYPA-IDGLRQAG--AQCIQADF 55

Query: 59  SSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVF---- 114
           S+       I+ +     G L  +I+NA+        D  AE      +     +     
Sbjct: 56  STNAGIMAFIDELKQHTDG-LRAIIHNAS--------DWLAEKPGAPLADVLARMMQIHV 106

Query: 115 ----HLSQLAHPLFKASGNGS--IVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEW 168
                L+     L +  G+ +  I+ I+     +G      Y A K A++ +T + A + 
Sbjct: 107 NAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASKAALDNMTLSFAAKL 166

Query: 169 AKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIA-RQ-----TPIGRAGEPDEVSSL 222
           A   ++ N++AP     ++I  F EG       D  A RQ     + +      +E+  L
Sbjct: 167 AP-EVKVNSIAP-----ALIL-FNEG-------DDAAYRQKALAKSLLKIEPGEEEIIDL 212

Query: 223 VAFLCLPAASYITGQIICVDGG 244
           V +L    + Y+TG+ + VDGG
Sbjct: 213 VDYLL--TSCYVTGRSLPVDGG 232

Length = 236

>gnl|CDD|180838 PRK07102, PRK07102, short chain dehydrogenase; Provisional

 Score = 57.6 bits (140), Expect = 5e-10
 Identities = 53/206 (25%), Positives = 74/206 (35%), Gaps = 41/206 (19%)

Query: 1   MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
              L+ G T  I  A     A  GA ++  +R+   L+ RL +             DL +
Sbjct: 2   KKILIIGATSDIARACARRYAAAGARLYLAARDVERLE-RLAD-------------DLRA 47

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFV---KPTVDIT----------------AED 101
           R                +L+IL   +  AF+       DI                    
Sbjct: 48  RGAVAVST--------HELDILDTASHAAFLDSLPALPDIVLIAVGTLGDQAACEADPAL 99

Query: 102 MSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLT 161
                 TNFE    L  L    F+A G+G+IV ISSV G RG  S  +YG+ K A+    
Sbjct: 100 ALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRASNYVYGSAKAALTAFL 159

Query: 162 KNLACEWAKDNIRTNTVAPWVIKTSM 187
             L     K  +   TV P  ++T M
Sbjct: 160 SGLRNRLFKSGVHVLTVKPGFVRTPM 185

Length = 243

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 57.7 bits (140), Expect = 1e-09
 Identities = 56/219 (25%), Positives = 79/219 (36%), Gaps = 23/219 (10%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
            +VTG   GIG  T    AR GA V     ++   +      +  G        D+S  +
Sbjct: 318 VVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDAD 377

Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL-AH 121
             E   E V +   G  +I++NNA I      +D +AED   V   N   V H  +L   
Sbjct: 378 AMEAFAEWVRAE-HGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGR 436

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSL--YGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
            + +    G IV ++S       PS SL  Y   K A+  L++ L  E A   I    + 
Sbjct: 437 QMVERGTGGHIVNVASAAAY--APSRSLPAYATSKAAVLMLSECLRAELAAAGIGVTAIC 494

Query: 180 PWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDE 218
           P  + T                  I   T    A   DE
Sbjct: 495 PGFVDT-----------------NIVATTRFAGADAEDE 516

Length = 582

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 56.5 bits (137), Expect = 2e-09
 Identities = 55/196 (28%), Positives = 84/196 (42%), Gaps = 19/196 (9%)

Query: 1   MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG-FKVTGS-VCDL 58
           +   +TG + GIG A   E AR GA +   +R    L A            V  + V D 
Sbjct: 3   LKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDA 62

Query: 59  SSREQREKLIETVTSIF---QGKLNILINNAAIAFVKPTVDITAED---MSTVSSTNFES 112
            +       +    + F    G  +++I NA I+    T+    ED      V  TN+  
Sbjct: 63  DA-------LAAAAADFIAAHGLPDVVIANAGIS--VGTLTEEREDLAVFREVMDTNYFG 113

Query: 113 VFHLSQ-LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKD 171
           +    Q    P+ +A+  G++V I+SV GVRG+P    Y A K A  +  ++L  E    
Sbjct: 114 MVATFQPFIAPM-RAARRGTLVGIASVAGVRGLPGAGAYSASKAAAIKYLESLRVELRPA 172

Query: 172 NIRTNTVAPWVIKTSM 187
            +R  T+AP  I+T M
Sbjct: 173 GVRVVTIAPGYIRTPM 188

Length = 257

>gnl|CDD|236308 PRK08594, PRK08594, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 56.3 bits (136), Expect = 2e-09
 Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 5/116 (4%)

Query: 130 GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189
           GSIV ++ +GG R + + ++ G  K ++    K LA +  KD IR N ++   I+T   K
Sbjct: 141 GSIVTLTYLGGERVVQNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAK 200

Query: 190 PFEEGPEG-SEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVDGG 244
               G  G +  L  I  + P+ R    +EV    AFL    +  +TG+ I VD G
Sbjct: 201 ----GVGGFNSILKEIEERAPLRRTTTQEEVGDTAAFLFSDLSRGVTGENIHVDSG 252

Length = 257

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 57.0 bits (138), Expect = 2e-09
 Identities = 37/155 (23%), Positives = 60/155 (38%), Gaps = 11/155 (7%)

Query: 4   LVTGGTRGIGHATVEELAR-FGAIVHTCSRNQIELDARLHEWKNKGFKVTGSV-----CD 57
           LVTGG  GIG A    LAR +GA +    R+ +  +           +  G+       D
Sbjct: 209 LVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGARVLYISAD 268

Query: 58  LSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLS 117
           ++      +L+E V   + G ++ +I+ A +         TAED   V +   + + +L+
Sbjct: 269 VTDAAAVRRLLEKVRERY-GAIDGVIHAAGVLRDALLAQKTAEDFEAVLAPKVDGLLNLA 327

Query: 118 QLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGA 152
           Q              V  SSV    G    + Y A
Sbjct: 328 Q----ALADEPLDFFVLFSSVSAFFGGAGQADYAA 358

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs

 Score = 54.8 bits (132), Expect = 3e-09
 Identities = 47/214 (21%), Positives = 78/214 (36%), Gaps = 14/214 (6%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           AL+ G T GIG A    LA  G  +    R+   L A L        +      D+++  
Sbjct: 1   ALILGATGGIGRALARALAGRGWRLLLSGRDAGAL-AGLAAEVGALARPA----DVAAEL 55

Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
           +   L + +     G L++L+  A     KP           +   N      +  L H 
Sbjct: 56  EVWALAQEL-----GPLDLLVYAAGAILGKPLARTKPAAWRRILDANLTGAALV--LKHA 108

Query: 123 LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWV 182
           L   +    +VF+ +   +  +P +S Y A K A+    +    E     +R   V P  
Sbjct: 109 LALLAAGARLVFLGAYPELVMLPGLSAYAAAKAALEAYVEVARKEVRG--LRLTLVRPPA 166

Query: 183 IKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEP 216
           + T +  P    P+G+   + +A        GEP
Sbjct: 167 VDTGLWAPPGRLPKGALSPEDVAAAILEAHQGEP 200

Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206

>gnl|CDD|236173 PRK08177, PRK08177, short chain dehydrogenase; Provisional

 Score = 54.7 bits (132), Expect = 5e-09
 Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 18/193 (9%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           TAL+ G +RG+G   V+ L   G  V    R   + D  L         V     D++  
Sbjct: 3   TALIIGASRGLGLGLVDRLLERGWQVTATVRGP-QQDTALQALPG----VHIEKLDMNDP 57

Query: 62  EQREKLIETVTSIFQGK-LNILINNAAIA--FVKPTVDITAEDMSTVSSTNFESVFHLSQ 118
              ++L++ +    QG+  ++L  NA I+    +   D TA ++  +  TN  +   L++
Sbjct: 58  ASLDQLLQRL----QGQRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLAR 113

Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIP---SVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
                 +  G G + F+SS  G   +P    + LY A K A+N +T++   E  +  +  
Sbjct: 114 RLLGQVRP-GQGVLAFMSSQLGSVELPDGGEMPLYKASKAALNSMTRSFVAELGEPTLTV 172

Query: 176 NTVAP-WVIKTSM 187
            ++ P WV KT M
Sbjct: 173 LSMHPGWV-KTDM 184

Length = 225

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 55.4 bits (134), Expect = 5e-09
 Identities = 50/218 (22%), Positives = 81/218 (37%), Gaps = 39/218 (17%)

Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVC------- 56
           L+TG   G G+   ++L   G  V      +             G K    VC       
Sbjct: 4   LITGCDSGFGNLLAKKLDSLGFTVLAGCLTKNG----------PGAKELRRVCSDRLRTL 53

Query: 57  --DLSSREQREKLIETVTSIFQGK-LNILINNAAI-AFVKPTVDITAEDMSTVSSTNFES 112
             D++  EQ ++  + V      K L  L+NNA I  F      +  +D       N   
Sbjct: 54  QLDVTKPEQIKRAAQWVKEHVGEKGLWGLVNNAGILGFGGDEELLPMDDYRKCMEVNLFG 113

Query: 113 VFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDN 172
              +++   PL + +  G +V +SS+GG    P+   Y A K A+   + +L  E     
Sbjct: 114 TVEVTKAFLPLLRRA-KGRVVNVSSMGGRVPFPAGGAYCASKAAVEAFSDSLRRE----- 167

Query: 173 IRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPI 210
                + PW +K S+I+P         F  GI   + +
Sbjct: 168 -----LQPWGVKVSIIEP-------GNFKTGITGNSEL 193

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score = 54.8 bits (132), Expect = 7e-09
 Identities = 55/212 (25%), Positives = 79/212 (37%), Gaps = 41/212 (19%)

Query: 2   TALVTGGTRGIGHATVEELARFGA-IVHTC-SRNQIELDARLHEWKNKGFKVTGSVCDLS 59
           T ++TG   GIG  T  ELAR GA ++  C    + E  A          +V     DL+
Sbjct: 3   TVIITGANTGIGKETARELARRGARVIMACRDMAKCEEAAAEIRRDTLNHEVIVRHLDLA 62

Query: 60  S----REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFH 115
           S    R    + +       + +L++LINNA +    P      ED        FE  F 
Sbjct: 63  SLKSIRAFAAEFLAE-----EDRLDVLINNAGV-MRCPYS--KTED-------GFEMQFG 107

Query: 116 LSQLAHPLF--------KASGNGSIVFISSVGGVRG-IPSVSL-----------YGAYKG 155
           ++ L H L         K S    IV +SS+    G I    L           Y   K 
Sbjct: 108 VNHLGHFLLTNLLLDLLKKSAPSRIVNVSSLAHKAGKINFDDLNSEKSYNTGFAYCQSKL 167

Query: 156 AMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM 187
           A    T+ LA       +  N + P V++T +
Sbjct: 168 ANVLFTRELARRLQGTGVTVNALHPGVVRTEL 199

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 54.6 bits (132), Expect = 8e-09
 Identities = 48/179 (26%), Positives = 72/179 (40%), Gaps = 7/179 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           T L+TG   G G      LAR G  V    +   ++ A   E   +G  +     DL+  
Sbjct: 4   TILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDA 63

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
             R +         +  +++L+NNA I      VDI  E +  +  TN      L+Q   
Sbjct: 64  IDRAQ-------AAEWDVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFV 116

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
               A G G +VF SS+ G+   P    Y A K A+  + + +  E     I+  TV P
Sbjct: 117 RKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALEAIAEAMHAELKPFGIQVATVNP 175

Length = 257

>gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase

 Score = 54.1 bits (130), Expect = 1e-08
 Identities = 53/198 (26%), Positives = 84/198 (42%), Gaps = 17/198 (8%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIEL----DARLHEWKNKGFKVTGSVCDL 58
           ALVTG T GIG     +LAR G  +   +RN  +L    D+   ++     K    V D 
Sbjct: 56  ALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTV--VVDF 113

Query: 59  SS--REQREKLIETVTSIFQGKLNILINNAAIAF--VKPTVDITAEDMSTVSSTNFESVF 114
           S    E  +++ ET+  +  G   +LINN  +++   +   ++  E +  +   N E   
Sbjct: 114 SGDIDEGVKRIKETIEGLDVG---VLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTT 170

Query: 115 HLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGA---MNQLTKNLACEWAKD 171
            ++Q   P       G+I+ I S G    IPS  LY  Y      ++Q ++ L  E+ K 
Sbjct: 171 KVTQAVLPGMLKRKKGAIINIGS-GAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKKS 229

Query: 172 NIRTNTVAPWVIKTSMIK 189
            I      P  + T M  
Sbjct: 230 GIDVQCQVPLYVATKMAS 247

Length = 320

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 53.5 bits (129), Expect = 1e-08
 Identities = 44/205 (21%), Positives = 77/205 (37%), Gaps = 3/205 (1%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDA-RLHEWKNKGFKVTGSVCDLSS 60
            A V G   G+G A     A  G  V   +R + +L+A  +   ++ G        D   
Sbjct: 1   VAAVVGAGDGLGAAIARRFAAEGFSVALAARREAKLEALLVDIIRDAGGSAKAVPTDARD 60

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
            ++   L + +     G L +L+ NA      P ++ T      V        F  ++ A
Sbjct: 61  EDEVIALFDLIEEEI-GPLEVLVYNAGANVWFPILETTPRVFEKVWEMAAFGGFLAAREA 119

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIR-TNTVA 179
                A G G+I+F  +   +RG    + +   K A+  L +++A E     I   + + 
Sbjct: 120 AKRMLARGRGTIIFTGATASLRGRAGFAAFAGAKFALRALAQSMARELGPKGIHVAHVII 179

Query: 180 PWVIKTSMIKPFEEGPEGSEFLDGI 204
              I T  I+      +  +  DGI
Sbjct: 180 DGGIDTDFIRERFPKRDERKEEDGI 204

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|181187 PRK07984, PRK07984, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 53.8 bits (129), Expect = 2e-08
 Identities = 32/122 (26%), Positives = 61/122 (50%), Gaps = 9/122 (7%)

Query: 129 NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKT--- 185
             +++ +S +G  R IP+ ++ G  K ++    + +A     + +R N ++   I+T   
Sbjct: 138 GSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAA 197

Query: 186 SMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVDGGV 245
           S IK F +       L      TPI R    ++V +  AFLC   ++ I+G+++ VDGG 
Sbjct: 198 SGIKDFRK------MLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGF 251

Query: 246 TV 247
           ++
Sbjct: 252 SI 253

Length = 262

>gnl|CDD|180796 PRK07023, PRK07023, short chain dehydrogenase; Provisional

 Score = 53.1 bits (128), Expect = 2e-08
 Identities = 49/198 (24%), Positives = 82/198 (41%), Gaps = 24/198 (12%)

Query: 1   MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ-IELDARLHEWKNKGFKVTGSVCDLS 59
           + A+VTG +RG+G A  E+L + G  V   +R++   L A   E      ++     DLS
Sbjct: 2   VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAAAAGE------RLAEVELDLS 55

Query: 60  SREQREKLIETVTSIFQGKLN-----ILINNAAIAFVKPTVDITAEDMSTVS---STNFE 111
                   +          ++     +LINNA    V+P   +   D + ++     N  
Sbjct: 56  DAAAAAAWLAGDL--LAAFVDGASRVLLINNAGT--VEPIGPLATLDAAAIARAVGLNVA 111

Query: 112 SVFHLSQLAHPLFKASGNGS--IVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA 169
           +   L+  A     AS      I+ ISS          S+Y A K A++   + +A + A
Sbjct: 112 APLMLT--AALAQAASDAAERRILHISSGAARNAYAGWSVYCATKAALDHHARAVALD-A 168

Query: 170 KDNIRTNTVAPWVIKTSM 187
              +R  ++AP V+ T M
Sbjct: 169 NRALRIVSLAPGVVDTGM 186

Length = 243

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 53.0 bits (128), Expect = 3e-08
 Identities = 68/271 (25%), Positives = 104/271 (38%), Gaps = 50/271 (18%)

Query: 2   TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQ--------IELDARLHEWKNKGFKVT 52
           T  +TG +RGIG A     AR GA IV      +        I   A   E +  G +  
Sbjct: 8   TLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAE--EIEAAGGQAL 65

Query: 53  GSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFES 112
             V D+   +Q    +      F G ++I +NNA+   +  T D   +    +   N   
Sbjct: 66  PLVGDVRDEDQVAAAVAKAVERF-GGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRG 124

Query: 113 VFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSL-------YGAY---KGAMNQLTK 162
            F +SQ   P  K S N  I+ +S        P ++L       + AY   K  M+  T 
Sbjct: 125 TFLVSQACLPHLKKSENPHILTLS--------PPLNLDPKWFAPHTAYTMAKYGMSLCTL 176

Query: 163 NLACEWAKDNIRTNTVAP-WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVS- 220
            LA E+  D I  N + P   I T+ ++    G E             + R+  P+ ++ 
Sbjct: 177 GLAEEFRDDGIAVNALWPRTTIATAAVRNLLGGDEA------------MRRSRTPEIMAD 224

Query: 221 SLVAFLCLPAASYITGQ-IICVD----GGVT 246
           +    L  PA  + TG  +I  +     GVT
Sbjct: 225 AAYEILSRPAREF-TGNFLIDEEVLREAGVT 254

Length = 273

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 53.1 bits (128), Expect = 3e-08
 Identities = 47/227 (20%), Positives = 79/227 (34%), Gaps = 24/227 (10%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELD---ARLHEWKNKGFKVTGSVCDL 58
             +VTG  RGIG      L   GA +      + EL    A L    ++   V   V DL
Sbjct: 11  VVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG-DDRVLTVVADVTDL 69

Query: 59  SS-----REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESV 113
           ++      E  E+          G +++++ NA IA       +  +    V   N   V
Sbjct: 70  AAMQAAAEEAVERF---------GGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGV 120

Query: 114 FHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNI 173
           FH  +   P       G ++ +SS+      P ++ Y A K  +      L  E A   +
Sbjct: 121 FHTVRATLPALIERR-GYVLQVSSLAAFAAAPGMAAYCASKAGVEAFANALRLEVAHHGV 179

Query: 174 RTNTVAPWVIKTSMIK-PFEEGPEGSEFLDG----IARQTPIGRAGE 215
              +     I T +++    + P   E        + R T + +   
Sbjct: 180 TVGSAYLSWIDTDLVRDADADLPAFRELRARLPWPLRRTTSVEKCAA 226

Length = 296

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 51.4 bits (124), Expect = 5e-08
 Identities = 45/156 (28%), Positives = 67/156 (42%), Gaps = 11/156 (7%)

Query: 2   TALVTGGTRGIGHATVEELARFGA--IVHTCSRNQI---ELDARLHEWKNKGFKVTGSVC 56
           T LVTGG  G+G      LA  GA  +V   SR+     E +A L E + +G +VT   C
Sbjct: 2   TYLVTGGLGGLGLELARWLAERGARHLV-LLSRSGAPDPEAEALLAELEARGAEVTVVAC 60

Query: 57  DLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHL 116
           D+S R+    L+  + +     L  +I+ A +       ++TAED + V           
Sbjct: 61  DVSDRDAVRALLAEIRADG-PPLRGVIHAAGVLRDALLANMTAEDFARV----LAPKVTG 115

Query: 117 SQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGA 152
           +   H   +       V  SS+ GV G P  + Y A
Sbjct: 116 AWNLHEATRDRPLDFFVLFSSIAGVLGSPGQANYAA 151

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 51.9 bits (125), Expect = 5e-08
 Identities = 59/198 (29%), Positives = 87/198 (43%), Gaps = 26/198 (13%)

Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK------NKGFKVTGSVCD 57
           L+TG + G+G     E A  G  +  C+R     D RL E K        G KV  +  D
Sbjct: 6   LITGASSGLGAGMAREFAAKGRDLALCAR---RTD-RLEELKAELLARYPGIKVAVAALD 61

Query: 58  LSSREQREKLIETVTSIFQGKLNILINNAAIAFVKP-------TVDITAEDMSTVSSTNF 110
           ++  +Q  ++         G L+ +I NA I                TAE       TNF
Sbjct: 62  VNDHDQVFEVFAEFRDEL-GGLDRVIVNAGIGKGARLGTGKFWANKATAE-------TNF 113

Query: 111 ESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSV-SLYGAYKGAMNQLTKNLACEWA 169
            +     + A  +F+  G+G +V ISSV  VRG+P V + Y A K  +  L + L  E A
Sbjct: 114 VAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYAASKAGVASLGEGLRAELA 173

Query: 170 KDNIRTNTVAPWVIKTSM 187
           K  I+ +T+ P  I++ M
Sbjct: 174 KTPIKVSTIEPGYIRSEM 191

Length = 248

>gnl|CDD|168626 PRK06603, PRK06603, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 51.9 bits (124), Expect = 6e-08
 Identities = 44/156 (28%), Positives = 69/156 (44%), Gaps = 11/156 (7%)

Query: 95  VDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYK 154
           VD + E+       +  S+  LS+ A  L      GSIV ++  G  + IP+ ++ G  K
Sbjct: 107 VDTSLENFHNSLHISCYSLLELSRSAEALM--HDGGSIVTLTYYGAEKVIPNYNVMGVAK 164

Query: 155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKT---SMIKPFEEGPEGSEFLDGIARQTPIG 211
            A+    K LA +  ++NIR N ++   IKT   S I  F      S  L   A   P+ 
Sbjct: 165 AALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDF------STMLKSHAATAPLK 218

Query: 212 RAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTV 247
           R    ++V     +L    +  +TG+I  VD G  +
Sbjct: 219 RNTTQEDVGGAAVYLFSELSKGVTGEIHYVDCGYNI 254

Length = 260

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 51.5 bits (123), Expect = 1e-07
 Identities = 48/173 (27%), Positives = 65/173 (37%), Gaps = 34/173 (19%)

Query: 1   MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
           M  LVTGG   IG   VE L   G  V    R +  LD  L         V   V DL+ 
Sbjct: 1   MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLSG-------VEFVVLDLTD 53

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
           R+  ++L + V           I+ AA + V  +      +   V   N +   +L + A
Sbjct: 54  RDLVDELAKGVPDAV-------IHLAAQSSVPDSNASDPAEFLDV---NVDGTLNLLEAA 103

Query: 121 HPLFKASGNGSIVFISSVGGVRGIP-------------SVSLYGAYKGAMNQL 160
               +A+G    VF SSV  V G P              ++ YG  K A  QL
Sbjct: 104 ----RAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQL 152

Length = 314

>gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs

 Score = 51.1 bits (122), Expect = 1e-07
 Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 13/142 (9%)

Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGS------VCD 57
           L+TG   GIG A    +A+ G  VH   RNQ     R  E + +    +G+      + D
Sbjct: 5   LITGANSGIGKAAALAIAKRGGTVHMVCRNQ----TRAEEARKEIETESGNQNIFLHIVD 60

Query: 58  LSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLS 117
           +S  +Q  + +E      + KL++LINNA     K   ++T + +    +TN    + L+
Sbjct: 61  MSDPKQVWEFVEEFKEEGK-KLHVLINNAGCMVNKR--ELTEDGLEKNFATNTLGTYILT 117

Query: 118 QLAHPLFKASGNGSIVFISSVG 139
               P+ +   +  ++ +SS G
Sbjct: 118 THLIPVLEKEEDPRVITVSSGG 139

Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 50.9 bits (122), Expect = 1e-07
 Identities = 46/182 (25%), Positives = 85/182 (46%), Gaps = 7/182 (3%)

Query: 1   MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLS 59
           M  LVTG T G G        + G  V    R Q     RL E K++ G  +  +  D+ 
Sbjct: 1   MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQ----ERLQELKDELGDNLYIAQLDVR 56

Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQ 118
           +R   E+++ ++ + ++  +++L+NNA +A  ++P    + ED  T+  TN + + ++++
Sbjct: 57  NRAAIEEMLASLPAEWR-NIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTR 115

Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
              P      +G I+ I S  G       ++YGA K  + Q + NL  +     +R   +
Sbjct: 116 AVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDI 175

Query: 179 AP 180
            P
Sbjct: 176 EP 177

Length = 248

>gnl|CDD|233441 TIGR01500, sepiapter_red, sepiapterin reductase

 Score = 50.7 bits (121), Expect = 2e-07
 Identities = 51/202 (25%), Positives = 83/202 (41%), Gaps = 20/202 (9%)

Query: 3   ALVTGGTRGIGHATVEELARF----GAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDL 58
            LVTG +RG G    +ELA+     G+++   +RN   L     E    G + +G     
Sbjct: 3   CLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEI---GAERSGLRVVR 59

Query: 59  SSRE-QREKLIETVTSIFQ--GKLN-----ILINNAAIAFVKPTVDITAEDMSTVSSTNF 110
            S +   E  +E +    +   +       +LINNA          +   D + V +   
Sbjct: 60  VSLDLGAEAGLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWA 119

Query: 111 ESVFHLSQLAHPLFKA-----SGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLA 165
            ++  +  L   + KA       N ++V ISS+  ++     +LY A K A + L + LA
Sbjct: 120 LNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKGWALYCAGKAARDMLFQVLA 179

Query: 166 CEWAKDNIRTNTVAPWVIKTSM 187
            E    N+R    AP V+ T M
Sbjct: 180 LEEKNPNVRVLNYAPGVLDTDM 201

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. Length = 256

>gnl|CDD|187582 cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatty acid synthase (FAS), complex (x) SDRs

 Score = 50.1 bits (120), Expect = 4e-07
 Identities = 36/153 (23%), Positives = 57/153 (37%), Gaps = 11/153 (7%)

Query: 4   LVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDA--RLHEWKNKGFKVTGSVCDLS 59
           L+TGG  G+G      LA  GA  +V   SR      A  R    +  G +V+   CD++
Sbjct: 154 LITGGLGGLGLLVARWLAARGARHLV-LLSRRGPAPRAAARAALLRAGGARVSVVRCDVT 212

Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
                  L+  + +   G L  +I+ A +       ++T    + V +       +L   
Sbjct: 213 DPAALAALLAELAA--GGPLAGVIHAAGVLRDALLAELTPAAFAAVLAAKVAGALNL--- 267

Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGA 152
            H L         V  SSV  + G    + Y A
Sbjct: 268 -HELTPDLPLDFFVLFSSVAALLGGAGQAAYAA 299

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. In some instances, such as porcine FAS, an enoyl reductase (ER) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consist of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthase uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-KR, forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-ER. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 375

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 48.5 bits (116), Expect = 9e-07
 Identities = 50/199 (25%), Positives = 78/199 (39%), Gaps = 19/199 (9%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           + L+TG + GIG      L   G  V    R + ++ A L   + +G  +     D +  
Sbjct: 6   SILITGCSSGIGAYCARALQSDGWRVFATCRKEEDV-AAL---EAEG--LEAFQLDYAEP 59

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           E    L+  V  +  G+L+ L NN A        D+  E +      NF     L++   
Sbjct: 60  ESIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVI 119

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P+ +  G G IV  SS+ G+  +     Y A K A+  L+  L  E              
Sbjct: 120 PVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAIEGLSLTLRMELQGSG--------- 170

Query: 182 VIKTSMIKPFEEGPEGSEF 200
            I  S+I+P   GP  + F
Sbjct: 171 -IHVSLIEP---GPIETRF 185

Length = 277

>gnl|CDD|180399 PRK06101, PRK06101, short chain dehydrogenase; Provisional

 Score = 46.8 bits (111), Expect = 3e-06
 Identities = 46/187 (24%), Positives = 70/187 (37%), Gaps = 12/187 (6%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             L+TG T GIG     + A+ G  V  C RNQ  LD  LH      F +   V D    
Sbjct: 3   AVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDE-LHTQSANIFTLAFDVTD---- 57

Query: 62  EQREKLIETVTSI-FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
                    ++ + F  +L I  N     ++     + A  M+ V + N   V +  +  
Sbjct: 58  --HPGTKAALSQLPFIPELWIF-NAGDCEYMDDGK-VDATLMARVFNVNVLGVANCIEGI 113

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
            P    S    +V + S+     +P    YGA K A+    + L  +     I   TV P
Sbjct: 114 QPHL--SCGHRVVIVGSIASELALPRAEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFP 171

Query: 181 WVIKTSM 187
             + T +
Sbjct: 172 GFVATPL 178

Length = 240

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 46.8 bits (112), Expect = 4e-06
 Identities = 41/181 (22%), Positives = 75/181 (41%), Gaps = 8/181 (4%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDA--RLHEWKNKGFKVTGSVCDLS 59
           T L+TG + G G A  +     G  V    R++        LH       +    + D++
Sbjct: 6   TWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALH-----PDRALARLLDVT 60

Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
             +  + ++    + F G +++L+NNA         +    +M      N      +++ 
Sbjct: 61  DFDAIDAVVADAEATF-GPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKA 119

Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
             P  +A   G IV I+S+GG+  +P +  Y   K A+  ++++LA E A   I    V 
Sbjct: 120 VLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALEGISESLAKEVAPFGIHVTAVE 179

Query: 180 P 180
           P
Sbjct: 180 P 180

Length = 277

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 46.3 bits (110), Expect = 5e-06
 Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 2/87 (2%)

Query: 2  TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE-LDARLHEWKNKGFKVTGSVCDLSS 60
          TALVTG +RGIG  T + LA  GA V    R +    +  + E +  G + +    DL+ 
Sbjct: 8  TALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTD 67

Query: 61 REQREKLIETVTSIFQGKLNILINNAA 87
           E    L++T    F G L+ L+ NA+
Sbjct: 68 EESVAALMDTAREEF-GGLDALVLNAS 93

Length = 248

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score = 46.1 bits (109), Expect = 6e-06
 Identities = 38/140 (27%), Positives = 58/140 (41%), Gaps = 9/140 (6%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDAR----LHEWKNKGFKVTGSVCD 57
             ++TG   GIG  T    A  GA V    RN     A     L EW     +V     D
Sbjct: 3   VIIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEEWHKA--RVEAMTLD 60

Query: 58  LSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLS 117
           L+S    ++  E   +     L++L+ NAA+ F  P   +T + + T    N    F+L 
Sbjct: 61  LASLRSVQRFAEAFKAK-NSPLHVLVCNAAV-FALPWT-LTEDGLETTFQVNHLGHFYLV 117

Query: 118 QLAHPLFKASGNGSIVFISS 137
           QL   + + S    ++ +SS
Sbjct: 118 QLLEDVLRRSAPARVIVVSS 137

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 46.3 bits (110), Expect = 6e-06
 Identities = 51/219 (23%), Positives = 87/219 (39%), Gaps = 27/219 (12%)

Query: 2   TALVTGGTRGIGHATVEEL-ARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
           T  +TG + G G    E L AR   +  T  R     D  L         V     D++ 
Sbjct: 4   TWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDD--LKARYGDRLWV--LQLDVTD 59

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
                 +++   +   G+++++++NA         +++   +     TN      + + A
Sbjct: 60  SAAVRAVVDRAFAAL-GRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAA 118

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
            P  +  G G IV +SS GG    P  SLY A K  +    + +A E          VAP
Sbjct: 119 LPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEGFVEAVAQE----------VAP 168

Query: 181 WVIKTSMIKPFEEGPEGSEFLDGIAR--------QTPIG 211
           + I+ ++++P   GP  + F  G+ R         TP+G
Sbjct: 169 FGIEFTIVEP---GPARTNFGAGLDRGAPLDAYDDTPVG 204

Length = 276

>gnl|CDD|235776 PRK06300, PRK06300, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 45.6 bits (108), Expect = 9e-06
 Identities = 50/195 (25%), Positives = 83/195 (42%), Gaps = 36/195 (18%)

Query: 67  LIETVTSIFQGKLNILINNAAIA--FVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLF 124
           + E V   F G ++IL+++ A +    KP ++ + +      ST+  S   L     P+ 
Sbjct: 109 VAEQVKKDF-GHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIM 167

Query: 125 KASGNGSIVFISSVGGVRGIPSVSLYG----AYKGAMNQLTKNLACEWAKD-NIRTNTVA 179
              G  S + ++ +  +R +P    YG    + K A+   TK LA E  +   IR NT++
Sbjct: 168 NPGG--STISLTYLASMRAVPG---YGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTIS 222

Query: 180 PWVIKTSMIKPFEEGPEGSE------FLDGI----ARQTPIGRAGEPDEVSSLVAFLCLP 229
                         GP  S       F++ +        P+    E ++V +  AFL  P
Sbjct: 223 A-------------GPLASRAGKAIGFIERMVDYYQDWAPLPEPMEAEQVGAAAAFLVSP 269

Query: 230 AASYITGQIICVDGG 244
            AS ITG+ + VD G
Sbjct: 270 LASAITGETLYVDHG 284

Length = 299

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 45.1 bits (107), Expect = 1e-05
 Identities = 41/186 (22%), Positives = 74/186 (39%), Gaps = 1/186 (0%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            ALV G + GIG AT  ELA  G  V   +R   + +  + + +  G +      D++  
Sbjct: 12  PALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDP 71

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           +  +  +        G++ +L++ A   +     +I+ E   +    +      L+    
Sbjct: 72  DSVKSFVAQAEEAL-GEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVL 130

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P       G ++F+ S   +R  P +  YGA K  +  +  NL  E     +R + V P 
Sbjct: 131 PGMIERRRGDLIFVGSDVALRQRPHMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPG 190

Query: 182 VIKTSM 187
              T M
Sbjct: 191 PTLTGM 196

Length = 274

>gnl|CDD|178331 PLN02730, PLN02730, enoyl-[acyl-carrier-protein] reductase

 Score = 44.8 bits (106), Expect = 2e-05
 Identities = 57/201 (28%), Positives = 87/201 (43%), Gaps = 38/201 (18%)

Query: 65  EKLIETVTSIFQGKLNILINNAA--IAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
           +++ E+V + F G ++IL+++ A      KP ++ + +      S +  S   L Q   P
Sbjct: 108 QEVAESVKADF-GSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGP 166

Query: 123 LFKASGNG-SIVFISSVGGVRGIPSVSLYG----AYKGAMNQLTKNLACEWA-KDNIRTN 176
           +    G   S+ +I+S    R IP    YG    + K A+   T+ LA E   K  IR N
Sbjct: 167 IMNPGGASISLTYIASE---RIIPG---YGGGMSSAKAALESDTRVLAFEAGRKYKIRVN 220

Query: 177 TVAPWVIKTSMIKPFEEGPEGSE------FLDGIAR----QTPIGRAGEPDEVSSLVAFL 226
           T++              GP GS       F+D +        P+ +    DEV +  AFL
Sbjct: 221 TISA-------------GPLGSRAAKAIGFIDDMIEYSYANAPLQKELTADEVGNAAAFL 267

Query: 227 CLPAASYITGQIICVDGGVTV 247
             P AS ITG  I VD G+  
Sbjct: 268 ASPLASAITGATIYVDNGLNA 288

Length = 303

>gnl|CDD|181260 PRK08159, PRK08159, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 43.6 bits (103), Expect = 3e-05
 Identities = 49/201 (24%), Positives = 87/201 (43%), Gaps = 20/201 (9%)

Query: 56  CDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPT------VDITAEDMSTVSSTN 109
           CD++     + + ET+   + GKL+ +++  AI F          VD + ++ +     +
Sbjct: 67  CDVTDEASIDAVFETLEKKW-GKLDFVVH--AIGFSDKDELTGRYVDTSRDNFTMTMDIS 123

Query: 110 FESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA 169
             S   ++Q A  L    G  SI+ ++  G  + +P  ++ G  K A+    K LA +  
Sbjct: 124 VYSFTAVAQRAEKLMTDGG--SILTLTYYGAEKVMPHYNVMGVAKAALEASVKYLAVDLG 181

Query: 170 KDNIRTNTVAPWVIKT---SMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFL 226
             NIR N ++   IKT   S I  F    + +E+        P+ R    +EV     +L
Sbjct: 182 PKNIRVNAISAGPIKTLAASGIGDFRYILKWNEY------NAPLRRTVTIEEVGDSALYL 235

Query: 227 CLPAASYITGQIICVDGGVTV 247
               +  +TG++  VD G  V
Sbjct: 236 LSDLSRGVTGEVHHVDSGYHV 256

Length = 272

>gnl|CDD|236124 PRK07889, PRK07889, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 43.0 bits (102), Expect = 5e-05
 Identities = 49/175 (28%), Positives = 68/175 (38%), Gaps = 31/175 (17%)

Query: 87  AIAFVKPTV------DITAEDMSTVSSTNFESVFHLSQLAH---PLFKASGNGSIV---F 134
           +I F   +       D   ED++T       S + L  LA    PL      GSIV   F
Sbjct: 92  SIGFAPQSALGGNFLDAPWEDVATALHV---SAYSLKSLAKALLPLMNE--GGSIVGLDF 146

Query: 135 ISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEG 194
            ++V      P+    G  K A+    + LA +     IR N VA   I+T   K     
Sbjct: 147 DATVA----WPAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAI--- 199

Query: 195 PEGSEFLDGIARQTPIG-RAGEPDEVSSLVAFLC---LPAASYITGQIICVDGGV 245
           P      +G   + P+G    +P  V+  V  L     PA    TG+I+ VDGG 
Sbjct: 200 PGFELLEEGWDERAPLGWDVKDPTPVARAVVALLSDWFPA---TTGEIVHVDGGA 251

Length = 256

>gnl|CDD|181609 PRK09009, PRK09009, C factor cell-cell signaling protein; Provisional

 Score = 42.7 bits (101), Expect = 6e-05
 Identities = 62/242 (25%), Positives = 98/242 (40%), Gaps = 56/242 (23%)

Query: 1   MTALVTGGTRGIGHATVEEL-ARF-GAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDL 58
           M  L+ GG+ GIG A V++L  R+  A VH   R+         ++++    V     D+
Sbjct: 1   MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKP------DFQHD--NVQWHALDV 52

Query: 59  SSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAE-DMSTVSSTNFESVFHLS 117
           +   + ++L E  T +     + LIN   +     T D   E  +  + +  F     L+
Sbjct: 53  TDEAEIKQLSEQFTQL-----DWLINCVGMLH---TQDKGPEKSLQALDADFFLQNITLN 104

Query: 118 QLA------H--PLFKASGNGSIVFISS-VGGVRGIPSVS--------LYGAYKGAMNQL 160
            L       H  P  K S +     IS+ VG      S+S         Y A K A+N  
Sbjct: 105 TLPSLLLAKHFTPKLKQSESAKFAVISAKVG------SISDNRLGGWYSYRASKAALNMF 158

Query: 161 TKNLACEWAKDNIRTNTVA---PWVIKTSMIKPFEEG-PEGSEF---------LDGIARQ 207
            K L+ EW + +++   V    P    T++ KPF++  P+G  F         L  IA  
Sbjct: 159 LKTLSIEWQR-SLKHGVVLALHPGTTDTALSKPFQQNVPKGKLFTPEYVAQCLLGIIANA 217

Query: 208 TP 209
           TP
Sbjct: 218 TP 219

Length = 235

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 42.4 bits (100), Expect = 1e-04
 Identities = 49/205 (23%), Positives = 81/205 (39%), Gaps = 27/205 (13%)

Query: 2   TALVTGGTRGIGHATVEELARFGA---IVHTCSRNQIELDARLH----EWKNKGFKVTGS 54
           T  +TG +RGIG A   + AR GA   I    +    +L   ++    E +  G K    
Sbjct: 5   TLFITGASRGIGKAIALKAARDGANVVIAAKTAEPHPKLPGTIYTAAEEIEAAGGKALPC 64

Query: 55  VCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVF 114
           + D+   +Q    +E     F G ++IL+NNA+   +  T+D   +    +   N    +
Sbjct: 65  IVDIRDEDQVRAAVEKAVEKF-GGIDILVNNASAISLTGTLDTPMKRYDLMMGVNTRGTY 123

Query: 115 HLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSL----------YGAYKGAMNQLTKNL 164
             S+   P  K S N  I+ +S        P ++L          Y   K  M+     +
Sbjct: 124 LCSKACLPYLKKSKNPHILNLS--------PPLNLNPKWFKNHTAYTMAKYGMSMCVLGM 175

Query: 165 ACEWAKDNIRTNTVAP-WVIKTSMI 188
           A E+    I  N + P   I T+ +
Sbjct: 176 AEEFKPGGIAVNALWPRTAIATAAM 200

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|235627 PRK05854, PRK05854, short chain dehydrogenase; Provisional

 Score = 41.6 bits (98), Expect = 2e-04
 Identities = 43/152 (28%), Positives = 66/152 (43%), Gaps = 23/152 (15%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK--NKGFKVTGSVCDLSS 60
           A+VTG + G+G      LA  GA V    RN+ + +A +   +      K++    DLSS
Sbjct: 17  AVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSS 76

Query: 61  REQREKLIETVTSIFQGK-LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
                 L E + +  +G+ +++LINNA +    P    TA+         FE  F  + L
Sbjct: 77  LASVAALGEQLRA--EGRPIHLLINNAGV-MTPPERQTTAD--------GFELQFGTNHL 125

Query: 120 AH--------PLFKASGNGSIVFISSVGGVRG 143
            H        PL +A G   +   SS+   RG
Sbjct: 126 GHFALTAHLLPLLRA-GRARVTSQSSIAARRG 156

Length = 313

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 41.1 bits (97), Expect = 2e-04
 Identities = 42/176 (23%), Positives = 64/176 (36%), Gaps = 36/176 (20%)

Query: 3   ALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
            LVTGGT  IG   V  L + G   IV    R    L+     +            DL+ 
Sbjct: 1   ILVTGGTGFIGSHLVRRLLQEGYEVIVLGRRRRSESLNTGRIRFHE---------GDLTD 51

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
            +  E+L+       + + + +I+ AA + V  + +  A+ +      N      L + A
Sbjct: 52  PDALERLLA------EVQPDAVIHLAAQSGVGASFEDPADFI----RANVLGTLRLLEAA 101

Query: 121 HPLFKASGNGSIVFISSV---GGVRGIPS--------VSLYGAYKGAMNQLTKNLA 165
                 +G    VF SS    G V   P         +S Y A K A  +L +  A
Sbjct: 102 R----RAGVKRFVFASSSEVYGDVADPPITEDTPLGPLSPYAAAKLAAERLVEAYA 153

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|180596 PRK06505, PRK06505, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 40.5 bits (95), Expect = 4e-04
 Identities = 47/199 (23%), Positives = 84/199 (42%), Gaps = 31/199 (15%)

Query: 68  IETVTSIFQ------GKLNILINNAAIAFVKPT------VDITAEDMSTVSSTNFESVFH 115
           I +V ++F+      GKL+ +++  AI F           D T E+ S     +  S   
Sbjct: 69  IASVDAVFEALEKKWGKLDFVVH--AIGFSDKNELKGRYADTTRENFSRTMVISCFSFTE 126

Query: 116 LSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
           +++ A  L      GS++ ++  G  R +P+ ++ G  K A+    + LA ++    IR 
Sbjct: 127 IAKRAAKLM--PDGGSMLTLTYGGSTRVMPNYNVMGVAKAALEASVRYLAADYGPQGIRV 184

Query: 176 NTVAPWVIKTSMIKPFEEGPEGSEFLDGIA------RQTPIGRAGEPDEVSSLVAFLCLP 229
           N ++   ++T           G+   D  A      R +P+ R    DEV     +L   
Sbjct: 185 NAISAGPVRTL---------AGAGIGDARAIFSYQQRNSPLRRTVTIDEVGGSALYLLSD 235

Query: 230 AASYITGQIICVDGGVTVT 248
            +S +TG+I  VD G  + 
Sbjct: 236 LSSGVTGEIHFVDSGYNIV 254

Length = 271

>gnl|CDD|135642 PRK05884, PRK05884, short chain dehydrogenase; Provisional

 Score = 39.8 bits (93), Expect = 5e-04
 Identities = 61/255 (23%), Positives = 90/255 (35%), Gaps = 39/255 (15%)

Query: 1   MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
           +  LVTGG   +G    E     G  V      + +L     E   K   V   VCD + 
Sbjct: 1   VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDL-----EVAAKELDVDAIVCDNTD 55

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKP------TVDITAEDMSTVSSTNFESVF 114
                  +E    +F   L+ ++N  A ++           D      + + +T   +V 
Sbjct: 56  PAS----LEEARGLFPHHLDTIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVL 111

Query: 115 HLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIR 174
            +  +   L   SG GSI+ +       G    S   A K A++  T   A  +    I 
Sbjct: 112 TVQSVGDHL--RSG-GSIISVVPENPPAG----SAEAAIKAALSNWTAGQAAVFGTRGIT 164

Query: 175 TNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYI 234
            N VA              G       DG++R TP   A E   ++ L  FL  PAA +I
Sbjct: 165 INAVAC-------------GRSVQPGYDGLSR-TPPPVAAE---IARLALFLTTPAARHI 207

Query: 235 TGQIICVDGGVTVTV 249
           TGQ + V  G     
Sbjct: 208 TGQTLHVSHGALAHF 222

Length = 223

>gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs

 Score = 38.4 bits (90), Expect = 0.002
 Identities = 43/195 (22%), Positives = 63/195 (32%), Gaps = 50/195 (25%)

Query: 1   MTALVTGGTRGIGHATVEELARFGAIVH---TCSRNQIELDARLHEWKNKGFKVTGSVCD 57
           M  L+TGG   IG        + G  V       R     +    +   +   V     D
Sbjct: 1   MRVLITGGAGFIGSNLARFFLKQGWEVIGFDNLMRRGSFGNLAWLKANREDGGVRFVHGD 60

Query: 58  LSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLS 117
           + +R   E L E +  I        I+ AA    +P+V  +A        TN     ++ 
Sbjct: 61  IRNRNDLEDLFEDIDLI--------IHTAA----QPSVTTSASSPRLDFETNALGTLNVL 108

Query: 118 QLAHPLFKASGNGSIVFISS--VGGVR-----------------------GIP------- 145
           + A    + + N   +F S+  V G                         GI        
Sbjct: 109 EAAR---QHAPNAPFIFTSTNKVYGDLPNYLPLEELETRYELAPEGWSPAGISESFPLDF 165

Query: 146 SVSLYGAYKGAMNQL 160
           S SLYGA KGA +Q 
Sbjct: 166 SHSLYGASKGAADQY 180

CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337

>gnl|CDD|236057 PRK07578, PRK07578, short chain dehydrogenase; Provisional

 Score = 37.1 bits (87), Expect = 0.004
 Identities = 44/190 (23%), Positives = 70/190 (36%), Gaps = 28/190 (14%)

Query: 1   MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSV-CDLS 59
           M  LV G +  IG A V EL++   ++ T  R+                   G V  D++
Sbjct: 1   MKILVIGASGTIGRAVVAELSKRHEVI-TAGRSS------------------GDVQVDIT 41

Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
                  L E V     GK++ +++ A      P  ++T ED +    +      +L  +
Sbjct: 42  DPASIRALFEKV-----GKVDAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLI 96

Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
                  +  GS    S +     IP  +      GA+    K  A E     IR N V+
Sbjct: 97  GQH--YLNDGGSFTLTSGILSDEPIPGGASAATVNGALEGFVKAAALE-LPRGIRINVVS 153

Query: 180 PWVIKTSMIK 189
           P V+  S+ K
Sbjct: 154 PTVLTESLEK 163

Length = 199

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	259
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
KOG0725	270	consensus Reductases with broad range of substrate	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
PRK12747	252	short chain dehydrogenase; Provisional	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK08643	256	acetoin reductase; Validated	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
PRK07035	252	short chain dehydrogenase; Provisional	100.0
PRK07985	294	oxidoreductase; Provisional	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
PRK06172	253	short chain dehydrogenase; Provisional	100.0
PRK06128	300	oxidoreductase; Provisional	100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
PRK08226	263	short chain dehydrogenase; Provisional	100.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	100.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	100.0
PRK12743	256	oxidoreductase; Provisional	100.0
PRK06125	259	short chain dehydrogenase; Provisional	100.0
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	100.0
PRK07067	257	sorbitol dehydrogenase; Provisional	100.0
PLN02253	280	xanthoxin dehydrogenase	100.0
PRK06940	275	short chain dehydrogenase; Provisional	100.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	100.0
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	100.0
PRK07856	252	short chain dehydrogenase; Provisional	100.0
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	100.0
PRK06483	236	dihydromonapterin reductase; Provisional	100.0
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06841	255	short chain dehydrogenase; Provisional	100.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	100.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	100.0
TIGR02415	254	23BDH acetoin reductases. One member of this famil	100.0
PRK07890	258	short chain dehydrogenase; Provisional	100.0
PRK06523	260	short chain dehydrogenase; Provisional	100.0
PRK06949	258	short chain dehydrogenase; Provisional	100.0
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	100.0
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	100.0
PRK06500	249	short chain dehydrogenase; Provisional	100.0
PRK07576	264	short chain dehydrogenase; Provisional	100.0
PRK12939	250	short chain dehydrogenase; Provisional	100.0
PRK07814	263	short chain dehydrogenase; Provisional	100.0
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	100.0
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12824	245	acetoacetyl-CoA reductase; Provisional	100.0
PRK07069	251	short chain dehydrogenase; Validated	100.0
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	100.0
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	100.0
PRK05717	255	oxidoreductase; Validated	100.0
PRK08213	259	gluconate 5-dehydrogenase; Provisional	100.0
PRK08628	258	short chain dehydrogenase; Provisional	100.0
PRK06701	290	short chain dehydrogenase; Provisional	100.0
PRK12742	237	oxidoreductase; Provisional	100.0
PRK06947	248	glucose-1-dehydrogenase; Provisional	100.0
PRK06138	252	short chain dehydrogenase; Provisional	100.0
PRK12937	245	short chain dehydrogenase; Provisional	100.0
PRK08278	273	short chain dehydrogenase; Provisional	100.0
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	100.0
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK06123	248	short chain dehydrogenase; Provisional	100.0
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	100.0
PRK05872	296	short chain dehydrogenase; Provisional	100.0
PRK12744	257	short chain dehydrogenase; Provisional	100.0
PRK12935	247	acetoacetyl-CoA reductase; Provisional	100.0
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05875	276	short chain dehydrogenase; Provisional	100.0
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK07774	250	short chain dehydrogenase; Provisional	100.0
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK09186	256	flagellin modification protein A; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK05884	223	short chain dehydrogenase; Provisional	100.0
PRK06057	255	short chain dehydrogenase; Provisional	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
PRK05599	246	hypothetical protein; Provisional	100.0
PRK06198	260	short chain dehydrogenase; Provisional	100.0
PRK08862	227	short chain dehydrogenase; Provisional	100.0
PRK12746	254	short chain dehydrogenase; Provisional	100.0
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK09134	258	short chain dehydrogenase; Provisional	100.0
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	100.0
PRK12827	249	short chain dehydrogenase; Provisional	100.0
PRK05876	275	short chain dehydrogenase; Provisional	100.0
PRK07074	257	short chain dehydrogenase; Provisional	100.0
PRK07060	245	short chain dehydrogenase; Provisional	100.0
PRK08703	239	short chain dehydrogenase; Provisional	100.0
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PLN00015	308	protochlorophyllide reductase	100.0
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	100.0
PRK07577	234	short chain dehydrogenase; Provisional	100.0
PRK07109	334	short chain dehydrogenase; Provisional	100.0
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	100.0
PRK06182	273	short chain dehydrogenase; Validated	100.0
PRK07832	272	short chain dehydrogenase; Provisional	100.0
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05650	270	short chain dehydrogenase; Provisional	100.0
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	100.0
PRK08263	275	short chain dehydrogenase; Provisional	100.0
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	100.0
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07041	230	short chain dehydrogenase; Provisional	100.0
PRK07454	241	short chain dehydrogenase; Provisional	100.0
PRK07024	257	short chain dehydrogenase; Provisional	100.0
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05993	277	short chain dehydrogenase; Provisional	100.0
PRK07825	273	short chain dehydrogenase; Provisional	100.0
PRK09009	235	C factor cell-cell signaling protein; Provisional	100.0
PRK06180	277	short chain dehydrogenase; Provisional	100.0
PRK12829	264	short chain dehydrogenase; Provisional	100.0
PRK05855	582	short chain dehydrogenase; Validated	100.0
PRK09135	249	pteridine reductase; Provisional	100.0
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	100.0
PRK06924	251	short chain dehydrogenase; Provisional	100.0
PRK10538	248	malonic semialdehyde reductase; Provisional	100.0
PRK08324	681	short chain dehydrogenase; Validated	100.0
PRK06196	315	oxidoreductase; Provisional	100.0
PRK12828	239	short chain dehydrogenase; Provisional	100.0
PRK06914	280	short chain dehydrogenase; Provisional	100.0
PLN02780	320	ketoreductase/ oxidoreductase	100.0
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	100.0
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	100.0
PRK06194	287	hypothetical protein; Provisional	100.0
PRK07775	274	short chain dehydrogenase; Provisional	100.0
PRK05866	293	short chain dehydrogenase; Provisional	100.0
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	100.0
PRK07904	253	short chain dehydrogenase; Provisional	100.0
PRK06179	270	short chain dehydrogenase; Provisional	100.0
PRK08267	260	short chain dehydrogenase; Provisional	100.0
PRK06482	276	short chain dehydrogenase; Provisional	100.0
PRK07806	248	short chain dehydrogenase; Provisional	100.0
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	100.0
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK09072	263	short chain dehydrogenase; Provisional	100.0
COG1028	251	FabG Dehydrogenases with different specificities (	100.0
PRK05854	313	short chain dehydrogenase; Provisional	100.0
PRK06197	306	short chain dehydrogenase; Provisional	100.0
PRK08251	248	short chain dehydrogenase; Provisional	100.0
PRK07578	199	short chain dehydrogenase; Provisional	100.0
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	100.0
PRK07102	243	short chain dehydrogenase; Provisional	100.0
PRK05693	274	short chain dehydrogenase; Provisional	100.0
PRK06181	263	short chain dehydrogenase; Provisional	100.0
PRK07023	243	short chain dehydrogenase; Provisional	100.0
PRK07453	322	protochlorophyllide oxidoreductase; Validated	100.0
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
KOG1611	249	consensus Predicted short chain-type dehydrogenase	100.0
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	100.0
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	100.0
PRK06101	240	short chain dehydrogenase; Provisional	100.0
PRK07326	237	short chain dehydrogenase; Provisional	100.0
PRK07201	657	short chain dehydrogenase; Provisional	100.0
KOG1208	314	consensus Dehydrogenases with different specificit	100.0
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	100.0
PRK09291	257	short chain dehydrogenase; Provisional	100.0
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PRK08017	256	oxidoreductase; Provisional	100.0
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	100.0
PRK08264	238	short chain dehydrogenase; Validated	100.0
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	100.0
PRK08177	225	short chain dehydrogenase; Provisional	100.0
PRK06953	222	short chain dehydrogenase; Provisional	99.98
PRK08219	227	short chain dehydrogenase; Provisional	99.97
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.97
PRK12367	245	short chain dehydrogenase; Provisional	99.97
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.95
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.94
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.94
PLN03209	576	translocon at the inner envelope of chloroplast su	99.93
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.93
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.93
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.92
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.92
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.91
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.91
PLN02650	351	dihydroflavonol-4-reductase	99.9
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.9
PLN02653	340	GDP-mannose 4,6-dehydratase	99.9
PLN02572	442	UDP-sulfoquinovose synthase	99.89
PLN02214	342	cinnamoyl-CoA reductase	99.89
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.89
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.89
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.89
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.89
PLN02583	297	cinnamoyl-CoA reductase	99.89
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.88
PLN00198	338	anthocyanidin reductase; Provisional	99.88
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.88
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.88
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.87
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.87
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.87
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.86
PLN02686	367	cinnamoyl-CoA reductase	99.86
PLN02240	352	UDP-glucose 4-epimerase	99.86
PLN02427	386	UDP-apiose/xylose synthase	99.85
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.85
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.84
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.84
PRK06720	169	hypothetical protein; Provisional	99.84
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.84
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.83
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.83
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.83
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.83
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.82
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.82
PLN02260	668	probable rhamnose biosynthetic enzyme	99.81
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.8
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.8
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.8
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.8
PLN02206	442	UDP-glucuronate decarboxylase	99.79
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.78
CHL00194	317	ycf39 Ycf39; Provisional	99.78
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.76
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.76
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.76
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.75
PRK07201	657	short chain dehydrogenase; Provisional	99.73
PRK05865	854	hypothetical protein; Provisional	99.7
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.69
PLN02996	491	fatty acyl-CoA reductase	99.68
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	99.67
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.66
PLN02778	298	3,5-epimerase/4-reductase	99.63
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.62
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.61
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.59
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.58
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.57
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.57
PRK12320	699	hypothetical protein; Provisional	99.54
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.53
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.53
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.52
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.51
PLN00016	378	RNA-binding protein; Provisional	99.51
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.5
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.49
PLN02503	605	fatty acyl-CoA reductase 2	99.45
PLN02260	668	probable rhamnose biosynthetic enzyme	99.45
PRK08309	177	short chain dehydrogenase; Provisional	99.42
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.34
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.33
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.28
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.21
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.03
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.97
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	98.96
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.91
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	98.89
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.86
COG2910	211	Putative NADH-flavin reductase [General function p	98.83
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.74
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.71
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	98.69
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	98.69
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.62
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.6
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.43
PLN00106	323	malate dehydrogenase	98.42
KOG2774	366	consensus NAD dependent epimerase [General functio	98.42
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.41
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.31
PTZ00325	321	malate dehydrogenase; Provisional	98.28
PRK09620	229	hypothetical protein; Provisional	98.21
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.1
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.08
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	97.99
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.98
PRK14982	340	acyl-ACP reductase; Provisional	97.98
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	97.96
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.93
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.89
PRK05086	312	malate dehydrogenase; Provisional	97.8
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.8
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.7
PRK06849	389	hypothetical protein; Provisional	97.69
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.69
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	97.6
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.58
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	97.57
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.53
PRK15116	268	sulfur acceptor protein CsdL; Provisional	97.52
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.49
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.48
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	97.48
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.47
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.41
COG0569	225	TrkA K+ transport systems, NAD-binding component [	97.41
COG3268	382	Uncharacterized conserved protein [Function unknow	97.37
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.37
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.34
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.34
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	97.25
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	97.24
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.22
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	97.22
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.21
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.16
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.14
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.13
PRK09496	453	trkA potassium transporter peripheral membrane com	97.11
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	97.08
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	97.02
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.01
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	97.0
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.99
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.99
PLN00112	444	malate dehydrogenase (NADP); Provisional	96.98
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	96.97
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	96.97
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	96.95
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.95
PRK04148	134	hypothetical protein; Provisional	96.95
PRK14968	188	putative methyltransferase; Provisional	96.94
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	96.9
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.89
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	96.86
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.84
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.84
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.82
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.8
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	96.77
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.74
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	96.74
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	96.74
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	96.72
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.68
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	96.64
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.64
COG2130	340	Putative NADP-dependent oxidoreductases [General f	96.62
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	96.61
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	96.56
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.55
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	96.55
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	96.54
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	96.53
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.53
PTZ00082	321	L-lactate dehydrogenase; Provisional	96.52
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.51
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.48
PRK05442	326	malate dehydrogenase; Provisional	96.47
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.46
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	96.46
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.46
PRK09496	453	trkA potassium transporter peripheral membrane com	96.42
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.42
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.39
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	96.38
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	96.35
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	96.35
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	96.34
PLN02602	350	lactate dehydrogenase	96.32
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	96.31
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.31
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.31
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.3
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.29
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.28
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	96.27
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.26
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	96.2
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.19
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.18
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.18
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	96.17
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	96.16
PTZ00117	319	malate dehydrogenase; Provisional	96.16
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.15
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.15
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.13
PRK08223	287	hypothetical protein; Validated	96.11
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.1
PLN00203	519	glutamyl-tRNA reductase	96.1
PRK06223	307	malate dehydrogenase; Reviewed	96.09
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	96.04
PRK08655	437	prephenate dehydrogenase; Provisional	96.0
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	95.96
PF12076	164	Wax2_C: WAX2 C-terminal domain; InterPro: IPR02194	95.94
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	95.94
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	95.92
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	95.91
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	95.9
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	95.89
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	95.89
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	95.86
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	95.84
PRK10669	558	putative cation:proton antiport protein; Provision	95.8
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	95.78
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	95.77
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	95.77
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	95.76
KOG4288	283	consensus Predicted oxidoreductase [General functi	95.71
PF13649	101	Methyltransf_25: Methyltransferase domain; PDB: 3B	95.68
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	95.68
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	95.64
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.61
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	95.58
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	95.55
PLN02740	381	Alcohol dehydrogenase-like	95.55
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	95.52
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	95.5
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	95.44
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	95.42
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	95.4
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	95.39
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	95.39
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	95.38
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	95.38
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	95.36
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	95.33
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	95.32
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	95.28
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	95.26
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	95.25
PF00070	80	Pyr_redox: Pyridine nucleotide-disulphide oxidored	95.25
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	95.24
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.22
PRK06035	291	3-hydroxyacyl-CoA dehydrogenase; Validated	95.22
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	95.18
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	95.17
cd01486	307	Apg7 Apg7 is an E1-like protein, that activates tw	95.16
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	95.16
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.15
PRK07411	390	hypothetical protein; Validated	95.14
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	95.14
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	95.13
PRK09599	301	6-phosphogluconate dehydrogenase-like protein; Rev	95.12
PRK07530	292	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.12
PRK00141	473	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.11
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	95.06
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	95.03
PRK14851	679	hypothetical protein; Provisional	95.03
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.0
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	95.0
PLN02827	378	Alcohol dehydrogenase-like	94.99
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	94.93
PLN02586	360	probable cinnamyl alcohol dehydrogenase	94.92
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	94.91
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	94.88
PRK12490	299	6-phosphogluconate dehydrogenase-like protein; Rev	94.88
PLN02178	375	cinnamyl-alcohol dehydrogenase	94.87
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	94.87
PTZ00354	334	alcohol dehydrogenase; Provisional	94.87
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	94.86
TIGR01381	664	E1_like_apg7 E1-like protein-activating enzyme Gsa	94.85
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	94.84
PRK14967	223	putative methyltransferase; Provisional	94.84
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	94.83
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	94.82
KOG2013	603	consensus SMT3/SUMO-activating complex, catalytic	94.82
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	94.81

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=100.00  E-value=2e-51  Score=311.21  Aligned_cols=240  Identities=33%  Similarity=0.440  Sum_probs=221.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |.++||||++|||+++++.|+++|++|++.+++....++....+..++ .-..+.||+++.++++..+++..+.+ ++++
T Consensus        15 k~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~-~h~aF~~DVS~a~~v~~~l~e~~k~~-g~ps   92 (256)
T KOG1200|consen   15 KVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYG-DHSAFSCDVSKAHDVQNTLEEMEKSL-GTPS   92 (256)
T ss_pred             ceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCC-ccceeeeccCcHHHHHHHHHHHHHhc-CCCc
Confidence            678999999999999999999999999999999998888888876544 44566899999999999999999999 6999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhH--hCCCCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFK--ASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      +||||||+....-+..+..++|++.+.+|+.|.|+++|+++..|.  ++++.+|||+||+.+..+.-++..|+++|+++.
T Consensus        93 vlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnYAAsK~GvI  172 (256)
T KOG1200|consen   93 VLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNYAASKGGVI  172 (256)
T ss_pred             EEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchhhhhhcCcee
Confidence            999999998888888899999999999999999999999998854  334559999999999999999999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI  238 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~  238 (259)
                      +|+|++|+|+++++||||.|.||+|.|||...+++.     ..+.+...+|++|++.+||+++.++||+|+.+.|+||+.
T Consensus       173 gftktaArEla~knIrvN~VlPGFI~tpMT~~mp~~-----v~~ki~~~iPmgr~G~~EevA~~V~fLAS~~ssYiTG~t  247 (256)
T KOG1200|consen  173 GFTKTAARELARKNIRVNVVLPGFIATPMTEAMPPK-----VLDKILGMIPMGRLGEAEEVANLVLFLASDASSYITGTT  247 (256)
T ss_pred             eeeHHHHHHHhhcCceEeEeccccccChhhhhcCHH-----HHHHHHccCCccccCCHHHHHHHHHHHhcccccccccee
Confidence            999999999999999999999999999999876543     788999999999999999999999999999999999999


Q ss_pred             EEeCCCcee
Q 024994          239 ICVDGGVTV  247 (259)
Q Consensus       239 l~~dgG~~~  247 (259)
                      +.++||..|
T Consensus       248 ~evtGGl~m  256 (256)
T KOG1200|consen  248 LEVTGGLAM  256 (256)
T ss_pred             EEEeccccC
Confidence            999999764

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-48  Score=325.33  Aligned_cols=247  Identities=30%  Similarity=0.414  Sum_probs=218.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++... +.++.++++|++|.++++++++++. .+ +++
T Consensus         9 k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~-~~-g~i   86 (263)
T PRK08339          9 KLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK-NI-GEP   86 (263)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH-hh-CCC
Confidence            68999999999999999999999999999999999888877776543 4578899999999999999999985 47 689


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      |++|||||.....++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+..+.+....|+++|+++++
T Consensus        87 D~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~~~y~asKaal~~  166 (263)
T PRK08339         87 DIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVRISMAG  166 (263)
T ss_pred             cEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCcchhhHHHHHHHHH
Confidence            99999999877778888999999999999999999999999999988878999999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcC------CCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE------GPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASY  233 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  233 (259)
                      |+++++.|++++|||||+|+||+++|++......      ....+...+.+....|.+|+.+|+|+++++.||+++.+.+
T Consensus       167 l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~s~~~~~  246 (263)
T PRK08339        167 LVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEEIGYLVAFLASDLGSY  246 (263)
T ss_pred             HHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCcccCcCHHHHHHHHHHHhcchhcC
Confidence            9999999999999999999999999998643211      0111223445566789999999999999999999999999


Q ss_pred             ccccEEEeCCCceeee
Q 024994          234 ITGQIICVDGGVTVTV  249 (259)
Q Consensus       234 ~~G~~l~~dgG~~~~~  249 (259)
                      +||+.+.+|||...++
T Consensus       247 itG~~~~vdgG~~~~~  262 (263)
T PRK08339        247 INGAMIPVDGGRLNSV  262 (263)
T ss_pred             ccCceEEECCCccccC
Confidence            9999999999987653

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-47  Score=317.96  Aligned_cols=246  Identities=28%  Similarity=0.409  Sum_probs=220.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHh--cCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKN--KGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+.+++..+++..  .+.++.++++|++|+++++++++++.+.+ ++
T Consensus         8 k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g~   86 (260)
T PRK07063          8 KVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF-GP   86 (260)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh-CC
Confidence            6899999999999999999999999999999999988888888765  45578899999999999999999999999 79


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      +|++|||||.....+..+.+.++|++++++|+.+++.++++++|+|.+++.++||++||..+..+.+++.+|++||++++
T Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~  166 (260)
T PRK07063         87 LDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPVAKHGLL  166 (260)
T ss_pred             CcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCchHHHHHHHHHH
Confidence            99999999987666677788999999999999999999999999998877799999999999999999999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcC-CCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcccc
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE-GPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ  237 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~  237 (259)
                      +|+++++.|++++|||||+|+||+++|++...... .+.............|.+|+.+|+|++++++||+++.+.++||+
T Consensus       167 ~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~va~~~~fl~s~~~~~itG~  246 (260)
T PRK07063        167 GLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEEVAMTAVFLASDEAPFINAT  246 (260)
T ss_pred             HHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccccCCc
Confidence            99999999999999999999999999998754322 11212233445567899999999999999999999999999999


Q ss_pred             EEEeCCCcee
Q 024994          238 IICVDGGVTV  247 (259)
Q Consensus       238 ~l~~dgG~~~  247 (259)
                      .+.+|||.++
T Consensus       247 ~i~vdgg~~~  256 (260)
T PRK07063        247 CITIDGGRSV  256 (260)
T ss_pred             EEEECCCeee
Confidence            9999999775

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-47  Score=317.28  Aligned_cols=240  Identities=28%  Similarity=0.400  Sum_probs=212.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+..  +...++++..+.++.++++|++|+++++++++++.+.+ +++|
T Consensus         9 k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g~iD   85 (251)
T PRK12481          9 KVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVM-GHID   85 (251)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHc-CCCC
Confidence            78999999999999999999999999999998643  23334444446678999999999999999999999998 7899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      ++|||||.....++.+.+.++|++++++|+.+++.++++++|.|.+++ .++||++||..+..+.+....|++||+++++
T Consensus        86 ~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK~a~~~  165 (251)
T PRK12481         86 ILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASKSAVMG  165 (251)
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcchHHHHHHHHH
Confidence            999999988777888899999999999999999999999999997654 5899999999999998889999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      |+++++.|++++|||||+|+||+++|++.......   ....+.+....|.+++.+|+|+++++.||+++.+.+++|+.+
T Consensus       166 l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~---~~~~~~~~~~~p~~~~~~peeva~~~~~L~s~~~~~~~G~~i  242 (251)
T PRK12481        166 LTRALATELSQYNINVNAIAPGYMATDNTAALRAD---TARNEAILERIPASRWGTPDDLAGPAIFLSSSASDYVTGYTL  242 (251)
T ss_pred             HHHHHHHHHhhcCeEEEEEecCCCccCchhhcccC---hHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcCCceE
Confidence            99999999999999999999999999987654321   123345566789999999999999999999999999999999


Q ss_pred             EeCCCce
Q 024994          240 CVDGGVT  246 (259)
Q Consensus       240 ~~dgG~~  246 (259)
                      .+|||..
T Consensus       243 ~vdgg~~  249 (251)
T PRK12481        243 AVDGGWL  249 (251)
T ss_pred             EECCCEe
Confidence            9999964

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=2.1e-47  Score=302.23  Aligned_cols=224  Identities=26%  Similarity=0.358  Sum_probs=203.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+++|||||||||.++|++|+++|++|++++|+.++++++..++.+  ..+..+..|++|.++++++++.+.++| +++|
T Consensus         7 kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~--~~~~~~~~DVtD~~~~~~~i~~~~~~~-g~iD   83 (246)
T COG4221           7 KVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA--GAALALALDVTDRAAVEAAIEALPEEF-GRID   83 (246)
T ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc--CceEEEeeccCCHHHHHHHHHHHHHhh-Cccc
Confidence            6899999999999999999999999999999999999999998865  578999999999999999999999999 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||....+++.+.+.++|++|+++|+.|.++.+++++|.|.+++.|.|||+||+++.+++|+...|+++|+++.+|
T Consensus        84 iLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~ATK~aV~~f  163 (246)
T COG4221          84 ILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAAVRAF  163 (246)
T ss_pred             EEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccchhhHHHHHHH
Confidence            99999999888999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCC
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAA  231 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  231 (259)
                      +..++.|+..++|||..|.||.+.|..+...+...+.+.....    .......+|+|+|+.++|.++...
T Consensus       164 s~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~----y~~~~~l~p~dIA~~V~~~~~~P~  230 (246)
T COG4221         164 SLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKV----YKGGTALTPEDIAEAVLFAATQPQ  230 (246)
T ss_pred             HHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHH----hccCCCCCHHHHHHHHHHHHhCCC
Confidence            9999999999999999999999988888777665432222221    223345689999999999998543

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.3e-47  Score=320.67  Aligned_cols=239  Identities=21%  Similarity=0.284  Sum_probs=205.2

Q ss_pred             CEEEEEcCcc--hHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHH-hcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024994            1 MTALVTGGTR--GIGHATVEELARFGAIVHTCSRNQIELDARLHEWK-NKGFKVTGSVCDLSSREQREKLIETVTSIFQG   77 (259)
Q Consensus         1 k~~lItG~s~--giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (259)
                      |++|||||++  |||+++|++|+++|++|++++|+....+. .+++. +.+ ...++++|++|.++++++++++.+++ +
T Consensus         8 k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~-~~~~~~~~g-~~~~~~~Dv~d~~~v~~~~~~~~~~~-g   84 (271)
T PRK06505          8 KRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKR-VKPLAESLG-SDFVLPCDVEDIASVDAVFEALEKKW-G   84 (271)
T ss_pred             CEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHH-HHHHHHhcC-CceEEeCCCCCHHHHHHHHHHHHHHh-C
Confidence            7899999997  99999999999999999999998654333 23332 223 23578999999999999999999999 7


Q ss_pred             CccEEEEcCCCCCC----CCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhh
Q 024994           78 KLNILINNAAIAFV----KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAY  153 (259)
Q Consensus        78 ~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  153 (259)
                      ++|+||||||....    .++.+.+.++|++++++|+.+++.++++++|+|.+  .|+||++||.++..+.|.+.+|++|
T Consensus        85 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~as  162 (271)
T PRK06505         85 KLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD--GGSMLTLTYGGSTRVMPNYNVMGVA  162 (271)
T ss_pred             CCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc--CceEEEEcCCCccccCCccchhhhh
Confidence            99999999998643    46678899999999999999999999999999973  4899999999998888999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 024994          154 KGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASY  233 (259)
Q Consensus       154 K~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  233 (259)
                      |+|+.+|+|+++.|++++|||||+|+||+++|++......   ............|.+|+.+|+|++++++||+++.+.+
T Consensus       163 KaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~---~~~~~~~~~~~~p~~r~~~peeva~~~~fL~s~~~~~  239 (271)
T PRK06505        163 KAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGD---ARAIFSYQQRNSPLRRTVTIDEVGGSALYLLSDLSSG  239 (271)
T ss_pred             HHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcc---hHHHHHHHhhcCCccccCCHHHHHHHHHHHhCccccc
Confidence            9999999999999999999999999999999998643311   1112334445678999999999999999999999999


Q ss_pred             ccccEEEeCCCcee
Q 024994          234 ITGQIICVDGGVTV  247 (259)
Q Consensus       234 ~~G~~l~~dgG~~~  247 (259)
                      +||+.+.+|||..+
T Consensus       240 itG~~i~vdgG~~~  253 (271)
T PRK06505        240 VTGEIHFVDSGYNI  253 (271)
T ss_pred             cCceEEeecCCccc
Confidence            99999999999764

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.1e-47  Score=318.12  Aligned_cols=238  Identities=24%  Similarity=0.331  Sum_probs=208.6

Q ss_pred             CEEEEEcCc--chHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGT--RGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s--~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||+  +|||+++|++|+++|++|++++|+. +.++..+++.  +.++.++++|++|.++++++++++.+++ ++
T Consensus         8 k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g~   83 (252)
T PRK06079          8 KKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLV--DEEDLLVECDVASDESIERAFATIKERV-GK   83 (252)
T ss_pred             CEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhc--cCceeEEeCCCCCHHHHHHHHHHHHHHh-CC
Confidence            789999999  7999999999999999999999984 3444444442  2367889999999999999999999998 79


Q ss_pred             ccEEEEcCCCCCC----CCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhH
Q 024994           79 LNILINNAAIAFV----KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYK  154 (259)
Q Consensus        79 id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  154 (259)
                      +|++|||||...+    +++.+.+.++|++++++|+.+++.++++++|+|.+  .++||+++|.++..+.+.+..|++||
T Consensus        84 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~~~~~~~Y~asK  161 (252)
T PRK06079         84 IDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP--GASIVTLTYFGSERAIPNYNVMGIAK  161 (252)
T ss_pred             CCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc--CceEEEEeccCccccCCcchhhHHHH
Confidence            9999999998643    57788899999999999999999999999999964  48999999999988889999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 024994          155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYI  234 (259)
Q Consensus       155 ~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~  234 (259)
                      +|+++|+++++.|++++|||||+|+||+++|++......   .+...+.+....|.+|+++|+|+++++.||+++.++++
T Consensus       162 aal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~---~~~~~~~~~~~~p~~r~~~pedva~~~~~l~s~~~~~i  238 (252)
T PRK06079        162 AALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKG---HKDLLKESDSRTVDGVGVTIEEVGNTAAFLLSDLSTGV  238 (252)
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCC---hHHHHHHHHhcCcccCCCCHHHHHHHHHHHhCcccccc
Confidence            999999999999999999999999999999998644321   12244556667889999999999999999999999999


Q ss_pred             cccEEEeCCCcee
Q 024994          235 TGQIICVDGGVTV  247 (259)
Q Consensus       235 ~G~~l~~dgG~~~  247 (259)
                      +|+++.+|||.++
T Consensus       239 tG~~i~vdgg~~~  251 (252)
T PRK06079        239 TGDIIYVDKGVHL  251 (252)
T ss_pred             cccEEEeCCceec
Confidence            9999999999754

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.8e-47  Score=320.29  Aligned_cols=239  Identities=22%  Similarity=0.281  Sum_probs=203.2

Q ss_pred             CEEEEEcCc--chHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHH-hcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024994            1 MTALVTGGT--RGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK-NKGFKVTGSVCDLSSREQREKLIETVTSIFQG   77 (259)
Q Consensus         1 k~~lItG~s--~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (259)
                      |++|||||+  +|||+++|++|+++|++|++++|+.+. ++..+++. ..+.. .++++|++|.++++++++++.+.+ +
T Consensus         6 k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~-~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~~~-g   82 (274)
T PRK08415          6 KKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEAL-KKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKKDL-G   82 (274)
T ss_pred             cEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHH-HHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHHHc-C
Confidence            789999997  899999999999999999999998632 22223332 22333 678999999999999999999998 7


Q ss_pred             CccEEEEcCCCCCC----CCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhh
Q 024994           78 KLNILINNAAIAFV----KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAY  153 (259)
Q Consensus        78 ~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  153 (259)
                      ++|++|||||+...    +++.+.+.++|++++++|+.+++.+++.++|+|.+  .++||++||.++..+.+.+..|++|
T Consensus        83 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~--~g~Iv~isS~~~~~~~~~~~~Y~as  160 (274)
T PRK08415         83 KIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND--GASVLTLSYLGGVKYVPHYNVMGVA  160 (274)
T ss_pred             CCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc--CCcEEEEecCCCccCCCcchhhhhH
Confidence            99999999998642    56788899999999999999999999999999965  4899999999999888999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 024994          154 KGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASY  233 (259)
Q Consensus       154 K~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  233 (259)
                      |+|+.+|+++++.|++++|||||+|+||+++|++.......   ...........|.+|+.+|+|++++++||+++.+.+
T Consensus       161 Kaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~---~~~~~~~~~~~pl~r~~~pedva~~v~fL~s~~~~~  237 (274)
T PRK08415        161 KAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDF---RMILKWNEINAPLKKNVSIEEVGNSGMYLLSDLSSG  237 (274)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchh---hHHhhhhhhhCchhccCCHHHHHHHHHHHhhhhhhc
Confidence            99999999999999999999999999999999875432110   111222234568899999999999999999998999


Q ss_pred             ccccEEEeCCCcee
Q 024994          234 ITGQIICVDGGVTV  247 (259)
Q Consensus       234 ~~G~~l~~dgG~~~  247 (259)
                      +||+.+.+|||..+
T Consensus       238 itG~~i~vdGG~~~  251 (274)
T PRK08415        238 VTGEIHYVDAGYNI  251 (274)
T ss_pred             ccccEEEEcCcccc
Confidence            99999999999764

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4e-47  Score=316.13  Aligned_cols=241  Identities=24%  Similarity=0.305  Sum_probs=206.4

Q ss_pred             CEEEEEcCcc--hHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTR--GIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~--giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||++  |||+++|+.|+++|++|++++|+. ..++..+++.+......++++|++|.++++++++++.+++ ++
T Consensus         9 k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~   86 (260)
T PRK06603          9 KKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKW-GS   86 (260)
T ss_pred             cEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHc-CC
Confidence            6899999998  999999999999999999999884 3334444444321223467899999999999999999999 79


Q ss_pred             ccEEEEcCCCCCC----CCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhH
Q 024994           79 LNILINNAAIAFV----KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYK  154 (259)
Q Consensus        79 id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  154 (259)
                      +|+||||||....    .++.+.+.++|++++++|+.+++.+++.++|+|.+  .|+||++||..+..+.+.+..|++||
T Consensus        87 iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~asK  164 (260)
T PRK06603         87 FDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD--GGSIVTLTYYGAEKVIPNYNVMGVAK  164 (260)
T ss_pred             ccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc--CceEEEEecCccccCCCcccchhhHH
Confidence            9999999997542    46778899999999999999999999999999964  48999999999988889999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 024994          155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYI  234 (259)
Q Consensus       155 ~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~  234 (259)
                      +|+++|+++++.|++++|||||+|+||+++|++......   .+...+......|.+|+.+|+|++++++||+++.+.++
T Consensus       165 aal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~p~~r~~~pedva~~~~~L~s~~~~~i  241 (260)
T PRK06603        165 AALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGD---FSTMLKSHAATAPLKRNTTQEDVGGAAVYLFSELSKGV  241 (260)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCC---cHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCcccccC
Confidence            999999999999999999999999999999997543211   11233445566789999999999999999999999999


Q ss_pred             cccEEEeCCCceee
Q 024994          235 TGQIICVDGGVTVT  248 (259)
Q Consensus       235 ~G~~l~~dgG~~~~  248 (259)
                      ||+.+.+|||+.+.
T Consensus       242 tG~~i~vdgG~~~~  255 (260)
T PRK06603        242 TGEIHYVDCGYNIM  255 (260)
T ss_pred             cceEEEeCCccccc
Confidence            99999999997763

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.4e-47  Score=312.96  Aligned_cols=240  Identities=34%  Similarity=0.509  Sum_probs=214.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||.+++++|+++|++|++++|+.+++++..+++...+.++.++++|++|.++++++++++.+.+ +++|
T Consensus        10 k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id   88 (253)
T PRK05867         10 KRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAEL-GGID   88 (253)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh-CCCC
Confidence            689999999999999999999999999999999998888888877666678899999999999999999999998 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccCCC-C-CChhhhhhHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGI-P-SVSLYGAYKGAM  157 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~~~-~-~~~~Y~~sK~a~  157 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.++++++|+|.+++ .++|+++||..+..+. + .+..|++||+++
T Consensus        89 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~Y~asKaal  168 (253)
T PRK05867         89 IAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKAAV  168 (253)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCccchHHHHHHH
Confidence            999999988777888889999999999999999999999999997654 5799999998776543 3 457899999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcccc
Q 024994          158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ  237 (259)
Q Consensus       158 ~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~  237 (259)
                      ++|+++++.|++++||+||+|+||+++|++.....      ...+.+....|.+|+.+|+|++++++||+++.+.++||+
T Consensus       169 ~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~------~~~~~~~~~~~~~r~~~p~~va~~~~~L~s~~~~~~tG~  242 (253)
T PRK05867        169 IHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYT------EYQPLWEPKIPLGRLGRPEELAGLYLYLASEASSYMTGS  242 (253)
T ss_pred             HHHHHHHHHHHhHhCeEEEEeecCCCCCcccccch------HHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccCCcCCC
Confidence            99999999999999999999999999999875431      123444566789999999999999999999999999999


Q ss_pred             EEEeCCCcee
Q 024994          238 IICVDGGVTV  247 (259)
Q Consensus       238 ~l~~dgG~~~  247 (259)
                      .+.+|||+++
T Consensus       243 ~i~vdgG~~~  252 (253)
T PRK05867        243 DIVIDGGYTC  252 (253)
T ss_pred             eEEECCCccC
Confidence            9999999764

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=6.7e-47  Score=314.43  Aligned_cols=242  Identities=29%  Similarity=0.361  Sum_probs=209.1

Q ss_pred             CEEEEEcCc--chHHHHHHHHHHHCCCEEEEeeCChh--HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024994            1 MTALVTGGT--RGIGHATVEELARFGAIVHTCSRNQI--ELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ   76 (259)
Q Consensus         1 k~~lItG~s--~giG~~~a~~l~~~G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (259)
                      |++|||||+  +|||+++|++|+++|++|+++.|+.+  +.++..+++.+....+.++++|++|.++++++++++.+.+ 
T Consensus         7 k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~-   85 (258)
T PRK07370          7 KKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQKW-   85 (258)
T ss_pred             cEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHHc-
Confidence            689999986  89999999999999999998876543  3344555555444457788999999999999999999999 


Q ss_pred             CCccEEEEcCCCCC----CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhh
Q 024994           77 GKLNILINNAAIAF----VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGA  152 (259)
Q Consensus        77 ~~id~vi~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~  152 (259)
                      +++|++|||||+..    ..++.+.+.++|++++++|+.+++.++++++|.|.+  .++||++||..+..+.+.+..|++
T Consensus        86 g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~Y~a  163 (258)
T PRK07370         86 GKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE--GGSIVTLTYLGGVRAIPNYNVMGV  163 (258)
T ss_pred             CCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh--CCeEEEEeccccccCCcccchhhH
Confidence            79999999999764    256778899999999999999999999999999975  489999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCC
Q 024994          153 YKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAAS  232 (259)
Q Consensus       153 sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  232 (259)
                      ||+|+.+|+++++.|++++||+||+|+||+++|++.......   +...+......|.+|+++|+|+++++.||+++.+.
T Consensus       164 sKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~---~~~~~~~~~~~p~~r~~~~~dva~~~~fl~s~~~~  240 (258)
T PRK07370        164 AKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGI---LDMIHHVEEKAPLRRTVTQTEVGNTAAFLLSDLAS  240 (258)
T ss_pred             HHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccc---hhhhhhhhhcCCcCcCCCHHHHHHHHHHHhChhhc
Confidence            999999999999999999999999999999999976433111   11334455667899999999999999999999999


Q ss_pred             CccccEEEeCCCceee
Q 024994          233 YITGQIICVDGGVTVT  248 (259)
Q Consensus       233 ~~~G~~l~~dgG~~~~  248 (259)
                      ++||+.+.+|||+.++
T Consensus       241 ~~tG~~i~vdgg~~~~  256 (258)
T PRK07370        241 GITGQTIYVDAGYCIM  256 (258)
T ss_pred             cccCcEEEECCccccc
Confidence            9999999999997654

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=7.5e-47  Score=314.66  Aligned_cols=241  Identities=24%  Similarity=0.313  Sum_probs=205.7

Q ss_pred             CEEEEEcC--cchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGG--TRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~--s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||  ++|||+++|+.|+++|++|++++|+. +.++..+++.........+++|++|.++++++++++.+++ ++
T Consensus         7 k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~   84 (261)
T PRK08690          7 KKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHW-DG   84 (261)
T ss_pred             cEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHh-CC
Confidence            68999997  67999999999999999999998864 3334444444332345678999999999999999999999 79


Q ss_pred             ccEEEEcCCCCCCC----C-CCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhh
Q 024994           79 LNILINNAAIAFVK----P-TVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAY  153 (259)
Q Consensus        79 id~vi~~ag~~~~~----~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  153 (259)
                      +|++|||||+....    + +++.+.++|++++++|+.+++.++++++|.|.++ .++||++||..+..+.|++..|++|
T Consensus        85 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~-~g~Iv~iss~~~~~~~~~~~~Y~as  163 (261)
T PRK08690         85 LDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR-NSAIVALSYLGAVRAIPNYNVMGMA  163 (261)
T ss_pred             CcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc-CcEEEEEcccccccCCCCcccchhH
Confidence            99999999986432    2 3467889999999999999999999999999754 5899999999998888999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 024994          154 KGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASY  233 (259)
Q Consensus       154 K~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  233 (259)
                      |+|+.+|+++++.|++++|||||+|+||+++|++.......   ....+.+....|++|+.+|+|+++++.|++++.+.+
T Consensus       164 Kaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~---~~~~~~~~~~~p~~r~~~peevA~~v~~l~s~~~~~  240 (261)
T PRK08690        164 KASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADF---GKLLGHVAAHNPLRRNVTIEEVGNTAAFLLSDLSSG  240 (261)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCch---HHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCcccCC
Confidence            99999999999999999999999999999999986543211   123344556679999999999999999999999999


Q ss_pred             ccccEEEeCCCcee
Q 024994          234 ITGQIICVDGGVTV  247 (259)
Q Consensus       234 ~~G~~l~~dgG~~~  247 (259)
                      +||+++.+|||..+
T Consensus       241 ~tG~~i~vdgG~~~  254 (261)
T PRK08690        241 ITGEITYVDGGYSI  254 (261)
T ss_pred             cceeEEEEcCCccc
Confidence            99999999999765

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=100.00  E-value=2.6e-46  Score=310.15  Aligned_cols=249  Identities=43%  Similarity=0.569  Sum_probs=216.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhc---CCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK---GFKVTGSVCDLSSREQREKLIETVTSIFQG   77 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (259)
                      |++||||+++|||+++|++|++.|++|++++|+.+.+++..+++...   +.++..+.+|++++++++++++...+++.|
T Consensus         9 kvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~~~G   88 (270)
T KOG0725|consen    9 KVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEKFFG   88 (270)
T ss_pred             cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHHhCC
Confidence            79999999999999999999999999999999999999888887754   346999999999999999999999999438


Q ss_pred             CccEEEEcCCCCCCC-CCCCCCHHHHHHHHHHhhH-hHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCC-hhhhhhH
Q 024994           78 KLNILINNAAIAFVK-PTVDITAEDMSTVSSTNFE-SVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSV-SLYGAYK  154 (259)
Q Consensus        78 ~id~vi~~ag~~~~~-~~~~~~~~~~~~~~~~n~~-~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~-~~Y~~sK  154 (259)
                      ++|++|||||..... +..+.+.++|++++++|+. +.+.+.+.+.|++.+.+++.|+++||..+..+.++. .+|+++|
T Consensus        89 kidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~~~~Y~~sK  168 (270)
T KOG0725|consen   89 KIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGSGVAYGVSK  168 (270)
T ss_pred             CCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCcccchhHH
Confidence            999999999998655 7899999999999999999 577777788888888889999999999998876665 7999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHh--hhhcCCCCCCCCHHHHHHHHHHHhCCCCC
Q 024994          155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDG--IARQTPIGRAGEPDEVSSLVAFLCLPAAS  232 (259)
Q Consensus       155 ~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~va~~~~~l~~~~~~  232 (259)
                      +|+++|+|++|.|++++|||||+|+||.+.|++..........+.+.+.  .....|.+|.+.|+|+++.+.||++++..
T Consensus       169 ~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p~gr~g~~~eva~~~~fla~~~as  248 (270)
T KOG0725|consen  169 AALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVPLGRVGTPEEVAEAAAFLASDDAS  248 (270)
T ss_pred             HHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhccccccccCCccCHHHHHHhHHhhcCcccc
Confidence            9999999999999999999999999999999982211111111222332  34566899999999999999999998877


Q ss_pred             CccccEEEeCCCceeee
Q 024994          233 YITGQIICVDGGVTVTV  249 (259)
Q Consensus       233 ~~~G~~l~~dgG~~~~~  249 (259)
                      |++|+.+.+|||.+...
T Consensus       249 yitG~~i~vdgG~~~~~  265 (270)
T KOG0725|consen  249 YITGQTIIVDGGFTVVG  265 (270)
T ss_pred             cccCCEEEEeCCEEeec
Confidence            99999999999998754

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-46  Score=309.72  Aligned_cols=244  Identities=32%  Similarity=0.463  Sum_probs=218.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.++++.+.+++...+.++.++.+|+++.++++++++++.+++ +++|
T Consensus         7 k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id   85 (254)
T PRK07478          7 KVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERF-GGLD   85 (254)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhc-CCCC
Confidence            689999999999999999999999999999999999888888877666788999999999999999999999998 6899


Q ss_pred             EEEEcCCCCC-CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCcc-CCCCCChhhhhhHHHHH
Q 024994           81 ILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV-RGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        81 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~-~~~~~~~~Y~~sK~a~~  158 (259)
                      +||||||... ..++.+.+.++|++++++|+.+++.++++++|.|.+.+.++||++||..+. .+.+++..|++||++++
T Consensus        86 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~~  165 (254)
T PRK07478         86 IAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAASKAGLI  165 (254)
T ss_pred             EEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCCCcchhHHHHHHHH
Confidence            9999999864 357778899999999999999999999999999988878999999998876 57788999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI  238 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~  238 (259)
                      +++++++.|+.++||+||+|+||+++|++.+.....   ...........|.++..+|+|+++.++|++++.+.+++|+.
T Consensus       166 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~  242 (254)
T PRK07478        166 GLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDT---PEALAFVAGLHALKRMAQPEEIAQAALFLASDAASFVTGTA  242 (254)
T ss_pred             HHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCC---HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCCCe
Confidence            999999999999999999999999999987644222   12334445566889999999999999999998889999999


Q ss_pred             EEeCCCceee
Q 024994          239 ICVDGGVTVT  248 (259)
Q Consensus       239 l~~dgG~~~~  248 (259)
                      +.+|||..++
T Consensus       243 ~~~dgg~~~~  252 (254)
T PRK07478        243 LLVDGGVSIT  252 (254)
T ss_pred             EEeCCchhcc
Confidence            9999997653

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=6.9e-46  Score=308.53  Aligned_cols=248  Identities=27%  Similarity=0.354  Sum_probs=215.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+ ++.++++|++|.++++++++++.+.+ +++|
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~~~~~~~~~~~~~-g~id   78 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYG-EVYAVKADLSDKDDLKNLVKEAWELL-GGID   78 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC-CceEEEcCCCCHHHHHHHHHHHHHhc-CCCC
Confidence            689999999999999999999999999999999998888877776543 68889999999999999999999988 7899


Q ss_pred             EEEEcCCCCC--CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHh-CCCCEEEEecCCCccCCCCCChhhhhhHHHH
Q 024994           81 ILINNAAIAF--VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKA-SGNGSIVFISSVGGVRGIPSVSLYGAYKGAM  157 (259)
Q Consensus        81 ~vi~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~  157 (259)
                      +||||||...  ..++.+.+.++|.+.+++|+.+++.+++.++|.|.+ .+.|+||++||..+..+.++...|+++|+++
T Consensus        79 ~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sKaa~  158 (259)
T PRK08340         79 ALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGL  158 (259)
T ss_pred             EEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCchHHHHHHHHH
Confidence            9999999754  345677889999999999999999999999998864 4578999999999998889999999999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcC------CCC-chHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 024994          158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE------GPE-GSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPA  230 (259)
Q Consensus       158 ~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~------~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  230 (259)
                      ++|+|+++.++.++||+||+|+||+++|++......      ... .+...+.+....|.+|+++|+|++++++||+++.
T Consensus       159 ~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~fL~s~~  238 (259)
T PRK08340        159 VQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRWEELGSLIAFLLSEN  238 (259)
T ss_pred             HHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCccCCCCHHHHHHHHHHHcCcc
Confidence            999999999999999999999999999998642110      011 1112344556778999999999999999999999


Q ss_pred             CCCccccEEEeCCCceeeec
Q 024994          231 ASYITGQIICVDGGVTVTVN  250 (259)
Q Consensus       231 ~~~~~G~~l~~dgG~~~~~~  250 (259)
                      ++++||+++.+|||..+.++
T Consensus       239 ~~~itG~~i~vdgg~~~~~~  258 (259)
T PRK08340        239 AEYMLGSTIVFDGAMTRGVN  258 (259)
T ss_pred             cccccCceEeecCCcCCCCC
Confidence            99999999999999776544

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.8e-46  Score=309.94  Aligned_cols=240  Identities=23%  Similarity=0.337  Sum_probs=205.6

Q ss_pred             CEEEEEcCc--chHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGT--RGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s--~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||+  +|||+++|++|+++|++|++++|+.+..+ ..+++.+......++++|++|.++++++++++.+++ ++
T Consensus        11 k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~   88 (258)
T PRK07533         11 KRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARP-YVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEW-GR   88 (258)
T ss_pred             CEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHH-HHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHc-CC
Confidence            789999998  49999999999999999999999865422 222222211235678999999999999999999999 79


Q ss_pred             ccEEEEcCCCCCC----CCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhH
Q 024994           79 LNILINNAAIAFV----KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYK  154 (259)
Q Consensus        79 id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  154 (259)
                      +|++|||||....    +++.+.+.++|++++++|+.+++.+++.++|+|.+  .++||++||..+..+.+.+..|++||
T Consensus        89 ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~--~g~Ii~iss~~~~~~~~~~~~Y~asK  166 (258)
T PRK07533         89 LDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN--GGSLLTMSYYGAEKVVENYNLMGPVK  166 (258)
T ss_pred             CCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc--CCEEEEEeccccccCCccchhhHHHH
Confidence            9999999997642    46778899999999999999999999999999953  58999999999988888999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 024994          155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYI  234 (259)
Q Consensus       155 ~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~  234 (259)
                      +|+.+|+++++.|++++||+||+|+||+++|++.+....   .+...+.+....|.+|+.+|+|+++.++||+++.++++
T Consensus       167 aal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~p~~r~~~p~dva~~~~~L~s~~~~~i  243 (258)
T PRK07533        167 AALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDD---FDALLEDAAERAPLRRLVDIDDVGAVAAFLASDAARRL  243 (258)
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCC---cHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhChhhccc
Confidence            999999999999999999999999999999998754321   12233455567789999999999999999999988999


Q ss_pred             cccEEEeCCCcee
Q 024994          235 TGQIICVDGGVTV  247 (259)
Q Consensus       235 ~G~~l~~dgG~~~  247 (259)
                      +|+.+.+|||..+
T Consensus       244 tG~~i~vdgg~~~  256 (258)
T PRK07533        244 TGNTLYIDGGYHI  256 (258)
T ss_pred             cCcEEeeCCcccc
Confidence            9999999999764

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.7e-46  Score=306.81  Aligned_cols=242  Identities=29%  Similarity=0.366  Sum_probs=214.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChh-HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI-ELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+ .+++..+++...+.++.++++|++|+++++++++++.+.+ +++
T Consensus         9 k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-g~i   87 (254)
T PRK06114          9 QVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAEL-GAL   87 (254)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc-CCC
Confidence            68999999999999999999999999999999764 4566666676656678899999999999999999999988 789


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCC--ChhhhhhHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPS--VSLYGAYKGAM  157 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~--~~~Y~~sK~a~  157 (259)
                      |+||||||.....++.+.+.++|++++++|+.+++.++++++|.|.+++.++||++||..+..+.+.  +..|+++|+++
T Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~sKaa~  167 (254)
T PRK06114         88 TLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYNASKAGV  167 (254)
T ss_pred             CEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCCcchHHHHHHHH
Confidence            9999999998777888899999999999999999999999999998877899999999988876553  68999999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcccc
Q 024994          158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ  237 (259)
Q Consensus       158 ~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~  237 (259)
                      ++++++++.|+.++|||||+|+||+++|++....    ......+.+....|++|+.+|+|+++.++||+++.+.++||+
T Consensus       168 ~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~----~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~~tG~  243 (254)
T PRK06114        168 IHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRP----EMVHQTKLFEEQTPMQRMAKVDEMVGPAVFLLSDAASFCTGV  243 (254)
T ss_pred             HHHHHHHHHHHhhcCeEEEEEeecCccCcccccc----cchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcCCc
Confidence            9999999999999999999999999999986531    111134455667899999999999999999999999999999


Q ss_pred             EEEeCCCcee
Q 024994          238 IICVDGGVTV  247 (259)
Q Consensus       238 ~l~~dgG~~~  247 (259)
                      ++.+|||+..
T Consensus       244 ~i~~dgg~~~  253 (254)
T PRK06114        244 DLLVDGGFVC  253 (254)
T ss_pred             eEEECcCEec
Confidence            9999999753

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=9.6e-46  Score=306.77  Aligned_cols=243  Identities=28%  Similarity=0.469  Sum_probs=221.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++...+.++.++.+|++|.++++++++++.+.+ +++|
T Consensus        10 k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~id   88 (254)
T PRK08085         10 KNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDI-GPID   88 (254)
T ss_pred             CEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhc-CCCC
Confidence            689999999999999999999999999999999988888887777666678889999999999999999999988 7899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      ++|||+|.....++.+.+.++|++++++|+.+++.+++++.++|.+++.++||++||..+..+.++...|+++|++++++
T Consensus        89 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  168 (254)
T PRK08085         89 VLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPYAASKGAVKML  168 (254)
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCCCcchHHHHHHHHHH
Confidence            99999998777788889999999999999999999999999999877779999999999988989999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC  240 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~  240 (259)
                      +++++.|++++||++|+|+||+++|++.......   +...+.+....|.+++++|+|+++++.|++++.++++||+.+.
T Consensus       169 ~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~---~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~  245 (254)
T PRK08085        169 TRGMCVELARHNIQVNGIAPGYFKTEMTKALVED---EAFTAWLCKRTPAARWGDPQELIGAAVFLSSKASDFVNGHLLF  245 (254)
T ss_pred             HHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccC---HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCCEEE
Confidence            9999999999999999999999999987653321   2244556677899999999999999999999999999999999


Q ss_pred             eCCCcee
Q 024994          241 VDGGVTV  247 (259)
Q Consensus       241 ~dgG~~~  247 (259)
                      +|||...
T Consensus       246 ~dgg~~~  252 (254)
T PRK08085        246 VDGGMLV  252 (254)
T ss_pred             ECCCeee
Confidence            9999765

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=9.8e-46  Score=309.77  Aligned_cols=244  Identities=31%  Similarity=0.499  Sum_probs=214.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+ +.+++..+++.+.+.++.++++|+++.++++++++++.+.+ +++|
T Consensus         7 k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g~id   84 (272)
T PRK08589          7 KVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQF-GRVD   84 (272)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHc-CCcC
Confidence            689999999999999999999999999999999 77777777776666678999999999999999999999999 7899


Q ss_pred             EEEEcCCCCC-CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      +||||||... ..++.+.+.++|++++++|+.+++.+++.++|+|.+.+ ++||++||..+..+.+....|++||+++++
T Consensus        85 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKaal~~  163 (272)
T PRK08589         85 VLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAADLYRSGYNAAKGAVIN  163 (272)
T ss_pred             EEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCCCCCchHHHHHHHHHH
Confidence            9999999864 35777889999999999999999999999999998764 899999999999998899999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCc---hHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccc
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEG---SEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG  236 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G  236 (259)
                      |+++++.|+.++||+||+|+||+++|++..........   ..+........|.+++.+|+|+++.++|++++.+.+++|
T Consensus       164 l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G  243 (272)
T PRK08589        164 FTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDSSFITG  243 (272)
T ss_pred             HHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCCCCCCcCHHHHHHHHHHHcCchhcCcCC
Confidence            99999999999999999999999999987654322111   011122233568899999999999999999998999999


Q ss_pred             cEEEeCCCcee
Q 024994          237 QIICVDGGVTV  247 (259)
Q Consensus       237 ~~l~~dgG~~~  247 (259)
                      +.+.+|||...
T Consensus       244 ~~i~vdgg~~~  254 (272)
T PRK08589        244 ETIRIDGGVMA  254 (272)
T ss_pred             CEEEECCCccc
Confidence            99999999754

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.5e-46  Score=309.26  Aligned_cols=239  Identities=24%  Similarity=0.291  Sum_probs=206.1

Q ss_pred             CEEEEEcCc--chHHHHHHHHHHHCCCEEEEeeCCh---hHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Q 024994            1 MTALVTGGT--RGIGHATVEELARFGAIVHTCSRNQ---IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIF   75 (259)
Q Consensus         1 k~~lItG~s--~giG~~~a~~l~~~G~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (259)
                      |++|||||+  +|||+++|++|+++|++|++++|+.   +.++++.+++.  +.++.++++|++|.++++++++++.+++
T Consensus         8 k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   85 (257)
T PRK08594          8 KTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE--GQESLLLPCDVTSDEEITACFETIKEEV   85 (257)
T ss_pred             CEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcC--CCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence            789999997  8999999999999999999998754   33444443332  4578889999999999999999999999


Q ss_pred             CCCccEEEEcCCCCC----CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhh
Q 024994           76 QGKLNILINNAAIAF----VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYG  151 (259)
Q Consensus        76 ~~~id~vi~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~  151 (259)
                       +++|++|||||+..    ..++.+.+.++|++++++|+.+++.++++++|+|.+  .|+||++||..+..+.+.+.+|+
T Consensus        86 -g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~Y~  162 (257)
T PRK08594         86 -GVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE--GGSIVTLTYLGGERVVQNYNVMG  162 (257)
T ss_pred             -CCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc--CceEEEEcccCCccCCCCCchhH
Confidence             79999999999764    246678899999999999999999999999999964  48999999999999989999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCC
Q 024994          152 AYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAA  231 (259)
Q Consensus       152 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  231 (259)
                      +||+|+++|+++++.|++++|||||+|+||+++|++.......   ....+......|.+|..+|+|+++.++|++++.+
T Consensus       163 asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~---~~~~~~~~~~~p~~r~~~p~~va~~~~~l~s~~~  239 (257)
T PRK08594        163 VAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGF---NSILKEIEERAPLRRTTTQEEVGDTAAFLFSDLS  239 (257)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccc---cHHHHHHhhcCCccccCCHHHHHHHHHHHcCccc
Confidence            9999999999999999999999999999999999975432111   1123344556788999999999999999999999


Q ss_pred             CCccccEEEeCCCcee
Q 024994          232 SYITGQIICVDGGVTV  247 (259)
Q Consensus       232 ~~~~G~~l~~dgG~~~  247 (259)
                      +++||+.+.+|||..+
T Consensus       240 ~~~tG~~~~~dgg~~~  255 (257)
T PRK08594        240 RGVTGENIHVDSGYHI  255 (257)
T ss_pred             ccccceEEEECCchhc
Confidence            9999999999999754

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.8e-46  Score=309.18  Aligned_cols=240  Identities=20%  Similarity=0.319  Sum_probs=205.0

Q ss_pred             CEEEEEcCcc--hHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTR--GIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~--giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||++  |||+++|++|+++|++|++++|+. ++++..+++........++++|++|.++++++++++.+.+ ++
T Consensus         7 k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g~   84 (262)
T PRK07984          7 KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVW-PK   84 (262)
T ss_pred             CEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch-hHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhc-CC
Confidence            6899999986  999999999999999999999873 4444455554433456788999999999999999999988 78


Q ss_pred             ccEEEEcCCCCCCCC-----CCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhh
Q 024994           79 LNILINNAAIAFVKP-----TVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAY  153 (259)
Q Consensus        79 id~vi~~ag~~~~~~-----~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  153 (259)
                      +|++|||||+....+     +.+.+.++|++++++|+.+++.+++.+.|.+.+  .++||++||.++..+.+.+.+|++|
T Consensus        85 iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g~Iv~iss~~~~~~~~~~~~Y~as  162 (262)
T PRK07984         85 FDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNYNVMGLA  162 (262)
T ss_pred             CCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcC--CcEEEEEecCCCCCCCCCcchhHHH
Confidence            999999999754322     456789999999999999999999999887643  4899999999998888999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 024994          154 KGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASY  233 (259)
Q Consensus       154 K~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  233 (259)
                      |+|+++|+++++.|++++|||||+|+||+++|++......   .....+......|.+|+.+|+|+++.++||+++.+.+
T Consensus       163 Kaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~---~~~~~~~~~~~~p~~r~~~pedva~~~~~L~s~~~~~  239 (262)
T PRK07984        163 KASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKD---FRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAG  239 (262)
T ss_pred             HHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCc---hHHHHHHHHHcCCCcCCCCHHHHHHHHHHHcCccccc
Confidence            9999999999999999999999999999999987542211   1123344556778999999999999999999998999


Q ss_pred             ccccEEEeCCCcee
Q 024994          234 ITGQIICVDGGVTV  247 (259)
Q Consensus       234 ~~G~~l~~dgG~~~  247 (259)
                      ++|+.+.+|||..+
T Consensus       240 itG~~i~vdgg~~~  253 (262)
T PRK07984        240 ISGEVVHVDGGFSI  253 (262)
T ss_pred             ccCcEEEECCCccc
Confidence            99999999999765

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=7.9e-46  Score=308.33  Aligned_cols=241  Identities=23%  Similarity=0.274  Sum_probs=200.2

Q ss_pred             CEEEEEcC--cchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGG--TRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~--s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||  ++|||+++|++|+++|++|++++|..... +..+++.........+++|++|+++++++++++.+++ ++
T Consensus         7 k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~   84 (260)
T PRK06997          7 KRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFK-DRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHW-DG   84 (260)
T ss_pred             cEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHH-HHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHh-CC
Confidence            68999996  68999999999999999999987643222 2222222211123568899999999999999999999 79


Q ss_pred             ccEEEEcCCCCCCC----C-CCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhh
Q 024994           79 LNILINNAAIAFVK----P-TVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAY  153 (259)
Q Consensus        79 id~vi~~ag~~~~~----~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  153 (259)
                      +|++|||||.....    + +++.+.++|++++++|+.+++.++++++|+|.+  .++||++||..+..+.+.+..|++|
T Consensus        85 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~--~g~Ii~iss~~~~~~~~~~~~Y~as  162 (260)
T PRK06997         85 LDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD--DASLLTLSYLGAERVVPNYNTMGLA  162 (260)
T ss_pred             CcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC--CceEEEEeccccccCCCCcchHHHH
Confidence            99999999986432    2 346788999999999999999999999999943  4899999999998888999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 024994          154 KGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASY  233 (259)
Q Consensus       154 K~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  233 (259)
                      |+|+.+|+++++.|++++|||||+|+||+++|++.......   ....+.+....|.+|.++|+|+++++.||+++.+.+
T Consensus       163 Kaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~---~~~~~~~~~~~p~~r~~~pedva~~~~~l~s~~~~~  239 (260)
T PRK06997        163 KASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDF---GKILDFVESNAPLRRNVTIEEVGNVAAFLLSDLASG  239 (260)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccch---hhHHHHHHhcCcccccCCHHHHHHHHHHHhCccccC
Confidence            99999999999999999999999999999999875432111   123344455678999999999999999999999999


Q ss_pred             ccccEEEeCCCceee
Q 024994          234 ITGQIICVDGGVTVT  248 (259)
Q Consensus       234 ~~G~~l~~dgG~~~~  248 (259)
                      +||+++.+|||...-
T Consensus       240 itG~~i~vdgg~~~~  254 (260)
T PRK06997        240 VTGEITHVDSGFNAV  254 (260)
T ss_pred             cceeEEEEcCChhhc
Confidence            999999999997653

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-45  Score=306.71  Aligned_cols=246  Identities=30%  Similarity=0.445  Sum_probs=216.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||++|||++++++|+++|++|++++|+.++++...+++...  +.++.++++|++|.++++++++++.+.+ ++
T Consensus         9 k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~   87 (265)
T PRK07062          9 RVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARF-GG   87 (265)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhc-CC
Confidence            68999999999999999999999999999999998888777776554  3478889999999999999999999998 78


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      +|+||||||.....++.+.+.++|++.+++|+.+++.+++.++|+|.+.+.++||++||..+..+.+....|+++|+++.
T Consensus        88 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~asKaal~  167 (265)
T PRK07062         88 VDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVATSAARAGLL  167 (265)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCCchHhHHHHHHHH
Confidence            99999999988777888899999999999999999999999999998877899999999999999899999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcC-----CCCchHHHHhh--hhcCCCCCCCCHHHHHHHHHHHhCCCC
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE-----GPEGSEFLDGI--ARQTPIGRAGEPDEVSSLVAFLCLPAA  231 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~-----~~~~~~~~~~~--~~~~~~~~~~~~~~va~~~~~l~~~~~  231 (259)
                      +|+++++.|+.++||+||+|+||+++|++......     ........+.+  ....|.+|+.+|+|++++++||+++.+
T Consensus       168 ~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~~L~s~~~  247 (265)
T PRK07062        168 NLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGRPDEAARALFFLASPLS  247 (265)
T ss_pred             HHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHHhCchh
Confidence            99999999999999999999999999998643211     11111122222  245788999999999999999999888


Q ss_pred             CCccccEEEeCCCcee
Q 024994          232 SYITGQIICVDGGVTV  247 (259)
Q Consensus       232 ~~~~G~~l~~dgG~~~  247 (259)
                      .++||+.+.+|||...
T Consensus       248 ~~~tG~~i~vdgg~~~  263 (265)
T PRK07062        248 SYTTGSHIDVSGGFAR  263 (265)
T ss_pred             cccccceEEEcCceEe
Confidence            9999999999999764

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=9e-46  Score=309.80  Aligned_cols=241  Identities=21%  Similarity=0.270  Sum_probs=203.4

Q ss_pred             CEEEEEcCc--chHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGT--RGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s--~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||+  +|||+++|+.|+++|++|++++|+... .+..+++.+.-....++++|++|.++++++++++.+++ ++
T Consensus        11 k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~-~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g~   88 (272)
T PRK08159         11 KRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDAL-KKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKW-GK   88 (272)
T ss_pred             CEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHH-HHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhc-CC
Confidence            789999997  899999999999999999999887432 22233332221235678999999999999999999998 79


Q ss_pred             ccEEEEcCCCCCC----CCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhH
Q 024994           79 LNILINNAAIAFV----KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYK  154 (259)
Q Consensus        79 id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  154 (259)
                      +|++|||||+...    .++.+.+.++|++++++|+.+++.++++++|+|.+  .|+||++||.++..+.|.+..|++||
T Consensus        89 iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~~p~~~~Y~asK  166 (272)
T PRK08159         89 LDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD--GGSILTLTYYGAEKVMPHYNVMGVAK  166 (272)
T ss_pred             CcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC--CceEEEEeccccccCCCcchhhhhHH
Confidence            9999999998642    46778899999999999999999999999999954  48999999998888889999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 024994          155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYI  234 (259)
Q Consensus       155 ~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~  234 (259)
                      +|+.+|+++++.|+.++|||||+|+||+++|++......   ............|++|..+|+|++++++||+++.+.++
T Consensus       167 aal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~p~~r~~~peevA~~~~~L~s~~~~~i  243 (272)
T PRK08159        167 AALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGD---FRYILKWNEYNAPLRRTVTIEEVGDSALYLLSDLSRGV  243 (272)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCc---chHHHHHHHhCCcccccCCHHHHHHHHHHHhCccccCc
Confidence            999999999999999999999999999999987543211   11112222345788999999999999999999999999


Q ss_pred             cccEEEeCCCceee
Q 024994          235 TGQIICVDGGVTVT  248 (259)
Q Consensus       235 ~G~~l~~dgG~~~~  248 (259)
                      ||+++.+|||+.+.
T Consensus       244 tG~~i~vdgG~~~~  257 (272)
T PRK08159        244 TGEVHHVDSGYHVV  257 (272)
T ss_pred             cceEEEECCCceee
Confidence            99999999998764

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-45  Score=307.15  Aligned_cols=243  Identities=28%  Similarity=0.421  Sum_probs=213.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeC-ChhHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSR-NQIELDARLHEWKNK-GFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||++|||+++++.|+++|++|++++| +.+.++...+++... +.++.++++|++|.++++++++++.+.+ ++
T Consensus         9 k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~   87 (260)
T PRK08416          9 KTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDF-DR   87 (260)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhc-CC
Confidence            78999999999999999999999999998865 566666666666543 5578999999999999999999999998 78


Q ss_pred             ccEEEEcCCCCC------CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhh
Q 024994           79 LNILINNAAIAF------VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGA  152 (259)
Q Consensus        79 id~vi~~ag~~~------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~  152 (259)
                      +|++|||||...      ..++.+.+.+++++++++|+.+++.+++.++|.|.+.+.++||++||..+..+.+.+..|++
T Consensus        88 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  167 (260)
T PRK08416         88 VDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENYAGHGT  167 (260)
T ss_pred             ccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCCCcccchh
Confidence            999999998642      24566778999999999999999999999999998877789999999999888899999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCC
Q 024994          153 YKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAAS  232 (259)
Q Consensus       153 sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  232 (259)
                      ||+++++|+++++.|+.++|||||+|+||+++|++......   .+...+.+....|.+|+.+|+|++++++|++++.+.
T Consensus       168 sK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~---~~~~~~~~~~~~~~~r~~~p~~va~~~~~l~~~~~~  244 (260)
T PRK08416        168 SKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTN---YEEVKAKTEELSPLNRMGQPEDLAGACLFLCSEKAS  244 (260)
T ss_pred             hHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccC---CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhh
Confidence            99999999999999999999999999999999998654422   122445556677899999999999999999998889


Q ss_pred             CccccEEEeCCCcee
Q 024994          233 YITGQIICVDGGVTV  247 (259)
Q Consensus       233 ~~~G~~l~~dgG~~~  247 (259)
                      +++|+.+.+|||..+
T Consensus       245 ~~~G~~i~vdgg~~~  259 (260)
T PRK08416        245 WLTGQTIVVDGGTTF  259 (260)
T ss_pred             cccCcEEEEcCCeec
Confidence            999999999999765

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=6.4e-45  Score=302.52  Aligned_cols=242  Identities=35%  Similarity=0.499  Sum_probs=216.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+ +..++..+.+...+.++.++++|+++.++++++++++.+.+ +++|
T Consensus        16 k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-g~id   93 (258)
T PRK06935         16 KVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEF-GKID   93 (258)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc-CCCC
Confidence            789999999999999999999999999999998 55555555555556678999999999999999999999998 7899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      ++|||+|.....++.+.+.++|++++++|+.+++.+++.++|+|.+++.++||++||..+..+.+.+..|+++|++++++
T Consensus        94 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~  173 (258)
T PRK06935         94 ILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTASKHGVAGL  173 (258)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCchhhHHHHHHHHHH
Confidence            99999998877788888999999999999999999999999999888789999999999998889999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC  240 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~  240 (259)
                      +++++.|+.++||+||.|+||+++|++.......   +...+......|.+++.+|+|+++.+.||+++.+++++|+++.
T Consensus       174 ~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~  250 (258)
T PRK06935        174 TKAFANELAAYNIQVNAIAPGYIKTANTAPIRAD---KNRNDEILKRIPAGRWGEPDDLMGAAVFLASRASDYVNGHILA  250 (258)
T ss_pred             HHHHHHHhhhhCeEEEEEEeccccccchhhcccC---hHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhcCCCCCEEE
Confidence            9999999999999999999999999986543322   1233445567889999999999999999999999999999999


Q ss_pred             eCCCcee
Q 024994          241 VDGGVTV  247 (259)
Q Consensus       241 ~dgG~~~  247 (259)
                      +|||..+
T Consensus       251 ~dgg~~~  257 (258)
T PRK06935        251 VDGGWLV  257 (258)
T ss_pred             ECCCeec
Confidence            9999654

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=6.7e-45  Score=301.86  Aligned_cols=244  Identities=33%  Similarity=0.524  Sum_probs=222.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+++||++++++|+++|++|++++|+.++.+...+++...+.++.++++|++|.++++++++++.+.+ +++|
T Consensus        11 k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~d   89 (255)
T PRK07523         11 RRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEI-GPID   89 (255)
T ss_pred             CEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhc-CCCC
Confidence            789999999999999999999999999999999988887777776656678999999999999999999999988 7899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||+|.....++.+.+.++|++++++|+.+++.+++.+.++|.+++.++||++||..+..+.+++..|+++|++++++
T Consensus        90 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~sK~a~~~~  169 (255)
T PRK07523         90 ILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPGIAPYTATKGAVGNL  169 (255)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCCCccHHHHHHHHHHH
Confidence            99999999877888889999999999999999999999999999887789999999999888889999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC  240 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~  240 (259)
                      +++++.+++++||+||+|+||+++|++.......   +.....+....|.+++..|+|+++++.||+++.+.+++|+.+.
T Consensus       170 ~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~  246 (255)
T PRK07523        170 TKGMATDWAKHGLQCNAIAPGYFDTPLNAALVAD---PEFSAWLEKRTPAGRWGKVEELVGACVFLASDASSFVNGHVLY  246 (255)
T ss_pred             HHHHHHHhhHhCeEEEEEEECcccCchhhhhccC---HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCcEEE
Confidence            9999999999999999999999999987543222   2244566677889999999999999999999888999999999


Q ss_pred             eCCCceee
Q 024994          241 VDGGVTVT  248 (259)
Q Consensus       241 ~dgG~~~~  248 (259)
                      +|||+.++
T Consensus       247 ~~gg~~~~  254 (255)
T PRK07523        247 VDGGITAS  254 (255)
T ss_pred             ECCCeecc
Confidence            99998765

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=7.4e-45  Score=301.35  Aligned_cols=241  Identities=30%  Similarity=0.425  Sum_probs=211.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++||||+++|||++++++|+++|++|++++++..  ++..+++...+.++.++++|++|.++++++++++.+++ +++|
T Consensus        11 k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~~D   87 (253)
T PRK08993         11 KVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEF-GHID   87 (253)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh-CCCC
Confidence            68999999999999999999999999999887543  33344444445578899999999999999999999988 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      ++|||||.....++.+.+.++|++++++|+.+++.++++++|.|.+++ .++||++||..+..+.+....|+++|+|+++
T Consensus        88 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~  167 (253)
T PRK08993         88 ILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMG  167 (253)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCCcchHHHHHHHHH
Confidence            999999987777788889999999999999999999999999997764 5899999999999888889999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      ++++++.|+.++||+||.|+||+++|++.......   ......+....|.+|+.+|+|+++.+.||+++.+.+++|+++
T Consensus       168 ~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~---~~~~~~~~~~~p~~r~~~p~eva~~~~~l~s~~~~~~~G~~~  244 (253)
T PRK08993        168 VTRLMANEWAKHNINVNAIAPGYMATNNTQQLRAD---EQRSAEILDRIPAGRWGLPSDLMGPVVFLASSASDYINGYTI  244 (253)
T ss_pred             HHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccc---hHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCcEE
Confidence            99999999999999999999999999987544221   123334556788999999999999999999999999999999


Q ss_pred             EeCCCcee
Q 024994          240 CVDGGVTV  247 (259)
Q Consensus       240 ~~dgG~~~  247 (259)
                      .+|||...
T Consensus       245 ~~dgg~~~  252 (253)
T PRK08993        245 AVDGGWLA  252 (253)
T ss_pred             EECCCEec
Confidence            99999653

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=2.2e-44  Score=302.44  Aligned_cols=246  Identities=30%  Similarity=0.388  Sum_probs=217.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+..+...+++...+.++.++++|++|.++++++++++.+.+ +++|
T Consensus        11 k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g~id   89 (278)
T PRK08277         11 KVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDF-GPCD   89 (278)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc-CCCC
Confidence            689999999999999999999999999999999988888877776666678999999999999999999999988 7999


Q ss_pred             EEEEcCCCCCC---------------CCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCC
Q 024994           81 ILINNAAIAFV---------------KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIP  145 (259)
Q Consensus        81 ~vi~~ag~~~~---------------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~  145 (259)
                      ++|||||...+               .++.+.+.++|++.+++|+.+++.+++.++|.|.+.+.++||++||..+..+.+
T Consensus        90 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~  169 (278)
T PRK08277         90 ILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTPLT  169 (278)
T ss_pred             EEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcCCCC
Confidence            99999996533               245678899999999999999999999999999887789999999999999999


Q ss_pred             CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCC--CchHHHHhhhhcCCCCCCCCHHHHHHHH
Q 024994          146 SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGP--EGSEFLDGIARQTPIGRAGEPDEVSSLV  223 (259)
Q Consensus       146 ~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~va~~~  223 (259)
                      +...|++||+++++++++++.++.++|||||+|+||+++|++.+......  ......+.+....|.+|+++|+|+++++
T Consensus       170 ~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~  249 (278)
T PRK08277        170 KVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTPMGRFGKPEELLGTL  249 (278)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccCCccCCCCHHHHHHHH
Confidence            99999999999999999999999999999999999999999865432211  1112334555678999999999999999


Q ss_pred             HHHhCC-CCCCccccEEEeCCCcee
Q 024994          224 AFLCLP-AASYITGQIICVDGGVTV  247 (259)
Q Consensus       224 ~~l~~~-~~~~~~G~~l~~dgG~~~  247 (259)
                      +||+++ .+.++||+.+.+|||.+.
T Consensus       250 ~~l~s~~~~~~~tG~~i~vdgG~~~  274 (278)
T PRK08277        250 LWLADEKASSFVTGVVLPVDGGFSA  274 (278)
T ss_pred             HHHcCccccCCcCCCEEEECCCeec
Confidence            999999 889999999999999754

>PRK12747 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-44  Score=298.66  Aligned_cols=241  Identities=30%  Similarity=0.373  Sum_probs=207.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEee-CChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH----c
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCS-RNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSI----F   75 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~----~   75 (259)
                      |++|||||++|||++++++|+++|++|+++. |+.+..++...++...+..+..+++|+++.++++.+++++.+.    +
T Consensus         5 k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~   84 (252)
T PRK12747          5 KVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNRT   84 (252)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhhhc
Confidence            7899999999999999999999999999875 6667777777777665667888899999999999999888763    3


Q ss_pred             C-CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhH
Q 024994           76 Q-GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYK  154 (259)
Q Consensus        76 ~-~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  154 (259)
                      + +++|+||||||+....++.+.+.++|++++++|+.+++.+++.++|.|.+  .++||++||..+..+.++...|++||
T Consensus        85 g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~sK  162 (252)
T PRK12747         85 GSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD--NSRIINISSAATRISLPDFIAYSMTK  162 (252)
T ss_pred             CCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhc--CCeEEEECCcccccCCCCchhHHHHH
Confidence            2 37999999999876667888899999999999999999999999999965  38999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 024994          155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYI  234 (259)
Q Consensus       155 ~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~  234 (259)
                      +++++++++++.|+.++|||||+|+||+++|++.......+.   .........|.+++.+|+|+++++.||+++.+.++
T Consensus       163 aa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  239 (252)
T PRK12747        163 GAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPM---MKQYATTISAFNRLGEVEDIADTAAFLASPDSRWV  239 (252)
T ss_pred             HHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHH---HHHHHHhcCcccCCCCHHHHHHHHHHHcCccccCc
Confidence            999999999999999999999999999999998754322211   12222233478899999999999999999888999


Q ss_pred             cccEEEeCCCce
Q 024994          235 TGQIICVDGGVT  246 (259)
Q Consensus       235 ~G~~l~~dgG~~  246 (259)
                      +|+.+.+|||..
T Consensus       240 ~G~~i~vdgg~~  251 (252)
T PRK12747        240 TGQLIDVSGGSC  251 (252)
T ss_pred             CCcEEEecCCcc
Confidence            999999999965

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-44  Score=304.08  Aligned_cols=237  Identities=25%  Similarity=0.346  Sum_probs=208.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCCh---------hHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ---------IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETV   71 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~---------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   71 (259)
                      |++|||||++|||++++++|+++|++|++++|+.         +.++...+++...+.++.++.+|++|.++++++++++
T Consensus         7 k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~   86 (286)
T PRK07791          7 RVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLVDAA   86 (286)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHH
Confidence            6899999999999999999999999999998876         6677777777666667889999999999999999999


Q ss_pred             HHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC------CCEEEEecCCCccCCCC
Q 024994           72 TSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG------NGSIVFISSVGGVRGIP  145 (259)
Q Consensus        72 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~------~~~ii~isS~~~~~~~~  145 (259)
                      .+.+ +++|++|||||+....++.+.+.++|++++++|+.+++.++++++|+|.+..      .++||++||.++..+.+
T Consensus        87 ~~~~-g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~  165 (286)
T PRK07791         87 VETF-GGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSV  165 (286)
T ss_pred             HHhc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcCCC
Confidence            9998 7999999999987777888899999999999999999999999999997542      37999999999999999


Q ss_pred             CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCC--CCCCHHHHHHHH
Q 024994          146 SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIG--RAGEPDEVSSLV  223 (259)
Q Consensus       146 ~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~va~~~  223 (259)
                      ++..|++||+|+++|+++++.|+.++|||||+|+|| +.|++....         ........+.+  +..+|+|+++++
T Consensus       166 ~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~---------~~~~~~~~~~~~~~~~~pedva~~~  235 (286)
T PRK07791        166 GQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETV---------FAEMMAKPEEGEFDAMAPENVSPLV  235 (286)
T ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhh---------HHHHHhcCcccccCCCCHHHHHHHH
Confidence            999999999999999999999999999999999999 788875321         11222223333  457899999999


Q ss_pred             HHHhCCCCCCccccEEEeCCCceee
Q 024994          224 AFLCLPAASYITGQIICVDGGVTVT  248 (259)
Q Consensus       224 ~~l~~~~~~~~~G~~l~~dgG~~~~  248 (259)
                      +||+++.+.+++|+.+.+|||....
T Consensus       236 ~~L~s~~~~~itG~~i~vdgG~~~~  260 (286)
T PRK07791        236 VWLGSAESRDVTGKVFEVEGGKISV  260 (286)
T ss_pred             HHHhCchhcCCCCcEEEEcCCceEE
Confidence            9999998999999999999998764

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=9.2e-46  Score=304.66  Aligned_cols=234  Identities=41%  Similarity=0.586  Sum_probs=210.5

Q ss_pred             cCc--chHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCccEEEE
Q 024994            7 GGT--RGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILIN   84 (259)
Q Consensus         7 G~s--~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~vi~   84 (259)
                      |++  +|||+++|++|+++|++|++++|+.++++...+++.+... ..++++|++++++++++++++.+.+++++|++||
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~-~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~   79 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYG-AEVIQCDLSDEESVEALFDEAVERFGGRIDILVN   79 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTT-SEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcC-CceEeecCcchHHHHHHHHHHHhhcCCCeEEEEe
Confidence            566  9999999999999999999999999987666666654322 2259999999999999999999998568999999


Q ss_pred             cCCCCCC----CCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           85 NAAIAFV----KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        85 ~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      |+|....    .++.+.+.++|++.+++|+.+++.+++++.|+|.+.  ++||++||..+..+.+++..|+++|+|+++|
T Consensus        80 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--gsii~iss~~~~~~~~~~~~y~~sKaal~~l  157 (241)
T PF13561_consen   80 NAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKG--GSIINISSIAAQRPMPGYSAYSASKAALEGL  157 (241)
T ss_dssp             EEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHE--EEEEEEEEGGGTSBSTTTHHHHHHHHHHHHH
T ss_pred             cccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CCcccccchhhcccCccchhhHHHHHHHHHH
Confidence            9998765    677888999999999999999999999999988775  8999999999999999999999999999999


Q ss_pred             HHHHHHHHcc-CCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          161 TKNLACEWAK-DNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       161 ~~~~a~e~~~-~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      +|+++.|+++ +|||||+|+||++.|++......   .+...+.+....|++|..+|+||+++++||+++.+.++|||+|
T Consensus       158 ~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~---~~~~~~~~~~~~pl~r~~~~~evA~~v~fL~s~~a~~itG~~i  234 (241)
T PF13561_consen  158 TRSLAKELAPKKGIRVNAVSPGPIETPMTERIPG---NEEFLEELKKRIPLGRLGTPEEVANAVLFLASDAASYITGQVI  234 (241)
T ss_dssp             HHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHT---HHHHHHHHHHHSTTSSHBEHHHHHHHHHHHHSGGGTTGTSEEE
T ss_pred             HHHHHHHhccccCeeeeeecccceeccchhcccc---ccchhhhhhhhhccCCCcCHHHHHHHHHHHhCccccCccCCeE
Confidence            9999999999 99999999999999998644322   3447788889999999999999999999999999999999999


Q ss_pred             EeCCCce
Q 024994          240 CVDGGVT  246 (259)
Q Consensus       240 ~~dgG~~  246 (259)
                      .+|||++
T Consensus       235 ~vDGG~s  241 (241)
T PF13561_consen  235 PVDGGFS  241 (241)
T ss_dssp             EESTTGG
T ss_pred             EECCCcC
Confidence            9999975

...

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=3.6e-44  Score=297.57  Aligned_cols=246  Identities=33%  Similarity=0.465  Sum_probs=218.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+..+....++...+.++.++++|+++.++++++++++.+++ +++|
T Consensus         3 k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~id   81 (256)
T PRK08643          3 KVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTF-GDLN   81 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc-CCCC
Confidence            789999999999999999999999999999999988888877776656678899999999999999999999998 7899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.+++.+++.|.+.+ .++||++||..+..+.++...|+++|++++.
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  161 (256)
T PRK08643         82 VVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVRG  161 (256)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCCchhHHHHHHHHH
Confidence            999999987777888889999999999999999999999999997654 5799999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCC------CCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEG------PEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASY  233 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  233 (259)
                      |+++++.|+.++||+||+|+||+++|++.......      .........+....|.+++.+|+|+++.+.||+++.+.+
T Consensus       162 ~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~L~~~~~~~  241 (256)
T PRK08643        162 LTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDVANCVSFLAGPDSDY  241 (256)
T ss_pred             HHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCCCCCCcCHHHHHHHHHHHhCccccC
Confidence            99999999999999999999999999987543211      111112334556678999999999999999999999999


Q ss_pred             ccccEEEeCCCcee
Q 024994          234 ITGQIICVDGGVTV  247 (259)
Q Consensus       234 ~~G~~l~~dgG~~~  247 (259)
                      ++|+.+.+|||.+.
T Consensus       242 ~~G~~i~vdgg~~~  255 (256)
T PRK08643        242 ITGQTIIVDGGMVF  255 (256)
T ss_pred             ccCcEEEeCCCeec
Confidence            99999999999764

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-44  Score=298.69  Aligned_cols=243  Identities=31%  Similarity=0.408  Sum_probs=211.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++++|++|+++++++++++.+.+ +++|
T Consensus         7 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g~id   82 (261)
T PRK08265          7 KVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL---GERARFIATDITDDAAIERAVATVVARF-GRVD   82 (261)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCeeEEEEecCCCHHHHHHHHHHHHHHh-CCCC
Confidence            68999999999999999999999999999999988777766554   4478899999999999999999999998 7899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      ++|||||....... +.+.++|++++++|+.+++.++++++|.|. ++.++||++||..+..+.+.+..|+++|++++++
T Consensus        83 ~lv~~ag~~~~~~~-~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~g~ii~isS~~~~~~~~~~~~Y~asKaa~~~~  160 (261)
T PRK08265         83 ILVNLACTYLDDGL-ASSRADWLAALDVNLVSAAMLAQAAHPHLA-RGGGAIVNFTSISAKFAQTGRWLYPASKAAIRQL  160 (261)
T ss_pred             EEEECCCCCCCCcC-cCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cCCcEEEEECchhhccCCCCCchhHHHHHHHHHH
Confidence            99999997654433 568999999999999999999999999997 5579999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhh-hhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGI-ARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      +++++.|+.++||++|+|+||+++|++......... . ..+.+ ....|.+|+.+|+|++++++|++++.+.+++|+.+
T Consensus       161 ~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~-~-~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~~~~~~tG~~i  238 (261)
T PRK08265        161 TRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDR-A-KADRVAAPFHLLGRVGDPEEVAQVVAFLCSDAASFVTGADY  238 (261)
T ss_pred             HHHHHHHhcccCEEEEEEccCCccChhhhhhcccch-h-HHHHhhcccCCCCCccCHHHHHHHHHHHcCccccCccCcEE
Confidence            999999999999999999999999998755432211 1 12222 23468899999999999999999988999999999


Q ss_pred             EeCCCceeeecc
Q 024994          240 CVDGGVTVTVNV  251 (259)
Q Consensus       240 ~~dgG~~~~~~~  251 (259)
                      .+|||.++..+.
T Consensus       239 ~vdgg~~~~~~~  250 (261)
T PRK08265        239 AVDGGYSALGPE  250 (261)
T ss_pred             EECCCeeccCCC
Confidence            999998876554

>PRK07035 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-44  Score=296.70  Aligned_cols=242  Identities=32%  Similarity=0.410  Sum_probs=218.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+.++.+.+++.+.+..+.++++|+++.++++++++++.+.+ +++|
T Consensus         9 k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id   87 (252)
T PRK07035          9 KIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERH-GRLD   87 (252)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-CCCC
Confidence            689999999999999999999999999999999988888888877666678899999999999999999999998 6899


Q ss_pred             EEEEcCCCCC-CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      ++|||||... ..++.+.+.+++++++++|+.+++.++++++|+|.+.+.++|+++||..+..+.+++..|++||+++++
T Consensus        88 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~al~~  167 (252)
T PRK07035         88 ILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITKAAVIS  167 (252)
T ss_pred             EEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCCCcchHHHHHHHHH
Confidence            9999999753 456778899999999999999999999999999988778999999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      |+++++.++.++||++++|+||+++|++........   ...+......|.++..+|+|+++.++|++++.+.+++|+.+
T Consensus       168 ~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~  244 (252)
T PRK07035        168 MTKAFAKECAPFGIRVNALLPGLTDTKFASALFKND---AILKQALAHIPLRRHAEPSEMAGAVLYLASDASSYTTGECL  244 (252)
T ss_pred             HHHHHHHHHhhcCEEEEEEeeccccCcccccccCCH---HHHHHHHccCCCCCcCCHHHHHHHHHHHhCccccCccCCEE
Confidence            999999999999999999999999999876543322   24555666778999999999999999999999999999999


Q ss_pred             EeCCCce
Q 024994          240 CVDGGVT  246 (259)
Q Consensus       240 ~~dgG~~  246 (259)
                      .+|||.+
T Consensus       245 ~~dgg~~  251 (252)
T PRK07035        245 NVDGGYL  251 (252)
T ss_pred             EeCCCcC
Confidence            9999964

>PRK07985 oxidoreductase; Provisional

Probab=100.00  E-value=2.4e-44  Score=304.36  Aligned_cols=241  Identities=29%  Similarity=0.353  Sum_probs=210.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCCh--hHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ--IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||++|||++++++|+++|++|++++|+.  +..+++.+.+...+.++.++.+|++|.+++.++++++.+.+ ++
T Consensus        50 k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g~  128 (294)
T PRK07985         50 RKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKAL-GG  128 (294)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHh-CC
Confidence            6899999999999999999999999999988653  34455554454446678899999999999999999999988 78


Q ss_pred             ccEEEEcCCCCC-CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHH
Q 024994           79 LNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAM  157 (259)
Q Consensus        79 id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~  157 (259)
                      +|++|||||... ..++.+.+.++|++++++|+.+++.++++++|+|.+  .++||++||..+..+.+.+.+|++||+++
T Consensus       129 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~iv~iSS~~~~~~~~~~~~Y~asKaal  206 (294)
T PRK07985        129 LDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK--GASIITTSSIQAYQPSPHLLDYAATKAAI  206 (294)
T ss_pred             CCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc--CCEEEEECCchhccCCCCcchhHHHHHHH
Confidence            999999999753 456778899999999999999999999999999864  48999999999999989999999999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcccc
Q 024994          158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ  237 (259)
Q Consensus       158 ~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~  237 (259)
                      ++++++++.|++++|||||+|+||+++|++......   .....+.+....|.++..+|+|++++++||+++.+.+++|+
T Consensus       207 ~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~---~~~~~~~~~~~~~~~r~~~pedva~~~~fL~s~~~~~itG~  283 (294)
T PRK07985        207 LNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQ---TQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAE  283 (294)
T ss_pred             HHHHHHHHHHHhHhCcEEEEEECCcCccccccccCC---CHHHHHHHhccCCCCCCCCHHHHHHHHHhhhChhcCCcccc
Confidence            999999999999999999999999999998643211   12234456667889999999999999999999999999999


Q ss_pred             EEEeCCCcee
Q 024994          238 IICVDGGVTV  247 (259)
Q Consensus       238 ~l~~dgG~~~  247 (259)
                      .+.+|||..+
T Consensus       284 ~i~vdgG~~~  293 (294)
T PRK07985        284 VHGVCGGEHL  293 (294)
T ss_pred             EEeeCCCeeC
Confidence            9999999764

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=1.1e-44  Score=305.51  Aligned_cols=242  Identities=24%  Similarity=0.275  Sum_probs=204.5

Q ss_pred             CEEEEEcC--cchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhc----------C---CcEEEEEecC--CC---
Q 024994            1 MTALVTGG--TRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK----------G---FKVTGSVCDL--SS---   60 (259)
Q Consensus         1 k~~lItG~--s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------~---~~~~~~~~D~--~~---   60 (259)
                      |++||||+  |+|||+++|+.|+++|++|++ +|+.++++....++...          +   .....+.+|+  ++   
T Consensus        10 k~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~   88 (303)
T PLN02730         10 KRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDTPED   88 (303)
T ss_pred             CEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCcccc
Confidence            79999999  899999999999999999999 78888887776555421          1   1145778898  33   


Q ss_pred             ---------------HHHHHHHHHHHHHHcCCCccEEEEcCCCCC--CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHH
Q 024994           61 ---------------REQREKLIETVTSIFQGKLNILINNAAIAF--VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPL  123 (259)
Q Consensus        61 ---------------~~~~~~~~~~~~~~~~~~id~vi~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  123 (259)
                                     .++++++++++.+.+ +++|+||||||...  ..++.+.+.++|++++++|+.+++.++++++|.
T Consensus        89 ~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~-G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~p~  167 (303)
T PLN02730         89 VPEDVKTNKRYAGSSNWTVQEVAESVKADF-GSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPI  167 (303)
T ss_pred             CchhhhcccccccCCHHHHHHHHHHHHHHc-CCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                           458999999999999 79999999998643  367888999999999999999999999999999


Q ss_pred             hHhCCCCEEEEecCCCccCCCCCC-hhhhhhHHHHHHHHHHHHHHHcc-CCceEEEEeCCceeCCCCCCCcCCCCchHHH
Q 024994          124 FKASGNGSIVFISSVGGVRGIPSV-SLYGAYKGAMNQLTKNLACEWAK-DNIRTNTVAPWVIKTSMIKPFEEGPEGSEFL  201 (259)
Q Consensus       124 ~~~~~~~~ii~isS~~~~~~~~~~-~~Y~~sK~a~~~~~~~~a~e~~~-~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~  201 (259)
                      |.+.  |+||++||..+..+.|.+ ..|++||+|+++|+++++.|+++ +|||||+|+||+++|++......   .+...
T Consensus       168 m~~~--G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~~---~~~~~  242 (303)
T PLN02730        168 MNPG--GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIGF---IDDMI  242 (303)
T ss_pred             HhcC--CEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhcccc---cHHHH
Confidence            9763  999999999988888765 58999999999999999999986 79999999999999998765311   12233


Q ss_pred             HhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          202 DGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       202 ~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      +......|++|+.+|+|++++++||+++.+.+++|+.+.+|||.....
T Consensus       243 ~~~~~~~pl~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG~~~~g  290 (303)
T PLN02730        243 EYSYANAPLQKELTADEVGNAAAFLASPLASAITGATIYVDNGLNAMG  290 (303)
T ss_pred             HHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCCccccc
Confidence            334455688899999999999999999999999999999999976543

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=1.9e-44  Score=299.74  Aligned_cols=237  Identities=30%  Similarity=0.448  Sum_probs=208.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+..           .++.++++|++|+++++++++++.+.+ +++|
T Consensus         7 k~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~-----------~~~~~~~~D~~~~~~i~~~~~~~~~~~-~~id   74 (258)
T PRK06398          7 KVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY-----------NDVDYFKVDVSNKEQVIKGIDYVISKY-GRID   74 (258)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc-----------CceEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence            7899999999999999999999999999999986432           257889999999999999999999998 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.++++++|+|.+.+.++||++||..+..+.+++..|++||+++++|
T Consensus        75 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaal~~~  154 (258)
T PRK06398         75 ILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHAVLGL  154 (258)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCCchhhhhHHHHHHH
Confidence            99999999877788899999999999999999999999999999887789999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcC---CCCc---hHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE---GPEG---SEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYI  234 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~---~~~~---~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~  234 (259)
                      +++++.|+.+. |+||+|+||+++|++......   ....   ......+....|.++..+|+|++++++||+++.+.++
T Consensus       155 ~~~la~e~~~~-i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l~s~~~~~~  233 (258)
T PRK06398        155 TRSIAVDYAPT-IRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYVVAFLASDLASFI  233 (258)
T ss_pred             HHHHHHHhCCC-CEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCCcCCCcCHHHHHHHHHHHcCcccCCC
Confidence            99999999875 999999999999998754321   0111   1112333456788999999999999999999989999


Q ss_pred             cccEEEeCCCceeeec
Q 024994          235 TGQIICVDGGVTVTVN  250 (259)
Q Consensus       235 ~G~~l~~dgG~~~~~~  250 (259)
                      +|+.+.+|||.+..+.
T Consensus       234 ~G~~i~~dgg~~~~~~  249 (258)
T PRK06398        234 TGECVTVDGGLRALIP  249 (258)
T ss_pred             CCcEEEECCccccCCC
Confidence            9999999999876543

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.6e-44  Score=299.77  Aligned_cols=237  Identities=23%  Similarity=0.218  Sum_probs=200.7

Q ss_pred             CEEEEEcC--cchHHHHHHHHHHHCCCEEEEeeCCh--hHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024994            1 MTALVTGG--TRGIGHATVEELARFGAIVHTCSRNQ--IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ   76 (259)
Q Consensus         1 k~~lItG~--s~giG~~~a~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (259)
                      |++||||+  ++|||++++++|+++|++|++++|+.  +.++++.+++   +.++.++++|++|.++++++++++.+.+ 
T Consensus         8 k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~i~~~~~~~~~~~-   83 (256)
T PRK07889          8 KRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL---PEPAPVLELDVTNEEHLASLADRVREHV-   83 (256)
T ss_pred             CEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc---CCCCcEEeCCCCCHHHHHHHHHHHHHHc-
Confidence            68999999  89999999999999999999999864  3344443333   2357788999999999999999999988 


Q ss_pred             CCccEEEEcCCCCCC----CCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhh
Q 024994           77 GKLNILINNAAIAFV----KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGA  152 (259)
Q Consensus        77 ~~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~  152 (259)
                      +++|++|||||+...    .++.+.+.++|++++++|+.+++.+++.++|+|.+  .++|+++++.. ..+.+.+..|++
T Consensus        84 g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~--~g~Iv~is~~~-~~~~~~~~~Y~a  160 (256)
T PRK07889         84 DGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE--GGSIVGLDFDA-TVAWPAYDWMGV  160 (256)
T ss_pred             CCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc--CceEEEEeecc-cccCCccchhHH
Confidence            799999999998643    35667889999999999999999999999999974  48999998753 455677888999


Q ss_pred             hHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCC-CCCCHHHHHHHHHHHhCCCC
Q 024994          153 YKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIG-RAGEPDEVSSLVAFLCLPAA  231 (259)
Q Consensus       153 sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~va~~~~~l~~~~~  231 (259)
                      ||+++.+|+++++.|++++|||||+|+||+++|++.......   ....+.+....|.+ ++.+|+|+++.++||+++.+
T Consensus       161 sKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~---~~~~~~~~~~~p~~~~~~~p~evA~~v~~l~s~~~  237 (256)
T PRK07889        161 AKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGF---ELLEEGWDERAPLGWDVKDPTPVARAVVALLSDWF  237 (256)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCc---HHHHHHHHhcCccccccCCHHHHHHHHHHHhCccc
Confidence            999999999999999999999999999999999986543211   12334445567877 68999999999999999989


Q ss_pred             CCccccEEEeCCCcee
Q 024994          232 SYITGQIICVDGGVTV  247 (259)
Q Consensus       232 ~~~~G~~l~~dgG~~~  247 (259)
                      .+++|+++.+|||...
T Consensus       238 ~~~tG~~i~vdgg~~~  253 (256)
T PRK07889        238 PATTGEIVHVDGGAHA  253 (256)
T ss_pred             ccccceEEEEcCceec
Confidence            9999999999999753

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=2.6e-44  Score=292.43  Aligned_cols=219  Identities=24%  Similarity=0.323  Sum_probs=199.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++||||||+|||.++|++|+++|++|++++|++++++++.+++++. +..+.++++|+++.+++.++.+++.+.. ..+
T Consensus         7 ~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~-~~I   85 (265)
T COG0300           7 KTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG-GPI   85 (265)
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC-Ccc
Confidence            68999999999999999999999999999999999999999999875 4678999999999999999999998876 589


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      |++|||||+...+++.+.+.++.++++++|+.+++.++++++|.|.+++.|.||||+|.+++.|.|..+.|++||+++..
T Consensus        86 dvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~avY~ATKa~v~~  165 (265)
T COG0300          86 DVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKAFVLS  165 (265)
T ss_pred             cEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCC
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLP  229 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  229 (259)
                      |+++|+.|+.++||+|..++||++.|++......+.         ....+...+.+|+++++..++.+..
T Consensus       166 fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~~~~~~---------~~~~~~~~~~~~~~va~~~~~~l~~  226 (265)
T COG0300         166 FSEALREELKGTGVKVTAVCPGPTRTEFFDAKGSDV---------YLLSPGELVLSPEDVAEAALKALEK  226 (265)
T ss_pred             HHHHHHHHhcCCCeEEEEEecCcccccccccccccc---------ccccchhhccCHHHHHHHHHHHHhc
Confidence            999999999999999999999999999986211111         1122345577899999999888864

>PRK06172 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.3e-44  Score=295.27  Aligned_cols=244  Identities=34%  Similarity=0.496  Sum_probs=220.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||.+++++|+++|++|++++|+.+.++...+++...+.++.++.+|++|.++++++++++.+.+ +++|
T Consensus         8 k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-g~id   86 (253)
T PRK06172          8 KVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAY-GRLD   86 (253)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh-CCCC
Confidence            689999999999999999999999999999999988888777777667789999999999999999999999988 6899


Q ss_pred             EEEEcCCCCCC-CCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAFV-KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      ++|||+|.... .++.+.+.+++++++++|+.+++.++++++|+|.+++.+++|++||..+..+.+++..|+++|+++++
T Consensus        87 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~~~  166 (253)
T PRK06172         87 YAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASKHAVIG  166 (253)
T ss_pred             EEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHHHHHHHHH
Confidence            99999998644 35778899999999999999999999999999987777999999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      |+++++.++.++||+|++|+||+++|++.......  .+.....+....|.++..+|+|+++.++||+++...+++|+.+
T Consensus       167 ~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~p~~ia~~~~~l~~~~~~~~~G~~i  244 (253)
T PRK06172        167 LTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEA--DPRKAEFAAAMHPVGRIGKVEEVASAVLYLCSDGASFTTGHAL  244 (253)
T ss_pred             HHHHHHHHhcccCeEEEEEEeCCccChhhhhhccc--ChHHHHHHhccCCCCCccCHHHHHHHHHHHhCccccCcCCcEE
Confidence            99999999999999999999999999998654331  1234555667788899999999999999999998999999999


Q ss_pred             EeCCCcee
Q 024994          240 CVDGGVTV  247 (259)
Q Consensus       240 ~~dgG~~~  247 (259)
                      .+|||.++
T Consensus       245 ~~dgg~~~  252 (253)
T PRK06172        245 MVDGGATA  252 (253)
T ss_pred             EECCCccC
Confidence            99999854

>PRK06128 oxidoreductase; Provisional

Probab=100.00  E-value=8.5e-44  Score=302.01  Aligned_cols=241  Identities=30%  Similarity=0.392  Sum_probs=211.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChh--HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI--ELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||++|||++++++|+++|++|+++.++.+  ..++..+.+...+.++.++++|++|.++++++++++.+.+ ++
T Consensus        56 k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g~  134 (300)
T PRK06128         56 RKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKEL-GG  134 (300)
T ss_pred             CEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHh-CC
Confidence            68999999999999999999999999999887543  3445555666556678899999999999999999999998 78


Q ss_pred             ccEEEEcCCCCC-CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHH
Q 024994           79 LNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAM  157 (259)
Q Consensus        79 id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~  157 (259)
                      +|+||||||... ..++.+.+.++|++++++|+.+++.++++++|+|.+  .++||++||..+..+.+.+..|++||+++
T Consensus       135 iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~asK~a~  212 (300)
T PRK06128        135 LDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP--GASIINTGSIQSYQPSPTLLDYASTKAAI  212 (300)
T ss_pred             CCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc--CCEEEEECCccccCCCCCchhHHHHHHHH
Confidence            999999999863 456788899999999999999999999999999864  47999999999999999999999999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcccc
Q 024994          158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ  237 (259)
Q Consensus       158 ~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~  237 (259)
                      ++|+++++.++.++||+||+|+||+++|++......   .....+.+....|.+|++.|+|++.+++||+++.+.+++|+
T Consensus       213 ~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~---~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~~~~~~~G~  289 (300)
T PRK06128        213 VAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQ---PPEKIPDFGSETPMKRPGQPVEMAPLYVLLASQESSYVTGE  289 (300)
T ss_pred             HHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCC---CHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCccccCccCc
Confidence            999999999999999999999999999998643211   12244556667899999999999999999999988999999


Q ss_pred             EEEeCCCcee
Q 024994          238 IICVDGGVTV  247 (259)
Q Consensus       238 ~l~~dgG~~~  247 (259)
                      .|.+|||..+
T Consensus       290 ~~~v~gg~~~  299 (300)
T PRK06128        290 VFGVTGGLLL  299 (300)
T ss_pred             EEeeCCCEeC
Confidence            9999999865

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=9.7e-44  Score=294.95  Aligned_cols=241  Identities=33%  Similarity=0.482  Sum_probs=207.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|+++.++.+...+   ++...  ++.++++|++|+++++++++++.+.+ +++|
T Consensus         8 k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~---~l~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~id   81 (255)
T PRK06463          8 KVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAK---ELREK--GVFTIKCDVGNRDQVKKSKEVVEKEF-GRVD   81 (255)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHH---HHHhC--CCeEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence            789999999999999999999999999988776543222   22221  47788999999999999999999988 7899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccC-CCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR-GIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~-~~~~~~~Y~~sK~a~~~  159 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.+++.++|.|.+++.++||++||..+.. +.++...|++||+|+++
T Consensus        82 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~  161 (255)
T PRK06463         82 VLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAITKAGIII  161 (255)
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCCCccHhHHHHHHHHH
Confidence            99999998766778888999999999999999999999999999877789999999988764 44677889999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      |+++++.|+.++||+||.|+||+++|++..............+.+....|.+++.+|+|++++++|++++.+.+++|+.+
T Consensus       162 ~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~~  241 (255)
T PRK06463        162 LTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKTTGKPEDIANIVLFLASDDARYITGQVI  241 (255)
T ss_pred             HHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCCcCCCcCHHHHHHHHHHHcChhhcCCCCCEE
Confidence            99999999999999999999999999987543222222234455667788999999999999999999988899999999


Q ss_pred             EeCCCcee
Q 024994          240 CVDGGVTV  247 (259)
Q Consensus       240 ~~dgG~~~  247 (259)
                      .+|||..-
T Consensus       242 ~~dgg~~~  249 (255)
T PRK06463        242 VADGGRID  249 (255)
T ss_pred             EECCCeee
Confidence            99999753

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-43  Score=292.10  Aligned_cols=244  Identities=28%  Similarity=0.415  Sum_probs=214.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++++|++|+++++++++++.+.+ +++|
T Consensus         2 k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id   80 (252)
T PRK07677          2 KVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKF-GRID   80 (252)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh-CCcc
Confidence            789999999999999999999999999999999988877777776555678999999999999999999999998 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC-CCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      +||||+|.....++.+.+.++|++++++|+.+++.++++++|+|.+. ..++||++||..+..+.+....|++||+++++
T Consensus        81 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sKaa~~~  160 (252)
T PRK07677         81 ALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLA  160 (252)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcchHHHHHHHHH
Confidence            99999997666677889999999999999999999999999998764 35899999999998888888999999999999


Q ss_pred             HHHHHHHHHcc-CCceEEEEeCCceeCCCC-CCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcccc
Q 024994          160 LTKNLACEWAK-DNIRTNTVAPWVIKTSMI-KPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ  237 (259)
Q Consensus       160 ~~~~~a~e~~~-~gi~v~~v~pg~v~t~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~  237 (259)
                      |+++++.|+.+ +||+++.|+||+++|+.. .....   .+...+.+....|++++.+|+|+++++.|++++.+.+++|+
T Consensus       161 ~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~  237 (252)
T PRK07677        161 MTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWE---SEEAAKRTIQSVPLGRLGTPEEIAGLAYFLLSDEAAYINGT  237 (252)
T ss_pred             HHHHHHHHhCcccCeEEEEEeecccccccccccccC---CHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCccccccCCC
Confidence            99999999975 699999999999996532 22111   12345566667788999999999999999999888999999


Q ss_pred             EEEeCCCceee
Q 024994          238 IICVDGGVTVT  248 (259)
Q Consensus       238 ~l~~dgG~~~~  248 (259)
                      .+.+|||..+.
T Consensus       238 ~~~~~gg~~~~  248 (252)
T PRK07677        238 CITMDGGQWLN  248 (252)
T ss_pred             EEEECCCeecC
Confidence            99999997764

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=100.00  E-value=1.7e-43  Score=292.22  Aligned_cols=240  Identities=31%  Similarity=0.457  Sum_probs=210.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||.+++++|+++|++|++++|+..  .+..+.+...+.++.++++|+++.+++.++++++.+.+ +++|
T Consensus         6 k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~d   82 (248)
T TIGR01832         6 KVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEF-GHID   82 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc-CCCC
Confidence            78999999999999999999999999999999753  33444444445678999999999999999999998888 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      ++|||||.....++.+.+.++|++++++|+.+++.++++++|.|.+++ .++||++||..+..+.+....|+++|+++++
T Consensus        83 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~  162 (248)
T TIGR01832        83 ILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKHGVAG  162 (248)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCchhHHHHHHHHH
Confidence            999999998777778889999999999999999999999999997765 6899999999988888889999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      ++++++.++.++||+||+|+||+++|++........   .....+....|.+++.+|+|++++++|++++.+.+++|+++
T Consensus       163 ~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i  239 (248)
T TIGR01832       163 LTKLLANEWAAKGINVNAIAPGYMATNNTQALRADE---DRNAAILERIPAGRWGTPDDIGGPAVFLASSASDYVNGYTL  239 (248)
T ss_pred             HHHHHHHHhCccCcEEEEEEECcCcCcchhccccCh---HHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcCCcEE
Confidence            999999999999999999999999999875432211   12334455678899999999999999999988899999999


Q ss_pred             EeCCCce
Q 024994          240 CVDGGVT  246 (259)
Q Consensus       240 ~~dgG~~  246 (259)
                      .+|||..
T Consensus       240 ~~dgg~~  246 (248)
T TIGR01832       240 AVDGGWL  246 (248)
T ss_pred             EeCCCEe
Confidence            9999965

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.3e-43  Score=292.96  Aligned_cols=236  Identities=32%  Similarity=0.400  Sum_probs=209.7

Q ss_pred             CEEEEEcCc--chHHHHHHHHHHHCCCEEEEeeCC-----------hhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHH
Q 024994            1 MTALVTGGT--RGIGHATVEELARFGAIVHTCSRN-----------QIELDARLHEWKNKGFKVTGSVCDLSSREQREKL   67 (259)
Q Consensus         1 k~~lItG~s--~giG~~~a~~l~~~G~~V~~~~r~-----------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   67 (259)
                      |++|||||+  +|||+++|++|+++|++|++++|+           .+...+..+++...+.++.++++|++|.++++++
T Consensus         7 k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i~~~   86 (256)
T PRK12859          7 KVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAPKEL   86 (256)
T ss_pred             cEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence            689999999  499999999999999999987542           2333445555666677899999999999999999


Q ss_pred             HHHHHHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCC
Q 024994           68 IETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSV  147 (259)
Q Consensus        68 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~  147 (259)
                      ++++.+.+ +++|++|||||.....++.+.+.++|++++++|+.+++.+.+.++|.|.+++.++||++||..+..+.+++
T Consensus        87 ~~~~~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  165 (256)
T PRK12859         87 LNKVTEQL-GYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGPMVGE  165 (256)
T ss_pred             HHHHHHHc-CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCCCCCCc
Confidence            99999988 68999999999877778889999999999999999999999999999987778999999999999999999


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHh
Q 024994          148 SLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLC  227 (259)
Q Consensus       148 ~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  227 (259)
                      ..|+++|+++++|+++++.++.++||+||+|+||+++|++...        ...+.+....|.++..+|+|+++.+.|++
T Consensus       166 ~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~--------~~~~~~~~~~~~~~~~~~~d~a~~~~~l~  237 (256)
T PRK12859        166 LAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTE--------EIKQGLLPMFPFGRIGEPKDAARLIKFLA  237 (256)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCH--------HHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999986431        13344556678889999999999999999


Q ss_pred             CCCCCCccccEEEeCCCc
Q 024994          228 LPAASYITGQIICVDGGV  245 (259)
Q Consensus       228 ~~~~~~~~G~~l~~dgG~  245 (259)
                      ++.+.+++|+++.+|||+
T Consensus       238 s~~~~~~~G~~i~~dgg~  255 (256)
T PRK12859        238 SEEAEWITGQIIHSEGGF  255 (256)
T ss_pred             CccccCccCcEEEeCCCc
Confidence            998999999999999995

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-43  Score=293.32  Aligned_cols=240  Identities=32%  Similarity=0.452  Sum_probs=215.4

Q ss_pred             CEEEEEcCcc-hHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHh-cC-CcEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024994            1 MTALVTGGTR-GIGHATVEELARFGAIVHTCSRNQIELDARLHEWKN-KG-FKVTGSVCDLSSREQREKLIETVTSIFQG   77 (259)
Q Consensus         1 k~~lItG~s~-giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (259)
                      |++|||||+| |||+++++.|+++|++|++++|+.++++...+++.. .+ .++.++++|+++.++++++++++.+.+ +
T Consensus        18 k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g   96 (262)
T PRK07831         18 KVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVERL-G   96 (262)
T ss_pred             CEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence            6899999985 999999999999999999999999888877777654 23 468899999999999999999999988 6


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccCCCCCChhhhhhHHH
Q 024994           78 KLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGA  156 (259)
Q Consensus        78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~~~~~~~~Y~~sK~a  156 (259)
                      ++|+||||||.....++.+.+.++|++++++|+.+++.++++++|.|.... .++|++++|..+..+.+++..|+++|++
T Consensus        97 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sKaa  176 (262)
T PRK07831         97 RLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAAAKAG  176 (262)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCCcchHHHHHH
Confidence            899999999987777888899999999999999999999999999998765 6899999999998888899999999999


Q ss_pred             HHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccc
Q 024994          157 MNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG  236 (259)
Q Consensus       157 ~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G  236 (259)
                      +++|+++++.|+.++||+||+|+||+++|++......    ....+.+....|++|+.+|+|++++++||+++.+.++||
T Consensus       177 l~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~----~~~~~~~~~~~~~~r~~~p~~va~~~~~l~s~~~~~itG  252 (262)
T PRK07831        177 VMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTS----AELLDELAAREAFGRAAEPWEVANVIAFLASDYSSYLTG  252 (262)
T ss_pred             HHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccC----HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCcCC
Confidence            9999999999999999999999999999998754321    224455666778999999999999999999999999999


Q ss_pred             cEEEeCCCc
Q 024994          237 QIICVDGGV  245 (259)
Q Consensus       237 ~~l~~dgG~  245 (259)
                      +++.+|+++
T Consensus       253 ~~i~v~~~~  261 (262)
T PRK07831        253 EVVSVSSQH  261 (262)
T ss_pred             ceEEeCCCC
Confidence            999999975

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-43  Score=295.25  Aligned_cols=241  Identities=31%  Similarity=0.389  Sum_probs=207.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+.++.+.+++   +.++.++++|++|.++++++++++.+.+ +++|
T Consensus         7 k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id   82 (263)
T PRK06200          7 QVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF---GDHVLVVEGDVTSYADNQRAVDQTVDAF-GKLD   82 (263)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHhc-CCCC
Confidence            68999999999999999999999999999999988877665544   3468889999999999999999999988 7899


Q ss_pred             EEEEcCCCCC-CCCCCCCCHHH----HHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHH
Q 024994           81 ILINNAAIAF-VKPTVDITAED----MSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKG  155 (259)
Q Consensus        81 ~vi~~ag~~~-~~~~~~~~~~~----~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~  155 (259)
                      ++|||||+.. ..++.+.+.++    |++++++|+.+++.+++.++|.|.+. .++||+++|..+..+.++...|++||+
T Consensus        83 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~Y~~sK~  161 (263)
T PRK06200         83 CFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS-GGSMIFTLSNSSFYPGGGGPLYTASKH  161 (263)
T ss_pred             EEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc-CCEEEEECChhhcCCCCCCchhHHHHH
Confidence            9999999864 34555666655    89999999999999999999998765 589999999999998888999999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCC------CCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCC
Q 024994          156 AMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEG------PEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLP  229 (259)
Q Consensus       156 a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  229 (259)
                      ++++|+++++.|+++. ||||+|+||+++|++.......      ...+...+.+....|.+|..+|+|++++++||+++
T Consensus       162 a~~~~~~~la~el~~~-Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~fl~s~  240 (263)
T PRK06200        162 AVVGLVRQLAYELAPK-IRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPEDHTGPYVLLASR  240 (263)
T ss_pred             HHHHHHHHHHHHHhcC-cEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCCCCCCCCHHHHhhhhhheecc
Confidence            9999999999999885 9999999999999986432110      01111334556678999999999999999999998


Q ss_pred             C-CCCccccEEEeCCCcee
Q 024994          230 A-ASYITGQIICVDGGVTV  247 (259)
Q Consensus       230 ~-~~~~~G~~l~~dgG~~~  247 (259)
                      . +.++||+.+.+|||+.+
T Consensus       241 ~~~~~itG~~i~vdgG~~~  259 (263)
T PRK06200        241 RNSRALTGVVINADGGLGI  259 (263)
T ss_pred             cccCcccceEEEEcCceee
Confidence            8 89999999999999764

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=4.7e-43  Score=291.13  Aligned_cols=243  Identities=41%  Similarity=0.637  Sum_probs=219.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+.+++..+++...  +.++.++++|+++.++++++++++.+.+ ++
T Consensus        10 k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g~   88 (257)
T PRK09242         10 QTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHW-DG   88 (257)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHc-CC
Confidence            78999999999999999999999999999999998888877777654  5578899999999999999999999998 78


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      +|+||||||.....+..+.+.+++++++++|+.+++.++++++|+|.+++.++||++||..+..+.++...|+++|++++
T Consensus        89 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~  168 (257)
T PRK09242         89 LHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGMTKAALL  168 (257)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCCCcchHHHHHHHH
Confidence            99999999987667778889999999999999999999999999998877799999999999999999999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI  238 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~  238 (259)
                      .++++++.++.++||++|+|+||+++|++.......   +...+.+....|.+++.+|+|++.+++|++++...+++|+.
T Consensus       169 ~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~  245 (257)
T PRK09242        169 QMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSD---PDYYEQVIERTPMRRVGEPEEVAAAVAFLCMPAASYITGQC  245 (257)
T ss_pred             HHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCC---hHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccccccCCE
Confidence            999999999999999999999999999997654332   22445556778899999999999999999998888999999


Q ss_pred             EEeCCCcee
Q 024994          239 ICVDGGVTV  247 (259)
Q Consensus       239 l~~dgG~~~  247 (259)
                      +.+|||...
T Consensus       246 i~~~gg~~~  254 (257)
T PRK09242        246 IAVDGGFLR  254 (257)
T ss_pred             EEECCCeEe
Confidence            999999654

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=5.4e-43  Score=290.54  Aligned_cols=243  Identities=30%  Similarity=0.477  Sum_probs=221.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+++||||+++||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|+++.+++.++++++.+.+ +++|
T Consensus        12 k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~id   90 (256)
T PRK06124         12 QVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEH-GRLD   90 (256)
T ss_pred             CEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc-CCCC
Confidence            789999999999999999999999999999999988888877777666678999999999999999999999988 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      ++|||+|.....++.+.+.++|++++++|+.+++.+++.+++.|.+.+.+++|++||..+..+.+++..|+++|++++++
T Consensus        91 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~  170 (256)
T PRK06124         91 ILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPAAKQGLTGL  170 (256)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCCccHhHHHHHHHHHH
Confidence            99999998777788889999999999999999999999999999887789999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC  240 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~  240 (259)
                      +++++.|+.+.||+++.|+||+++|++.......+   ...+.+....|.+++.+|+|+++++.|++++.+.+++|+.+.
T Consensus       171 ~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~i~  247 (256)
T PRK06124        171 MRALAAEFGPHGITSNAIAPGYFATETNAAMAADP---AVGPWLAQRTPLGRWGRPEEIAGAAVFLASPAASYVNGHVLA  247 (256)
T ss_pred             HHHHHHHHHHhCcEEEEEEECCccCcchhhhccCh---HHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCCcCCCEEE
Confidence            99999999999999999999999999865432222   244556667788999999999999999999999999999999


Q ss_pred             eCCCcee
Q 024994          241 VDGGVTV  247 (259)
Q Consensus       241 ~dgG~~~  247 (259)
                      +|||..+
T Consensus       248 ~dgg~~~  254 (256)
T PRK06124        248 VDGGYSV  254 (256)
T ss_pred             ECCCccc
Confidence            9999764

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=8.2e-43  Score=291.01  Aligned_cols=246  Identities=31%  Similarity=0.519  Sum_probs=220.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++||||++++||++++++|+++|++|++++|+.+++++..+++...+.++.++++|++|.++++++++++.+.+ +++|
T Consensus        11 k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~id   89 (265)
T PRK07097         11 KIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEV-GVID   89 (265)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhC-CCCC
Confidence            689999999999999999999999999999999998888777776666689999999999999999999999988 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.+++.++|+|.+.+.++||++||..+..+.+++..|+++|++++++
T Consensus        90 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaal~~l  169 (265)
T PRK07097         90 ILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKML  169 (265)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCCCccHHHHHHHHHHH
Confidence            99999999877788889999999999999999999999999999887789999999999888989999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcC---CCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcccc
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE---GPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ  237 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~  237 (259)
                      +++++.++.++||+|++|+||+++|++......   ........+......|.+++.+|+|+++.+.|++++.+++++|+
T Consensus       170 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~  249 (265)
T PRK07097        170 TKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDLAGPAVFLASDASNFVNGH  249 (265)
T ss_pred             HHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCCccCCcCHHHHHHHHHHHhCcccCCCCCC
Confidence            999999999999999999999999998754432   11112233444556788899999999999999999888999999


Q ss_pred             EEEeCCCcee
Q 024994          238 IICVDGGVTV  247 (259)
Q Consensus       238 ~l~~dgG~~~  247 (259)
                      .+.+|||...
T Consensus       250 ~~~~~gg~~~  259 (265)
T PRK07097        250 ILYVDGGILA  259 (265)
T ss_pred             EEEECCCcee
Confidence            9999999654

>PRK08226 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.1e-43  Score=291.80  Aligned_cols=246  Identities=30%  Similarity=0.462  Sum_probs=214.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+ ..+..+++...+.++.++++|+++.++++++++++.+.+ +++|
T Consensus         7 ~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-~~id   84 (263)
T PRK08226          7 KTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKE-GRID   84 (263)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc-CCCC
Confidence            68999999999999999999999999999999875 334445554445678899999999999999999999998 7899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCc-cCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG-VRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~-~~~~~~~~~Y~~sK~a~~~  159 (259)
                      +||||||.....++.+.+.+++++++++|+.+++.+++.++|+|.+.+.++||++||..+ ..+.+++..|+++|+++++
T Consensus        85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~sK~a~~~  164 (263)
T PRK08226         85 ILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVG  164 (263)
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCCCcchHHHHHHHHHH
Confidence            999999998777888889999999999999999999999999998776789999999877 4566788999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcC---CCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccc
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE---GPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG  236 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G  236 (259)
                      ++++++.++.++||+|++|+||+++|++.+....   ..........+....|.+++.+|+|+++.+.||+++.+.+++|
T Consensus       165 ~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~~~~~~~~g  244 (263)
T PRK08226        165 LTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELAAFLASDESSYLTG  244 (263)
T ss_pred             HHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCchhcCCcC
Confidence            9999999999999999999999999998754321   1122234555666778999999999999999999988999999


Q ss_pred             cEEEeCCCceee
Q 024994          237 QIICVDGGVTVT  248 (259)
Q Consensus       237 ~~l~~dgG~~~~  248 (259)
                      +++.+|||.++.
T Consensus       245 ~~i~~dgg~~~~  256 (263)
T PRK08226        245 TQNVIDGGSTLP  256 (263)
T ss_pred             ceEeECCCcccC
Confidence            999999997654

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=100.00  E-value=8e-43  Score=289.45  Aligned_cols=241  Identities=32%  Similarity=0.484  Sum_probs=215.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+..+....++...+.++.++.+|++|.+++.++++.+.+.+ +++|
T Consensus        12 k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-~~~d   90 (255)
T PRK06113         12 KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKL-GKVD   90 (255)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence            689999999999999999999999999999999988888777776666678899999999999999999999888 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      ++|||||.....++ +.+.++|++.+++|+.+++.+++++.|+|.+.+.++||++||..+..+.+++..|+++|+++++|
T Consensus        91 ~li~~ag~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  169 (255)
T PRK06113         91 ILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHL  169 (255)
T ss_pred             EEEECCCCCCCCCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCcchhHHHHHHHHHH
Confidence            99999998655554 67899999999999999999999999999877678999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC  240 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~  240 (259)
                      +++++.++.+.||+||.++||+++|++......    +..........|.+++++|+|+++++.|++++.+.+++|+.++
T Consensus       170 ~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~G~~i~  245 (255)
T PRK06113        170 VRNMAFDLGEKNIRVNGIAPGAILTDALKSVIT----PEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQILT  245 (255)
T ss_pred             HHHHHHHhhhhCeEEEEEecccccccccccccC----HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCCEEE
Confidence            999999999999999999999999998764321    1133445566788999999999999999999889999999999


Q ss_pred             eCCCcee
Q 024994          241 VDGGVTV  247 (259)
Q Consensus       241 ~dgG~~~  247 (259)
                      +|||...
T Consensus       246 ~~gg~~~  252 (255)
T PRK06113        246 VSGGGVQ  252 (255)
T ss_pred             ECCCccc
Confidence            9999544

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=8.6e-43  Score=290.22  Aligned_cols=244  Identities=30%  Similarity=0.426  Sum_probs=215.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCCh-hHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ-IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||++|||++++++|+++|++|+++.|+. +..+...+++...+.++.++.+|++|.++++++++++.+.+ +++
T Consensus         8 k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~-g~i   86 (261)
T PRK08936          8 KVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEF-GTL   86 (261)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc-CCC
Confidence            7899999999999999999999999999988854 45556666666556678899999999999999999999988 689


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      |++|||||...+.++.+.+.++|++++++|+.+++.+++.++|+|.+.+ .++||++||..+..+.+++..|+++|++++
T Consensus        87 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~  166 (261)
T PRK08936         87 DVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAASKGGVK  166 (261)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCCcccHHHHHHHH
Confidence            9999999988777888889999999999999999999999999998764 589999999999999999999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI  238 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~  238 (259)
                      +++++++.++.++||+|++|+||+++|++.......   +.....+....|.+++.+++|+++.+.||+++.+++++|+.
T Consensus       167 ~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~  243 (261)
T PRK08936        167 LMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFAD---PKQRADVESMIPMGYIGKPEEIAAVAAWLASSEASYVTGIT  243 (261)
T ss_pred             HHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCC---HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccCCccCcE
Confidence            999999999999999999999999999986532221   12334455677899999999999999999999999999999


Q ss_pred             EEeCCCceee
Q 024994          239 ICVDGGVTVT  248 (259)
Q Consensus       239 l~~dgG~~~~  248 (259)
                      +.+|||..+.
T Consensus       244 i~~d~g~~~~  253 (261)
T PRK08936        244 LFADGGMTLY  253 (261)
T ss_pred             EEECCCcccC
Confidence            9999997753

>PRK12743 oxidoreductase; Provisional

Probab=100.00  E-value=9.5e-43  Score=289.20  Aligned_cols=245  Identities=30%  Similarity=0.417  Sum_probs=216.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeC-ChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSR-NQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||++|||++++++|+++|++|+++.+ +.+..+...+++...+.++.++++|+++.++++++++++.+.+ +++
T Consensus         3 k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~i   81 (256)
T PRK12743          3 QVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRL-GRI   81 (256)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc-CCC
Confidence            68999999999999999999999999998865 5566667777776667789999999999999999999999999 689


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      |+||||+|.....++.+.+.++|++++++|+.+++.+++++.++|.+++ .++||++||..+..+.++...|+++|++++
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~  161 (256)
T PRK12743         82 DVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHALG  161 (256)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCcchhHHHHHHHH
Confidence            9999999987767777889999999999999999999999999997653 589999999999999999999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI  238 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~  238 (259)
                      +++++++.++.++||++|.|+||+++|++.....     ...........|.++..+|+|+++++.|++++.+.+++|++
T Consensus       162 ~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~  236 (256)
T PRK12743        162 GLTKAMALELVEHGILVNAVAPGAIATPMNGMDD-----SDVKPDSRPGIPLGRPGDTHEIASLVAWLCSEGASYTTGQS  236 (256)
T ss_pred             HHHHHHHHHhhhhCeEEEEEEeCCccCccccccC-----hHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCcCCcE
Confidence            9999999999999999999999999999864321     11333445567888999999999999999998889999999


Q ss_pred             EEeCCCceeeecc
Q 024994          239 ICVDGGVTVTVNV  251 (259)
Q Consensus       239 l~~dgG~~~~~~~  251 (259)
                      +.+|||..+.-++
T Consensus       237 ~~~dgg~~~~~~~  249 (256)
T PRK12743        237 LIVDGGFMLANPQ  249 (256)
T ss_pred             EEECCCccccCCc
Confidence            9999998765444

>PRK06125 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.2e-43  Score=291.20  Aligned_cols=243  Identities=28%  Similarity=0.393  Sum_probs=212.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++||||+++|||++++++|+++|++|++++|+.++++...+++... +.++.++++|++|.+++++++++    + +++
T Consensus         8 k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~----~-g~i   82 (259)
T PRK06125          8 KRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAE----A-GDI   82 (259)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHH----h-CCC
Confidence            68999999999999999999999999999999998888777777643 45788999999999999888764    3 689


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      |++|||+|.....++.+.+.++|++++++|+.+++.++++++|.|.+++.++||++||..+..+.+.+..|+++|+++++
T Consensus        83 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~ask~al~~  162 (259)
T PRK06125         83 DILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYICGSAGNAALMA  162 (259)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCCchHhHHHHHHHHH
Confidence            99999999887778889999999999999999999999999999988777899999999998888888999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcC-----CCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE-----GPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYI  234 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~  234 (259)
                      ++++++.|+.++|||||+|+||+++|++......     ..........+....|.+++.+|+|++++++||+++.+.++
T Consensus       163 ~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~  242 (259)
T PRK06125        163 FTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVADLVAFLASPRSGYT  242 (259)
T ss_pred             HHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCCcCCCcCHHHHHHHHHHHcCchhccc
Confidence            9999999999999999999999999997532211     00111233445566788999999999999999999889999


Q ss_pred             cccEEEeCCCceee
Q 024994          235 TGQIICVDGGVTVT  248 (259)
Q Consensus       235 ~G~~l~~dgG~~~~  248 (259)
                      +|+.+.+|||....
T Consensus       243 ~G~~i~vdgg~~~~  256 (259)
T PRK06125        243 SGTVVTVDGGISAR  256 (259)
T ss_pred             cCceEEecCCeeec
Confidence            99999999997653

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-42  Score=289.31  Aligned_cols=242  Identities=27%  Similarity=0.360  Sum_probs=206.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.. .++..+++...+.++.++++|++|.++++++++++.+.+ +++|
T Consensus         9 k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id   86 (260)
T PRK12823          9 KVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAF-GRID   86 (260)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHc-CCCe
Confidence            68999999999999999999999999999999853 445555665556678899999999999999999999988 6899


Q ss_pred             EEEEcCCCCC-CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      +||||||... ..++.+.+.++|++.+++|+.+++.+++.++|+|.+.+.++||++||..+..  +...+|++||+++++
T Consensus        87 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--~~~~~Y~~sK~a~~~  164 (260)
T PRK12823         87 VLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRG--INRVPYSAAKGGVNA  164 (260)
T ss_pred             EEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccC--CCCCccHHHHHHHHH
Confidence            9999999653 4677888999999999999999999999999999887778999999987642  355789999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCc------C--CCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCC
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE------E--GPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAA  231 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~------~--~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  231 (259)
                      |+++++.+++++||+||+|+||+++|++.....      .  ..........+....|++++++|+|++++++|++++.+
T Consensus       165 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  244 (260)
T PRK12823        165 LTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTIDEQVAAILFLASDEA  244 (260)
T ss_pred             HHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcccCCCHHHHHHHHHHHcCccc
Confidence            999999999999999999999999998632110      0  01112234445567889999999999999999999988


Q ss_pred             CCccccEEEeCCCce
Q 024994          232 SYITGQIICVDGGVT  246 (259)
Q Consensus       232 ~~~~G~~l~~dgG~~  246 (259)
                      .+++|+.+++|||..
T Consensus       245 ~~~~g~~~~v~gg~~  259 (260)
T PRK12823        245 SYITGTVLPVGGGDL  259 (260)
T ss_pred             ccccCcEEeecCCCC
Confidence            999999999999863

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=100.00  E-value=9.7e-43  Score=289.23  Aligned_cols=244  Identities=28%  Similarity=0.412  Sum_probs=214.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||.+++++|+++|++|++++|+.+..++..+++   ..++.++++|++|.++++++++++.+.+ +++|
T Consensus         7 ~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id   82 (257)
T PRK07067          7 KVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI---GPAAIAVSLDVTRQDSIDRIVAAAVERF-GGID   82 (257)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence            68999999999999999999999999999999998877765554   3368889999999999999999999988 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      ++|||||.....++.+.+.+++++++++|+.+++.+++++++.|.+++ .++||++||..+..+.++...|++||+++++
T Consensus        83 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  162 (257)
T PRK07067         83 ILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKAAVIS  162 (257)
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCCchhhhhHHHHHH
Confidence            999999988777888889999999999999999999999999987653 5799999999988999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcC------CCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE------GPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASY  233 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  233 (259)
                      ++++++.|+.++||++|.|+||+++|++......      ..........+.+..|.+++.+|+|+++++.|++++.+.+
T Consensus       163 ~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  242 (257)
T PRK07067        163 YTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMALFLASADADY  242 (257)
T ss_pred             HHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHHHHHHHhCccccc
Confidence            9999999999999999999999999998643210      0111123344556778999999999999999999998899


Q ss_pred             ccccEEEeCCCceee
Q 024994          234 ITGQIICVDGGVTVT  248 (259)
Q Consensus       234 ~~G~~l~~dgG~~~~  248 (259)
                      ++|+++++|||..++
T Consensus       243 ~~g~~~~v~gg~~~~  257 (257)
T PRK07067        243 IVAQTYNVDGGNWMS  257 (257)
T ss_pred             ccCcEEeecCCEeCC
Confidence            999999999997653

>PLN02253 xanthoxin dehydrogenase

Probab=100.00  E-value=2.4e-42  Score=290.33  Aligned_cols=245  Identities=27%  Similarity=0.346  Sum_probs=208.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+..++..+++.. +.++.++++|++|.++++++++++.+.+ +++|
T Consensus        19 k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~~-g~id   96 (280)
T PLN02253         19 KVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGG-EPNVCFFHCDVTVEDDVSRAVDFTVDKF-GTLD   96 (280)
T ss_pred             CEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC-CCceEEEEeecCCHHHHHHHHHHHHHHh-CCCC
Confidence            6899999999999999999999999999999998877766666532 4478899999999999999999999998 7899


Q ss_pred             EEEEcCCCCCC--CCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           81 ILINNAAIAFV--KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        81 ~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      +||||||....  .++.+.+.++|++++++|+.+++.++++++|.|.+.+.+++++++|..+..+.++...|++||++++
T Consensus        97 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~  176 (280)
T PLN02253         97 IMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTGSKHAVL  176 (280)
T ss_pred             EEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCCCcccHHHHHHHH
Confidence            99999998643  3577889999999999999999999999999998777799999999999888888889999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCc-hHHH----HhhhhcCCC-CCCCCHHHHHHHHHHHhCCCCC
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEG-SEFL----DGIARQTPI-GRAGEPDEVSSLVAFLCLPAAS  232 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~-~~~~----~~~~~~~~~-~~~~~~~~va~~~~~l~~~~~~  232 (259)
                      +++++++.|+.++||+||+++||+++|++.......... ....    .......+. ++..+|+|+++++.|++++.+.
T Consensus       177 ~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~dva~~~~~l~s~~~~  256 (280)
T PLN02253        177 GLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVDDVANAVLFLASDEAR  256 (280)
T ss_pred             HHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCCcCCCCCHHHHHHHHHhhcCcccc
Confidence            999999999999999999999999999976432221110 1111    111222333 5667999999999999999899


Q ss_pred             CccccEEEeCCCcee
Q 024994          233 YITGQIICVDGGVTV  247 (259)
Q Consensus       233 ~~~G~~l~~dgG~~~  247 (259)
                      +++|+.+.+|||...
T Consensus       257 ~i~G~~i~vdgG~~~  271 (280)
T PLN02253        257 YISGLNLMIDGGFTC  271 (280)
T ss_pred             cccCcEEEECCchhh
Confidence            999999999999764

>PRK06940 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-42  Score=289.71  Aligned_cols=234  Identities=27%  Similarity=0.400  Sum_probs=198.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++||||+ ||||++++++|+ +|++|++++|+.+++++..+++...+.++.++++|++|.++++++++++ +.+ +++|
T Consensus         3 k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~~-g~id   78 (275)
T PRK06940          3 EVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QTL-GPVT   78 (275)
T ss_pred             CEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-Hhc-CCCC
Confidence            68999998 699999999996 8999999999988887777777665667889999999999999999988 556 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCC----------------
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI----------------  144 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~----------------  144 (259)
                      +||||||+..       ..++|++++++|+.+++.+++.+.|.|.++  +++|+++|..+..+.                
T Consensus        79 ~li~nAG~~~-------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~--g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~  149 (275)
T PRK06940         79 GLVHTAGVSP-------SQASPEAILKVDLYGTALVLEEFGKVIAPG--GAGVVIASQSGHRLPALTAEQERALATTPTE  149 (275)
T ss_pred             EEEECCCcCC-------chhhHHHHHHHhhHHHHHHHHHHHHHHhhC--CCEEEEEecccccCcccchhhhccccccccc
Confidence            9999999742       236799999999999999999999999653  788999998876542                


Q ss_pred             --------------CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCC
Q 024994          145 --------------PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPI  210 (259)
Q Consensus       145 --------------~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  210 (259)
                                    +++..|++||+|+++++++++.|+.++|||||+|+||+++|++......... ....+......|.
T Consensus       150 ~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~p~  228 (275)
T PRK06940        150 ELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPR-GDGYRNMFAKSPA  228 (275)
T ss_pred             cccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCc-hHHHHHHhhhCCc
Confidence                          2467899999999999999999999999999999999999998643221111 1123445566789


Q ss_pred             CCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCceee
Q 024994          211 GRAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVT  248 (259)
Q Consensus       211 ~~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~  248 (259)
                      +|+.+|+|++++++||+++.++++||+.+.+|||....
T Consensus       229 ~r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg~~~~  266 (275)
T PRK06940        229 GRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGGATAS  266 (275)
T ss_pred             ccCCCHHHHHHHHHHHcCcccCcccCceEEEcCCeEEE
Confidence            99999999999999999999999999999999997653

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=100.00  E-value=6.8e-43  Score=291.02  Aligned_cols=243  Identities=30%  Similarity=0.369  Sum_probs=203.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+.++++...   .+.++.++++|++|.++++++++++.+.+ +++|
T Consensus         6 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id   81 (262)
T TIGR03325         6 EVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAA---HGDAVVGVEGDVRSLDDHKEAVARCVAAF-GKID   81 (262)
T ss_pred             cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh---cCCceEEEEeccCCHHHHHHHHHHHHHHh-CCCC
Confidence            6899999999999999999999999999999998776665432   24468889999999999999999999998 7999


Q ss_pred             EEEEcCCCCCC-CCCCCCCH----HHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHH
Q 024994           81 ILINNAAIAFV-KPTVDITA----EDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKG  155 (259)
Q Consensus        81 ~vi~~ag~~~~-~~~~~~~~----~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~  155 (259)
                      +||||||.... .++.+.+.    ++|++++++|+.+++.++++++|.|.+. .+++|+++|..+..+.+....|++||+
T Consensus        82 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~Y~~sKa  160 (262)
T TIGR03325        82 CLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVAS-RGSVIFTISNAGFYPNGGGPLYTAAKH  160 (262)
T ss_pred             EEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhc-CCCEEEEeccceecCCCCCchhHHHHH
Confidence            99999997532 34434333    5799999999999999999999999765 489999999999998888899999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCC--CC---chHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 024994          156 AMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEG--PE---GSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPA  230 (259)
Q Consensus       156 a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  230 (259)
                      ++++|+++++.|++++ ||||+|+||+++|++.......  ..   .....+......|.+|+.+|+|++++++|++++.
T Consensus       161 a~~~l~~~la~e~~~~-irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l~s~~  239 (262)
T TIGR03325       161 AVVGLVKELAFELAPY-VRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEYTGAYVFFATRG  239 (262)
T ss_pred             HHHHHHHHHHHhhccC-eEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCCCCCCCChHHhhhheeeeecCC
Confidence            9999999999999987 9999999999999986532110  00   0012233445678999999999999999999974


Q ss_pred             -CCCccccEEEeCCCceeee
Q 024994          231 -ASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       231 -~~~~~G~~l~~dgG~~~~~  249 (259)
                       +.++||+.+.+|||..+..
T Consensus       240 ~~~~~tG~~i~vdgg~~~~~  259 (262)
T TIGR03325       240 DTVPATGAVLNYDGGMGVRG  259 (262)
T ss_pred             CcccccceEEEecCCeeecc
Confidence             5789999999999987644

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-42  Score=286.45  Aligned_cols=246  Identities=26%  Similarity=0.291  Sum_probs=215.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG--FKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||+++||.+++++|+++|++|++++|+.+.++...+++....  .++.++.+|++|.+++.++++++.+.+ ++
T Consensus         3 k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-~~   81 (259)
T PRK12384          3 QVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIF-GR   81 (259)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHc-CC
Confidence            689999999999999999999999999999999888877766665432  468899999999999999999999998 68


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccCCCCCChhhhhhHHHH
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAM  157 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~~~~~~~~Y~~sK~a~  157 (259)
                      +|++|||||.....++.+.+.++|++++++|+.+++.++++++|.|.+++ .+++|++||..+..+.+....|++||+++
T Consensus        82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKaa~  161 (259)
T PRK12384         82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGG  161 (259)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCCchhHHHHHHH
Confidence            99999999988777888899999999999999999999999999998765 68999999998888888889999999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEeCCce-eCCCCCCCcC------CCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 024994          158 NQLTKNLACEWAKDNIRTNTVAPWVI-KTSMIKPFEE------GPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPA  230 (259)
Q Consensus       158 ~~~~~~~a~e~~~~gi~v~~v~pg~v-~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  230 (259)
                      ++++++++.|++++||+|+.++||++ .|++.....+      ....+...+.+....|.+++.+++|++++++|++++.
T Consensus       162 ~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~l~~~~  241 (259)
T PRK12384        162 VGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLLFYASPK  241 (259)
T ss_pred             HHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHHHHHHHHHcCcc
Confidence            99999999999999999999999975 6665543211      1112234445566789999999999999999999988


Q ss_pred             CCCccccEEEeCCCcee
Q 024994          231 ASYITGQIICVDGGVTV  247 (259)
Q Consensus       231 ~~~~~G~~l~~dgG~~~  247 (259)
                      +.+++|+.+++|||+.+
T Consensus       242 ~~~~~G~~~~v~~g~~~  258 (259)
T PRK12384        242 ASYCTGQSINVTGGQVM  258 (259)
T ss_pred             cccccCceEEEcCCEEe
Confidence            88999999999999865

>PRK07856 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-42  Score=286.51  Aligned_cols=238  Identities=29%  Similarity=0.445  Sum_probs=210.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+.        ...+.++.++++|+++.++++++++++.+.+ +++|
T Consensus         7 k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id   77 (252)
T PRK07856          7 RVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--------TVDGRPAEFHAADVRDPDQVAALVDAIVERH-GRLD   77 (252)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--------hhcCCceEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence            689999999999999999999999999999998765        1124468899999999999999999999988 7899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC-CCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      +||||||.....+..+.+.++|++++++|+.+++.+++.+.|.|.++ ..++||++||..+..+.+++..|+++|+++++
T Consensus        78 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  157 (252)
T PRK07856         78 VLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKAGLLN  157 (252)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCchhHHHHHHHHH
Confidence            99999998777777888999999999999999999999999999864 45899999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      |+++++.|+.++ |++|.|+||+++|++.......   ......+....|.++..+|+|+++.++||+++.+.+++|+.|
T Consensus       158 l~~~la~e~~~~-i~v~~i~Pg~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~p~~va~~~~~L~~~~~~~i~G~~i  233 (252)
T PRK07856        158 LTRSLAVEWAPK-VRVNAVVVGLVRTEQSELHYGD---AEGIAAVAATVPLGRLATPADIAWACLFLASDLASYVSGANL  233 (252)
T ss_pred             HHHHHHHHhcCC-eEEEEEEeccccChHHhhhccC---HHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCcccCCccCCEE
Confidence            999999999887 9999999999999986543221   123445566778999999999999999999988899999999


Q ss_pred             EeCCCceeeecc
Q 024994          240 CVDGGVTVTVNV  251 (259)
Q Consensus       240 ~~dgG~~~~~~~  251 (259)
                      .+|||...+.-+
T Consensus       234 ~vdgg~~~~~~~  245 (252)
T PRK07856        234 EVHGGGERPAFL  245 (252)
T ss_pred             EECCCcchHHHH
Confidence            999998776543

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=8.1e-45  Score=270.71  Aligned_cols=236  Identities=33%  Similarity=0.385  Sum_probs=214.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      +.+++||+.-|||+++++.|++.|++|+.+.|+++.+..+.+++.   .-+..+..|+++++.+.+.+..+     +++|
T Consensus         8 ~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p---~~I~Pi~~Dls~wea~~~~l~~v-----~pid   79 (245)
T KOG1207|consen    8 VIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETP---SLIIPIVGDLSAWEALFKLLVPV-----FPID   79 (245)
T ss_pred             eEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCC---cceeeeEecccHHHHHHHhhccc-----Cchh
Confidence            578999999999999999999999999999999999988887753   34778889999988877776544     5899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHh-HhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLF-KASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      .++||||+.-..|+.+.+.++|++.|++|+.+++.+.|...+-+ .+..+|.|+++||.++.++..++..|+++|+|+++
T Consensus        80 gLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nHtvYcatKaALDm  159 (245)
T KOG1207|consen   80 GLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNHTVYCATKAALDM  159 (245)
T ss_pred             hhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCceEEeecHHHHHH
Confidence            99999999988899999999999999999999999999865444 44557899999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      ++|+++.|+++++||||++.|-.+.|.|.+.-+.+++   ....+...+|++|+...+|+.++++||+|+.+.+.||.++
T Consensus       160 lTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~---K~k~mL~riPl~rFaEV~eVVnA~lfLLSd~ssmttGstl  236 (245)
T KOG1207|consen  160 LTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPD---KKKKMLDRIPLKRFAEVDEVVNAVLFLLSDNSSMTTGSTL  236 (245)
T ss_pred             HHHHHHHhhCcceeEeeccCCeEEEecccccccCCch---hccchhhhCchhhhhHHHHHHhhheeeeecCcCcccCcee
Confidence            9999999999999999999999999999988777776   6677889999999999999999999999999999999999


Q ss_pred             EeCCCcee
Q 024994          240 CVDGGVTV  247 (259)
Q Consensus       240 ~~dgG~~~  247 (259)
                      .++||++.
T Consensus       237 pveGGfs~  244 (245)
T KOG1207|consen  237 PVEGGFSN  244 (245)
T ss_pred             eecCCccC
Confidence            99999874

>PRK06483 dihydromonapterin reductase; Provisional

Probab=100.00  E-value=4.7e-42  Score=281.63  Aligned_cols=231  Identities=20%  Similarity=0.261  Sum_probs=199.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+...+   ++...  .+.++.+|++|.++++++++++.+.+ +++|
T Consensus         3 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~---~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id   76 (236)
T PRK06483          3 APILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAID---GLRQA--GAQCIQADFSTNAGIMAFIDELKQHT-DGLR   76 (236)
T ss_pred             ceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHH---HHHHc--CCEEEEcCCCCHHHHHHHHHHHHhhC-CCcc
Confidence            689999999999999999999999999999998765432   22222  36788999999999999999999988 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC--CCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG--NGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      ++|||||........+.+.++|++++++|+.+++.+++.++|.|.+.+  .++||++||..+..+.+++..|++||++++
T Consensus        77 ~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~asKaal~  156 (236)
T PRK06483         77 AIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASKAALD  156 (236)
T ss_pred             EEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCccHHHHHHHHH
Confidence            999999986655566778999999999999999999999999998765  589999999998888889999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI  238 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~  238 (259)
                      +|+++++.|+++ +||||+|+||++.|+...       .+...+......|.++...|+|+++.+.||++  +.++||+.
T Consensus       157 ~l~~~~a~e~~~-~irvn~v~Pg~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~--~~~~~G~~  226 (236)
T PRK06483        157 NMTLSFAAKLAP-EVKVNSIAPALILFNEGD-------DAAYRQKALAKSLLKIEPGEEEIIDLVDYLLT--SCYVTGRS  226 (236)
T ss_pred             HHHHHHHHHHCC-CcEEEEEccCceecCCCC-------CHHHHHHHhccCccccCCCHHHHHHHHHHHhc--CCCcCCcE
Confidence            999999999987 599999999999775321       11233444556788999999999999999996  67999999


Q ss_pred             EEeCCCcee
Q 024994          239 ICVDGGVTV  247 (259)
Q Consensus       239 l~~dgG~~~  247 (259)
                      +.+|||..+
T Consensus       227 i~vdgg~~~  235 (236)
T PRK06483        227 LPVDGGRHL  235 (236)
T ss_pred             EEeCccccc
Confidence            999999765

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.1e-42  Score=284.94  Aligned_cols=190  Identities=32%  Similarity=0.380  Sum_probs=176.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhc-CC-cEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GF-KVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |+|+|||||+|||+++|++|+++|++++++.|..+.++...+++.+. .. +++.+++|++|.+++.++++++.++| |+
T Consensus        13 kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~f-g~   91 (282)
T KOG1205|consen   13 KVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHF-GR   91 (282)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhc-CC
Confidence            79999999999999999999999999999999999999887887754 23 59999999999999999999999999 79


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      +|+||||||+.......+.+.+++..+|++|++|++.++++++|+|++++.|+||++||++|..+.|....|++||+|++
T Consensus        92 vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~~~Y~ASK~Al~  171 (282)
T KOG1205|consen   92 VDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFRSIYSASKHALE  171 (282)
T ss_pred             CCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcccccchHHHHHH
Confidence            99999999998877778889999999999999999999999999999987899999999999999999999999999999


Q ss_pred             HHHHHHHHHHccCC--ceEEEEeCCceeCCCCCCCc
Q 024994          159 QLTKNLACEWAKDN--IRTNTVAPWVIKTSMIKPFE  192 (259)
Q Consensus       159 ~~~~~~a~e~~~~g--i~v~~v~pg~v~t~~~~~~~  192 (259)
                      +|..+|+.|+.+.+  |++ .|+||+|+|++.....
T Consensus       172 ~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~~~  206 (282)
T KOG1205|consen  172 GFFETLRQELIPLGTIIII-LVSPGPIETEFTGKEL  206 (282)
T ss_pred             HHHHHHHHHhhccCceEEE-EEecCceeecccchhh
Confidence            99999999999877  566 9999999999876543

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=2.3e-42  Score=313.99  Aligned_cols=242  Identities=34%  Similarity=0.565  Sum_probs=213.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||+++|++|+++|++|++++|+.++++.+.+++   +.++..+++|++|.++++++++++.+.+ +++|
T Consensus       270 k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id  345 (520)
T PRK06484        270 RVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL---GDEHLSVQADITDEAAVESAFAQIQARW-GRLD  345 (520)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence            78999999999999999999999999999999988887766544   4467788999999999999999999999 7999


Q ss_pred             EEEEcCCCCC-CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      +||||||... ..++.+.+.++|++++++|+.+++.+++.++|+|  .+.++||++||..+..+.+++..|++||+++++
T Consensus       346 ~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~--~~~g~iv~isS~~~~~~~~~~~~Y~asKaal~~  423 (520)
T PRK06484        346 VLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLM--SQGGVIVNLGSIASLLALPPRNAYCASKAAVTM  423 (520)
T ss_pred             EEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHh--ccCCEEEEECchhhcCCCCCCchhHHHHHHHHH
Confidence            9999999863 3577788999999999999999999999999999  345899999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      |+++++.|+.++|||||+|+||+++|++.......  .....+.+....|.+++.+|+|++++++||+++.+.+++|+.+
T Consensus       424 l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~s~~~~~~~G~~i  501 (520)
T PRK06484        424 LSRSLACEWAPAGIRVNTVAPGYIETPAVLALKAS--GRADFDSIRRRIPLGRLGDPEEVAEAIAFLASPAASYVNGATL  501 (520)
T ss_pred             HHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccc--cHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCcEE
Confidence            99999999999999999999999999987543211  1123344556778999999999999999999988899999999


Q ss_pred             EeCCCceeeec
Q 024994          240 CVDGGVTVTVN  250 (259)
Q Consensus       240 ~~dgG~~~~~~  250 (259)
                      .+|||......
T Consensus       502 ~vdgg~~~~~~  512 (520)
T PRK06484        502 TVDGGWTAFGD  512 (520)
T ss_pred             EECCCccCCCC
Confidence            99999754443

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-42  Score=293.96  Aligned_cols=237  Identities=23%  Similarity=0.243  Sum_probs=195.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCCh----------hHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ----------IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIET   70 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~----------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   70 (259)
                      |++|||||++|||+++|++|+++|++|++++|+.          +.+++..+++...+.++.++++|++|.+++++++++
T Consensus         9 k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~   88 (305)
T PRK08303          9 KVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALVER   88 (305)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH
Confidence            7899999999999999999999999999999984          345555666655566788899999999999999999


Q ss_pred             HHHHcCCCccEEEEcC-CCCC----CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccC---
Q 024994           71 VTSIFQGKLNILINNA-AIAF----VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR---  142 (259)
Q Consensus        71 ~~~~~~~~id~vi~~a-g~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~---  142 (259)
                      +.+.+ +++|++|||| |...    ..++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+..   
T Consensus        89 ~~~~~-g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~~~~  167 (305)
T PRK08303         89 IDREQ-GRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEYNAT  167 (305)
T ss_pred             HHHHc-CCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccccccCc
Confidence            99999 7999999999 7531    2567778899999999999999999999999999877679999999976643   


Q ss_pred             CCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCC-CCCCCCHHHHHH
Q 024994          143 GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTP-IGRAGEPDEVSS  221 (259)
Q Consensus       143 ~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~va~  221 (259)
                      +.+....|++||+|+.+|+++++.|++++|||||+|+||+++|++......... ....+. ....| .++..+|+|+++
T Consensus       168 ~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~-~~~~~~-~~~~p~~~~~~~peevA~  245 (305)
T PRK08303        168 HYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTE-ENWRDA-LAKEPHFAISETPRYVGR  245 (305)
T ss_pred             CCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCc-cchhhh-hccccccccCCCHHHHHH
Confidence            234567899999999999999999999999999999999999998532211000 011111 22345 467789999999


Q ss_pred             HHHHHhCCCC-CCccccEEE
Q 024994          222 LVAFLCLPAA-SYITGQIIC  240 (259)
Q Consensus       222 ~~~~l~~~~~-~~~~G~~l~  240 (259)
                      +++||+++.. .++||++|.
T Consensus       246 ~v~fL~s~~~~~~itG~~l~  265 (305)
T PRK08303        246 AVAALAADPDVARWNGQSLS  265 (305)
T ss_pred             HHHHHHcCcchhhcCCcEEE
Confidence            9999999874 589999875

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=7.9e-42  Score=282.43  Aligned_cols=244  Identities=31%  Similarity=0.488  Sum_probs=217.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEE-eeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHT-CSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||+++||++++++|+++|++|++ .+|+.++.++..++++..+.++.++.+|++|++++.++++++.+.+ +++
T Consensus         5 ~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i   83 (250)
T PRK08063          5 KVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEF-GRL   83 (250)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-CCC
Confidence            68999999999999999999999999876 5888888878777777667788999999999999999999999988 689


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      |+||||||.....++.+.+.+++++++++|+.+++.+++++.|+|.+++.++||++||..+..+.++...|+++|+++++
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a~~~  163 (250)
T PRK08063         84 DVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENYTTVGVSKAALEA  163 (250)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCccHHHHHHHHHHH
Confidence            99999999887778888999999999999999999999999999988778999999999888888889999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      |+++++.++.+.||+++.|+||++.|++.......   ...........|.++..+++|+++.+.+++++...+++|+.+
T Consensus       164 ~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~  240 (250)
T PRK08063        164 LTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNR---EELLEDARAKTPAGRMVEPEDVANAVLFLCSPEADMIRGQTI  240 (250)
T ss_pred             HHHHHHHHHhHhCeEEEeEecCcccCchhhhccCc---hHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCchhcCccCCEE
Confidence            99999999999999999999999999987543221   223444455667788899999999999999887889999999


Q ss_pred             EeCCCceee
Q 024994          240 CVDGGVTVT  248 (259)
Q Consensus       240 ~~dgG~~~~  248 (259)
                      .+|||..+.
T Consensus       241 ~~~gg~~~~  249 (250)
T PRK08063        241 IVDGGRSLL  249 (250)
T ss_pred             EECCCeeee
Confidence            999998764

>PRK06841 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.5e-42  Score=283.46  Aligned_cols=239  Identities=33%  Similarity=0.488  Sum_probs=211.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+++||.+++++|+++|++|++++|+.+.. ....++.  +.++.++++|+++.++++++++++.+.+ +++|
T Consensus        16 k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~-~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~~d   91 (255)
T PRK06841         16 KVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVA-EVAAQLL--GGNAKGLVCDVSDSQSVEAAVAAVISAF-GRID   91 (255)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHhh--CCceEEEEecCCCHHHHHHHHHHHHHHh-CCCC
Confidence            6899999999999999999999999999999987643 2333332  3457789999999999999999999988 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      ++|||+|.....+..+.+.+++++++++|+.+++.+++.+.|+|.+++.++||++||..+..+.+.+..|+++|++++++
T Consensus        92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~  171 (255)
T PRK06841         92 ILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKAGVVGM  171 (255)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCCCchHHHHHHHHHHH
Confidence            99999998877778888999999999999999999999999999887789999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC  240 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~  240 (259)
                      +++++.++.++||++|.|+||+++|++.......    ...+.+....|.+++.+|+|+++.+++++++.+.+++|+.+.
T Consensus       172 ~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~i~  247 (255)
T PRK06841        172 TKVLALEWGPYGITVNAISPTVVLTELGKKAWAG----EKGERAKKLIPAGRFAYPEEIAAAALFLASDAAAMITGENLV  247 (255)
T ss_pred             HHHHHHHHHhhCeEEEEEEeCcCcCcccccccch----hHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCCEEE
Confidence            9999999999999999999999999986543221    123345567788999999999999999999999999999999


Q ss_pred             eCCCcee
Q 024994          241 VDGGVTV  247 (259)
Q Consensus       241 ~dgG~~~  247 (259)
                      +|||+.+
T Consensus       248 ~dgg~~~  254 (255)
T PRK06841        248 IDGGYTI  254 (255)
T ss_pred             ECCCccC
Confidence            9999865

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=7.3e-43  Score=294.30  Aligned_cols=240  Identities=24%  Similarity=0.286  Sum_probs=191.5

Q ss_pred             CEEEEEcCc--chHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHH----------hcCC-----cEEEEEecCCCH--
Q 024994            1 MTALVTGGT--RGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK----------NKGF-----KVTGSVCDLSSR--   61 (259)
Q Consensus         1 k~~lItG~s--~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~-----~~~~~~~D~~~~--   61 (259)
                      |++||||++  +|||+++|+.|+++|++|++.++.+ .++...+..+          ..+.     ++..+..|+++.  
T Consensus         9 k~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~   87 (299)
T PRK06300          9 KIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDTPED   87 (299)
T ss_pred             CEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCCCEE
Confidence            789999996  9999999999999999999987541 1111100000          0011     011112233222  


Q ss_pred             ----------------HHHHHHHHHHHHHcCCCccEEEEcCCCCC--CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHH
Q 024994           62 ----------------EQREKLIETVTSIFQGKLNILINNAAIAF--VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPL  123 (259)
Q Consensus        62 ----------------~~~~~~~~~~~~~~~~~id~vi~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  123 (259)
                                      ++++++++++.+++ +++|+||||||...  ..++.+.+.++|++++++|+.+++.++++++|+
T Consensus        88 v~~~i~~~~~~~~~~~~si~~~~~~v~~~~-G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~  166 (299)
T PRK06300         88 VPEEIRENKRYKDLSGYTISEVAEQVKKDF-GHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPI  166 (299)
T ss_pred             eecccCccccccCCCHHHHHHHHHHHHHHc-CCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                            46899999999999 79999999999753  467889999999999999999999999999999


Q ss_pred             hHhCCCCEEEEecCCCccCCCCCCh-hhhhhHHHHHHHHHHHHHHHcc-CCceEEEEeCCceeCCCCCCCcCCCCchHHH
Q 024994          124 FKASGNGSIVFISSVGGVRGIPSVS-LYGAYKGAMNQLTKNLACEWAK-DNIRTNTVAPWVIKTSMIKPFEEGPEGSEFL  201 (259)
Q Consensus       124 ~~~~~~~~ii~isS~~~~~~~~~~~-~Y~~sK~a~~~~~~~~a~e~~~-~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~  201 (259)
                      |.+  .|+||+++|..+..+.|.+. .|++||+++++|+++++.|+++ +|||||+|+||++.|++......   .+...
T Consensus       167 m~~--~G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~~---~~~~~  241 (299)
T PRK06300        167 MNP--GGSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGF---IERMV  241 (299)
T ss_pred             hhc--CCeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhcccc---cHHHH
Confidence            965  37999999999988888765 8999999999999999999987 59999999999999998644311   11233


Q ss_pred             HhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCcee
Q 024994          202 DGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTV  247 (259)
Q Consensus       202 ~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~  247 (259)
                      +......|.++..+|+|++..++|++++.+.++||+.+.+|||..+
T Consensus       242 ~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~  287 (299)
T PRK06300        242 DYYQDWAPLPEPMEAEQVGAAAAFLVSPLASAITGETLYVDHGANV  287 (299)
T ss_pred             HHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCcce
Confidence            4455567889999999999999999999999999999999999665

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=100.00  E-value=3e-42  Score=287.71  Aligned_cols=237  Identities=32%  Similarity=0.427  Sum_probs=204.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+..+         ..++.++++|++|.++++++++++.+.+ +++|
T Consensus        10 k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~---------~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id   79 (266)
T PRK06171         10 KIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ---------HENYQFVPTDVSSAEEVNHTVAEIIEKF-GRID   79 (266)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc---------cCceEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence            68999999999999999999999999999999876542         2367888999999999999999999998 7899


Q ss_pred             EEEEcCCCCCCC---------CCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhh
Q 024994           81 ILINNAAIAFVK---------PTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYG  151 (259)
Q Consensus        81 ~vi~~ag~~~~~---------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~  151 (259)
                      ++|||||.....         +..+.+.++|++++++|+.+++.+++++.|+|.+++.++||++||..+..+.++...|+
T Consensus        80 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  159 (266)
T PRK06171         80 GLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQSCYA  159 (266)
T ss_pred             EEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCCchhH
Confidence            999999975432         23457899999999999999999999999999887779999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEeCCcee-CCCCCCCcC-------CCCchHHHHhhhh--cCCCCCCCCHHHHHH
Q 024994          152 AYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIK-TSMIKPFEE-------GPEGSEFLDGIAR--QTPIGRAGEPDEVSS  221 (259)
Q Consensus       152 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~-t~~~~~~~~-------~~~~~~~~~~~~~--~~~~~~~~~~~~va~  221 (259)
                      ++|+++++|+++++.+++++||+||.|+||+++ |++......       ........+.+..  ..|++|.++|+|+++
T Consensus       160 ~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~  239 (266)
T PRK06171        160 ATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPLGRSGKLSEVAD  239 (266)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhcccccccCCCCCCHHHhhh
Confidence            999999999999999999999999999999997 665432110       1111223334444  678999999999999


Q ss_pred             HHHHHhCCCCCCccccEEEeCCCcee
Q 024994          222 LVAFLCLPAASYITGQIICVDGGVTV  247 (259)
Q Consensus       222 ~~~~l~~~~~~~~~G~~l~~dgG~~~  247 (259)
                      ++.||+++.+.++||+.+.+|||...
T Consensus       240 ~~~fl~s~~~~~itG~~i~vdgg~~~  265 (266)
T PRK06171        240 LVCYLLSDRASYITGVTTNIAGGKTR  265 (266)
T ss_pred             heeeeeccccccceeeEEEecCcccC
Confidence            99999999999999999999999753

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=100.00  E-value=2e-41  Score=279.45  Aligned_cols=241  Identities=30%  Similarity=0.432  Sum_probs=213.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEe-eCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTC-SRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++||||+++|||++++++|+++|++|++. +++....++..+++...+.++..+.+|++|.++++++++++.+.+ +++
T Consensus         4 k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i   82 (246)
T PRK12938          4 RIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEV-GEI   82 (246)
T ss_pred             CEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh-CCC
Confidence            689999999999999999999999998885 455556666666666656678888999999999999999999988 799


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      |+||||||.....++.+.+.++|++++++|+.+++.++++++|.|.+.+.++||++||..+..+.+++..|+++|+++++
T Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sK~a~~~  162 (246)
T PRK12938         83 DVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHG  162 (246)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCCChhHHHHHHHHHH
Confidence            99999999876667888899999999999999999999999999988777899999999998888999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      |+++++.++.+.||+++.|+||+++|++.....     +...+.+....|..++.+++++++.+.|++++.+.+++|+.+
T Consensus       163 ~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~g~~~  237 (246)
T PRK12938        163 FTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIR-----PDVLEKIVATIPVRRLGSPDEIGSIVAWLASEESGFSTGADF  237 (246)
T ss_pred             HHHHHHHHhhhhCeEEEEEEecccCCchhhhcC-----hHHHHHHHhcCCccCCcCHHHHHHHHHHHcCcccCCccCcEE
Confidence            999999999999999999999999999876432     124455556678888999999999999999998899999999


Q ss_pred             EeCCCcee
Q 024994          240 CVDGGVTV  247 (259)
Q Consensus       240 ~~dgG~~~  247 (259)
                      .+|||..+
T Consensus       238 ~~~~g~~~  245 (246)
T PRK12938        238 SLNGGLHM  245 (246)
T ss_pred             EECCcccC
Confidence            99999654

>TIGR02415 23BDH acetoin reductases

Probab=100.00  E-value=2e-41  Score=280.61  Aligned_cols=246  Identities=33%  Similarity=0.491  Sum_probs=219.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++||||++|+||.+++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|.+++.++++++.+.+ +++|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~-~~id   79 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKF-GGFD   79 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-CCCC
Confidence            799999999999999999999999999999999888888877777667789999999999999999999999988 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      +||||+|....+++.+.+.++|++++++|+.+++.+++.+++.|.+.+ .+++|++||..+..+.+.+..|+++|+++++
T Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  159 (254)
T TIGR02415        80 VMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRG  159 (254)
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCCcchHHHHHHHHH
Confidence            999999998777888899999999999999999999999999998764 4799999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCC------CchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGP------EGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASY  233 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  233 (259)
                      |+++++.++.+.+|+++.++||+++|++........      ........+....+.+++.+|+|+++++.|++++.+.+
T Consensus       160 ~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~  239 (254)
T TIGR02415       160 LTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSFLASEDSDY  239 (254)
T ss_pred             HHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHHHHHHHHHhhcccccCC
Confidence            999999999999999999999999999865432111      11122344556788899999999999999999998899


Q ss_pred             ccccEEEeCCCcee
Q 024994          234 ITGQIICVDGGVTV  247 (259)
Q Consensus       234 ~~G~~l~~dgG~~~  247 (259)
                      ++|+.+.+|||...
T Consensus       240 ~~g~~~~~d~g~~~  253 (254)
T TIGR02415       240 ITGQSILVDGGMVY  253 (254)
T ss_pred             ccCcEEEecCCccC
Confidence            99999999999754

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK07890 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-41  Score=281.73  Aligned_cols=245  Identities=29%  Similarity=0.335  Sum_probs=214.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+.++....++...+.++.++.+|++|.++++++++++.+.+ +++|
T Consensus         6 k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~~d   84 (258)
T PRK07890          6 KVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERF-GRVD   84 (258)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHc-CCcc
Confidence            689999999999999999999999999999999988888777776656678999999999999999999999998 7899


Q ss_pred             EEEEcCCCCCC-CCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAFV-KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      ++|||||.... .++.+.+.++|++++++|+.+++.+++++.+.|.+. .++||++||..+..+.+++..|+++|++++.
T Consensus        85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~~  163 (258)
T PRK07890         85 ALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAES-GGSIVMINSMVLRHSQPKYGAYKMAKGALLA  163 (258)
T ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-CCEEEEEechhhccCCCCcchhHHHHHHHHH
Confidence            99999998643 567778899999999999999999999999999765 4799999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcC------CCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE------GPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASY  233 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  233 (259)
                      ++++++.++.+++|+++.++||++.|++......      ....+.....+....+.+++.+|+|+++++.|++++...+
T Consensus       164 l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~~~~~~  243 (258)
T PRK07890        164 ASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVASAVLFLASDLARA  243 (258)
T ss_pred             HHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCccccCCHHHHHHHHHHHcCHhhhC
Confidence            9999999999999999999999999997643211      1111223444455678888999999999999999987789


Q ss_pred             ccccEEEeCCCcee
Q 024994          234 ITGQIICVDGGVTV  247 (259)
Q Consensus       234 ~~G~~l~~dgG~~~  247 (259)
                      ++|+.+.+|||..+
T Consensus       244 ~~G~~i~~~gg~~~  257 (258)
T PRK07890        244 ITGQTLDVNCGEYH  257 (258)
T ss_pred             ccCcEEEeCCcccc
Confidence            99999999999754

>PRK06523 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.5e-42  Score=284.29  Aligned_cols=238  Identities=32%  Similarity=0.394  Sum_probs=204.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+..         ...++.++++|++|.++++++++++.+.+ +++|
T Consensus        10 k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~---------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id   79 (260)
T PRK06523         10 KRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD---------LPEGVEFVAADLTTAEGCAAVARAVLERL-GGVD   79 (260)
T ss_pred             CEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh---------cCCceeEEecCCCCHHHHHHHHHHHHHHc-CCCC
Confidence            6899999999999999999999999999999986532         13368889999999999999999999988 7899


Q ss_pred             EEEEcCCCCC--CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCC-CChhhhhhHHHH
Q 024994           81 ILINNAAIAF--VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIP-SVSLYGAYKGAM  157 (259)
Q Consensus        81 ~vi~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~-~~~~Y~~sK~a~  157 (259)
                      +||||||...  ..++.+.+.++|++++++|+.+++.++++++|+|.+++.++||++||..+..+.+ ++..|+++|+++
T Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~~Y~~sK~a~  159 (260)
T PRK06523         80 ILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAYAAAKAAL  159 (260)
T ss_pred             EEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCCcchhHHHHHHH
Confidence            9999999753  3467778899999999999999999999999999887778999999999888865 789999999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcC------CCCchHHHHh---hhhcCCCCCCCCHHHHHHHHHHHhC
Q 024994          158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE------GPEGSEFLDG---IARQTPIGRAGEPDEVSSLVAFLCL  228 (259)
Q Consensus       158 ~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~------~~~~~~~~~~---~~~~~~~~~~~~~~~va~~~~~l~~  228 (259)
                      ++|+++++.++.++||++|+|+||+++|++......      ....+...+.   .....|.++..+|+|+++++.||++
T Consensus       160 ~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~s  239 (260)
T PRK06523        160 STYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPEEVAELIAFLAS  239 (260)
T ss_pred             HHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCccCCCCCHHHHHHHHHHHhC
Confidence            999999999999999999999999999998643211      0111111111   1235788999999999999999999


Q ss_pred             CCCCCccccEEEeCCCceee
Q 024994          229 PAASYITGQIICVDGGVTVT  248 (259)
Q Consensus       229 ~~~~~~~G~~l~~dgG~~~~  248 (259)
                      +.+.+++|+.+.+|||...+
T Consensus       240 ~~~~~~~G~~~~vdgg~~~~  259 (260)
T PRK06523        240 DRAASITGTEYVIDGGTVPT  259 (260)
T ss_pred             cccccccCceEEecCCccCC
Confidence            98899999999999997664

>PRK06949 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4e-41  Score=279.47  Aligned_cols=240  Identities=28%  Similarity=0.424  Sum_probs=215.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+|+||++++++|+++|++|++++|+.++++.+..++...+.++.++.+|+++.+++.++++++.+.+ +++|
T Consensus        10 k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~d   88 (258)
T PRK06949         10 KVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEA-GTID   88 (258)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc-CCCC
Confidence            789999999999999999999999999999999998888777776556678999999999999999999998888 7899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC--------CCEEEEecCCCccCCCCCChhhhh
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG--------NGSIVFISSVGGVRGIPSVSLYGA  152 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--------~~~ii~isS~~~~~~~~~~~~Y~~  152 (259)
                      ++|||+|.....++.+.+.++|+.++++|+.+++.++++++|.|.++.        .+++|++||..+..+.+...+|++
T Consensus        89 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~  168 (258)
T PRK06949         89 ILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIGLYCM  168 (258)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCCccHHHH
Confidence            999999987777778888999999999999999999999999997653        479999999999888888999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCC
Q 024994          153 YKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAAS  232 (259)
Q Consensus       153 sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  232 (259)
                      +|++++.++++++.++.+.||++++|+||+++|++.......    .....+....|.++.+.|+|+++.+.||+++.+.
T Consensus       169 sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~  244 (258)
T PRK06949        169 SKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWET----EQGQKLVSMLPRKRVGKPEDLDGLLLLLAADESQ  244 (258)
T ss_pred             HHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccCh----HHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhc
Confidence            999999999999999999999999999999999987643321    1234455667889999999999999999999899


Q ss_pred             CccccEEEeCCCc
Q 024994          233 YITGQIICVDGGV  245 (259)
Q Consensus       233 ~~~G~~l~~dgG~  245 (259)
                      +++|+.+.+|||.
T Consensus       245 ~~~G~~i~~dgg~  257 (258)
T PRK06949        245 FINGAIISADDGF  257 (258)
T ss_pred             CCCCcEEEeCCCC
Confidence            9999999999996

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=100.00  E-value=4e-41  Score=278.13  Aligned_cols=246  Identities=28%  Similarity=0.466  Sum_probs=219.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+++||.+++++|+++|++|++++|+.+..+...+++...+.++.++++|++|.++++++++++.+.+ +++|
T Consensus         4 ~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~d   82 (250)
T TIGR03206         4 KTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQAL-GPVD   82 (250)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-CCCC
Confidence            689999999999999999999999999999999988877777776666679999999999999999999999988 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      ++|||+|.....++.+.+.+++++++++|+.+++.+++.+++.|.+.+.+++|++||..+..+.+....|+.+|++++.+
T Consensus        83 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~~~~Y~~sK~a~~~~  162 (250)
T TIGR03206        83 VLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGLVAF  162 (250)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCCCchHHHHHHHHHHH
Confidence            99999998766777888899999999999999999999999999887778999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCC-CchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGP-EGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      +++++.++.+.+++++.++||+++|++........ ........+....|.++..+++|+++++.+++++...+++|+.+
T Consensus       163 ~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~  242 (250)
T TIGR03206       163 SKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILFFSSDDASFITGQVL  242 (250)
T ss_pred             HHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCccCCcCHHHHHHHHHHHcCcccCCCcCcEE
Confidence            99999999888999999999999999876543221 12224456667788899999999999999999999999999999


Q ss_pred             EeCCCcee
Q 024994          240 CVDGGVTV  247 (259)
Q Consensus       240 ~~dgG~~~  247 (259)
                      .+|||+.+
T Consensus       243 ~~~~g~~~  250 (250)
T TIGR03206       243 SVSGGLTM  250 (250)
T ss_pred             EeCCCccC
Confidence            99999653

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.7e-41  Score=278.83  Aligned_cols=240  Identities=31%  Similarity=0.380  Sum_probs=205.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeC-ChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSR-NQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||++|||++++++|+++|++|+++.+ +.+..+....++   +.++.++++|++|.++++++++++.+.++.++
T Consensus         6 k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~i   82 (253)
T PRK08642          6 QTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL---GDRAIALQADVTDREQVQAMFATATEHFGKPI   82 (253)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence            68999999999999999999999999988765 455544444333   34788899999999999999999998884349


Q ss_pred             cEEEEcCCCCC------CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhh
Q 024994           80 NILINNAAIAF------VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAY  153 (259)
Q Consensus        80 d~vi~~ag~~~------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  153 (259)
                      |++|||||...      ..++.+.+.++|++++++|+.+++.++++++|.|.+.+.++|+++||.....+.+++..|++|
T Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~s  162 (253)
T PRK08642         83 TTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVVPYHDYTTA  162 (253)
T ss_pred             eEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCccchHHH
Confidence            99999998642      235677889999999999999999999999999987777999999998887777788899999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 024994          154 KGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASY  233 (259)
Q Consensus       154 K~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  233 (259)
                      |+++++|++++++++.++|||||+|+||+++|+......    .+...+.+....|.+++.+|+|+++++.||+++.+.+
T Consensus       163 K~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  238 (253)
T PRK08642        163 KAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAAT----PDEVFDLIAATTPLRKVTTPQEFADAVLFFASPWARA  238 (253)
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccC----CHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCchhcC
Confidence            999999999999999999999999999999998654321    1224455566788999999999999999999998899


Q ss_pred             ccccEEEeCCCcee
Q 024994          234 ITGQIICVDGGVTV  247 (259)
Q Consensus       234 ~~G~~l~~dgG~~~  247 (259)
                      ++|+.+.+|||..+
T Consensus       239 ~~G~~~~vdgg~~~  252 (253)
T PRK08642        239 VTGQNLVVDGGLVM  252 (253)
T ss_pred             ccCCEEEeCCCeec
Confidence            99999999999654

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=100.00  E-value=3.1e-41  Score=277.16  Aligned_cols=236  Identities=31%  Similarity=0.436  Sum_probs=209.1

Q ss_pred             EEEEcCcchHHHHHHHHHHHCCCEEEEeeCC-hhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCccE
Q 024994            3 ALVTGGTRGIGHATVEELARFGAIVHTCSRN-QIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNI   81 (259)
Q Consensus         3 ~lItG~s~giG~~~a~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~   81 (259)
                      +|||||++|||++++++|+++|++|++++|+ .+..+...+++...+.++.++++|++|.++++++++++.+.+ +++|+
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~i~~   79 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEH-GAYYG   79 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHc-CCCCE
Confidence            5899999999999999999999999998865 456666667776666789999999999999999999988888 68999


Q ss_pred             EEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHH-HHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           82 LINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH-PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        82 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~-~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +|||+|.....++.+.+.++|+.++++|+.+++.++++++ |.+.+.+.++||++||..+..+.+++..|+++|++++++
T Consensus        80 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~  159 (239)
T TIGR01831        80 VVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGA  159 (239)
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCCcchHHHHHHHHHH
Confidence            9999998877777788999999999999999999999875 555555678999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC  240 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~  240 (259)
                      +++++.++.++||+++.++||+++|++......      ..+......|+++..+|+|+++.++||+++.+.+++|+.+.
T Consensus       160 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~  233 (239)
T TIGR01831       160 TKALAVELAKRKITVNCIAPGLIDTEMLAEVEH------DLDEALKTVPMNRMGQPAEVASLAGFLMSDGASYVTRQVIS  233 (239)
T ss_pred             HHHHHHHHhHhCeEEEEEEEccCccccchhhhH------HHHHHHhcCCCCCCCCHHHHHHHHHHHcCchhcCccCCEEE
Confidence            999999999999999999999999998764311      23344567889999999999999999999999999999999


Q ss_pred             eCCCc
Q 024994          241 VDGGV  245 (259)
Q Consensus       241 ~dgG~  245 (259)
                      +|||.
T Consensus       234 ~~gg~  238 (239)
T TIGR01831       234 VNGGM  238 (239)
T ss_pred             ecCCc
Confidence            99995

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK06500 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.1e-41  Score=277.36  Aligned_cols=240  Identities=30%  Similarity=0.430  Sum_probs=210.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+++||++++++|+++|++|++++|+.+.+++..+++   +.++.++++|++|.+++.++++++.+.+ +++|
T Consensus         7 k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id   82 (249)
T PRK06500          7 KTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL---GESALVIRADAGDVAAQKALAQALAEAF-GRLD   82 (249)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHh-CCCC
Confidence            68999999999999999999999999999999987776655544   4578899999999999999999999988 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      ++|||||.....++.+.+.+++++++++|+.+++.++++++|+|.+  .+++|+++|..+..+.+....|+++|++++++
T Consensus        83 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~i~~~S~~~~~~~~~~~~Y~~sK~a~~~~  160 (249)
T PRK06500         83 AVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN--PASIVLNGSINAHIGMPNSSVYAASKAALLSL  160 (249)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEechHhccCCCCccHHHHHHHHHHHH
Confidence            9999999877777788899999999999999999999999999854  47899999999989999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCc-CCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE-EGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      +++++.|+.++||+++.++||+++|++..... ...........+....|+++..+|+|+++++.|++++.+.+++|+.+
T Consensus       161 ~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~i  240 (249)
T PRK06500        161 AKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIAKAVLYLASDESAFIVGSEI  240 (249)
T ss_pred             HHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCCeE
Confidence            99999999999999999999999999865421 11111223344556678889999999999999999988899999999


Q ss_pred             EeCCCce
Q 024994          240 CVDGGVT  246 (259)
Q Consensus       240 ~~dgG~~  246 (259)
                      .+|||.+
T Consensus       241 ~~~gg~~  247 (249)
T PRK06500        241 IVDGGMS  247 (249)
T ss_pred             EECCCcc
Confidence            9999954

>PRK07576 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.3e-41  Score=279.95  Aligned_cols=246  Identities=28%  Similarity=0.450  Sum_probs=213.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||.+++++|+++|++|++++|+.+.++...+++...+.++.++++|+++.++++++++++.+.+ +++|
T Consensus        10 k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~-~~iD   88 (264)
T PRK07576         10 KNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEF-GPID   88 (264)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc-CCCC
Confidence            689999999999999999999999999999999888877766666555577889999999999999999999888 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      ++|||||.....++.+.+.++|++++++|+.+++.++++++|.|.++ +++|+++||..+..+.+.+..|+++|+++++|
T Consensus        89 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~-~g~iv~iss~~~~~~~~~~~~Y~asK~a~~~l  167 (264)
T PRK07576         89 VLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP-GASIIQISAPQAFVPMPMQAHVCAAKAGVDML  167 (264)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCEEEEECChhhccCCCCccHHHHHHHHHHHH
Confidence            99999997766777888999999999999999999999999999765 48999999998888889999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCcee-CCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIK-TSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      +++++.++.++||+++.|+||+++ |+........   ......+....|.++...|+|+++.+.+++++...+++|+.+
T Consensus       168 ~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~  244 (264)
T PRK07576        168 TRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPS---PELQAAVAQSVPLKRNGTKQDIANAALFLASDMASYITGVVL  244 (264)
T ss_pred             HHHHHHHhhhcCeEEEEEecccccCcHHHhhcccC---HHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhcCccCCEE
Confidence            999999999999999999999997 5544332211   123333445578888999999999999999988889999999


Q ss_pred             EeCCCceeeecc
Q 024994          240 CVDGGVTVTVNV  251 (259)
Q Consensus       240 ~~dgG~~~~~~~  251 (259)
                      .+|||..+....
T Consensus       245 ~~~gg~~~~~~~  256 (264)
T PRK07576        245 PVDGGWSLGGAS  256 (264)
T ss_pred             EECCCcccCchH
Confidence            999998654433

>PRK12939 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.8e-41  Score=275.74  Aligned_cols=242  Identities=29%  Similarity=0.398  Sum_probs=219.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++||||++|+||++++++|+++|++|++++|+.++.+...++++..+.++.++++|++|.++++++++++.+.+ +++|
T Consensus         8 ~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~id   86 (250)
T PRK12939          8 KRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAAL-GGLD   86 (250)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence            689999999999999999999999999999999988888777776666689999999999999999999999988 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      ++|||+|.....++.+.+.+++++.++.|+.+++.+++.+.|+|.+++.+++|++||..+..+.+....|+++|++++++
T Consensus        87 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~~~~~~  166 (250)
T PRK12939         87 GLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVASKGAVIGM  166 (250)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCCcchHHHHHHHHHHH
Confidence            99999999877778888999999999999999999999999999887789999999999989888899999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC  240 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~  240 (259)
                      ++.++.++.+.+|+++.|+||+++|++......    ......+....|..++.+++|+++++++++++..++++|+.|.
T Consensus       167 ~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~  242 (250)
T PRK12939        167 TRSLARELGGRGITVNAIAPGLTATEATAYVPA----DERHAYYLKGRALERLQVPDDVAGAVLFLLSDAARFVTGQLLP  242 (250)
T ss_pred             HHHHHHHHhhhCEEEEEEEECCCCCccccccCC----hHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCccCcEEE
Confidence            999999999899999999999999998754322    1244555667788899999999999999998888899999999


Q ss_pred             eCCCcee
Q 024994          241 VDGGVTV  247 (259)
Q Consensus       241 ~dgG~~~  247 (259)
                      +|||..|
T Consensus       243 ~~gg~~~  249 (250)
T PRK12939        243 VNGGFVM  249 (250)
T ss_pred             ECCCccc
Confidence            9999876

>PRK07814 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-40  Score=277.88  Aligned_cols=242  Identities=30%  Similarity=0.471  Sum_probs=215.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||.+++++|+++|++|++++|+.+++++..+++...+.++.++.+|++++++++++++++.+.+ +++|
T Consensus        11 ~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id   89 (263)
T PRK07814         11 QVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAF-GRLD   89 (263)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence            689999999999999999999999999999999988888777776656678899999999999999999999988 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHh-CCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKA-SGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      +||||||.....++.+.+.+++++++++|+.+++.+.+++.|.|.+ .+.+++|++||..+..+.++...|+++|+++++
T Consensus        90 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  169 (263)
T PRK07814         90 IVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAKAALAH  169 (263)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCCCchhHHHHHHHHH
Confidence            9999999876677788899999999999999999999999999976 457899999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      ++++++.++.+ +|++++|+||++.|++......   .......+....+..+..+++|+++.++|++++.+.+++|+.+
T Consensus       170 ~~~~~~~e~~~-~i~v~~i~Pg~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~  245 (263)
T PRK07814        170 YTRLAALDLCP-RIRVNAIAPGSILTSALEVVAA---NDELRAPMEKATPLRRLGDPEDIAAAAVYLASPAGSYLTGKTL  245 (263)
T ss_pred             HHHHHHHHHCC-CceEEEEEeCCCcCchhhhccC---CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcCCCEE
Confidence            99999999987 6999999999999997643321   1224445555678888899999999999999988899999999


Q ss_pred             EeCCCcee
Q 024994          240 CVDGGVTV  247 (259)
Q Consensus       240 ~~dgG~~~  247 (259)
                      .+|||...
T Consensus       246 ~~~~~~~~  253 (263)
T PRK07814        246 EVDGGLTF  253 (263)
T ss_pred             EECCCccC
Confidence            99999665

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=100.00  E-value=7.9e-41  Score=276.80  Aligned_cols=237  Identities=28%  Similarity=0.376  Sum_probs=209.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++||||++++||.+++++|+++|++|++++|+.         +...+.++.++++|+++.++++++++++.+.+ +++|
T Consensus         9 k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id   78 (252)
T PRK08220          9 KTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQEDYPFATFVLDVSDAAAVAQVCQRLLAET-GPLD   78 (252)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhhcCCceEEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence            6899999999999999999999999999999986         11224578899999999999999999999988 7899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      ++|||+|.....+..+.+.+++++++++|+.+++.+++++.|.|.+++.++||++||..+..+.++...|+++|+++++|
T Consensus        79 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~  158 (252)
T PRK08220         79 VLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGASKAALTSL  158 (252)
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCCCchhHHHHHHHHHH
Confidence            99999999877788888999999999999999999999999999887788999999999988888999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCc-----hHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcc
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEG-----SEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT  235 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~  235 (259)
                      +++++.|+.+.||+|+.++||+++|++..........     ....+.+....|.+++.+|+|++++++||+++...+++
T Consensus       159 ~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  238 (252)
T PRK08220        159 AKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANAVLFLASDLASHIT  238 (252)
T ss_pred             HHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCCcccCCHHHHHHHHHHHhcchhcCcc
Confidence            9999999999999999999999999986543221110     01123445567889999999999999999998889999


Q ss_pred             ccEEEeCCCcee
Q 024994          236 GQIICVDGGVTV  247 (259)
Q Consensus       236 G~~l~~dgG~~~  247 (259)
                      |+++.+|||..+
T Consensus       239 g~~i~~~gg~~~  250 (252)
T PRK08220        239 LQDIVVDGGATL  250 (252)
T ss_pred             CcEEEECCCeec
Confidence            999999999776

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.8e-40  Score=274.29  Aligned_cols=244  Identities=33%  Similarity=0.514  Sum_probs=216.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+|+||.+++++|+++|++|++++|+.++.+....++.. +.++.++++|++|.++++++++++.+.+ +++|
T Consensus         6 ~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~d   83 (251)
T PRK07231          6 KVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA-GGRAIAVAADVSDEADVEAAVAAALERF-GSVD   83 (251)
T ss_pred             cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHh-CCCC
Confidence            6899999999999999999999999999999999888777666654 4578899999999999999999998888 6899


Q ss_pred             EEEEcCCCCC-CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      +|||++|... ..++.+.+.+++++.+++|+.+++.+++.++++|.+++.++||++||..+..+.++...|+.+|++++.
T Consensus        84 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~~~~~  163 (251)
T PRK07231         84 ILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASKGAVIT  163 (251)
T ss_pred             EEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCCchHHHHHHHHHHH
Confidence            9999999854 345778899999999999999999999999999988778999999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      +++.++.++.+.||++++++||+++|++........ .......+....|.+++.+++|+++++++++++...+++|+.+
T Consensus       164 ~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~  242 (251)
T PRK07231        164 LTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEP-TPENRAKFLATIPLGRLGTPEDIANAALFLASDEASWITGVTL  242 (251)
T ss_pred             HHHHHHHHhhhhCeEEEEEEECccCCCcchhhhccc-ChHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCccccCCCCCeE
Confidence            999999999988999999999999999876543322 1224445666778889999999999999999988889999999


Q ss_pred             EeCCCcee
Q 024994          240 CVDGGVTV  247 (259)
Q Consensus       240 ~~dgG~~~  247 (259)
                      .+|||..+
T Consensus       243 ~~~gg~~~  250 (251)
T PRK07231        243 VVDGGRCV  250 (251)
T ss_pred             EECCCccC
Confidence            99999765

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=1.6e-40  Score=273.68  Aligned_cols=241  Identities=33%  Similarity=0.433  Sum_probs=212.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChh-HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI-ELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++||||++++||.+++++|+++|++|++++|+.+ ..+.....+...+.++.++.+|++|.++++++++++.+.+ +++
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-~~i   81 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEE-GPV   81 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHc-CCC
Confidence            68999999999999999999999999999999854 2223333333335578899999999999999999999988 689


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      |++|||+|.....++.+.+.++|++++++|+.+++.++++++|.|.+.+.++||++||..+..+.++...|+++|+++++
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~Y~~sK~a~~~  161 (245)
T PRK12824         82 DILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIG  161 (245)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCCChHHHHHHHHHHH
Confidence            99999999987777888899999999999999999999999999988778999999999999888999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      ++++++.++.+.||+++.++||+++|++.....     ......+....|.++..+++|+++++.+++++...+++|+.+
T Consensus       162 ~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~  236 (245)
T PRK12824        162 FTKALASEGARYGITVNCIAPGYIATPMVEQMG-----PEVLQSIVNQIPMKRLGTPEEIAAAVAFLVSEAAGFITGETI  236 (245)
T ss_pred             HHHHHHHHHHHhCeEEEEEEEcccCCcchhhcC-----HHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCccCcEE
Confidence            999999999999999999999999999865432     224455666778889999999999999999888889999999


Q ss_pred             EeCCCcee
Q 024994          240 CVDGGVTV  247 (259)
Q Consensus       240 ~~dgG~~~  247 (259)
                      .+|||+.|
T Consensus       237 ~~~~g~~~  244 (245)
T PRK12824        237 SINGGLYM  244 (245)
T ss_pred             EECCCeec
Confidence            99999865

>PRK07069 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.1e-40  Score=275.63  Aligned_cols=245  Identities=31%  Similarity=0.469  Sum_probs=212.5

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeCC-hhHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSRN-QIELDARLHEWKNKG--FKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      ++|||||++|||++++++|+++|++|++++|+ .+.++...+++....  ..+.++++|++|.++++++++++.+.+ ++
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~   79 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAM-GG   79 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHc-CC
Confidence            38999999999999999999999999999998 666666666655432  245668899999999999999999988 68


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      +|++|||||....+++.+.+.+++++++++|+.+++.+++.++|.|++.+.++||++||..+..+.+++..|+++|++++
T Consensus        80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~Y~~sK~a~~  159 (251)
T PRK07069         80 LSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVA  159 (251)
T ss_pred             ccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCCchhHHHHHHHH
Confidence            99999999988777888889999999999999999999999999998877799999999999999999999999999999


Q ss_pred             HHHHHHHHHHccCC--ceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccc
Q 024994          159 QLTKNLACEWAKDN--IRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG  236 (259)
Q Consensus       159 ~~~~~~a~e~~~~g--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G  236 (259)
                      +++++++.|+.+++  |+++.|+||+++|++................+....|.+++.+|+|+++++++++++.+.+++|
T Consensus       160 ~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g  239 (251)
T PRK07069        160 SLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVAHAVLYLASDESRFVTG  239 (251)
T ss_pred             HHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCCCCCCcCHHHHHHHHHHHcCccccCccC
Confidence            99999999997765  9999999999999987543221122223445556678889999999999999999988899999


Q ss_pred             cEEEeCCCcee
Q 024994          237 QIICVDGGVTV  247 (259)
Q Consensus       237 ~~l~~dgG~~~  247 (259)
                      +.+.+|||.+.
T Consensus       240 ~~i~~~~g~~~  250 (251)
T PRK07069        240 AELVIDGGICA  250 (251)
T ss_pred             CEEEECCCeec
Confidence            99999999653

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.4e-40  Score=274.77  Aligned_cols=237  Identities=31%  Similarity=0.398  Sum_probs=207.1

Q ss_pred             CEEEEEcCcc--hHHHHHHHHHHHCCCEEEEeeCC-----------hhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHH
Q 024994            1 MTALVTGGTR--GIGHATVEELARFGAIVHTCSRN-----------QIELDARLHEWKNKGFKVTGSVCDLSSREQREKL   67 (259)
Q Consensus         1 k~~lItG~s~--giG~~~a~~l~~~G~~V~~~~r~-----------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   67 (259)
                      |++|||||++  |||.+++++|+++|++|++++|+           .........++...+.++.++++|+++.++++++
T Consensus         6 k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   85 (256)
T PRK12748          6 KIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAPNRV   85 (256)
T ss_pred             cEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence            6899999994  99999999999999999999987           2222224444545566799999999999999999


Q ss_pred             HHHHHHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCC
Q 024994           68 IETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSV  147 (259)
Q Consensus        68 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~  147 (259)
                      ++++.+.+ +++|+||||||+....++.+.+.+++++.+++|+.+++.+.+++++.|.+...++||++||..+..+.+++
T Consensus        86 ~~~~~~~~-g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~  164 (256)
T PRK12748         86 FYAVSERL-GDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPMPDE  164 (256)
T ss_pred             HHHHHHhC-CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCCCCc
Confidence            99999988 68999999999877778888899999999999999999999999999977667899999999988888889


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHh
Q 024994          148 SLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLC  227 (259)
Q Consensus       148 ~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  227 (259)
                      ..|+++|+++++++++++.++.+.||+++.++||+++|++....        ....+....+..+..+|+|+++.+.|++
T Consensus       165 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~--------~~~~~~~~~~~~~~~~~~~~a~~~~~l~  236 (256)
T PRK12748        165 LAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEE--------LKHHLVPKFPQGRVGEPVDAARLIAFLV  236 (256)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChh--------HHHhhhccCCCCCCcCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999875321        2333445566778889999999999999


Q ss_pred             CCCCCCccccEEEeCCCce
Q 024994          228 LPAASYITGQIICVDGGVT  246 (259)
Q Consensus       228 ~~~~~~~~G~~l~~dgG~~  246 (259)
                      ++.+.+++|+++.+|||++
T Consensus       237 ~~~~~~~~g~~~~~d~g~~  255 (256)
T PRK12748        237 SEEAKWITGQVIHSEGGFS  255 (256)
T ss_pred             CcccccccCCEEEecCCcc
Confidence            9988999999999999975

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=100.00  E-value=6e-41  Score=278.40  Aligned_cols=238  Identities=26%  Similarity=0.303  Sum_probs=201.9

Q ss_pred             EEEEEcCcchHHHHHHHHHHH----CCCEEEEeeCChhHHHHHHHHHHh--cCCcEEEEEecCCCHHHHHHHHHHHHHHc
Q 024994            2 TALVTGGTRGIGHATVEELAR----FGAIVHTCSRNQIELDARLHEWKN--KGFKVTGSVCDLSSREQREKLIETVTSIF   75 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~----~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (259)
                      ++|||||++|||++++++|++    +|++|++++|+.+.+++..+++..  .+.++.++++|++|.++++++++++.+.+
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            689999999999999999997    799999999999998888887765  24578899999999999999999998876


Q ss_pred             CCC----ccEEEEcCCCCCCC--CCCC-CCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC--CCEEEEecCCCccCCCCC
Q 024994           76 QGK----LNILINNAAIAFVK--PTVD-ITAEDMSTVSSTNFESVFHLSQLAHPLFKASG--NGSIVFISSVGGVRGIPS  146 (259)
Q Consensus        76 ~~~----id~vi~~ag~~~~~--~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~ii~isS~~~~~~~~~  146 (259)
                       +.    .|+||||||.....  ...+ .+.++|++++++|+.+++.+++.++|.|.+++  .++||++||..+..+.++
T Consensus        82 -g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~  160 (256)
T TIGR01500        82 -RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKG  160 (256)
T ss_pred             -ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCC
Confidence             33    36999999975432  2233 35789999999999999999999999998653  479999999999999999


Q ss_pred             ChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHH
Q 024994          147 VSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFL  226 (259)
Q Consensus       147 ~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  226 (259)
                      +..|++||+++++|+++++.|+.++||+||+|+||+++|++.....+....+.....+....|.+++.+|+|+++.++++
T Consensus       161 ~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l  240 (256)
T TIGR01500       161 WALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELKAKGKLVDPKVSAQKLLSL  240 (256)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHHhcCCCCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999998754322111222445566777899999999999999999


Q ss_pred             hCCCCCCccccEEEe
Q 024994          227 CLPAASYITGQIICV  241 (259)
Q Consensus       227 ~~~~~~~~~G~~l~~  241 (259)
                      ++ ..+++||+++.+
T Consensus       241 ~~-~~~~~~G~~~~~  254 (256)
T TIGR01500       241 LE-KDKFKSGAHVDY  254 (256)
T ss_pred             Hh-cCCcCCcceeec
Confidence            97 568999998764

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=100.00  E-value=3.4e-40  Score=271.23  Aligned_cols=241  Identities=36%  Similarity=0.488  Sum_probs=215.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeC-ChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSR-NQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||+++||++++++|+++|++|+++.| +.+..++...++...+.++.++.+|++|+++++++++++.+.+ +++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i   79 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAEL-GPI   79 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHc-CCC
Confidence            79999999999999999999999999999988 6666666666665556678999999999999999999999988 689


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      |+||||+|.....++.+.+.+++++.+++|+.+++.++++++|.|.+.+.++||++||..+..+.+++..|+++|++++.
T Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sk~a~~~  159 (242)
T TIGR01829        80 DVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIG  159 (242)
T ss_pred             cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCcchhHHHHHHHHH
Confidence            99999999877777788899999999999999999999999999988777899999999988888999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      ++++++.++.+.|++++.++||++.|++.....     +.....+....|.+++.+|+++++.+.|+++++..+++|+.+
T Consensus       160 ~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~  234 (242)
T TIGR01829       160 FTKALAQEGATKGVTVNTISPGYIATDMVMAMR-----EDVLNSIVAQIPVGRLGRPEEIAAAVAFLASEEAGYITGATL  234 (242)
T ss_pred             HHHHHHHHhhhhCeEEEEEeeCCCcCccccccc-----hHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEE
Confidence            999999999989999999999999999875432     124445556778889999999999999999988889999999


Q ss_pred             EeCCCcee
Q 024994          240 CVDGGVTV  247 (259)
Q Consensus       240 ~~dgG~~~  247 (259)
                      .+|||.++
T Consensus       235 ~~~gg~~~  242 (242)
T TIGR01829       235 SINGGLYM  242 (242)
T ss_pred             EecCCccC
Confidence            99999753

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK05717 oxidoreductase; Validated

Probab=100.00  E-value=3.3e-40  Score=273.75  Aligned_cols=237  Identities=29%  Similarity=0.353  Sum_probs=205.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+++||++++++|+++|++|++++|+.++.++..+++   +.++.++++|+++.++++++++++.+.+ +++|
T Consensus        11 k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g~id   86 (255)
T PRK05717         11 RVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL---GENAWFIAMDVADEAQVAAGVAEVLGQF-GRLD   86 (255)
T ss_pred             CEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHHh-CCCC
Confidence            78999999999999999999999999999999887766554433   4468899999999999999999999988 6899


Q ss_pred             EEEEcCCCCCC--CCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           81 ILINNAAIAFV--KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        81 ~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      ++|||||....  .++.+.+.++|++++++|+.+++.+++++.|+|.+. .++||++||..+..+.+.+..|+++|++++
T Consensus        87 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~ii~~sS~~~~~~~~~~~~Y~~sKaa~~  165 (255)
T PRK05717         87 ALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH-NGAIVNLASTRARQSEPDTEAYAASKGGLL  165 (255)
T ss_pred             EEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CcEEEEEcchhhcCCCCCCcchHHHHHHHH
Confidence            99999998643  466778999999999999999999999999999765 489999999999999889999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI  238 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~  238 (259)
                      +++++++.++.+ +|+|++++||+++|++......    ...........|.++..+|+|+++.+.|++++...+++|+.
T Consensus       166 ~~~~~la~~~~~-~i~v~~i~Pg~i~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~  240 (255)
T PRK05717        166 ALTHALAISLGP-EIRVNAVSPGWIDARDPSQRRA----EPLSEADHAQHPAGRVGTVEDVAAMVAWLLSRQAGFVTGQE  240 (255)
T ss_pred             HHHHHHHHHhcC-CCEEEEEecccCcCCccccccc----hHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCchhcCccCcE
Confidence            999999999976 4999999999999997533211    11223333466888999999999999999998888999999


Q ss_pred             EEeCCCcee
Q 024994          239 ICVDGGVTV  247 (259)
Q Consensus       239 l~~dgG~~~  247 (259)
                      +.+|||...
T Consensus       241 ~~~~gg~~~  249 (255)
T PRK05717        241 FVVDGGMTR  249 (255)
T ss_pred             EEECCCceE
Confidence            999999764

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-40  Score=274.23  Aligned_cols=241  Identities=33%  Similarity=0.511  Sum_probs=213.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+|+||.+++++|+++|++|++++|+.++++...+++...+.++.++++|++|.++++++++++.+.+ +++|
T Consensus        13 k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~-~~id   91 (259)
T PRK08213         13 KTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERF-GHVD   91 (259)
T ss_pred             CEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh-CCCC
Confidence            689999999999999999999999999999999988877777776656678899999999999999999999988 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHH-hHhCCCCEEEEecCCCccCCCCC----ChhhhhhHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPL-FKASGNGSIVFISSVGGVRGIPS----VSLYGAYKG  155 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-~~~~~~~~ii~isS~~~~~~~~~----~~~Y~~sK~  155 (259)
                      ++|||||.....+..+.+.+.|++++++|+.+++.+++++.|+ |.+++.+++|++||..+..+.++    ...|+++|+
T Consensus        92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~~~~~~~Y~~sKa  171 (259)
T PRK08213         92 ILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNTSKG  171 (259)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCccccCcchHHHHHH
Confidence            9999999876667778899999999999999999999999998 76666789999999887766544    489999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcc
Q 024994          156 AMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT  235 (259)
Q Consensus       156 a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~  235 (259)
                      ++++++++++.++.++||+++.++||+++|++.....     +...+......|.+++++++|++..+.+++++.+.+++
T Consensus       172 ~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~  246 (259)
T PRK08213        172 AVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTL-----ERLGEDLLAHTPLGRLGDDEDLKGAALLLASDASKHIT  246 (259)
T ss_pred             HHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhh-----HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcc
Confidence            9999999999999999999999999999999765432     12344456677888999999999999999999999999


Q ss_pred             ccEEEeCCCcee
Q 024994          236 GQIICVDGGVTV  247 (259)
Q Consensus       236 G~~l~~dgG~~~  247 (259)
                      |+.+.+|||.++
T Consensus       247 G~~~~~~~~~~~  258 (259)
T PRK08213        247 GQILAVDGGVSA  258 (259)
T ss_pred             CCEEEECCCeec
Confidence            999999999753

>PRK08628 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-40  Score=276.46  Aligned_cols=243  Identities=29%  Similarity=0.344  Sum_probs=208.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+.. +..+++...+.++.++.+|+++.++++++++++.+.+ +++|
T Consensus         8 ~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id   85 (258)
T PRK08628          8 KVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKF-GRID   85 (258)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc-CCCC
Confidence            6899999999999999999999999999999998876 5666666666688999999999999999999999988 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||......+.+.+ ++|++.+++|+.+++.+++.++|+|.+. .++|+++||..+..+.+++..|++||++++++
T Consensus        86 ~vi~~ag~~~~~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~  163 (258)
T PRK08628         86 GLVNNAGVNDGVGLEAGR-EAFVASLERNLIHYYVMAHYCLPHLKAS-RGAIVNISSKTALTGQGGTSGYAAAKGAQLAL  163 (258)
T ss_pred             EEEECCcccCCCcccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhcc-CcEEEEECCHHhccCCCCCchhHHHHHHHHHH
Confidence            999999976554555444 9999999999999999999999998765 58999999999999989999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcC-CCCchHHHHhhhhcCCCC-CCCCHHHHHHHHHHHhCCCCCCccccE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE-GPEGSEFLDGIARQTPIG-RAGEPDEVSSLVAFLCLPAASYITGQI  238 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~va~~~~~l~~~~~~~~~G~~  238 (259)
                      +++++.|+.++||+++.|+||+++|++...... ...............|.+ +..+|+|++++++|++++.+.+++|+.
T Consensus       164 ~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~  243 (258)
T PRK08628        164 TREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAVFLLSERSSHTTGQW  243 (258)
T ss_pred             HHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCCHHHHHHHHHHHhChhhccccCce
Confidence            999999999999999999999999998643211 111112233334445654 788999999999999999889999999


Q ss_pred             EEeCCCcee
Q 024994          239 ICVDGGVTV  247 (259)
Q Consensus       239 l~~dgG~~~  247 (259)
                      +.+|||++.
T Consensus       244 ~~~~gg~~~  252 (258)
T PRK08628        244 LFVDGGYVH  252 (258)
T ss_pred             EEecCCccc
Confidence            999999765

>PRK06701 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-40  Score=278.81  Aligned_cols=240  Identities=33%  Similarity=0.489  Sum_probs=210.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChh-HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI-ELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||++|||.+++++|+++|++|++++|+.+ ..+.....+...+.++.++.+|++|.++++++++++.+.+ +++
T Consensus        47 k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~-~~i  125 (290)
T PRK06701         47 KVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVREL-GRL  125 (290)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc-CCC
Confidence            68999999999999999999999999999999864 3445555555546678899999999999999999999988 689


Q ss_pred             cEEEEcCCCCCC-CCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           80 NILINNAAIAFV-KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        80 d~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      |+||||||.... .++.+.+.++|++++++|+.+++.+++++++.|.+  .+++|++||..+..+.+.+..|++||++++
T Consensus       126 D~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~--~g~iV~isS~~~~~~~~~~~~Y~~sK~a~~  203 (290)
T PRK06701        126 DILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ--GSAIINTGSITGYEGNETLIDYSATKGAIH  203 (290)
T ss_pred             CEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh--CCeEEEEecccccCCCCCcchhHHHHHHHH
Confidence            999999998643 56778899999999999999999999999999854  379999999999999899999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI  238 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~  238 (259)
                      +++++++.++.++||++++|+||+++|++......    ....+.+....+.+++.+++|++++++|++++.+.+++|+.
T Consensus       204 ~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~----~~~~~~~~~~~~~~~~~~~~dva~~~~~ll~~~~~~~~G~~  279 (290)
T PRK06701        204 AFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFD----EEKVSQFGSNTPMQRPGQPEELAPAYVFLASPDSSYITGQM  279 (290)
T ss_pred             HHHHHHHHHhhhcCeEEEEEecCCCCCcccccccC----HHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCcccCCccCcE
Confidence            99999999999999999999999999998654321    12344455677889999999999999999999899999999


Q ss_pred             EEeCCCcee
Q 024994          239 ICVDGGVTV  247 (259)
Q Consensus       239 l~~dgG~~~  247 (259)
                      +.+|||..+
T Consensus       280 i~idgg~~~  288 (290)
T PRK06701        280 LHVNGGVIV  288 (290)
T ss_pred             EEeCCCccc
Confidence            999999754

>PRK12742 oxidoreductase; Provisional

Probab=100.00  E-value=3.8e-40  Score=270.31  Aligned_cols=228  Identities=29%  Similarity=0.415  Sum_probs=194.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeC-ChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSR-NQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||+||||++++++|+++|++|+++.+ +.+..+++..+.     .+.++.+|++|.+++.+.+++    + +++
T Consensus         7 k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~-----~~~~~~~D~~~~~~~~~~~~~----~-~~i   76 (237)
T PRK12742          7 KKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET-----GATAVQTDSADRDAVIDVVRK----S-GAL   76 (237)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh-----CCeEEecCCCCHHHHHHHHHH----h-CCC
Confidence            68999999999999999999999999988876 445544443332     356778999999988777653    3 689


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCcc-CCCCCChhhhhhHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV-RGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~-~~~~~~~~Y~~sK~a~~  158 (259)
                      |++|||||.....+..+.+.++|++++++|+.+++.+++.+.+.|.+  .+++|++||..+. .+.++...|+++|++++
T Consensus        77 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y~~sKaa~~  154 (237)
T PRK12742         77 DILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPE--GGRIIIIGSVNGDRMPVAGMAAYAASKSALQ  154 (237)
T ss_pred             cEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhc--CCeEEEEeccccccCCCCCCcchHHhHHHHH
Confidence            99999999876667778899999999999999999999999999854  4899999998874 57788999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI  238 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~  238 (259)
                      +++++++.++.++||+||.|+||+++|++.....      ...+......|.+|+.+|+|+++.+.||+++.+.+++|+.
T Consensus       155 ~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~------~~~~~~~~~~~~~~~~~p~~~a~~~~~l~s~~~~~~~G~~  228 (237)
T PRK12742        155 GMARGLARDFGPRGITINVVQPGPIDTDANPANG------PMKDMMHSFMAIKRHGRPEEVAGMVAWLAGPEASFVTGAM  228 (237)
T ss_pred             HHHHHHHHHHhhhCeEEEEEecCcccCCcccccc------HHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCcccCCE
Confidence            9999999999999999999999999999864321      1233444567889999999999999999999999999999


Q ss_pred             EEeCCCce
Q 024994          239 ICVDGGVT  246 (259)
Q Consensus       239 l~~dgG~~  246 (259)
                      +.+|||+.
T Consensus       229 ~~~dgg~~  236 (237)
T PRK12742        229 HTIDGAFG  236 (237)
T ss_pred             EEeCCCcC
Confidence            99999964

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=5.3e-40  Score=271.26  Aligned_cols=240  Identities=31%  Similarity=0.421  Sum_probs=206.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEee-CChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCS-RNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||++|||.+++++|+++|++|+++. |+.+.++....++...+.++.++++|+++.++++++++++.+.+ +++
T Consensus         3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~i   81 (248)
T PRK06947          3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAF-GRL   81 (248)
T ss_pred             cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhc-CCC
Confidence            6899999999999999999999999998764 67677777777776666689999999999999999999998888 689


Q ss_pred             cEEEEcCCCCCC-CCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC---CCEEEEecCCCccCCCCC-ChhhhhhH
Q 024994           80 NILINNAAIAFV-KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG---NGSIVFISSVGGVRGIPS-VSLYGAYK  154 (259)
Q Consensus        80 d~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~~~ii~isS~~~~~~~~~-~~~Y~~sK  154 (259)
                      |++|||||.... .++.+.+.+++++++++|+.+++.+++.+++.|..++   .++||++||..+..+.+. +..|++||
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~~Y~~sK  161 (248)
T PRK06947         82 DALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGSK  161 (248)
T ss_pred             CEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCCCcccHhhH
Confidence            999999998644 4567788999999999999999999999999887553   478999999988887664 57899999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 024994          155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYI  234 (259)
Q Consensus       155 ~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~  234 (259)
                      +++++++++++.++.+.||+|+.++||+++|++......    ...........|.++..+++|+++.++|++++.+.++
T Consensus       162 ~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~e~va~~~~~l~~~~~~~~  237 (248)
T PRK06947        162 GAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQ----PGRAARLGAQTPLGRAGEADEVAETIVWLLSDAASYV  237 (248)
T ss_pred             HHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCC----HHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCccccCc
Confidence            999999999999999999999999999999998643211    1122344456678888999999999999999888999


Q ss_pred             cccEEEeCCCc
Q 024994          235 TGQIICVDGGV  245 (259)
Q Consensus       235 ~G~~l~~dgG~  245 (259)
                      +|+++.+|||.
T Consensus       238 ~G~~~~~~gg~  248 (248)
T PRK06947        238 TGALLDVGGGR  248 (248)
T ss_pred             CCceEeeCCCC
Confidence            99999999984

>PRK06138 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.7e-40  Score=271.16  Aligned_cols=245  Identities=31%  Similarity=0.422  Sum_probs=215.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+|+||.+++++|+++|++|++++|+.+..+....++. .+.++.++++|++|.++++++++++.+.+ +++|
T Consensus         6 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~-~~id   83 (252)
T PRK06138          6 RVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA-AGGRAFARQGDVGSAEAVEALVDFVAARW-GRLD   83 (252)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHHc-CCCC
Confidence            689999999999999999999999999999999888777666665 45578999999999999999999999998 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||+|.....++.+.+.+++++++++|+.+++.+++.+++.|++.+.++|+++||..+..+.++...|+.+|++++.+
T Consensus        84 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~~~  163 (252)
T PRK06138         84 VLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKGAIASL  163 (252)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCCccHHHHHHHHHHHH
Confidence            99999998877778888999999999999999999999999999887789999999999998989999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCC-chHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPE-GSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      +++++.++.+.|+++++++||+++|++......... .+..........+.+++.+++|+++++++++++...+++|+.+
T Consensus       164 ~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~  243 (252)
T PRK06138        164 TRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAALFLASDESSFATGTTL  243 (252)
T ss_pred             HHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEE
Confidence            999999999899999999999999998765432221 1222233334556777889999999999999988899999999


Q ss_pred             EeCCCcee
Q 024994          240 CVDGGVTV  247 (259)
Q Consensus       240 ~~dgG~~~  247 (259)
                      .+|||.+.
T Consensus       244 ~~~~g~~~  251 (252)
T PRK06138        244 VVDGGWLA  251 (252)
T ss_pred             EECCCeec
Confidence            99999753

>PRK12937 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.4e-40  Score=270.63  Aligned_cols=238  Identities=28%  Similarity=0.423  Sum_probs=211.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChh-HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI-ELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||+++||++++++|+++|++|+++.|+.+ ..+...+++...+.++.++++|+++.++++++++++.+.+ +++
T Consensus         6 ~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~i   84 (245)
T PRK12937          6 KVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAF-GRI   84 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc-CCC
Confidence            68999999999999999999999999988877544 4555666666666789999999999999999999999998 789


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      |++|||||.....++.+.+.+++++++++|+.+++.++++++|.|.+  .+++|++||..+..+.+++..|+++|++++.
T Consensus        85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~  162 (245)
T PRK12937         85 DVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQ--GGRIINLSTSVIALPLPGYGPYAASKAAVEG  162 (245)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc--CcEEEEEeeccccCCCCCCchhHHHHHHHHH
Confidence            99999999877777888899999999999999999999999999854  4899999999998899999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      ++++++.++.+.||+++.++||+++|++.....    .......+....|.++..+++|+++.+.|++++.+.+++|+.+
T Consensus       163 ~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~  238 (245)
T PRK12937        163 LVHVLANELRGRGITVNAVAPGPVATELFFNGK----SAEQIDQLAGLAPLERLGTPEEIAAAVAFLAGPDGAWVNGQVL  238 (245)
T ss_pred             HHHHHHHHhhhcCeEEEEEEeCCccCchhcccC----CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCccccEE
Confidence            999999999999999999999999999863321    1224556667789999999999999999999988899999999


Q ss_pred             EeCCCc
Q 024994          240 CVDGGV  245 (259)
Q Consensus       240 ~~dgG~  245 (259)
                      ++|||.
T Consensus       239 ~~~~g~  244 (245)
T PRK12937        239 RVNGGF  244 (245)
T ss_pred             EeCCCC
Confidence            999985

>PRK08278 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-40  Score=276.28  Aligned_cols=239  Identities=24%  Similarity=0.293  Sum_probs=207.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhH-------HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE-------LDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTS   73 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   73 (259)
                      |++|||||++|||.+++++|+++|++|++++|+.+.       +++..+++...+.++.++++|+++.+++.++++++.+
T Consensus         7 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   86 (273)
T PRK08278          7 KTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKAVE   86 (273)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            689999999999999999999999999999997653       3445555655566899999999999999999999999


Q ss_pred             HcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCC--CCChhhh
Q 024994           74 IFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI--PSVSLYG  151 (259)
Q Consensus        74 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~--~~~~~Y~  151 (259)
                      .+ +++|+||||||.....+..+.+.++|++++++|+.+++.++++++|+|.+++.++|+++||..+..+.  +++..|+
T Consensus        87 ~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y~  165 (273)
T PRK08278         87 RF-GGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWFAPHTAYT  165 (273)
T ss_pred             Hh-CCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccccccCCcchhH
Confidence            88 68999999999877778888999999999999999999999999999988777899999998887776  7889999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEeCC-ceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 024994          152 AYKGAMNQLTKNLACEWAKDNIRTNTVAPW-VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPA  230 (259)
Q Consensus       152 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  230 (259)
                      +||+++++++++++.|+.++||+||+|+|| +++|++.......            ..+.+++.+|+++++.+++++++.
T Consensus       166 ~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~~~~------------~~~~~~~~~p~~va~~~~~l~~~~  233 (273)
T PRK08278        166 MAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNLLGG------------DEAMRRSRTPEIMADAAYEILSRP  233 (273)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhcccc------------cccccccCCHHHHHHHHHHHhcCc
Confidence            999999999999999999999999999999 6888865443211            124557789999999999999988


Q ss_pred             CCCccccEEEeCCCceeeecccc
Q 024994          231 ASYITGQIICVDGGVTVTVNVNG  253 (259)
Q Consensus       231 ~~~~~G~~l~~dgG~~~~~~~~~  253 (259)
                      +.+++|+.+ +|++....-+...
T Consensus       234 ~~~~~G~~~-~~~~~~~~~~~~~  255 (273)
T PRK08278        234 AREFTGNFL-IDEEVLREAGVTD  255 (273)
T ss_pred             cccceeEEE-eccchhhccCcch
Confidence            889999977 7888765544443

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=100.00  E-value=5.5e-40  Score=274.27  Aligned_cols=240  Identities=27%  Similarity=0.345  Sum_probs=196.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeC-ChhHHHHHHHHHHhc-CCcEEEEEecCCCHHHH----HHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSR-NQIELDARLHEWKNK-GFKVTGSVCDLSSREQR----EKLIETVTSI   74 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~----~~~~~~~~~~   74 (259)
                      +++|||||++|||++++++|+++|++|++++| +.+.++...+++... +.++.++.+|++|.+++    +++++++.+.
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            58999999999999999999999999999865 456676666666432 44677889999999866    4555555566


Q ss_pred             cCCCccEEEEcCCCCCCCCCCCCCH-----------HHHHHHHHHhhHhHHHHHHHHHHHhHhC------CCCEEEEecC
Q 024994           75 FQGKLNILINNAAIAFVKPTVDITA-----------EDMSTVSSTNFESVFHLSQLAHPLFKAS------GNGSIVFISS  137 (259)
Q Consensus        75 ~~~~id~vi~~ag~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~~~~ii~isS  137 (259)
                      + +++|+||||||.....++.+.+.           ++|++++++|+.+++.++++++|+|...      ..++|++++|
T Consensus        82 ~-g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s  160 (267)
T TIGR02685        82 F-GRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCD  160 (267)
T ss_pred             c-CCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehh
Confidence            7 68999999999865555544333           3689999999999999999999998643      2468999999


Q ss_pred             CCccCCCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCC-CCCCH
Q 024994          138 VGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIG-RAGEP  216 (259)
Q Consensus       138 ~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  216 (259)
                      ..+..+.+++.+|++||+++++|+++++.|+.+.||+|+.|+||+++|+....       ....+.+....|++ +..+|
T Consensus       161 ~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~  233 (267)
T TIGR02685       161 AMTDQPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMP-------FEVQEDYRRKVPLGQREASA  233 (267)
T ss_pred             hhccCCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccc-------hhHHHHHHHhCCCCcCCCCH
Confidence            99988889999999999999999999999999999999999999998763211       11233344455664 68899


Q ss_pred             HHHHHHHHHHhCCCCCCccccEEEeCCCceee
Q 024994          217 DEVSSLVAFLCLPAASYITGQIICVDGGVTVT  248 (259)
Q Consensus       217 ~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~  248 (259)
                      +|+++.++|++++.+.+++|+.+.+|||..++
T Consensus       234 ~~va~~~~~l~~~~~~~~~G~~~~v~gg~~~~  265 (267)
T TIGR02685       234 EQIADVVIFLVSPKAKYITGTCIKVDGGLSLT  265 (267)
T ss_pred             HHHHHHHHHHhCcccCCcccceEEECCceecc
Confidence            99999999999988999999999999998765

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=7.2e-40  Score=272.46  Aligned_cols=246  Identities=28%  Similarity=0.359  Sum_probs=214.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+|+||++++++|+++|++|++++|+++..++..+++...+.++.++++|++|.++++++++++.+.+ +++|
T Consensus         8 ~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~~d   86 (262)
T PRK13394          8 KTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERF-GSVD   86 (262)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHc-CCCC
Confidence            689999999999999999999999999999999988888888877666678899999999999999999998888 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHh-HhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLF-KASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      +||||||....++..+.+.+++++++++|+.+++.+++.+++.| .+.+.++||++||..+..+.+....|+++|+++++
T Consensus        87 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~sk~a~~~  166 (262)
T PRK13394         87 ILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLG  166 (262)
T ss_pred             EEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCCCcccHHHHHHHHH
Confidence            99999999877777788899999999999999999999999999 66667899999999998888888999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCC------CchHHH-HhhhhcCCCCCCCCHHHHHHHHHHHhCCCCC
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGP------EGSEFL-DGIARQTPIGRAGEPDEVSSLVAFLCLPAAS  232 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~------~~~~~~-~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  232 (259)
                      ++++++.++.+.+|+++.++||+++|++........      ..+... ..+....+.+++.+++|++++++++++..+.
T Consensus       167 ~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~~~~~  246 (262)
T PRK13394        167 LARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQTVLFLSSFPSA  246 (262)
T ss_pred             HHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHcCcccc
Confidence            999999999888999999999999999764332110      111111 2223355667899999999999999987778


Q ss_pred             CccccEEEeCCCcee
Q 024994          233 YITGQIICVDGGVTV  247 (259)
Q Consensus       233 ~~~G~~l~~dgG~~~  247 (259)
                      .++|+.+++|+|+.+
T Consensus       247 ~~~g~~~~~~~g~~~  261 (262)
T PRK13394        247 ALTGQSFVVSHGWFM  261 (262)
T ss_pred             CCcCCEEeeCCceec
Confidence            899999999999754

>PRK06123 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-39  Score=268.49  Aligned_cols=240  Identities=30%  Similarity=0.389  Sum_probs=206.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEee-CChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCS-RNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||+++||.+++++|+++|++|+++. |+.+..+....++...+.++.++++|++|.++++++++++.+.+ +++
T Consensus         3 ~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~i   81 (248)
T PRK06123          3 KVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDREL-GRL   81 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHh-CCC
Confidence            6899999999999999999999999998887 45555666666665556678899999999999999999999988 789


Q ss_pred             cEEEEcCCCCCC-CCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC---CCEEEEecCCCccCCCCC-ChhhhhhH
Q 024994           80 NILINNAAIAFV-KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG---NGSIVFISSVGGVRGIPS-VSLYGAYK  154 (259)
Q Consensus        80 d~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~~~ii~isS~~~~~~~~~-~~~Y~~sK  154 (259)
                      |+||||||.... .++.+.+.++|++++++|+.+++.+++.+++.|.++.   .++||++||..+..+.+. +..|+++|
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~Y~~sK  161 (248)
T PRK06123         82 DALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAASK  161 (248)
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCCccchHHHH
Confidence            999999998654 4567788999999999999999999999999997542   478999999998888776 46799999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 024994          155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYI  234 (259)
Q Consensus       155 ~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~  234 (259)
                      +++++|+++++.++.++||+++.|+||+++|++.....    .......+....|+++..+++|+++++.|++++...++
T Consensus       162 aa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~----~~~~~~~~~~~~p~~~~~~~~d~a~~~~~l~~~~~~~~  237 (248)
T PRK06123        162 GAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGG----EPGRVDRVKAGIPMGRGGTAEEVARAILWLLSDEASYT  237 (248)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccC----CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCc
Confidence            99999999999999999999999999999999764321    11234456667788999999999999999999888899


Q ss_pred             cccEEEeCCCc
Q 024994          235 TGQIICVDGGV  245 (259)
Q Consensus       235 ~G~~l~~dgG~  245 (259)
                      +|+.+++|||.
T Consensus       238 ~g~~~~~~gg~  248 (248)
T PRK06123        238 TGTFIDVSGGR  248 (248)
T ss_pred             cCCEEeecCCC
Confidence            99999999974

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=100.00  E-value=1.7e-39  Score=267.51  Aligned_cols=238  Identities=33%  Similarity=0.423  Sum_probs=210.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+|+||++++++|+++|+.|++.+|+.++++....++   +.++.++.+|+++.++++++++++.+.+ +++|
T Consensus         7 ~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id   82 (245)
T PRK12936          7 RKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL---GERVKIFPANLSDRDEVKALGQKAEADL-EGVD   82 (245)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence            68999999999999999999999999999999988877655443   3468889999999999999999999988 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      ++|||||.....+..+.+.++|++++++|+.+++.+++++.+.+.+++.+++|++||..+..+.+.+..|+++|++++++
T Consensus        83 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sk~a~~~~  162 (245)
T PRK12936         83 ILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQANYCASKAGMIGF  162 (245)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCCcchHHHHHHHHHH
Confidence            99999998776777788899999999999999999999999988776779999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC  240 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~  240 (259)
                      ++.++.++.+.|++++.++||+++|++.....     +...+......|..++.+|+|+++++.|++++...+++|+++.
T Consensus       163 ~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~~~~~~~~~G~~~~  237 (245)
T PRK12936        163 SKSLAQEIATRNVTVNCVAPGFIESAMTGKLN-----DKQKEAIMGAIPMKRMGTGAEVASAVAYLASSEAAYVTGQTIH  237 (245)
T ss_pred             HHHHHHHhhHhCeEEEEEEECcCcCchhcccC-----hHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCccccCcCCCEEE
Confidence            99999999989999999999999998765431     1122334456788889999999999999998877899999999


Q ss_pred             eCCCcee
Q 024994          241 VDGGVTV  247 (259)
Q Consensus       241 ~dgG~~~  247 (259)
                      +|||..+
T Consensus       238 ~~~g~~~  244 (245)
T PRK12936        238 VNGGMAM  244 (245)
T ss_pred             ECCCccc
Confidence            9999754

>PRK05872 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.4e-40  Score=277.00  Aligned_cols=231  Identities=19%  Similarity=0.261  Sum_probs=203.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+.+++..+++.. +..+..+++|++|.++++++++++.+.+ +++|
T Consensus        10 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~id   87 (296)
T PRK05872         10 KVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG-DDRVLTVVADVTDLAAMQAAAEEAVERF-GGID   87 (296)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC-CCcEEEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence            6899999999999999999999999999999999988887777643 4467778899999999999999999988 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||+....++.+.+.++|++++++|+.+++.+++.++|+|.+. .++||++||..+..+.+.+..|++||+++++|
T Consensus        88 ~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaal~~~  166 (296)
T PRK05872         88 VVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER-RGYVLQVSSLAAFAAAPGMAAYCASKAGVEAF  166 (296)
T ss_pred             EEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCEEEEEeCHhhcCCCCCchHHHHHHHHHHHH
Confidence            99999999877888899999999999999999999999999999765 58999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhc--CCCCCCCCHHHHHHHHHHHhCCCCCCcccc
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQ--TPIGRAGEPDEVSSLVAFLCLPAASYITGQ  237 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~va~~~~~l~~~~~~~~~G~  237 (259)
                      +++++.|+.++||++++++||+++|++........   .....+...  .|.++..+++|+++.+.+++++...++++.
T Consensus       167 ~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~---~~~~~~~~~~~~p~~~~~~~~~va~~i~~~~~~~~~~i~~~  242 (296)
T PRK05872        167 ANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADL---PAFRELRARLPWPLRRTTSVEKCAAAFVDGIERRARRVYAP  242 (296)
T ss_pred             HHHHHHHHHHHCcEEEEEecCcccchhhhhccccc---hhHHHHHhhCCCcccCCCCHHHHHHHHHHHHhcCCCEEEch
Confidence            99999999999999999999999999876543221   122333333  367888999999999999999887777765

>PRK12744 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.8e-40  Score=271.52  Aligned_cols=242  Identities=24%  Similarity=0.363  Sum_probs=195.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCC----hhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRN----QIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ   76 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (259)
                      |++|||||++|||++++++|+++|++|+++.++    .+..++..+++...+.++.++++|+++.++++++++++.+.+ 
T Consensus         9 k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   87 (257)
T PRK12744          9 KVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAAF-   87 (257)
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHhh-
Confidence            689999999999999999999999997766543    344555555665555678899999999999999999999988 


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHH
Q 024994           77 GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGA  156 (259)
Q Consensus        77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  156 (259)
                      +++|++|||||.....++.+.+.+++++++++|+.+++.+++++.|.|.+.  +++++++|.....+.+.+..|++||++
T Consensus        88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~--~~iv~~~ss~~~~~~~~~~~Y~~sK~a  165 (257)
T PRK12744         88 GRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDN--GKIVTLVTSLLGAFTPFYSAYAGSKAP  165 (257)
T ss_pred             CCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC--CCEEEEecchhcccCCCcccchhhHHH
Confidence            689999999998777788888999999999999999999999999998643  677776443322345778899999999


Q ss_pred             HHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCC--CCCCHHHHHHHHHHHhCCCCCCc
Q 024994          157 MNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIG--RAGEPDEVSSLVAFLCLPAASYI  234 (259)
Q Consensus       157 ~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~va~~~~~l~~~~~~~~  234 (259)
                      +++|+++++.|+.++||+|+.++||++.|++...... +.............+..  ++.+|+|+++++.|++++ ..++
T Consensus       166 ~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~-~~~~  243 (257)
T PRK12744        166 VEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEG-AEAVAYHKTAAALSPFSKTGLTDIEDIVPFIRFLVTD-GWWI  243 (257)
T ss_pred             HHHHHHHHHHHhCcCceEEEEEecCccccchhccccc-cchhhcccccccccccccCCCCCHHHHHHHHHHhhcc-ccee
Confidence            9999999999999999999999999999998643221 11000111122233443  788999999999999995 6789


Q ss_pred             cccEEEeCCCcee
Q 024994          235 TGQIICVDGGVTV  247 (259)
Q Consensus       235 ~G~~l~~dgG~~~  247 (259)
                      +|+++.+|||..+
T Consensus       244 ~g~~~~~~gg~~~  256 (257)
T PRK12744        244 TGQTILINGGYTT  256 (257)
T ss_pred             ecceEeecCCccC
Confidence            9999999999764

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=2.6e-39  Score=266.98  Aligned_cols=239  Identities=34%  Similarity=0.488  Sum_probs=209.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeC-ChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSR-NQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||+++||.+++++|+++|++|+++.+ +.+..++..+++.+.+.++.++++|++|.++++++++++.+.+ +++
T Consensus         7 ~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i   85 (247)
T PRK12935          7 KVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHF-GKV   85 (247)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc-CCC
Confidence            68999999999999999999999999987654 5566666666676656679999999999999999999999988 689


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      |+||||||.....++.+.+.+++++++++|+.+++.++++++|.|.+.+.+++|++||..+..+.+++..|+++|+++++
T Consensus        86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  165 (247)
T PRK12935         86 DILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKAGMLG  165 (247)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCCCcchHHHHHHHHH
Confidence            99999999987777778889999999999999999999999999987777899999999998888899999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      ++++++.++.+.||+++.++||+++|++......     ..........+.+++..|+|++++++++++. ..+++|+.+
T Consensus       166 ~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~-----~~~~~~~~~~~~~~~~~~edva~~~~~~~~~-~~~~~g~~~  239 (247)
T PRK12935        166 FTKSLALELAKTNVTVNAICPGFIDTEMVAEVPE-----EVRQKIVAKIPKKRFGQADEIAKGVVYLCRD-GAYITGQQL  239 (247)
T ss_pred             HHHHHHHHHHHcCcEEEEEEeCCCcChhhhhccH-----HHHHHHHHhCCCCCCcCHHHHHHHHHHHcCc-ccCccCCEE
Confidence            9999999998899999999999999987654321     1334445566777899999999999999975 458999999


Q ss_pred             EeCCCce
Q 024994          240 CVDGGVT  246 (259)
Q Consensus       240 ~~dgG~~  246 (259)
                      ++|||..
T Consensus       240 ~i~~g~~  246 (247)
T PRK12935        240 NINGGLY  246 (247)
T ss_pred             EeCCCcc
Confidence            9999963

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.2e-39  Score=264.69  Aligned_cols=212  Identities=28%  Similarity=0.377  Sum_probs=190.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      ++||||||++|||+++|.+|+++|+.+++.|.|.+..++..+++...| +++.+.||+++.+++.+..+++++.. |++|
T Consensus        39 ~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis~~eei~~~a~~Vk~e~-G~V~  116 (300)
T KOG1201|consen   39 EIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDISDREEIYRLAKKVKKEV-GDVD  116 (300)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEecCCCHHHHHHHHHHHHHhc-CCce
Confidence            589999999999999999999999999999999999999999988765 89999999999999999999999999 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||+....++.+.+.+++++++++|+.+++..+|+++|.|.+.+.|+||.|+|.+|..+.++...|++||+|+.+|
T Consensus       117 ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl~~YcaSK~a~vGf  196 (300)
T KOG1201|consen  117 ILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGLADYCASKFAAVGF  196 (300)
T ss_pred             EEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccchhhhhhHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHcc---CCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHh
Q 024994          161 TKNLACEWAK---DNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLC  227 (259)
Q Consensus       161 ~~~~a~e~~~---~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  227 (259)
                      .+++..|+..   +||+...++|+.++|+|.....+.+             .+-...+|+++++.++.-+
T Consensus       197 hesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~~~~~~-------------~l~P~L~p~~va~~Iv~ai  253 (300)
T KOG1201|consen  197 HESLSMELRALGKDGIKTTLVCPYFINTGMFDGATPFP-------------TLAPLLEPEYVAKRIVEAI  253 (300)
T ss_pred             HHHHHHHHHhcCCCCeeEEEEeeeeccccccCCCCCCc-------------cccCCCCHHHHHHHHHHHH
Confidence            9999999744   5799999999999999987511111             1122446777777665444

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.8e-39  Score=276.14  Aligned_cols=238  Identities=29%  Similarity=0.389  Sum_probs=202.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCCh-hHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ-IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||++|||++++++|+++|++|++++++. +..++..+++...+.++.++++|++|.++++++++++.+ + +++
T Consensus        13 k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~-~-g~i   90 (306)
T PRK07792         13 KVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVG-L-GGL   90 (306)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH-h-CCC
Confidence            7899999999999999999999999999998854 456666777766677899999999999999999999998 8 799


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC-------CCCEEEEecCCCccCCCCCChhhhh
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-------GNGSIVFISSVGGVRGIPSVSLYGA  152 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-------~~~~ii~isS~~~~~~~~~~~~Y~~  152 (259)
                      |+||||||+....++.+.+.++|++++++|+.+++.+++++.|+|.++       ..|+||++||..+..+.++...|++
T Consensus        91 D~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  170 (306)
T PRK07792         91 DIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQANYGA  170 (306)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCCCCchHHH
Confidence            999999999877778888999999999999999999999999999753       1379999999999988889999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCC
Q 024994          153 YKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAAS  232 (259)
Q Consensus       153 sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  232 (259)
                      +|+++++|+++++.|+.++||+||+|+|| +.|++......... . ...      ......+|++++..+.||+++.+.
T Consensus       171 sKaal~~l~~~la~e~~~~gI~vn~i~Pg-~~t~~~~~~~~~~~-~-~~~------~~~~~~~pe~va~~v~~L~s~~~~  241 (306)
T PRK07792        171 AKAGITALTLSAARALGRYGVRANAICPR-ARTAMTADVFGDAP-D-VEA------GGIDPLSPEHVVPLVQFLASPAAA  241 (306)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEECCC-CCCchhhhhccccc-h-hhh------hccCCCCHHHHHHHHHHHcCcccc
Confidence            99999999999999999999999999999 47887643321111 0 000      011234799999999999998888


Q ss_pred             CccccEEEeCCCceeee
Q 024994          233 YITGQIICVDGGVTVTV  249 (259)
Q Consensus       233 ~~~G~~l~~dgG~~~~~  249 (259)
                      +++|+++.+|||.....
T Consensus       242 ~~tG~~~~v~gg~~~~~  258 (306)
T PRK07792        242 EVNGQVFIVYGPMVTLV  258 (306)
T ss_pred             CCCCCEEEEcCCeEEEE
Confidence            99999999999976543

>PRK05875 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-39  Score=270.77  Aligned_cols=243  Identities=30%  Similarity=0.400  Sum_probs=213.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++||||++|+||.+++++|+++|++|++++|+.++.+...+++...  +.++.++++|++|+++++++++++.+.+ ++
T Consensus         8 k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~   86 (276)
T PRK05875          8 RTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWH-GR   86 (276)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHc-CC
Confidence            68999999999999999999999999999999988877766666543  3478889999999999999999999988 68


Q ss_pred             ccEEEEcCCCCC-CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHH
Q 024994           79 LNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAM  157 (259)
Q Consensus        79 id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~  157 (259)
                      +|++|||||... .+++.+.+.+++++++++|+.+++.+++++.+.|.+.+.++|+++||..+..+.++...|+++|+++
T Consensus        87 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~  166 (276)
T PRK05875         87 LHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAV  166 (276)
T ss_pred             CCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCCCcchHHHHHHH
Confidence            999999999753 3567778899999999999999999999999999877778999999999888888889999999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcccc
Q 024994          158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ  237 (259)
Q Consensus       158 ~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~  237 (259)
                      +.++++++.++.+.+|+++.|+||+++|++.......   ......+....|.+++++++|+++++.|+++....+++|+
T Consensus       167 ~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~  243 (276)
T PRK05875        167 DHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITES---PELSADYRACTPLPRVGEVEDVANLAMFLLSDAASWITGQ  243 (276)
T ss_pred             HHHHHHHHHHhcccCeEEEEEecCccCCccccccccC---HHHHHHHHcCCCCCCCcCHHHHHHHHHHHcCchhcCcCCC
Confidence            9999999999999999999999999999987543222   1233444556778899999999999999999888899999


Q ss_pred             EEEeCCCcee
Q 024994          238 IICVDGGVTV  247 (259)
Q Consensus       238 ~l~~dgG~~~  247 (259)
                      ++++|||+.+
T Consensus       244 ~~~~~~g~~~  253 (276)
T PRK05875        244 VINVDGGHML  253 (276)
T ss_pred             EEEECCCeec
Confidence            9999999876

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-39  Score=268.24  Aligned_cols=246  Identities=29%  Similarity=0.374  Sum_probs=216.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++||||++|+||.+++++|+++|++|++++|+.++.+....++...+.++.++.+|++|.++++++++++.+.+ +++|
T Consensus         5 ~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~~d   83 (258)
T PRK12429          5 KVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETF-GGVD   83 (258)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-CCCC
Confidence            689999999999999999999999999999999998888877777667789999999999999999999999988 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||.....+..+.+.+++++++++|+.+++.+++.++|.|.+.+.++||++||..+..+.++...|+++|++++++
T Consensus        84 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~~k~a~~~~  163 (258)
T PRK12429         84 ILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHGLIGL  163 (258)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCcchhHHHHHHHHHH
Confidence            99999998877788888999999999999999999999999999988889999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCC------CC-chHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEG------PE-GSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASY  233 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~------~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  233 (259)
                      ++.++.++.+.+|+++.++||+++|++.......      .. .......+....+.+++.+++|+++++.+++++....
T Consensus       164 ~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~  243 (258)
T PRK12429        164 TKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIADYALFLASFAAKG  243 (258)
T ss_pred             HHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCccccCCHHHHHHHHHHHcCccccC
Confidence            9999999998999999999999999886432111      11 1111122333446678999999999999999887788


Q ss_pred             ccccEEEeCCCcee
Q 024994          234 ITGQIICVDGGVTV  247 (259)
Q Consensus       234 ~~G~~l~~dgG~~~  247 (259)
                      ++|+.+.+|||++.
T Consensus       244 ~~g~~~~~~~g~~~  257 (258)
T PRK12429        244 VTGQAWVVDGGWTA  257 (258)
T ss_pred             ccCCeEEeCCCEec
Confidence            99999999999764

>PRK07774 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-39  Score=266.64  Aligned_cols=240  Identities=30%  Similarity=0.413  Sum_probs=209.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+++||++++++|+++|++|++++|+.+..+...+++...+.++.++.+|++|.++++++++++.+.+ +++|
T Consensus         7 k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~id   85 (250)
T PRK07774          7 KVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAF-GGID   85 (250)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh-CCCC
Confidence            689999999999999999999999999999999888777777766555578889999999999999999999988 6899


Q ss_pred             EEEEcCCCCC---CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHH
Q 024994           81 ILINNAAIAF---VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAM  157 (259)
Q Consensus        81 ~vi~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~  157 (259)
                      +||||||...   ..++.+.+.+++++++++|+.+++.++++++|+|.+.+.++||++||..++.   +...|++||+++
T Consensus        86 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~---~~~~Y~~sK~a~  162 (250)
T PRK07774         86 YLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL---YSNFYGLAKVGL  162 (250)
T ss_pred             EEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC---CccccHHHHHHH
Confidence            9999999864   3456778899999999999999999999999999887789999999987754   457899999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcccc
Q 024994          158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ  237 (259)
Q Consensus       158 ~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~  237 (259)
                      ++++++++.++.+.||+++.++||+++|++.....+    ...........+..+..+++|+++.+++++++...+.+|+
T Consensus       163 ~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~g~  238 (250)
T PRK07774        163 NGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTP----KEFVADMVKGIPLSRMGTPEDLVGMCLFLLSDEASWITGQ  238 (250)
T ss_pred             HHHHHHHHHHhCccCeEEEEEecCcccCccccccCC----HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhhCcCCC
Confidence            999999999999899999999999999998764322    1244455666777888999999999999998766788999


Q ss_pred             EEEeCCCceee
Q 024994          238 IICVDGGVTVT  248 (259)
Q Consensus       238 ~l~~dgG~~~~  248 (259)
                      ++++|+|.++.
T Consensus       239 ~~~v~~g~~~~  249 (250)
T PRK07774        239 IFNVDGGQIIR  249 (250)
T ss_pred             EEEECCCeecc
Confidence            99999998875

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1e-39  Score=267.53  Aligned_cols=228  Identities=32%  Similarity=0.397  Sum_probs=196.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+++|||+++|||++++++|+++|++|++++|+....         ...++.++.+|++++      ++++.+.+ +++|
T Consensus         6 k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~---------~~~~~~~~~~D~~~~------~~~~~~~~-~~id   69 (235)
T PRK06550          6 KTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD---------LSGNFHFLQLDLSDD------LEPLFDWV-PSVD   69 (235)
T ss_pred             CEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc---------cCCcEEEEECChHHH------HHHHHHhh-CCCC
Confidence            6899999999999999999999999999999975432         123688899999987      34444445 6899


Q ss_pred             EEEEcCCCCC-CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      ++|||||... ..++.+.+.+++++++++|+.+++.++++++|.|.+++.++||++||..+..+.++...|+++|+++++
T Consensus        70 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  149 (235)
T PRK06550         70 ILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHALAG  149 (235)
T ss_pred             EEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcccHHHHHHHHH
Confidence            9999999763 356778899999999999999999999999999988778999999999999988899999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      ++++++.++.++||+++.|+||+++|++.......   ...........|.+++.+|+|++++++|++++.+.+++|+++
T Consensus       150 ~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~g~~~  226 (235)
T PRK06550        150 FTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEP---GGLADWVARETPIKRWAEPEEVAELTLFLASGKADYMQGTIV  226 (235)
T ss_pred             HHHHHHHHhhhcCeEEEEEeeCCccCcccccccCc---hHHHHHHhccCCcCCCCCHHHHHHHHHHHcChhhccCCCcEE
Confidence            99999999999999999999999999986433221   123344556778999999999999999999988899999999


Q ss_pred             EeCCCcee
Q 024994          240 CVDGGVTV  247 (259)
Q Consensus       240 ~~dgG~~~  247 (259)
                      .+|||..+
T Consensus       227 ~~~gg~~~  234 (235)
T PRK06550        227 PIDGGWTL  234 (235)
T ss_pred             EECCceec
Confidence            99999754

>PRK09186 flagellin modification protein A; Provisional

Probab=100.00  E-value=3.3e-39  Score=267.72  Aligned_cols=236  Identities=30%  Similarity=0.358  Sum_probs=202.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||++|||+++|++|+++|++|++++|+.++.+...+++...  ...+.++++|++|.+++.++++++.+.+ ++
T Consensus         5 k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~-~~   83 (256)
T PRK09186          5 KTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY-GK   83 (256)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc-CC
Confidence            78999999999999999999999999999999998888777777432  3356677999999999999999999988 68


Q ss_pred             ccEEEEcCCCCC---CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCC----------
Q 024994           79 LNILINNAAIAF---VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIP----------  145 (259)
Q Consensus        79 id~vi~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~----------  145 (259)
                      +|+|||||+...   ..++.+.+.+++++++++|+.+++.++++++|+|.+++.++||++||..+..+..          
T Consensus        84 id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~  163 (256)
T PRK09186         84 IDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTSMT  163 (256)
T ss_pred             ccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhccccccC
Confidence            999999998642   2467788999999999999999999999999999887778999999987654321          


Q ss_pred             CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHH
Q 024994          146 SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAF  225 (259)
Q Consensus       146 ~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~  225 (259)
                      ....|++||+++++++++++.++.+.||+++.++||++.++..         ......+....+.+++.+|+|+++++++
T Consensus       164 ~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~---------~~~~~~~~~~~~~~~~~~~~dva~~~~~  234 (256)
T PRK09186        164 SPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQP---------EAFLNAYKKCCNGKGMLDPDDICGTLVF  234 (256)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCC---------HHHHHHHHhcCCccCCCCHHHhhhhHhh
Confidence            2247999999999999999999999999999999999877531         1133444455667788999999999999


Q ss_pred             HhCCCCCCccccEEEeCCCce
Q 024994          226 LCLPAASYITGQIICVDGGVT  246 (259)
Q Consensus       226 l~~~~~~~~~G~~l~~dgG~~  246 (259)
                      ++++...+++|+.+.+|||++
T Consensus       235 l~~~~~~~~~g~~~~~~~g~~  255 (256)
T PRK09186        235 LLSDQSKYITGQNIIVDDGFS  255 (256)
T ss_pred             eeccccccccCceEEecCCcc
Confidence            999888999999999999975

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=2e-39  Score=294.65  Aligned_cols=241  Identities=34%  Similarity=0.536  Sum_probs=211.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++||||+++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++++|++|.++++++++++.+.+ +++|
T Consensus         6 k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~iD   81 (520)
T PRK06484          6 RVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL---GPDHHALAMDVSDEAQIREGFEQLHREF-GRID   81 (520)
T ss_pred             eEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEeccCCHHHHHHHHHHHHHHh-CCCC
Confidence            68999999999999999999999999999999998887766555   4467889999999999999999999999 6899


Q ss_pred             EEEEcCCCCC--CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCC-EEEEecCCCccCCCCCChhhhhhHHHH
Q 024994           81 ILINNAAIAF--VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNG-SIVFISSVGGVRGIPSVSLYGAYKGAM  157 (259)
Q Consensus        81 ~vi~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~-~ii~isS~~~~~~~~~~~~Y~~sK~a~  157 (259)
                      +||||||+..  ..++.+.+.++|++++++|+.+++.++++++|+|.+.+.+ +||++||..+..+.+.+..|+++|+++
T Consensus        82 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~asKaal  161 (520)
T PRK06484         82 VLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAV  161 (520)
T ss_pred             EEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHHHHHHHH
Confidence            9999999842  3567788999999999999999999999999999876555 999999999999999999999999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcccc
Q 024994          158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ  237 (259)
Q Consensus       158 ~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~  237 (259)
                      ++|+++++.|+.+++|+|+.|+||+++|++.........  ..........|.++..+|+++++.+.|++++...+++|+
T Consensus       162 ~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~va~~v~~l~~~~~~~~~G~  239 (520)
T PRK06484        162 ISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGK--LDPSAVRSRIPLGRLGRPEEIAEAVFFLASDQASYITGS  239 (520)
T ss_pred             HHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccch--hhhHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCc
Confidence            999999999999999999999999999998754322111  112333455678888999999999999999988999999


Q ss_pred             EEEeCCCcee
Q 024994          238 IICVDGGVTV  247 (259)
Q Consensus       238 ~l~~dgG~~~  247 (259)
                      .+.+|||+..
T Consensus       240 ~~~~~gg~~~  249 (520)
T PRK06484        240 TLVVDGGWTV  249 (520)
T ss_pred             eEEecCCeec
Confidence            9999999754

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=5.6e-39  Score=266.28  Aligned_cols=241  Identities=32%  Similarity=0.436  Sum_probs=207.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCCh-hHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ-IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||+++||.+++++|+++|++|++++|+. +..+...+.+...+.++.++++|+++++++.++++++.+.+ +++
T Consensus         3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i   81 (256)
T PRK12745          3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAW-GRI   81 (256)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhc-CCC
Confidence            6899999999999999999999999999999864 44455555565556679999999999999999999999998 689


Q ss_pred             cEEEEcCCCCC--CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC------CCEEEEecCCCccCCCCCChhhh
Q 024994           80 NILINNAAIAF--VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG------NGSIVFISSVGGVRGIPSVSLYG  151 (259)
Q Consensus        80 d~vi~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~------~~~ii~isS~~~~~~~~~~~~Y~  151 (259)
                      |++|||||...  ..++.+.+.+++++++++|+.+++.+++++.+.|.++.      .++++++||..+..+.++...|+
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  161 (256)
T PRK12745         82 DCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYC  161 (256)
T ss_pred             CEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCCcccH
Confidence            99999999853  34567788999999999999999999999999998654      35799999999999988999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhh-hcCCCCCCCCHHHHHHHHHHHhCCC
Q 024994          152 AYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIA-RQTPIGRAGEPDEVSSLVAFLCLPA  230 (259)
Q Consensus       152 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~va~~~~~l~~~~  230 (259)
                      ++|+++++++++++.++.++||+++.++||+++|++.......     ....+. ...|..++.+++|+++++.+++++.
T Consensus       162 ~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~d~a~~i~~l~~~~  236 (256)
T PRK12745        162 ISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTAK-----YDALIAKGLVPMPRWGEPEDVARAVAALASGD  236 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccchh-----HHhhhhhcCCCcCCCcCHHHHHHHHHHHhCCc
Confidence            9999999999999999998999999999999999886543211     112222 2457788999999999999999988


Q ss_pred             CCCccccEEEeCCCcee
Q 024994          231 ASYITGQIICVDGGVTV  247 (259)
Q Consensus       231 ~~~~~G~~l~~dgG~~~  247 (259)
                      ..+++|+.+++|||.+.
T Consensus       237 ~~~~~G~~~~i~gg~~~  253 (256)
T PRK12745        237 LPYSTGQAIHVDGGLSI  253 (256)
T ss_pred             ccccCCCEEEECCCeec
Confidence            88999999999999775

>PRK05884 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-39  Score=264.31  Aligned_cols=214  Identities=25%  Similarity=0.281  Sum_probs=181.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+++||||++|||++++++|+++|++|++++|+.++++...+++     ++.++++|++|.++++++++++.    +++|
T Consensus         1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~----~~id   71 (223)
T PRK05884          1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL-----DVDAIVCDNTDPASLEEARGLFP----HHLD   71 (223)
T ss_pred             CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCcEEecCCCCHHHHHHHHHHHh----hcCc
Confidence            57999999999999999999999999999999988877665543     35678899999999999887763    2699


Q ss_pred             EEEEcCCCCCC--C----CCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhH
Q 024994           81 ILINNAAIAFV--K----PTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYK  154 (259)
Q Consensus        81 ~vi~~ag~~~~--~----~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  154 (259)
                      ++|||||....  .    ++.+ +.++|++++++|+.+++.++++++|.|.+  .|+||++||..    .+.+..|++||
T Consensus        72 ~lv~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~Iv~isS~~----~~~~~~Y~asK  144 (223)
T PRK05884         72 TIVNVPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS--GGSIISVVPEN----PPAGSAEAAIK  144 (223)
T ss_pred             EEEECCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCeEEEEecCC----CCCccccHHHH
Confidence            99999985321  1    2333 57899999999999999999999999964  48999999976    35678999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 024994          155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYI  234 (259)
Q Consensus       155 ~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~  234 (259)
                      +++.+|+++++.|+.++|||||+|+||+++|++.....              ..|.   .+|+|+++.+.||+++.+.++
T Consensus       145 aal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~~~--------------~~p~---~~~~~ia~~~~~l~s~~~~~v  207 (223)
T PRK05884        145 AALSNWTAGQAAVFGTRGITINAVACGRSVQPGYDGLS--------------RTPP---PVAAEIARLALFLTTPAARHI  207 (223)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEecCccCchhhhhcc--------------CCCC---CCHHHHHHHHHHHcCchhhcc
Confidence            99999999999999999999999999999998643211              1222   379999999999999999999


Q ss_pred             cccEEEeCCCcee
Q 024994          235 TGQIICVDGGVTV  247 (259)
Q Consensus       235 ~G~~l~~dgG~~~  247 (259)
                      +|+++.+|||...
T Consensus       208 ~G~~i~vdgg~~~  220 (223)
T PRK05884        208 TGQTLHVSHGALA  220 (223)
T ss_pred             CCcEEEeCCCeec
Confidence            9999999999765

>PRK06057 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.3e-39  Score=266.52  Aligned_cols=238  Identities=29%  Similarity=0.407  Sum_probs=204.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||.+++++|+++|++|++++|+....+...+++.     ..++++|+++.++++++++++.+.+ +++|
T Consensus         8 ~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~-----~~~~~~D~~~~~~~~~~~~~~~~~~-~~id   81 (255)
T PRK06057          8 RVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG-----GLFVPTDVTDEDAVNALFDTAAETY-GSVD   81 (255)
T ss_pred             CEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC-----CcEEEeeCCCHHHHHHHHHHHHHHc-CCCC
Confidence            689999999999999999999999999999999877766554432     2578899999999999999999888 6899


Q ss_pred             EEEEcCCCCCC--CCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCC-CCChhhhhhHHHH
Q 024994           81 ILINNAAIAFV--KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI-PSVSLYGAYKGAM  157 (259)
Q Consensus        81 ~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~-~~~~~Y~~sK~a~  157 (259)
                      ++|||||...+  .++.+.+.+++++++++|+.+++.+++.++|+|.+++.++||++||..+..+. +++..|+++|+++
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~~~~Y~~sKaal  161 (255)
T PRK06057         82 IAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTASKGGV  161 (255)
T ss_pred             EEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCCCcchHHHHHHH
Confidence            99999998643  35667789999999999999999999999999987777899999998777765 3678899999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcccc
Q 024994          158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ  237 (259)
Q Consensus       158 ~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~  237 (259)
                      ++++++++.++.++||+++.|+||+++|++........  .....+.....|.+++.+|+|+++++.+++++...+++|+
T Consensus       162 ~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~  239 (255)
T PRK06057        162 LAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKD--PERAARRLVHVPMGRFAEPEEIAAAVAFLASDDASFITAS  239 (255)
T ss_pred             HHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCC--HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCc
Confidence            99999999999999999999999999999876543211  1122233345678899999999999999999989999999


Q ss_pred             EEEeCCCce
Q 024994          238 IICVDGGVT  246 (259)
Q Consensus       238 ~l~~dgG~~  246 (259)
                      .+.+|||..
T Consensus       240 ~~~~~~g~~  248 (255)
T PRK06057        240 TFLVDGGIS  248 (255)
T ss_pred             EEEECCCee
Confidence            999999965

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.8e-39  Score=276.06  Aligned_cols=220  Identities=26%  Similarity=0.335  Sum_probs=195.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++||||||+|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|.++++++++++.+.+ +++|
T Consensus         8 k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD   86 (330)
T PRK06139          8 AVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFG-GRID   86 (330)
T ss_pred             CEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhc-CCCC
Confidence            689999999999999999999999999999999999998888887777788899999999999999999999888 7899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      ++|||||+...+++.+.+.+++++++++|+.+++.+++.++|+|.+++.++||+++|..+..+.|....|++||+++.+|
T Consensus        87 ~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~~~~Y~asKaal~~~  166 (330)
T PRK06139         87 VWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASKFGLRGF  166 (330)
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCCchhHHHHHHHHHHH
Confidence            99999999888888999999999999999999999999999999988789999999999999999999999999999999


Q ss_pred             HHHHHHHHccC-CceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCC
Q 024994          161 TKNLACEWAKD-NIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLP  229 (259)
Q Consensus       161 ~~~~a~e~~~~-gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  229 (259)
                      +++++.|+.+. ||+|+.|+||+++|++.........        ....+.....+|+++++.+++++..
T Consensus       167 ~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~~~--------~~~~~~~~~~~pe~vA~~il~~~~~  228 (330)
T PRK06139        167 SEALRGELADHPDIHVCDVYPAFMDTPGFRHGANYTG--------RRLTPPPPVYDPRRVAKAVVRLADR  228 (330)
T ss_pred             HHHHHHHhCCCCCeEEEEEecCCccCccccccccccc--------ccccCCCCCCCHHHHHHHHHHHHhC
Confidence            99999999875 8999999999999998753211100        0112233466899999999988854

>PRK05599 hypothetical protein; Provisional

Probab=100.00  E-value=5.2e-39  Score=265.27  Aligned_cols=226  Identities=16%  Similarity=0.241  Sum_probs=194.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF-KVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||++|||+++|++|+ +|++|++++|+.+++++..+++.+.+. .+.++++|++|.++++++++++.+.+ +++
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~i   78 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELA-GEI   78 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhc-CCC
Confidence            789999999999999999999 599999999999999888888876543 57889999999999999999999988 799


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      |++|||||.....+..+.+.+++++++++|+.+++.+++.++|.|.+++ .++||++||..+..+.+++..|++||+|++
T Consensus        79 d~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~  158 (246)
T PRK05599         79 SLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVYGSTKAGLD  158 (246)
T ss_pred             CEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcchhhHHHHHH
Confidence            9999999986555555667788899999999999999999999998654 689999999999999999999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI  238 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~  238 (259)
                      +|+++++.|+.++||+||+++||+++|++.....+.                ....+|+|+++.++++++....   ++.
T Consensus       159 ~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~~~----------------~~~~~pe~~a~~~~~~~~~~~~---~~~  219 (246)
T PRK05599        159 AFCQGLADSLHGSHVRLIIARPGFVIGSMTTGMKPA----------------PMSVYPRDVAAAVVSAITSSKR---STT  219 (246)
T ss_pred             HHHHHHHHHhcCCCceEEEecCCcccchhhcCCCCC----------------CCCCCHHHHHHHHHHHHhcCCC---Cce
Confidence            999999999999999999999999999986432211                1135799999999999976432   456


Q ss_pred             EEeCCCcee
Q 024994          239 ICVDGGVTV  247 (259)
Q Consensus       239 l~~dgG~~~  247 (259)
                      +.++++..+
T Consensus       220 ~~~~~~~~~  228 (246)
T PRK05599        220 LWIPGRLRV  228 (246)
T ss_pred             EEeCccHHH
Confidence            777776533

>PRK06198 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.8e-39  Score=265.49  Aligned_cols=245  Identities=31%  Similarity=0.414  Sum_probs=213.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCE-EEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAI-VHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |+++|||++++||++++++|+++|++ |++++|+.++.+....++...+.++.++.+|+++.+++.++++.+.+.+ +++
T Consensus         7 k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~i   85 (260)
T PRK06198          7 KVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAF-GRL   85 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh-CCC
Confidence            68999999999999999999999998 9999999887777766776556678889999999999999999999888 689


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      |++|||+|.....++.+.+.+++++++++|+.+++.+++++++.|.+++ .+++|++||..+..+.+....|+++|++++
T Consensus        86 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~  165 (260)
T PRK06198         86 DALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCASKGALA  165 (260)
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCCcchhHHHHHHHH
Confidence            9999999988777778889999999999999999999999999997653 589999999998888888999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCC--CCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccc
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEG--PEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG  236 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G  236 (259)
                      +++++++.++.+.+|+++.++||+++|++.......  .....+........|.++..+++|+++++.+++++.+.+++|
T Consensus       166 ~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G  245 (260)
T PRK06198        166 TLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDEVARAVAFLLSDESGLMTG  245 (260)
T ss_pred             HHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCCccCCcCHHHHHHHHHHHcChhhCCccC
Confidence            999999999999999999999999999975321110  011123444445667888999999999999999988889999


Q ss_pred             cEEEeCCCce
Q 024994          237 QIICVDGGVT  246 (259)
Q Consensus       237 ~~l~~dgG~~  246 (259)
                      ++|.+|+|..
T Consensus       246 ~~~~~~~~~~  255 (260)
T PRK06198        246 SVIDFDQSVW  255 (260)
T ss_pred             ceEeECCccc
Confidence            9999999975

>PRK08862 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.5e-39  Score=261.82  Aligned_cols=218  Identities=18%  Similarity=0.224  Sum_probs=188.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++...+.++..+++|++|.++++++++++.+++++++|
T Consensus         6 k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~iD   85 (227)
T PRK08862          6 SIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRAPD   85 (227)
T ss_pred             eEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCCCC
Confidence            68999999999999999999999999999999999998888887766667888999999999999999999999932899


Q ss_pred             EEEEcCCCC-CCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           81 ILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        81 ~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      ++|||||.. ...++.+.+.++|.+.+++|+.+++.+++.++|+|.+++ .|+||++||..+   .+++..|+++|++++
T Consensus        86 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~---~~~~~~Y~asKaal~  162 (227)
T PRK08862         86 VLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDD---HQDLTGVESSNALVS  162 (227)
T ss_pred             EEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCC---CCCcchhHHHHHHHH
Confidence            999999864 345788889999999999999999999999999998654 689999999754   356788999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI  238 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~  238 (259)
                      +|+++++.|+.++|||||+|+||+++|+...      . +..++..           .+|++.+..||++  +.|+||+.
T Consensus       163 ~~~~~la~el~~~~Irvn~v~PG~i~t~~~~------~-~~~~~~~-----------~~~~~~~~~~l~~--~~~~tg~~  222 (227)
T PRK08862        163 GFTHSWAKELTPFNIRVGGVVPSIFSANGEL------D-AVHWAEI-----------QDELIRNTEYIVA--NEYFSGRV  222 (227)
T ss_pred             HHHHHHHHHHhhcCcEEEEEecCcCcCCCcc------C-HHHHHHH-----------HHHHHhheeEEEe--cccccceE
Confidence            9999999999999999999999999999321      1 1112221           1899999999996  67999988


Q ss_pred             EEe
Q 024994          239 ICV  241 (259)
Q Consensus       239 l~~  241 (259)
                      +.-
T Consensus       223 ~~~  225 (227)
T PRK08862        223 VEA  225 (227)
T ss_pred             Eee
Confidence            753

>PRK12746 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-38  Score=263.84  Aligned_cols=241  Identities=33%  Similarity=0.459  Sum_probs=209.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEe-eCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC---
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTC-SRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ---   76 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~---   76 (259)
                      |+++||||+|+||.+++++|+++|++|+++ .|+.++.++..+++...+.++.++++|++|.+++.++++++.+.++   
T Consensus         7 ~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~~~   86 (254)
T PRK12746          7 KVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQIRV   86 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcccc
Confidence            689999999999999999999999998775 7888777777766655556788999999999999999999988762   


Q ss_pred             --CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhH
Q 024994           77 --GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYK  154 (259)
Q Consensus        77 --~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  154 (259)
                        +++|++|||||....+++.+.+.+.|++++++|+.+++.+++.++|.|.+.  +++|++||..+..+.+++..|++||
T Consensus        87 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~v~~sS~~~~~~~~~~~~Y~~sK  164 (254)
T PRK12746         87 GTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAE--GRVINISSAEVRLGFTGSIAYGLSK  164 (254)
T ss_pred             CCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcC--CEEEEECCHHhcCCCCCCcchHhhH
Confidence              369999999998777778888999999999999999999999999998653  7999999999988889999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 024994          155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYI  234 (259)
Q Consensus       155 ~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~  234 (259)
                      +++++++++++.++.+.+++++.++||+++|++.......+.   .........+.++..+++|+++++.+++++.+.++
T Consensus       165 ~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  241 (254)
T PRK12746        165 GALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPE---IRNFATNSSVFGRIGQVEDIADAVAFLASSDSRWV  241 (254)
T ss_pred             HHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChh---HHHHHHhcCCcCCCCCHHHHHHHHHHHcCcccCCc
Confidence            999999999999999999999999999999998765433222   33333455667888899999999999998877889


Q ss_pred             cccEEEeCCCce
Q 024994          235 TGQIICVDGGVT  246 (259)
Q Consensus       235 ~G~~l~~dgG~~  246 (259)
                      +|+.++++||..
T Consensus       242 ~g~~~~i~~~~~  253 (254)
T PRK12746        242 TGQIIDVSGGFC  253 (254)
T ss_pred             CCCEEEeCCCcc
Confidence            999999999964

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4.6e-38  Score=260.10  Aligned_cols=238  Identities=32%  Similarity=0.471  Sum_probs=207.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++||||+++|||.+++++|+++|++|++++|+.++++...+++...+.++.++++|+++.++++++++.+.+.+ +++|
T Consensus         6 ~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id   84 (253)
T PRK08217          6 KVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDF-GQLN   84 (253)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc-CCCC
Confidence            589999999999999999999999999999999988888877777666788999999999999999999998887 6899


Q ss_pred             EEEEcCCCCCCCC--------C-CCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC-CCCEEEEecCCCccCCCCCChhh
Q 024994           81 ILINNAAIAFVKP--------T-VDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVGGVRGIPSVSLY  150 (259)
Q Consensus        81 ~vi~~ag~~~~~~--------~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~isS~~~~~~~~~~~~Y  150 (259)
                      +||||||......        + .+.+.++++.++++|+.+++.+.+.++|.|.+. ..+.++++||.. ..+.++...|
T Consensus        85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~-~~~~~~~~~Y  163 (253)
T PRK08217         85 GLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIA-RAGNMGQTNY  163 (253)
T ss_pred             EEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccc-ccCCCCCchh
Confidence            9999999764332        2 567889999999999999999999999999765 457899998864 4677889999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 024994          151 GAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPA  230 (259)
Q Consensus       151 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  230 (259)
                      +++|+++++++++++.++.++||++++++||+++|++.....     +...+.+....|.++..+++|+++.+.++++  
T Consensus       164 ~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~--  236 (253)
T PRK08217        164 SASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMK-----PEALERLEKMIPVGRLGEPEEIAHTVRFIIE--  236 (253)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccC-----HHHHHHHHhcCCcCCCcCHHHHHHHHHHHHc--
Confidence            999999999999999999889999999999999999875432     2245556667788899999999999999995  


Q ss_pred             CCCccccEEEeCCCcee
Q 024994          231 ASYITGQIICVDGGVTV  247 (259)
Q Consensus       231 ~~~~~G~~l~~dgG~~~  247 (259)
                      ..+++|+++++|||.++
T Consensus       237 ~~~~~g~~~~~~gg~~~  253 (253)
T PRK08217        237 NDYVTGRVLEIDGGLRL  253 (253)
T ss_pred             CCCcCCcEEEeCCCccC
Confidence            46889999999999753

>PRK09134 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8e-38  Score=259.90  Aligned_cols=240  Identities=27%  Similarity=0.318  Sum_probs=205.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeC-ChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSR-NQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||++|||++++++|+++|++|+++.+ +.+..+...+++...+.++.++.+|++|.+++.++++++.+.+ +++
T Consensus        10 k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~-~~i   88 (258)
T PRK09134         10 RAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAAL-GPI   88 (258)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-CCC
Confidence            68999999999999999999999999988766 4556666666666556678999999999999999999998888 689


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      |+||||||.....++.+.+.++|++++++|+.+++.+++++.++|.+...+++|+++|..+..+.|.+..|++||+++++
T Consensus        89 D~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~~~~Y~~sK~a~~~  168 (258)
T PRK09134         89 TLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPDFLSYTLSKAALWT  168 (258)
T ss_pred             CEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCCchHHHHHHHHHHH
Confidence            99999999887777888899999999999999999999999999987767899999998777777888899999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      ++++++.++.+. |+++.++||++.|+....      .. .........+.++..+++|++++++++++  ..+++|+.+
T Consensus       169 ~~~~la~~~~~~-i~v~~i~PG~v~t~~~~~------~~-~~~~~~~~~~~~~~~~~~d~a~~~~~~~~--~~~~~g~~~  238 (258)
T PRK09134        169 ATRTLAQALAPR-IRVNAIGPGPTLPSGRQS------PE-DFARQHAATPLGRGSTPEEIAAAVRYLLD--APSVTGQMI  238 (258)
T ss_pred             HHHHHHHHhcCC-cEEEEeecccccCCcccC------hH-HHHHHHhcCCCCCCcCHHHHHHHHHHHhc--CCCcCCCEE
Confidence            999999999775 999999999998864211      11 22333445677888999999999999996  467899999


Q ss_pred             EeCCCceeeecc
Q 024994          240 CVDGGVTVTVNV  251 (259)
Q Consensus       240 ~~dgG~~~~~~~  251 (259)
                      .+|||..+++..
T Consensus       239 ~i~gg~~~~~~~  250 (258)
T PRK09134        239 AVDGGQHLAWLT  250 (258)
T ss_pred             EECCCeeccccc
Confidence            999998776654

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=100.00  E-value=4.5e-38  Score=259.85  Aligned_cols=242  Identities=35%  Similarity=0.492  Sum_probs=215.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+|+||.+++++|+++|++|++++|+.++.....+++.+.+.++.++.+|++|.++++++++++.+.+ +++|
T Consensus         7 ~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~~d   85 (251)
T PRK12826          7 RVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDF-GRLD   85 (251)
T ss_pred             CEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh-CCCC
Confidence            689999999999999999999999999999999888887777776666678999999999999999999999988 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCcc-CCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV-RGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~-~~~~~~~~Y~~sK~a~~~  159 (259)
                      +|||++|.....++.+.+.+++++.++.|+.+++.+++.++|.|.+.+.+++|++||..+. .+.+....|+.+|+++++
T Consensus        86 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~~y~~sK~a~~~  165 (251)
T PRK12826         86 ILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASKAGLVG  165 (251)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCCCccHHHHHHHHHHH
Confidence            9999999887777778899999999999999999999999999988778899999999888 788889999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      ++++++.++.+.|++++.++||+++|+........    .....+....|.+++.+++|+++++.++++....+++|+++
T Consensus       166 ~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~  241 (251)
T PRK12826        166 FTRALALELAARNITVNSVHPGGVDTPMAGNLGDA----QWAEAIAAAIPLGRLGEPEDIAAAVLFLASDEARYITGQTL  241 (251)
T ss_pred             HHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCch----HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcCCcEE
Confidence            99999999988899999999999999986543221    12334455678888999999999999999877788999999


Q ss_pred             EeCCCcee
Q 024994          240 CVDGGVTV  247 (259)
Q Consensus       240 ~~dgG~~~  247 (259)
                      .+|||..+
T Consensus       242 ~~~~g~~~  249 (251)
T PRK12826        242 PVDGGATL  249 (251)
T ss_pred             EECCCccC
Confidence            99999865

>PRK12827 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.2e-38  Score=258.34  Aligned_cols=237  Identities=38%  Similarity=0.508  Sum_probs=207.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeC----ChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSR----NQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ   76 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (259)
                      |++|||||+|+||++++++|+++|++|++++|    +.+..+....++...+.++.++.+|++|.++++++++++.+.+ 
T Consensus         7 ~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-   85 (249)
T PRK12827          7 RRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEEF-   85 (249)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh-
Confidence            68999999999999999999999999999665    4455555555665556688999999999999999999998887 


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHH-HHhHhCCCCEEEEecCCCccCCCCCChhhhhhHH
Q 024994           77 GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH-PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKG  155 (259)
Q Consensus        77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~-~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~  155 (259)
                      +++|+||||+|.....++.+.+.++|++++++|+.+++.+++++. +.+.+.+.+++|++||..+..+.+++..|+.+|+
T Consensus        86 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sK~  165 (249)
T PRK12827         86 GRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYAASKA  165 (249)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCCCchhHHHHH
Confidence            689999999999877788888999999999999999999999999 6666666789999999999989899999999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcc
Q 024994          156 AMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT  235 (259)
Q Consensus       156 a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~  235 (259)
                      ++++++++++.++.+.+++++.++||+++|++.....       .........|..+..+++|+++.+.+++++...+++
T Consensus       166 a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~-------~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~  238 (249)
T PRK12827        166 GLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAA-------PTEHLLNPVPVQRLGEPDEVAALVAFLVSDAASYVT  238 (249)
T ss_pred             HHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccc-------hHHHHHhhCCCcCCcCHHHHHHHHHHHcCcccCCcc
Confidence            9999999999999888999999999999999765432       113444556777788999999999999988888999


Q ss_pred             ccEEEeCCCc
Q 024994          236 GQIICVDGGV  245 (259)
Q Consensus       236 G~~l~~dgG~  245 (259)
                      |+.+.+|||+
T Consensus       239 g~~~~~~~g~  248 (249)
T PRK12827        239 GQVIPVDGGF  248 (249)
T ss_pred             CcEEEeCCCC
Confidence            9999999985

>PRK05876 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-38  Score=265.32  Aligned_cols=227  Identities=26%  Similarity=0.368  Sum_probs=193.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++++|++|.++++++++++.+.+ +++|
T Consensus         7 k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~id   85 (275)
T PRK05876          7 RGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLL-GHVD   85 (275)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHc-CCCC
Confidence            689999999999999999999999999999999998888877777666678899999999999999999999988 7899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      +||||||....+++.+.+.++|++++++|+.+++.++++++|.|.+++ .++||++||..+..+.++...|++||+++++
T Consensus        86 ~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~  165 (275)
T PRK05876         86 VVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVG  165 (275)
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCCchHHHHHHHHHH
Confidence            999999998778888999999999999999999999999999997765 6899999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHH----HhhhhcCCCCCCCCHHHHHHHHHHHhC
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFL----DGIARQTPIGRAGEPDEVSSLVAFLCL  228 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~va~~~~~l~~  228 (259)
                      |+++++.|+.++||++++|+||+++|++..............    .............+|+|+++.++.-+.
T Consensus       166 ~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ai~  238 (275)
T PRK05876        166 LAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAIL  238 (275)
T ss_pred             HHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccCCCHHHHHHHHHHHHH
Confidence            999999999999999999999999999865421110000000    000011112346789999999887664

>PRK07074 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-37  Score=259.08  Aligned_cols=241  Identities=27%  Similarity=0.362  Sum_probs=209.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+++||++++++|+++|++|++++|+.++.+.+..++.  +.++.++++|++|.+++.++++++.+++ +++|
T Consensus         3 k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~d   79 (257)
T PRK07074          3 RTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG--DARFVPVACDLTDAASLAAALANAAAER-GPVD   79 (257)
T ss_pred             CEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence            689999999999999999999999999999999988877666552  3468899999999999999999999988 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      ++||++|.....++.+.+.++|++.+++|+.+++.+++++.+.+.+++.+++|++||..+..+ .+...|+.+|++++++
T Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-~~~~~y~~sK~a~~~~  158 (257)
T PRK07074         80 VLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAA-LGHPAYSAAKAGLIHY  158 (257)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCC-CCCcccHHHHHHHHHH
Confidence            999999987766777889999999999999999999999999998877799999999766533 4567899999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC  240 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~  240 (259)
                      +++++.++.+.||+++.++||+++|++.......  ............|..++..++|+++++.+++++...+++|+.+.
T Consensus       159 ~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~  236 (257)
T PRK07074        159 TKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAA--NPQVFEELKKWYPLQDFATPDDVANAVLFLASPAARAITGVCLP  236 (257)
T ss_pred             HHHHHHHHhHhCeEEEEEEeCcCCcchhhccccc--ChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCchhcCcCCcEEE
Confidence            9999999999999999999999999986432211  12234444456678889999999999999999878899999999


Q ss_pred             eCCCcee
Q 024994          241 VDGGVTV  247 (259)
Q Consensus       241 ~dgG~~~  247 (259)
                      +|+|+..
T Consensus       237 ~~~g~~~  243 (257)
T PRK07074        237 VDGGLTA  243 (257)
T ss_pred             eCCCcCc
Confidence            9999655

>PRK07060 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.3e-38  Score=258.72  Aligned_cols=234  Identities=32%  Similarity=0.399  Sum_probs=202.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+++|||++++||.++++.|+++|++|++++|+.++.++...+.     +..++.+|+++.++++++++.    . +++|
T Consensus        10 ~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~----~-~~~d   79 (245)
T PRK07060         10 KSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET-----GCEPLRLDVGDDAAIRAALAA----A-GAFD   79 (245)
T ss_pred             CEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCeEEEecCCCHHHHHHHHHH----h-CCCC
Confidence            68999999999999999999999999999999988776554432     356788999999988887765    3 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      ++|||||.....+..+.+.+++++++++|+.+++.+++++.+.+.+++ .++||++||..+..+.+.+..|+.+|++++.
T Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sK~a~~~  159 (245)
T PRK07060         80 GLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAALDA  159 (245)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCCcHhHHHHHHHHH
Confidence            999999987777777789999999999999999999999999987654 4899999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      ++++++.++.+.||+++.++||+++|++.......+   .....+....|.+++.+++|+++++.+++++...+++|+.+
T Consensus       160 ~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~G~~~  236 (245)
T PRK07060        160 ITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDP---QKSGPMLAAIPLGRFAEVDDVAAPILFLLSDAASMVSGVSL  236 (245)
T ss_pred             HHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCH---HHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCCccCcEE
Confidence            999999999888999999999999999865332221   13344555678889999999999999999988889999999


Q ss_pred             EeCCCcee
Q 024994          240 CVDGGVTV  247 (259)
Q Consensus       240 ~~dgG~~~  247 (259)
                      .+|||..+
T Consensus       237 ~~~~g~~~  244 (245)
T PRK07060        237 PVDGGYTA  244 (245)
T ss_pred             eECCCccC
Confidence            99999754

>PRK08703 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.3e-38  Score=257.25  Aligned_cols=228  Identities=24%  Similarity=0.289  Sum_probs=197.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhc-CCcEEEEEecCCC--HHHHHHHHHHHHHHcCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSS--REQREKLIETVTSIFQG   77 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~   77 (259)
                      |+++||||++|||++++++|+++|++|++++|+.+.++...+++... +..+.++++|+++  .++++++++++.+.+++
T Consensus         7 k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~~~   86 (239)
T PRK08703          7 KTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEATQG   86 (239)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHhCC
Confidence            68999999999999999999999999999999999888877777543 3357788999986  57889999999888745


Q ss_pred             CccEEEEcCCCCC-CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHH
Q 024994           78 KLNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGA  156 (259)
Q Consensus        78 ~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  156 (259)
                      ++|++|||||... ..++.+.+.++|++++++|+.+++.++++++|.|.+.+.+++++++|..+..+.+.+..|++||++
T Consensus        87 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKaa  166 (239)
T PRK08703         87 KLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGFGASKAA  166 (239)
T ss_pred             CCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCCCccchHHhHHH
Confidence            7999999999753 357788899999999999999999999999999987777999999999999998889999999999


Q ss_pred             HHHHHHHHHHHHccC-CceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcc
Q 024994          157 MNQLTKNLACEWAKD-NIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT  235 (259)
Q Consensus       157 ~~~~~~~~a~e~~~~-gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~  235 (259)
                      +++|+++++.|+.++ +|+|+.|+||+++|++.....+...             ..+...++|++..+.|++++.++++|
T Consensus       167 ~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (239)
T PRK08703        167 LNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHPGEA-------------KSERKSYGDVLPAFVWWASAESKGRS  233 (239)
T ss_pred             HHHHHHHHHHHhccCCCeEEEEEecCcccCccccccCCCCC-------------ccccCCHHHHHHHHHHHhCccccCcC
Confidence            999999999999876 6999999999999998654322111             11245899999999999999999999


Q ss_pred             ccEEEe
Q 024994          236 GQIICV  241 (259)
Q Consensus       236 G~~l~~  241 (259)
                      |+++.+
T Consensus       234 g~~~~~  239 (239)
T PRK08703        234 GEIVYL  239 (239)
T ss_pred             CeEeeC
Confidence            999864

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.4e-37  Score=256.39  Aligned_cols=240  Identities=42%  Similarity=0.576  Sum_probs=213.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEe-eCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTC-SRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||+++||.+++++|+++|++|+++ +|+.++.+...+.+...+.++.++.+|++|.++++++++++.+.+ +++
T Consensus         6 ~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i   84 (247)
T PRK05565          6 KVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKF-GKI   84 (247)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh-CCC
Confidence            689999999999999999999999999999 999888877777776656678999999999999999999999888 689


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      |+|||++|.....+..+.+.+++++++++|+.+++.+++.+.|.+.+.+.+++|++||..+..+.+....|+.+|++++.
T Consensus        85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK~a~~~  164 (247)
T PRK05565         85 DILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASKGAVNA  164 (247)
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCCccHHHHHHHHHHH
Confidence            99999999886667778899999999999999999999999999988778999999999998898899999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      ++++++.++.+.|++++.++||+++|++.+.....     .........+..+..+++++++.+.++++..+..++|+.+
T Consensus       165 ~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~  239 (247)
T PRK05565        165 FTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEE-----DKEGLAEEIPLGRLGKPEEIAKVVLFLASDDASYITGQII  239 (247)
T ss_pred             HHHHHHHHHHHcCeEEEEEEECCccCccccccChH-----HHHHHHhcCCCCCCCCHHHHHHHHHHHcCCccCCccCcEE
Confidence            99999999988999999999999999987654321     2222333456677889999999999999988899999999


Q ss_pred             EeCCCce
Q 024994          240 CVDGGVT  246 (259)
Q Consensus       240 ~~dgG~~  246 (259)
                      .+|+|+.
T Consensus       240 ~~~~~~~  246 (247)
T PRK05565        240 TVDGGWT  246 (247)
T ss_pred             EecCCcc
Confidence            9999964

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=1.8e-37  Score=255.57  Aligned_cols=241  Identities=37%  Similarity=0.494  Sum_probs=212.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChh-HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI-ELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++||||++|+||.+++++|+++|++|+++.|+.. ..+....++...+.++.++.+|+++.+++.++++++.+.+ +++
T Consensus         6 ~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~i   84 (248)
T PRK05557          6 KVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEF-GGV   84 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc-CCC
Confidence            68999999999999999999999999988887655 3555555565556688999999999999999999999888 689


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      |+|||++|.....+..+.+.+++++++++|+.+++.+.+.+.+.+.+.+.++++++||..+..+.++...|+++|++++.
T Consensus        85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~~~~y~~sk~a~~~  164 (248)
T PRK05557         85 DILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASKAGVIG  164 (248)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCCCchhHHHHHHHHH
Confidence            99999999887777778899999999999999999999999999988777899999999888888899999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      +++.++.++.+.+++++.++||+++|++.....     ......+....+.+++.+++|+++++.+++.+.+.+++|+.+
T Consensus       165 ~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~  239 (248)
T PRK05557        165 FTKSLARELASRGITVNAVAPGFIETDMTDALP-----EDVKEAILAQIPLGRLGQPEEIASAVAFLASDEAAYITGQTL  239 (248)
T ss_pred             HHHHHHHHhhhhCeEEEEEecCccCCccccccC-----hHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccCCccccEE
Confidence            999999999889999999999999998865431     113445556677888899999999999999887789999999


Q ss_pred             EeCCCcee
Q 024994          240 CVDGGVTV  247 (259)
Q Consensus       240 ~~dgG~~~  247 (259)
                      ++|||.+|
T Consensus       240 ~i~~~~~~  247 (248)
T PRK05557        240 HVNGGMVM  247 (248)
T ss_pred             EecCCccC
Confidence            99999876

>PLN00015 protochlorophyllide reductase

Probab=100.00  E-value=2.1e-38  Score=269.84  Aligned_cols=238  Identities=18%  Similarity=0.175  Sum_probs=197.2

Q ss_pred             EEEcCcchHHHHHHHHHHHCC-CEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCccEE
Q 024994            4 LVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNIL   82 (259)
Q Consensus         4 lItG~s~giG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~v   82 (259)
                      |||||++|||++++++|+++| ++|++++|+.++.++...++...+.++.++++|++|.++++++++++.+.+ +++|+|
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~-~~iD~l   79 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSG-RPLDVL   79 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcC-CCCCEE
Confidence            699999999999999999999 999999999988877777765445578889999999999999999998877 689999


Q ss_pred             EEcCCCCCC-CCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC--CCEEEEecCCCccCC----------------
Q 024994           83 INNAAIAFV-KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG--NGSIVFISSVGGVRG----------------  143 (259)
Q Consensus        83 i~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~ii~isS~~~~~~----------------  143 (259)
                      |||||+... .+..+.+.++|+++|++|+.+++.+++.++|.|.+.+  .++||++||..+..+                
T Consensus        80 InnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~  159 (308)
T PLN00015         80 VCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLR  159 (308)
T ss_pred             EECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhh
Confidence            999998643 3566788999999999999999999999999998775  589999999876421                


Q ss_pred             -------------------CCCChhhhhhHHHHHHHHHHHHHHHcc-CCceEEEEeCCce-eCCCCCCCcCCCCchHHHH
Q 024994          144 -------------------IPSVSLYGAYKGAMNQLTKNLACEWAK-DNIRTNTVAPWVI-KTSMIKPFEEGPEGSEFLD  202 (259)
Q Consensus       144 -------------------~~~~~~Y~~sK~a~~~~~~~~a~e~~~-~gi~v~~v~pg~v-~t~~~~~~~~~~~~~~~~~  202 (259)
                                         .+++.+|++||+|...+++.+++++.+ .||+|++++||+| .|++.......   .....
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~---~~~~~  236 (308)
T PLN00015        160 GLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPL---FRLLF  236 (308)
T ss_pred             hhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHH---HHHHH
Confidence                               124577999999999999999999965 6999999999999 78887543211   00111


Q ss_pred             hhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCc
Q 024994          203 GIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVDGGV  245 (259)
Q Consensus       203 ~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~  245 (259)
                      ......+.++..+|++.++.+++++++...+.+|+++..||+.
T Consensus       237 ~~~~~~~~~~~~~pe~~a~~~~~l~~~~~~~~~G~~~~~~g~~  279 (308)
T PLN00015        237 PPFQKYITKGYVSEEEAGKRLAQVVSDPSLTKSGVYWSWNGGS  279 (308)
T ss_pred             HHHHHHHhcccccHHHhhhhhhhhccccccCCCccccccCCcc
Confidence            1122345567789999999999999988888999999999864

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=100.00  E-value=1.4e-37  Score=256.47  Aligned_cols=240  Identities=33%  Similarity=0.384  Sum_probs=206.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEE-eeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHT-CSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||+|+||.+++++|+++|++|++ ..|+.++.++...++...+.++.++++|++|.++++++++++.+.+ +++
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~-~~i   80 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHD-EPL   80 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhC-CCC
Confidence            68999999999999999999999999977 4677777777777776656678899999999999999999998888 789


Q ss_pred             cEEEEcCCCC-CCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC---CCCEEEEecCCCccCCCCC-ChhhhhhH
Q 024994           80 NILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS---GNGSIVFISSVGGVRGIPS-VSLYGAYK  154 (259)
Q Consensus        80 d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~~~ii~isS~~~~~~~~~-~~~Y~~sK  154 (259)
                      |+||||+|.. ...+..+.+.++|+.++++|+.+++.+++.+++.|.+.   ..++||++||..+..+.+. +..|+++|
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~~~~Y~~sK  160 (247)
T PRK09730         81 AALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASK  160 (247)
T ss_pred             CEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCcccchHhHH
Confidence            9999999975 34567788999999999999999999999999998765   2578999999988888775 46899999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 024994          155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYI  234 (259)
Q Consensus       155 ~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~  234 (259)
                      ++++.++++++.++.+.||+++.++||+++|++.....    ............|.++..+++|+++.+.+++++...++
T Consensus       161 ~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~  236 (247)
T PRK09730        161 GAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGG----EPGRVDRVKSNIPMQRGGQPEEVAQAIVWLLSDKASYV  236 (247)
T ss_pred             HHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCC----CHHHHHHHHhcCCCCCCcCHHHHHHHHHhhcChhhcCc
Confidence            99999999999999999999999999999999754321    11233445556678888899999999999999878899


Q ss_pred             cccEEEeCCCc
Q 024994          235 TGQIICVDGGV  245 (259)
Q Consensus       235 ~G~~l~~dgG~  245 (259)
                      +|+++.+|||.
T Consensus       237 ~g~~~~~~g~~  247 (247)
T PRK09730        237 TGSFIDLAGGK  247 (247)
T ss_pred             cCcEEecCCCC
Confidence            99999999974

>PRK07577 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.8e-38  Score=255.51  Aligned_cols=230  Identities=32%  Similarity=0.410  Sum_probs=200.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+++||++++++|+++|++|++++|+.+..      .     ...++++|++|.++++++++++.+.+  ++|
T Consensus         4 k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~-----~~~~~~~D~~~~~~~~~~~~~~~~~~--~~d   70 (234)
T PRK07577          4 RTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD------F-----PGELFACDLADIEQTAATLAQINEIH--PVD   70 (234)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc------c-----CceEEEeeCCCHHHHHHHHHHHHHhC--CCc
Confidence            6899999999999999999999999999999987541      0     12467899999999999999988865  589


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      ++|||+|.....++.+.+.+++++.+++|+.+++.+.+.++|.|++.+.++||++||.. ..+.+....|+++|++++++
T Consensus        71 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~-~~~~~~~~~Y~~sK~a~~~~  149 (234)
T PRK07577         71 AIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRA-IFGALDRTSYSAAKSALVGC  149 (234)
T ss_pred             EEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcccc-ccCCCCchHHHHHHHHHHHH
Confidence            99999999877788888999999999999999999999999999887789999999985 45677889999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC  240 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~  240 (259)
                      +++++.++.+.||++++|+||+++|++........  ...........+.++..+|+|+++.+.+++++...+++|+.+.
T Consensus       150 ~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~  227 (234)
T PRK07577        150 TRTWALELAEYGITVNAVAPGPIETELFRQTRPVG--SEEEKRVLASIPMRRLGTPEEVAAAIAFLLSDDAGFITGQVLG  227 (234)
T ss_pred             HHHHHHHHHhhCcEEEEEecCcccCcccccccccc--hhHHHHHhhcCCCCCCcCHHHHHHHHHHHhCcccCCccceEEE
Confidence            99999999999999999999999999875432211  1133344556788888899999999999999888899999999


Q ss_pred             eCCCce
Q 024994          241 VDGGVT  246 (259)
Q Consensus       241 ~dgG~~  246 (259)
                      +|||.+
T Consensus       228 ~~g~~~  233 (234)
T PRK07577        228 VDGGGS  233 (234)
T ss_pred             ecCCcc
Confidence            999865

>PRK07109 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-37  Score=268.19  Aligned_cols=221  Identities=24%  Similarity=0.350  Sum_probs=196.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++...+.++.++++|++|.++++++++++.+++ +++|
T Consensus         9 k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~-g~iD   87 (334)
T PRK07109          9 QVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEEL-GPID   87 (334)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHC-CCCC
Confidence            689999999999999999999999999999999999988888887777789999999999999999999999999 7899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      ++|||||.....++.+.+.+++++++++|+.+++.+++.++|+|.+++.++||++||..+..+.+....|++||+++++|
T Consensus        88 ~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asK~a~~~~  167 (334)
T PRK07109         88 TWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAKHAIRGF  167 (334)
T ss_pred             EEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCcchHHHHHHHHHHHH
Confidence            99999998777788889999999999999999999999999999987789999999999999999999999999999999


Q ss_pred             HHHHHHHHcc--CCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 024994          161 TKNLACEWAK--DNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPA  230 (259)
Q Consensus       161 ~~~~a~e~~~--~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  230 (259)
                      +++++.|+.+  .+|+++.|+||.++|++.......      ..  ....+..+..+|+|++++++++++..
T Consensus       168 ~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~~------~~--~~~~~~~~~~~pe~vA~~i~~~~~~~  231 (334)
T PRK07109        168 TDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARSR------LP--VEPQPVPPIYQPEVVADAILYAAEHP  231 (334)
T ss_pred             HHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhhh------cc--ccccCCCCCCCHHHHHHHHHHHHhCC
Confidence            9999999875  469999999999999976432110      00  11234556789999999999999754

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=100.00  E-value=1.8e-37  Score=287.58  Aligned_cols=246  Identities=29%  Similarity=0.340  Sum_probs=211.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+.++...+++...  ...+.++++|++|.++++++++++.+.+ ++
T Consensus       415 kvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~-g~  493 (676)
T TIGR02632       415 RVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAY-GG  493 (676)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhc-CC
Confidence            68999999999999999999999999999999998887776666532  2367889999999999999999999999 78


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccCCCCCChhhhhhHHHH
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAM  157 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~~~~~~~~Y~~sK~a~  157 (259)
                      +|+||||||.....++.+.+.++|+.++++|+.+++.+++.+++.|.+++ .++||++||..+..+.++..+|++||+++
T Consensus       494 iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~~~aY~aSKaA~  573 (676)
T TIGR02632       494 VDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYSAAKAAE  573 (676)
T ss_pred             CcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCCCHHHHHHHHHH
Confidence            99999999987767788889999999999999999999999999998764 57999999999999999999999999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEeCCceeCC--CCCCCcC-------CCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhC
Q 024994          158 NQLTKNLACEWAKDNIRTNTVAPWVIKTS--MIKPFEE-------GPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCL  228 (259)
Q Consensus       158 ~~~~~~~a~e~~~~gi~v~~v~pg~v~t~--~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  228 (259)
                      ++++++++.++.+.|||||+|+||.+.++  +......       ........+.+....++++..+|+|+++++.|+++
T Consensus       574 ~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~peDVA~av~~L~s  653 (676)
T TIGR02632       574 AHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIFPADIAEAVFFLAS  653 (676)
T ss_pred             HHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCcCCCcCHHHHHHHHHHHhC
Confidence            99999999999999999999999998653  3221100       00111223445667889999999999999999999


Q ss_pred             CCCCCccccEEEeCCCcee
Q 024994          229 PAASYITGQIICVDGGVTV  247 (259)
Q Consensus       229 ~~~~~~~G~~l~~dgG~~~  247 (259)
                      +...++||+++++|||..-
T Consensus       654 ~~~~~~TG~~i~vDGG~~~  672 (676)
T TIGR02632       654 SKSEKTTGCIITVDGGVPA  672 (676)
T ss_pred             CcccCCcCcEEEECCCchh
Confidence            8888999999999999653

>PRK06182 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.1e-37  Score=261.12  Aligned_cols=222  Identities=24%  Similarity=0.278  Sum_probs=191.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+||||++++++|+++|++|++++|+.+++++...      .++.++++|++|.++++++++++.+.+ +++|
T Consensus         4 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~------~~~~~~~~Dv~~~~~~~~~~~~~~~~~-~~id   76 (273)
T PRK06182          4 KVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS------LGVHPLSLDVTDEASIKAAVDTIIAEE-GRID   76 (273)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh------CCCeEEEeeCCCHHHHHHHHHHHHHhc-CCCC
Confidence            689999999999999999999999999999999887655431      247788999999999999999999988 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||....+++.+.+.+++++++++|+.+++.+++.++|.|++.+.++||++||..+..+.+....|+++|+++++|
T Consensus        77 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~  156 (273)
T PRK06182         77 VLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFALEGF  156 (273)
T ss_pred             EEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCCccHhHHHHHHHHHH
Confidence            99999999887888899999999999999999999999999999888789999999998888888888999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcC-------CCCch----HHHHhhhhcCCCCCCCCHHHHHHHHHHHhCC
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE-------GPEGS----EFLDGIARQTPIGRAGEPDEVSSLVAFLCLP  229 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~-------~~~~~----~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  229 (259)
                      +++++.|+.+.||+++.++||+++|++......       .....    .....+....+.++..+|+++|++++++++.
T Consensus       157 ~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~~~~  236 (273)
T PRK06182        157 SDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGSGRLSDPSVIADAISKAVTA  236 (273)
T ss_pred             HHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhhccccCCCHHHHHHHHHHHHhC
Confidence            999999999999999999999999998632110       00000    1122344455678889999999999999974

>PRK07832 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-37  Score=259.42  Aligned_cols=245  Identities=20%  Similarity=0.243  Sum_probs=206.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCc-EEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFK-VTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+.++...+++...+.. ..++.+|++|.++++++++++.+.+ +++
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i   79 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAH-GSM   79 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhc-CCC
Confidence            78999999999999999999999999999999998888777777654433 5567899999999999999999888 689


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC-CCCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      |+||||+|.....++.+.+.+++++.+++|+.+++.++++++|.|.++ ..++||++||..+..+.+....|+++|++++
T Consensus        80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~  159 (272)
T PRK07832         80 DVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLR  159 (272)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCCcchHHHHHHHH
Confidence            999999998777778889999999999999999999999999999764 3589999999998888899999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCC-C-chHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccc
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGP-E-GSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG  236 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G  236 (259)
                      +|+++++.|+.++||+++.++||+++|++........ . ........... ..++..+|+|+|+.+++++. ..+++++
T Consensus       160 ~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~vA~~~~~~~~-~~~~~~~  237 (272)
T PRK07832        160 GLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDR-FRGHAVTPEKAAEKILAGVE-KNRYLVY  237 (272)
T ss_pred             HHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHHh-cccCCCCHHHHHHHHHHHHh-cCCeEEe
Confidence            9999999999999999999999999999876532110 0 01111222111 24567899999999999995 5678999


Q ss_pred             cEEEeCCCceee
Q 024994          237 QIICVDGGVTVT  248 (259)
Q Consensus       237 ~~l~~dgG~~~~  248 (259)
                      +.+.+++|..+.
T Consensus       238 ~~~~~~~~~~~~  249 (272)
T PRK07832        238 TSPDIRALYWFK  249 (272)
T ss_pred             cCcchHHHHHHH
Confidence            988999886553

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=8.6e-37  Score=251.24  Aligned_cols=241  Identities=39%  Similarity=0.510  Sum_probs=215.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++||||++++||.+++++|+++|++|++++|+.++.+....++...+.++.++.+|++|.+++.++++++.+.+ +++|
T Consensus         6 ~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id   84 (246)
T PRK05653          6 KTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAF-GALD   84 (246)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHh-CCCC
Confidence            689999999999999999999999999999999988877777777667789999999999999999999998888 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      ++||++|.....+..+.+.+++++.++.|+.+++.+++.+.|+|.+.+.++||++||..+..+.++...|+.+|++++.+
T Consensus        85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~~~~~~  164 (246)
T PRK05653         85 ILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKAGVIGF  164 (246)
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCCCcHhHhHHHHHHHH
Confidence            99999998777777788999999999999999999999999999877778999999998888888899999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC  240 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~  240 (259)
                      +++++.++.+.+++++.++||.+.+++.....     ....+......+.+++.+++|+++.+.+++++...+++|+++.
T Consensus       165 ~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~  239 (246)
T PRK05653        165 TKALALELASRGITVNAVAPGFIDTDMTEGLP-----EEVKAEILKEIPLGRLGQPEEVANAVAFLASDAASYITGQVIP  239 (246)
T ss_pred             HHHHHHHHhhcCeEEEEEEeCCcCCcchhhhh-----HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEE
Confidence            99999999888999999999999998764311     1233445556777888999999999999998888899999999


Q ss_pred             eCCCcee
Q 024994          241 VDGGVTV  247 (259)
Q Consensus       241 ~dgG~~~  247 (259)
                      +|||..+
T Consensus       240 ~~gg~~~  246 (246)
T PRK05653        240 VNGGMYM  246 (246)
T ss_pred             eCCCeeC
Confidence            9999864

>PRK05650 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.5e-37  Score=256.52  Aligned_cols=226  Identities=21%  Similarity=0.269  Sum_probs=197.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+||||++++++|+++|++|++++|+.+.++....++...+.++.++++|++|.++++++++++.+.+ +++|
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~-~~id   79 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKW-GGID   79 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence            689999999999999999999999999999999999888888887767788999999999999999999999888 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||....+++.+.+.+++++++++|+.+++.+++.++|.|.+.+.++||++||..+..+.++...|+++|+++++|
T Consensus        80 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~  159 (270)
T PRK05650         80 VIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVAL  159 (270)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCCchHHHHHHHHHHHH
Confidence            99999999877788889999999999999999999999999999887779999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPA  230 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  230 (259)
                      +++++.|+.+.||+++.|+||+++|++.........   ...............+++|+++.++..+...
T Consensus       160 ~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~vA~~i~~~l~~~  226 (270)
T PRK05650        160 SETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNP---AMKAQVGKLLEKSPITAADIADYIYQQVAKG  226 (270)
T ss_pred             HHHHHHHhcccCcEEEEEecCccccCcccccccCch---hHHHHHHHHhhcCCCCHHHHHHHHHHHHhCC
Confidence            999999999999999999999999998765543221   1111112122234568999999999888643

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4e-37  Score=274.88  Aligned_cols=236  Identities=28%  Similarity=0.334  Sum_probs=202.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCCh--hHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ--IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||++|||++++++|+++|++|++++|..  +.+++..+++     ...++.+|++|.++++++++.+.+.+ ++
T Consensus       211 ~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~-----~~~~~~~Dv~~~~~~~~~~~~~~~~~-g~  284 (450)
T PRK08261        211 KVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRV-----GGTALALDITAPDAPARIAEHLAERH-GG  284 (450)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc-----CCeEEEEeCCCHHHHHHHHHHHHHhC-CC
Confidence            6899999999999999999999999999999853  3333333322     23577899999999999999999888 68


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      +|+||||||+.....+.+.+.++|++++++|+.+++.+.+++.+.+..+..++||++||..+..+.+++..|+++|++++
T Consensus       285 id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~~~~Y~asKaal~  364 (450)
T PRK08261        285 LDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQTNYAASKAGVI  364 (450)
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCChHHHHHHHHHH
Confidence            99999999998777888899999999999999999999999999765556799999999999999999999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI  238 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~  238 (259)
                      +|+++++.++.++||++|.|+||+++|++....+..     ..+......++.+...|+|+++++.|++++.+.++||+.
T Consensus       365 ~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~~-----~~~~~~~~~~l~~~~~p~dva~~~~~l~s~~~~~itG~~  439 (450)
T PRK08261        365 GLVQALAPLLAERGITINAVAPGFIETQMTAAIPFA-----TREAGRRMNSLQQGGLPVDVAETIAWLASPASGGVTGNV  439 (450)
T ss_pred             HHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccchh-----HHHHHhhcCCcCCCCCHHHHHHHHHHHhChhhcCCCCCE
Confidence            999999999999999999999999999887543221     112222345677888999999999999999899999999


Q ss_pred             EEeCCCcee
Q 024994          239 ICVDGGVTV  247 (259)
Q Consensus       239 l~~dgG~~~  247 (259)
                      +.+|||..+
T Consensus       440 i~v~g~~~~  448 (450)
T PRK08261        440 VRVCGQSLL  448 (450)
T ss_pred             EEECCCccc
Confidence            999998654

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=100.00  E-value=8e-39  Score=248.63  Aligned_cols=229  Identities=27%  Similarity=0.379  Sum_probs=193.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHH--hcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK--NKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |.+++||+.||||++++++|+++|..+.+++.+.+..+... +++  .+...+.|+++|+++..++++.++++.+++ +.
T Consensus         6 Kna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~a-kL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~f-g~   83 (261)
T KOG4169|consen    6 KNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIA-KLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATF-GT   83 (261)
T ss_pred             ceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHH-HHhccCCCceEEEEEeccccHHHHHHHHHHHHHHh-Cc
Confidence            78999999999999999999999999888888877765443 343  346689999999999999999999999999 79


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC---CCEEEEecCCCccCCCCCChhhhhhHH
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG---NGSIVFISSVGGVRGIPSVSLYGAYKG  155 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~~~ii~isS~~~~~~~~~~~~Y~~sK~  155 (259)
                      +|++||+||+.        +..+|++++.+|+.|.+.-+..++|+|.+++   +|-|||+||..|+.|.|..+.|++||+
T Consensus        84 iDIlINgAGi~--------~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY~AsKa  155 (261)
T KOG4169|consen   84 IDILINGAGIL--------DDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVYAASKA  155 (261)
T ss_pred             eEEEEcccccc--------cchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhhhhccc
Confidence            99999999985        5678999999999999999999999998764   689999999999999999999999999


Q ss_pred             HHHHHHHHHHHH--HccCCceEEEEeCCceeCCCCCCCcCCC----CchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCC
Q 024994          156 AMNQLTKNLACE--WAKDNIRTNTVAPWVIKTSMIKPFEEGP----EGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLP  229 (259)
Q Consensus       156 a~~~~~~~~a~e--~~~~gi~v~~v~pg~v~t~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  229 (259)
                      ++.+|+||+|..  |.+.||+++++|||++.|++.+.+....    ..+...+.+. ..|   ..+|.+++..+...++.
T Consensus       156 GVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~-~~~---~q~~~~~a~~~v~aiE~  231 (261)
T KOG4169|consen  156 GVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALE-RAP---KQSPACCAINIVNAIEY  231 (261)
T ss_pred             ceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHH-Hcc---cCCHHHHHHHHHHHHhh
Confidence            999999999887  5667999999999999999987653211    1112222222 222   45789999999888865


Q ss_pred             CCCCccccEEEeCCCce
Q 024994          230 AASYITGQIICVDGGVT  246 (259)
Q Consensus       230 ~~~~~~G~~l~~dgG~~  246 (259)
                         ..+|+++.+|+|..
T Consensus       232 ---~~NGaiw~v~~g~l  245 (261)
T KOG4169|consen  232 ---PKNGAIWKVDSGSL  245 (261)
T ss_pred             ---ccCCcEEEEecCcE
Confidence               57999999999863

>PRK08263 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.5e-37  Score=256.08  Aligned_cols=240  Identities=23%  Similarity=0.309  Sum_probs=201.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+|+||++++++|+++|++|++++|+.+.++.....+   +..+.++++|++|.++++++++++.+.+ +++|
T Consensus         4 k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~d   79 (275)
T PRK08263          4 KVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY---GDRLLPLALDVTDRAAVFAAVETAVEHF-GRLD   79 (275)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc---cCCeeEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence            68999999999999999999999999999999988776654433   3468888999999999999999999888 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      ++|||||....+++.+.+.+++++++++|+.+++.+++.++|.|++.+.+++|++||..+..+.+....|+++|++++++
T Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~  159 (275)
T PRK08263         80 IVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALEGM  159 (275)
T ss_pred             EEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCCccHHHHHHHHHHHH
Confidence            99999999888888899999999999999999999999999999887778999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcC--C--CCchHHHHhhhhcCCCCCC-CCHHHHHHHHHHHhCCCCCCcc
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE--G--PEGSEFLDGIARQTPIGRA-GEPDEVSSLVAFLCLPAASYIT  235 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~-~~~~~va~~~~~l~~~~~~~~~  235 (259)
                      +++++.++.+.||+++.++||+++|++......  .  ..............+..+. .+|+|+++.++++++..  ...
T Consensus       160 ~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~~l~~~~--~~~  237 (275)
T PRK08263        160 SEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSERSVDGDPEAAAEALLKLVDAE--NPP  237 (275)
T ss_pred             HHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHhccCCCCHHHHHHHHHHHHcCC--CCC
Confidence            999999999999999999999999998742211  1  1111222334444566667 89999999999999643  345


Q ss_pred             ccEEEeCCCce
Q 024994          236 GQIICVDGGVT  246 (259)
Q Consensus       236 G~~l~~dgG~~  246 (259)
                      ++++...+...
T Consensus       238 ~~~~~~~~~~~  248 (275)
T PRK08263        238 LRLFLGSGVLD  248 (275)
T ss_pred             eEEEeCchHHH
Confidence            56555444333

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=100.00  E-value=2.2e-36  Score=250.40  Aligned_cols=246  Identities=33%  Similarity=0.391  Sum_probs=210.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++||||++|+||++++++|+++|++|++++|+.+..+.+..++...+.++.++++|++|.++++++++++.+.+ +++|
T Consensus         2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~d   80 (255)
T TIGR01963         2 KTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEF-GGLD   80 (255)
T ss_pred             CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhc-CCCC
Confidence            689999999999999999999999999999999988887777776556678999999999999999999999888 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +|||++|.....+..+.+.++++++++.|+.+++.+++.+++.|.+.+.+++|++||..+..+.+.+..|+.+|++++++
T Consensus        81 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~sk~a~~~~  160 (255)
T TIGR01963        81 ILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLIGL  160 (255)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCCCchhHHHHHHHHHH
Confidence            99999998877777778899999999999999999999999999887778999999998888888999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcC------CCC-chHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE------GPE-GSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASY  233 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~------~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  233 (259)
                      +++++.++.+.+++++.++||+++|++......      ... ............+...+.+++|+++++++++++....
T Consensus       161 ~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~  240 (255)
T TIGR01963       161 TKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVAETALFLASDAAAG  240 (255)
T ss_pred             HHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcCHHHHHHHHHHHcCccccC
Confidence            999999998889999999999999987532111      000 0111112223445566889999999999999876677


Q ss_pred             ccccEEEeCCCcee
Q 024994          234 ITGQIICVDGGVTV  247 (259)
Q Consensus       234 ~~G~~l~~dgG~~~  247 (259)
                      ++|+.+++|||+..
T Consensus       241 ~~g~~~~~~~g~~~  254 (255)
T TIGR01963       241 ITGQAIVLDGGWTA  254 (255)
T ss_pred             ccceEEEEcCcccc
Confidence            89999999999864

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.2e-36  Score=250.05  Aligned_cols=243  Identities=33%  Similarity=0.434  Sum_probs=203.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeC-ChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSR-NQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||+++||++++++|+++|++|++..| +.+........+...+.++.++.+|+++.++++++++++.+.+ +++
T Consensus         7 ~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~   85 (252)
T PRK06077          7 KVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRY-GVA   85 (252)
T ss_pred             cEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHc-CCC
Confidence            68999999999999999999999999887765 4445555555555555578889999999999999999999988 689


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      |+||||||.....+..+.+.+++++++++|+.+++.+++++.|+|.+  .+++|++||..+..+.++...|+++|+++++
T Consensus        86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~  163 (252)
T PRK06077         86 DILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMRE--GGAIVNIASVAGIRPAYGLSIYGAMKAAVIN  163 (252)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhc--CcEEEEEcchhccCCCCCchHHHHHHHHHHH
Confidence            99999999987778888889999999999999999999999999865  3799999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      ++++++.++.+ +|+++.+.||+++|++........... .........+.+++.+|+|++++++++++  ....+|+.+
T Consensus       164 ~~~~l~~~~~~-~i~v~~v~Pg~i~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~dva~~~~~~~~--~~~~~g~~~  239 (252)
T PRK06077        164 LTKYLALELAP-KIRVNAIAPGFVKTKLGESLFKVLGMS-EKEFAEKFTLMGKILDPEEVAEFVAAILK--IESITGQVF  239 (252)
T ss_pred             HHHHHHHHHhc-CCEEEEEeeCCccChHHHhhhhccccc-HHHHHHhcCcCCCCCCHHHHHHHHHHHhC--ccccCCCeE
Confidence            99999999988 899999999999999864432211100 11111223456678999999999999995  346799999


Q ss_pred             EeCCCceeeec
Q 024994          240 CVDGGVTVTVN  250 (259)
Q Consensus       240 ~~dgG~~~~~~  250 (259)
                      ++|+|.++..+
T Consensus       240 ~i~~g~~~~~~  250 (252)
T PRK06077        240 VLDSGESLKGG  250 (252)
T ss_pred             EecCCeeccCC
Confidence            99999887644

>PRK07041 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.9e-37  Score=249.58  Aligned_cols=229  Identities=26%  Similarity=0.416  Sum_probs=194.9

Q ss_pred             EEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCccEEE
Q 024994            4 LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILI   83 (259)
Q Consensus         4 lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~vi   83 (259)
                      |||||++|||++++++|+++|++|++++|+.+.++....++.. +.++.++.+|++|.++++++++++     +++|++|
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~-----~~id~li   74 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG-GAPVRTAALDITDEAAVDAFFAEA-----GPFDHVV   74 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CCceEEEEccCCCHHHHHHHHHhc-----CCCCEEE
Confidence            6999999999999999999999999999998887776666542 557889999999999998888764     6899999


Q ss_pred             EcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHHHHH
Q 024994           84 NNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKN  163 (259)
Q Consensus        84 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~  163 (259)
                      ||+|.....++.+.+.+++++++++|+.+++.+++  .+.+.  +.++||++||..+..+.++...|+++|+++++++++
T Consensus        75 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~--~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~  150 (230)
T PRK07041         75 ITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVAR--AARIA--PGGSLTFVSGFAAVRPSASGVLQGAINAALEALARG  150 (230)
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhc--CCeEEEEECchhhcCCCCcchHHHHHHHHHHHHHHH
Confidence            99999877778888999999999999999999999  34443  468999999999999999999999999999999999


Q ss_pred             HHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCC
Q 024994          164 LACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVDG  243 (259)
Q Consensus       164 ~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dg  243 (259)
                      ++.|+.+  ||++.++||+++|++....... .............|.++..+|+|+++++.+++++  .+++|+.+.+||
T Consensus       151 la~e~~~--irv~~i~pg~~~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~--~~~~G~~~~v~g  225 (230)
T PRK07041        151 LALELAP--VRVNTVSPGLVDTPLWSKLAGD-AREAMFAAAAERLPARRVGQPEDVANAILFLAAN--GFTTGSTVLVDG  225 (230)
T ss_pred             HHHHhhC--ceEEEEeecccccHHHHhhhcc-chHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcC--CCcCCcEEEeCC
Confidence            9999864  9999999999999986543221 1122334445567788889999999999999974  589999999999


Q ss_pred             Ccee
Q 024994          244 GVTV  247 (259)
Q Consensus       244 G~~~  247 (259)
                      |+.+
T Consensus       226 g~~~  229 (230)
T PRK07041        226 GHAI  229 (230)
T ss_pred             Ceec
Confidence            9764

>PRK07454 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-36  Score=248.90  Aligned_cols=226  Identities=27%  Similarity=0.340  Sum_probs=197.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+++||.+++++|+++|++|++++|+.++.+...+++...+.++.++++|++|.+++.++++++.+.+ +++|
T Consensus         7 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id   85 (241)
T PRK07454          7 PRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQF-GCPD   85 (241)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence            689999999999999999999999999999999988877777776656688999999999999999999999988 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||+|.....++.+.+.+++++++++|+.+++.+++.++|+|.+.+.++||++||..+..+.+++..|+.+|++++.+
T Consensus        86 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~~  165 (241)
T PRK07454         86 VLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAALAAF  165 (241)
T ss_pred             EEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCCccHHHHHHHHHHHH
Confidence            99999998766777888999999999999999999999999999887779999999999988888999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI  238 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~  238 (259)
                      +++++.++.+.|++++.|+||++.|++.......           ......+..+++|+++++.+++++....+.+++
T Consensus       166 ~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~~~-----------~~~~~~~~~~~~~va~~~~~l~~~~~~~~~~~~  232 (241)
T PRK07454        166 TKCLAEEERSHGIRVCTITLGAVNTPLWDTETVQ-----------ADFDRSAMLSPEQVAQTILHLAQLPPSAVIEDL  232 (241)
T ss_pred             HHHHHHHhhhhCCEEEEEecCcccCCcccccccc-----------cccccccCCCHHHHHHHHHHHHcCCccceeeeE
Confidence            9999999999999999999999999985431110           011123567899999999999997766555543

>PRK07024 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-36  Score=251.59  Aligned_cols=214  Identities=25%  Similarity=0.288  Sum_probs=186.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||.+++++|+++|++|++++|+.+.+++..+++...+ ++.++.+|++|.++++++++++.+++ +++|
T Consensus         3 ~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~i~~~~~~~~~~~-g~id   80 (257)
T PRK07024          3 LKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAA-RVSVYAADVRDADALAAAAADFIAAH-GLPD   80 (257)
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCC-eeEEEEcCCCCHHHHHHHHHHHHHhC-CCCC
Confidence            689999999999999999999999999999999988877766654333 78899999999999999999999988 6899


Q ss_pred             EEEEcCCCCCCCCCC-CCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAFVKPTV-DITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~-~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      ++|||+|........ +.+.+++++++++|+.+++.+++.++|.|.+.+.++||++||..+..+.+....|++||++++.
T Consensus        81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~  160 (257)
T PRK07024         81 VVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYSASKAAAIK  160 (257)
T ss_pred             EEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCCcchHHHHHHHHH
Confidence            999999986543333 3688999999999999999999999999988878999999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCC
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAA  231 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  231 (259)
                      |+++++.|+.++||++++++||+++|++......               +.....+|+++++.+...+....
T Consensus       161 ~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---------------~~~~~~~~~~~a~~~~~~l~~~~  217 (257)
T PRK07024        161 YLESLRVELRPAGVRVVTIAPGYIRTPMTAHNPY---------------PMPFLMDADRFAARAARAIARGR  217 (257)
T ss_pred             HHHHHHHHhhccCcEEEEEecCCCcCchhhcCCC---------------CCCCccCHHHHHHHHHHHHhCCC
Confidence            9999999999999999999999999997643211               11123579999999998886543

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=6.6e-36  Score=246.26  Aligned_cols=241  Identities=37%  Similarity=0.526  Sum_probs=208.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChh-HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI-ELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||+|+||.+++++|+++|++|+++.|+.. ..+...+.+...+.++.++.+|++|.++++++++++.+.+ +++
T Consensus         7 ~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-~~i   85 (249)
T PRK12825          7 RVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERF-GRI   85 (249)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHc-CCC
Confidence            68999999999999999999999999888666544 4445555555556678999999999999999999998887 689


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      |.+||++|.....++.+.+.+++++++++|+.+++.+++.+.+++.+.+.+++|++||..+..+.++...|+.+|+++++
T Consensus        86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~~~~y~~sK~~~~~  165 (249)
T PRK12825         86 DILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKAGLVG  165 (249)
T ss_pred             CEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCCchHHHHHHHHHHH
Confidence            99999999877777778899999999999999999999999999988778999999999998888889999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      +++.++.++.+.|++++.++||.++|++........    .... ....|.+++.+++|+++.+.++++....+++|+++
T Consensus       166 ~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~  240 (249)
T PRK12825        166 LTKALARELAEYGITVNMVAPGDIDTDMKEATIEEA----REAK-DAETPLGRSGTPEDIARAVAFLCSDASDYITGQVI  240 (249)
T ss_pred             HHHHHHHHHhhcCeEEEEEEECCccCCccccccchh----HHhh-hccCCCCCCcCHHHHHHHHHHHhCccccCcCCCEE
Confidence            999999999888999999999999999875532211    1111 22457778899999999999999877789999999


Q ss_pred             EeCCCcee
Q 024994          240 CVDGGVTV  247 (259)
Q Consensus       240 ~~dgG~~~  247 (259)
                      .++||..+
T Consensus       241 ~i~~g~~~  248 (249)
T PRK12825        241 EVTGGVDV  248 (249)
T ss_pred             EeCCCEee
Confidence            99999764

>PRK05993 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-36  Score=255.02  Aligned_cols=224  Identities=21%  Similarity=0.231  Sum_probs=187.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+||||++++++|+++|++|++++|+.+.++++..      ..+.++.+|++|.++++++++++.+.+++++|
T Consensus         5 k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~------~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id   78 (277)
T PRK05993          5 RSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA------EGLEAFQLDYAEPESIAALVAQVLELSGGRLD   78 (277)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH------CCceEEEccCCCHHHHHHHHHHHHHHcCCCcc
Confidence            689999999999999999999999999999999887765432      14778899999999999999999887756899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||....+++.+.+.+++++++++|+.+++.+++.++|.|.+.+.++||++||..+..+.++...|++||+++++|
T Consensus        79 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~  158 (277)
T PRK05993         79 ALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAIEGL  158 (277)
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCccchHHHHHHHHHHH
Confidence            99999999888888889999999999999999999999999999988789999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCC----------CCchHHH---Hhhhh-cCCCCCCCCHHHHHHHHHHH
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEG----------PEGSEFL---DGIAR-QTPIGRAGEPDEVSSLVAFL  226 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~----------~~~~~~~---~~~~~-~~~~~~~~~~~~va~~~~~l  226 (259)
                      +++++.|+.++||+++.|+||+++|++.......          .......   ..... ..+.....+|+++++.++..
T Consensus       159 ~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i~~a  238 (277)
T PRK05993        159 SLTLRMELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQMARLEGGGSKSRFKLGPEAVYAVLLHA  238 (277)
T ss_pred             HHHHHHHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHHhhhhccccCCCHHHHHHHHHHH
Confidence            9999999999999999999999999987543110          0000010   11111 11223356899999999988


Q ss_pred             hCCC
Q 024994          227 CLPA  230 (259)
Q Consensus       227 ~~~~  230 (259)
                      +...
T Consensus       239 ~~~~  242 (277)
T PRK05993        239 LTAP  242 (277)
T ss_pred             HcCC
Confidence            8654

>PRK07825 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-36  Score=252.38  Aligned_cols=211  Identities=25%  Similarity=0.322  Sum_probs=189.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++||||||||||++++++|+++|++|++++|+.+++++..+++.    ++.++.+|++|.++++++++++.+.+ +++|
T Consensus         6 ~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id   80 (273)
T PRK07825          6 KVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG----LVVGGPLDVTDPASFAAFLDAVEADL-GPID   80 (273)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc----cceEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence            689999999999999999999999999999999988877665542    57788999999999999999999988 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      ++|||||....+++.+.+.+++++++++|+.+++.+++.++|.|.+++.++||++||.++..+.++...|++||+++++|
T Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~  160 (273)
T PRK07825         81 VLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHAVVGF  160 (273)
T ss_pred             EEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCCcchHHHHHHHHHH
Confidence            99999999877888888999999999999999999999999999988889999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPA  230 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  230 (259)
                      +++++.|+.+.||+++.|+||++.|++.......              ......+++|+++.+.+++...
T Consensus       161 ~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~~~~--------------~~~~~~~~~~va~~~~~~l~~~  216 (273)
T PRK07825        161 TDAARLELRGTGVHVSVVLPSFVNTELIAGTGGA--------------KGFKNVEPEDVAAAIVGTVAKP  216 (273)
T ss_pred             HHHHHHHhhccCcEEEEEeCCcCcchhhcccccc--------------cCCCCCCHHHHHHHHHHHHhCC
Confidence            9999999999999999999999999986543110              1123568999999999988754

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=100.00  E-value=1.4e-36  Score=249.00  Aligned_cols=220  Identities=25%  Similarity=0.310  Sum_probs=184.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCC--CEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFG--AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||++|||++++++|+++|  ..|++..|+....        ....++.++++|+++.++++++.+    ++ ++
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~--------~~~~~~~~~~~Dls~~~~~~~~~~----~~-~~   67 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD--------FQHDNVQWHALDVTDEAEIKQLSE----QF-TQ   67 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc--------cccCceEEEEecCCCHHHHHHHHH----hc-CC
Confidence            789999999999999999999985  5677777755321        113478899999999999887544    34 68


Q ss_pred             ccEEEEcCCCCCC------CCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccC---CCCCChh
Q 024994           79 LNILINNAAIAFV------KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR---GIPSVSL  149 (259)
Q Consensus        79 id~vi~~ag~~~~------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~---~~~~~~~  149 (259)
                      +|+||||||....      .++.+.+.+.|++.+++|+.+++.+++.++|.|.+.+.++++++||..+..   +.+++..
T Consensus        68 id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~~~~~~~~  147 (235)
T PRK09009         68 LDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNRLGGWYS  147 (235)
T ss_pred             CCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccCCCCCcch
Confidence            9999999998642      346677889999999999999999999999999877678999999865532   3466789


Q ss_pred             hhhhHHHHHHHHHHHHHHHcc--CCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHh
Q 024994          150 YGAYKGAMNQLTKNLACEWAK--DNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLC  227 (259)
Q Consensus       150 Y~~sK~a~~~~~~~~a~e~~~--~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  227 (259)
                      |+++|+++++|+++++.|+.+  .+|+|+.|+||+++|++....             ....|.+++.+|+|+++.+.+++
T Consensus       148 Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~-------------~~~~~~~~~~~~~~~a~~~~~l~  214 (235)
T PRK09009        148 YRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPF-------------QQNVPKGKLFTPEYVAQCLLGII  214 (235)
T ss_pred             hhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcch-------------hhccccCCCCCHHHHHHHHHHHH
Confidence            999999999999999999977  589999999999999986532             12345677889999999999999


Q ss_pred             CCCCCCccccEEEeCCCce
Q 024994          228 LPAASYITGQIICVDGGVT  246 (259)
Q Consensus       228 ~~~~~~~~G~~l~~dgG~~  246 (259)
                      ++..++++|+++.+|||+.
T Consensus       215 ~~~~~~~~g~~~~~~g~~~  233 (235)
T PRK09009        215 ANATPAQSGSFLAYDGETL  233 (235)
T ss_pred             HcCChhhCCcEEeeCCcCC
Confidence            9888899999999999874

>PRK06180 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.7e-36  Score=251.30  Aligned_cols=226  Identities=19%  Similarity=0.237  Sum_probs=191.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+||||++++++|+++|++|++++|+.++++.+...   .+.++.++++|++|.+++.++++++.+.+ +++|
T Consensus         5 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~---~~~~~~~~~~D~~d~~~~~~~~~~~~~~~-~~~d   80 (277)
T PRK06180          5 KTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL---HPDRALARLLDVTDFDAIDAVVADAEATF-GPID   80 (277)
T ss_pred             CEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh---cCCCeeEEEccCCCHHHHHHHHHHHHHHh-CCCC
Confidence            5899999999999999999999999999999998876654332   24468889999999999999999999988 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||....++..+.+.++|++++++|+.+++.++++++|+|++.+.++||++||.++..+.+++..|+++|++++++
T Consensus        81 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~~~~Y~~sK~a~~~~  160 (277)
T PRK06180         81 VLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALEGI  160 (277)
T ss_pred             EEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCCcchhHHHHHHHHHH
Confidence            99999999877788889999999999999999999999999999887778999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCC--CCchHH---HHh---hhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEG--PEGSEF---LDG---IARQTPIGRAGEPDEVSSLVAFLCLPA  230 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~--~~~~~~---~~~---~~~~~~~~~~~~~~~va~~~~~l~~~~  230 (259)
                      +++++.++.+.|+++++++||+++|++.......  ......   ...   .....+..++.+|+|+++++.+++...
T Consensus       161 ~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~~~  238 (277)
T PRK06180        161 SESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQPGDPAKAAQAILAAVESD  238 (277)
T ss_pred             HHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHcCC
Confidence            9999999998999999999999999875432111  000101   111   112234556789999999999998754

>PRK12829 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.2e-36  Score=248.64  Aligned_cols=243  Identities=37%  Similarity=0.541  Sum_probs=207.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+|+||++++++|+++|++|++++|+.+..+...++....  ++.++.+|++|.++++.+++++.+.+ +++|
T Consensus        12 ~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~d   88 (264)
T PRK12829         12 LRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGA--KVTATVADVADPAQVERVFDTAVERF-GGLD   88 (264)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcC--ceEEEEccCCCHHHHHHHHHHHHHHh-CCCC
Confidence            68999999999999999999999999999999988776665554322  57889999999999999999999888 6899


Q ss_pred             EEEEcCCCC-CCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCC-CEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           81 ILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGN-GSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        81 ~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      +|||++|.. ...+..+.+.+++++++++|+.+++.+++.+++.+...+. ++|+++||..+..+.+.+..|+.+|++++
T Consensus        89 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~~~y~~~K~a~~  168 (264)
T PRK12829         89 VLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAASKWAVV  168 (264)
T ss_pred             EEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCCchhHHHHHHHH
Confidence            999999987 5556777889999999999999999999999999877655 78999999888888888999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcC------CCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCC
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE------GPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAAS  232 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  232 (259)
                      +++++++.++.+.+++++.++||+++|++......      ...............|..++.+++|+++++.+++++...
T Consensus       169 ~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~  248 (264)
T PRK12829        169 GLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDIAATALFLASPAAR  248 (264)
T ss_pred             HHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccc
Confidence            99999999998889999999999999998643321      111112233344456777899999999999999987667


Q ss_pred             CccccEEEeCCCce
Q 024994          233 YITGQIICVDGGVT  246 (259)
Q Consensus       233 ~~~G~~l~~dgG~~  246 (259)
                      +++|+.+.+|||..
T Consensus       249 ~~~g~~~~i~~g~~  262 (264)
T PRK12829        249 YITGQAISVDGNVE  262 (264)
T ss_pred             CccCcEEEeCCCcc
Confidence            88999999999965

>PRK05855 short chain dehydrogenase; Validated

Probab=100.00  E-value=2.7e-36  Score=277.29  Aligned_cols=229  Identities=24%  Similarity=0.258  Sum_probs=198.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      +++|||||+||||++++++|+++|++|++++|+.+++++..+++...+.++.++++|++|.+++.++++++.+.+ +++|
T Consensus       316 ~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~-g~id  394 (582)
T PRK05855        316 KLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEH-GVPD  394 (582)
T ss_pred             CEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhc-CCCc
Confidence            589999999999999999999999999999999999888888777666789999999999999999999999888 7899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      +||||||+...+++.+.+.+++++++++|+.+++.++++++|.|.+++ .|+||++||.++..+.++...|++||+++++
T Consensus       395 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~  474 (582)
T PRK05855        395 IVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKAAVLM  474 (582)
T ss_pred             EEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCCcHHHHHHHHHHH
Confidence            999999998878888899999999999999999999999999998765 4899999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCch---HHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGS---EFLDGIARQTPIGRAGEPDEVSSLVAFLCLPA  230 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  230 (259)
                      |+++++.|+.++||+|++|+||+++|++...........   ..........+..+..+|+++++.+++.++..
T Consensus       475 ~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~~~~~~  548 (582)
T PRK05855        475 LSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQRRGYGPEKVAKAIVDAVKRN  548 (582)
T ss_pred             HHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhccccCCCHHHHHHHHHHHHHcC
Confidence            999999999999999999999999999876543211100   01111112223345568999999999999754

>PRK09135 pteridine reductase; Provisional

Probab=100.00  E-value=1.2e-35  Score=245.05  Aligned_cols=240  Identities=33%  Similarity=0.441  Sum_probs=202.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCCh-hHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ-IELDARLHEWKNK-GFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||+|+||++++++|+++|++|++++|+. +..+.....+... ...+.++.+|++|.+++.++++++.+.+ ++
T Consensus         7 ~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~   85 (249)
T PRK09135          7 KVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAF-GR   85 (249)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHc-CC
Confidence            5899999999999999999999999999999864 4455544444432 3468889999999999999999999888 68


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      +|+||||||.....++.+.+.+++++++++|+.+++.+++++.|++.+. .+.+++++|..+..+.++...|+.||++++
T Consensus        86 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~  164 (249)
T PRK09135         86 LDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ-RGAIVNITDIHAERPLKGYPVYCAAKAALE  164 (249)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC-CeEEEEEeChhhcCCCCCchhHHHHHHHHH
Confidence            9999999998777777778889999999999999999999999998765 478999998888888888999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI  238 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~  238 (259)
                      .++++++.++.+ +++++.++||+++|+......    ............+..+..+++|+++++.+++.+ ..+.+|++
T Consensus       165 ~~~~~l~~~~~~-~i~~~~v~pg~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~-~~~~~g~~  238 (249)
T PRK09135        165 MLTRSLALELAP-EVRVNAVAPGAILWPEDGNSF----DEEARQAILARTPLKRIGTPEDIAEAVRFLLAD-ASFITGQI  238 (249)
T ss_pred             HHHHHHHHHHCC-CCeEEEEEeccccCccccccC----CHHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCc-cccccCcE
Confidence            999999999865 699999999999999864321    112334445566778888999999999888874 45789999


Q ss_pred             EEeCCCceee
Q 024994          239 ICVDGGVTVT  248 (259)
Q Consensus       239 l~~dgG~~~~  248 (259)
                      +++++|...+
T Consensus       239 ~~i~~g~~~~  248 (249)
T PRK09135        239 LAVDGGRSLT  248 (249)
T ss_pred             EEECCCeecc
Confidence            9999998754

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=100.00  E-value=1.2e-35  Score=243.69  Aligned_cols=237  Identities=40%  Similarity=0.559  Sum_probs=207.6

Q ss_pred             EEEEcCcchHHHHHHHHHHHCCCEEEEeeCCh-hHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCccE
Q 024994            3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQ-IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNI   81 (259)
Q Consensus         3 ~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~   81 (259)
                      +||||++++||.+++++|+++|++|++++|+. +..+...+.+...+.+++++.+|++|.++++++++++.+.+ +++|+
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id~   79 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEEL-GPIDI   79 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh-CCCCE
Confidence            58999999999999999999999999999875 45555556666556678999999999999999999998888 68999


Q ss_pred             EEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHHH
Q 024994           82 LINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLT  161 (259)
Q Consensus        82 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~~  161 (259)
                      |||++|.....+..+.+.+++++++++|+.+++.+++.+.+++.+.+.++++++||..+..+.+++..|+++|++++.++
T Consensus        80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~~~y~~~k~a~~~~~  159 (239)
T TIGR01830        80 LVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFT  159 (239)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCCchhHHHHHHHHHHH
Confidence            99999987666677788999999999999999999999999997776789999999999999999999999999999999


Q ss_pred             HHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEEe
Q 024994          162 KNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV  241 (259)
Q Consensus       162 ~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~~  241 (259)
                      ++++.++.+.|++++.++||+++|++.....     ......+....+..++.+++|+++.+++++++...+++|+++++
T Consensus       160 ~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~  234 (239)
T TIGR01830       160 KSLAKELASRNITVNAVAPGFIDTDMTDKLS-----EKVKKKILSQIPLGRFGTPEEVANAVAFLASDEASYITGQVIHV  234 (239)
T ss_pred             HHHHHHHhhcCeEEEEEEECCCCChhhhhcC-----hHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCcccCCcCCCEEEe
Confidence            9999999889999999999999998754321     11333445667788899999999999999988778899999999


Q ss_pred             CCCc
Q 024994          242 DGGV  245 (259)
Q Consensus       242 dgG~  245 (259)
                      |+|.
T Consensus       235 ~~g~  238 (239)
T TIGR01830       235 DGGM  238 (239)
T ss_pred             CCCc
Confidence            9985

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK06924 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-36  Score=250.30  Aligned_cols=239  Identities=22%  Similarity=0.232  Sum_probs=196.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCCh-hHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC-C
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ-IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG-K   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~-~   78 (259)
                      |++|||||+||||++++++|+++|++|++++|+. +.++...+   ..+.+++++++|++|.++++++++++.+.++. .
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~   78 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAE---QYNSNLTFHSLDLQDVHELETNFNEILSSIQEDN   78 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHh---ccCCceEEEEecCCCHHHHHHHHHHHHHhcCccc
Confidence            6899999999999999999999999999999987 33333222   22457889999999999999999998876621 1


Q ss_pred             --ccEEEEcCCCCC-CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC-CCCEEEEecCCCccCCCCCChhhhhhH
Q 024994           79 --LNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVGGVRGIPSVSLYGAYK  154 (259)
Q Consensus        79 --id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~isS~~~~~~~~~~~~Y~~sK  154 (259)
                        .+++|||+|... ..++.+.+.++|++.+++|+.+++.+++.++|+|.+. ..++||++||..+..+.+++..|+++|
T Consensus        79 ~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  158 (251)
T PRK06924         79 VSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSSK  158 (251)
T ss_pred             CCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCCcHHHhHHH
Confidence              238999999854 3567788999999999999999999999999999874 357999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHc--cCCceEEEEeCCceeCCCCCCCcCC-CCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCC
Q 024994          155 GAMNQLTKNLACEWA--KDNIRTNTVAPWVIKTSMIKPFEEG-PEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAA  231 (259)
Q Consensus       155 ~a~~~~~~~~a~e~~--~~gi~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  231 (259)
                      +++++|+++++.|+.  +.+|+|++|+||++.|++....... .......+.+....+.+++.+|+|+++.+++++++. 
T Consensus       159 aa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~-  237 (251)
T PRK06924        159 AGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLKEEGKLLSPEYVAKALRNLLETE-  237 (251)
T ss_pred             HHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHhhcCCcCCHHHHHHHHHHHHhcc-
Confidence            999999999999975  4689999999999999986532111 111112334455567788999999999999999874 


Q ss_pred             CCccccEEEeCC
Q 024994          232 SYITGQIICVDG  243 (259)
Q Consensus       232 ~~~~G~~l~~dg  243 (259)
                      .+++|+.+.+|.
T Consensus       238 ~~~~G~~~~v~~  249 (251)
T PRK06924        238 DFPNGEVIDIDE  249 (251)
T ss_pred             cCCCCCEeehhh
Confidence            789999999875

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=100.00  E-value=1.3e-35  Score=245.30  Aligned_cols=233  Identities=21%  Similarity=0.299  Sum_probs=193.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+++||||+||||.+++++|+++|++|++++|+.++++....++   +.++.++.+|++|.++++++++++.+.+ +++|
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~i~~~~~~~~~~~-~~id   76 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL---GDNLYIAQLDVRNRAAIEEMLASLPAEW-RNID   76 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---ccceEEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence            68999999999999999999999999999999988776655443   3468889999999999999999999888 6899


Q ss_pred             EEEEcCCCCC-CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      +|||+||... ..+..+.+.++|++++++|+.+++.+++.++|+|.+.+.+++|++||..+..+.++...|+++|+++++
T Consensus        77 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~  156 (248)
T PRK10538         77 VLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQ  156 (248)
T ss_pred             EEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCCCchhHHHHHHHHH
Confidence            9999999753 346777899999999999999999999999999988777899999999998888889999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      |++.++.++.+.+|+++.|+||++.|+................    ........+|+|+++++.|+++....+.+++..
T Consensus       157 ~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~~  232 (248)
T PRK10538        157 FSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEK----TYQNTVALTPEDVSEAVWWVATLPAHVNINTLE  232 (248)
T ss_pred             HHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHHHh----hccccCCCCHHHHHHHHHHHhcCCCcccchhhc
Confidence            9999999999999999999999998555432211111110111    111224568999999999999877777777654


Q ss_pred             Ee
Q 024994          240 CV  241 (259)
Q Consensus       240 ~~  241 (259)
                      ..
T Consensus       233 ~~  234 (248)
T PRK10538        233 MM  234 (248)
T ss_pred             cc
Confidence            43

>PRK08324 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.1e-35  Score=276.94  Aligned_cols=246  Identities=32%  Similarity=0.403  Sum_probs=215.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+||||++++++|+++|++|++++|+.+.++...+++... .++.++.+|++|.++++++++++.+.+ +++|
T Consensus       423 k~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~-~~v~~v~~Dvtd~~~v~~~~~~~~~~~-g~iD  500 (681)
T PRK08324        423 KVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP-DRALGVACDVTDEAAVQAAFEEAALAF-GGVD  500 (681)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc-CcEEEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence            68999999999999999999999999999999998887777666543 578899999999999999999999988 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCC-CEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGN-GSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.+++.+.+.|++++. ++||++||..+..+.++...|+++|+++++
T Consensus       501 vvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~~~Y~asKaa~~~  580 (681)
T PRK08324        501 IVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAKAAELH  580 (681)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCcHHHHHHHHHHHH
Confidence            9999999988888888999999999999999999999999999988764 899999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCce--eCCCCCCCcC-------CCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVI--KTSMIKPFEE-------GPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPA  230 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v--~t~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  230 (259)
                      ++++++.++.+.||++|.|+||.+  .|++......       ........+.+....+.++...++|+++++++++++.
T Consensus       581 l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~DvA~a~~~l~s~~  660 (681)
T PRK08324        581 LVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREVTPEDVAEAVVFLASGL  660 (681)
T ss_pred             HHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCcCCccCHHHHHHHHHHHhCcc
Confidence            999999999999999999999999  7876543210       1111112234566778889999999999999999877


Q ss_pred             CCCccccEEEeCCCceee
Q 024994          231 ASYITGQIICVDGGVTVT  248 (259)
Q Consensus       231 ~~~~~G~~l~~dgG~~~~  248 (259)
                      ....+|+++++|||....
T Consensus       661 ~~~~tG~~i~vdgG~~~~  678 (681)
T PRK08324        661 LSKTTGAIITVDGGNAAA  678 (681)
T ss_pred             ccCCcCCEEEECCCchhc
Confidence            788999999999997643

>PRK06196 oxidoreductase; Provisional

Probab=100.00  E-value=4.1e-36  Score=256.59  Aligned_cols=235  Identities=24%  Similarity=0.252  Sum_probs=188.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.++.++..+++.    .+.++++|++|.++++++++++.+.+ +++|
T Consensus        27 k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~----~v~~~~~Dl~d~~~v~~~~~~~~~~~-~~iD  101 (315)
T PRK06196         27 KTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID----GVEVVMLDLADLESVRAFAERFLDSG-RRID  101 (315)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh----hCeEEEccCCCHHHHHHHHHHHHhcC-CCCC
Confidence            689999999999999999999999999999999888777666553    37889999999999999999998887 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccC------------CCCCCh
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR------------GIPSVS  148 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~------------~~~~~~  148 (259)
                      +||||||....  ..+.+.++|+..+++|+.+++.+++.++|.|.+.+.++||++||..+..            +.+++.
T Consensus       102 ~li~nAg~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~  179 (315)
T PRK06196        102 ILINNAGVMAC--PETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGYDKWL  179 (315)
T ss_pred             EEEECCCCCCC--CCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCCCChHH
Confidence            99999997542  2345678899999999999999999999999887678999999975532            334567


Q ss_pred             hhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhh-hcCCCC-CCCCHHHHHHHHHHH
Q 024994          149 LYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIA-RQTPIG-RAGEPDEVSSLVAFL  226 (259)
Q Consensus       149 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~va~~~~~l  226 (259)
                      .|+.||++++.+++.++.++.+.||++++|+||+++|++..........  ...... ...+++ +..+|++++..++|+
T Consensus       180 ~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~l  257 (315)
T PRK06196        180 AYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQV--ALGWVDEHGNPIDPGFKTPAQGAATQVWA  257 (315)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhh--hhhhhhhhhhhhhhhcCCHhHHHHHHHHH
Confidence            8999999999999999999999999999999999999987554321110  001111 112332 567899999999999


Q ss_pred             hCCCCCCccccEEEeCCC
Q 024994          227 CLPAASYITGQIICVDGG  244 (259)
Q Consensus       227 ~~~~~~~~~G~~l~~dgG  244 (259)
                      ++......+|..+..|.+
T Consensus       258 ~~~~~~~~~~g~~~~~~~  275 (315)
T PRK06196        258 ATSPQLAGMGGLYCEDCD  275 (315)
T ss_pred             hcCCccCCCCCeEeCCCc
Confidence            975544444555555543

>PRK12828 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.9e-36  Score=244.29  Aligned_cols=231  Identities=29%  Similarity=0.377  Sum_probs=202.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++||||++|+||.+++++|+++|++|++++|+.++..+..+++...  .+.++.+|++|.++++++++++.+.+ +++|
T Consensus         8 k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~d   84 (239)
T PRK12828          8 KVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPAD--ALRIGGIDLVDPQAARRAVDEVNRQF-GRLD   84 (239)
T ss_pred             CEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhc--CceEEEeecCCHHHHHHHHHHHHHHh-CCcC
Confidence            68999999999999999999999999999999988776666555432  45677899999999999999999988 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +|||++|.....+..+.+.+++++.+++|+.+++.+++++.+.+.+.+.+++|++||..+..+.+....|+++|++++.+
T Consensus        85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~a~~~~  164 (239)
T PRK12828         85 ALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAKAGVARL  164 (239)
T ss_pred             EEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCCcchhHHHHHHHHHH
Confidence            99999998766667778899999999999999999999999999887789999999999988888899999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC  240 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~  240 (259)
                      +++++.++.+.+++++.++||+++|++.......             .+...+.+++|+++++.+++++...+++|+.+.
T Consensus       165 ~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~~~-------------~~~~~~~~~~dva~~~~~~l~~~~~~~~g~~~~  231 (239)
T PRK12828        165 TEALAAELLDRGITVNAVLPSIIDTPPNRADMPD-------------ADFSRWVTPEQIAAVIAFLLSDEAQAITGASIP  231 (239)
T ss_pred             HHHHHHHhhhcCeEEEEEecCcccCcchhhcCCc-------------hhhhcCCCHHHHHHHHHHHhCcccccccceEEE
Confidence            9999999988899999999999999864322110             112346789999999999998877789999999


Q ss_pred             eCCCcee
Q 024994          241 VDGGVTV  247 (259)
Q Consensus       241 ~dgG~~~  247 (259)
                      +|||+.+
T Consensus       232 ~~g~~~~  238 (239)
T PRK12828        232 VDGGVAL  238 (239)
T ss_pred             ecCCEeC
Confidence            9999865

>PRK06914 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.7e-36  Score=250.80  Aligned_cols=247  Identities=22%  Similarity=0.280  Sum_probs=206.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||+|+||++++++|+++|++|++++|+.+..+....++...  +.++.++.+|++|.+++++ ++++.+.+ ++
T Consensus         4 k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~-~~   81 (280)
T PRK06914          4 KIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEI-GR   81 (280)
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhc-CC
Confidence            67999999999999999999999999999999998887776665543  3478899999999999999 89988888 68


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      +|++|||||....++..+.+.+++++.+++|+.+++.+++.++|+|++.+.++||++||..+..+.+++..|+++|++++
T Consensus        82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~~~~  161 (280)
T PRK06914         82 IDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKYALE  161 (280)
T ss_pred             eeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCCchhHHhHHHHH
Confidence            99999999988777788889999999999999999999999999998877799999999999999999999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCC--------CCchHHHHhhhh--cCCCCCCCCHHHHHHHHHHHhC
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEG--------PEGSEFLDGIAR--QTPIGRAGEPDEVSSLVAFLCL  228 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~--------~~~~~~~~~~~~--~~~~~~~~~~~~va~~~~~l~~  228 (259)
                      +|+++++.++.++||+++.++||+++|++.......        ............  ..+..++.+++|++++++++++
T Consensus       162 ~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~  241 (280)
T PRK06914        162 GFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFGNPIDVANLIVEIAE  241 (280)
T ss_pred             HHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHc
Confidence            999999999999999999999999999976432110        000111122211  1345678899999999999997


Q ss_pred             CCCCCccccEEEeCCCceeeeccc
Q 024994          229 PAASYITGQIICVDGGVTVTVNVN  252 (259)
Q Consensus       229 ~~~~~~~G~~l~~dgG~~~~~~~~  252 (259)
                      ....   +..++++.+..+++.++
T Consensus       242 ~~~~---~~~~~~~~~~~~~~~~~  262 (280)
T PRK06914        242 SKRP---KLRYPIGKGVKLMILAK  262 (280)
T ss_pred             CCCC---CcccccCCchHHHHHHH
Confidence            6543   25688888877766554

>PLN02780 ketoreductase/ oxidoreductase

Probab=100.00  E-value=6.6e-36  Score=255.28  Aligned_cols=210  Identities=22%  Similarity=0.265  Sum_probs=174.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHcC-C
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTSIFQ-G   77 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~   77 (259)
                      |++||||||+|||+++|++|+++|++|++++|+.+++++..++++..  +.++..+.+|+++  ++.+.++++.+.++ .
T Consensus        54 ~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~~~~  131 (320)
T PLN02780         54 SWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETIEGL  131 (320)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHhcCC
Confidence            58999999999999999999999999999999999999888887653  3467888999985  23334444444442 2


Q ss_pred             CccEEEEcCCCCCC--CCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccC-C-CCCChhhhhh
Q 024994           78 KLNILINNAAIAFV--KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR-G-IPSVSLYGAY  153 (259)
Q Consensus        78 ~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~-~-~~~~~~Y~~s  153 (259)
                      ++|++|||||....  .++.+.+.+++++++++|+.+++.++++++|.|.+++.|+||++||..+.. + .|....|++|
T Consensus       132 didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p~~~~Y~aS  211 (320)
T PLN02780        132 DVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVYAAT  211 (320)
T ss_pred             CccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCccchHHHHH
Confidence            47799999998643  457788999999999999999999999999999888889999999998864 3 5788999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhC
Q 024994          154 KGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCL  228 (259)
Q Consensus       154 K~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  228 (259)
                      |+++++|+++++.|+.++||+|++|+||+++|++......               .. ...+|+++|+.++.-+.
T Consensus       212 Kaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~~~~---------------~~-~~~~p~~~A~~~~~~~~  270 (320)
T PLN02780        212 KAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIRRS---------------SF-LVPSSDGYARAALRWVG  270 (320)
T ss_pred             HHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcccccCC---------------CC-CCCCHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999998652100               00 13478999998887774

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.7e-35  Score=244.39  Aligned_cols=227  Identities=27%  Similarity=0.314  Sum_probs=198.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcC-CcEEEEEecCC--CHHHHHHHHHHHHHHcCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG-FKVTGSVCDLS--SREQREKLIETVTSIFQG   77 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~--~~~~~~~~~~~~~~~~~~   77 (259)
                      |++||||++++||.+++++|+++|++|++++|+.++.+....++.+.+ .++.++.+|++  +.++++++++.+.+.+ +
T Consensus        13 k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~-~   91 (247)
T PRK08945         13 RIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQF-G   91 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHHh-C
Confidence            689999999999999999999999999999999988887777776543 45777788886  7899999999999888 6


Q ss_pred             CccEEEEcCCCCCC-CCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHH
Q 024994           78 KLNILINNAAIAFV-KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGA  156 (259)
Q Consensus        78 ~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  156 (259)
                      ++|+||||||.... .++.+.+.++|++.+++|+.+++.++++++|+|.+.+.++|+++||..+..+.+.+..|++||++
T Consensus        92 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a  171 (247)
T PRK08945         92 RLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGAYAVSKFA  171 (247)
T ss_pred             CCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCCCcccHHHHHH
Confidence            89999999998643 46677889999999999999999999999999988888999999999999998999999999999


Q ss_pred             HHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccc
Q 024994          157 MNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG  236 (259)
Q Consensus       157 ~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G  236 (259)
                      +++++++++.++...+|+++.++||++.|++........             ...+..+|+|+++.++|++++.+.+++|
T Consensus       172 ~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~g  238 (247)
T PRK08945        172 TEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAFPGE-------------DPQKLKTPEDIMPLYLYLMGDDSRRKNG  238 (247)
T ss_pred             HHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhcCcc-------------cccCCCCHHHHHHHHHHHhCccccccCC
Confidence            999999999999999999999999999998754322111             1235678999999999999998899999


Q ss_pred             cEEEe
Q 024994          237 QIICV  241 (259)
Q Consensus       237 ~~l~~  241 (259)
                      +++..
T Consensus       239 ~~~~~  243 (247)
T PRK08945        239 QSFDA  243 (247)
T ss_pred             eEEeC
Confidence            98764

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=6.4e-38  Score=233.68  Aligned_cols=235  Identities=31%  Similarity=0.438  Sum_probs=209.5

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCccE
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNI   81 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~   81 (259)
                      ++|||||.||+|++.+..|+++|+.|++.+-.+++.++..+++   +.++.|.++|++++++++.++.....+| +++|.
T Consensus        11 valvtggasglg~ataerlakqgasv~lldlp~skg~~vakel---g~~~vf~padvtsekdv~aala~ak~kf-grld~   86 (260)
T KOG1199|consen   11 VALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL---GGKVVFTPADVTSEKDVRAALAKAKAKF-GRLDA   86 (260)
T ss_pred             eEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh---CCceEEeccccCcHHHHHHHHHHHHhhc-cceee
Confidence            5899999999999999999999999999999999988888777   6699999999999999999999999999 89999


Q ss_pred             EEEcCCCCCCC------CCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC------CCCEEEEecCCCccCCCCCChh
Q 024994           82 LINNAAIAFVK------PTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS------GNGSIVFISSVGGVRGIPSVSL  149 (259)
Q Consensus        82 vi~~ag~~~~~------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~~~~ii~isS~~~~~~~~~~~~  149 (259)
                      +|||||+...-      .-...+.|+|++++++|+.++|++++.-...|.++      +.|.||+..|..++.+-.+..+
T Consensus        87 ~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~gqaa  166 (260)
T KOG1199|consen   87 LVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTGQAA  166 (260)
T ss_pred             eeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccchhh
Confidence            99999975221      22235789999999999999999999988888654      2478999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCC-CCCCCHHHHHHHHHHHhC
Q 024994          150 YGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPI-GRAGEPDEVSSLVAFLCL  228 (259)
Q Consensus       150 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~~  228 (259)
                      |++||.++.+|+--++++++..|||++.|.||.++||+...+++.     ......+.+|+ .|.+.|.|-+..+..+. 
T Consensus       167 ysaskgaivgmtlpiardla~~gir~~tiapglf~tpllsslpek-----v~~fla~~ipfpsrlg~p~eyahlvqaii-  240 (260)
T KOG1199|consen  167 YSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSLPEK-----VKSFLAQLIPFPSRLGHPHEYAHLVQAII-  240 (260)
T ss_pred             hhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhhhHH-----HHHHHHHhCCCchhcCChHHHHHHHHHHH-
Confidence            999999999999999999999999999999999999999876542     55666777785 67889999999999888 


Q ss_pred             CCCCCccccEEEeCCCcee
Q 024994          229 PAASYITGQIICVDGGVTV  247 (259)
Q Consensus       229 ~~~~~~~G~~l~~dgG~~~  247 (259)
                       +..|++|+.|.+||-..|
T Consensus       241 -enp~lngevir~dgalrm  258 (260)
T KOG1199|consen  241 -ENPYLNGEVIRFDGALRM  258 (260)
T ss_pred             -hCcccCCeEEEecceecC
Confidence             678999999999998765

>PRK06194 hypothetical protein; Provisional

Probab=100.00  E-value=2.1e-35  Score=248.98  Aligned_cols=229  Identities=24%  Similarity=0.305  Sum_probs=191.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++++|++|.++++++++++.+.+ +++|
T Consensus         7 k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~-g~id   85 (287)
T PRK06194          7 KVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERF-GAVH   85 (287)
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc-CCCC
Confidence            689999999999999999999999999999999888888777776656678899999999999999999999988 7899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCC------CEEEEecCCCccCCCCCChhhhhhH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGN------GSIVFISSVGGVRGIPSVSLYGAYK  154 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~------~~ii~isS~~~~~~~~~~~~Y~~sK  154 (259)
                      +||||||....+++.+.+.++|++++++|+.+++.++++++|.|.+...      ++||++||..+..+.++...|+++|
T Consensus        86 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK  165 (287)
T PRK06194         86 LLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIYNVSK  165 (287)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCcchHHHH
Confidence            9999999987778888899999999999999999999999999987654      7999999999999989999999999


Q ss_pred             HHHHHHHHHHHHHHcc--CCceEEEEeCCceeCCCCCCCcCCCC----------chHHHHhhhhcCCCCCCCCHHHHHHH
Q 024994          155 GAMNQLTKNLACEWAK--DNIRTNTVAPWVIKTSMIKPFEEGPE----------GSEFLDGIARQTPIGRAGEPDEVSSL  222 (259)
Q Consensus       155 ~a~~~~~~~~a~e~~~--~gi~v~~v~pg~v~t~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~va~~  222 (259)
                      ++++.|+++++.++..  .+||++.++||+++|++.......+.          .....+............+++|+++.
T Consensus       166 ~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~dva~~  245 (287)
T PRK06194        166 HAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSERNRPADLANTAPPTRSQLIAQAMSQKAVGSGKVTAEEVAQL  245 (287)
T ss_pred             HHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccccccCchhcccCccccchhhHHHHHHHhhhhccCCCHHHHHHH
Confidence            9999999999999874  46999999999999998754321110          00011111111111123689999999


Q ss_pred             HHHHhCCC
Q 024994          223 VAFLCLPA  230 (259)
Q Consensus       223 ~~~l~~~~  230 (259)
                      +...+...
T Consensus       246 i~~~~~~~  253 (287)
T PRK06194        246 VFDAIRAG  253 (287)
T ss_pred             HHHHHHcC
Confidence            99877543

>PRK07775 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.5e-35  Score=245.54  Aligned_cols=227  Identities=20%  Similarity=0.298  Sum_probs=192.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+++||++++++|+++|++|++++|+.+.+++...++...+.++.++.+|+++.+++.++++++.+.+ +++|
T Consensus        11 ~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~id   89 (274)
T PRK07775         11 RPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEAL-GEIE   89 (274)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhc-CCCC
Confidence            689999999999999999999999999999999887777766666556678899999999999999999998888 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      ++|||||.....+..+.+.+++++++++|+.+++.+++.++|.|.+++.++||++||..+..+.++...|+++|++++++
T Consensus        90 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~l  169 (274)
T PRK07775         90 VLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPHMGAYGAAKAGLEAM  169 (274)
T ss_pred             EEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCcchHHHHHHHHHHH
Confidence            99999998777777788999999999999999999999999999877778999999999888888888999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhh--cCCCCCCCCHHHHHHHHHHHhCC
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIAR--QTPIGRAGEPDEVSSLVAFLCLP  229 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~va~~~~~l~~~  229 (259)
                      +++++.++.+.||++++++||+++|++........... .......  .....++.+++|++++++++++.
T Consensus       170 ~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~  239 (274)
T PRK07775        170 VTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGP-MLEDWAKWGQARHDYFLRASDLARAITFVAET  239 (274)
T ss_pred             HHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhH-HHHHHHHhcccccccccCHHHHHHHHHHHhcC
Confidence            99999999888999999999999998754322111111 1111111  12235688999999999999974

>PRK05866 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-35  Score=248.90  Aligned_cols=214  Identities=26%  Similarity=0.369  Sum_probs=185.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+||||++++++|+++|++|++++|+.+.+++..+++...+.++.++++|++|.++++++++++.+.+ +++|
T Consensus        41 k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~-g~id  119 (293)
T PRK05866         41 KRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRI-GGVD  119 (293)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence            689999999999999999999999999999999998888877776656678899999999999999999999988 6899


Q ss_pred             EEEEcCCCCCCCCCCCC--CHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccC-CCCCChhhhhhHHHH
Q 024994           81 ILINNAAIAFVKPTVDI--TAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR-GIPSVSLYGAYKGAM  157 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~-~~~~~~~Y~~sK~a~  157 (259)
                      ++|||||.....++.+.  +.+++++++++|+.+++.++++++|+|.+.+.++||++||.++.. +.+....|++||+++
T Consensus       120 ~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~p~~~~Y~asKaal  199 (293)
T PRK05866        120 ILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLFSVYNASKAAL  199 (293)
T ss_pred             EEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCCcchHHHHHHHH
Confidence            99999998766665542  468899999999999999999999999888789999999976654 357788999999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCC
Q 024994          158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLP  229 (259)
Q Consensus       158 ~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  229 (259)
                      ++|+++++.|+.++||++++++||+++|++........             . ....+|+++|+.+...+..
T Consensus       200 ~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~~~~-------------~-~~~~~pe~vA~~~~~~~~~  257 (293)
T PRK05866        200 SAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTKAYD-------------G-LPALTADEAAEWMVTAART  257 (293)
T ss_pred             HHHHHHHHHHhcccCcEEEEEEcCcccCcccccccccc-------------C-CCCCCHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999875321100             0 1235799999998888854

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=100.00  E-value=1.5e-35  Score=252.79  Aligned_cols=240  Identities=18%  Similarity=0.134  Sum_probs=190.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCC-CEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||++|||++++++|+++| ++|++++|+.++.++..+++...+.++.++.+|++|.++++++++++.+.+ +++
T Consensus         4 k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-~~i   82 (314)
T TIGR01289         4 PTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESG-RPL   82 (314)
T ss_pred             CEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhC-CCC
Confidence            689999999999999999999999 999999999988887777775445578889999999999999999998877 689


Q ss_pred             cEEEEcCCCCCC-CCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC--CCEEEEecCCCccCC-------------
Q 024994           80 NILINNAAIAFV-KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG--NGSIVFISSVGGVRG-------------  143 (259)
Q Consensus        80 d~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~ii~isS~~~~~~-------------  143 (259)
                      |++|||||+..+ .+..+.+.++|++++++|+.+++.+++.++|+|.+.+  .++||++||..+..+             
T Consensus        83 D~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~  162 (314)
T TIGR01289        83 DALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANLG  162 (314)
T ss_pred             CEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCccccc
Confidence            999999997543 2334678999999999999999999999999998763  489999999876421             


Q ss_pred             --------------------CCCChhhhhhHHHHHHHHHHHHHHHc-cCCceEEEEeCCce-eCCCCCCCcCCCCchHHH
Q 024994          144 --------------------IPSVSLYGAYKGAMNQLTKNLACEWA-KDNIRTNTVAPWVI-KTSMIKPFEEGPEGSEFL  201 (259)
Q Consensus       144 --------------------~~~~~~Y~~sK~a~~~~~~~~a~e~~-~~gi~v~~v~pg~v-~t~~~~~~~~~~~~~~~~  201 (259)
                                          ..++.+|++||+++..+++.+++++. +.||+|++|+||+| .|++.+.....  .. ..
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~--~~-~~  239 (314)
T TIGR01289       163 DLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPL--FR-TL  239 (314)
T ss_pred             ccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHH--HH-HH
Confidence                                12457899999999999999999985 46899999999999 69987542110  00 00


Q ss_pred             HhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCC
Q 024994          202 DGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVDGG  244 (259)
Q Consensus       202 ~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG  244 (259)
                      .........+...++++.++.+++++.+.....+|.++..++.
T Consensus       240 ~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~~  282 (314)
T TIGR01289       240 FPPFQKYITKGYVSEEEAGERLAQVVSDPKLKKSGVYWSWGNR  282 (314)
T ss_pred             HHHHHHHHhccccchhhhhhhhHHhhcCcccCCCceeeecCCc
Confidence            0111111123456899999999998876554457887766443

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK07904 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-35  Score=244.77  Aligned_cols=212  Identities=21%  Similarity=0.221  Sum_probs=180.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCC-CEEEEeeCChhH-HHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFG-AIVHTCSRNQIE-LDARLHEWKNKG-FKVTGSVCDLSSREQREKLIETVTSIFQG   77 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G-~~V~~~~r~~~~-~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (259)
                      |++|||||++|||+++|++|+++| ++|++++|+.++ +++..+++...+ .+++++++|++|.++++++++++.+ + +
T Consensus         9 ~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~-~-g   86 (253)
T PRK07904          9 QTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA-G-G   86 (253)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh-c-C
Confidence            689999999999999999999995 899999999886 777777776544 3789999999999999999998876 5 6


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHH
Q 024994           78 KLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAM  157 (259)
Q Consensus        78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~  157 (259)
                      ++|++|||+|..........+.++.++++++|+.+++.++++++|.|.+++.++||++||..+..+.++...|++||+++
T Consensus        87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~~~~Y~~sKaa~  166 (253)
T PRK07904         87 DVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRSNFVYGSTKAGL  166 (253)
T ss_pred             CCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCCCcchHHHHHHH
Confidence            89999999998643222222455667899999999999999999999988789999999998888888888999999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 024994          158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPA  230 (259)
Q Consensus       158 ~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  230 (259)
                      .+|+++++.|+.++||+++.++||+++|++.......                ....+++|+++.++..+.+.
T Consensus       167 ~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~~~~----------------~~~~~~~~~A~~i~~~~~~~  223 (253)
T PRK07904        167 DGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHAKEA----------------PLTVDKEDVAKLAVTAVAKG  223 (253)
T ss_pred             HHHHHHHHHHHhhcCCEEEEEeeCceecchhccCCCC----------------CCCCCHHHHHHHHHHHHHcC
Confidence            9999999999999999999999999999987543211                12357999999999988644

>PRK06179 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-35  Score=245.71  Aligned_cols=221  Identities=27%  Similarity=0.325  Sum_probs=189.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+++||||+||||++++++|+++|++|++++|+.+..+.        ..++.++++|++|.++++++++++.+.+ +++|
T Consensus         5 ~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~~~~~~~~-g~~d   75 (270)
T PRK06179          5 KVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP--------IPGVELLELDVTDDASVQAAVDEVIARA-GRID   75 (270)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc--------cCCCeeEEeecCCHHHHHHHHHHHHHhC-CCCC
Confidence            579999999999999999999999999999998765432        2367889999999999999999999998 7899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||....+++.+.+.+++++++++|+.+++.+++.++|+|.+++.++||++||..+..+.+....|+++|++++++
T Consensus        76 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  155 (270)
T PRK06179         76 VLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVEGY  155 (270)
T ss_pred             EEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCCccHHHHHHHHHHHH
Confidence            99999999877888888999999999999999999999999999988889999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCch----HHHHhh--hhcCCCCCCCCHHHHHHHHHHHhCCC
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGS----EFLDGI--ARQTPIGRAGEPDEVSSLVAFLCLPA  230 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~----~~~~~~--~~~~~~~~~~~~~~va~~~~~l~~~~  230 (259)
                      +++++.|+.+.||+++.++||+++|++...........    ......  ....+..+..+|+++++.++++++..
T Consensus       156 ~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~~  231 (270)
T PRK06179        156 SESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKADAPEVVADTVVKAALGP  231 (270)
T ss_pred             HHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhccccCCCHHHHHHHHHHHHcCC
Confidence            99999999999999999999999999876543221110    000001  11124556778999999999998754

>PRK08267 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.6e-35  Score=243.03  Aligned_cols=220  Identities=26%  Similarity=0.324  Sum_probs=189.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+.++++..++.  +.++.++++|++|.+++.++++++.+.+.+++|
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id   79 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG--AGNAWTGALDVTDRAAWDAALADFAAATGGRLD   79 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCC
Confidence            689999999999999999999999999999999988877766543  457899999999999999999998877337899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||.....++.+.+.+++++++++|+.+++.+++++.++|+..+.++||++||..+..+.+....|+.||++++++
T Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~  159 (260)
T PRK08267         80 VLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFAVRGL  159 (260)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCCchhhHHHHHHHHHH
Confidence            99999999877788888999999999999999999999999999887789999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCC
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLP  229 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  229 (259)
                      +++++.++.+.||++++++||++.|++....... .   .....   .......+++++++++..++..
T Consensus       160 ~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~-~---~~~~~---~~~~~~~~~~~va~~~~~~~~~  221 (260)
T PRK08267        160 TEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNE-V---DAGST---KRLGVRLTPEDVAEAVWAAVQH  221 (260)
T ss_pred             HHHHHHHhcccCcEEEEEecCCcCCcccccccch-h---hhhhH---hhccCCCCHHHHHHHHHHHHhC
Confidence            9999999999999999999999999987641110 0   11111   1123356789999999998853

>PRK06482 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-34  Score=242.51  Aligned_cols=239  Identities=19%  Similarity=0.284  Sum_probs=197.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+|+||++++++|+++|++|++++|+.+.++.+..+.   +.++.++++|++|.++++++++++.+.+ +++|
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id   78 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY---GDRLWVLQLDVTDSAAVRAVVDRAFAAL-GRID   78 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---cCceEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence            68999999999999999999999999999999987766554432   3478899999999999999999998888 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||....++..+.+.+++++.+++|+.+++.++++++|+|++.+.++||++||..+..+.++...|++||++++++
T Consensus        79 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~  158 (276)
T PRK06482         79 VVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEGF  158 (276)
T ss_pred             EEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCCCCchhHHHHHHHHHH
Confidence            99999999877788888899999999999999999999999999887778999999999888888999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCC--------CchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCC
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGP--------EGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAAS  232 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  232 (259)
                      +++++.++.+.||+++.++||.+.|++........        .......... .-+.....+++|++++++..+...  
T Consensus       159 ~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~a~~~~~~~~--  235 (276)
T PRK06482        159 VEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALA-DGSFAIPGDPQKMVQAMIASADQT--  235 (276)
T ss_pred             HHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHh-hccCCCCCCHHHHHHHHHHHHcCC--
Confidence            99999999889999999999999998864332110        0011122222 222333578999999998888533  


Q ss_pred             CccccEEEeCCCcee
Q 024994          233 YITGQIICVDGGVTV  247 (259)
Q Consensus       233 ~~~G~~l~~dgG~~~  247 (259)
                       ..+..+++.+|...
T Consensus       236 -~~~~~~~~g~~~~~  249 (276)
T PRK06482        236 -PAPRRLTLGSDAYA  249 (276)
T ss_pred             -CCCeEEecChHHHH
Confidence             23566888877544

>PRK07806 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-35  Score=243.64  Aligned_cols=234  Identities=26%  Similarity=0.275  Sum_probs=189.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChh-HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI-ELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||+||||++++++|+++|++|++++|+.+ ..+....++...+.++.++++|++|.++++++++++.+.+ +++
T Consensus         7 k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~   85 (248)
T PRK07806          7 KTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEF-GGL   85 (248)
T ss_pred             cEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhC-CCC
Confidence            68999999999999999999999999999999754 4555556665555678899999999999999999998888 689


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCcc-----CCCCCChhhhhhH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV-----RGIPSVSLYGAYK  154 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~-----~~~~~~~~Y~~sK  154 (259)
                      |++|||||.....   .   .+++..+++|+.+++.+++.+.|+|.+  .+++|++||..+.     .+.+.+..|++||
T Consensus        86 d~vi~~ag~~~~~---~---~~~~~~~~vn~~~~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~~~~~~Y~~sK  157 (248)
T PRK07806         86 DALVLNASGGMES---G---MDEDYAMRLNRDAQRNLARAALPLMPA--GSRVVFVTSHQAHFIPTVKTMPEYEPVARSK  157 (248)
T ss_pred             cEEEECCCCCCCC---C---CCcceeeEeeeHHHHHHHHHHHhhccC--CceEEEEeCchhhcCccccCCccccHHHHHH
Confidence            9999999864221   1   124567889999999999999999853  4799999996543     2334567899999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 024994          155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYI  234 (259)
Q Consensus       155 ~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~  234 (259)
                      ++++.++++++.++++.||++++|+||.+.|++...+..... +....  ....|.+++.+|+|+++++.++++  +.++
T Consensus       158 ~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~dva~~~~~l~~--~~~~  232 (248)
T PRK07806        158 RAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLN-PGAIE--ARREAAGKLYTVSEFAAEVARAVT--APVP  232 (248)
T ss_pred             HHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCC-HHHHH--HHHhhhcccCCHHHHHHHHHHHhh--cccc
Confidence            999999999999999999999999999999987654322111 11111  234577899999999999999996  4678


Q ss_pred             cccEEEeCCCceee
Q 024994          235 TGQIICVDGGVTVT  248 (259)
Q Consensus       235 ~G~~l~~dgG~~~~  248 (259)
                      +|++++++||....
T Consensus       233 ~g~~~~i~~~~~~~  246 (248)
T PRK07806        233 SGHIEYVGGADYFL  246 (248)
T ss_pred             CccEEEecCcccee
Confidence            99999999997653

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=100.00  E-value=5.9e-35  Score=227.37  Aligned_cols=243  Identities=26%  Similarity=0.337  Sum_probs=216.0

Q ss_pred             CEEEEEcCc--chHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGT--RGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s--~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++||+|-.  ..|++.||+.|.++|+++..+..++ +++...+++.+.-....+++||+++.++++++++++.+++ ++
T Consensus         7 K~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~~-g~   84 (259)
T COG0623           7 KRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKKW-GK   84 (259)
T ss_pred             ceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHhh-Cc
Confidence            789999864  6899999999999999999999888 5555555554433346678999999999999999999999 79


Q ss_pred             ccEEEEcCCCCC----CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhH
Q 024994           79 LNILINNAAIAF----VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYK  154 (259)
Q Consensus        79 id~vi~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  154 (259)
                      +|.|||+-++.+    .+.+.+.+.|.|...+++..++...+++++.|.|..  ++.+|.++=.++.+..|.+...+.+|
T Consensus        85 lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~--ggSiltLtYlgs~r~vPnYNvMGvAK  162 (259)
T COG0623          85 LDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNN--GGSILTLTYLGSERVVPNYNVMGVAK  162 (259)
T ss_pred             ccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCC--CCcEEEEEeccceeecCCCchhHHHH
Confidence            999999999875    356778899999999999999999999999999965  69999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 024994          155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYI  234 (259)
Q Consensus       155 ~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~  234 (259)
                      ++++.-+|.+|.+++++|||||.|+.|+|.|--.+....   .........+..|++|..++|||++..+||+|+-++.+
T Consensus       163 AaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~---f~~~l~~~e~~aPl~r~vt~eeVG~tA~fLlSdLssgi  239 (259)
T COG0623         163 AALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGD---FRKMLKENEANAPLRRNVTIEEVGNTAAFLLSDLSSGI  239 (259)
T ss_pred             HHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhcccc---HHHHHHHHHhhCCccCCCCHHHhhhhHHHHhcchhccc
Confidence            999999999999999999999999999999976655433   34477888899999999999999999999999999999


Q ss_pred             cccEEEeCCCceeeec
Q 024994          235 TGQIICVDGGVTVTVN  250 (259)
Q Consensus       235 ~G~~l~~dgG~~~~~~  250 (259)
                      ||+++.||+|++++.+
T Consensus       240 TGei~yVD~G~~i~~m  255 (259)
T COG0623         240 TGEIIYVDSGYHIMGM  255 (259)
T ss_pred             ccceEEEcCCceeecc
Confidence            9999999999998654

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.9e-34  Score=236.84  Aligned_cols=217  Identities=27%  Similarity=0.351  Sum_probs=192.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+++|||++++||++++++|+++|++|++++|+.++.++...++...+.++.++.+|+++.+++.++++++.+.+ +++|
T Consensus         8 ~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id   86 (239)
T PRK07666          8 KNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNEL-GSID   86 (239)
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHc-CCcc
Confidence            589999999999999999999999999999999988887777776656688999999999999999999999888 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      ++|||+|....+++.+.+.+++++.+++|+.+++.+++.+.|.|.+++.+++|++||..+..+.++...|+.+|++++++
T Consensus        87 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~  166 (239)
T PRK07666         87 ILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASKFGVLGL  166 (239)
T ss_pred             EEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCCCcchHHHHHHHHHH
Confidence            99999998776777788999999999999999999999999999888789999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPA  230 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  230 (259)
                      +++++.++.+.||+++.|+||++.|++........           . ......+++|+++.+..+++..
T Consensus       167 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~-----------~-~~~~~~~~~~~a~~~~~~l~~~  224 (239)
T PRK07666        167 TESLMQEVRKHNIRVTALTPSTVATDMAVDLGLTD-----------G-NPDKVMQPEDLAEFIVAQLKLN  224 (239)
T ss_pred             HHHHHHHhhccCcEEEEEecCcccCcchhhccccc-----------c-CCCCCCCHHHHHHHHHHHHhCC
Confidence            99999999999999999999999999764321110           0 1234568999999999998643

>PRK09072 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-34  Score=240.65  Aligned_cols=217  Identities=26%  Similarity=0.323  Sum_probs=189.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||.+++++|+++|++|++++|+.+.++....++ ..+.++.++++|++|.++++++++.+.+ + +++|
T Consensus         6 ~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~-~-~~id   82 (263)
T PRK09072          6 KRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-PYPGRHRWVVADLTSEAGREAVLARARE-M-GGIN   82 (263)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-hcCCceEEEEccCCCHHHHHHHHHHHHh-c-CCCC
Confidence            68999999999999999999999999999999998888777766 3355789999999999999999998876 6 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      ++|||||.....++.+.+.+++++++++|+.+++.+++.++|+|.+.+.++++++||..+..+.++...|+++|+++.++
T Consensus        83 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  162 (263)
T PRK09072         83 VLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASKFALRGF  162 (263)
T ss_pred             EEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCCccHHHHHHHHHHHH
Confidence            99999998777778888999999999999999999999999999887779999999999999989999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPA  230 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  230 (259)
                      +++++.++.+.||+|+.++||+++|++.......         . ......+..+|+|+++.+++++...
T Consensus       163 ~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~---------~-~~~~~~~~~~~~~va~~i~~~~~~~  222 (263)
T PRK09072        163 SEALRRELADTGVRVLYLAPRATRTAMNSEAVQA---------L-NRALGNAMDDPEDVAAAVLQAIEKE  222 (263)
T ss_pred             HHHHHHHhcccCcEEEEEecCcccccchhhhccc---------c-cccccCCCCCHHHHHHHHHHHHhCC
Confidence            9999999999999999999999999875432110         0 0011235678999999999999754

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=100.00  E-value=3.8e-34  Score=236.70  Aligned_cols=238  Identities=42%  Similarity=0.562  Sum_probs=198.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhH--HHHHHHHHHhcC-CcEEEEEecCCC-HHHHHHHHHHHHHHcC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE--LDARLHEWKNKG-FKVTGSVCDLSS-REQREKLIETVTSIFQ   76 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~-~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   76 (259)
                      |++|||||++|||+++|+.|+++|++|+++.|+.+.  .+...+.....+ ..+.+..+|+++ .++++.+++.+.+.+ 
T Consensus         6 ~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~~~-   84 (251)
T COG1028           6 KVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEEEF-   84 (251)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHHHc-
Confidence            689999999999999999999999999888887664  333333333112 368888899998 999999999999998 


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCC-ChhhhhhH
Q 024994           77 GKLNILINNAAIAFV-KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPS-VSLYGAYK  154 (259)
Q Consensus        77 ~~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~-~~~Y~~sK  154 (259)
                      +++|++|||||.... .++.+.+.++|++++++|+.+++.+++.+.|.+.++   +||++||..+. +.++ +.+|++||
T Consensus        85 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~---~Iv~isS~~~~-~~~~~~~~Y~~sK  160 (251)
T COG1028          85 GRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ---RIVNISSVAGL-GGPPGQAAYAASK  160 (251)
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC---eEEEECCchhc-CCCCCcchHHHHH
Confidence            789999999999877 488899999999999999999999999888888733   99999999998 7777 49999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCC-CCC
Q 024994          155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPA-ASY  233 (259)
Q Consensus       155 ~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~-~~~  233 (259)
                      +|+.+|+++++.|+.+.||+++.|+||++.|++........ .. .........+..+...|++++..+.|+.+.. ..+
T Consensus       161 ~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (251)
T COG1028         161 AALIGLTKALALELAPRGIRVNAVAPGYIDTPMTAALESAE-LE-ALKRLAARIPLGRLGTPEEVAAAVAFLASDEAASY  238 (251)
T ss_pred             HHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcchhhhhhhh-hh-HHHHHHhcCCCCCCcCHHHHHHHHHHHcCcchhcc
Confidence            99999999999999999999999999999999987544332 00 0122222226668889999999999888664 678


Q ss_pred             ccccEEEeCCCc
Q 024994          234 ITGQIICVDGGV  245 (259)
Q Consensus       234 ~~G~~l~~dgG~  245 (259)
                      ++|+.+.+|||.
T Consensus       239 ~~g~~~~~~~~~  250 (251)
T COG1028         239 ITGQTLPVDGGL  250 (251)
T ss_pred             ccCCEEEeCCCC
Confidence            999999999885

>PRK05854 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-34  Score=246.08  Aligned_cols=238  Identities=23%  Similarity=0.232  Sum_probs=186.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||++|||++++++|+++|++|++++|+.++.++..+++...  +.++.++++|++|.++++++++++.+.+ ++
T Consensus        15 k~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~-~~   93 (313)
T PRK05854         15 KRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEG-RP   93 (313)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhC-CC
Confidence            78999999999999999999999999999999999888887777543  3468899999999999999999999888 68


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCC------------CCC
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG------------IPS  146 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~------------~~~  146 (259)
                      +|+||||||.... +..+.+.++++.++++|+.+++.+++.++|.|.+. .++||++||..+..+            .++
T Consensus        94 iD~li~nAG~~~~-~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS~~~~~~~~~~~~~~~~~~~~~  171 (313)
T PRK05854         94 IHLLINNAGVMTP-PERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSSIAARRGAINWDDLNWERSYAG  171 (313)
T ss_pred             ccEEEECCccccC-CccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEechhhcCCCcCcccccccccCcc
Confidence            9999999998653 33456789999999999999999999999999765 689999999876543            245


Q ss_pred             ChhhhhhHHHHHHHHHHHHHHH--ccCCceEEEEeCCceeCCCCCCCcCC-CCchHHHHhhhh-cCCCC-CCCCHHHHHH
Q 024994          147 VSLYGAYKGAMNQLTKNLACEW--AKDNIRTNTVAPWVIKTSMIKPFEEG-PEGSEFLDGIAR-QTPIG-RAGEPDEVSS  221 (259)
Q Consensus       147 ~~~Y~~sK~a~~~~~~~~a~e~--~~~gi~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~~~~~-~~~~~-~~~~~~~va~  221 (259)
                      +..|+.||+++.+|++.++.++  ...||+||+++||++.|++....... .........+.. ....+ ...++++.+.
T Consensus       172 ~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ga~  251 (313)
T PRK05854        172 MRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAARPEVGRDKDTLMVRLIRSLSARGFLVGTVESAIL  251 (313)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCccccccccccchhHHHHHHHHHHhhcccccCCHHHHHH
Confidence            6789999999999999999864  45689999999999999987542210 010111111111 11111 2347888888


Q ss_pred             HHHHHhCCCCCCccccEEEeC
Q 024994          222 LVAFLCLPAASYITGQIICVD  242 (259)
Q Consensus       222 ~~~~l~~~~~~~~~G~~l~~d  242 (259)
                      ..++++.+.. ..+|.++.-+
T Consensus       252 ~~l~~a~~~~-~~~g~~~~~~  271 (313)
T PRK05854        252 PALYAATSPD-AEGGAFYGPR  271 (313)
T ss_pred             HhhheeeCCC-CCCCcEECCC
Confidence            8888776432 2357766543

>PRK06197 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-34  Score=247.12  Aligned_cols=235  Identities=24%  Similarity=0.209  Sum_probs=186.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||++|||++++++|+++|++|++++|+.++.++..+++...  +.++.++++|++|.++++++++++.+.+ ++
T Consensus        17 k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~-~~   95 (306)
T PRK06197         17 RVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAY-PR   95 (306)
T ss_pred             CEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhC-CC
Confidence            68999999999999999999999999999999998887776666532  3568899999999999999999999988 68


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccC-------------CCC
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR-------------GIP  145 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~-------------~~~  145 (259)
                      +|+||||||.....  .+.+.++++.++++|+.+++.+++.++|.|.+.+.++||++||..+..             +.+
T Consensus        96 iD~li~nAg~~~~~--~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~  173 (306)
T PRK06197         96 IDLLINNAGVMYTP--KQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQWERRYN  173 (306)
T ss_pred             CCEEEECCccccCC--CccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccCcccCCC
Confidence            99999999976432  346678899999999999999999999999887778999999976543             234


Q ss_pred             CChhhhhhHHHHHHHHHHHHHHHccCCceEEEE--eCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHH
Q 024994          146 SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV--APWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLV  223 (259)
Q Consensus       146 ~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v--~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  223 (259)
                      +...|+.||+++++|+++++.++++.|++++++  +||+++|++.+..+..     ....+....+. ...++++-+...
T Consensus       174 ~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~~~~-----~~~~~~~~~~~-~~~~~~~g~~~~  247 (306)
T PRK06197        174 RVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNLPRA-----LRPVATVLAPL-LAQSPEMGALPT  247 (306)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccCcHH-----HHHHHHHHHhh-hcCCHHHHHHHH
Confidence            567899999999999999999998888877665  7999999987654221     11111111111 124567666666


Q ss_pred             HHHhCCCCCCccccEEEeCCCc
Q 024994          224 AFLCLPAASYITGQIICVDGGV  245 (259)
Q Consensus       224 ~~l~~~~~~~~~G~~l~~dgG~  245 (259)
                      ++++. .....+|..+..||+.
T Consensus       248 ~~~~~-~~~~~~g~~~~~~~~~  268 (306)
T PRK06197        248 LRAAT-DPAVRGGQYYGPDGFG  268 (306)
T ss_pred             HHHhc-CCCcCCCeEEccCccc
Confidence            66665 3456789988887764

>PRK08251 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.4e-34  Score=235.92  Aligned_cols=213  Identities=24%  Similarity=0.318  Sum_probs=188.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++...++...  +.++.++++|+++.++++++++++.+.+ ++
T Consensus         3 k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~   81 (248)
T PRK08251          3 QKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDEL-GG   81 (248)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHc-CC
Confidence            68999999999999999999999999999999998888776666543  5578999999999999999999999988 78


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCC-ChhhhhhHHHH
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPS-VSLYGAYKGAM  157 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~-~~~Y~~sK~a~  157 (259)
                      +|++|||||+....+..+.+.+.+++++++|+.+++.++++++|+|.+.+.++||++||..+..+.+. ...|+.||+++
T Consensus        82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~  161 (248)
T PRK08251         82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYAASKAGV  161 (248)
T ss_pred             CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCCCcccHHHHHHHH
Confidence            99999999998777777788999999999999999999999999998877899999999998888775 68999999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 024994          158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPA  230 (259)
Q Consensus       158 ~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  230 (259)
                      ++++++++.++...+|+++.|+||+++|++......                .....++++.++.++..+...
T Consensus       162 ~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~----------------~~~~~~~~~~a~~i~~~~~~~  218 (248)
T PRK08251        162 ASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAKS----------------TPFMVDTETGVKALVKAIEKE  218 (248)
T ss_pred             HHHHHHHHHHhcccCcEEEEEecCcCcchhhhcccc----------------CCccCCHHHHHHHHHHHHhcC
Confidence            999999999998889999999999999998754321                113457899999998877643

>PRK07578 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-34  Score=231.88  Aligned_cols=198  Identities=24%  Similarity=0.269  Sum_probs=172.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++ ++|++++|+..                 .+++|++|.+++++++++.     +++|
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-----------------~~~~D~~~~~~~~~~~~~~-----~~id   57 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-----------------DVQVDITDPASIRALFEKV-----GKVD   57 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-----------------ceEecCCChHHHHHHHHhc-----CCCC
Confidence            68999999999999999999999 99999999753                 3579999999999888753     6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      ++|||||.....++.+.+.++|++.+++|+.+++.+++.+.|+|.+  .++|+++||..+..+.+++..|+++|+++++|
T Consensus        58 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~  135 (199)
T PRK07578         58 AVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND--GGSFTLTSGILSDEPIPGGASAATVNGALEGF  135 (199)
T ss_pred             EEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCeEEEEcccccCCCCCCchHHHHHHHHHHHH
Confidence            9999999877777888899999999999999999999999999965  48999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC  240 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~  240 (259)
                      +++++.|+ ++||++|.|+||+++|++....              ...+..+..+++|+++.+.++++   ...+|+++.
T Consensus       136 ~~~la~e~-~~gi~v~~i~Pg~v~t~~~~~~--------------~~~~~~~~~~~~~~a~~~~~~~~---~~~~g~~~~  197 (199)
T PRK07578        136 VKAAALEL-PRGIRINVVSPTVLTESLEKYG--------------PFFPGFEPVPAARVALAYVRSVE---GAQTGEVYK  197 (199)
T ss_pred             HHHHHHHc-cCCeEEEEEcCCcccCchhhhh--------------hcCCCCCCCCHHHHHHHHHHHhc---cceeeEEec
Confidence            99999999 8899999999999998864211              01123345689999999988886   358999887


Q ss_pred             e
Q 024994          241 V  241 (259)
Q Consensus       241 ~  241 (259)
                      +
T Consensus       198 ~  198 (199)
T PRK07578        198 V  198 (199)
T ss_pred             c
Confidence            5

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=4.2e-35  Score=224.40  Aligned_cols=180  Identities=28%  Similarity=0.390  Sum_probs=166.3

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCccE
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNI   81 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~   81 (259)
                      |+|||||++|||+++|++|.+.|-+|++++|+++.+++..++.    ..++...||+.|.++.+++++++.+.+ ..+++
T Consensus         7 TiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~----p~~~t~v~Dv~d~~~~~~lvewLkk~~-P~lNv   81 (245)
T COG3967           7 TILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN----PEIHTEVCDVADRDSRRELVEWLKKEY-PNLNV   81 (245)
T ss_pred             EEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcC----cchheeeecccchhhHHHHHHHHHhhC-Cchhe
Confidence            7999999999999999999999999999999999998877653    468888999999999999999999999 68999


Q ss_pred             EEEcCCCCCCCCCC--CCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           82 LINNAAIAFVKPTV--DITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        82 vi~~ag~~~~~~~~--~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      ||||||+...-.+.  +...++.++.+++|+.+|+++++.++|++.++..+.||++||..++.|....+.|+++|+|++.
T Consensus        82 liNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~PvYcaTKAaiHs  161 (245)
T COG3967          82 LINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCATKAAIHS  161 (245)
T ss_pred             eeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccccccchhhHHHHHH
Confidence            99999997554333  3457778899999999999999999999999989999999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCC
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTS  186 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~  186 (259)
                      ++.+|+..+...+|+|..+.|..|+|+
T Consensus       162 yt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         162 YTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             HHHHHHHHhhhcceEEEEecCCceecC
Confidence            999999999888999999999999996

>PRK07102 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.8e-34  Score=235.70  Aligned_cols=211  Identities=23%  Similarity=0.277  Sum_probs=185.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |+++||||++|||.+++++|+++|++|++++|+.++.+...+++... +.++.++++|++|.++++++++++.+    ++
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~----~~   77 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPA----LP   77 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhh----cC
Confidence            68999999999999999999999999999999998887766665443 45789999999999999999887743    57


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      |++|||+|.....+..+.+.+++++++++|+.+++.+++++.|+|.+.+.++++++||..+..+.+....|+++|+++++
T Consensus        78 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  157 (243)
T PRK07102         78 DIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRASNYVYGSAKAALTA  157 (243)
T ss_pred             CEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCCCcccHHHHHHHHH
Confidence            99999999876667778889999999999999999999999999988778999999999998888889999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPA  230 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  230 (259)
                      ++++++.++.+.||++++|+||+++|++.....               .+.....+|+++++.++..++..
T Consensus       158 ~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~~---------------~~~~~~~~~~~~a~~i~~~~~~~  213 (243)
T PRK07102        158 FLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGLK---------------LPGPLTAQPEEVAKDIFRAIEKG  213 (243)
T ss_pred             HHHHHHHHhhccCcEEEEEecCcccChhhhccC---------------CCccccCCHHHHHHHHHHHHhCC
Confidence            999999999999999999999999999754321               12234568999999999988754

>PRK05693 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.4e-34  Score=237.77  Aligned_cols=221  Identities=24%  Similarity=0.274  Sum_probs=183.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+||||++++++|+++|++|++++|+.+..+....      ..+.++.+|+++.++++++++++.+.+ +++|
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~------~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~id   74 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAA------AGFTAVQLDVNDGAALARLAEELEAEH-GGLD   74 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH------CCCeEEEeeCCCHHHHHHHHHHHHHhc-CCCC
Confidence            789999999999999999999999999999999877654321      146788999999999999999998888 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||....+++.+.+.+++++.+++|+.+++.++++++|.|.+. .++||++||..+..+.+....|+++|++++.|
T Consensus        75 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~  153 (274)
T PRK05693         75 VLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS-RGLVVNIGSVSGVLVTPFAGAYCASKAAVHAL  153 (274)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCEEEEECCccccCCCCCccHHHHHHHHHHHH
Confidence            99999998777788888999999999999999999999999999754 58999999999999989999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCC--------CchHHHHhhhh--cCCCCCCCCHHHHHHHHHHHhCC
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGP--------EGSEFLDGIAR--QTPIGRAGEPDEVSSLVAFLCLP  229 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~--------~~~~~~~~~~~--~~~~~~~~~~~~va~~~~~l~~~  229 (259)
                      +++++.|+.+.||+|+.++||+++|++........        ......+.+..  ........+|+++++.+...+..
T Consensus       154 ~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~~~  232 (274)
T PRK05693        154 SDALRLELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARARASQDNPTPAAEFARQLLAAVQQ  232 (274)
T ss_pred             HHHHHHHhhhhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHhC
Confidence            99999999999999999999999999876432110        00001111111  11123345899999999887753

>PRK06181 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.1e-34  Score=236.71  Aligned_cols=221  Identities=28%  Similarity=0.386  Sum_probs=191.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+|+||.+++++|+++|++|++++|+.++.+...+++...+.++.++.+|++|.++++++++++.+.+ +++|
T Consensus         2 ~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~id   80 (263)
T PRK06181          2 KVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARF-GGID   80 (263)
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence            689999999999999999999999999999999888877777776666678899999999999999999999888 6899


Q ss_pred             EEEEcCCCCCCCCCCCC-CHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDI-TAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      +||||+|.....++.+. +.+++++.+++|+.+++.+++.++|+|.+. .+++|++||..+..+.++...|+++|+++++
T Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~  159 (263)
T PRK06181         81 ILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS-RGQIVVVSSLAGLTGVPTRSGYAASKHALHG  159 (263)
T ss_pred             EEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCEEEEEecccccCCCCCccHHHHHHHHHHH
Confidence            99999998777777777 899999999999999999999999998765 5899999999999898899999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCC--CCCCCCHHHHHHHHHHHhCC
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTP--IGRAGEPDEVSSLVAFLCLP  229 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~va~~~~~l~~~  229 (259)
                      ++++++.++.+.++++++++||++.|++...........      ....+  ..++.+|+|+++++.++++.
T Consensus       160 ~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~------~~~~~~~~~~~~~~~dva~~i~~~~~~  225 (263)
T PRK06181        160 FFDSLRIELADDGVAVTVVCPGFVATDIRKRALDGDGKP------LGKSPMQESKIMSAEECAEAILPAIAR  225 (263)
T ss_pred             HHHHHHHHhhhcCceEEEEecCccccCcchhhccccccc------cccccccccCCCCHHHHHHHHHHHhhC
Confidence            999999999999999999999999999876432111100      01111  23678999999999999974

>PRK07023 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-34  Score=235.88  Aligned_cols=224  Identities=22%  Similarity=0.283  Sum_probs=184.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH-HHHHcC--C
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIET-VTSIFQ--G   77 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-~~~~~~--~   77 (259)
                      |++|||||+||||++++++|+++|++|++++|+.++..     ....+.++.++++|++|.+++++++++ +.+.++  +
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~-----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~   76 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSL-----AAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGA   76 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhh-----hhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCC
Confidence            57999999999999999999999999999999865421     122345788999999999999998877 555442  3


Q ss_pred             CccEEEEcCCCCCC-CCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHH
Q 024994           78 KLNILINNAAIAFV-KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGA  156 (259)
Q Consensus        78 ~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  156 (259)
                      ++|++|||+|.... .++.+.+.+++++.+++|+.+++.+++.+.+.|.+.+.++||++||..+..+.+++..|+++|++
T Consensus        77 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  156 (243)
T PRK07023         77 SRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGWSVYCATKAA  156 (243)
T ss_pred             CceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCCchHHHHHHHH
Confidence            79999999998654 56777899999999999999999999999999987777999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCC-CchHHHHhhhhcCCCCCCCCHHHHHH-HHHHHhCCC
Q 024994          157 MNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGP-EGSEFLDGIARQTPIGRAGEPDEVSS-LVAFLCLPA  230 (259)
Q Consensus       157 ~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~va~-~~~~l~~~~  230 (259)
                      +++++++++.+ .+.||+++.|+||+++|++........ ........+....+.++..+|+|+++ .+.++.++.
T Consensus       157 ~~~~~~~~~~~-~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~l~~~~  231 (243)
T PRK07023        157 LDHHARAVALD-ANRALRIVSLAPGVVDTGMQATIRATDEERFPMRERFRELKASGALSTPEDAARRLIAYLLSDD  231 (243)
T ss_pred             HHHHHHHHHhc-CCCCcEEEEecCCccccHHHHHHHhcccccchHHHHHHHhhhcCCCCCHHHHHHHHHHHHhccc
Confidence            99999999999 778999999999999999864321111 10112333455667889999999999 566776654

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=100.00  E-value=1.3e-33  Score=242.02  Aligned_cols=236  Identities=17%  Similarity=0.109  Sum_probs=184.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||.+++++|+++|++|++++|+.++.++..+++...+.++.++++|++|.++++++++++.+.. +++|
T Consensus         7 k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-~~iD   85 (322)
T PRK07453          7 GTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALG-KPLD   85 (322)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhC-CCcc
Confidence            689999999999999999999999999999999998888777775445578899999999999999999977665 6899


Q ss_pred             EEEEcCCCCCCC-CCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCC--CEEEEecCCCccC---------------
Q 024994           81 ILINNAAIAFVK-PTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGN--GSIVFISSVGGVR---------------  142 (259)
Q Consensus        81 ~vi~~ag~~~~~-~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~ii~isS~~~~~---------------  142 (259)
                      +||||||+.... +..+.+.++++.++++|+.+++.+++.++|.|.+.+.  ++||++||.....               
T Consensus        86 ~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~~~~  165 (322)
T PRK07453         86 ALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPADL  165 (322)
T ss_pred             EEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCccch
Confidence            999999976432 3346689999999999999999999999999987653  6999999965422               


Q ss_pred             --------------------CCCCChhhhhhHHHHHHHHHHHHHHHc-cCCceEEEEeCCce-eCCCCCCCcCCCCchHH
Q 024994          143 --------------------GIPSVSLYGAYKGAMNQLTKNLACEWA-KDNIRTNTVAPWVI-KTSMIKPFEEGPEGSEF  200 (259)
Q Consensus       143 --------------------~~~~~~~Y~~sK~a~~~~~~~~a~e~~-~~gi~v~~v~pg~v-~t~~~~~~~~~~~~~~~  200 (259)
                                          +..+..+|+.||.+...+++.+++++. ..||++++++||+| .|++.+.....  .. .
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~--~~-~  242 (322)
T PRK07453        166 GDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPLFRNTPPL--FQ-K  242 (322)
T ss_pred             hhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCcccccCCHH--HH-H
Confidence                                112346899999999999999999984 46899999999999 58876543210  00 1


Q ss_pred             HHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 024994          201 LDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC  240 (259)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~  240 (259)
                      ..............++++.++.+++++.+.....+|.++.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~  282 (322)
T PRK07453        243 LFPWFQKNITGGYVSQELAGERVAQVVADPEFAQSGVHWS  282 (322)
T ss_pred             HHHHHHHHHhhceecHHHHhhHHHHhhcCcccCCCCceee
Confidence            1111111112234567777877887776554456888776

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4.5e-33  Score=228.44  Aligned_cols=230  Identities=20%  Similarity=0.262  Sum_probs=193.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+++||||+++||.++++.|+++|++|++++|+.+..+...+++... .+++++++|+++.++++++++++.+.+ +++|
T Consensus         6 ~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~id   83 (238)
T PRK05786          6 KKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKY-GNIHYVVGDVSSTESARNVIEKAAKVL-NAID   83 (238)
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEECCCCCHHHHHHHHHHHHHHh-CCCC
Confidence            58999999999999999999999999999999998877665555443 368899999999999999999998888 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccC-CCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR-GIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~-~~~~~~~Y~~sK~a~~~  159 (259)
                      .+|+++|.....+..  +.+++++++++|+.+++.+.+.++|.+.+  .+++|++||..+.. +.+....|+++|++++.
T Consensus        84 ~ii~~ag~~~~~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~~~~~~~~Y~~sK~~~~~  159 (238)
T PRK05786         84 GLVVTVGGYVEDTVE--EFSGLEEMLTNHIKIPLYAVNASLRFLKE--GSSIVLVSSMSGIYKASPDQLSYAVAKAGLAK  159 (238)
T ss_pred             EEEEcCCCcCCCchH--HHHHHHHHHHHhchHHHHHHHHHHHHHhc--CCEEEEEecchhcccCCCCchHHHHHHHHHHH
Confidence            999999975443333  34889999999999999999999999864  48999999987743 56778899999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCC-CCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTP-IGRAGEPDEVSSLVAFLCLPAASYITGQI  238 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~va~~~~~l~~~~~~~~~G~~  238 (259)
                      ++++++.++.+.||+++.++||+++|++....        ...   ...+ .....+++|+++.+.+++++...+.+|+.
T Consensus       160 ~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~--------~~~---~~~~~~~~~~~~~~va~~~~~~~~~~~~~~~g~~  228 (238)
T PRK05786        160 AVEILASELLGRGIRVNGIAPTTISGDFEPER--------NWK---KLRKLGDDMAPPEDFAKVIIWLLTDEADWVDGVV  228 (238)
T ss_pred             HHHHHHHHHhhcCeEEEEEecCccCCCCCchh--------hhh---hhccccCCCCCHHHHHHHHHHHhcccccCccCCE
Confidence            99999999998999999999999999864210        011   1111 12356899999999999998888999999


Q ss_pred             EEeCCCcee
Q 024994          239 ICVDGGVTV  247 (259)
Q Consensus       239 l~~dgG~~~  247 (259)
                      +.+|||..+
T Consensus       229 ~~~~~~~~~  237 (238)
T PRK05786        229 IPVDGGARL  237 (238)
T ss_pred             EEECCcccc
Confidence            999999765

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=100.00  E-value=3e-33  Score=217.55  Aligned_cols=224  Identities=26%  Similarity=0.285  Sum_probs=181.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHC-CCEE-EEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC-C
Q 024994            1 MTALVTGGTRGIGHATVEELARF-GAIV-HTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ-G   77 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~-G~~V-~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~   77 (259)
                      |.++||||.+|||..++++|.+. |..+ +.+.|+.++.....+.......+++.++.|+++.++++.+++++.+..+ .
T Consensus         4 ksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~   83 (249)
T KOG1611|consen    4 KSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGSD   83 (249)
T ss_pred             ccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcccC
Confidence            57999999999999999999976 5554 4556667775333333333466899999999999999999999999853 4


Q ss_pred             CccEEEEcCCCCC-CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCC-----------CEEEEecCCCccCCC-
Q 024994           78 KLNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGN-----------GSIVFISSVGGVRGI-  144 (259)
Q Consensus        78 ~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-----------~~ii~isS~~~~~~~-  144 (259)
                      .+|++|||||+.. .....+.+.+.|.+.+++|..+++.++|+++|++.+...           ..|||+||.++-.+. 
T Consensus        84 GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~~~  163 (249)
T KOG1611|consen   84 GLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIGGF  163 (249)
T ss_pred             CceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccCCC
Confidence            6999999999864 345556678899999999999999999999999987543           389999997765432 


Q ss_pred             --CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHH
Q 024994          145 --PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSL  222 (259)
Q Consensus       145 --~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~  222 (259)
                        .++.+|..||+|+++|+|+++.|+++.+|-|..+|||||.|+|....                    -..++||.+..
T Consensus       164 ~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~~--------------------a~ltveeSts~  223 (249)
T KOG1611|consen  164 RPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGKK--------------------AALTVEESTSK  223 (249)
T ss_pred             CCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCCC--------------------cccchhhhHHH
Confidence              45789999999999999999999999999999999999999998622                    12256777776


Q ss_pred             HHHHhCCCCCCccccEEEeCCC
Q 024994          223 VAFLCLPAASYITGQIICVDGG  244 (259)
Q Consensus       223 ~~~l~~~~~~~~~G~~l~~dgG  244 (259)
                      ++..........+|.+++-|+-
T Consensus       224 l~~~i~kL~~~hnG~ffn~dlt  245 (249)
T KOG1611|consen  224 LLASINKLKNEHNGGFFNRDGT  245 (249)
T ss_pred             HHHHHHhcCcccCcceEccCCC
Confidence            6666665666779999998874

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.1e-34  Score=223.23  Aligned_cols=184  Identities=24%  Similarity=0.292  Sum_probs=168.4

Q ss_pred             CEEEEEcC-cchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGG-TRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~-s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |.+||||+ +||||.+++++|+++|+.|+.++|..+...++..+.     .+.....|+++++++..+..++++.-.|++
T Consensus         8 k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~-----gl~~~kLDV~~~~~V~~v~~evr~~~~Gkl   82 (289)
T KOG1209|consen    8 KKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQF-----GLKPYKLDVSKPEEVVTVSGEVRANPDGKL   82 (289)
T ss_pred             CeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhh-----CCeeEEeccCChHHHHHHHHHHhhCCCCce
Confidence            67889876 578999999999999999999999999888776443     578889999999999999999999533899


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      |+++||||.....|..+.+.++.++.|++|++|.+++++++...+.+ .+|.|||++|..+..|+|..+.|++||+|++.
T Consensus        83 d~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~lik-aKGtIVnvgSl~~~vpfpf~~iYsAsKAAiha  161 (289)
T KOG1209|consen   83 DLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIK-AKGTIVNVGSLAGVVPFPFGSIYSASKAAIHA  161 (289)
T ss_pred             EEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHH-ccceEEEecceeEEeccchhhhhhHHHHHHHH
Confidence            99999999998899999999999999999999999999999855544 47999999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCC
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKP  190 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~  190 (259)
                      +++.|+.|++|.||+|..+.||.|.|+...+
T Consensus       162 y~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k  192 (289)
T KOG1209|consen  162 YARTLRLELKPFGVRVINAITGGVATDIADK  192 (289)
T ss_pred             hhhhcEEeeeccccEEEEecccceecccccC
Confidence            9999999999999999999999999998764

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=100.00  E-value=1.4e-33  Score=230.18  Aligned_cols=186  Identities=23%  Similarity=0.295  Sum_probs=173.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC-CCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ-GKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~~i   79 (259)
                      |.|+|||+-+|+|+.+|++|.++|++|++...+++..+.+..+..  .++...++.|++++++++++.+.+.+..+ ..+
T Consensus        30 k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~--s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~gL  107 (322)
T KOG1610|consen   30 KAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK--SPRLRTLQLDVTKPESVKEAAQWVKKHLGEDGL  107 (322)
T ss_pred             cEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc--CCcceeEeeccCCHHHHHHHHHHHHHhcccccc
Confidence            679999999999999999999999999999988888888777764  55788889999999999999999999874 359


Q ss_pred             cEEEEcCCCC-CCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           80 NILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        80 d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      -.||||||+. ..++.+-.+.+++++++++|++|++.++++++|+++++ .||||++||.+|..+.|..++|++||+|++
T Consensus       108 wglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~a-rGRvVnvsS~~GR~~~p~~g~Y~~SK~aVe  186 (322)
T KOG1610|consen  108 WGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRA-RGRVVNVSSVLGRVALPALGPYCVSKFAVE  186 (322)
T ss_pred             eeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhc-cCeEEEecccccCccCcccccchhhHHHHH
Confidence            9999999975 56788889999999999999999999999999999887 599999999999999999999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCC
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIK  189 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~  189 (259)
                      .|+.++++|+.+.||+|..|.||...|++..
T Consensus       187 af~D~lR~EL~~fGV~VsiiePG~f~T~l~~  217 (322)
T KOG1610|consen  187 AFSDSLRRELRPFGVKVSIIEPGFFKTNLAN  217 (322)
T ss_pred             HHHHHHHHHHHhcCcEEEEeccCccccccCC
Confidence            9999999999999999999999999999985

>PRK06101 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.6e-33  Score=228.03  Aligned_cols=205  Identities=20%  Similarity=0.214  Sum_probs=173.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+.++++.++    ..++.++++|++|.++++++++++.    ..+|
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~----~~~d   73 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ----SANIFTLAFDVTDHPGTKAALSQLP----FIPE   73 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh----cCCCeEEEeeCCCHHHHHHHHHhcc----cCCC
Confidence            6899999999999999999999999999999998776654432    3468889999999999999988763    2579


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      .+|||||.....+..+.+.++|++++++|+.+++.+++++.|+|.+  .+++|++||..+..+.+....|+++|+++++|
T Consensus        74 ~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~  151 (240)
T PRK06101         74 LWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC--GHRVVIVGSIASELALPRAEAYGASKAAVAYF  151 (240)
T ss_pred             EEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCeEEEEechhhccCCCCCchhhHHHHHHHHH
Confidence            9999999754444455789999999999999999999999999854  47899999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPA  230 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  230 (259)
                      +++++.|+.++||++++++||+++|++......               ......+++++++.++..+...
T Consensus       152 ~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~~---------------~~~~~~~~~~~a~~i~~~i~~~  206 (240)
T PRK06101        152 ARTLQLDLRPKGIEVVTVFPGFVATPLTDKNTF---------------AMPMIITVEQASQEIRAQLARG  206 (240)
T ss_pred             HHHHHHHHHhcCceEEEEeCCcCCCCCcCCCCC---------------CCCcccCHHHHHHHHHHHHhcC
Confidence            999999999999999999999999998653211               0112357999999988777543

>PRK07326 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-32  Score=224.24  Aligned_cols=221  Identities=27%  Similarity=0.374  Sum_probs=191.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+|+||.+++++|+++|++|++++|+.++++...+++... .++.++++|+++.+++.++++++.+.+ +++|
T Consensus         7 ~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~d   84 (237)
T PRK07326          7 KVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK-GNVLGLAADVRDEADVQRAVDAIVAAF-GGLD   84 (237)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc-CcEEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence            58999999999999999999999999999999998887777776543 578899999999999999999999888 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +|||++|....+++.+.+.+++++++++|+.+++.+++++++.|. .+.+++|++||..+..+.++...|+++|++++++
T Consensus        85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~iv~~ss~~~~~~~~~~~~y~~sk~a~~~~  163 (237)
T PRK07326         85 VLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALK-RGGGYIINISSLAGTNFFAGGAAYNASKFGLVGF  163 (237)
T ss_pred             EEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHH-HCCeEEEEECChhhccCCCCCchHHHHHHHHHHH
Confidence            999999988777788889999999999999999999999999984 3458999999998888888889999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI  238 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~  238 (259)
                      ++.++.++.+.|++++.++||++.|++........              .....+++|+++.+.++++.....+.+++
T Consensus       164 ~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~--------------~~~~~~~~d~a~~~~~~l~~~~~~~~~~~  227 (237)
T PRK07326        164 SEAAMLDLRQYGIKVSTIMPGSVATHFNGHTPSEK--------------DAWKIQPEDIAQLVLDLLKMPPRTLPSKI  227 (237)
T ss_pred             HHHHHHHhcccCcEEEEEeeccccCcccccccchh--------------hhccCCHHHHHHHHHHHHhCCccccccce
Confidence            99999999889999999999999998764432110              00125799999999999987766665544

>PRK07201 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.1e-33  Score=257.63  Aligned_cols=214  Identities=25%  Similarity=0.332  Sum_probs=187.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|.++++++++++.+.+ +++|
T Consensus       372 k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~-g~id  450 (657)
T PRK07201        372 KVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEH-GHVD  450 (657)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc-CCCC
Confidence            689999999999999999999999999999999999888888877666789999999999999999999999998 6899


Q ss_pred             EEEEcCCCCCCCCCCCC--CHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           81 ILINNAAIAFVKPTVDI--TAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      ++|||||........+.  +.+++++++++|+.+++.+++.++|.|.+++.++||++||.++..+.+....|++||++++
T Consensus       451 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~  530 (657)
T PRK07201        451 YLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAYVASKAALD  530 (657)
T ss_pred             EEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCcchHHHHHHHHH
Confidence            99999998654444332  3688999999999999999999999999887899999999999988899999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCC
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLP  229 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  229 (259)
                      +|+++++.|+.+.||+||+|+||+++|++.......              ......+|+++++.++..+..
T Consensus       531 ~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~~~--------------~~~~~~~~~~~a~~i~~~~~~  587 (657)
T PRK07201        531 AFSDVAASETLSDGITFTTIHMPLVRTPMIAPTKRY--------------NNVPTISPEEAADMVVRAIVE  587 (657)
T ss_pred             HHHHHHHHHHHhhCCcEEEEECCcCcccccCccccc--------------cCCCCCCHHHHHHHHHHHHHh
Confidence            999999999999999999999999999987532110              112346799999998887653

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=4.9e-33  Score=234.15  Aligned_cols=228  Identities=29%  Similarity=0.315  Sum_probs=187.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |+++|||+++|||+++|++|+.+|++|++..|+.++.++..+++...  ..++.++++|+++.+++.++.++..+.+ .+
T Consensus        36 ~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~-~~  114 (314)
T KOG1208|consen   36 KVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKE-GP  114 (314)
T ss_pred             cEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcC-CC
Confidence            68999999999999999999999999999999999999999998853  4578899999999999999999999888 79


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCC-------------CC
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-------------IP  145 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~-------------~~  145 (259)
                      +|++|||||+..+..  ..+.|.+|..|.+|+.|++.+++.++|.|+....+|||++||......             ..
T Consensus       115 ldvLInNAGV~~~~~--~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l~~~~~~~~~  192 (314)
T KOG1208|consen  115 LDVLINNAGVMAPPF--SLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDLSGEKAKLYS  192 (314)
T ss_pred             ccEEEeCcccccCCc--ccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhccchhccCcc
Confidence            999999999986544  667789999999999999999999999999887799999999775110             22


Q ss_pred             CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHH
Q 024994          146 SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAF  225 (259)
Q Consensus       146 ~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~  225 (259)
                      ...+|+.||.+...+++.|++.+.+ ||.++.++||.+.|+...+.   ..   ....+.........-++++-|+..++
T Consensus       193 ~~~~Y~~SKla~~l~~~eL~k~l~~-~V~~~~~hPG~v~t~~l~r~---~~---~~~~l~~~l~~~~~ks~~~ga~t~~~  265 (314)
T KOG1208|consen  193 SDAAYALSKLANVLLANELAKRLKK-GVTTYSVHPGVVKTTGLSRV---NL---LLRLLAKKLSWPLTKSPEQGAATTCY  265 (314)
T ss_pred             chhHHHHhHHHHHHHHHHHHHHhhc-CceEEEECCCcccccceecc---hH---HHHHHHHHHHHHhccCHHHHhhheeh
Confidence            2345999999999999999999977 99999999999999944331   11   22223223333333578899999988


Q ss_pred             HhCCC-CCCccccE
Q 024994          226 LCLPA-ASYITGQI  238 (259)
Q Consensus       226 l~~~~-~~~~~G~~  238 (259)
                      .+... -...+|..
T Consensus       266 ~a~~p~~~~~sg~y  279 (314)
T KOG1208|consen  266 AALSPELEGVSGKY  279 (314)
T ss_pred             hccCccccCccccc
Confidence            88643 35666654

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=100.00  E-value=5.3e-33  Score=215.99  Aligned_cols=163  Identities=42%  Similarity=0.556  Sum_probs=153.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCC--hhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRN--QIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG   77 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (259)
                      |++|||||++|||++++++|+++|. +|++++|+  .+..++..+++...+.++.++++|+++.++++++++++.+.+ +
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~   79 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRF-G   79 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHH-S
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccc-c
Confidence            7999999999999999999999965 78999999  777888888888778899999999999999999999999888 7


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHH
Q 024994           78 KLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAM  157 (259)
Q Consensus        78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~  157 (259)
                      ++|++|||+|....+++.+.+.++|++++++|+.+++.+.+.++|    ++.++||++||..+..|.+.+..|+++|+++
T Consensus        80 ~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~----~~~g~iv~~sS~~~~~~~~~~~~Y~askaal  155 (167)
T PF00106_consen   80 PLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP----QGGGKIVNISSIAGVRGSPGMSAYSASKAAL  155 (167)
T ss_dssp             SESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH----HTTEEEEEEEEGGGTSSSTTBHHHHHHHHHH
T ss_pred             cccccccccccccccccccccchhhhhccccccceeeeeeehhee----ccccceEEecchhhccCCCCChhHHHHHHHH
Confidence            999999999998888899999999999999999999999999999    3479999999999999999999999999999


Q ss_pred             HHHHHHHHHHH
Q 024994          158 NQLTKNLACEW  168 (259)
Q Consensus       158 ~~~~~~~a~e~  168 (259)
                      ++|+++++.|+
T Consensus       156 ~~~~~~la~e~  166 (167)
T PF00106_consen  156 RGLTQSLAAEL  166 (167)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHhc
Confidence            99999999996

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK09291 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.4e-32  Score=223.09  Aligned_cols=221  Identities=26%  Similarity=0.288  Sum_probs=181.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+||||++++++|+++|++|++++|+.+..+++.......+.++.++.+|++|.+++.++++       +++|
T Consensus         3 ~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~id   75 (257)
T PRK09291          3 KTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAE-------WDVD   75 (257)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc-------CCCC
Confidence            589999999999999999999999999999999887777666655556678899999999998877653       4799


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||....++..+.+.+++++.+++|+.+++.+++.+++.+.+.+.++||++||..+..+.++...|++||++++++
T Consensus        76 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~Y~~sK~a~~~~  155 (257)
T PRK09291         76 VLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALEAI  155 (257)
T ss_pred             EEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCCcchhHHHHHHHHHH
Confidence            99999999877888889999999999999999999999999999887779999999998888888889999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCC-----CchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCC
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGP-----EGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLP  229 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  229 (259)
                      +++++.++.+.||+++.|+||++.|++........     .............+. ...++++++..+..++..
T Consensus       156 ~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~  228 (257)
T PRK09291        156 AEAMHAELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPEDLAFPL-EQFDPQEMIDAMVEVIPA  228 (257)
T ss_pred             HHHHHHHHHhcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhhhhhccc-cCCCHHHHHHHHHHHhcC
Confidence            99999999889999999999999998764322110     000011111111222 235788988888777643

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=8.6e-33  Score=227.49  Aligned_cols=207  Identities=26%  Similarity=0.342  Sum_probs=170.0

Q ss_pred             HHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCC
Q 024994           16 TVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTV   95 (259)
Q Consensus        16 ~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~   95 (259)
                      ++++|+++|++|++++|+.++.+.           ..++++|++|.++++++++++.    +++|+||||||....    
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~~-----------~~~~~~Dl~~~~~v~~~~~~~~----~~iD~li~nAG~~~~----   61 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMTL-----------DGFIQADLGDPASIDAAVAALP----GRIDALFNIAGVPGT----   61 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhhh-----------hHhhcccCCCHHHHHHHHHHhc----CCCeEEEECCCCCCC----
Confidence            478999999999999998776421           2356899999999999988763    579999999997521    


Q ss_pred             CCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCcc---------------------------CCCCCCh
Q 024994           96 DITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV---------------------------RGIPSVS  148 (259)
Q Consensus        96 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~---------------------------~~~~~~~  148 (259)
                          +++++++++|+.+++.+++.++|+|.+  .++||++||..+.                           .+.++..
T Consensus        62 ----~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  135 (241)
T PRK12428         62 ----APVELVARVNFLGLRHLTEALLPRMAP--GGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALAT  135 (241)
T ss_pred             ----CCHHHhhhhchHHHHHHHHHHHHhccC--CcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCccc
Confidence                347899999999999999999999864  4899999998875                           3566788


Q ss_pred             hhhhhHHHHHHHHHHHH-HHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHh
Q 024994          149 LYGAYKGAMNQLTKNLA-CEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLC  227 (259)
Q Consensus       149 ~Y~~sK~a~~~~~~~~a-~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  227 (259)
                      .|++||+++++|+++++ .|+.++|||||+|+||+++|++......... .....  ....|.++..+|+|++++++|++
T Consensus       136 ~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~-~~~~~--~~~~~~~~~~~pe~va~~~~~l~  212 (241)
T PRK12428        136 GYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLG-QERVD--SDAKRMGRPATADEQAAVLVFLC  212 (241)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhhhh-hHhhh--hcccccCCCCCHHHHHHHHHHHc
Confidence            99999999999999999 9999999999999999999998765322111 11111  13457888999999999999999


Q ss_pred             CCCCCCccccEEEeCCCceeeec
Q 024994          228 LPAASYITGQIICVDGGVTVTVN  250 (259)
Q Consensus       228 ~~~~~~~~G~~l~~dgG~~~~~~  250 (259)
                      ++.+.+++|+.+.+|||......
T Consensus       213 s~~~~~~~G~~i~vdgg~~~~~~  235 (241)
T PRK12428        213 SDAARWINGVNLPVDGGLAATYI  235 (241)
T ss_pred             ChhhcCccCcEEEecCchHHHhh
Confidence            98889999999999999765443

>PRK08017 oxidoreductase; Provisional

Probab=100.00  E-value=1.4e-31  Score=221.83  Aligned_cols=223  Identities=25%  Similarity=0.305  Sum_probs=184.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+|+||.+++++|+++|++|++++|+.++++...+      ..+.++++|++|.+++.++++.+.+..++++|
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~   76 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS------LGFTGILLDLDDPESVERAADEVIALTDNRLY   76 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh------CCCeEEEeecCCHHHHHHHHHHHHHhcCCCCe
Confidence            589999999999999999999999999999999877655421      14678899999999999999988776546799


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      .+||++|.....+..+.+.+++++++++|+.+++.+++.++|.|.+.+.+++|++||..+..+.+....|+++|++++.+
T Consensus        77 ~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~~~~~~  156 (256)
T PRK08017         77 GLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEAW  156 (256)
T ss_pred             EEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCCccHHHHHHHHHHHH
Confidence            99999998766777788999999999999999999999999999887778999999998988889999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCC
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAAS  232 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  232 (259)
                      +++++.++.+.+++++.++||++.|++................   ......+.+++|+++.+..+++....
T Consensus       157 ~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~d~a~~~~~~~~~~~~  225 (256)
T PRK08017        157 SDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENP---GIAARFTLGPEAVVPKLRHALESPKP  225 (256)
T ss_pred             HHHHHHHHhhcCCEEEEEeCCCcccchhhcccchhhccchhhh---HHHhhcCCCHHHHHHHHHHHHhCCCC
Confidence            9999999999999999999999999887543221110000000   00011247899999999999976544

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.1e-31  Score=217.01  Aligned_cols=220  Identities=22%  Similarity=0.181  Sum_probs=191.0

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      .++|||||+|||+++|..+..+|++|.++.|+.++++++.++++-.  -.++.+..+|+.|.+++..+++++.+.+ +++
T Consensus        35 hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~-~~~  113 (331)
T KOG1210|consen   35 HILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLE-GPI  113 (331)
T ss_pred             eEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhcc-CCc
Confidence            6899999999999999999999999999999999999998888643  3347899999999999999999999988 799


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      |.+|+|||...++-+.+.+.++++..+++|++++++++++.+|.|++.. .|+|+.+||..+..+..++++|+++|+|+.
T Consensus       114 d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaYs~sK~alr  193 (331)
T KOG1210|consen  114 DNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAYSPSKFALR  193 (331)
T ss_pred             ceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccccccccHHHHHH
Confidence            9999999999999999999999999999999999999999999998765 579999999999999999999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHh
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLC  227 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  227 (259)
                      +++..+++|+.++||+|....|+.+.||.+........  .. ..+.+  .......+|+++.+++.=+
T Consensus       194 gLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~tkP--~~-t~ii~--g~ss~~~~e~~a~~~~~~~  257 (331)
T KOG1210|consen  194 GLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKTKP--EE-TKIIE--GGSSVIKCEEMAKAIVKGM  257 (331)
T ss_pred             HHHHHHHHHHhhcceEEEEEcCCCCCCCccccccccCc--hh-eeeec--CCCCCcCHHHHHHHHHhHH
Confidence            99999999999999999999999999998865432211  11 11111  1222357899998875433

>PRK08264 short chain dehydrogenase; Validated

Probab=100.00  E-value=8e-31  Score=215.16  Aligned_cols=199  Identities=27%  Similarity=0.325  Sum_probs=172.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||+|+||++++++|+++|+ +|++++|+.++.++       .+.++.++.+|++|.++++++++..     +++
T Consensus         7 ~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~~-----~~i   74 (238)
T PRK08264          7 KVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-------LGPRVVPLQLDVTDPASVAAAAEAA-----SDV   74 (238)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-------cCCceEEEEecCCCHHHHHHHHHhc-----CCC
Confidence            5899999999999999999999999 99999999876543       2457889999999999988877653     579


Q ss_pred             cEEEEcCCC-CCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           80 NILINNAAI-AFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        80 d~vi~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      |+|||++|. ....++.+.+.+++++.+++|+.+++.+++++.|.+.+.+.+++|++||..+..+.++...|+.+|++++
T Consensus        75 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK~a~~  154 (238)
T PRK08264         75 TILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASKAAAW  154 (238)
T ss_pred             CEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCCchHhHHHHHHHH
Confidence            999999998 4556777889999999999999999999999999998777899999999999888899999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCC
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLP  229 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  229 (259)
                      ++++.++.++.+.|++++.++||.++|++......                  ...+++++++.++..+..
T Consensus       155 ~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~~~~------------------~~~~~~~~a~~~~~~~~~  207 (238)
T PRK08264        155 SLTQALRAELAPQGTRVLGVHPGPIDTDMAAGLDA------------------PKASPADVARQILDALEA  207 (238)
T ss_pred             HHHHHHHHHhhhcCeEEEEEeCCcccccccccCCc------------------CCCCHHHHHHHHHHHHhC
Confidence            99999999999899999999999999998543211                  134577788877766653

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=100.00  E-value=2.7e-32  Score=222.60  Aligned_cols=186  Identities=29%  Similarity=0.376  Sum_probs=167.6

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHHHc-CCCc
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSSREQREKLIETVTSIF-QGKL   79 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~i   79 (259)
                      =++|||||.|||++.|++|+++|.+|++++|++++++...+|+.+. +..++++.+|+++.+.+   .+.+.+.. +.++
T Consensus        51 WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~---ye~i~~~l~~~~V  127 (312)
T KOG1014|consen   51 WAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEV---YEKLLEKLAGLDV  127 (312)
T ss_pred             EEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchh---HHHHHHHhcCCce
Confidence            3799999999999999999999999999999999999999999866 45789999999987762   22333322 1368


Q ss_pred             cEEEEcCCCCC--CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHH
Q 024994           80 NILINNAAIAF--VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAM  157 (259)
Q Consensus        80 d~vi~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~  157 (259)
                      -+||||+|..+  +..+.+.+.+.+++.+.+|+.+...+++.++|.|.+++.|-|+++||.++..|.|.+..|++||+.+
T Consensus       128 gILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s~ysasK~~v  207 (312)
T KOG1014|consen  128 GILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLSVYSASKAFV  207 (312)
T ss_pred             EEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHHHHHHHHHHH
Confidence            89999999876  6677888888999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEeCCceeCCCCCC
Q 024994          158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP  190 (259)
Q Consensus       158 ~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~  190 (259)
                      +.|+++|+.||.++||.|.++.|..|.|+|...
T Consensus       208 ~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~  240 (312)
T KOG1014|consen  208 DFFSRCLQKEYESKGIFVQSVIPYLVATKMAKY  240 (312)
T ss_pred             HHHHHHHHHHHHhcCeEEEEeehhheecccccc
Confidence            999999999999999999999999999999754

>PRK08177 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.3e-31  Score=214.19  Aligned_cols=180  Identities=24%  Similarity=0.306  Sum_probs=155.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+++|||+++|||.+++++|+++|++|++++|+.+..+.+. ++    .++.+..+|++|.++++++++++.+   +++|
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~----~~~~~~~~D~~d~~~~~~~~~~~~~---~~id   73 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQ-AL----PGVHIEKLDMNDPASLDQLLQRLQG---QRFD   73 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHH-hc----cccceEEcCCCCHHHHHHHHHHhhc---CCCC
Confidence            68999999999999999999999999999999987655432 21    2567788999999999999988743   4799


Q ss_pred             EEEEcCCCCCC--CCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCC---CCChhhhhhHH
Q 024994           81 ILINNAAIAFV--KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI---PSVSLYGAYKG  155 (259)
Q Consensus        81 ~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~---~~~~~Y~~sK~  155 (259)
                      +||||||....  .+..+.+.+++++.+++|+.+++.+++.++|.+.+. .+.++++||..+..+.   ..+..|+++|+
T Consensus        74 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~iv~~ss~~g~~~~~~~~~~~~Y~~sK~  152 (225)
T PRK08177         74 LLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG-QGVLAFMSSQLGSVELPDGGEMPLYKASKA  152 (225)
T ss_pred             EEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc-CCEEEEEccCccccccCCCCCccchHHHHH
Confidence            99999998633  356678899999999999999999999999998653 4899999997765543   35678999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEeCCceeCCCCC
Q 024994          156 AMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK  189 (259)
Q Consensus       156 a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~  189 (259)
                      +++.|+++++.++.+++|++|+|+||+++|++..
T Consensus       153 a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~  186 (225)
T PRK08177        153 ALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMGG  186 (225)
T ss_pred             HHHHHHHHHHHHhhcCCeEEEEEcCCceecCCCC
Confidence            9999999999999999999999999999999864

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.98  E-value=5.2e-30  Score=208.38  Aligned_cols=213  Identities=23%  Similarity=0.211  Sum_probs=175.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+++||.+++++|+++|++|++++|+.+..+++..    .  .+.++++|+++.++++++++++..   +++|
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~----~--~~~~~~~D~~~~~~v~~~~~~~~~---~~~d   72 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQA----L--GAEALALDVADPASVAGLAWKLDG---EALD   72 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHh----c--cceEEEecCCCHHHHHHHHHHhcC---CCCC
Confidence            689999999999999999999999999999999877654332    1  356789999999999988776532   4799


Q ss_pred             EEEEcCCCCCC--CCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCC---hhhhhhHH
Q 024994           81 ILINNAAIAFV--KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSV---SLYGAYKG  155 (259)
Q Consensus        81 ~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~---~~Y~~sK~  155 (259)
                      ++|||+|....  .+..+.+.+++++++++|+.+++.+++++.|+|.+. .+++++++|..+..+....   ..|+++|+
T Consensus        73 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~~~Y~~sK~  151 (222)
T PRK06953         73 AAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAA-GGVLAVLSSRMGSIGDATGTTGWLYRASKA  151 (222)
T ss_pred             EEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhcc-CCeEEEEcCcccccccccCCCccccHHhHH
Confidence            99999998632  355677899999999999999999999999998654 5899999998776654322   35999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcc
Q 024994          156 AMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT  235 (259)
Q Consensus       156 a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~  235 (259)
                      +++++++.++.++  .+++++.|+||+++|++....                    ....+++.++.+..++.......+
T Consensus       152 a~~~~~~~~~~~~--~~i~v~~v~Pg~i~t~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~  209 (222)
T PRK06953        152 ALNDALRAASLQA--RHATCIALHPGWVRTDMGGAQ--------------------AALDPAQSVAGMRRVIAQATRRDN  209 (222)
T ss_pred             HHHHHHHHHhhhc--cCcEEEEECCCeeecCCCCCC--------------------CCCCHHHHHHHHHHHHHhcCcccC
Confidence            9999999999886  479999999999999986421                    123578888888888776778899


Q ss_pred             ccEEEeCCCc
Q 024994          236 GQIICVDGGV  245 (259)
Q Consensus       236 G~~l~~dgG~  245 (259)
                      |.++..|++.
T Consensus       210 ~~~~~~~~~~  219 (222)
T PRK06953        210 GRFFQYDGVE  219 (222)
T ss_pred             ceEEeeCCcC
Confidence            9999999773

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.3e-29  Score=203.90  Aligned_cols=218  Identities=28%  Similarity=0.350  Sum_probs=180.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+|+||++++++|+++ ++|++++|+.+..+...++.    ..+.++++|++|.+++++++++.     +++|
T Consensus         4 ~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~-----~~id   73 (227)
T PRK08219          4 PTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL----PGATPFPVDLTDPEAIAAAVEQL-----GRLD   73 (227)
T ss_pred             CEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh----ccceEEecCCCCHHHHHHHHHhc-----CCCC
Confidence            68999999999999999999999 99999999987765544332    25778899999999988887653     4799


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +|||++|.....+..+.+.+++.+++++|+.+++.+.+.+++.+.+. .+++|++||..+..+.++...|+.+|++++++
T Consensus        74 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~~~~~~y~~~K~a~~~~  152 (227)
T PRK08219         74 VLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA-HGHVVFINSGAGLRANPGWGSYAASKFALRAL  152 (227)
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEcchHhcCcCCCCchHHHHHHHHHHH
Confidence            99999998776677788899999999999999999999999998776 58999999999988888899999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC  240 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~  240 (259)
                      ++.++.++... ++++.++||++++++........         ....+..++.+++|++++++++++...   .|.+++
T Consensus       153 ~~~~~~~~~~~-i~~~~i~pg~~~~~~~~~~~~~~---------~~~~~~~~~~~~~dva~~~~~~l~~~~---~~~~~~  219 (227)
T PRK08219        153 ADALREEEPGN-VRVTSVHPGRTDTDMQRGLVAQE---------GGEYDPERYLRPETVAKAVRFAVDAPP---DAHITE  219 (227)
T ss_pred             HHHHHHHhcCC-ceEEEEecCCccchHhhhhhhhh---------ccccCCCCCCCHHHHHHHHHHHHcCCC---CCccce
Confidence            99999988766 99999999999887654322110         112234567899999999999996543   455555


Q ss_pred             eC
Q 024994          241 VD  242 (259)
Q Consensus       241 ~d  242 (259)
                      ++
T Consensus       220 ~~  221 (227)
T PRK08219        220 VV  221 (227)
T ss_pred             EE
Confidence            44

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=3.6e-31  Score=206.05  Aligned_cols=237  Identities=24%  Similarity=0.188  Sum_probs=190.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|+||+|.|||..++..+...+-.....+++....+ .....-..++.......|++...-+.+.++..++.. ++.|
T Consensus         7 ~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~-~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~-gkr~   84 (253)
T KOG1204|consen    7 KVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE-LEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKG-GKRD   84 (253)
T ss_pred             eEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc-ccceEEEecCCcceechHHHHHHHHHHHHhhhhhcC-Ccee
Confidence            57899999999999999988887755444443332222 110011123455556678888888888888888877 6899


Q ss_pred             EEEEcCCCCCCC-CC--CCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccCCCCCChhhhhhHHH
Q 024994           81 ILINNAAIAFVK-PT--VDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGA  156 (259)
Q Consensus        81 ~vi~~ag~~~~~-~~--~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~~~~~~~~Y~~sK~a  156 (259)
                      ++|||||...+. ..  +..+.++|++.++.|+++++.+.+.++|.+++.. .+.++|+||.++..|++.|+.|+++|+|
T Consensus        85 iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~wa~yc~~KaA  164 (253)
T KOG1204|consen   85 IIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSWAAYCSSKAA  164 (253)
T ss_pred             EEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHHHHhhhhHHH
Confidence            999999987442 22  3678999999999999999999999999998874 7999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCC-CchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcc
Q 024994          157 MNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGP-EGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT  235 (259)
Q Consensus       157 ~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~  235 (259)
                      .++|.+.+|.|-- .+|++.+++||.++|+|+...+... ..+.....+.+....+++.+|...++.+..|+... .+.+
T Consensus       165 r~m~f~~lA~EEp-~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~~~ll~~~~~a~~l~~L~e~~-~f~s  242 (253)
T KOG1204|consen  165 RNMYFMVLASEEP-FDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKESGQLLDPQVTAKVLAKLLEKG-DFVS  242 (253)
T ss_pred             HHHHHHHHhhcCc-cceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhcCCcCChhhHHHHHHHHHHhc-Cccc
Confidence            9999999999853 7999999999999999997665544 45557778888888899999999999999888533 2899


Q ss_pred             ccEEEe
Q 024994          236 GQIICV  241 (259)
Q Consensus       236 G~~l~~  241 (259)
                      |+++..
T Consensus       243 G~~vdy  248 (253)
T KOG1204|consen  243 GQHVDY  248 (253)
T ss_pred             cccccc
Confidence            998764

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.1e-28  Score=203.24  Aligned_cols=192  Identities=16%  Similarity=0.093  Sum_probs=146.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.......   ... . ...++.+|++|.+++++.       + +++|
T Consensus        15 k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~---~~~-~-~~~~~~~D~~~~~~~~~~-------~-~~iD   81 (245)
T PRK12367         15 KRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSES---NDE-S-PNEWIKWECGKEESLDKQ-------L-ASLD   81 (245)
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhh---hcc-C-CCeEEEeeCCCHHHHHHh-------c-CCCC
Confidence            6899999999999999999999999999999987322111   111 1 235778999999876542       3 5899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC---CCCEEEEecCCCccCCCCCChhhhhhHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS---GNGSIVFISSVGGVRGIPSVSLYGAYKGAM  157 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~  157 (259)
                      ++|||||...   ..+.+.++|++++++|+.+++.+++.++|.|.++   +++.+++.+|.++..+ +....|++||+++
T Consensus        82 ilVnnAG~~~---~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~-~~~~~Y~aSKaal  157 (245)
T PRK12367         82 VLILNHGINP---GGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP-ALSPSYEISKRLI  157 (245)
T ss_pred             EEEECCccCC---cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC-CCCchhHHHHHHH
Confidence            9999999753   3346789999999999999999999999999763   2334545556555444 4567899999998


Q ss_pred             HHHH---HHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 024994          158 NQLT---KNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPA  230 (259)
Q Consensus       158 ~~~~---~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  230 (259)
                      ..+.   +.++.|+.+.+++++.+.||+++|++..                     ....+|+++++.+++.++..
T Consensus       158 ~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~~---------------------~~~~~~~~vA~~i~~~~~~~  212 (245)
T PRK12367        158 GQLVSLKKNLLDKNERKKLIIRKLILGPFRSELNP---------------------IGIMSADFVAKQILDQANLG  212 (245)
T ss_pred             HHHHHHHHHHHHhhcccccEEEEecCCCcccccCc---------------------cCCCCHHHHHHHHHHHHhcC
Confidence            6554   4444455678999999999999988621                     01357999999999998644

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.95  E-value=4e-26  Score=198.87  Aligned_cols=192  Identities=21%  Similarity=0.174  Sum_probs=148.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+++||||+||||++++++|+++|++|++++|+.++++....   .....+..+.+|++|.+++.+.+        +++|
T Consensus       179 K~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~---~~~~~v~~v~~Dvsd~~~v~~~l--------~~ID  247 (406)
T PRK07424        179 KTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEIN---GEDLPVKTLHWQVGQEAALAELL--------EKVD  247 (406)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh---hcCCCeEEEEeeCCCHHHHHHHh--------CCCC
Confidence            689999999999999999999999999999998876543321   22335678889999998876543        5799


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCC----CEEEEecCCCccCCCCCChhhhhhHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGN----GSIVFISSVGGVRGIPSVSLYGAYKGA  156 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~----~~ii~isS~~~~~~~~~~~~Y~~sK~a  156 (259)
                      ++|||||....   .+.+.+++++++++|+.+++.++++++|.|++++.    +.++++|+ +. .+.+..+.|++||+|
T Consensus       248 iLInnAGi~~~---~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~-~~~~~~~~Y~ASKaA  322 (406)
T PRK07424        248 ILIINHGINVH---GERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AE-VNPAFSPLYELSKRA  322 (406)
T ss_pred             EEEECCCcCCC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-cc-ccCCCchHHHHHHHH
Confidence            99999997532   35788999999999999999999999999986542    34566654 33 333456789999999


Q ss_pred             HHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCC
Q 024994          157 MNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAAS  232 (259)
Q Consensus       157 ~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  232 (259)
                      +.++++ ++++.  .++.+..+.||++.|++..                    . ...+||++|+.+++.++...+
T Consensus       323 l~~l~~-l~~~~--~~~~I~~i~~gp~~t~~~~--------------------~-~~~spe~vA~~il~~i~~~~~  374 (406)
T PRK07424        323 LGDLVT-LRRLD--APCVVRKLILGPFKSNLNP--------------------I-GVMSADWVAKQILKLAKRDFR  374 (406)
T ss_pred             HHHHHH-HHHhC--CCCceEEEEeCCCcCCCCc--------------------C-CCCCHHHHHHHHHHHHHCCCC
Confidence            999985 44432  4677778889998887531                    0 134799999999999976554

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.94  E-value=1.5e-25  Score=174.89  Aligned_cols=175  Identities=23%  Similarity=0.299  Sum_probs=150.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHH---HHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDAR---LHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ   76 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (259)
                      |+++||||+++||.+++++|+++|. .|++++|+.+..+..   .++++..+.++.++.+|+++.++++++++++.+.+ 
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   79 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARL-   79 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            6899999999999999999999997 688888876543322   34555556688899999999999999999998888 


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHH
Q 024994           77 GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGA  156 (259)
Q Consensus        77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  156 (259)
                      +++|.+||++|.....+..+.+.+++++++++|+.+++.+.+.+    .+.+.++++++||..+..+.+++..|+++|++
T Consensus        80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~~  155 (180)
T smart00822       80 GPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELT----RDLPLDFFVLFSSVAGVLGNPGQANYAAANAF  155 (180)
T ss_pred             CCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHh----ccCCcceEEEEccHHHhcCCCCchhhHHHHHH
Confidence            68999999999877677788899999999999999999999988    33456899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCceEEEEeCCcee
Q 024994          157 MNQLTKNLACEWAKDNIRTNTVAPWVIK  184 (259)
Q Consensus       157 ~~~~~~~~a~e~~~~gi~v~~v~pg~v~  184 (259)
                      ++.+++.++.    .+++++.+.||++.
T Consensus       156 ~~~~~~~~~~----~~~~~~~~~~g~~~  179 (180)
T smart00822      156 LDALAAHRRA----RGLPATSINWGAWA  179 (180)
T ss_pred             HHHHHHHHHh----cCCceEEEeecccc
Confidence            9999987643    48899999999874

It uses NADPH to reduce the keto group to a hydroxy group.

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.94  E-value=6.4e-25  Score=223.26  Aligned_cols=181  Identities=19%  Similarity=0.204  Sum_probs=157.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHC-CCEEEEeeCCh---------------------------------------------
Q 024994            1 MTALVTGGTRGIGHATVEELARF-GAIVHTCSRNQ---------------------------------------------   34 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~-G~~V~~~~r~~---------------------------------------------   34 (259)
                      |++|||||++|||.+++++|+++ |++|++++|+.                                             
T Consensus      1998 ~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~~~ 2077 (2582)
T TIGR02813      1998 DVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRPVL 2077 (2582)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccccc
Confidence            58999999999999999999998 69999999982                                             


Q ss_pred             --hHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHh
Q 024994           35 --IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFES  112 (259)
Q Consensus        35 --~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~  112 (259)
                        ......++++...+..+.++.+|++|.++++++++++.+.  +++|.||||||+.....+.+.+.++|+++|++|+.|
T Consensus      2078 ~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~--g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G 2155 (2582)
T TIGR02813      2078 SSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKT--LQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDG 2155 (2582)
T ss_pred             hhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh--CCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHH
Confidence              1111223334445678899999999999999999999876  479999999999877888899999999999999999


Q ss_pred             HHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCC
Q 024994          113 VFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK  189 (259)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~  189 (259)
                      .+.+++++.+.+    .++||++||..++++.+++..|+++|++++.+++.++.++.  ++||++|+||+++|+|..
T Consensus      2156 ~~~Ll~al~~~~----~~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~~--~irV~sI~wG~wdtgm~~ 2226 (2582)
T TIGR02813      2156 LLSLLAALNAEN----IKLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALNP--SAKVMSFNWGPWDGGMVN 2226 (2582)
T ss_pred             HHHHHHHHHHhC----CCeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHcC--CcEEEEEECCeecCCccc
Confidence            999988885543    35899999999999999999999999999999999998873  599999999999998863

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.93  E-value=2.4e-24  Score=192.30  Aligned_cols=218  Identities=17%  Similarity=0.154  Sum_probs=163.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhc---------CCcEEEEEecCCCHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK---------GFKVTGSVCDLSSREQREKLIETV   71 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---------~~~~~~~~~D~~~~~~~~~~~~~~   71 (259)
                      |++|||||+|+||++++++|+++|++|++++|+.++++.+.+++.+.         ..++.++.+|++|.+++.+.+   
T Consensus        81 KvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aL---  157 (576)
T PLN03209         81 DLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPAL---  157 (576)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHh---
Confidence            68999999999999999999999999999999998887766554321         135889999999998876543   


Q ss_pred             HHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCcc-CCCCCChhh
Q 024994           72 TSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV-RGIPSVSLY  150 (259)
Q Consensus        72 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~-~~~~~~~~Y  150 (259)
                           +++|+||||+|....      ...++...+++|+.+..++++++.    +.+.++||++||.++. .+.+.. .|
T Consensus       158 -----ggiDiVVn~AG~~~~------~v~d~~~~~~VN~~Gt~nLl~Aa~----~agVgRIV~VSSiga~~~g~p~~-~~  221 (576)
T PLN03209        158 -----GNASVVICCIGASEK------EVFDVTGPYRIDYLATKNLVDAAT----VAKVNHFILVTSLGTNKVGFPAA-IL  221 (576)
T ss_pred             -----cCCCEEEEccccccc------cccchhhHHHHHHHHHHHHHHHHH----HhCCCEEEEEccchhcccCcccc-ch
Confidence                 579999999996421      122467788999999999998873    4456899999998764 333322 24


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 024994          151 GAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPA  230 (259)
Q Consensus       151 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  230 (259)
                      . +|+++..+.+.+..++...||+++.|+||++.|++......  .   .........+.++.++.+|||++++|++++.
T Consensus       222 ~-sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~~~~t--~---~v~~~~~d~~~gr~isreDVA~vVvfLasd~  295 (576)
T PLN03209        222 N-LFWGVLCWKRKAEEALIASGLPYTIVRPGGMERPTDAYKET--H---NLTLSEEDTLFGGQVSNLQVAELMACMAKNR  295 (576)
T ss_pred             h-hHHHHHHHHHHHHHHHHHcCCCEEEEECCeecCCccccccc--c---ceeeccccccCCCccCHHHHHHHHHHHHcCc
Confidence            4 78888888999999998899999999999999885432111  0   0111122356678889999999999999854


Q ss_pred             CCCccccEEEeCCC
Q 024994          231 ASYITGQIICVDGG  244 (259)
Q Consensus       231 ~~~~~G~~l~~dgG  244 (259)
                      .. -.++++.+-.+
T Consensus       296 ~a-s~~kvvevi~~  308 (576)
T PLN03209        296 RL-SYCKVVEVIAE  308 (576)
T ss_pred             hh-ccceEEEEEeC
Confidence            31 23455655544

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.93  E-value=7.4e-24  Score=181.66  Aligned_cols=215  Identities=18%  Similarity=0.135  Sum_probs=158.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCC--CEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFG--AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||+|+||++++++|+++|  ++|++++|+......+.+++.  ..++.++.+|++|.+++.++++        .
T Consensus         5 k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~l~~~~~--------~   74 (324)
T TIGR03589         5 KSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFP--APCLRFFIGDVRDKERLTRALR--------G   74 (324)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhC--CCcEEEEEccCCCHHHHHHHHh--------c
Confidence            689999999999999999999987  789999998765544333331  2468899999999998887763        5


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      +|+|||+||.... +..+.+   .++++++|+.+++++++++.    +.+.++||++||.....   +...|++||++.+
T Consensus        75 iD~Vih~Ag~~~~-~~~~~~---~~~~~~~Nv~g~~~ll~aa~----~~~~~~iV~~SS~~~~~---p~~~Y~~sK~~~E  143 (324)
T TIGR03589        75 VDYVVHAAALKQV-PAAEYN---PFECIRTNINGAQNVIDAAI----DNGVKRVVALSTDKAAN---PINLYGATKLASD  143 (324)
T ss_pred             CCEEEECcccCCC-chhhcC---HHHHHHHHHHHHHHHHHHHH----HcCCCEEEEEeCCCCCC---CCCHHHHHHHHHH
Confidence            8999999997532 222222   35689999999999999985    34457999999976543   3467999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhc---CCC------CCCCCHHHHHHHHHHHhCC
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQ---TPI------GRAGEPDEVSSLVAFLCLP  229 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~---~~~------~~~~~~~~va~~~~~l~~~  229 (259)
                      .++++++.++.+.|+++++++||+++++...      ....+.......   .+.      .-+..++|++++++..+..
T Consensus       144 ~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~------~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al~~  217 (324)
T TIGR03589       144 KLFVAANNISGSKGTRFSVVRYGNVVGSRGS------VVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSLER  217 (324)
T ss_pred             HHHHHHHhhccccCcEEEEEeecceeCCCCC------cHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHHhh
Confidence            9999998887788999999999999987421      111122222222   121      1256899999999888753


Q ss_pred             CCCCccccEEEeCCCce
Q 024994          230 AASYITGQIICVDGGVT  246 (259)
Q Consensus       230 ~~~~~~G~~l~~dgG~~  246 (259)
                      .   ..|+++ +..|..
T Consensus       218 ~---~~~~~~-~~~~~~  230 (324)
T TIGR03589       218 M---LGGEIF-VPKIPS  230 (324)
T ss_pred             C---CCCCEE-ccCCCc
Confidence            2   246666 455543

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.93  E-value=6.4e-24  Score=182.15  Aligned_cols=225  Identities=13%  Similarity=0.096  Sum_probs=161.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHh--cCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKN--KGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||+|+||++++++|+++|++|++++|+....+........  ...++.++.+|++|.++++++++        +
T Consensus         6 k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--------~   77 (325)
T PLN02989          6 KVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID--------G   77 (325)
T ss_pred             CEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc--------C
Confidence            7899999999999999999999999999999887655443222211  12468899999999998887764        5


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCC-------------
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIP-------------  145 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~-------------  145 (259)
                      +|+|||+||....    ..+.+++.+.+++|+.+++.+++++.+.+   +.++||++||..++.+..             
T Consensus        78 ~d~vih~A~~~~~----~~~~~~~~~~~~~n~~g~~~ll~a~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~  150 (325)
T PLN02989         78 CETVFHTASPVAI----TVKTDPQVELINPAVNGTINVLRTCTKVS---SVKRVILTSSMAAVLAPETKLGPNDVVDETF  150 (325)
T ss_pred             CCEEEEeCCCCCC----CCCCChHHHHHHHHHHHHHHHHHHHHHcC---CceEEEEecchhheecCCccCCCCCccCcCC
Confidence            8999999996422    22345678899999999999999986543   247999999976643211             


Q ss_pred             ---------CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCC----CC
Q 024994          146 ---------SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPI----GR  212 (259)
Q Consensus       146 ---------~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~----~~  212 (259)
                               ....|+.||.+.+.+++.++.++   +++++.++|+.+++|...... ...............+.    ..
T Consensus       151 ~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~vyGp~~~~~~-~~~~~~i~~~~~~~~~~~~~~r~  226 (325)
T PLN02989        151 FTNPSFAEERKQWYVLSKTLAEDAAWRFAKDN---EIDLIVLNPGLVTGPILQPTL-NFSVAVIVELMKGKNPFNTTHHR  226 (325)
T ss_pred             CCchhHhcccccchHHHHHHHHHHHHHHHHHc---CCeEEEEcCCceeCCCCCCCC-CchHHHHHHHHcCCCCCCCcCcC
Confidence                     02469999999999999987665   899999999999999764321 11111112111222232    24


Q ss_pred             CCCHHHHHHHHHHHhCCCCCCccccEEEeCCCceee
Q 024994          213 AGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVT  248 (259)
Q Consensus       213 ~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~  248 (259)
                      +..++|++++++.++....  . +..++++|+ .++
T Consensus       227 ~i~v~Dva~a~~~~l~~~~--~-~~~~ni~~~-~~s  258 (325)
T PLN02989        227 FVDVRDVALAHVKALETPS--A-NGRYIIDGP-VVT  258 (325)
T ss_pred             eeEHHHHHHHHHHHhcCcc--c-CceEEEecC-CCC
Confidence            6678999999988875432  2 346888544 443

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.92  E-value=3.6e-23  Score=179.20  Aligned_cols=227  Identities=16%  Similarity=0.034  Sum_probs=163.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+|+||.++++.|+++|++|++++|+..........+. ...++.++.+|++|.+++.+++++.      ++|
T Consensus         5 k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~------~~d   77 (349)
T TIGR02622         5 KKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLN-LAKKIEDHFGDIRDAAKLRKAIAEF------KPE   77 (349)
T ss_pred             CEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHh-hcCCceEEEccCCCHHHHHHHHhhc------CCC
Confidence            689999999999999999999999999999998765443333232 1335778899999999998888753      689


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccC------------CCCCC
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVR------------GIPSV  147 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~------------~~~~~  147 (259)
                      +|||+|+....    ..+.+++...+++|+.+++.+++++.    +.+ .+++|++||...+.            +..+.
T Consensus        78 ~vih~A~~~~~----~~~~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~  149 (349)
T TIGR02622        78 IVFHLAAQPLV----RKSYADPLETFETNVMGTVNLLEAIR----AIGSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGH  149 (349)
T ss_pred             EEEECCccccc----ccchhCHHHHHHHhHHHHHHHHHHHH----hcCCCCEEEEEechhhhCCCCCCCCCccCCCCCCC
Confidence            99999996422    23456677889999999999999873    222 46999999964321            22345


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHcc----CCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCC--------CCCCCC
Q 024994          148 SLYGAYKGAMNQLTKNLACEWAK----DNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTP--------IGRAGE  215 (259)
Q Consensus       148 ~~Y~~sK~a~~~~~~~~a~e~~~----~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~  215 (259)
                      ..|+.||.+.+.+++.++.++.+    ++++++.++|+.+++|....  .......+........+        ..-+..
T Consensus       150 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~--~~~~~~~~~~~~~~g~~~~~~~g~~~rd~i~  227 (349)
T TIGR02622       150 DPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWA--EDRLIPDVIRAFSSNKIVIIRNPDATRPWQH  227 (349)
T ss_pred             CcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcch--hhhhhHHHHHHHhcCCCeEECCCCcccceee
Confidence            78999999999999999888754    48999999999999985321  11111123333322211        122456


Q ss_pred             HHHHHHHHHHHhCCC--CCCccccEEEeCCC
Q 024994          216 PDEVSSLVAFLCLPA--ASYITGQIICVDGG  244 (259)
Q Consensus       216 ~~~va~~~~~l~~~~--~~~~~G~~l~~dgG  244 (259)
                      .+|++++++.++...  .....|+.+++.+|
T Consensus       228 v~D~a~a~~~~~~~~~~~~~~~~~~yni~s~  258 (349)
T TIGR02622       228 VLEPLSGYLLLAEKLFTGQAEFAGAWNFGPR  258 (349)
T ss_pred             HHHHHHHHHHHHHHHhhcCccccceeeeCCC
Confidence            889999988776421  11123678999875

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.92  E-value=2.2e-24  Score=170.48  Aligned_cols=191  Identities=22%  Similarity=0.223  Sum_probs=166.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-----EEEEeeCChhHHHHHHHHHHhcC----CcEEEEEecCCCHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-----IVHTCSRNQIELDARLHEWKNKG----FKVTGSVCDLSSREQREKLIETV   71 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-----~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~   71 (259)
                      |++||||++||||.+++++|.+...     +++++.|+.++.++.++.+.+..    ..+.++.+|+++..++.++.+++
T Consensus         4 KvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~di   83 (341)
T KOG1478|consen    4 KVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKDI   83 (341)
T ss_pred             eEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHHH
Confidence            7899999999999999999998743     57888999999999999998653    46889999999999999999999


Q ss_pred             HHHcCCCccEEEEcCCCCCCCCCC---------------------------CCCHHHHHHHHHHhhHhHHHHHHHHHHHh
Q 024994           72 TSIFQGKLNILINNAAIAFVKPTV---------------------------DITAEDMSTVSSTNFESVFHLSQLAHPLF  124 (259)
Q Consensus        72 ~~~~~~~id~vi~~ag~~~~~~~~---------------------------~~~~~~~~~~~~~n~~~~~~~~~~~~~~~  124 (259)
                      .++| .++|+++.|||.+....+.                           ..+.+++...|+.|++|++.+.+.+.|++
T Consensus        84 ~~rf-~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll  162 (341)
T KOG1478|consen   84 KQRF-QRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLL  162 (341)
T ss_pred             HHHh-hhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHh
Confidence            9999 6999999999987432211                           12567889999999999999999999999


Q ss_pred             HhCCCCEEEEecCCCccCC---------CCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCc
Q 024994          125 KASGNGSIVFISSVGGVRG---------IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE  192 (259)
Q Consensus       125 ~~~~~~~ii~isS~~~~~~---------~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~  192 (259)
                      ....++.+|++||..+...         +.+..+|..||.+.+.+.-++.+.+.+.|+....++||...|.+.....
T Consensus       163 ~~~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~~~~~~l  239 (341)
T KOG1478|consen  163 CHSDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTNSFSEYL  239 (341)
T ss_pred             hcCCCCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecchhhhhh
Confidence            8888889999999877532         4567899999999999999999999999999999999999998876543

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.91  E-value=7.9e-23  Score=160.90  Aligned_cols=173  Identities=21%  Similarity=0.323  Sum_probs=139.5

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCCh---hHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024994            2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQ---IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG   77 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (259)
                      ++|||||.||||..++++|+++|. +|++++|+.   ...++..+++.+.+.++.++++|++|+++++++++++.+.+ +
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~-~   80 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRF-G   80 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTS-S
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhcc-C
Confidence            789999999999999999999986 899999993   24556788888888899999999999999999999999988 7


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHH
Q 024994           78 KLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAM  157 (259)
Q Consensus        78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~  157 (259)
                      +++.|||+||.....++.+.+.++++.++...+.+...+.+.+    ...+...+|++||.++..+.++...|+++.+.+
T Consensus        81 ~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~----~~~~l~~~i~~SSis~~~G~~gq~~YaaAN~~l  156 (181)
T PF08659_consen   81 PIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEAL----ENRPLDFFILFSSISSLLGGPGQSAYAAANAFL  156 (181)
T ss_dssp             -EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHH----TTTTTSEEEEEEEHHHHTT-TTBHHHHHHHHHH
T ss_pred             CcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHh----hcCCCCeEEEECChhHhccCcchHhHHHHHHHH
Confidence            9999999999988888999999999999999999999998887    445568999999999999999999999999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEeCCce
Q 024994          158 NQLTKNLACEWAKDNIRTNTVAPWVI  183 (259)
Q Consensus       158 ~~~~~~~a~e~~~~gi~v~~v~pg~v  183 (259)
                      +.|++..+.    .|.++.+|..|..
T Consensus       157 da~a~~~~~----~g~~~~sI~wg~W  178 (181)
T PF08659_consen  157 DALARQRRS----RGLPAVSINWGAW  178 (181)
T ss_dssp             HHHHHHHHH----TTSEEEEEEE-EB
T ss_pred             HHHHHHHHh----CCCCEEEEEcccc
Confidence            999987654    3778888887754

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.91  E-value=5.8e-22  Score=169.84  Aligned_cols=220  Identities=15%  Similarity=0.120  Sum_probs=154.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHH--hcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK--NKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||+|+||.+++++|+++|++|+++.|+.+..+.......  ....++.++.+|++|.++++++++        .
T Consensus         6 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--------~   77 (322)
T PLN02986          6 KLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE--------G   77 (322)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh--------C
Confidence            689999999999999999999999999999998765443322221  112468889999999988887774        5


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCcc-CCCC------------
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV-RGIP------------  145 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~-~~~~------------  145 (259)
                      +|+|||+|+.....     ..+...+++++|+.++..+++++...   .+.++||++||.++. .+.+            
T Consensus        78 ~d~vih~A~~~~~~-----~~~~~~~~~~~nv~gt~~ll~~~~~~---~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~  149 (322)
T PLN02986         78 CDAVFHTASPVFFT-----VKDPQTELIDPALKGTINVLNTCKET---PSVKRVILTSSTAAVLFRQPPIEANDVVDETF  149 (322)
T ss_pred             CCEEEEeCCCcCCC-----CCCchhhhhHHHHHHHHHHHHHHHhc---CCccEEEEecchhheecCCccCCCCCCcCccc
Confidence            89999999964221     11223567899999999999987321   234699999997653 1110            


Q ss_pred             ---------CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCC-----CC
Q 024994          146 ---------SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTP-----IG  211 (259)
Q Consensus       146 ---------~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-----~~  211 (259)
                               +...|+.||.+.+.+++.+.+++   +++++.++|+.+.+|...... ... ......+....+     ..
T Consensus       150 ~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~---~~~~~~lrp~~v~Gp~~~~~~-~~~-~~~~~~~~~g~~~~~~~~~  224 (322)
T PLN02986        150 FSDPSLCRETKNWYPLSKILAENAAWEFAKDN---GIDMVVLNPGFICGPLLQPTL-NFS-VELIVDFINGKNLFNNRFY  224 (322)
T ss_pred             CCChHHhhccccchHHHHHHHHHHHHHHHHHh---CCeEEEEcccceeCCCCCCCC-Ccc-HHHHHHHHcCCCCCCCcCc
Confidence                     13569999999999999887665   899999999999999754211 111 112222222211     12


Q ss_pred             CCCCHHHHHHHHHHHhCCCCCCccccEEEeCCC
Q 024994          212 RAGEPDEVSSLVAFLCLPAASYITGQIICVDGG  244 (259)
Q Consensus       212 ~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG  244 (259)
                      .+..++|++++++..+....  ..| .++++|.
T Consensus       225 ~~v~v~Dva~a~~~al~~~~--~~~-~yni~~~  254 (322)
T PLN02986        225 RFVDVRDVALAHIKALETPS--ANG-RYIIDGP  254 (322)
T ss_pred             ceeEHHHHHHHHHHHhcCcc--cCC-cEEEecC
Confidence            46789999999988886432  234 7888543

>PLN02650 dihydroflavonol-4-reductase

Probab=99.90  E-value=7e-22  Score=171.32  Aligned_cols=209  Identities=18%  Similarity=0.102  Sum_probs=148.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||+|+||.+++++|+++|++|++++|+.+............  ..++.++.+|++|.+.++++++        .
T Consensus         6 k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~--------~   77 (351)
T PLN02650          6 ETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR--------G   77 (351)
T ss_pred             CEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh--------C
Confidence            68999999999999999999999999999999876554433222111  2358889999999988877764        5


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCC----C---------
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI----P---------  145 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~----~---------  145 (259)
                      +|+|||+|+....   ..  .+.+++.+++|+.+++.+++++.+..   ..++||++||.....+.    +         
T Consensus        78 ~d~ViH~A~~~~~---~~--~~~~~~~~~~Nv~gt~~ll~aa~~~~---~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~  149 (351)
T PLN02650         78 CTGVFHVATPMDF---ES--KDPENEVIKPTVNGMLSIMKACAKAK---TVRRIVFTSSAGTVNVEEHQKPVYDEDCWSD  149 (351)
T ss_pred             CCEEEEeCCCCCC---CC--CCchhhhhhHHHHHHHHHHHHHHhcC---CceEEEEecchhhcccCCCCCCccCcccCCc
Confidence            8999999986421   11  12235678899999999999985331   13699999997543211    0         


Q ss_pred             ---------CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhc------CCC
Q 024994          146 ---------SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQ------TPI  210 (259)
Q Consensus       146 ---------~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~  210 (259)
                               +...|+.||.+.+.+++.++.++   |++++.++|+++++|........... .........      ...
T Consensus       150 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRp~~v~Gp~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  225 (351)
T PLN02650        150 LDFCRRKKMTGWMYFVSKTLAEKAAWKYAAEN---GLDFISIIPTLVVGPFISTSMPPSLI-TALSLITGNEAHYSIIKQ  225 (351)
T ss_pred             hhhhhccccccchHHHHHHHHHHHHHHHHHHc---CCeEEEECCCceECCCCCCCCCccHH-HHHHHhcCCccccCcCCC
Confidence                     12379999999999999997764   89999999999999976432111110 000101111      112


Q ss_pred             CCCCCHHHHHHHHHHHhCC
Q 024994          211 GRAGEPDEVSSLVAFLCLP  229 (259)
Q Consensus       211 ~~~~~~~~va~~~~~l~~~  229 (259)
                      ..+..++|++++++.++..
T Consensus       226 r~~v~V~Dva~a~~~~l~~  244 (351)
T PLN02650        226 GQFVHLDDLCNAHIFLFEH  244 (351)
T ss_pred             cceeeHHHHHHHHHHHhcC
Confidence            3577899999999988864

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.90  E-value=7e-22  Score=171.51  Aligned_cols=227  Identities=15%  Similarity=0.086  Sum_probs=160.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEE-EeeCChhH--HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVH-TCSRNQIE--LDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG   77 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~-~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (259)
                      |++|||||+|+||.++++.|+++|+.++ +++|....  .... ..+ ....++.++.+|++|.++++++++.      .
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~------~   73 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSL-APV-AQSERFAFEKVDICDRAELARVFTE------H   73 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhh-hhc-ccCCceEEEECCCcChHHHHHHHhh------c
Confidence            6899999999999999999999998754 45554321  1111 111 1233678889999999998888764      2


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHh-----CCCCEEEEecCCCccC----------
Q 024994           78 KLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKA-----SGNGSIVFISSVGGVR----------  142 (259)
Q Consensus        78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-----~~~~~ii~isS~~~~~----------  142 (259)
                      ++|+|||+||....    +.+.++++..+++|+.+++.+++++.+.+..     .+..++|++||.+.+-          
T Consensus        74 ~~D~Vih~A~~~~~----~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~  149 (355)
T PRK10217         74 QPDCVMHLAAESHV----DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFT  149 (355)
T ss_pred             CCCEEEECCcccCc----chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcC
Confidence            69999999997532    2234567889999999999999999765421     1235899999964321          


Q ss_pred             ---CCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCC---------C
Q 024994          143 ---GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTP---------I  210 (259)
Q Consensus       143 ---~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~---------~  210 (259)
                         +..+...|+.||.+.+.+++.++.++   ++++..++|+.+.+|....   ......+........+         .
T Consensus       150 E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~~---~~~~~~~~~~~~~~~~~~~~g~g~~~  223 (355)
T PRK10217        150 ETTPYAPSSPYSASKASSDHLVRAWLRTY---GLPTLITNCSNNYGPYHFP---EKLIPLMILNALAGKPLPVYGNGQQI  223 (355)
T ss_pred             CCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCeEEEeeeeeeCCCCCc---ccHHHHHHHHHhcCCCceEeCCCCee
Confidence               22346789999999999999998776   7899999999999886421   1111112222222211         1


Q ss_pred             CCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCceee
Q 024994          211 GRAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVT  248 (259)
Q Consensus       211 ~~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~  248 (259)
                      .-+..++|+++++..++...   ..|+++++.+|..++
T Consensus       224 ~~~i~v~D~a~a~~~~~~~~---~~~~~yni~~~~~~s  258 (355)
T PRK10217        224 RDWLYVEDHARALYCVATTG---KVGETYNIGGHNERK  258 (355)
T ss_pred             eCcCcHHHHHHHHHHHHhcC---CCCCeEEeCCCCccc
Confidence            12567899999988777532   357899999997654

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.90  E-value=8.6e-22  Score=170.03  Aligned_cols=232  Identities=16%  Similarity=0.021  Sum_probs=152.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhH-----HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE-----LDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIF   75 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (259)
                      |++|||||+|+||.+++++|+++|++|++++|+.+.     ++....+....+.++.++.+|++|.+++.++++..    
T Consensus         7 ~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----   82 (340)
T PLN02653          7 KVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI----   82 (340)
T ss_pred             CEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc----
Confidence            689999999999999999999999999999987543     22111111111346889999999999998888753    


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccC----------CC
Q 024994           76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVR----------GI  144 (259)
Q Consensus        76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~----------~~  144 (259)
                        .+|+|||+|+.....    ...++.+..+++|+.++..+++++.+...+++ ..++|++||.+.+-          +.
T Consensus        83 --~~d~Vih~A~~~~~~----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~E~~~~  156 (340)
T PLN02653         83 --KPDEVYNLAAQSHVA----VSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQSETTPF  156 (340)
T ss_pred             --CCCEEEECCcccchh----hhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCCCCCCCC
Confidence              589999999975432    22344567788999999999999977654321 12788888753221          12


Q ss_pred             CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcC--C--------CCCCC
Q 024994          145 PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQT--P--------IGRAG  214 (259)
Q Consensus       145 ~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~--------~~~~~  214 (259)
                      .+...|+.||.+.+.++++++.++   ++.+....+..+..|......................  +        ..-+.
T Consensus       157 ~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i  233 (340)
T PLN02653        157 HPRSPYAVAKVAAHWYTVNYREAY---GLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWG  233 (340)
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHc---CCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecce
Confidence            246689999999999999998876   4444433333333332111000000001111111111  1        12356


Q ss_pred             CHHHHHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          215 EPDEVSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       215 ~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      ..+|++++++.++...    .+..+++.+|...++
T Consensus       234 ~v~D~a~a~~~~~~~~----~~~~yni~~g~~~s~  264 (340)
T PLN02653        234 FAGDYVEAMWLMLQQE----KPDDYVVATEESHTV  264 (340)
T ss_pred             eHHHHHHHHHHHHhcC----CCCcEEecCCCceeH
Confidence            7999999999888632    246799998876654

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.89  E-value=3.2e-21  Score=171.46  Aligned_cols=227  Identities=15%  Similarity=0.117  Sum_probs=155.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChh---H----H---------HHHHHHHH-hcCCcEEEEEecCCCHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI---E----L---------DARLHEWK-NKGFKVTGSVCDLSSREQ   63 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~---~----~---------~~~~~~~~-~~~~~~~~~~~D~~~~~~   63 (259)
                      |++|||||+|+||++++++|+++|++|++++|...   .    .         .+.++.+. ..+.++.++.+|++|.+.
T Consensus        48 k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d~~~  127 (442)
T PLN02572         48 KKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICDFEF  127 (442)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCCHHH
Confidence            68999999999999999999999999999874221   0    0         01111111 113368899999999999


Q ss_pred             HHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCC-CEEEEecCCCccC
Q 024994           64 REKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGN-GSIVFISSVGGVR  142 (259)
Q Consensus        64 ~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~ii~isS~~~~~  142 (259)
                      +.+++++.      ++|+|||+|+... .+....++++++..+++|+.+++++++++.    +.+. .++|++||...+-
T Consensus       128 v~~~l~~~------~~D~ViHlAa~~~-~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~----~~gv~~~~V~~SS~~vYG  196 (442)
T PLN02572        128 LSEAFKSF------EPDAVVHFGEQRS-APYSMIDRSRAVFTQHNNVIGTLNVLFAIK----EFAPDCHLVKLGTMGEYG  196 (442)
T ss_pred             HHHHHHhC------CCCEEEECCCccc-ChhhhcChhhHHHHHHHHHHHHHHHHHHHH----HhCCCccEEEEecceecC
Confidence            98888752      6999999997643 233344566778889999999999999884    3333 4899999975431


Q ss_pred             ------------------------CCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcC-----
Q 024994          143 ------------------------GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE-----  193 (259)
Q Consensus       143 ------------------------~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~-----  193 (259)
                                              +..+...|+.||.+.+.+++.++..+   |+++..++|+.+++|.......     
T Consensus       197 ~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~---gl~~v~lR~~~vyGp~~~~~~~~~~li  273 (442)
T PLN02572        197 TPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETMMDEELI  273 (442)
T ss_pred             CCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhc---CCCEEEEecccccCCCCcccccccccc
Confidence                                    11234579999999999999887665   8999999999999987542100     


Q ss_pred             -----C----CCchHHHHhhhhcCCC---------CCCCCHHHHHHHHHHHhCCCCCCccc--cEEEeCC
Q 024994          194 -----G----PEGSEFLDGIARQTPI---------GRAGEPDEVSSLVAFLCLPAASYITG--QIICVDG  243 (259)
Q Consensus       194 -----~----~~~~~~~~~~~~~~~~---------~~~~~~~~va~~~~~l~~~~~~~~~G--~~l~~dg  243 (259)
                           .    .....+........++         .-+..++|++++++.++....  ..|  .++++.+
T Consensus       274 ~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~--~~g~~~i~Nigs  341 (442)
T PLN02572        274 NRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPA--KPGEFRVFNQFT  341 (442)
T ss_pred             cccCcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChh--hcCceeEEEeCC
Confidence                 0    0011112222222221         135678999999988875321  234  4688854

>PLN02214 cinnamoyl-CoA reductase

Probab=99.89  E-value=3.9e-21  Score=166.00  Aligned_cols=216  Identities=16%  Similarity=0.093  Sum_probs=152.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHH-HHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDA-RLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||+|+||++++++|+++|++|++++|+.+.... ...++.....++.++.+|++|.+++.++++        .+
T Consensus        11 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--------~~   82 (342)
T PLN02214         11 KTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAID--------GC   82 (342)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHh--------cC
Confidence            689999999999999999999999999999998764322 122332223368889999999998887774        58


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCC----C----------
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI----P----------  145 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~----~----------  145 (259)
                      |+|||+|+...         +++++.+++|+.++..+++++.    +.+.++||++||..+.++.    +          
T Consensus        83 d~Vih~A~~~~---------~~~~~~~~~nv~gt~~ll~aa~----~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~  149 (342)
T PLN02214         83 DGVFHTASPVT---------DDPEQMVEPAVNGAKFVINAAA----EAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWS  149 (342)
T ss_pred             CEEEEecCCCC---------CCHHHHHHHHHHHHHHHHHHHH----hcCCCEEEEeccceeeeccCCCCCCcccCcccCC
Confidence            99999999631         1356788999999999999883    4445799999997544321    0          


Q ss_pred             -------CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCC-----CCCC
Q 024994          146 -------SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTP-----IGRA  213 (259)
Q Consensus       146 -------~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~  213 (259)
                             +...|+.||.+.+.+++.++.++   |++++.++|+.+++|...... ...............+     ..-+
T Consensus       150 ~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---g~~~v~lRp~~vyGp~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~  225 (342)
T PLN02214        150 DLDFCKNTKNWYCYGKMVAEQAAWETAKEK---GVDLVVLNPVLVLGPPLQPTI-NASLYHVLKYLTGSAKTYANLTQAY  225 (342)
T ss_pred             ChhhccccccHHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCceECCCCCCCC-CchHHHHHHHHcCCcccCCCCCcCe
Confidence                   23479999999999999887765   899999999999999653211 1111111111111111     1235


Q ss_pred             CCHHHHHHHHHHHhCCCCCCccccEEEeCCC
Q 024994          214 GEPDEVSSLVAFLCLPAASYITGQIICVDGG  244 (259)
Q Consensus       214 ~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG  244 (259)
                      ..++|++++++.++...  . .|..+++.++
T Consensus       226 i~V~Dva~a~~~al~~~--~-~~g~yn~~~~  253 (342)
T PLN02214        226 VDVRDVALAHVLVYEAP--S-ASGRYLLAES  253 (342)
T ss_pred             eEHHHHHHHHHHHHhCc--c-cCCcEEEecC
Confidence            67999999998877532  1 2345667543

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.89  E-value=1.7e-21  Score=157.83  Aligned_cols=223  Identities=16%  Similarity=0.110  Sum_probs=167.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC--EEEEeeCChhH--HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIE--LDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ   76 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~--~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (259)
                      |++|||||.|+||.++++++.++..  .|+.++.-.-.  .+. +..+.+ ..+..|+++|+.|.+.+.+++++      
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~-l~~~~~-~~~~~fv~~DI~D~~~v~~~~~~------   72 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLEN-LADVED-SPRYRFVQGDICDRELVDRLFKE------   72 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHH-HHhhhc-CCCceEEeccccCHHHHHHHHHh------
Confidence            6899999999999999999999864  47888764322  222 223322 45899999999999999988875      


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCc--c-----------CC
Q 024994           77 GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG--V-----------RG  143 (259)
Q Consensus        77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~--~-----------~~  143 (259)
                      .++|+|+|-|+-.+..    -+.++.+..+++|+.|++.+++++..+...   -+++.||.--.  .           .|
T Consensus        73 ~~~D~VvhfAAESHVD----RSI~~P~~Fi~TNv~GT~~LLEaar~~~~~---frf~HISTDEVYG~l~~~~~~FtE~tp  145 (340)
T COG1088          73 YQPDAVVHFAAESHVD----RSIDGPAPFIQTNVVGTYTLLEAARKYWGK---FRFHHISTDEVYGDLGLDDDAFTETTP  145 (340)
T ss_pred             cCCCeEEEechhcccc----ccccChhhhhhcchHHHHHHHHHHHHhccc---ceEEEeccccccccccCCCCCcccCCC
Confidence            3799999999976543    356667778899999999999999544321   58999998421  1           24


Q ss_pred             CCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCC---------C
Q 024994          144 IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRA---------G  214 (259)
Q Consensus       144 ~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~  214 (259)
                      ..+.++|++|||+.+.|+|++.+.|   |+.++..+|.+-++|.+.....   .+..........|+..+         .
T Consensus       146 ~~PsSPYSASKAasD~lVray~~TY---glp~~ItrcSNNYGPyqfpEKl---IP~~I~nal~g~~lpvYGdG~~iRDWl  219 (340)
T COG1088         146 YNPSSPYSASKAASDLLVRAYVRTY---GLPATITRCSNNYGPYQFPEKL---IPLMIINALLGKPLPVYGDGLQIRDWL  219 (340)
T ss_pred             CCCCCCcchhhhhHHHHHHHHHHHc---CCceEEecCCCCcCCCcCchhh---hHHHHHHHHcCCCCceecCCcceeeeE
Confidence            5578899999999999999998887   9999999999999998754321   22244555555554433         3


Q ss_pred             CHHHHHHHHHHHhCCCCCCccccEEEeCCCcee
Q 024994          215 EPDEVSSLVAFLCLPAASYITGQIICVDGGVTV  247 (259)
Q Consensus       215 ~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~  247 (259)
                      .++|-+.++..++...   ..|++++++||...
T Consensus       220 ~VeDh~~ai~~Vl~kg---~~GE~YNIgg~~E~  249 (340)
T COG1088         220 YVEDHCRAIDLVLTKG---KIGETYNIGGGNER  249 (340)
T ss_pred             EeHhHHHHHHHHHhcC---cCCceEEeCCCccc
Confidence            4789999988777532   34999999999654

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.89  E-value=7.9e-21  Score=164.87  Aligned_cols=213  Identities=19%  Similarity=0.125  Sum_probs=150.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+|+||.+++++|+++|++|++++|+.++.+.....+.. +.++.++.+|+++.+++.++++        .+|
T Consensus        11 ~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~--------~~d   81 (353)
T PLN02896         11 GTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE-GDRLRLFRADLQEEGSFDEAVK--------GCD   81 (353)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc-CCeEEEEECCCCCHHHHHHHHc--------CCC
Confidence            6899999999999999999999999999999987766555444432 3568899999999988877763        589


Q ss_pred             EEEEcCCCCCCCC-CCCCCHHHH--HHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCC-------------
Q 024994           81 ILINNAAIAFVKP-TVDITAEDM--STVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI-------------  144 (259)
Q Consensus        81 ~vi~~ag~~~~~~-~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~-------------  144 (259)
                      +|||+|+...... ....+.+.+  ..+++.|+.+++.+++++.+..   ..++||++||.+.+...             
T Consensus        82 ~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~---~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~  158 (353)
T PLN02896         82 GVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK---TVKRVVFTSSISTLTAKDSNGRWRAVVDET  158 (353)
T ss_pred             EEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC---CccEEEEEechhhccccccCCCCCCccCcc
Confidence            9999999764332 122233333  4567888899999999884331   24699999997554211             


Q ss_pred             ------------CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCC---
Q 024994          145 ------------PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTP---  209 (259)
Q Consensus       145 ------------~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~---  209 (259)
                                  ++...|+.||.+.+.+++.++.++   +++++.++|+.+++|....... .........+.....   
T Consensus       159 ~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~-~~~~~~~~~~~g~~~~~~  234 (353)
T PLN02896        159 CQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKEN---GIDLVSVITTTVAGPFLTPSVP-SSIQVLLSPITGDSKLFS  234 (353)
T ss_pred             cCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCcCCCCC-chHHHHHHHhcCCccccc
Confidence                        011379999999999999987765   8999999999999997543211 100001111101110   


Q ss_pred             ----------CCCCCCHHHHHHHHHHHhCC
Q 024994          210 ----------IGRAGEPDEVSSLVAFLCLP  229 (259)
Q Consensus       210 ----------~~~~~~~~~va~~~~~l~~~  229 (259)
                                ..-+..++|++++++.++..
T Consensus       235 ~~~~~~~~~~~~dfi~v~Dva~a~~~~l~~  264 (353)
T PLN02896        235 ILSAVNSRMGSIALVHIEDICDAHIFLMEQ  264 (353)
T ss_pred             cccccccccCceeEEeHHHHHHHHHHHHhC
Confidence                      01256899999999888853

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.89  E-value=3.1e-21  Score=164.46  Aligned_cols=188  Identities=16%  Similarity=0.076  Sum_probs=144.8

Q ss_pred             CEEEEEcCcchHHHH--HHHHHHHCCCEEEEeeCChhHH------------HHHHHHHHhcCCcEEEEEecCCCHHHHHH
Q 024994            1 MTALVTGGTRGIGHA--TVEELARFGAIVHTCSRNQIEL------------DARLHEWKNKGFKVTGSVCDLSSREQREK   66 (259)
Q Consensus         1 k~~lItG~s~giG~~--~a~~l~~~G~~V~~~~r~~~~~------------~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   66 (259)
                      |++||||+++|||.+  +|+.| ++|++|+++++..+..            +.+.+.+...+..+..+.+|+++.+++++
T Consensus        42 K~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v~~  120 (398)
T PRK13656         42 KKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIKQK  120 (398)
T ss_pred             CEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence            799999999999999  89999 9999998888543221            12333444445567889999999999999


Q ss_pred             HHHHHHHHcCCCccEEEEcCCCCCCCC-----------------C-----------------CCCCHHHHHHHHHHhhH-
Q 024994           67 LIETVTSIFQGKLNILINNAAIAFVKP-----------------T-----------------VDITAEDMSTVSSTNFE-  111 (259)
Q Consensus        67 ~~~~~~~~~~~~id~vi~~ag~~~~~~-----------------~-----------------~~~~~~~~~~~~~~n~~-  111 (259)
                      +++++.+.+ |++|+||||++......                 +                 ...+.++++.++++.=. 
T Consensus       121 lie~I~e~~-G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv~vMgge  199 (398)
T PRK13656        121 VIELIKQDL-GQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTVKVMGGE  199 (398)
T ss_pred             HHHHHHHhc-CCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHHHhhccc
Confidence            999999999 79999999999863211                 1                 12455666655544322 


Q ss_pred             hHHHHHHHH--HHHhHhCCCCEEEEecCCCccCCCCCC--hhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCC
Q 024994          112 SVFHLSQLA--HPLFKASGNGSIVFISSVGGVRGIPSV--SLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM  187 (259)
Q Consensus       112 ~~~~~~~~~--~~~~~~~~~~~ii~isS~~~~~~~~~~--~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~  187 (259)
                      .-..+++++  .+.|  ..+++++-.|..+.....|.+  ...+.+|++|+.-++.|+.+|++.|+|+|++.+|++.|.-
T Consensus       200 dw~~Wi~al~~a~ll--a~g~~~va~TY~G~~~t~p~Y~~g~mG~AKa~LE~~~r~La~~L~~~giran~i~~g~~~T~A  277 (398)
T PRK13656        200 DWELWIDALDEAGVL--AEGAKTVAYSYIGPELTHPIYWDGTIGKAKKDLDRTALALNEKLAAKGGDAYVSVLKAVVTQA  277 (398)
T ss_pred             hHHHHHHHHHhcccc--cCCcEEEEEecCCcceeecccCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchh
Confidence            223444433  4444  346899999998888777766  5889999999999999999999999999999999999988


Q ss_pred             CCCCc
Q 024994          188 IKPFE  192 (259)
Q Consensus       188 ~~~~~  192 (259)
                      ....+
T Consensus       278 ss~Ip  282 (398)
T PRK13656        278 SSAIP  282 (398)
T ss_pred             hhcCC
Confidence            76553

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.89  E-value=6.4e-21  Score=165.11  Aligned_cols=230  Identities=14%  Similarity=0.114  Sum_probs=159.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHh-----cCCcEEEEEecCCCHHHHHHHHHHHHHHc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKN-----KGFKVTGSVCDLSSREQREKLIETVTSIF   75 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (259)
                      |++|||||+|.||.+++++|.++|++|++++|..............     ...++.++.+|+.|.+.+.++++      
T Consensus        16 ~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~------   89 (348)
T PRK15181         16 KRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK------   89 (348)
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh------
Confidence            6899999999999999999999999999999865432222221111     11357889999999888777664      


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCC-----------C
Q 024994           76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-----------I  144 (259)
Q Consensus        76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~-----------~  144 (259)
                        .+|+|||+|+......    ..++....+++|+.++..+++++    ++.+..++|++||...+-.           .
T Consensus        90 --~~d~ViHlAa~~~~~~----~~~~~~~~~~~Nv~gt~nll~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~  159 (348)
T PRK15181         90 --NVDYVLHQAALGSVPR----SLKDPIATNSANIDGFLNMLTAA----RDAHVSSFTYAASSSTYGDHPDLPKIEERIG  159 (348)
T ss_pred             --CCCEEEECccccCchh----hhhCHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEeechHhhCCCCCCCCCCCCCC
Confidence              5899999999753211    22334567889999999999887    4555579999998753321           1


Q ss_pred             CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCC-cCCCCchHHHHhhhhcCCC---C------CCC
Q 024994          145 PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF-EEGPEGSEFLDGIARQTPI---G------RAG  214 (259)
Q Consensus       145 ~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~---~------~~~  214 (259)
                      .+...|+.||.+.+.+++.++..+   ++++..++|+.+++|..... ........+........+.   +      -+.
T Consensus       160 ~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i  236 (348)
T PRK15181        160 RPLSPYAVTKYVNELYADVFARSY---EFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFC  236 (348)
T ss_pred             CCCChhhHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeE
Confidence            134579999999999999886664   89999999999999865321 1111112233333322221   1      135


Q ss_pred             CHHHHHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          215 EPDEVSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       215 ~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      ..+|++++++..+........|+++++.+|...++
T Consensus       237 ~v~D~a~a~~~~~~~~~~~~~~~~yni~~g~~~s~  271 (348)
T PRK15181        237 YIENVIQANLLSATTNDLASKNKVYNVAVGDRTSL  271 (348)
T ss_pred             EHHHHHHHHHHHHhcccccCCCCEEEecCCCcEeH
Confidence            68999999876664322234688999998876654

>PLN02583 cinnamoyl-CoA reductase

Probab=99.89  E-value=8e-21  Score=161.02  Aligned_cols=215  Identities=11%  Similarity=-0.002  Sum_probs=149.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhH--HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE--LDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||+|+||++++++|+++|++|++++|+.+.  ......++...+.++.++++|++|.+++.+++        ..
T Consensus         7 k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l--------~~   78 (297)
T PLN02583          7 KSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDAL--------KG   78 (297)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHH--------cC
Confidence            689999999999999999999999999999986432  22223333222346888999999998887665        35


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCC---C---------C
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI---P---------S  146 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~---~---------~  146 (259)
                      .|.++|.++...     +.. .++++++++|+.+++.+++++.+.+   +.++||++||.++....   +         .
T Consensus        79 ~d~v~~~~~~~~-----~~~-~~~~~~~~~nv~gt~~ll~aa~~~~---~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~  149 (297)
T PLN02583         79 CSGLFCCFDPPS-----DYP-SYDEKMVDVEVRAAHNVLEACAQTD---TIEKVVFTSSLTAVIWRDDNISTQKDVDERS  149 (297)
T ss_pred             CCEEEEeCccCC-----ccc-ccHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEecchHheecccccCCCCCCCCccc
Confidence            889998765321     111 2467899999999999999986543   24799999998654211   0         0


Q ss_pred             C----------hhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCC--CCCCC
Q 024994          147 V----------SLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTP--IGRAG  214 (259)
Q Consensus       147 ~----------~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  214 (259)
                      +          ..|+.||...+.++..++...   |++++.++|+++.+|.......      .........+  ...+.
T Consensus       150 ~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~~---gi~~v~lrp~~v~Gp~~~~~~~------~~~~~~~~~~~~~~~~v  220 (297)
T PLN02583        150 WSDQNFCRKFKLWHALAKTLSEKTAWALAMDR---GVNMVSINAGLLMGPSLTQHNP------YLKGAAQMYENGVLVTV  220 (297)
T ss_pred             CCCHHHHhhcccHHHHHHHHHHHHHHHHHHHh---CCcEEEEcCCcccCCCCCCchh------hhcCCcccCcccCcceE
Confidence            1          159999999999998886554   8999999999999987532110      0110000111  11367


Q ss_pred             CHHHHHHHHHHHhCCCCCCccccEEEeCCC
Q 024994          215 EPDEVSSLVAFLCLPAASYITGQIICVDGG  244 (259)
Q Consensus       215 ~~~~va~~~~~l~~~~~~~~~G~~l~~dgG  244 (259)
                      +++|++++++..+...  ...| .+.+.++
T Consensus       221 ~V~Dva~a~~~al~~~--~~~~-r~~~~~~  247 (297)
T PLN02583        221 DVNFLVDAHIRAFEDV--SSYG-RYLCFNH  247 (297)
T ss_pred             EHHHHHHHHHHHhcCc--ccCC-cEEEecC
Confidence            8999999998888532  2344 4555555

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.88  E-value=8.7e-21  Score=163.95  Aligned_cols=231  Identities=16%  Similarity=0.033  Sum_probs=152.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhH-----HHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE-----LDARLHEWKN-KGFKVTGSVCDLSSREQREKLIETVTSI   74 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~   74 (259)
                      |++|||||+|+||.+++++|+++|++|++++|+.+.     ++....+... .+.++.++++|++|.+++.++++..   
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~---   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI---   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC---
Confidence            799999999999999999999999999999987642     2111111100 1235889999999999988888753   


Q ss_pred             cCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccC-----------C
Q 024994           75 FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR-----------G  143 (259)
Q Consensus        75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~-----------~  143 (259)
                         ++|+|||+|+......    ..+.....+++|+.++..+++++.+.-.+ +..++|++||...+-           +
T Consensus        78 ---~~d~ViH~Aa~~~~~~----~~~~~~~~~~~n~~gt~~ll~a~~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~E~~~  149 (343)
T TIGR01472        78 ---KPTEIYNLAAQSHVKV----SFEIPEYTADVDGIGTLRLLEAVRTLGLI-KSVKFYQASTSELYGKVQEIPQNETTP  149 (343)
T ss_pred             ---CCCEEEECCcccccch----hhhChHHHHHHHHHHHHHHHHHHHHhCCC-cCeeEEEeccHHhhCCCCCCCCCCCCC
Confidence               5899999999754321    22233567789999999999998543111 124899999964321           2


Q ss_pred             CCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhc----------CCCCCC
Q 024994          144 IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQ----------TPIGRA  213 (259)
Q Consensus       144 ~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~  213 (259)
                      ..+...|+.||.+.+.+++.++.++   ++++....+..+.+|.................+...          ....-+
T Consensus       150 ~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~  226 (343)
T TIGR01472       150 FYPRSPYAAAKLYAHWITVNYREAY---GLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDW  226 (343)
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHh---CCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCc
Confidence            2345789999999999999998776   555555555445444321100000001111222111          111235


Q ss_pred             CCHHHHHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          214 GEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       214 ~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      ...+|++++++.++...    .+..+++.+|...++
T Consensus       227 i~V~D~a~a~~~~~~~~----~~~~yni~~g~~~s~  258 (343)
T TIGR01472       227 GHAKDYVEAMWLMLQQD----KPDDYVIATGETHSV  258 (343)
T ss_pred             eeHHHHHHHHHHHHhcC----CCccEEecCCCceeH
Confidence            67899999998777532    235799998877654

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.88  E-value=1.2e-20  Score=162.66  Aligned_cols=207  Identities=17%  Similarity=0.100  Sum_probs=145.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHH--HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARL--HEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~--~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||+|+||++++++|+++|++|+++.|+.+......  ..+.. ..++.++.+|++|.+++.++++        +
T Consensus        10 ~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~--------~   80 (338)
T PLN00198         10 KTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQE-LGDLKIFGADLTDEESFEAPIA--------G   80 (338)
T ss_pred             CeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCC-CCceEEEEcCCCChHHHHHHHh--------c
Confidence            68999999999999999999999999999888765433221  11111 1257889999999988777663        5


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCC---------------
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG---------------  143 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~---------------  143 (259)
                      +|+|||+|+...   ..  ..+.....+++|+.++..+++++...   .+.++||++||.+.+..               
T Consensus        81 ~d~vih~A~~~~---~~--~~~~~~~~~~~nv~g~~~ll~a~~~~---~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~  152 (338)
T PLN00198         81 CDLVFHVATPVN---FA--SEDPENDMIKPAIQGVHNVLKACAKA---KSVKRVILTSSAAAVSINKLSGTGLVMNEKNW  152 (338)
T ss_pred             CCEEEEeCCCCc---cC--CCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeecceeeeccCCCCCCceeccccC
Confidence            899999999531   11  12234567889999999999988432   23579999999765431               


Q ss_pred             ---------CCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcC------
Q 024994          144 ---------IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQT------  208 (259)
Q Consensus       144 ---------~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~------  208 (259)
                               .++...|+.||.+.+.+++.++.++   |++++.++|+.+++|.......  ..-..........      
T Consensus       153 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~~R~~~vyGp~~~~~~~--~~~~~~~~~~~~~~~~~~g  227 (338)
T PLN00198        153 TDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEEN---NIDLITVIPTLMAGPSLTSDIP--SSLSLAMSLITGNEFLING  227 (338)
T ss_pred             CchhhhhhcCCccchhHHHHHHHHHHHHHHHHhc---CceEEEEeCCceECCCccCCCC--CcHHHHHHHHcCCcccccc
Confidence                     1234569999999999999987664   8999999999999997532111  1000111111111      


Q ss_pred             ----C----CCCCCCHHHHHHHHHHHhCC
Q 024994          209 ----P----IGRAGEPDEVSSLVAFLCLP  229 (259)
Q Consensus       209 ----~----~~~~~~~~~va~~~~~l~~~  229 (259)
                          +    ..-+..++|++++++.++..
T Consensus       228 ~~~~~~~~~~~~~i~V~D~a~a~~~~~~~  256 (338)
T PLN00198        228 LKGMQMLSGSISITHVEDVCRAHIFLAEK  256 (338)
T ss_pred             ccccccccCCcceeEHHHHHHHHHHHhhC
Confidence                1    12467899999999888864

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.88  E-value=2.4e-20  Score=155.43  Aligned_cols=223  Identities=17%  Similarity=0.144  Sum_probs=164.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHH--HHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDA--RLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |+|+||||||.||.+++++|+++||.|..+.|+++..+.  .+.+++....+...+..|++|+++.+++++        +
T Consensus         7 ~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~--------g   78 (327)
T KOG1502|consen    7 KKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID--------G   78 (327)
T ss_pred             cEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh--------C
Confidence            589999999999999999999999999999999987544  356666556679999999999999999986        6


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccCCC-CC----------
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGI-PS----------  146 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~~~-~~----------  146 (259)
                      .|+|||.|........   +  .-.++++..+.|+.++++++    .+.. -.|||++||.++.... +.          
T Consensus        79 cdgVfH~Asp~~~~~~---~--~e~~li~pav~Gt~nVL~ac----~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~  149 (327)
T KOG1502|consen   79 CDGVFHTASPVDFDLE---D--PEKELIDPAVKGTKNVLEAC----KKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEE  149 (327)
T ss_pred             CCEEEEeCccCCCCCC---C--cHHhhhhHHHHHHHHHHHHH----hccCCcceEEEeccHHHhccCCcCCCCCcccccc
Confidence            9999999997644321   1  22368889999999999998    4443 5899999998887543 11          


Q ss_pred             -C----------hhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcC---C-C-
Q 024994          147 -V----------SLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQT---P-I-  210 (259)
Q Consensus       147 -~----------~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~---~-~-  210 (259)
                       |          ..|..||...+..+-.++.+   .|+....|.|+.|-+|..... ...+.......+....   + . 
T Consensus       150 ~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e---~~~~lv~inP~lV~GP~l~~~-l~~s~~~~l~~i~G~~~~~~n~~  225 (327)
T KOG1502|consen  150 SWSDLDFCRCKKLWYALSKTLAEKAAWEFAKE---NGLDLVTINPGLVFGPGLQPS-LNSSLNALLKLIKGLAETYPNFW  225 (327)
T ss_pred             cCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHh---CCccEEEecCCceECCCcccc-cchhHHHHHHHHhcccccCCCCc
Confidence             1          35777887776666666555   379999999999999988762 2222222222222211   1 1 


Q ss_pred             CCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCce
Q 024994          211 GRAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVT  246 (259)
Q Consensus       211 ~~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~  246 (259)
                      -.+.+.+|+|.+.+++++..  .-.|++|.++....
T Consensus       226 ~~~VdVrDVA~AHv~a~E~~--~a~GRyic~~~~~~  259 (327)
T KOG1502|consen  226 LAFVDVRDVALAHVLALEKP--SAKGRYICVGEVVS  259 (327)
T ss_pred             eeeEeHHHHHHHHHHHHcCc--ccCceEEEecCccc
Confidence            12568999999999888644  34688888776654

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.88  E-value=1.6e-20  Score=160.02  Aligned_cols=224  Identities=16%  Similarity=0.089  Sum_probs=157.3

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCC--CEEEEeeCChh-HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            2 TALVTGGTRGIGHATVEELARFG--AIVHTCSRNQI-ELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G--~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      ++|||||+|+||.+++++|+++|  ++|++++|... ...+....+.. ..++.++.+|++|.+++.++++..      +
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~------~   73 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLED-NPRYRFVKGDIGDRELVSRLFTEH------Q   73 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhcc-CCCcEEEEcCCcCHHHHHHHHhhc------C
Confidence            48999999999999999999987  78998886432 11111122221 236788899999999998887642      5


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccC------------CCCC
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR------------GIPS  146 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~------------~~~~  146 (259)
                      +|+|||+|+.....    .+.+.++.++++|+.++..+++++...+   .+.++|++||...+.            +..+
T Consensus        74 ~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~  146 (317)
T TIGR01181        74 PDAVVHFAAESHVD----RSISGPAAFIETNVVGTYTLLEAVRKYW---HEFRFHHISTDEVYGDLEKGDAFTETTPLAP  146 (317)
T ss_pred             CCEEEEcccccCch----hhhhCHHHHHHHHHHHHHHHHHHHHhcC---CCceEEEeeccceeCCCCCCCCcCCCCCCCC
Confidence            99999999975432    2345667889999999999998874332   235899999854321            1123


Q ss_pred             ChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCC---------CCCCHH
Q 024994          147 VSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIG---------RAGEPD  217 (259)
Q Consensus       147 ~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~  217 (259)
                      ...|+.+|.+.+.+++.++.++   ++++..++|+.+.++.....   ..............+..         -+..++
T Consensus       147 ~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~i~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~  220 (317)
T TIGR01181       147 SSPYSASKAASDHLVRAYHRTY---GLPALITRCSNNYGPYQFPE---KLIPLMITNALAGKPLPVYGDGQQVRDWLYVE  220 (317)
T ss_pred             CCchHHHHHHHHHHHHHHHHHh---CCCeEEEEeccccCCCCCcc---cHHHHHHHHHhcCCCceEeCCCceEEeeEEHH
Confidence            4579999999999999987765   89999999999988764321   11111223333322211         244689


Q ss_pred             HHHHHHHHHhCCCCCCccccEEEeCCCceee
Q 024994          218 EVSSLVAFLCLPAASYITGQIICVDGGVTVT  248 (259)
Q Consensus       218 ~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~  248 (259)
                      |+++++..++...   ..|+++++.++..++
T Consensus       221 D~a~~~~~~~~~~---~~~~~~~~~~~~~~s  248 (317)
T TIGR01181       221 DHCRAIYLVLEKG---RVGETYNIGGGNERT  248 (317)
T ss_pred             HHHHHHHHHHcCC---CCCceEEeCCCCcee
Confidence            9999998888532   367899998887655

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.87  E-value=4.8e-20  Score=158.93  Aligned_cols=233  Identities=18%  Similarity=0.117  Sum_probs=157.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||+|+||++++++|+++|++|++++|...........+... +.++.++.+|++|.+++.++++.      .++
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~------~~~   74 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHD------HAI   74 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhc------CCC
Confidence            68999999999999999999999999999886543322222222221 33567889999999988887753      369


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCC-----------C-CCC
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-----------I-PSV  147 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~-----------~-~~~  147 (259)
                      |+|||+|+......    ..+.....+++|+.++..+++++    .+.+.+++|++||...+-.           . .+.
T Consensus        75 d~vvh~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~  146 (338)
T PRK10675         75 DTVIHFAGLKAVGE----SVQKPLEYYDNNVNGTLRLISAM----RAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQ  146 (338)
T ss_pred             CEEEECCccccccc----hhhCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEeccHHhhCCCCCCccccccCCCCCC
Confidence            99999999754322    22334567889999999998876    5555679999999653311           1 236


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCc-CCC--Cch---HHHHhhhh-cC----------C-
Q 024994          148 SLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE-EGP--EGS---EFLDGIAR-QT----------P-  209 (259)
Q Consensus       148 ~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~-~~~--~~~---~~~~~~~~-~~----------~-  209 (259)
                      ..|+.+|.+.+.++++++.+.  .++++..++|+.++++...... ++.  ...   .....+.. ..          + 
T Consensus       147 ~~Y~~sK~~~E~~~~~~~~~~--~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (338)
T PRK10675        147 SPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPT  224 (338)
T ss_pred             ChhHHHHHHHHHHHHHHHHhc--CCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCC
Confidence            789999999999999987653  2688889998888776422111 000  000   11111211 11          1 


Q ss_pred             -CC----CCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          210 -IG----RAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       210 -~~----~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                       .+    -+...+|++++++.++........|+++++.+|..+++
T Consensus       225 ~~g~~~~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~  269 (338)
T PRK10675        225 EDGTGVRDYIHVMDLADGHVAAMEKLANKPGVHIYNLGAGVGSSV  269 (338)
T ss_pred             CCCcEEEeeEEHHHHHHHHHHHHHhhhccCCCceEEecCCCceeH
Confidence             11    25678999999887775322223468999998877654

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.87  E-value=2.8e-20  Score=159.31  Aligned_cols=218  Identities=15%  Similarity=0.134  Sum_probs=149.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHH--hcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK--NKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||+|+||++++++|+++|++|++++|+............  ....++.++++|++|.+.+.++++        +
T Consensus         5 ~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--------~   76 (322)
T PLN02662          5 KVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVD--------G   76 (322)
T ss_pred             CEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHc--------C
Confidence            689999999999999999999999999999988654332211111  112468899999999988777764        5


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCcc-CC-CC-----------
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV-RG-IP-----------  145 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~-~~-~~-----------  145 (259)
                      +|+|||+|+.....  . ..  ..++++++|+.++..+++++...   .+..+||++||.++. ++ .+           
T Consensus        77 ~d~Vih~A~~~~~~--~-~~--~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~  148 (322)
T PLN02662         77 CEGVFHTASPFYHD--V-TD--PQAELIDPAVKGTLNVLRSCAKV---PSVKRVVVTSSMAAVAYNGKPLTPDVVVDETW  148 (322)
T ss_pred             CCEEEEeCCcccCC--C-CC--hHHHHHHHHHHHHHHHHHHHHhC---CCCCEEEEccCHHHhcCCCcCCCCCCcCCccc
Confidence            89999999964211  1 11  12478899999999999988422   135699999997532 21 10           


Q ss_pred             ---C------ChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcC---C--CC
Q 024994          146 ---S------VSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQT---P--IG  211 (259)
Q Consensus       146 ---~------~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~---~--~~  211 (259)
                         +      ...|+.+|.+.+.+++.+..++   +++++.++|+.+++|...... ... ......+....   +  ..
T Consensus       149 ~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lRp~~v~Gp~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~  223 (322)
T PLN02662        149 FSDPAFCEESKLWYVLSKTLAEEAAWKFAKEN---GIDMVTINPAMVIGPLLQPTL-NTS-AEAILNLINGAQTFPNASY  223 (322)
T ss_pred             CCChhHhhcccchHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCcccCCCCCCCC-Cch-HHHHHHHhcCCccCCCCCc
Confidence               1      1479999999999998886654   899999999999999753221 111 11111111111   1  12


Q ss_pred             CCCCHHHHHHHHHHHhCCCCCCccccEEEeC
Q 024994          212 RAGEPDEVSSLVAFLCLPAASYITGQIICVD  242 (259)
Q Consensus       212 ~~~~~~~va~~~~~l~~~~~~~~~G~~l~~d  242 (259)
                      .+..++|++++++.++....  ..|. +++.
T Consensus       224 ~~i~v~Dva~a~~~~~~~~~--~~~~-~~~~  251 (322)
T PLN02662        224 RWVDVRDVANAHIQAFEIPS--ASGR-YCLV  251 (322)
T ss_pred             CeEEHHHHHHHHHHHhcCcC--cCCc-EEEe
Confidence            36789999999988886432  2354 5554

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.87  E-value=2e-20  Score=162.15  Aligned_cols=227  Identities=16%  Similarity=0.113  Sum_probs=157.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCE-EEEeeCChh--HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAI-VHTCSRNQI--ELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG   77 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~-V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (259)
                      |++|||||+|+||.+++++|+++|++ |+.+++...  ..+.. ..+. .+.++.++.+|++|.+++.+++++      .
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~------~   72 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESL-ADVS-DSERYVFEHADICDRAELDRIFAQ------H   72 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHH-Hhcc-cCCceEEEEecCCCHHHHHHHHHh------c
Confidence            58999999999999999999999976 555665321  12221 1111 134578889999999999888864      2


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC-----CCCEEEEecCCCccC----------
Q 024994           78 KLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-----GNGSIVFISSVGGVR----------  142 (259)
Q Consensus        78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~ii~isS~~~~~----------  142 (259)
                      ++|+|||+|+......    +.+..++.+++|+.++..+++++.++|...     +..++|++||...+-          
T Consensus        73 ~~d~vih~A~~~~~~~----~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~  148 (352)
T PRK10084         73 QPDAVMHLAAESHVDR----SITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVEN  148 (352)
T ss_pred             CCCEEEECCcccCCcc----hhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccc
Confidence            6999999999753321    223446789999999999999998765321     235899999964321          


Q ss_pred             -----------CCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCC--
Q 024994          143 -----------GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTP--  209 (259)
Q Consensus       143 -----------~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~--  209 (259)
                                 +..+...|+.||.+.+.+++.++.++   ++++..++|+.+.+|....  . ..............+  
T Consensus       149 ~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~vilr~~~v~Gp~~~~--~-~~~~~~~~~~~~~~~~~  222 (352)
T PRK10084        149 SEELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTY---GLPTIVTNCSNNYGPYHFP--E-KLIPLVILNALEGKPLP  222 (352)
T ss_pred             cccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeccceeCCCcCc--c-chHHHHHHHHhcCCCeE
Confidence                       11235689999999999999998776   7888889999999886321  1 111112222222211  


Q ss_pred             C-------CCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCceee
Q 024994          210 I-------GRAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVT  248 (259)
Q Consensus       210 ~-------~~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~  248 (259)
                      .       .-+..++|+++++..++...   ..|+.+++.++...+
T Consensus       223 ~~~~g~~~~~~v~v~D~a~a~~~~l~~~---~~~~~yni~~~~~~s  265 (352)
T PRK10084        223 IYGKGDQIRDWLYVEDHARALYKVVTEG---KAGETYNIGGHNEKK  265 (352)
T ss_pred             EeCCCCeEEeeEEHHHHHHHHHHHHhcC---CCCceEEeCCCCcCc
Confidence            1       12567899999998777532   357899999887654

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.86  E-value=1.1e-19  Score=159.44  Aligned_cols=223  Identities=23%  Similarity=0.210  Sum_probs=178.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTSIFQG   77 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (259)
                      |++|||||+|.||+++++++++.+. .+++.+|++.++.....++...  ..+..++-+|+.|.+.++++++.      -
T Consensus       251 K~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~------~  324 (588)
T COG1086         251 KTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEG------H  324 (588)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhc------C
Confidence            7999999999999999999999986 7999999999999888888764  46889999999999999999874      3


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHH
Q 024994           78 KLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAM  157 (259)
Q Consensus        78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~  157 (259)
                      ++|+|+|.|+.-+..-.+.    ...+.+.+|++|+.++++++    .+.+-.++|.+|+--+..|   ...|++||...
T Consensus       325 kvd~VfHAAA~KHVPl~E~----nP~Eai~tNV~GT~nv~~aa----~~~~V~~~V~iSTDKAV~P---tNvmGaTKr~a  393 (588)
T COG1086         325 KVDIVFHAAALKHVPLVEY----NPEEAIKTNVLGTENVAEAA----IKNGVKKFVLISTDKAVNP---TNVMGATKRLA  393 (588)
T ss_pred             CCceEEEhhhhccCcchhc----CHHHHHHHhhHhHHHHHHHH----HHhCCCEEEEEecCcccCC---chHhhHHHHHH
Confidence            7999999999866543333    34455669999999999999    5666789999999776554   57899999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCC--------CCCCCHHHHHHHHHHHhCC
Q 024994          158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPI--------GRAGEPDEVSSLVAFLCLP  229 (259)
Q Consensus       158 ~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~va~~~~~l~~~  229 (259)
                      +.++++++......+-++.+|+-|+|-+..-+-.      +.+.+++.+.-|.        ..+.+.+|.++.++.-...
T Consensus       394 E~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSVi------PlFk~QI~~GgplTvTdp~mtRyfMTI~EAv~LVlqA~a~  467 (588)
T COG1086         394 EKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSVI------PLFKKQIAEGGPLTVTDPDMTRFFMTIPEAVQLVLQAGAI  467 (588)
T ss_pred             HHHHHHHhhccCCCCcEEEEEEecceecCCCCCH------HHHHHHHHcCCCccccCCCceeEEEEHHHHHHHHHHHHhh
Confidence            9999999887765578999999999966544322      2366666665443        2245677888877655543


Q ss_pred             CCCCccccEEEeCCCceeee
Q 024994          230 AASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       230 ~~~~~~G~~l~~dgG~~~~~  249 (259)
                         ...|+++.+|=|.+++.
T Consensus       468 ---~~gGeifvldMGepvkI  484 (588)
T COG1086         468 ---AKGGEIFVLDMGEPVKI  484 (588)
T ss_pred             ---cCCCcEEEEcCCCCeEH
Confidence               45899999999988764

>PLN02686 cinnamoyl-CoA reductase

Probab=99.86  E-value=7.7e-20  Score=159.30  Aligned_cols=223  Identities=13%  Similarity=0.043  Sum_probs=150.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhc------CCcEEEEEecCCCHHHHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK------GFKVTGSVCDLSSREQREKLIETVTSI   74 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~~   74 (259)
                      |++|||||+|+||.+++++|+++|++|+++.|+.+..+.+ .++...      ..++.++.+|++|.+++.++++     
T Consensus        54 k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~-----  127 (367)
T PLN02686         54 RLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD-----  127 (367)
T ss_pred             CEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHHHHHHHH-----
Confidence            6899999999999999999999999999988887665443 232211      1357889999999999888775     


Q ss_pred             cCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC-CCCEEEEecCCCc-cC--------C-
Q 024994           75 FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVGG-VR--------G-  143 (259)
Q Consensus        75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~isS~~~-~~--------~-  143 (259)
                         .+|.+||+|+.........    ....+.++|+.++..+++++    .+. +..++|++||..+ .+        + 
T Consensus       128 ---~~d~V~hlA~~~~~~~~~~----~~~~~~~~nv~gt~~llea~----~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~  196 (367)
T PLN02686        128 ---GCAGVFHTSAFVDPAGLSG----YTKSMAELEAKASENVIEAC----VRTESVRKCVFTSSLLACVWRQNYPHDLPP  196 (367)
T ss_pred             ---hccEEEecCeeeccccccc----ccchhhhhhHHHHHHHHHHH----HhcCCccEEEEeccHHHhcccccCCCCCCc
Confidence               4799999998754322111    11244568999999999887    332 3569999999631 11        1 


Q ss_pred             -------------CCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCC-
Q 024994          144 -------------IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTP-  209 (259)
Q Consensus       144 -------------~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-  209 (259)
                                   ..+...|+.||.+.+.+++.++.++   |++++.++|+++++|........ .   .........+ 
T Consensus       197 ~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---gl~~v~lRp~~vyGp~~~~~~~~-~---~~~~~~g~~~~  269 (367)
T PLN02686        197 VIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARGK---GLKLATICPALVTGPGFFRRNST-A---TIAYLKGAQEM  269 (367)
T ss_pred             ccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHhc---CceEEEEcCCceECCCCCCCCCh-h---HHHHhcCCCcc
Confidence                         0123469999999999999887664   89999999999999974321110 0   1111111111 


Q ss_pred             --CC--CCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCceee
Q 024994          210 --IG--RAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVT  248 (259)
Q Consensus       210 --~~--~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~  248 (259)
                        .+  .+.+++|++++++.++........|+.+ +.+|..++
T Consensus       270 ~g~g~~~~v~V~Dva~A~~~al~~~~~~~~~~~y-i~~g~~~s  311 (367)
T PLN02686        270 LADGLLATADVERLAEAHVCVYEAMGNKTAFGRY-ICFDHVVS  311 (367)
T ss_pred             CCCCCcCeEEHHHHHHHHHHHHhccCCCCCCCcE-EEeCCCcc
Confidence              11  2567999999998777532122345556 44454443

>PLN02240 UDP-glucose 4-epimerase

Probab=99.86  E-value=1.8e-19  Score=156.19  Aligned_cols=233  Identities=17%  Similarity=0.140  Sum_probs=157.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHH---HHHHH-hcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDAR---LHEWK-NKGFKVTGSVCDLSSREQREKLIETVTSIFQ   76 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~---~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (259)
                      |++|||||+|+||.+++++|+++|++|++++|........   ..... ....++.++.+|++|.+++.+++++      
T Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~------   79 (352)
T PLN02240          6 RTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAS------   79 (352)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHh------
Confidence            6899999999999999999999999999998754322211   11111 1234678899999999998888764      


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccC-----------CCC
Q 024994           77 GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR-----------GIP  145 (259)
Q Consensus        77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~-----------~~~  145 (259)
                      ..+|+|||+|+.....    .+.+++++.+++|+.++..+++++    .+.+.+++|++||...+-           +..
T Consensus        80 ~~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~  151 (352)
T PLN02240         80 TRFDAVIHFAGLKAVG----ESVAKPLLYYDNNLVGTINLLEVM----AKHGCKKLVFSSSATVYGQPEEVPCTEEFPLS  151 (352)
T ss_pred             CCCCEEEEccccCCcc----ccccCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEccHHHhCCCCCCCCCCCCCCC
Confidence            2699999999975322    133466788999999999998876    444457999999964321           122


Q ss_pred             CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCc-CCC--Cch---HHHHhhhh-cC-CC-------
Q 024994          146 SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE-EGP--EGS---EFLDGIAR-QT-PI-------  210 (259)
Q Consensus       146 ~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~-~~~--~~~---~~~~~~~~-~~-~~-------  210 (259)
                      +...|+.||.+.+.+++.++.+  ..++++..++|+.++.+...... ..+  ...   ........ .. +.       
T Consensus       152 ~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  229 (352)
T PLN02240        152 ATNPYGRTKLFIEEICRDIHAS--DPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDY  229 (352)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHh--cCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCC
Confidence            4578999999999999988755  23688888898877665321110 000  000   11222211 11 11       


Q ss_pred             --------CCCCCHHHHHHHHHHHhCCC--CCCccccEEEeCCCceeee
Q 024994          211 --------GRAGEPDEVSSLVAFLCLPA--ASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       211 --------~~~~~~~~va~~~~~l~~~~--~~~~~G~~l~~dgG~~~~~  249 (259)
                              .-+..++|++++++.++...  .....|+++++.+|..++.
T Consensus       230 ~~~~g~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~  278 (352)
T PLN02240        230 PTKDGTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSV  278 (352)
T ss_pred             CCCCCCEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeH
Confidence                    12356899999887766421  1224578999998887654

>PLN02427 UDP-apiose/xylose synthase

Probab=99.85  E-value=1.6e-19  Score=158.44  Aligned_cols=227  Identities=16%  Similarity=0.131  Sum_probs=152.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHC-CCEEEEeeCChhHHHHHHHHHH-hcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARF-GAIVHTCSRNQIELDARLHEWK-NKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |+||||||+|+||.+++++|+++ |++|++++|+.++...+..... ....++.++.+|++|.+.+.++++        .
T Consensus        15 ~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~--------~   86 (386)
T PLN02427         15 LTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIK--------M   86 (386)
T ss_pred             cEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhh--------c
Confidence            68999999999999999999998 5999999988665433221100 012368899999999988877764        4


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCC---------C----
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI---------P----  145 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~---------~----  145 (259)
                      +|+|||+|+.........    +-.+.+..|+.++..+++++    .+.+ .++|++||...+-..         |    
T Consensus        87 ~d~ViHlAa~~~~~~~~~----~~~~~~~~n~~gt~~ll~aa----~~~~-~r~v~~SS~~vYg~~~~~~~~e~~p~~~~  157 (386)
T PLN02427         87 ADLTINLAAICTPADYNT----RPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDHPLRQD  157 (386)
T ss_pred             CCEEEEcccccChhhhhh----ChHHHHHHHHHHHHHHHHHH----HhcC-CEEEEEeeeeeeCCCcCCCCCcccccccc
Confidence            899999999753322111    12334568999999998887    3333 699999996432100         0    


Q ss_pred             --------------------CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcC--CC--C----c
Q 024994          146 --------------------SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE--GP--E----G  197 (259)
Q Consensus       146 --------------------~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~--~~--~----~  197 (259)
                                          +...|+.||.+.+.+++.++..   .++++..++|+.+++|.......  .+  .    .
T Consensus       158 ~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i  234 (386)
T PLN02427        158 PAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVL  234 (386)
T ss_pred             cccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhh---cCCceEEecccceeCCCCCccccccccccccchHH
Confidence                                1136999999999999887544   38999999999999986432110  00  0    0


Q ss_pred             hHHHHhhhhcCCC---------CCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCC-ceee
Q 024994          198 SEFLDGIARQTPI---------GRAGEPDEVSSLVAFLCLPAASYITGQIICVDGG-VTVT  248 (259)
Q Consensus       198 ~~~~~~~~~~~~~---------~~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG-~~~~  248 (259)
                      ..+........+.         .-+...+|++++++.++... ....|+++++.+| ..++
T Consensus       235 ~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~-~~~~g~~yni~~~~~~~s  294 (386)
T PLN02427        235 ACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENP-ARANGHIFNVGNPNNEVT  294 (386)
T ss_pred             HHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCc-ccccCceEEeCCCCCCcc
Confidence            0111222222221         12567999999998877532 1245789999876 3444

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.85  E-value=1.3e-19  Score=155.32  Aligned_cols=215  Identities=22%  Similarity=0.146  Sum_probs=152.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+|+||.++++.|+++|++|++++|+.+.....    .  ...+.++.+|++|.+++.++++        .+|
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~--~~~~~~~~~D~~~~~~l~~~~~--------~~d   66 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNL----E--GLDVEIVEGDLRDPASLRKAVA--------GCR   66 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccc----c--cCCceEEEeeCCCHHHHHHHHh--------CCC
Confidence            6899999999999999999999999999999987654221    1  2257889999999988877764        689


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCC---------------
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIP---------------  145 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~---------------  145 (259)
                      +|||+|+....      ..++.+..+++|+.++..+++++.    +.+.+++|++||...+.+.+               
T Consensus        67 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~  136 (328)
T TIGR03466        67 ALFHVAADYRL------WAPDPEEMYAANVEGTRNLLRAAL----EAGVERVVYTSSVATLGVRGDGTPADETTPSSLDD  136 (328)
T ss_pred             EEEEeceeccc------CCCCHHHHHHHHHHHHHHHHHHHH----HhCCCeEEEEechhhcCcCCCCCCcCccCCCCccc
Confidence            99999985321      122356788899999999998873    44457999999976543211               


Q ss_pred             CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCC-----CCCCCHHHHH
Q 024994          146 SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPI-----GRAGEPDEVS  220 (259)
Q Consensus       146 ~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~va  220 (259)
                      ....|+.+|.+.+.+++.++.++   +++++.++|+.+.++.......  .............+.     ..+..++|++
T Consensus       137 ~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilR~~~~~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  211 (328)
T TIGR03466       137 MIGHYKRSKFLAEQAALEMAAEK---GLPVVIVNPSTPIGPRDIKPTP--TGRIIVDFLNGKMPAYVDTGLNLVHVDDVA  211 (328)
T ss_pred             ccChHHHHHHHHHHHHHHHHHhc---CCCEEEEeCCccCCCCCCCCCc--HHHHHHHHHcCCCceeeCCCcceEEHHHHH
Confidence            13479999999999999987653   8999999999998876432211  111111111111111     1245789999


Q ss_pred             HHHHHHhCCCCCCccccEEEeCCCceee
Q 024994          221 SLVAFLCLPAASYITGQIICVDGGVTVT  248 (259)
Q Consensus       221 ~~~~~l~~~~~~~~~G~~l~~dgG~~~~  248 (259)
                      +++...+...   ..|+.++++ |..++
T Consensus       212 ~a~~~~~~~~---~~~~~~~~~-~~~~s  235 (328)
T TIGR03466       212 EGHLLALERG---RIGERYILG-GENLT  235 (328)
T ss_pred             HHHHHHHhCC---CCCceEEec-CCCcC
Confidence            9988777542   367888885 44444

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.84  E-value=2.9e-19  Score=146.04  Aligned_cols=216  Identities=23%  Similarity=0.249  Sum_probs=160.0

Q ss_pred             EEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCccEE
Q 024994            3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNIL   82 (259)
Q Consensus         3 ~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~v   82 (259)
                      ||||||+|.||.+++++|.++|+.|+.+.|+.........+.     ++.++.+|+.|.+.++++++..      ++|.|
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~dl~~~~~~~~~~~~~------~~d~v   69 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL-----NVEFVIGDLTDKEQLEKLLEKA------NIDVV   69 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT-----TEEEEESETTSHHHHHHHHHHH------TESEE
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc-----eEEEEEeecccccccccccccc------CceEE
Confidence            799999999999999999999999998888776554333221     7899999999999999998864      69999


Q ss_pred             EEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCC-----------CCChhhh
Q 024994           83 INNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI-----------PSVSLYG  151 (259)
Q Consensus        83 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~-----------~~~~~Y~  151 (259)
                      ||+|+....    ..+.+.....++.|+.++..+++++    .+.+..++|++||...+...           .+...|+
T Consensus        70 i~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~  141 (236)
T PF01370_consen   70 IHLAAFSSN----PESFEDPEEIIEANVQGTRNLLEAA----REAGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYG  141 (236)
T ss_dssp             EEEBSSSSH----HHHHHSHHHHHHHHHHHHHHHHHHH----HHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHH
T ss_pred             EEeeccccc----ccccccccccccccccccccccccc----cccccccccccccccccccccccccccccccccccccc
Confidence            999997531    1123566778889999999998888    55555799999996443221           1346799


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCC---------CCCCHHHHHHH
Q 024994          152 AYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIG---------RAGEPDEVSSL  222 (259)
Q Consensus       152 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~va~~  222 (259)
                      .+|...+.+.+.+....   ++++..++|+.+.++.............+...+....+..         -+...+|++++
T Consensus       142 ~~K~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  218 (236)
T PF01370_consen  142 ASKRAAEELLRDYAKKY---GLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEA  218 (236)
T ss_dssp             HHHHHHHHHHHHHHHHH---TSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHH
T ss_pred             ccccccccccccccccc---ccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHH
Confidence            99999999999998776   8999999999999998211111122223444444333211         13458999999


Q ss_pred             HHHHhCCCCCCccccEEEeC
Q 024994          223 VAFLCLPAASYITGQIICVD  242 (259)
Q Consensus       223 ~~~l~~~~~~~~~G~~l~~d  242 (259)
                      +.+++....  ..|+++++.
T Consensus       219 ~~~~~~~~~--~~~~~yNig  236 (236)
T PF01370_consen  219 IVAALENPK--AAGGIYNIG  236 (236)
T ss_dssp             HHHHHHHSC--TTTEEEEES
T ss_pred             HHHHHhCCC--CCCCEEEeC
Confidence            999996443  678888873

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.84  E-value=2.9e-19  Score=152.91  Aligned_cols=231  Identities=17%  Similarity=0.132  Sum_probs=156.9

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCccE
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNI   81 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~   81 (259)
                      ++|||||+|+||.+++++|.++|++|++++|...........+.... ++.++.+|+++.+++.++++.      .++|+
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~------~~~d~   73 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERIT-RVTFVEGDLRDRELLDRLFEE------HKIDA   73 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhcccc-ceEEEECCCCCHHHHHHHHHh------CCCcE
Confidence            47999999999999999999999999988765433222222222112 577889999999999888763      47999


Q ss_pred             EEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCC-----------CCCChhh
Q 024994           82 LINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-----------IPSVSLY  150 (259)
Q Consensus        82 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~-----------~~~~~~Y  150 (259)
                      |||+||.....+    ..++..+.++.|+.++..+++++    .+.+..++|++||...+..           ..+...|
T Consensus        74 vv~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y  145 (328)
T TIGR01179        74 VIHFAGLIAVGE----SVQDPLKYYRNNVVNTLNLLEAM----QQTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPY  145 (328)
T ss_pred             EEECccccCcch----hhcCchhhhhhhHHHHHHHHHHH----HhcCCCEEEEecchhhcCCCCCCCccccCCCCCCCch
Confidence            999999753322    22344567889999999998876    4444579999998654311           1234679


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCC--CCchHHH----Hhhh-hc---------CCC----
Q 024994          151 GAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEG--PEGSEFL----DGIA-RQ---------TPI----  210 (259)
Q Consensus       151 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~--~~~~~~~----~~~~-~~---------~~~----  210 (259)
                      +.+|++++.+++.++.+.  .+++++.++|+.+.++........  .......    .... ..         .|.    
T Consensus       146 ~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  223 (328)
T TIGR01179       146 GRSKLMSERILRDLSKAD--PGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGT  223 (328)
T ss_pred             HHHHHHHHHHHHHHHHhc--cCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCc
Confidence            999999999999997652  479999999999988754321100  0001011    1111 00         011    


Q ss_pred             --CCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          211 --GRAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       211 --~~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                        ..+...+|++++++.++........|+++++.++..++.
T Consensus       224 ~~~~~v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~~~~~s~  264 (328)
T TIGR01179       224 CVRDYIHVMDLADAHLAALEYLLNGGESHVYNLGYGQGFSV  264 (328)
T ss_pred             eEEeeeeHHHHHHHHHHHHhhhhcCCCcceEEcCCCCcccH
Confidence              124678999999988875322234578999988766543

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PRK06720 hypothetical protein; Provisional

Probab=99.84  E-value=1.9e-19  Score=139.63  Aligned_cols=138  Identities=22%  Similarity=0.224  Sum_probs=114.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+++||||++|||.+++++|+++|++|++++|+.+.++...+++...+....++.+|+++.++++++++++.+.+ +++|
T Consensus        17 k~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~-G~iD   95 (169)
T PRK06720         17 KVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAF-SRID   95 (169)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence            689999999999999999999999999999999888877777776556677888999999999999999999988 7899


Q ss_pred             EEEEcCCCCCCC-CCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-------CCEEEEecCCCccC
Q 024994           81 ILINNAAIAFVK-PTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-------NGSIVFISSVGGVR  142 (259)
Q Consensus        81 ~vi~~ag~~~~~-~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-------~~~ii~isS~~~~~  142 (259)
                      ++|||||..... ++++.+.++ ++  .+|+.+.+..++.+.+.|.+++       .||+..|||.++.+
T Consensus        96 ilVnnAG~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (169)
T PRK06720         96 MLFQNAGLYKIDSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQSF  162 (169)
T ss_pred             EEEECCCcCCCCCcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccccc
Confidence            999999987644 444445444 33  6777777888888888877653       48999999876644

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.84  E-value=2.1e-19  Score=150.68  Aligned_cols=220  Identities=17%  Similarity=0.131  Sum_probs=157.9

Q ss_pred             EEEcCcchHHHHHHHHHHHCC--CEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCccE
Q 024994            4 LVTGGTRGIGHATVEELARFG--AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNI   81 (259)
Q Consensus         4 lItG~s~giG~~~a~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~   81 (259)
                      |||||+|+||.+++++|+++|  ++|.++++........  .... .....++.+|++|.+++.++++        ..|+
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~--~~~~-~~~~~~~~~Di~d~~~l~~a~~--------g~d~   69 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLK--DLQK-SGVKEYIQGDITDPESLEEALE--------GVDV   69 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccch--hhhc-ccceeEEEeccccHHHHHHHhc--------CCce
Confidence            799999999999999999999  7899998876543211  1111 1133388999999999999885        6899


Q ss_pred             EEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCC---C--------------
Q 024994           82 LINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG---I--------------  144 (259)
Q Consensus        82 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~---~--------------  144 (259)
                      |||+|+......     ....+.++++|+.|+-++++++    .+.+-.++|++||.++..+   .              
T Consensus        70 V~H~Aa~~~~~~-----~~~~~~~~~vNV~GT~nvl~aa----~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~  140 (280)
T PF01073_consen   70 VFHTAAPVPPWG-----DYPPEEYYKVNVDGTRNVLEAA----RKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPS  140 (280)
T ss_pred             EEEeCccccccC-----cccHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccc
Confidence            999999754322     3456778999999999999998    4556789999999876544   1              


Q ss_pred             CCChhhhhhHHHHHHHHHHHHH-HHcc-CCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhc---CCC------CCC
Q 024994          145 PSVSLYGAYKGAMNQLTKNLAC-EWAK-DNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQ---TPI------GRA  213 (259)
Q Consensus       145 ~~~~~Y~~sK~a~~~~~~~~a~-e~~~-~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~---~~~------~~~  213 (259)
                      .....|+.||+..|.++..... ++.. ..++..+|+|..|.+|......+.     ..+.....   ...      --+
T Consensus       141 ~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~-----~~~~~~~g~~~~~~g~~~~~~~~  215 (280)
T PF01073_consen  141 SPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPR-----LVKMVRSGLFLFQIGDGNNLFDF  215 (280)
T ss_pred             cccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccch-----hhHHHHhcccceeecCCCceECc
Confidence            1345899999999999888754 1211 248999999999999976543221     11112111   111      114


Q ss_pred             CCHHHHHHHHHHHhC---CC--CCCccccEEEeCCCceee
Q 024994          214 GEPDEVSSLVAFLCL---PA--ASYITGQIICVDGGVTVT  248 (259)
Q Consensus       214 ~~~~~va~~~~~l~~---~~--~~~~~G~~l~~dgG~~~~  248 (259)
                      ..++++|++++..+.   +.  .....|+.+.+..+..+.
T Consensus       216 vyV~NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd~~p~~  255 (280)
T PF01073_consen  216 VYVENVAHAHVLAAQALLEPGKPERVAGQAYFITDGEPVP  255 (280)
T ss_pred             EeHHHHHHHHHHHHHHhccccccccCCCcEEEEECCCccC
Confidence            468999998754332   22  356899999999888776

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.83  E-value=3.6e-20  Score=152.97  Aligned_cols=221  Identities=23%  Similarity=0.235  Sum_probs=154.9

Q ss_pred             EEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhc--CCcE----EEEEecCCCHHHHHHHHHHHHHHc
Q 024994            3 ALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNK--GFKV----TGSVCDLSSREQREKLIETVTSIF   75 (259)
Q Consensus         3 ~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~--~~~~----~~~~~D~~~~~~~~~~~~~~~~~~   75 (259)
                      ||||||+|.||++++++|++.+. .+++++|++.++-.+.+++...  ..++    ..+.+|+.|.+.+++++++     
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~-----   75 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEE-----   75 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhh-----
Confidence            79999999999999999999985 7999999999999988888532  2233    3457899999999998875     


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHH
Q 024994           76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKG  155 (259)
Q Consensus        76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~  155 (259)
                       .++|+|||.|+.-+..-.++    ...+.+++|+.|+.++++++    .+.+-.++|++|+--+..   +...|++||.
T Consensus        76 -~~pdiVfHaAA~KhVpl~E~----~p~eav~tNv~GT~nv~~aa----~~~~v~~~v~ISTDKAv~---PtnvmGatKr  143 (293)
T PF02719_consen   76 -YKPDIVFHAAALKHVPLMED----NPFEAVKTNVLGTQNVAEAA----IEHGVERFVFISTDKAVN---PTNVMGATKR  143 (293)
T ss_dssp             --T-SEEEE------HHHHCC----CHHHHHHHHCHHHHHHHHHH----HHTT-SEEEEEEECGCSS-----SHHHHHHH
T ss_pred             -cCCCEEEEChhcCCCChHHh----CHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEccccccCC---CCcHHHHHHH
Confidence             38999999999866543333    34556779999999999999    455678999999976644   4588999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCC--------CCCCCHHHHHHHHHHHh
Q 024994          156 AMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPI--------GRAGEPDEVSSLVAFLC  227 (259)
Q Consensus       156 a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~va~~~~~l~  227 (259)
                      ..+.++.+++......+.++.+|+-|+|-...-+      ..+.+.+++.+.-|+        ..+.+++|.+++++.-+
T Consensus       144 laE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GS------Vip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~Lvl~a~  217 (293)
T PF02719_consen  144 LAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGS------VIPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQLVLQAA  217 (293)
T ss_dssp             HHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTS------CHHHHHHHHHTTSSEEECETT-EEEEE-HHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhhCCCCCcEEEEEEecceecCCCc------HHHHHHHHHHcCCcceeCCCCcEEEEecHHHHHHHHHHHH
Confidence            9999999998887667799999999999543222      234466676666554        22557899999887666


Q ss_pred             CCCCCCccccEEEeCCCceeee
Q 024994          228 LPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       228 ~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      ...   ..|+++.+|=|..+++
T Consensus       218 ~~~---~~geifvl~mg~~v~I  236 (293)
T PF02719_consen  218 ALA---KGGEIFVLDMGEPVKI  236 (293)
T ss_dssp             HH-----TTEEEEE---TCEEC
T ss_pred             hhC---CCCcEEEecCCCCcCH
Confidence            432   3799999999887654

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.83  E-value=1.6e-18  Score=150.05  Aligned_cols=219  Identities=16%  Similarity=0.117  Sum_probs=151.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHC-CCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCC-CHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARF-GAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLS-SREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||+|.||.+++++|+++ |++|++++|+........    . ...+.++.+|+. +.+.+.+++        .+
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~----~-~~~~~~~~~Dl~~~~~~~~~~~--------~~   68 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLV----N-HPRMHFFEGDITINKEWIEYHV--------KK   68 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhc----c-CCCeEEEeCCCCCCHHHHHHHH--------cC
Confidence            68999999999999999999986 699999998765432211    1 235888999998 666555544        36


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCC--------------
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI--------------  144 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~--------------  144 (259)
                      +|+|||+|+...+...    .++.+..+++|+.++..+++++    .+.+ .++|++||...+-..              
T Consensus        69 ~d~ViH~aa~~~~~~~----~~~p~~~~~~n~~~~~~ll~aa----~~~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~  139 (347)
T PRK11908         69 CDVILPLVAIATPATY----VKQPLRVFELDFEANLPIVRSA----VKYG-KHLVFPSTSEVYGMCPDEEFDPEASPLVY  139 (347)
T ss_pred             CCEEEECcccCChHHh----hcCcHHHHHHHHHHHHHHHHHH----HhcC-CeEEEEecceeeccCCCcCcCcccccccc
Confidence            8999999997533221    2233566789999999998887    4443 699999997432110              


Q ss_pred             ----CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCC-----CCchHHHHhhhhcCC------
Q 024994          145 ----PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEG-----PEGSEFLDGIARQTP------  209 (259)
Q Consensus       145 ----~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-----~~~~~~~~~~~~~~~------  209 (259)
                          .+...|+.||.+.+.+++.++..+   ++++..++|+.+.+|........     .........+....+      
T Consensus       140 ~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  216 (347)
T PRK11908        140 GPINKPRWIYACSKQLMDRVIWAYGMEE---GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDG  216 (347)
T ss_pred             CcCCCccchHHHHHHHHHHHHHHHHHHc---CCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecC
Confidence                112369999999999999887654   88999999999998875432111     011122222222222      


Q ss_pred             ---CCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCC
Q 024994          210 ---IGRAGEPDEVSSLVAFLCLPAASYITGQIICVDGG  244 (259)
Q Consensus       210 ---~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG  244 (259)
                         ..-+...+|++++++.++........|+++++.++
T Consensus       217 g~~~r~~i~v~D~a~a~~~~~~~~~~~~~g~~yni~~~  254 (347)
T PRK11908        217 GSQKRAFTDIDDGIDALMKIIENKDGVASGKIYNIGNP  254 (347)
T ss_pred             CceeeccccHHHHHHHHHHHHhCccccCCCCeEEeCCC
Confidence               12367899999999888864322245889999875

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.83  E-value=2.5e-18  Score=149.32  Aligned_cols=229  Identities=18%  Similarity=0.147  Sum_probs=150.5

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCC--CEEEEeeCChhHH---HHHHHHHHhc-------C-CcEEEEEecCCCHHH--HHH
Q 024994            2 TALVTGGTRGIGHATVEELARFG--AIVHTCSRNQIEL---DARLHEWKNK-------G-FKVTGSVCDLSSREQ--REK   66 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G--~~V~~~~r~~~~~---~~~~~~~~~~-------~-~~~~~~~~D~~~~~~--~~~   66 (259)
                      ++|||||||+||.+++++|+++|  ++|+++.|+.+..   +.+.+.+...       . .++.++.+|++++..  -..
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            58999999999999999999999  6899999976532   2222222211       1 478899999986421  001


Q ss_pred             HHHHHHHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCC--
Q 024994           67 LIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI--  144 (259)
Q Consensus        67 ~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~--  144 (259)
                      ..+++   . ..+|+|||||+.....       ..++..+++|+.++..+++.+    .+.+..+++++||.+.....  
T Consensus        81 ~~~~~---~-~~~d~vih~a~~~~~~-------~~~~~~~~~nv~g~~~ll~~a----~~~~~~~~v~iSS~~v~~~~~~  145 (367)
T TIGR01746        81 EWERL---A-ENVDTIVHNGALVNWV-------YPYSELRAANVLGTREVLRLA----ASGRAKPLHYVSTISVLAAIDL  145 (367)
T ss_pred             HHHHH---H-hhCCEEEeCCcEeccC-------CcHHHHhhhhhHHHHHHHHHH----hhCCCceEEEEccccccCCcCC
Confidence            11111   1 4699999999975321       234567789999999998877    34444579999998665321  


Q ss_pred             --------------CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCC-chHHHHhhh--hc
Q 024994          145 --------------PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPE-GSEFLDGIA--RQ  207 (259)
Q Consensus       145 --------------~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~-~~~~~~~~~--~~  207 (259)
                                    .....|+.+|.+.+.+++.++.    .|++++.++||.+.++.......... .........  ..
T Consensus       146 ~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~  221 (367)
T TIGR01746       146 STVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASD----RGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGA  221 (367)
T ss_pred             CCccccccccccccccCCChHHHHHHHHHHHHHHHh----cCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCC
Confidence                          1134799999999998877643    38999999999999873322211111 000111111  11


Q ss_pred             CCC-----CCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          208 TPI-----GRAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       208 ~~~-----~~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      .|.     .-+.+++|++++++.++.......+|+++++.++..+++
T Consensus       222 ~p~~~~~~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~s~  268 (367)
T TIGR01746       222 YPDSPELTEDLTPVDYVARAIVALSSQPAASAGGPVFHVVNPEPVSL  268 (367)
T ss_pred             CCCCCccccCcccHHHHHHHHHHHHhCCCcccCCceEEecCCCCCCH
Confidence            121     115678999999999886554334588999998765543

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.83  E-value=1.4e-18  Score=141.60  Aligned_cols=160  Identities=21%  Similarity=0.214  Sum_probs=127.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||.|.||++++.+|++.|++|+++|.-...-.+.+...     ...|++.|+.|.+.+++++++      .++|
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~-----~~~f~~gDi~D~~~L~~vf~~------~~id   69 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL-----QFKFYEGDLLDRALLTAVFEE------NKID   69 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc-----cCceEEeccccHHHHHHHHHh------cCCC
Confidence            68999999999999999999999999999998665544443322     167999999999999999886      4899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCC------------CCCh
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI------------PSVS  148 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~------------~~~~  148 (259)
                      .|||.||....+    .+.++..+.++.|+.+++.+++++    .+.+-.++||-|| ++.++.            .+..
T Consensus        70 aViHFAa~~~Vg----ESv~~Pl~Yy~NNv~gTl~Ll~am----~~~gv~~~vFSSt-AavYG~p~~~PI~E~~~~~p~N  140 (329)
T COG1087          70 AVVHFAASISVG----ESVQNPLKYYDNNVVGTLNLIEAM----LQTGVKKFIFSST-AAVYGEPTTSPISETSPLAPIN  140 (329)
T ss_pred             EEEECccccccc----hhhhCHHHHHhhchHhHHHHHHHH----HHhCCCEEEEecc-hhhcCCCCCcccCCCCCCCCCC
Confidence            999999976544    467778889999999999998877    6666667776555 444432            2457


Q ss_pred             hhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCce
Q 024994          149 LYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVI  183 (259)
Q Consensus       149 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v  183 (259)
                      +|+.||.+.|.+.+.+++.+   +.++..++=.++
T Consensus       141 PYG~sKlm~E~iL~d~~~a~---~~~~v~LRYFN~  172 (329)
T COG1087         141 PYGRSKLMSEEILRDAAKAN---PFKVVILRYFNV  172 (329)
T ss_pred             cchhHHHHHHHHHHHHHHhC---CCcEEEEEeccc
Confidence            89999999999999998876   577776654444

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.82  E-value=7.6e-18  Score=139.43  Aligned_cols=198  Identities=16%  Similarity=0.048  Sum_probs=130.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCH-HHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR-EQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||+|+||++++++|+++|++|+++.|+.++.+....    .+.++.++++|++|. +.+.+.+       ..++
T Consensus        18 ~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~l~~~~-------~~~~   86 (251)
T PLN00141         18 KTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP----QDPSLQIVRADVTEGSDKLVEAI-------GDDS   86 (251)
T ss_pred             CeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc----cCCceEEEEeeCCCCHHHHHHHh-------hcCC
Confidence            689999999999999999999999999999999876543321    133688899999983 3322222       1269


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccC---CCCCChhhhhhHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR---GIPSVSLYGAYKGA  156 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~---~~~~~~~Y~~sK~a  156 (259)
                      |+||+++|.....  ..  .    ..+++|+.++..+++++    .+.+.++||++||...+-   +.+....|...|..
T Consensus        87 d~vi~~~g~~~~~--~~--~----~~~~~n~~~~~~ll~a~----~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~  154 (251)
T PLN00141         87 DAVICATGFRRSF--DP--F----APWKVDNFGTVNLVEAC----RKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLF  154 (251)
T ss_pred             CEEEECCCCCcCC--CC--C----CceeeehHHHHHHHHHH----HHcCCCEEEEEccccccCCCcccccCcchhHHHHH
Confidence            9999999864211  11  1    12458888888888887    455568999999986432   22234456666654


Q ss_pred             HHHH-HHHHHHH-HccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 024994          157 MNQL-TKNLACE-WAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPA  230 (259)
Q Consensus       157 ~~~~-~~~~a~e-~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  230 (259)
                      ...+ .+..+.+ +...|++++.++||++.++.........         ....+.....+++|+++.++.++...
T Consensus       155 ~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~~~~~~~---------~~~~~~~~~i~~~dvA~~~~~~~~~~  221 (251)
T PLN00141        155 GLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPTGNIVME---------PEDTLYEGSISRDQVAEVAVEALLCP  221 (251)
T ss_pred             HHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCCCceEEEC---------CCCccccCcccHHHHHHHHHHHhcCh
Confidence            4433 2333322 4567999999999999876532110000         00011223568999999999998643

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.82  E-value=3.3e-18  Score=159.52  Aligned_cols=223  Identities=15%  Similarity=0.105  Sum_probs=154.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHC-CCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHH-HHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARF-GAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQ-REKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~~~~   78 (259)
                      |+||||||+|+||.+++++|+++ |++|++++|+........    . ..++.++.+|++|.++ +++++        ..
T Consensus       316 ~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~----~-~~~~~~~~gDl~d~~~~l~~~l--------~~  382 (660)
T PRK08125        316 TRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFL----G-HPRFHFVEGDISIHSEWIEYHI--------KK  382 (660)
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhc----C-CCceEEEeccccCcHHHHHHHh--------cC
Confidence            68999999999999999999986 799999999775432211    1 2368888999998654 33333        36


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCC-----C---------
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-----I---------  144 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~-----~---------  144 (259)
                      +|+|||+|+...+....    ++.+..+++|+.++..+++++.    +.+ .++|++||...+-.     .         
T Consensus       383 ~D~ViHlAa~~~~~~~~----~~~~~~~~~Nv~~t~~ll~a~~----~~~-~~~V~~SS~~vyg~~~~~~~~E~~~~~~~  453 (660)
T PRK08125        383 CDVVLPLVAIATPIEYT----RNPLRVFELDFEENLKIIRYCV----KYN-KRIIFPSTSEVYGMCTDKYFDEDTSNLIV  453 (660)
T ss_pred             CCEEEECccccCchhhc----cCHHHHHHhhHHHHHHHHHHHH----hcC-CeEEEEcchhhcCCCCCCCcCcccccccc
Confidence            89999999976432211    2234577899999999999883    443 69999999643210     0         


Q ss_pred             -C---CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcC-----CCCchHHHHhhhhcCCC-----
Q 024994          145 -P---SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE-----GPEGSEFLDGIARQTPI-----  210 (259)
Q Consensus       145 -~---~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~-----~~~~~~~~~~~~~~~~~-----  210 (259)
                       +   +...|+.||.+.+.+++.++..+   |+++..++|+.+++|.......     ......+........+.     
T Consensus       454 ~p~~~p~s~Yg~sK~~~E~~~~~~~~~~---g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~  530 (660)
T PRK08125        454 GPINKQRWIYSVSKQLLDRVIWAYGEKE---GLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDG  530 (660)
T ss_pred             CCCCCCccchHHHHHHHHHHHHHHHHhc---CCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCC
Confidence             1   12369999999999999987665   8999999999999986532211     11111222333222221     


Q ss_pred             ----CCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCc-eee
Q 024994          211 ----GRAGEPDEVSSLVAFLCLPAASYITGQIICVDGGV-TVT  248 (259)
Q Consensus       211 ----~~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~-~~~  248 (259)
                          .-+...+|++++++.++........|+++++.+|. ..+
T Consensus       531 g~~~rd~i~v~Dva~a~~~~l~~~~~~~~g~iyni~~~~~~~s  573 (660)
T PRK08125        531 GKQKRCFTDIRDGIEALFRIIENKDNRCDGQIINIGNPDNEAS  573 (660)
T ss_pred             CceeeceeeHHHHHHHHHHHHhccccccCCeEEEcCCCCCcee
Confidence                12567899999998887543223468999999874 444

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.81  E-value=6.2e-18  Score=158.17  Aligned_cols=224  Identities=13%  Similarity=0.077  Sum_probs=155.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHC--CCEEEEeeCCh--hHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024994            1 MTALVTGGTRGIGHATVEELARF--GAIVHTCSRNQ--IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ   76 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~--G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (259)
                      |+||||||+|+||++++++|.++  |++|+.++|..  +........  ....++.++.+|++|.+.+++++..      
T Consensus         7 ~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~--~~~~~v~~~~~Dl~d~~~~~~~~~~------   78 (668)
T PLN02260          7 KNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPS--KSSPNFKFVKGDIASADLVNYLLIT------   78 (668)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhc--ccCCCeEEEECCCCChHHHHHHHhh------
Confidence            68999999999999999999998  67899998753  222221110  1134688999999998887765532      


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccC-------------
Q 024994           77 GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVR-------------  142 (259)
Q Consensus        77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~-------------  142 (259)
                      .++|+|||+|+......    ...+....+++|+.++..+++++    ++.+ ..++|++||...+-             
T Consensus        79 ~~~D~ViHlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~  150 (668)
T PLN02260         79 EGIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEAC----KVTGQIRRFIHVSTDEVYGETDEDADVGNHEA  150 (668)
T ss_pred             cCCCEEEECCCccCchh----hhhCHHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEcchHHhCCCccccccCcccc
Confidence            37999999999754321    12233567789999999999887    4433 47999999964321             


Q ss_pred             -CCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCC---------CC
Q 024994          143 -GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPI---------GR  212 (259)
Q Consensus       143 -~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---------~~  212 (259)
                       +..+...|+.+|.+.+.+++.++.++   ++++..++|+.++++.....   .....+........++         ..
T Consensus       151 ~~~~p~~~Y~~sK~~aE~~v~~~~~~~---~l~~vilR~~~VyGp~~~~~---~~i~~~~~~a~~g~~i~i~g~g~~~r~  224 (668)
T PLN02260        151 SQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPE---KLIPKFILLAMQGKPLPIHGDGSNVRS  224 (668)
T ss_pred             CCCCCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECcccccCcCCCcc---cHHHHHHHHHhCCCCeEEecCCCceEe
Confidence             11134679999999999999887665   89999999999998864211   1111122222222211         12


Q ss_pred             CCCHHHHHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          213 AGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       213 ~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      +...+|+++++..++...   ..|+++++.++..+++
T Consensus       225 ~ihV~Dva~a~~~~l~~~---~~~~vyni~~~~~~s~  258 (668)
T PLN02260        225 YLYCEDVAEAFEVVLHKG---EVGHVYNIGTKKERRV  258 (668)
T ss_pred             eEEHHHHHHHHHHHHhcC---CCCCEEEECCCCeeEH
Confidence            456899999998877432   3478999998876643

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.80  E-value=1.7e-17  Score=144.68  Aligned_cols=221  Identities=16%  Similarity=0.055  Sum_probs=150.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+|.||.+++++|.++|++|++++|......      ........++.+|++|.+.+.++++        ++|
T Consensus        22 ~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~------~~~~~~~~~~~~Dl~d~~~~~~~~~--------~~D   87 (370)
T PLN02695         22 LRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHM------SEDMFCHEFHLVDLRVMENCLKVTK--------GVD   87 (370)
T ss_pred             CEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccc------ccccccceEEECCCCCHHHHHHHHh--------CCC
Confidence            68999999999999999999999999999998643211      1111134677899999877666552        589


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccC-----------------C
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR-----------------G  143 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~-----------------~  143 (259)
                      +|||+|+.........   .+....+..|+.++..+++++    .+.+..++|++||...+-                 +
T Consensus        88 ~Vih~Aa~~~~~~~~~---~~~~~~~~~N~~~t~nll~aa----~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p  160 (370)
T PLN02695         88 HVFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEAA----RINGVKRFFYASSACIYPEFKQLETNVSLKESDAWP  160 (370)
T ss_pred             EEEEcccccCCccccc---cCchhhHHHHHHHHHHHHHHH----HHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCC
Confidence            9999998653222111   112345678999999999887    444457999999964221                 2


Q ss_pred             CCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCC-CchHHHHhhhh-cCCC---------CC
Q 024994          144 IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGP-EGSEFLDGIAR-QTPI---------GR  212 (259)
Q Consensus       144 ~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~-~~~~~~~~~~~-~~~~---------~~  212 (259)
                      ..+...|+.+|.+.+.+++.++..+   |+++..++|+.+++|......... ....+...... ..++         ..
T Consensus       161 ~~p~s~Yg~sK~~~E~~~~~~~~~~---g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~  237 (370)
T PLN02695        161 AEPQDAYGLEKLATEELCKHYTKDF---GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRS  237 (370)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEe
Confidence            2345689999999999999887654   899999999999998542111000 01112222211 1111         12


Q ss_pred             CCCHHHHHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          213 AGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       213 ~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      +...+|+++++..++...    .++++++.+|..+++
T Consensus       238 ~i~v~D~a~ai~~~~~~~----~~~~~nv~~~~~~s~  270 (370)
T PLN02695        238 FTFIDECVEGVLRLTKSD----FREPVNIGSDEMVSM  270 (370)
T ss_pred             EEeHHHHHHHHHHHHhcc----CCCceEecCCCceeH
Confidence            457899999998877542    257899988876543

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.80  E-value=4e-18  Score=145.20  Aligned_cols=218  Identities=13%  Similarity=0.123  Sum_probs=142.5

Q ss_pred             EEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH--cCCCcc
Q 024994            3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSI--FQGKLN   80 (259)
Q Consensus         3 ~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~--~~~~id   80 (259)
                      +|||||+|+||++++++|+++|+.++++.|+........          .+..+|+.|..+.+.+++.+.+.  + +++|
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~~----------~~~~~~~~d~~~~~~~~~~~~~~~~~-~~~d   70 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFV----------NLVDLDIADYMDKEDFLAQIMAGDDF-GDIE   70 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHHH----------hhhhhhhhhhhhHHHHHHHHhccccc-CCcc
Confidence            799999999999999999999997666555433221110          11235666665555555554321  2 3799


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCC-----------CCCChh
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-----------IPSVSL  149 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~-----------~~~~~~  149 (259)
                      +|||+|+.....   +.+.   +.+++.|+.++..+++++    .+.+ .++|++||...+-.           ..+...
T Consensus        71 ~Vih~A~~~~~~---~~~~---~~~~~~n~~~t~~ll~~~----~~~~-~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~  139 (308)
T PRK11150         71 AIFHEGACSSTT---EWDG---KYMMDNNYQYSKELLHYC----LERE-IPFLYASSAATYGGRTDDFIEEREYEKPLNV  139 (308)
T ss_pred             EEEECceecCCc---CCCh---HHHHHHHHHHHHHHHHHH----HHcC-CcEEEEcchHHhCcCCCCCCccCCCCCCCCH
Confidence            999999964322   1122   346899999999999887    4443 47999999753221           123467


Q ss_pred             hhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCC-CchHHHHhhhhcC-C---C------CCCCCHHH
Q 024994          150 YGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGP-EGSEFLDGIARQT-P---I------GRAGEPDE  218 (259)
Q Consensus       150 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~-~~~~~~~~~~~~~-~---~------~~~~~~~~  218 (259)
                      |+.||.+.+.+++.++.+.   ++++..++|+.+.++......... ........+.... +   .      .-+...+|
T Consensus       140 Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D  216 (308)
T PRK11150        140 YGYSKFLFDEYVRQILPEA---NSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGD  216 (308)
T ss_pred             HHHHHHHHHHHHHHHHHHc---CCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHH
Confidence            9999999999999886553   799999999999988653211101 1011112222221 1   1      12467899


Q ss_pred             HHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          219 VSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       219 va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      ++++++.++...    .+.++++.+|..+++
T Consensus       217 ~a~a~~~~~~~~----~~~~yni~~~~~~s~  243 (308)
T PRK11150        217 VAAVNLWFWENG----VSGIFNCGTGRAESF  243 (308)
T ss_pred             HHHHHHHHHhcC----CCCeEEcCCCCceeH
Confidence            999988777532    246899988876653

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.80  E-value=1e-17  Score=142.63  Aligned_cols=217  Identities=27%  Similarity=0.281  Sum_probs=153.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |.+|||||+|+||.+++++|.++|++|+.++|...+.....       ..+.++.+|+++.+...+.++.       ..|
T Consensus         1 ~~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~-------~~d   66 (314)
T COG0451           1 MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL-------SGVEFVVLDLTDRDLVDELAKG-------VPD   66 (314)
T ss_pred             CeEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc-------cccceeeecccchHHHHHHHhc-------CCC
Confidence            56999999999999999999999999999999877654432       3677889999998665555542       129


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCC-----------CC--C
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI-----------PS--V  147 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~-----------~~--~  147 (259)
                      .|||+|+........  .. +....+++|+.++.++++++    .+.+..++|+.||.+...+.           +.  .
T Consensus        67 ~vih~aa~~~~~~~~--~~-~~~~~~~~nv~gt~~ll~aa----~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~  139 (314)
T COG0451          67 AVIHLAAQSSVPDSN--AS-DPAEFLDVNVDGTLNLLEAA----RAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPL  139 (314)
T ss_pred             EEEEccccCchhhhh--hh-CHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCC
Confidence            999999976432111  11 45568899999999999998    44567899996664433321           11  1


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCC---CC-------CCCCHH
Q 024994          148 SLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTP---IG-------RAGEPD  217 (259)
Q Consensus       148 ~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~---~~-------~~~~~~  217 (259)
                      ..|+.+|.+.+.+++.++.   ..++.+..++|+.+..|......................+   ..       -+...+
T Consensus       140 ~~Yg~sK~~~E~~~~~~~~---~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  216 (314)
T COG0451         140 NPYGVSKLAAEQLLRAYAR---LYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVD  216 (314)
T ss_pred             CHHHHHHHHHHHHHHHHHH---HhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHH
Confidence            2599999999999999987   4489999999999998886543221111111222232332   11       145689


Q ss_pred             HHHHHHHHHhCCCCCCccccEEEeCCCc
Q 024994          218 EVSSLVAFLCLPAASYITGQIICVDGGV  245 (259)
Q Consensus       218 ~va~~~~~l~~~~~~~~~G~~l~~dgG~  245 (259)
                      |+++++..++......    .+++.++.
T Consensus       217 D~a~~~~~~~~~~~~~----~~ni~~~~  240 (314)
T COG0451         217 DVADALLLALENPDGG----VFNIGSGT  240 (314)
T ss_pred             HHHHHHHHHHhCCCCc----EEEeCCCC
Confidence            9999999888644322    88888875

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.80  E-value=5e-18  Score=148.90  Aligned_cols=211  Identities=16%  Similarity=0.181  Sum_probs=145.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHH--HHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDA--RLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||+|+||++++++|+++|++|++++|+.++...  ...+......++.++.+|++|.+++.++++..    +.+
T Consensus        61 ~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~----~~~  136 (390)
T PLN02657         61 VTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSE----GDP  136 (390)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHh----CCC
Confidence            589999999999999999999999999999998765431  11111122346889999999999999888753    126


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      +|+||||++.....     .    ...+++|+.++..+++++    ++.+.+++|++||.+...   +...|..+|...+
T Consensus       137 ~D~Vi~~aa~~~~~-----~----~~~~~vn~~~~~~ll~aa----~~~gv~r~V~iSS~~v~~---p~~~~~~sK~~~E  200 (390)
T PLN02657        137 VDVVVSCLASRTGG-----V----KDSWKIDYQATKNSLDAG----REVGAKHFVLLSAICVQK---PLLEFQRAKLKFE  200 (390)
T ss_pred             CcEEEECCccCCCC-----C----ccchhhHHHHHHHHHHHH----HHcCCCEEEEEeeccccC---cchHHHHHHHHHH
Confidence            99999999853211     1    123457888888888776    555567999999987543   3456888999888


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCC---C--C-----CCCCHHHHHHHHHHHhC
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTP---I--G-----RAGEPDEVSSLVAFLCL  228 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~---~--~-----~~~~~~~va~~~~~l~~  228 (259)
                      ...+.     ...+++.+.++|+.+..++..          .........+   .  +     ...+.+|++.++..++.
T Consensus       201 ~~l~~-----~~~gl~~tIlRp~~~~~~~~~----------~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~  265 (390)
T PLN02657        201 AELQA-----LDSDFTYSIVRPTAFFKSLGG----------QVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVL  265 (390)
T ss_pred             HHHHh-----ccCCCCEEEEccHHHhcccHH----------HHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHh
Confidence            76654     235899999999877644321          1111111111   0  1     13578899998888775


Q ss_pred             CCCCCccccEEEeCC-Cceee
Q 024994          229 PAASYITGQIICVDG-GVTVT  248 (259)
Q Consensus       229 ~~~~~~~G~~l~~dg-G~~~~  248 (259)
                      +.  ...|+++++.| +..++
T Consensus       266 ~~--~~~~~~~~Iggp~~~~S  284 (390)
T PLN02657        266 DE--SKINKVLPIGGPGKALT  284 (390)
T ss_pred             Cc--cccCCEEEcCCCCcccC
Confidence            33  23578999987 44444

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.79  E-value=2.7e-17  Score=146.15  Aligned_cols=217  Identities=16%  Similarity=0.087  Sum_probs=147.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHH-HHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDA-RLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |+||||||+|+||.+++++|.++|++|++++|......+ ....+  ...++.++..|+.+..     +        ..+
T Consensus       120 ~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~--~~~~~~~i~~D~~~~~-----l--------~~~  184 (442)
T PLN02206        120 LRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHF--SNPNFELIRHDVVEPI-----L--------LEV  184 (442)
T ss_pred             CEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhc--cCCceEEEECCccChh-----h--------cCC
Confidence            689999999999999999999999999999875332211 11111  1235778888987642     1        258


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccC----------------C
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR----------------G  143 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~----------------~  143 (259)
                      |+|||+|+...+...    .++.++.+++|+.++..+++++    ++.+ .++|++||...+.                +
T Consensus       185 D~ViHlAa~~~~~~~----~~~p~~~~~~Nv~gt~nLleaa----~~~g-~r~V~~SS~~VYg~~~~~p~~E~~~~~~~P  255 (442)
T PLN02206        185 DQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVYGDPLQHPQVETYWGNVNP  255 (442)
T ss_pred             CEEEEeeeecchhhh----hcCHHHHHHHHHHHHHHHHHHH----HHhC-CEEEEECChHHhCCCCCCCCCccccccCCC
Confidence            999999996533211    1234568899999999999988    4443 4899999976432                1


Q ss_pred             CCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCC-----C----CCC
Q 024994          144 IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPI-----G----RAG  214 (259)
Q Consensus       144 ~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-----~----~~~  214 (259)
                      ..+...|+.+|.+.+.+++.+...+   ++++..++|+.+++|..... .......+........+.     +    -+.
T Consensus       256 ~~~~s~Y~~SK~~aE~~~~~y~~~~---g~~~~ilR~~~vyGp~~~~~-~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi  331 (442)
T PLN02206        256 IGVRSCYDEGKRTAETLTMDYHRGA---NVEVRIARIFNTYGPRMCID-DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQ  331 (442)
T ss_pred             CCccchHHHHHHHHHHHHHHHHHHh---CCCeEEEEeccccCCCCCcc-ccchHHHHHHHHHcCCCcEEeCCCCEEEeEE
Confidence            1124579999999999998886665   89999999999998864211 111111222333222221     1    145


Q ss_pred             CHHHHHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          215 EPDEVSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       215 ~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      ..+|+++++..++...    .+..+++.+|..+++
T Consensus       332 ~V~Dva~ai~~a~e~~----~~g~yNIgs~~~~sl  362 (442)
T PLN02206        332 FVSDLVEGLMRLMEGE----HVGPFNLGNPGEFTM  362 (442)
T ss_pred             eHHHHHHHHHHHHhcC----CCceEEEcCCCceeH
Confidence            7899999998877532    234899988876553

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.78  E-value=4.9e-17  Score=144.29  Aligned_cols=218  Identities=15%  Similarity=0.056  Sum_probs=147.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+||||||+|+||.+++++|.++|++|++++|...........+.. ..++.++..|+.+..     +        .++|
T Consensus       121 mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~-~~~~~~~~~Di~~~~-----~--------~~~D  186 (436)
T PLN02166        121 LRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFG-NPRFELIRHDVVEPI-----L--------LEVD  186 (436)
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhcc-CCceEEEECcccccc-----c--------cCCC
Confidence            5899999999999999999999999999999864322111111111 235777888886541     1        2589


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccC----------------CC
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR----------------GI  144 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~----------------~~  144 (259)
                      +|||+|+........    .+.+..+++|+.++..+++++    .+.+ .++|++||...+-                +.
T Consensus       187 ~ViHlAa~~~~~~~~----~~p~~~~~~Nv~gT~nLleaa----~~~g-~r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~  257 (436)
T PLN02166        187 QIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLA----KRVG-ARFLLTSTSEVYGDPLEHPQKETYWGNVNPI  257 (436)
T ss_pred             EEEECceeccchhhc----cCHHHHHHHHHHHHHHHHHHH----HHhC-CEEEEECcHHHhCCCCCCCCCccccccCCCC
Confidence            999999975332211    133577889999999999888    4433 4899999965321                11


Q ss_pred             CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCC---------CCCCC
Q 024994          145 PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPI---------GRAGE  215 (259)
Q Consensus       145 ~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~  215 (259)
                      .+...|+.+|.+.+.+++.+.+.+   ++++..++|+.++++..... .......+...+....+.         .-+..
T Consensus       258 ~p~s~Yg~SK~~aE~~~~~y~~~~---~l~~~ilR~~~vYGp~~~~~-~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~  333 (436)
T PLN02166        258 GERSCYDEGKRTAETLAMDYHRGA---GVEVRIARIFNTYGPRMCLD-DGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQY  333 (436)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHh---CCCeEEEEEccccCCCCCCC-ccchHHHHHHHHhcCCCcEEeCCCCeEEeeEE
Confidence            224569999999999999886654   89999999999999864311 111111223333322221         12456


Q ss_pred             HHHHHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          216 PDEVSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       216 ~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      .+|+++++..++...    .+.++++.+|..+++
T Consensus       334 V~Dva~ai~~~~~~~----~~giyNIgs~~~~Si  363 (436)
T PLN02166        334 VSDLVDGLVALMEGE----HVGPFNLGNPGEFTM  363 (436)
T ss_pred             HHHHHHHHHHHHhcC----CCceEEeCCCCcEeH
Confidence            899999998887532    234899988876554

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.78  E-value=1.6e-17  Score=142.16  Aligned_cols=210  Identities=15%  Similarity=0.062  Sum_probs=141.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+++||||||.||++++++|.++|++|++++|+.++.....      ...+.++.+|++|.+++.++++        .+|
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~------~~~v~~v~~Dl~d~~~l~~al~--------g~d   66 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLK------EWGAELVYGDLSLPETLPPSFK--------GVT   66 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHh------hcCCEEEECCCCCHHHHHHHHC--------CCC
Confidence            68999999999999999999999999999999876543221      1257889999999998877764        589


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +|||+++....         +.....++|+.++.++++++    ++.+-.++|++||..+..  .+...|..+|...+.+
T Consensus        67 ~Vi~~~~~~~~---------~~~~~~~~~~~~~~~l~~aa----~~~gvkr~I~~Ss~~~~~--~~~~~~~~~K~~~e~~  131 (317)
T CHL00194         67 AIIDASTSRPS---------DLYNAKQIDWDGKLALIEAA----KAAKIKRFIFFSILNAEQ--YPYIPLMKLKSDIEQK  131 (317)
T ss_pred             EEEECCCCCCC---------CccchhhhhHHHHHHHHHHH----HHcCCCEEEEeccccccc--cCCChHHHHHHHHHHH
Confidence            99998764211         12235568889998888887    555567999999864321  1234578888887765


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC  240 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~  240 (259)
                      .+       ..+++.+.++|+.+..++........... .............+...+|+++++..++...  ...|++++
T Consensus       132 l~-------~~~l~~tilRp~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~--~~~~~~~n  201 (317)
T CHL00194        132 LK-------KSGIPYTIFRLAGFFQGLISQYAIPILEK-QPIWITNESTPISYIDTQDAAKFCLKSLSLP--ETKNKTFP  201 (317)
T ss_pred             HH-------HcCCCeEEEeecHHhhhhhhhhhhhhccC-CceEecCCCCccCccCHHHHHHHHHHHhcCc--cccCcEEE
Confidence            43       24899999999866543321110000000 0000000000113456799999998887532  23589999


Q ss_pred             eCCCceeee
Q 024994          241 VDGGVTVTV  249 (259)
Q Consensus       241 ~dgG~~~~~  249 (259)
                      +.|+..++.
T Consensus       202 i~g~~~~s~  210 (317)
T CHL00194        202 LVGPKSWNS  210 (317)
T ss_pred             ecCCCccCH
Confidence            999876653

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.76  E-value=7.6e-17  Score=137.46  Aligned_cols=220  Identities=14%  Similarity=0.088  Sum_probs=146.5

Q ss_pred             EEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCccE
Q 024994            3 ALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNI   81 (259)
Q Consensus         3 ~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~   81 (259)
                      +|||||+|.||.+++++|.++|+ .|++++|..... .. .++     ....+..|+++.+.++.+.+.   .+ .++|+
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~-~~~-----~~~~~~~d~~~~~~~~~~~~~---~~-~~~D~   69 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KF-LNL-----ADLVIADYIDKEDFLDRLEKG---AF-GKIEA   69 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hh-hhh-----hheeeeccCcchhHHHHHHhh---cc-CCCCE
Confidence            68999999999999999999998 788888754322 11 111     113456788887776665542   23 47999


Q ss_pred             EEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCC-----------CCCChhh
Q 024994           82 LINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-----------IPSVSLY  150 (259)
Q Consensus        82 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~-----------~~~~~~Y  150 (259)
                      |||+|+....      ..++.+..+++|+.++..+++++    .+.+ .++|++||...+-.           ..+...|
T Consensus        70 vvh~A~~~~~------~~~~~~~~~~~n~~~~~~ll~~~----~~~~-~~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y  138 (314)
T TIGR02197        70 IFHQGACSDT------TETDGEYMMENNYQYSKRLLDWC----AEKG-IPFIYASSAATYGDGEAGFREGRELERPLNVY  138 (314)
T ss_pred             EEECccccCc------cccchHHHHHHHHHHHHHHHHHH----HHhC-CcEEEEccHHhcCCCCCCcccccCcCCCCCHH
Confidence            9999996421      22345678899999999999887    3333 48999999654321           1245689


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcC-CCCchHHHHhhhhcCCC---------------CCCC
Q 024994          151 GAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE-GPEGSEFLDGIARQTPI---------------GRAG  214 (259)
Q Consensus       151 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~---------------~~~~  214 (259)
                      +.+|.+.+.+++.+.... ..++++..++|+.++++....... ......+........+.               .-+.
T Consensus       139 ~~sK~~~e~~~~~~~~~~-~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i  217 (314)
T TIGR02197       139 GYSKFLFDQYVRRRVLPE-ALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFV  217 (314)
T ss_pred             HHHHHHHHHHHHHHhHhh-ccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeE
Confidence            999999999998754332 235789999999998876432110 00001122222221111               1256


Q ss_pred             CHHHHHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          215 EPDEVSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       215 ~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      ..+|+++++..++..    ..+.++++.++..++.
T Consensus       218 ~v~D~a~~i~~~~~~----~~~~~yni~~~~~~s~  248 (314)
T TIGR02197       218 YVKDVVDVNLWLLEN----GVSGIFNLGTGRARSF  248 (314)
T ss_pred             EHHHHHHHHHHHHhc----ccCceEEcCCCCCccH
Confidence            789999999988864    2466899998876654

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.76  E-value=9.8e-17  Score=135.17  Aligned_cols=198  Identities=19%  Similarity=0.168  Sum_probs=139.8

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCccE
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNI   81 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~   81 (259)
                      ++|||||+|+||.+++++|.++|++|++++|+                     .+|+.+.++++++++.      .++|+
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~---------------------~~d~~~~~~~~~~~~~------~~~d~   53 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS---------------------QLDLTDPEALERLLRA------IRPDA   53 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc---------------------ccCCCCHHHHHHHHHh------CCCCE
Confidence            47999999999999999999999999999985                     4799999998888764      26899


Q ss_pred             EEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCC-----------CCCChhh
Q 024994           82 LINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-----------IPSVSLY  150 (259)
Q Consensus        82 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~-----------~~~~~~Y  150 (259)
                      |||+|+......    .....+..+++|+.++..+++++    .+.+ .++|++||...+.+           ..+...|
T Consensus        54 vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y  124 (287)
T TIGR01214        54 VVNTAAYTDVDG----AESDPEKAFAVNALAPQNLARAA----ARHG-ARLVHISTDYVFDGEGKRPYREDDATNPLNVY  124 (287)
T ss_pred             EEECCccccccc----cccCHHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEeeeeeecCCCCCCCCCCCCCCCcchh
Confidence            999999653221    12335667889999999999987    3333 48999999653321           1134679


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCC-------CCCCCCHHHHHHHH
Q 024994          151 GAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTP-------IGRAGEPDEVSSLV  223 (259)
Q Consensus       151 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~va~~~  223 (259)
                      +.+|.+.+.+++.+       +.+++.++|+.+.++.....    .............+       ...+...+|+++++
T Consensus       125 ~~~K~~~E~~~~~~-------~~~~~ilR~~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~  193 (287)
T TIGR01214       125 GQSKLAGEQAIRAA-------GPNALIVRTSWLYGGGGGRN----FVRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVI  193 (287)
T ss_pred             hHHHHHHHHHHHHh-------CCCeEEEEeeecccCCCCCC----HHHHHHHHhhcCCCceEecCCCcCCcCHHHHHHHH
Confidence            99999999888765       46889999999988863211    00111222221111       12245679999999


Q ss_pred             HHHhCCCCCCccccEEEeCCCceee
Q 024994          224 AFLCLPAASYITGQIICVDGGVTVT  248 (259)
Q Consensus       224 ~~l~~~~~~~~~G~~l~~dgG~~~~  248 (259)
                      ..++...  ..-++++++.++..++
T Consensus       194 ~~~~~~~--~~~~~~~ni~~~~~~s  216 (287)
T TIGR01214       194 AALLQRL--ARARGVYHLANSGQCS  216 (287)
T ss_pred             HHHHhhc--cCCCCeEEEECCCCcC
Confidence            8888542  1235678887766554

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.76  E-value=6.4e-17  Score=137.43  Aligned_cols=207  Identities=17%  Similarity=0.136  Sum_probs=142.0

Q ss_pred             EEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCccEEE
Q 024994            4 LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILI   83 (259)
Q Consensus         4 lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~vi   83 (259)
                      |||||+|+||.++++.|.++|+.|+++.+.                    ..+|++|.++++++++.      .++|+||
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~--------------------~~~Dl~~~~~l~~~~~~------~~~d~Vi   54 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH--------------------KELDLTRQADVEAFFAK------EKPTYVI   54 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc--------------------ccCCCCCHHHHHHHHhc------cCCCEEE
Confidence            699999999999999999999987766432                    14899999988887764      2689999


Q ss_pred             EcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCC-------------C--C-C
Q 024994           84 NNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI-------------P--S-V  147 (259)
Q Consensus        84 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~-------------~--~-~  147 (259)
                      |+|+.......   ..++.+..++.|+.++..+++++    .+.+.+++|++||...+-+.             +  + .
T Consensus        55 h~A~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~  127 (306)
T PLN02725         55 LAAAKVGGIHA---NMTYPADFIRENLQIQTNVIDAA----YRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTN  127 (306)
T ss_pred             Eeeeeecccch---hhhCcHHHHHHHhHHHHHHHHHH----HHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCc
Confidence            99997432111   11223456779999999999888    45555799999996543210             1  1 2


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcC-CCCchHHHHhh----hhcC----------CCCC
Q 024994          148 SLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE-GPEGSEFLDGI----ARQT----------PIGR  212 (259)
Q Consensus       148 ~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~----~~~~----------~~~~  212 (259)
                      ..|+.||.+.+.+.+.+..++   ++++..++|+.+.++....... ..........+    ....          +...
T Consensus       128 ~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~  204 (306)
T PLN02725        128 EWYAIAKIAGIKMCQAYRIQY---GWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLRE  204 (306)
T ss_pred             chHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeec
Confidence            359999999999998887665   7999999999999986421111 01111111111    1111          1224


Q ss_pred             CCCHHHHHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          213 AGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       213 ~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      +..++|+++++..++....   .+..+++.+|..+++
T Consensus       205 ~i~v~Dv~~~~~~~~~~~~---~~~~~ni~~~~~~s~  238 (306)
T PLN02725        205 FLHVDDLADAVVFLMRRYS---GAEHVNVGSGDEVTI  238 (306)
T ss_pred             cccHHHHHHHHHHHHhccc---cCcceEeCCCCcccH
Confidence            6788999999988886421   335678988876554

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.75  E-value=7.3e-17  Score=136.90  Aligned_cols=148  Identities=18%  Similarity=0.147  Sum_probs=112.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+|.||++++++|.++| +|+.++|...                 .+..|++|.+.+.++++.      .++|
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-----------------~~~~Dl~d~~~~~~~~~~------~~~D   56 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST-----------------DYCGDFSNPEGVAETVRK------IRPD   56 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-----------------cccCCCCCHHHHHHHHHh------cCCC
Confidence            689999999999999999999999 7888887531                 235799999998888764      2689


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccC-----------CCCCChh
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR-----------GIPSVSL  149 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~-----------~~~~~~~  149 (259)
                      +|||+|+......    ..++.+..+.+|+.++..+++++    .+.+ .++|++||...+-           +..+...
T Consensus        57 ~Vih~Aa~~~~~~----~~~~~~~~~~~N~~~~~~l~~aa----~~~g-~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~  127 (299)
T PRK09987         57 VIVNAAAHTAVDK----AESEPEFAQLLNATSVEAIAKAA----NEVG-AWVVHYSTDYVFPGTGDIPWQETDATAPLNV  127 (299)
T ss_pred             EEEECCccCCcch----hhcCHHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEccceEECCCCCCCcCCCCCCCCCCH
Confidence            9999999764321    12233556779999999999988    4443 5899999964321           1123467


Q ss_pred             hhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCC
Q 024994          150 YGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI  188 (259)
Q Consensus       150 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~  188 (259)
                      |+.||.+.+.+++.+.       .+...++|+++++|..
T Consensus       128 Yg~sK~~~E~~~~~~~-------~~~~ilR~~~vyGp~~  159 (299)
T PRK09987        128 YGETKLAGEKALQEHC-------AKHLIFRTSWVYAGKG  159 (299)
T ss_pred             HHHHHHHHHHHHHHhC-------CCEEEEecceecCCCC
Confidence            9999999999887653       2458899999998753

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.73  E-value=1.4e-15  Score=142.21  Aligned_cols=224  Identities=21%  Similarity=0.144  Sum_probs=146.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHH--HCCCEEEEeeCChhHHHHHHHHHHhc-CCcEEEEEecCCCHHHH--HHHHHHHHHHc
Q 024994            1 MTALVTGGTRGIGHATVEELA--RFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSSREQR--EKLIETVTSIF   75 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~--~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~--~~~~~~~~~~~   75 (259)
                      |++|||||+|+||.+++++|+  ++|++|++++|+.... ......... ..++.++.+|++|.+..  ...++++    
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~-~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l----   75 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLS-RLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL----   75 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHH-HHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh----
Confidence            689999999999999999999  5899999999965432 111111111 14688999999985310  1112222    


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCC------------
Q 024994           76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG------------  143 (259)
Q Consensus        76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~------------  143 (259)
                       .++|+|||+|+.....    .+   .+...++|+.++..+++++    .+.+..++|++||...+-.            
T Consensus        76 -~~~D~Vih~Aa~~~~~----~~---~~~~~~~nv~gt~~ll~~a----~~~~~~~~v~~SS~~v~g~~~~~~~e~~~~~  143 (657)
T PRK07201         76 -GDIDHVVHLAAIYDLT----AD---EEAQRAANVDGTRNVVELA----ERLQAATFHHVSSIAVAGDYEGVFREDDFDE  143 (657)
T ss_pred             -cCCCEEEECceeecCC----CC---HHHHHHHHhHHHHHHHHHH----HhcCCCeEEEEeccccccCccCccccccchh
Confidence             3799999999964321    12   2456679999999998887    4555679999999754311            


Q ss_pred             -CCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchH----HHHhhhhc---CCC-----
Q 024994          144 -IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSE----FLDGIARQ---TPI-----  210 (259)
Q Consensus       144 -~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~----~~~~~~~~---~~~-----  210 (259)
                       ......|+.+|...+.+++.      ..+++++.++|+.+.++.............    ........   .+.     
T Consensus       144 ~~~~~~~Y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (657)
T PRK07201        144 GQGLPTPYHRTKFEAEKLVRE------ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDG  217 (657)
T ss_pred             hcCCCCchHHHHHHHHHHHHH------cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCC
Confidence             11235699999999988763      248999999999998864321111101100    11111110   110     


Q ss_pred             --CCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          211 --GRAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       211 --~~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                        ..+.+.+|+++++..++..  ....|+++++.++..+++
T Consensus       218 ~~~~~v~vddva~ai~~~~~~--~~~~g~~~ni~~~~~~s~  256 (657)
T PRK07201        218 GRTNIVPVDYVADALDHLMHK--DGRDGQTFHLTDPKPQRV  256 (657)
T ss_pred             CeeeeeeHHHHHHHHHHHhcC--cCCCCCEEEeCCCCCCcH
Confidence              1234589999999888753  345789999988876654

>PRK05865 hypothetical protein; Provisional

Probab=99.70  E-value=2e-15  Score=141.84  Aligned_cols=183  Identities=17%  Similarity=0.190  Sum_probs=133.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+++||||+|+||.+++++|+++|++|++++|+....      .   ..++.++.+|++|.+++.++++        .+|
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~---~~~v~~v~gDL~D~~~l~~al~--------~vD   63 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W---PSSADFIAADIRDATAVESAMT--------GAD   63 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c---ccCceEEEeeCCCHHHHHHHHh--------CCC
Confidence            6899999999999999999999999999999975321      1   1257788999999998887764        589


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +|||+|+....             .+++|+.++..+++++    .+.+.+++|++||..              |.+.+.+
T Consensus        64 ~VVHlAa~~~~-------------~~~vNv~GT~nLLeAa----~~~gvkr~V~iSS~~--------------K~aaE~l  112 (854)
T PRK05865         64 VVAHCAWVRGR-------------NDHINIDGTANVLKAM----AETGTGRIVFTSSGH--------------QPRVEQM  112 (854)
T ss_pred             EEEECCCcccc-------------hHHHHHHHHHHHHHHH----HHcCCCeEEEECCcH--------------HHHHHHH
Confidence            99999985321             3578999998887766    555567999999953              7777765


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhc--CCCC------CCCCHHHHHHHHHHHhCCCCC
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQ--TPIG------RAGEPDEVSSLVAFLCLPAAS  232 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~--~~~~------~~~~~~~va~~~~~l~~~~~~  232 (259)
                      ++    +   .++++..++|++++++....         +.......  .+.+      .+...+|+++++..++...  
T Consensus       113 l~----~---~gl~~vILRp~~VYGP~~~~---------~i~~ll~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~--  174 (854)
T PRK05865        113 LA----D---CGLEWVAVRCALIFGRNVDN---------WVQRLFALPVLPAGYADRVVQVVHSDDAQRLLVRALLDT--  174 (854)
T ss_pred             HH----H---cCCCEEEEEeceEeCCChHH---------HHHHHhcCceeccCCCCceEeeeeHHHHHHHHHHHHhCC--
Confidence            53    2   38999999999999875211         11111111  1111      2567899999998887432  


Q ss_pred             CccccEEEeCCCceeee
Q 024994          233 YITGQIICVDGGVTVTV  249 (259)
Q Consensus       233 ~~~G~~l~~dgG~~~~~  249 (259)
                      ...+..+++.+|..++.
T Consensus       175 ~~~ggvyNIgsg~~~Si  191 (854)
T PRK05865        175 VIDSGPVNLAAPGELTF  191 (854)
T ss_pred             CcCCCeEEEECCCcccH
Confidence            22456899988876543

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.69  E-value=1.2e-15  Score=125.81  Aligned_cols=155  Identities=26%  Similarity=0.260  Sum_probs=121.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHH---HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARL---HEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG   77 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (259)
                      ++||||||+|.||.|++.+|.++|+.|+++|.-........   +++...+..+.+++.|+.|.+.+++++++.      
T Consensus         3 ~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~------   76 (343)
T KOG1371|consen    3 KHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV------   76 (343)
T ss_pred             cEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc------
Confidence            58999999999999999999999999999986333222222   222222568999999999999999999864      


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccC-----------CCC-
Q 024994           78 KLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR-----------GIP-  145 (259)
Q Consensus        78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~-----------~~~-  145 (259)
                      ++|.|+|.|+....+.    +.+...+.+..|+.+++.++...    ++.+-..+|+.||...+-           +.. 
T Consensus        77 ~fd~V~Hfa~~~~vge----S~~~p~~Y~~nNi~gtlnlLe~~----~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~  148 (343)
T KOG1371|consen   77 KFDAVMHFAALAAVGE----SMENPLSYYHNNIAGTLNLLEVM----KAHNVKALVFSSSATVYGLPTKVPITEEDPTDQ  148 (343)
T ss_pred             CCceEEeehhhhccch----hhhCchhheehhhhhHHHHHHHH----HHcCCceEEEecceeeecCcceeeccCcCCCCC
Confidence            6999999999865543    45555788899999999997776    666567888888865431           112 


Q ss_pred             CChhhhhhHHHHHHHHHHHHHHHc
Q 024994          146 SVSLYGAYKGAMNQLTKNLACEWA  169 (259)
Q Consensus       146 ~~~~Y~~sK~a~~~~~~~~a~e~~  169 (259)
                      +...|+.+|.+++...+.+...+.
T Consensus       149 p~~pyg~tK~~iE~i~~d~~~~~~  172 (343)
T KOG1371|consen  149 PTNPYGKTKKAIEEIIHDYNKAYG  172 (343)
T ss_pred             CCCcchhhhHHHHHHHHhhhcccc
Confidence            567899999999999999987763

>PLN02996 fatty acyl-CoA reductase

Probab=99.68  E-value=1.3e-14  Score=130.73  Aligned_cols=221  Identities=19%  Similarity=0.140  Sum_probs=143.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC---EEEEeeCChhH---HHHHHHHHH---------h-c--------CCcEEEEEe
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA---IVHTCSRNQIE---LDARLHEWK---------N-K--------GFKVTGSVC   56 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~---~V~~~~r~~~~---~~~~~~~~~---------~-~--------~~~~~~~~~   56 (259)
                      |+++||||||+||++++..|++.+.   +|+++.|....   .+.+..++.         + .        ..++.++.+
T Consensus        12 k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i~G   91 (491)
T PLN02996         12 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPVPG   91 (491)
T ss_pred             CeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEEec
Confidence            7899999999999999999998653   67888886531   112111110         0 0        157899999


Q ss_pred             cCCC-------HHHHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCC
Q 024994           57 DLSS-------REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGN  129 (259)
Q Consensus        57 D~~~-------~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~  129 (259)
                      |+++       .+..+.++        ..+|+|||+|+.....       ++.+..+++|+.++..+++++...   .+.
T Consensus        92 Dl~~~~LGLs~~~~~~~l~--------~~vD~ViH~AA~v~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~~~  153 (491)
T PLN02996         92 DISYDDLGVKDSNLREEMW--------KEIDIVVNLAATTNFD-------ERYDVALGINTLGALNVLNFAKKC---VKV  153 (491)
T ss_pred             ccCCcCCCCChHHHHHHHH--------hCCCEEEECccccCCc-------CCHHHHHHHHHHHHHHHHHHHHhc---CCC
Confidence            9983       33344443        2689999999975321       235668889999999999887321   234


Q ss_pred             CEEEEecCCCccCC---------CC-----------------------------------------------------CC
Q 024994          130 GSIVFISSVGGVRG---------IP-----------------------------------------------------SV  147 (259)
Q Consensus       130 ~~ii~isS~~~~~~---------~~-----------------------------------------------------~~  147 (259)
                      .+++++||...+-.         .+                                                     ..
T Consensus       154 k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  233 (491)
T PLN02996        154 KMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWP  233 (491)
T ss_pred             CeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCC
Confidence            68999999653311         00                                                     12


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCc----hHHHHhhhhcCC---------CCCCC
Q 024994          148 SLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEG----SEFLDGIARQTP---------IGRAG  214 (259)
Q Consensus       148 ~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~----~~~~~~~~~~~~---------~~~~~  214 (259)
                      ..|+.||++.+.+++.++     .++.+..++|+.|.++.....+.-.+.    ......+.....         ..-+.
T Consensus       234 n~Y~~TK~~aE~lv~~~~-----~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v  308 (491)
T PLN02996        234 NTYVFTKAMGEMLLGNFK-----ENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVI  308 (491)
T ss_pred             CchHhhHHHHHHHHHHhc-----CCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeeccee
Confidence            359999999999997652     279999999999999875443221111    011111111111         12245


Q ss_pred             CHHHHHHHHHHHhCCCC-CCccccEEEeCCC
Q 024994          215 EPDEVSSLVAFLCLPAA-SYITGQIICVDGG  244 (259)
Q Consensus       215 ~~~~va~~~~~l~~~~~-~~~~G~~l~~dgG  244 (259)
                      ++++++++++..+.... ..-.++++++.+|
T Consensus       309 ~Vddvv~a~l~a~~~~~~~~~~~~vYNi~s~  339 (491)
T PLN02996        309 PADMVVNAMIVAMAAHAGGQGSEIIYHVGSS  339 (491)
T ss_pred             cccHHHHHHHHHHHHhhccCCCCcEEEecCC
Confidence            67999999877765321 1124688999988

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=99.67  E-value=4.3e-14  Score=105.20  Aligned_cols=217  Identities=18%  Similarity=0.147  Sum_probs=163.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC-CCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ-GKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~~i   79 (259)
                      .+++|-||-|.+|.+++.+|..++|.|.-++-.++...          +.-..+..|-+=.++-+.+++++-+.++ .++
T Consensus         4 grVivYGGkGALGSacv~~FkannywV~siDl~eNe~A----------d~sI~V~~~~swtEQe~~v~~~vg~sL~gekv   73 (236)
T KOG4022|consen    4 GRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQA----------DSSILVDGNKSWTEQEQSVLEQVGSSLQGEKV   73 (236)
T ss_pred             ceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccc----------cceEEecCCcchhHHHHHHHHHHHHhhccccc
Confidence            37899999999999999999999999988886543321          1233445555556777788888877764 479


Q ss_pred             cEEEEcCCCCCCCCCCCCC-HHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           80 NILINNAAIAFVKPTVDIT-AEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~-~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      |.||+-||.+..+....-+ .++.+-|+...+.......+.+..+++.  +|-+-..+...+.-+.|++..|+.+|+|++
T Consensus        74 Dav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~--GGLL~LtGAkaAl~gTPgMIGYGMAKaAVH  151 (236)
T KOG4022|consen   74 DAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKP--GGLLQLTGAKAALGGTPGMIGYGMAKAAVH  151 (236)
T ss_pred             ceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCC--CceeeecccccccCCCCcccchhHHHHHHH
Confidence            9999999998666443222 4455566777777766666666555543  466666666778889999999999999999


Q ss_pred             HHHHHHHHHH--ccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccc
Q 024994          159 QLTKNLACEW--AKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG  236 (259)
Q Consensus       159 ~~~~~~a~e~--~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G  236 (259)
                      .++++++.+-  -|.|--+..|.|=.++|||.++.+++.+             +..+-+.+++.+.++....+.++.-+|
T Consensus       152 qLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~AD-------------fssWTPL~fi~e~flkWtt~~~RPssG  218 (236)
T KOG4022|consen  152 QLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPNAD-------------FSSWTPLSFISEHFLKWTTETSRPSSG  218 (236)
T ss_pred             HHHHHhcccccCCCCCceeEEEeeeeccCccccccCCCCc-------------ccCcccHHHHHHHHHHHhccCCCCCCC
Confidence            9999998773  2346678899999999999998877654             334556799999998888888888888


Q ss_pred             cEEEeC
Q 024994          237 QIICVD  242 (259)
Q Consensus       237 ~~l~~d  242 (259)
                      ..+.+-
T Consensus       219 sLlqi~  224 (236)
T KOG4022|consen  219 SLLQIT  224 (236)
T ss_pred             ceEEEE
Confidence            877654

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.66  E-value=1.6e-14  Score=113.69  Aligned_cols=173  Identities=18%  Similarity=0.132  Sum_probs=124.9

Q ss_pred             EEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCccEE
Q 024994            3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNIL   82 (259)
Q Consensus         3 ~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~v   82 (259)
                      |+|+||||.+|+.++++|.++|++|+++.|+.++.+.        ..++.++++|+.|.+++.+++        .+.|.|
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--------~~~~~~~~~d~~d~~~~~~al--------~~~d~v   64 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--------SPGVEIIQGDLFDPDSVKAAL--------KGADAV   64 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--------CTTEEEEESCTTCHHHHHHHH--------TTSSEE
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--------ccccccceeeehhhhhhhhhh--------hhcchh
Confidence            7999999999999999999999999999999998766        448999999999998888877        379999


Q ss_pred             EEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCC---------hhhhhh
Q 024994           83 INNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSV---------SLYGAY  153 (259)
Q Consensus        83 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~---------~~Y~~s  153 (259)
                      |+++|....         +            ...++.++..+++.+..+++++||.......+..         ..|...
T Consensus        65 i~~~~~~~~---------~------------~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (183)
T PF13460_consen   65 IHAAGPPPK---------D------------VDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARD  123 (183)
T ss_dssp             EECCHSTTT---------H------------HHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHH
T ss_pred             hhhhhhhcc---------c------------ccccccccccccccccccceeeeccccCCCCCcccccccccchhhhHHH
Confidence            999985422         0            3344455555577777899999998766543331         245555


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhC
Q 024994          154 KGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCL  228 (259)
Q Consensus       154 K~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  228 (259)
                      |...+.+.       ...+++.+.++|+.+..+..........         .........+.+|+|++++.++.
T Consensus       124 ~~~~e~~~-------~~~~~~~~ivrp~~~~~~~~~~~~~~~~---------~~~~~~~~i~~~DvA~~~~~~l~  182 (183)
T PF13460_consen  124 KREAEEAL-------RESGLNWTIVRPGWIYGNPSRSYRLIKE---------GGPQGVNFISREDVAKAIVEALE  182 (183)
T ss_dssp             HHHHHHHH-------HHSTSEEEEEEESEEEBTTSSSEEEESS---------TSTTSHCEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHH-------HhcCCCEEEEECcEeEeCCCcceeEEec---------cCCCCcCcCCHHHHHHHHHHHhC
Confidence            55544333       3348999999999998886432111000         11111245578999999987763

...

>PLN02778 3,5-epimerase/4-reductase

Probab=99.63  E-value=7.8e-14  Score=118.26  Aligned_cols=195  Identities=19%  Similarity=0.142  Sum_probs=121.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+|+||.+++++|.++|++|+...                        .|++|.+.+...++.      .++|
T Consensus        10 ~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~------------------------~~~~~~~~v~~~l~~------~~~D   59 (298)
T PLN02778         10 LKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS------------------------GRLENRASLEADIDA------VKPT   59 (298)
T ss_pred             CeEEEECCCCHHHHHHHHHHHhCCCEEEEec------------------------CccCCHHHHHHHHHh------cCCC
Confidence            6899999999999999999999999987432                        234455555444442      2699


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCcc--------------C----
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV--------------R----  142 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~--------------~----  142 (259)
                      +|||+|+...... .+...++..+.+++|+.++..+++++    ++.+. +++++||.+.+              .    
T Consensus        60 ~ViH~Aa~~~~~~-~~~~~~~p~~~~~~Nv~gt~~ll~aa----~~~gv-~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~  133 (298)
T PLN02778         60 HVFNAAGVTGRPN-VDWCESHKVETIRANVVGTLTLADVC----RERGL-VLTNYATGCIFEYDDAHPLGSGIGFKEEDT  133 (298)
T ss_pred             EEEECCcccCCCC-chhhhhCHHHHHHHHHHHHHHHHHHH----HHhCC-CEEEEecceEeCCCCCCCcccCCCCCcCCC
Confidence            9999999764221 11223445678899999999999998    34333 45556553211              0    


Q ss_pred             CCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCC---C-CCCCCHHH
Q 024994          143 GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTP---I-GRAGEPDE  218 (259)
Q Consensus       143 ~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~  218 (259)
                      +.++...|+.||.+.+.+++.++..+   ++|+     +....+..      .....+...+....+   . ..+...+|
T Consensus       134 p~~~~s~Yg~sK~~~E~~~~~y~~~~---~lr~-----~~~~~~~~------~~~~~fi~~~~~~~~~~~~~~s~~yv~D  199 (298)
T PLN02778        134 PNFTGSFYSKTKAMVEELLKNYENVC---TLRV-----RMPISSDL------SNPRNFITKITRYEKVVNIPNSMTILDE  199 (298)
T ss_pred             CCCCCCchHHHHHHHHHHHHHhhccE---Eeee-----cccCCccc------ccHHHHHHHHHcCCCeeEcCCCCEEHHH
Confidence            11123579999999999998875322   4443     22111100      000112333332221   2 22667899


Q ss_pred             HHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          219 VSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       219 va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      ++++++.++...   .. ..+++.++..+++
T Consensus       200 ~v~al~~~l~~~---~~-g~yNigs~~~iS~  226 (298)
T PLN02778        200 LLPISIEMAKRN---LT-GIYNFTNPGVVSH  226 (298)
T ss_pred             HHHHHHHHHhCC---CC-CeEEeCCCCcccH
Confidence            999988887532   23 4899988776543

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.62  E-value=1.9e-14  Score=122.49  Aligned_cols=223  Identities=17%  Similarity=0.202  Sum_probs=153.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCC--CEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFG--AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      .++|||||+|++|.+++++|.+++  ..|.++|.......-..+.+.....++.++++|+.|..++.++++        +
T Consensus         5 ~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~--------~   76 (361)
T KOG1430|consen    5 LSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQ--------G   76 (361)
T ss_pred             CEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhcc--------C
Confidence            379999999999999999999999  689999987653211122222235689999999999999888775        4


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCC------------CC-
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG------------IP-  145 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~------------~~-  145 (259)
                      . .|+|+|....+.    .-..+.+..+++|+.|+..+++++    .+.+..++|++||....++            .| 
T Consensus        77 ~-~Vvh~aa~~~~~----~~~~~~~~~~~vNV~gT~nvi~~c----~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~  147 (361)
T KOG1430|consen   77 A-VVVHCAASPVPD----FVENDRDLAMRVNVNGTLNVIEAC----KELGVKRLIYTSSAYVVFGGEPIINGDESLPYPL  147 (361)
T ss_pred             c-eEEEeccccCcc----ccccchhhheeecchhHHHHHHHH----HHhCCCEEEEecCceEEeCCeecccCCCCCCCcc
Confidence            5 777777754332    233356778889999999998888    6777889999999765432            22 


Q ss_pred             -CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCC---CCC------CC
Q 024994          146 -SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPI---GRA------GE  215 (259)
Q Consensus       146 -~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---~~~------~~  215 (259)
                       ....|+.||+-.|.+++..+.   .......+++|..|++|.-+...+.     ..+.+...-..   +..      ..
T Consensus       148 ~~~d~Y~~sKa~aE~~Vl~an~---~~~l~T~aLR~~~IYGpgd~~~~~~-----i~~~~~~g~~~f~~g~~~~~~~~~~  219 (361)
T KOG1430|consen  148 KHIDPYGESKALAEKLVLEANG---SDDLYTCALRPPGIYGPGDKRLLPK-----IVEALKNGGFLFKIGDGENLNDFTY  219 (361)
T ss_pred             ccccccchHHHHHHHHHHHhcC---CCCeeEEEEccccccCCCCccccHH-----HHHHHHccCceEEeeccccccceEE
Confidence             235899999999999988854   4468999999999999987654321     11221111111   111      11


Q ss_pred             HH--HHHHHHHHHh-CCCCCCccccEEEeCCCceee
Q 024994          216 PD--EVSSLVAFLC-LPAASYITGQIICVDGGVTVT  248 (259)
Q Consensus       216 ~~--~va~~~~~l~-~~~~~~~~G~~l~~dgG~~~~  248 (259)
                      .+  ..+..+.... .+.+...+||.+.+.-|....
T Consensus       220 ~~Nva~ahilA~~aL~~~~~~~~Gq~yfI~d~~p~~  255 (361)
T KOG1430|consen  220 GENVAWAHILAARALLDKSPSVNGQFYFITDDTPVR  255 (361)
T ss_pred             echhHHHHHHHHHHHHhcCCccCceEEEEeCCCcch
Confidence            12  2222222222 226678999999998876553

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.61  E-value=5.6e-15  Score=124.49  Aligned_cols=200  Identities=21%  Similarity=0.202  Sum_probs=130.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++||||++|.||.++.++|.++|+.|+.+.|+                     .+|++|.+.+.+.+++.      ++|
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~---------------------~~dl~d~~~~~~~~~~~------~pd   53 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRS---------------------DLDLTDPEAVAKLLEAF------KPD   53 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT---------------------CS-TTSHHHHHHHHHHH--------S
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch---------------------hcCCCCHHHHHHHHHHh------CCC
Confidence            689999999999999999999999999999887                     58999999998888764      799


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCC-----------CCChh
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI-----------PSVSL  149 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~-----------~~~~~  149 (259)
                      +|||+|+.....    ...++.+..+.+|+.++..+++.+    .+. +.++|++||...+-+.           .+...
T Consensus        54 ~Vin~aa~~~~~----~ce~~p~~a~~iN~~~~~~la~~~----~~~-~~~li~~STd~VFdG~~~~~y~E~d~~~P~~~  124 (286)
T PF04321_consen   54 VVINCAAYTNVD----ACEKNPEEAYAINVDATKNLAEAC----KER-GARLIHISTDYVFDGDKGGPYTEDDPPNPLNV  124 (286)
T ss_dssp             EEEE------HH----HHHHSHHHHHHHHTHHHHHHHHHH----HHC-T-EEEEEEEGGGS-SSTSSSB-TTS----SSH
T ss_pred             eEeccceeecHH----hhhhChhhhHHHhhHHHHHHHHHH----HHc-CCcEEEeeccEEEcCCcccccccCCCCCCCCH
Confidence            999999975322    223455678889999999999988    443 5799999997544332           23578


Q ss_pred             hhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCC-------CCCCCHHHHHHH
Q 024994          150 YGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPI-------GRAGEPDEVSSL  222 (259)
Q Consensus       150 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~va~~  222 (259)
                      |+-+|...|.+++..   .    -+...++++++.++....+     .........+..++       ......+|+|+.
T Consensus       125 YG~~K~~~E~~v~~~---~----~~~~IlR~~~~~g~~~~~~-----~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~  192 (286)
T PF04321_consen  125 YGRSKLEGEQAVRAA---C----PNALILRTSWVYGPSGRNF-----LRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARV  192 (286)
T ss_dssp             HHHHHHHHHHHHHHH--------SSEEEEEE-SEESSSSSSH-----HHHHHHHHHCTSEEEEESSCEE--EEHHHHHHH
T ss_pred             HHHHHHHHHHHHHHh---c----CCEEEEecceecccCCCch-----hhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHH
Confidence            999999999887763   2    2788899999988722111     11122222222211       123357999999


Q ss_pred             HHHHhCCCC-CCccccEEEeCCCceee
Q 024994          223 VAFLCLPAA-SYITGQIICVDGGVTVT  248 (259)
Q Consensus       223 ~~~l~~~~~-~~~~G~~l~~dgG~~~~  248 (259)
                      +..++.... ......++++.|...++
T Consensus       193 i~~l~~~~~~~~~~~Giyh~~~~~~~S  219 (286)
T PF04321_consen  193 ILELIEKNLSGASPWGIYHLSGPERVS  219 (286)
T ss_dssp             HHHHHHHHHH-GGG-EEEE---BS-EE
T ss_pred             HHHHHHhcccccccceeEEEecCcccC
Confidence            998885331 11224588888877654

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.59  E-value=2.1e-13  Score=112.36  Aligned_cols=181  Identities=17%  Similarity=0.166  Sum_probs=133.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++||||++|-+|.++++.|. .++.|+.++|..                     +|++|.+.+.+++++.      ++|
T Consensus         1 M~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~---------------------~Ditd~~~v~~~i~~~------~PD   52 (281)
T COG1091           1 MKILITGANGQLGTELRRALP-GEFEVIATDRAE---------------------LDITDPDAVLEVIRET------RPD   52 (281)
T ss_pred             CcEEEEcCCChHHHHHHHHhC-CCceEEeccCcc---------------------ccccChHHHHHHHHhh------CCC
Confidence            469999999999999999999 778999998755                     7999999999999874      899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCC-----------CCChh
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI-----------PSVSL  149 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~-----------~~~~~  149 (259)
                      +|||+|++......    ..+-+..+.+|..++.++++++    .+. +..+|++|+-..+-|.           .+...
T Consensus        53 vVIn~AAyt~vD~a----E~~~e~A~~vNa~~~~~lA~aa----~~~-ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nv  123 (281)
T COG1091          53 VVINAAAYTAVDKA----ESEPELAFAVNATGAENLARAA----AEV-GARLVHISTDYVFDGEKGGPYKETDTPNPLNV  123 (281)
T ss_pred             EEEECccccccccc----cCCHHHHHHhHHHHHHHHHHHH----HHh-CCeEEEeecceEecCCCCCCCCCCCCCCChhh
Confidence            99999998655433    3345667789999999999998    443 5799999986544332           24678


Q ss_pred             hhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcC-------CCCCCCCHHHHHHH
Q 024994          150 YGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQT-------PIGRAGEPDEVSSL  222 (259)
Q Consensus       150 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~va~~  222 (259)
                      |+.||.+.|..++++.       -+...++..++.+....++..     .+.+...+..       .++.....+|+|++
T Consensus       124 YG~sKl~GE~~v~~~~-------~~~~I~Rtswv~g~~g~nFv~-----tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~  191 (281)
T COG1091         124 YGRSKLAGEEAVRAAG-------PRHLILRTSWVYGEYGNNFVK-----TMLRLAKEGKELKVVDDQYGSPTYTEDLADA  191 (281)
T ss_pred             hhHHHHHHHHHHHHhC-------CCEEEEEeeeeecCCCCCHHH-----HHHHHhhcCCceEEECCeeeCCccHHHHHHH
Confidence            9999999998888773       456677777777665433210     1122222221       22344567999999


Q ss_pred             HHHHhCCC
Q 024994          223 VAFLCLPA  230 (259)
Q Consensus       223 ~~~l~~~~  230 (259)
                      +..++...
T Consensus       192 i~~ll~~~  199 (281)
T COG1091         192 ILELLEKE  199 (281)
T ss_pred             HHHHHhcc
Confidence            99888644

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.58  E-value=1.1e-13  Score=114.45  Aligned_cols=167  Identities=19%  Similarity=0.155  Sum_probs=101.2

Q ss_pred             EEcCcchHHHHHHHHHHHCCC--EEEEeeCChhH---HHHHHHHHH----------hcCCcEEEEEecCCCHH--HHHHH
Q 024994            5 VTGGTRGIGHATVEELARFGA--IVHTCSRNQIE---LDARLHEWK----------NKGFKVTGSVCDLSSRE--QREKL   67 (259)
Q Consensus         5 ItG~s~giG~~~a~~l~~~G~--~V~~~~r~~~~---~~~~~~~~~----------~~~~~~~~~~~D~~~~~--~~~~~   67 (259)
                      ||||||+||.++..+|++++.  +|+.+.|..+.   .+.+.+.+.          ....++.++.+|++++.  --+..
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999987  89999997643   222322221          11568999999999853  11122


Q ss_pred             HHHHHHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCc--cCC--
Q 024994           68 IETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG--VRG--  143 (259)
Q Consensus        68 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~--~~~--  143 (259)
                      .+++.    ..+|+|||||+......       ..++..++|+.|+..+++.+    ...+..+++++||...  ...  
T Consensus        81 ~~~L~----~~v~~IiH~Aa~v~~~~-------~~~~~~~~NV~gt~~ll~la----~~~~~~~~~~iSTa~v~~~~~~~  145 (249)
T PF07993_consen   81 YQELA----EEVDVIIHCAASVNFNA-------PYSELRAVNVDGTRNLLRLA----AQGKRKRFHYISTAYVAGSRPGT  145 (249)
T ss_dssp             HHHHH----HH--EEEE--SS-SBS--------S--EEHHHHHHHHHHHHHHH----TSSS---EEEEEEGGGTTS-TTT
T ss_pred             hhccc----cccceeeecchhhhhcc-------cchhhhhhHHHHHHHHHHHH----HhccCcceEEeccccccCCCCCc
Confidence            22222    26899999999764321       23346679999999999988    4334459999999311  111  


Q ss_pred             ----------------CCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCC
Q 024994          144 ----------------IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK  189 (259)
Q Consensus       144 ----------------~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~  189 (259)
                                      ......|..||+..|.+++.++.+.   |+.+..++||.|.++-..
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~---g~p~~I~Rp~~i~g~~~~  204 (249)
T PF07993_consen  146 IEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRH---GLPVTIYRPGIIVGDSRT  204 (249)
T ss_dssp             --SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH------EEEEEE-EEE-SSSS
T ss_pred             ccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhcC---CceEEEEecCcccccCCC
Confidence                            0123589999999999999987664   899999999999874443

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.57  E-value=3.1e-14  Score=115.11  Aligned_cols=227  Identities=16%  Similarity=0.086  Sum_probs=150.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHH----HHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDAR----LHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ   76 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (259)
                      |++||||-||.-|..+|+.|+++|+.|..+.|+.+.....    .+.-.....++++..+|++|..++.++++++     
T Consensus         3 K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v-----   77 (345)
T COG1089           3 KVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV-----   77 (345)
T ss_pred             ceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc-----
Confidence            7899999999999999999999999999999875433211    1111122446889999999999999999876     


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCcc-----------CCCC
Q 024994           77 GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV-----------RGIP  145 (259)
Q Consensus        77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~-----------~~~~  145 (259)
                       .+|-|+|.|+.++.+    .+.++.+.+.+++..|+++++.+..-+-  ....++..-||+--+           .|+.
T Consensus        78 -~PdEIYNLaAQS~V~----vSFe~P~~T~~~~~iGtlrlLEaiR~~~--~~~~rfYQAStSE~fG~v~~~pq~E~TPFy  150 (345)
T COG1089          78 -QPDEIYNLAAQSHVG----VSFEQPEYTADVDAIGTLRLLEAIRILG--EKKTRFYQASTSELYGLVQEIPQKETTPFY  150 (345)
T ss_pred             -Cchhheecccccccc----ccccCcceeeeechhHHHHHHHHHHHhC--CcccEEEecccHHhhcCcccCccccCCCCC
Confidence             799999999987665    4556667788899999999998873222  224566666664211           3455


Q ss_pred             CChhhhhhHHHHHHHHHHHHHHHcc---CCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhh---------hcC-CCCC
Q 024994          146 SVSLYGAYKGAMNQLTKNLACEWAK---DNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIA---------RQT-PIGR  212 (259)
Q Consensus       146 ~~~~Y~~sK~a~~~~~~~~a~e~~~---~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~-~~~~  212 (259)
                      +.++|+++|.....++..++..|.-   .||-+|.=+|.  ..+.+    .-.........+.         .+. ...-
T Consensus       151 PrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~--Rge~F----VTRKIt~ava~Ik~G~q~~l~lGNldAkRD  224 (345)
T COG1089         151 PRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPL--RGETF----VTRKITRAVARIKLGLQDKLYLGNLDAKRD  224 (345)
T ss_pred             CCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCC--Cccce----ehHHHHHHHHHHHccccceEEecccccccc
Confidence            7789999999999999999888722   24444443332  11111    0000000011111         111 1223


Q ss_pred             CCCHHHHHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          213 AGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       213 ~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      ++.+.|-.++...++..+    ....+.+..|.+.++
T Consensus       225 WG~A~DYVe~mwlmLQq~----~PddyViATg~t~sV  257 (345)
T COG1089         225 WGHAKDYVEAMWLMLQQE----EPDDYVIATGETHSV  257 (345)
T ss_pred             ccchHHHHHHHHHHHccC----CCCceEEecCceeeH
Confidence            677788888766566533    246677777765543

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.57  E-value=6.4e-14  Score=113.29  Aligned_cols=224  Identities=16%  Similarity=0.066  Sum_probs=155.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHC--CCEEEEeeCChhH-HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024994            1 MTALVTGGTRGIGHATVEELARF--GAIVHTCSRNQIE-LDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG   77 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~--G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (259)
                      |.+|||||.|+||.+.+..++..  .++.+.++.-.-. -...+++. ....+..+++.|+.+...+..++..      .
T Consensus         7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~-~n~p~ykfv~~di~~~~~~~~~~~~------~   79 (331)
T KOG0747|consen    7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPV-RNSPNYKFVEGDIADADLVLYLFET------E   79 (331)
T ss_pred             ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhh-ccCCCceEeeccccchHHHHhhhcc------C
Confidence            68999999999999999999887  3455554431100 01222222 2255899999999998887777653      4


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccC------------CCC
Q 024994           78 KLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR------------GIP  145 (259)
Q Consensus        78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~------------~~~  145 (259)
                      ++|.|+|-|...+......    +--...+.|++++..+++...-..   +-.++|.+|+...+-            ...
T Consensus        80 ~id~vihfaa~t~vd~s~~----~~~~~~~nnil~t~~Lle~~~~sg---~i~~fvhvSTdeVYGds~~~~~~~E~s~~n  152 (331)
T KOG0747|consen   80 EIDTVIHFAAQTHVDRSFG----DSFEFTKNNILSTHVLLEAVRVSG---NIRRFVHVSTDEVYGDSDEDAVVGEASLLN  152 (331)
T ss_pred             chhhhhhhHhhhhhhhhcC----chHHHhcCCchhhhhHHHHHHhcc---CeeEEEEecccceecCccccccccccccCC
Confidence            7999999999765432222    223445689999999998884332   357999999964321            123


Q ss_pred             CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCC---------CCCCCCH
Q 024994          146 SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTP---------IGRAGEP  216 (259)
Q Consensus       146 ~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~  216 (259)
                      +...|+++|+|.+++.+|+...|   |+.+..++-+.|++|.+.....-+   .+........+         ...++..
T Consensus       153 PtnpyAasKaAaE~~v~Sy~~sy---~lpvv~~R~nnVYGP~q~~~klip---kFi~l~~~~~~~~i~g~g~~~rs~l~v  226 (331)
T KOG0747|consen  153 PTNPYAASKAAAEMLVRSYGRSY---GLPVVTTRMNNVYGPNQYPEKLIP---KFIKLAMRGKEYPIHGDGLQTRSYLYV  226 (331)
T ss_pred             CCCchHHHHHHHHHHHHHHhhcc---CCcEEEEeccCccCCCcChHHHhH---HHHHHHHhCCCcceecCcccceeeEeH
Confidence            46789999999999999998887   899999999999999875432111   12221222222         2235568


Q ss_pred             HHHHHHHHHHhCCCCCCccccEEEeCCCcee
Q 024994          217 DEVSSLVAFLCLPAASYITGQIICVDGGVTV  247 (259)
Q Consensus       217 ~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~  247 (259)
                      +|+.+++...+..   .-.|+++++..-..+
T Consensus       227 eD~~ea~~~v~~K---g~~geIYNIgtd~e~  254 (331)
T KOG0747|consen  227 EDVSEAFKAVLEK---GELGEIYNIGTDDEM  254 (331)
T ss_pred             HHHHHHHHHHHhc---CCccceeeccCcchh
Confidence            9999999888754   237999999765544

>PRK12320 hypothetical protein; Provisional

Probab=99.54  E-value=7.6e-13  Score=122.18  Aligned_cols=190  Identities=16%  Similarity=0.202  Sum_probs=126.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+|+||++++++|.++|++|++++|.....         ....+.++++|+++.. +.+++        .++|
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~---------~~~~ve~v~~Dl~d~~-l~~al--------~~~D   62 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA---------LDPRVDYVCASLRNPV-LQELA--------GEAD   62 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc---------ccCCceEEEccCCCHH-HHHHh--------cCCC
Confidence            6899999999999999999999999999999865321         1235788999999873 33332        3689


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +|||+|+....      .      ...+|+.++.++++++    ++.+ .++|++||..+   .+  ..|.    ..+.+
T Consensus        63 ~VIHLAa~~~~------~------~~~vNv~Gt~nLleAA----~~~G-vRiV~~SS~~G---~~--~~~~----~aE~l  116 (699)
T PRK12320         63 AVIHLAPVDTS------A------PGGVGITGLAHVANAA----ARAG-ARLLFVSQAAG---RP--ELYR----QAETL  116 (699)
T ss_pred             EEEEcCccCcc------c------hhhHHHHHHHHHHHHH----HHcC-CeEEEEECCCC---CC--cccc----HHHHH
Confidence            99999986311      1      1147999999998887    4444 48999998643   21  1232    12222


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCC---CCCHHHHHHHHHHHhCCCCCCcccc
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGR---AGEPDEVSSLVAFLCLPAASYITGQ  237 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~va~~~~~l~~~~~~~~~G~  237 (259)
                      .    .+   .++.+..++|++++++......     ......+......+.   ....+|++++++.+++..   .+| 
T Consensus       117 l----~~---~~~p~~ILR~~nVYGp~~~~~~-----~r~I~~~l~~~~~~~pI~vIyVdDvv~alv~al~~~---~~G-  180 (699)
T PRK12320        117 V----ST---GWAPSLVIRIAPPVGRQLDWMV-----CRTVATLLRSKVSARPIRVLHLDDLVRFLVLALNTD---RNG-  180 (699)
T ss_pred             H----Hh---cCCCEEEEeCceecCCCCcccH-----hHHHHHHHHHHHcCCceEEEEHHHHHHHHHHHHhCC---CCC-
Confidence            2    11   3588999999999998432110     012222211111122   247899999998887532   245 


Q ss_pred             EEEeCCCceeeec
Q 024994          238 IICVDGGVTVTVN  250 (259)
Q Consensus       238 ~l~~dgG~~~~~~  250 (259)
                      ++++.||..+++.
T Consensus       181 iyNIG~~~~~Si~  193 (699)
T PRK12320        181 VVDLATPDTTNVV  193 (699)
T ss_pred             EEEEeCCCeeEHH
Confidence            9999999887753

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.53  E-value=8.9e-12  Score=103.66  Aligned_cols=183  Identities=15%  Similarity=0.116  Sum_probs=149.4

Q ss_pred             EEEEEcC-cchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC---
Q 024994            2 TALVTGG-TRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG---   77 (259)
Q Consensus         2 ~~lItG~-s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~---   77 (259)
                      +|||.|. +.-|++.+|.-|-++|+.|+++..+.+..+....+.   ...+.....|..+..++...+.+..+.+..   
T Consensus         5 vVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~---~~dI~~L~ld~~~~~~~~~~l~~f~~~L~~p~~   81 (299)
T PF08643_consen    5 VVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESED---RPDIRPLWLDDSDPSSIHASLSRFASLLSRPHV   81 (299)
T ss_pred             EEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhcc---CCCCCCcccCCCCCcchHHHHHHHHHHhcCCCC
Confidence            6888885 899999999999999999999999988766554432   335777778887777777777777766521   


Q ss_pred             ----------CccEEEEcCCCC-CCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC--CCCEEEEec-CCCccCC
Q 024994           78 ----------KLNILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS--GNGSIVFIS-SVGGVRG  143 (259)
Q Consensus        78 ----------~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~ii~is-S~~~~~~  143 (259)
                                .+..||...... ..+|++.++.++|.+.++.|+..++.+++.++|+++.+  ++.++|.+. |+.....
T Consensus        82 p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~ssl~  161 (299)
T PF08643_consen   82 PFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSISSSLN  161 (299)
T ss_pred             CCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchhhccC
Confidence                      345566655543 45789999999999999999999999999999999872  356666655 5667778


Q ss_pred             CCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCC
Q 024994          144 IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM  187 (259)
Q Consensus       144 ~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~  187 (259)
                      .|.++.-.....++.+|.++|++|+.+.+|.|..++.|.++-..
T Consensus       162 ~PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l~i~~  205 (299)
T PF08643_consen  162 PPFHSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNLDIGN  205 (299)
T ss_pred             CCccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeeecccc
Confidence            88899999999999999999999999999999999999997763

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.53  E-value=2.6e-12  Score=129.54  Aligned_cols=226  Identities=16%  Similarity=0.155  Sum_probs=145.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCC----CEEEEeeCChhHHH---HHHHHHHhc-------CCcEEEEEecCCCHHHH--
Q 024994            1 MTALVTGGTRGIGHATVEELARFG----AIVHTCSRNQIELD---ARLHEWKNK-------GFKVTGSVCDLSSREQR--   64 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G----~~V~~~~r~~~~~~---~~~~~~~~~-------~~~~~~~~~D~~~~~~~--   64 (259)
                      |+++|||++|+||.+++++|++++    ++|+.+.|+.....   .+...+...       ..++.++.+|+++..--  
T Consensus       972 ~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl~ 1051 (1389)
T TIGR03443       972 ITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGLS 1051 (1389)
T ss_pred             ceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCcC
Confidence            579999999999999999999987    78999999754332   222212111       23688999999854110  


Q ss_pred             HHHHHHHHHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCC-
Q 024994           65 EKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-  143 (259)
Q Consensus        65 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~-  143 (259)
                      ....+++   . ..+|++||+|+....    ..+   .......|+.++..+++.+    .+.+..+++++||.+.+.+ 
T Consensus      1052 ~~~~~~l---~-~~~d~iiH~Aa~~~~----~~~---~~~~~~~nv~gt~~ll~~a----~~~~~~~~v~vSS~~v~~~~ 1116 (1389)
T TIGR03443      1052 DEKWSDL---T-NEVDVIIHNGALVHW----VYP---YSKLRDANVIGTINVLNLC----AEGKAKQFSFVSSTSALDTE 1116 (1389)
T ss_pred             HHHHHHH---H-hcCCEEEECCcEecC----ccC---HHHHHHhHHHHHHHHHHHH----HhCCCceEEEEeCeeecCcc
Confidence            1112222   1 369999999997532    112   3334567999999999887    3444568999999654310 


Q ss_pred             ----------------C-----------CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCC
Q 024994          144 ----------------I-----------PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPE  196 (259)
Q Consensus       144 ----------------~-----------~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~  196 (259)
                                      .           .....|+.||.+.+.+++.++.    .|++++.++||.|.++..........
T Consensus      1117 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~----~g~~~~i~Rpg~v~G~~~~g~~~~~~ 1192 (1389)
T TIGR03443      1117 YYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK----RGLRGCIVRPGYVTGDSKTGATNTDD 1192 (1389)
T ss_pred             cccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh----CCCCEEEECCCccccCCCcCCCCchh
Confidence                            0           0124599999999999887643    38999999999998875433221111


Q ss_pred             chHHHHhhhh------cCCC----CCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCceee
Q 024994          197 GSEFLDGIAR------QTPI----GRAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVT  248 (259)
Q Consensus       197 ~~~~~~~~~~------~~~~----~~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~  248 (259)
                         +...+..      ..|.    .-+.+.++++++++.++........+.++++.++..++
T Consensus      1193 ---~~~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~ 1251 (1389)
T TIGR03443      1193 ---FLLRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIR 1251 (1389)
T ss_pred             ---HHHHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCc
Confidence               2111111      1121    22557899999998887543322345678887775543

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.52  E-value=4.9e-13  Score=112.66  Aligned_cols=199  Identities=13%  Similarity=0.011  Sum_probs=122.6

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC-cc
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK-LN   80 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~-id   80 (259)
                      ++|||||||.||++++++|.++|++|.+++|+.++...         ..+..+.+|+.|.+++..+++.. +.+ .. +|
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~---------~~~~~~~~d~~d~~~l~~a~~~~-~~~-~g~~d   69 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAG---------PNEKHVKFDWLDEDTWDNPFSSD-DGM-EPEIS   69 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccC---------CCCccccccCCCHHHHHHHHhcc-cCc-CCcee
Confidence            48999999999999999999999999999999875421         24556689999999999888643 222 24 89


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      .++++++...       .  ..+        ..    +.++...++.+-.+||++||.....+.+       .+..++.+
T Consensus        70 ~v~~~~~~~~-------~--~~~--------~~----~~~i~aa~~~gv~~~V~~Ss~~~~~~~~-------~~~~~~~~  121 (285)
T TIGR03649        70 AVYLVAPPIP-------D--LAP--------PM----IKFIDFARSKGVRRFVLLSASIIEKGGP-------AMGQVHAH  121 (285)
T ss_pred             EEEEeCCCCC-------C--hhH--------HH----HHHHHHHHHcCCCEEEEeeccccCCCCc-------hHHHHHHH
Confidence            9999887421       0  001        11    1233334666678999999865433311       22222222


Q ss_pred             HHHHHHHHcc-CCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          161 TKNLACEWAK-DNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       161 ~~~~a~e~~~-~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      .       .. .|+..+.++|+++..++..............-..........+.+++|+++++..++.+..  ..|..+
T Consensus       122 l-------~~~~gi~~tilRp~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~~--~~~~~~  192 (285)
T TIGR03649       122 L-------DSLGGVEYTVLRPTWFMENFSEEFHVEAIRKENKIYSATGDGKIPFVSADDIARVAYRALTDKV--APNTDY  192 (285)
T ss_pred             H-------HhccCCCEEEEeccHHhhhhcccccccccccCCeEEecCCCCccCcccHHHHHHHHHHHhcCCC--cCCCeE
Confidence            1       22 3899999999988766532211100000000000000111236688999999988886432  235667


Q ss_pred             EeCCCceee
Q 024994          240 CVDGGVTVT  248 (259)
Q Consensus       240 ~~dgG~~~~  248 (259)
                      ++-|+..++
T Consensus       193 ~l~g~~~~s  201 (285)
T TIGR03649       193 VVLGPELLT  201 (285)
T ss_pred             EeeCCccCC
Confidence            777766554

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.51  E-value=8.2e-13  Score=111.34  Aligned_cols=211  Identities=14%  Similarity=0.048  Sum_probs=122.0

Q ss_pred             EEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCccEE
Q 024994            3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNIL   82 (259)
Q Consensus         3 ~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~v   82 (259)
                      +|||||+|.||.+++++|+++|++|++++|+.+......        ...  ..|+.. ..       ..+.+ .++|+|
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~--~~~~~~-~~-------~~~~~-~~~D~V   61 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK--------WEG--YKPWAP-LA-------ESEAL-EGADAV   61 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc--------cee--eecccc-cc-------hhhhc-CCCCEE
Confidence            689999999999999999999999999999876543211        001  112221 11       11223 479999


Q ss_pred             EEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCC-C-EEEEecCCCccCCCC------------CCh
Q 024994           83 INNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGN-G-SIVFISSVGGVRGIP------------SVS  148 (259)
Q Consensus        83 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~-~ii~isS~~~~~~~~------------~~~  148 (259)
                      ||+|+.....  .+.+.+..+..++.|+.++..+++++    .+.+. . .+++.|+.. .++..            +..
T Consensus        62 vh~a~~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~~i~~S~~~-~yg~~~~~~~~E~~~~~~~~  134 (292)
T TIGR01777        62 INLAGEPIAD--KRWTEERKQEIRDSRIDTTRALVEAI----AAAEQKPKVFISASAVG-YYGTSEDRVFTEEDSPAGDD  134 (292)
T ss_pred             EECCCCCccc--ccCCHHHHHHHHhcccHHHHHHHHHH----HhcCCCceEEEEeeeEE-EeCCCCCCCcCcccCCCCCC
Confidence            9999964321  12345566678899999999998887    44432 2 344344322 22210            111


Q ss_pred             hhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhh-----hcCCCCCCCCHHHHHHHH
Q 024994          149 LYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIA-----RQTPIGRAGEPDEVSSLV  223 (259)
Q Consensus       149 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~va~~~  223 (259)
                      .|+..+...+...+    .+...++.++.++|+.+.++..... . .. ........     ......-+...+|+++++
T Consensus       135 ~~~~~~~~~e~~~~----~~~~~~~~~~ilR~~~v~G~~~~~~-~-~~-~~~~~~~~~~~~g~~~~~~~~i~v~Dva~~i  207 (292)
T TIGR01777       135 FLAELCRDWEEAAQ----AAEDLGTRVVLLRTGIVLGPKGGAL-A-KM-LPPFRLGLGGPLGSGRQWFSWIHIEDLVQLI  207 (292)
T ss_pred             hHHHHHHHHHHHhh----hchhcCCceEEEeeeeEECCCcchh-H-HH-HHHHhcCcccccCCCCcccccEeHHHHHHHH
Confidence            23333333333322    2233479999999999988742110 0 00 00000000     011112356789999999


Q ss_pred             HHHhCCCCCCccccEEEeCCCceeee
Q 024994          224 AFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       224 ~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      ..++....  .. .++++.++..+++
T Consensus       208 ~~~l~~~~--~~-g~~~~~~~~~~s~  230 (292)
T TIGR01777       208 LFALENAS--IS-GPVNATAPEPVRN  230 (292)
T ss_pred             HHHhcCcc--cC-CceEecCCCccCH
Confidence            98885422  23 4688877766543

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PLN00016 RNA-binding protein; Provisional

Probab=99.51  E-value=1.5e-12  Score=114.14  Aligned_cols=200  Identities=19%  Similarity=0.189  Sum_probs=127.1

Q ss_pred             CEEEEE----cCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHH-------HHHHhcCCcEEEEEecCCCHHHHHHHHH
Q 024994            1 MTALVT----GGTRGIGHATVEELARFGAIVHTCSRNQIELDARL-------HEWKNKGFKVTGSVCDLSSREQREKLIE   69 (259)
Q Consensus         1 k~~lIt----G~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~D~~~~~~~~~~~~   69 (259)
                      |+||||    ||+|.||.+++++|+++|++|++++|+........       .++.  ...+.++.+|+.|   +.+++.
T Consensus        53 ~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~v~~v~~D~~d---~~~~~~  127 (378)
T PLN00016         53 KKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELS--SAGVKTVWGDPAD---VKSKVA  127 (378)
T ss_pred             ceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhh--hcCceEEEecHHH---HHhhhc
Confidence            579999    99999999999999999999999999876432211       1221  1247788899876   333331


Q ss_pred             HHHHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCC--C-
Q 024994           70 TVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIP--S-  146 (259)
Q Consensus        70 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~--~-  146 (259)
                           . ..+|+|||+++.         +.           .++..+++++    .+.+-.++|++||...+....  + 
T Consensus       128 -----~-~~~d~Vi~~~~~---------~~-----------~~~~~ll~aa----~~~gvkr~V~~SS~~vyg~~~~~p~  177 (378)
T PLN00016        128 -----G-AGFDVVYDNNGK---------DL-----------DEVEPVADWA----KSPGLKQFLFCSSAGVYKKSDEPPH  177 (378)
T ss_pred             -----c-CCccEEEeCCCC---------CH-----------HHHHHHHHHH----HHcCCCEEEEEccHhhcCCCCCCCC
Confidence                 1 369999999762         11           1222344443    555667999999976532211  0 


Q ss_pred             -----ChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCC---------CC
Q 024994          147 -----VSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPI---------GR  212 (259)
Q Consensus       147 -----~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---------~~  212 (259)
                           ...+. +|...+.+.+       ..+++++.++|+.++++.....    ....+........+.         .-
T Consensus       178 ~E~~~~~p~~-sK~~~E~~l~-------~~~l~~~ilRp~~vyG~~~~~~----~~~~~~~~~~~~~~i~~~g~g~~~~~  245 (378)
T PLN00016        178 VEGDAVKPKA-GHLEVEAYLQ-------KLGVNWTSFRPQYIYGPGNNKD----CEEWFFDRLVRGRPVPIPGSGIQLTQ  245 (378)
T ss_pred             CCCCcCCCcc-hHHHHHHHHH-------HcCCCeEEEeceeEECCCCCCc----hHHHHHHHHHcCCceeecCCCCeeec
Confidence                 11122 7888776543       2489999999999998864321    111122222222111         12


Q ss_pred             CCCHHHHHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          213 AGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       213 ~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      +...+|+++++..++...  ...|+++++.++..+++
T Consensus       246 ~i~v~Dva~ai~~~l~~~--~~~~~~yni~~~~~~s~  280 (378)
T PLN00016        246 LGHVKDLASMFALVVGNP--KAAGQIFNIVSDRAVTF  280 (378)
T ss_pred             eecHHHHHHHHHHHhcCc--cccCCEEEecCCCccCH
Confidence            456899999998888542  34678999998876554

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.50  E-value=2e-12  Score=109.30  Aligned_cols=165  Identities=21%  Similarity=0.189  Sum_probs=121.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCC-CEEEEeeCChh---HHHHHHHHHH-------hcCCcEEEEEecCCC------HHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFG-AIVHTCSRNQI---ELDARLHEWK-------NKGFKVTGSVCDLSS------REQ   63 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G-~~V~~~~r~~~---~~~~~~~~~~-------~~~~~~~~~~~D~~~------~~~   63 (259)
                      |++++|||||++|..+...|+.+- .+|+...|-++   ..+++.+.+.       ....++..+..|++.      ...
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            689999999999999999998875 59999998554   3333333333       336789999999983      333


Q ss_pred             HHHHHHHHHHHcCCCccEEEEcCCCCC-CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccC
Q 024994           64 REKLIETVTSIFQGKLNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR  142 (259)
Q Consensus        64 ~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~  142 (259)
                      .+.+.        ..+|.||||++..+ ..|        ..+....|+.|+..+++.+    ...+...+.+|||++...
T Consensus        81 ~~~La--------~~vD~I~H~gA~Vn~v~p--------Ys~L~~~NVlGT~evlrLa----~~gk~Kp~~yVSsisv~~  140 (382)
T COG3320          81 WQELA--------ENVDLIIHNAALVNHVFP--------YSELRGANVLGTAEVLRLA----ATGKPKPLHYVSSISVGE  140 (382)
T ss_pred             HHHHh--------hhcceEEecchhhcccCc--------HHHhcCcchHhHHHHHHHH----hcCCCceeEEEeeeeecc
Confidence            33333        46999999999753 223        3455669999999999887    333345699999987432


Q ss_pred             CC--------------------CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCC
Q 024994          143 GI--------------------PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK  189 (259)
Q Consensus       143 ~~--------------------~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~  189 (259)
                      ..                    .....|+-||++.|-+++....    +|+++..++||.|-.+-..
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~----rGLpv~I~Rpg~I~gds~t  203 (382)
T COG3320         141 TEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGD----RGLPVTIFRPGYITGDSRT  203 (382)
T ss_pred             ccccCCCccccccccccccccCccCCCcchhHHHHHHHHHHHhh----cCCCeEEEecCeeeccCcc
Confidence            11                    1246899999999988887743    3999999999999766653

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.49  E-value=1.3e-12  Score=105.76  Aligned_cols=203  Identities=17%  Similarity=0.107  Sum_probs=144.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      ++++||||+|+||++++..|..+|+.|+++|--...-......+.. ..++..+..|+...     ++.        .+|
T Consensus        28 lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~-~~~fel~~hdv~~p-----l~~--------evD   93 (350)
T KOG1429|consen   28 LRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIG-HPNFELIRHDVVEP-----LLK--------EVD   93 (350)
T ss_pred             cEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhcc-CcceeEEEeechhH-----HHH--------Hhh
Confidence            5899999999999999999999999999998654443333332221 33566777777654     332        579


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCcc----------------CCC
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV----------------RGI  144 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~----------------~~~  144 (259)
                      .++|.|....+..+.-.+    .+++..|+.+++.++..+    ++. +.|++..|++..+                .|.
T Consensus        94 ~IyhLAapasp~~y~~np----vktIktN~igtln~lgla----krv-~aR~l~aSTseVYgdp~~hpq~e~ywg~vnpi  164 (350)
T KOG1429|consen   94 QIYHLAAPASPPHYKYNP----VKTIKTNVIGTLNMLGLA----KRV-GARFLLASTSEVYGDPLVHPQVETYWGNVNPI  164 (350)
T ss_pred             hhhhhccCCCCcccccCc----cceeeecchhhHHHHHHH----HHh-CceEEEeecccccCCcccCCCccccccccCcC
Confidence            999999987655443333    345669999999998877    333 4788887775432                122


Q ss_pred             CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCC---------CCC
Q 024994          145 PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGR---------AGE  215 (259)
Q Consensus       145 ~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~  215 (259)
                      .+.+.|...|...+.++..+.++.   ||-+...++.++++|.+.-.. +...+.+..+....-|+.-         +..
T Consensus       165 gpr~cydegKr~aE~L~~~y~k~~---giE~rIaRifNtyGPrm~~~d-grvvsnf~~q~lr~epltv~g~G~qtRSF~y  240 (350)
T KOG1429|consen  165 GPRSCYDEGKRVAETLCYAYHKQE---GIEVRIARIFNTYGPRMHMDD-GRVVSNFIAQALRGEPLTVYGDGKQTRSFQY  240 (350)
T ss_pred             CchhhhhHHHHHHHHHHHHhhccc---CcEEEEEeeecccCCccccCC-ChhhHHHHHHHhcCCCeEEEcCCcceEEEEe
Confidence            245789999999999999997665   999999999999999875433 3334445555555555433         344


Q ss_pred             HHHHHHHHHHHhCCC
Q 024994          216 PDEVSSLVAFLCLPA  230 (259)
Q Consensus       216 ~~~va~~~~~l~~~~  230 (259)
                      .+|..+.++.|+..+
T Consensus       241 vsD~Vegll~Lm~s~  255 (350)
T KOG1429|consen  241 VSDLVEGLLRLMESD  255 (350)
T ss_pred             HHHHHHHHHHHhcCC
Confidence            789999998888543

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.45  E-value=1.4e-11  Score=112.62  Aligned_cols=224  Identities=15%  Similarity=0.119  Sum_probs=138.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC---EEEEeeCChhH---HHHHHHHHH---------h-c--------CCcEEEEEe
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA---IVHTCSRNQIE---LDARLHEWK---------N-K--------GFKVTGSVC   56 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~---~V~~~~r~~~~---~~~~~~~~~---------~-~--------~~~~~~~~~   56 (259)
                      |+++||||||+||+.++++|++.+.   +|+++.|....   .+.+.+++.         + .        ..++..+..
T Consensus       120 k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v~G  199 (605)
T PLN02503        120 KNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPVVG  199 (605)
T ss_pred             CEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEEEe
Confidence            7899999999999999999998764   68888885432   222222221         1 0        247889999


Q ss_pred             cCCCHH------HHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCC
Q 024994           57 DLSSRE------QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNG  130 (259)
Q Consensus        57 D~~~~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~  130 (259)
                      |+++.+      ..+.+.        ..+|+|||+|+.....       ++.+..+++|+.++..+++.+...   ....
T Consensus       200 Dl~d~~LGLs~~~~~~L~--------~~vDiVIH~AA~v~f~-------~~~~~a~~vNV~GT~nLLelA~~~---~~lk  261 (605)
T PLN02503        200 NVCESNLGLEPDLADEIA--------KEVDVIINSAANTTFD-------ERYDVAIDINTRGPCHLMSFAKKC---KKLK  261 (605)
T ss_pred             eCCCcccCCCHHHHHHHH--------hcCCEEEECccccccc-------cCHHHHHHHHHHHHHHHHHHHHHc---CCCC
Confidence            999862      333222        2599999999975321       346677889999999999887321   1235


Q ss_pred             EEEEecCCCcc--C-------CCC--------------------------------------------------------
Q 024994          131 SIVFISSVGGV--R-------GIP--------------------------------------------------------  145 (259)
Q Consensus       131 ~ii~isS~~~~--~-------~~~--------------------------------------------------------  145 (259)
                      +++++||....  .       .++                                                        
T Consensus       262 ~fV~vSTayVyG~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~  341 (605)
T PLN02503        262 LFLQVSTAYVNGQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERA  341 (605)
T ss_pred             eEEEccCceeecCCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchh
Confidence            78998886422  1       111                                                        


Q ss_pred             ----CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchH----HHHhhhhcC-C-------
Q 024994          146 ----SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSE----FLDGIARQT-P-------  209 (259)
Q Consensus       146 ----~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~----~~~~~~~~~-~-------  209 (259)
                          ....|.-+|+..|.+++..+     .++.+..++|+.|.+.....++...+...    ....+.... +       
T Consensus       342 ~~~~~pNtYt~TK~lAE~lV~~~~-----~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~  416 (605)
T PLN02503        342 KLYGWQDTYVFTKAMGEMVINSMR-----GDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPN  416 (605)
T ss_pred             hhCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCC
Confidence                01357777777777776432     37999999999997655544432222110    011111000 0       


Q ss_pred             -CCCCCCHHHHHHHHHHHhCCC--CCCccccEEEeCCCcee
Q 024994          210 -IGRAGEPDEVSSLVAFLCLPA--ASYITGQIICVDGGVTV  247 (259)
Q Consensus       210 -~~~~~~~~~va~~~~~l~~~~--~~~~~G~~l~~dgG~~~  247 (259)
                       .--..++|.++++++..+...  .....++++++..+...
T Consensus       417 ~~~DiVPVD~vvna~i~a~a~~~~~~~~~~~vYn~ts~~~n  457 (605)
T PLN02503        417 GVLDVVPADMVVNATLAAMAKHGGAAKPEINVYQIASSVVN  457 (605)
T ss_pred             eeEeEEeecHHHHHHHHHHHhhhcccCCCCCEEEeCCCCCC
Confidence             001235688888877663211  12236899999887433

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.45  E-value=9.6e-12  Score=116.70  Aligned_cols=140  Identities=17%  Similarity=0.134  Sum_probs=98.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+|.||+++++.|.++|+.|..                        ...|++|.+.+.+.+++.      ++|
T Consensus       381 mkiLVtGa~G~iG~~l~~~L~~~g~~v~~------------------------~~~~l~d~~~v~~~i~~~------~pd  430 (668)
T PLN02260        381 LKFLIYGRTGWIGGLLGKLCEKQGIAYEY------------------------GKGRLEDRSSLLADIRNV------KPT  430 (668)
T ss_pred             ceEEEECCCchHHHHHHHHHHhCCCeEEe------------------------eccccccHHHHHHHHHhh------CCC
Confidence            57999999999999999999999988731                        113577777777666542      699


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccC-----------C------
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR-----------G------  143 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~-----------~------  143 (259)
                      +|||+|+..... ..+...++.++.+++|+.++..+++++    ++.+ .+++++||...+-           +      
T Consensus       431 ~Vih~Aa~~~~~-~~~~~~~~~~~~~~~N~~gt~~l~~a~----~~~g-~~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~  504 (668)
T PLN02260        431 HVFNAAGVTGRP-NVDWCESHKVETIRANVVGTLTLADVC----RENG-LLMMNFATGCIFEYDAKHPEGSGIGFKEEDK  504 (668)
T ss_pred             EEEECCcccCCC-CCChHHhCHHHHHHHHhHHHHHHHHHH----HHcC-CeEEEEcccceecCCcccccccCCCCCcCCC
Confidence            999999975421 122234456788899999999999998    4443 3566776643210           1      


Q ss_pred             -CCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEe
Q 024994          144 -IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA  179 (259)
Q Consensus       144 -~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~  179 (259)
                       .+....|+.||.+.+.+++.+...   ..+|+..+.
T Consensus       505 ~~~~~~~Yg~sK~~~E~~~~~~~~~---~~~r~~~~~  538 (668)
T PLN02260        505 PNFTGSFYSKTKAMVEELLREYDNV---CTLRVRMPI  538 (668)
T ss_pred             CCCCCChhhHHHHHHHHHHHhhhhh---eEEEEEEec
Confidence             122367999999999999887422   245555554

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.42  E-value=6.7e-11  Score=92.36  Aligned_cols=172  Identities=17%  Similarity=0.098  Sum_probs=118.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+++||||| |+|.++++.|+++|++|++++|+.+..+.+...+.. ..++.++++|++|.+++.++++.+.+.+ +++|
T Consensus         1 m~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~-~~~i~~~~~Dv~d~~sv~~~i~~~l~~~-g~id   77 (177)
T PRK08309          1 MHALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT-PESITPLPLDYHDDDALKLAIKSTIEKN-GPFD   77 (177)
T ss_pred             CEEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc-CCcEEEEEccCCCHHHHHHHHHHHHHHc-CCCe
Confidence            689999998 677779999999999999999998877666554543 4478889999999999999999998888 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      .+|+..-..                      ++-.+..++-..-.+.+.-+++.+-++.+..+                 
T Consensus        78 ~lv~~vh~~----------------------~~~~~~~~~~~~gv~~~~~~~~h~~gs~~~~~-----------------  118 (177)
T PRK08309         78 LAVAWIHSS----------------------AKDALSVVCRELDGSSETYRLFHVLGSAASDP-----------------  118 (177)
T ss_pred             EEEEecccc----------------------chhhHHHHHHHHccCCCCceEEEEeCCcCCch-----------------
Confidence            999776642                      22233333311111222347888775544211                 


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCC-CCCCcccc
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLP-AASYITGQ  237 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~-~~~~~~G~  237 (259)
                       +..+..+........-|..|++-.+-.                      .|+++-+|+++.+..-+.. .+..+.|+
T Consensus       119 -~~~~~~~~~~~~~~~~i~lgf~~~~~~----------------------~rwlt~~ei~~gv~~~~~~~~~~~~~g~  173 (177)
T PRK08309        119 -RIPSEKIGPARCSYRRVILGFVLEDTY----------------------SRWLTHEEISDGVIKAIESDADEHVVGT  173 (177)
T ss_pred             -hhhhhhhhhcCCceEEEEEeEEEeCCc----------------------cccCchHHHHHHHHHHHhcCCCeEEEEE
Confidence             112223344567788888898865432                      2666778888888766653 34455554

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.34  E-value=2.8e-11  Score=98.11  Aligned_cols=207  Identities=17%  Similarity=0.132  Sum_probs=121.6

Q ss_pred             EEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCccEE
Q 024994            3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNIL   82 (259)
Q Consensus         3 ~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~v   82 (259)
                      ++||||||.||++++..|.+.|+.|+++.|+..+.+...          +.   .+...+.+....+       .++|+|
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~----------~~---~v~~~~~~~~~~~-------~~~Dav   60 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNL----------HP---NVTLWEGLADALT-------LGIDAV   60 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhc----------Cc---cccccchhhhccc-------CCCCEE
Confidence            589999999999999999999999999999988765422          10   1111122222111       269999


Q ss_pred             EEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC-CCCEEEEecCCCccCCCCCChhhhhh----HHHH
Q 024994           83 INNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVGGVRGIPSVSLYGAY----KGAM  157 (259)
Q Consensus        83 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~isS~~~~~~~~~~~~Y~~s----K~a~  157 (259)
                      ||.||.......  ++.+.=+..+    .|.+..++.+.....+. .++++..=+|..++++......|.-.    .-.+
T Consensus        61 INLAG~~I~~rr--Wt~~~K~~i~----~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fl  134 (297)
T COG1090          61 INLAGEPIAERR--WTEKQKEEIR----QSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFL  134 (297)
T ss_pred             EECCCCcccccc--CCHHHHHHHH----HHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChH
Confidence            999997644432  3444444344    44455555555555533 34555555666677765443333222    2234


Q ss_pred             HHHHHHHHHHH---ccCCceEEEEeCCceeCCCC---CCCcCCCCchHHHHhhhhcCCC----CCCCCHHHHHHHHHHHh
Q 024994          158 NQLTKNLACEW---AKDNIRTNTVAPWVIKTSMI---KPFEEGPEGSEFLDGIARQTPI----GRAGEPDEVSSLVAFLC  227 (259)
Q Consensus       158 ~~~~~~~a~e~---~~~gi~v~~v~pg~v~t~~~---~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~va~~~~~l~  227 (259)
                      ..+++.+-.+.   ...|+||+.++-|.|-++--   ..+...     +.-..-.....    -.+...||+.+++.|++
T Consensus       135 a~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~-----fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll  209 (297)
T COG1090         135 AQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGALGKMLPL-----FKLGLGGKLGSGRQWFSWIHIEDLVNAILFLL  209 (297)
T ss_pred             HHHHHHHHHHHhhhhhcCceEEEEEEEEEecCCCcchhhhcch-----hhhccCCccCCCCceeeeeeHHHHHHHHHHHH
Confidence            45555554443   33589999999998855332   222111     11111111111    22556899999999999


Q ss_pred             CCCCCCccccEEEeCC
Q 024994          228 LPAASYITGQIICVDG  243 (259)
Q Consensus       228 ~~~~~~~~G~~l~~dg  243 (259)
                      ..  ..+.| .+|+.+
T Consensus       210 ~~--~~lsG-p~N~ta  222 (297)
T COG1090         210 EN--EQLSG-PFNLTA  222 (297)
T ss_pred             hC--cCCCC-cccccC
Confidence            64  34566 355544

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.33  E-value=4.8e-11  Score=106.99  Aligned_cols=157  Identities=18%  Similarity=0.263  Sum_probs=116.4

Q ss_pred             EEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCccEEE
Q 024994            4 LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILI   83 (259)
Q Consensus         4 lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~vi   83 (259)
                      +|+||++|+|.++++.|...|+.|+.+.+...+....      ..                            .+++.++
T Consensus        42 ~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~------~~----------------------------~~~~~~~   87 (450)
T PRK08261         42 VLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAG------WG----------------------------DRFGALV   87 (450)
T ss_pred             eEEccCchhHHHHHHHHhhCCCeeeecCccccccccC------cC----------------------------CcccEEE
Confidence            4888899999999999999999999887654411000      00                            2455444


Q ss_pred             EcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHHHHH
Q 024994           84 NNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKN  163 (259)
Q Consensus        84 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~  163 (259)
                      +.+...       .+.+++        .+.+.+++..++.|..  .++||+++|..+..   ....|+++|+++.+++|+
T Consensus        88 ~d~~~~-------~~~~~l--------~~~~~~~~~~l~~l~~--~griv~i~s~~~~~---~~~~~~~akaal~gl~rs  147 (450)
T PRK08261         88 FDATGI-------TDPADL--------KALYEFFHPVLRSLAP--CGRVVVLGRPPEAA---ADPAAAAAQRALEGFTRS  147 (450)
T ss_pred             EECCCC-------CCHHHH--------HHHHHHHHHHHHhccC--CCEEEEEccccccC---CchHHHHHHHHHHHHHHH
Confidence            333211       122232        2444667777777753  58999999977653   345699999999999999


Q ss_pred             HHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCC
Q 024994          164 LACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVDG  243 (259)
Q Consensus       164 ~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dg  243 (259)
                      +++|+ +++++++.+.|++                               ..++++++++.|++++.+.+++|+.+.+++
T Consensus       148 la~E~-~~gi~v~~i~~~~-------------------------------~~~~~~~~~~~~l~s~~~a~~~g~~i~~~~  195 (450)
T PRK08261        148 LGKEL-RRGATAQLVYVAP-------------------------------GAEAGLESTLRFFLSPRSAYVSGQVVRVGA  195 (450)
T ss_pred             HHHHh-hcCCEEEEEecCC-------------------------------CCHHHHHHHHHHhcCCccCCccCcEEEecC
Confidence            99999 7899999998874                               137889999999999999999999999998


Q ss_pred             Cce
Q 024994          244 GVT  246 (259)
Q Consensus       244 G~~  246 (259)
                      +..
T Consensus       196 ~~~  198 (450)
T PRK08261        196 ADA  198 (450)
T ss_pred             Ccc
Confidence            864

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.28  E-value=1.5e-11  Score=99.82  Aligned_cols=95  Identities=19%  Similarity=0.229  Sum_probs=75.1

Q ss_pred             CcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCccEEEEcCC
Q 024994            8 GTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAA   87 (259)
Q Consensus         8 ~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~vi~~ag   87 (259)
                      +|||||+++|++|+++|++|+++++... +       ....    ...+|+++.++++++++++.+.+ +++|++|||||
T Consensus        23 SSGgIG~AIA~~la~~Ga~Vvlv~~~~~-l-------~~~~----~~~~Dv~d~~s~~~l~~~v~~~~-g~iDiLVnnAg   89 (227)
T TIGR02114        23 STGHLGKIITETFLSAGHEVTLVTTKRA-L-------KPEP----HPNLSIREIETTKDLLITLKELV-QEHDILIHSMA   89 (227)
T ss_pred             cccHHHHHHHHHHHHCCCEEEEEcChhh-c-------cccc----CCcceeecHHHHHHHHHHHHHHc-CCCCEEEECCE
Confidence            3789999999999999999999886321 1       0000    13589999999999999999988 68999999999


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHhhHhHHHHHH
Q 024994           88 IAFVKPTVDITAEDMSTVSSTNFESVFHLSQ  118 (259)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  118 (259)
                      +....++.+.+.++|++++..   +.+.+.+
T Consensus        90 v~d~~~~~~~s~e~~~~~~~~---~~~~~~~  117 (227)
T TIGR02114        90 VSDYTPVYMTDLEQVQASDNL---NEFLSKQ  117 (227)
T ss_pred             eccccchhhCCHHHHhhhcch---hhhhccc
Confidence            887778888999999987544   4455443

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.21  E-value=2.5e-10  Score=93.35  Aligned_cols=205  Identities=20%  Similarity=0.202  Sum_probs=123.1

Q ss_pred             EEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCccEE
Q 024994            3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNIL   82 (259)
Q Consensus         3 ~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~v   82 (259)
                      |+||||+|.+|+++++.|.+.++.|.++.|+..+.  ..++++..+  +.++++|+.|.+++.++++        ..|.|
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~--~~~~l~~~g--~~vv~~d~~~~~~l~~al~--------g~d~v   68 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSD--RAQQLQALG--AEVVEADYDDPESLVAALK--------GVDAV   68 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHH--HHHHHHHTT--TEEEES-TT-HHHHHHHHT--------TCSEE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchh--hhhhhhccc--ceEeecccCCHHHHHHHHc--------CCceE
Confidence            68999999999999999999999999999998432  233344433  4567999999999888874        79999


Q ss_pred             EEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCC-C---CCChhhhhhHHHHH
Q 024994           83 INNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-I---PSVSLYGAYKGAMN  158 (259)
Q Consensus        83 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~-~---~~~~~Y~~sK~a~~  158 (259)
                      |++.+....                ........+++++    .+.+-.++|. ||...... .   .+...+-..|..++
T Consensus        69 ~~~~~~~~~----------------~~~~~~~~li~Aa----~~agVk~~v~-ss~~~~~~~~~~~~p~~~~~~~k~~ie  127 (233)
T PF05368_consen   69 FSVTPPSHP----------------SELEQQKNLIDAA----KAAGVKHFVP-SSFGADYDESSGSEPEIPHFDQKAEIE  127 (233)
T ss_dssp             EEESSCSCC----------------CHHHHHHHHHHHH----HHHT-SEEEE-SEESSGTTTTTTSTTHHHHHHHHHHHH
T ss_pred             EeecCcchh----------------hhhhhhhhHHHhh----hccccceEEE-EEecccccccccccccchhhhhhhhhh
Confidence            999886531                1122333455555    4445577874 55443332 1   11122334566665


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCC---CC-CCHHHHHHHHHHHhCCCCCCc
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIG---RA-GEPDEVSSLVAFLCLPAASYI  234 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~va~~~~~l~~~~~~~~  234 (259)
                      .+.+.       .+++.+.|+||+....+...+............+.-..+..   .+ .+.+|+++.+..++.+...+.
T Consensus       128 ~~l~~-------~~i~~t~i~~g~f~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~  200 (233)
T PF05368_consen  128 EYLRE-------SGIPYTIIRPGFFMENLLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHN  200 (233)
T ss_dssp             HHHHH-------CTSEBEEEEE-EEHHHHHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTT
T ss_pred             hhhhh-------ccccceeccccchhhhhhhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhc
Confidence            44333       38999999999876554432211000000000001111111   23 367999999999998755544


Q ss_pred             cccEEEeCCCceee
Q 024994          235 TGQIICVDGGVTVT  248 (259)
Q Consensus       235 ~G~~l~~dgG~~~~  248 (259)
                      .|..+.+.| ..+|
T Consensus       201 ~~~~~~~~~-~~~t  213 (233)
T PF05368_consen  201 NGKTIFLAG-ETLT  213 (233)
T ss_dssp             EEEEEEEGG-GEEE
T ss_pred             CCEEEEeCC-CCCC
Confidence            788888865 4443

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.03  E-value=4.1e-09  Score=85.82  Aligned_cols=207  Identities=18%  Similarity=0.155  Sum_probs=138.7

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCccE
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNI   81 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~   81 (259)
                      ++-|.||||++|+.++.+|++.|..|++-.|-++-.-.-.+-..+.+ .+.+...|+.|+++++++++        .-++
T Consensus        63 VaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLG-Qvl~~~fd~~DedSIr~vvk--------~sNV  133 (391)
T KOG2865|consen   63 VATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLG-QVLFMKFDLRDEDSIRAVVK--------HSNV  133 (391)
T ss_pred             EEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeeccccc-ceeeeccCCCCHHHHHHHHH--------hCcE
Confidence            45678999999999999999999999999986654332222222323 68899999999999999996        5689


Q ss_pred             EEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHHH
Q 024994           82 LINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLT  161 (259)
Q Consensus        82 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~~  161 (259)
                      |||.-|--.+.  .+.+.+      ++|+.++-.+++.+    ++.+--++|.+|+..+..  ...+-|=-||++-+-.+
T Consensus       134 VINLIGrd~eT--knf~f~------Dvn~~~aerlAric----ke~GVerfIhvS~Lganv--~s~Sr~LrsK~~gE~aV  199 (391)
T KOG2865|consen  134 VINLIGRDYET--KNFSFE------DVNVHIAERLARIC----KEAGVERFIHVSCLGANV--KSPSRMLRSKAAGEEAV  199 (391)
T ss_pred             EEEeecccccc--CCcccc------cccchHHHHHHHHH----HhhChhheeehhhccccc--cChHHHHHhhhhhHHHH
Confidence            99999964332  222332      38888888888887    677778999999987542  33455666777777554


Q ss_pred             HHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCC--------CCCHHHHHHHHHHHhCCCCCC
Q 024994          162 KNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGR--------AGEPDEVSSLVAFLCLPAASY  233 (259)
Q Consensus       162 ~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~va~~~~~l~~~~~~~  233 (259)
                      +..   +    -..+.|+|.-|++..-+-...   ...++.++.. .|+..        ...+.||+.++..-+.|..  
T Consensus       200 rda---f----PeAtIirPa~iyG~eDrfln~---ya~~~rk~~~-~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~--  266 (391)
T KOG2865|consen  200 RDA---F----PEATIIRPADIYGTEDRFLNY---YASFWRKFGF-LPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPD--  266 (391)
T ss_pred             Hhh---C----CcceeechhhhcccchhHHHH---HHHHHHhcCc-eeeecCCcceeeccEEEehHHHHHHHhccCcc--
Confidence            433   3    245678998887654332211   0112222211 22211        2345799999988887653  


Q ss_pred             ccccEEEeCCC
Q 024994          234 ITGQIICVDGG  244 (259)
Q Consensus       234 ~~G~~l~~dgG  244 (259)
                      -.|.++-+-|=
T Consensus       267 s~Gktye~vGP  277 (391)
T KOG2865|consen  267 SMGKTYEFVGP  277 (391)
T ss_pred             ccCceeeecCC
Confidence            47777777654

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.97  E-value=1.7e-07  Score=78.06  Aligned_cols=199  Identities=20%  Similarity=0.101  Sum_probs=128.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      +.+|||||||.+|.+++++|.++|++|.+..|+.++.....       ..+.+...|+.+..++...++        ..|
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~-------~~v~~~~~d~~~~~~l~~a~~--------G~~   65 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA-------GGVEVVLGDLRDPKSLVAGAK--------GVD   65 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc-------CCcEEEEeccCCHhHHHHHhc--------ccc
Confidence            57999999999999999999999999999999999887654       478888999999999888774        688


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      .+++..+... +.. .        .............+.+    . .+..+++.+|+..+..  .....|..+|...+..
T Consensus        66 ~~~~i~~~~~-~~~-~--------~~~~~~~~~~~~a~~a----~-~~~~~~~~~s~~~~~~--~~~~~~~~~~~~~e~~  128 (275)
T COG0702          66 GVLLISGLLD-GSD-A--------FRAVQVTAVVRAAEAA----G-AGVKHGVSLSVLGADA--ASPSALARAKAAVEAA  128 (275)
T ss_pred             EEEEEecccc-ccc-c--------hhHHHHHHHHHHHHHh----c-CCceEEEEeccCCCCC--CCccHHHHHHHHHHHH
Confidence            8888888653 211 1        1113344444444443    1 2245677777766544  3457789999988866


Q ss_pred             HHHHHHHHccCCceEEEEeC-CceeCCCCCCCcCCCCchHHHHhhhhcCCC--C--CCCCHHHHHHHHHHHhCCCCCCcc
Q 024994          161 TKNLACEWAKDNIRTNTVAP-WVIKTSMIKPFEEGPEGSEFLDGIARQTPI--G--RAGEPDEVSSLVAFLCLPAASYIT  235 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~p-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~va~~~~~l~~~~~~~~~  235 (259)
                      .++.       |+.-..+.| +++........      ...........+.  +  .....+|++..+...+....  ..
T Consensus       129 l~~s-------g~~~t~lr~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~i~~~d~a~~~~~~l~~~~--~~  193 (275)
T COG0702         129 LRSS-------GIPYTTLRRAAFYLGAGAAFI------EAAEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDAPA--TA  193 (275)
T ss_pred             HHhc-------CCCeEEEecCeeeeccchhHH------HHHHhhCCceecCCCCceeeeEHHHHHHHHHHHhcCCc--cc
Confidence            5554       677666664 34332221100      0000110000111  1  23467899998877775433  67


Q ss_pred             ccEEEeCCCce
Q 024994          236 GQIICVDGGVT  246 (259)
Q Consensus       236 G~~l~~dgG~~  246 (259)
                      |+++.+.|-..
T Consensus       194 ~~~~~l~g~~~  204 (275)
T COG0702         194 GRTYELAGPEA  204 (275)
T ss_pred             CcEEEccCCce
Confidence            77777777533

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=98.96  E-value=3.3e-08  Score=78.01  Aligned_cols=203  Identities=18%  Similarity=0.070  Sum_probs=130.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC---EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA---IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG   77 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (259)
                      |+++|||++|=+|++|.+.+.++|.   +.+..+.                     -.+|+++.++.+++++.      .
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s---------------------kd~DLt~~a~t~~lF~~------e   54 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS---------------------KDADLTNLADTRALFES------E   54 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc---------------------ccccccchHHHHHHHhc------c
Confidence            6899999999999999999998875   3333221                     14799999999999886      4


Q ss_pred             CccEEEEcCCCCCCCCCCC--CCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCcc-----CC-------
Q 024994           78 KLNILINNAAIAFVKPTVD--ITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV-----RG-------  143 (259)
Q Consensus        78 ~id~vi~~ag~~~~~~~~~--~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~-----~~-------  143 (259)
                      ++.+|||.|+.... -+.+  -..+=|.    .|+.-.-++++.+    .+.+-.++++..|.+-+     +|       
T Consensus        55 kPthVIhlAAmVGG-lf~N~~ynldF~r----~Nl~indNVlhsa----~e~gv~K~vsclStCIfPdkt~yPIdEtmvh  125 (315)
T KOG1431|consen   55 KPTHVIHLAAMVGG-LFHNNTYNLDFIR----KNLQINDNVLHSA----HEHGVKKVVSCLSTCIFPDKTSYPIDETMVH  125 (315)
T ss_pred             CCceeeehHhhhcc-hhhcCCCchHHHh----hcceechhHHHHH----HHhchhhhhhhcceeecCCCCCCCCCHHHhc
Confidence            79999999975421 1111  2233344    4443334455555    34444566776665532     11       


Q ss_pred             ----CCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCC-chH--------------HHHhh
Q 024994          144 ----IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPE-GSE--------------FLDGI  204 (259)
Q Consensus       144 ----~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~-~~~--------------~~~~~  204 (259)
                          -|....|+-+|..+.-..++++.++   |-..+++.|-++.+|--.--++... .+.              ...-+
T Consensus       126 ~gpphpsN~gYsyAKr~idv~n~aY~~qh---g~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~Vw  202 (315)
T KOG1431|consen  126 NGPPHPSNFGYSYAKRMIDVQNQAYRQQH---GRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVW  202 (315)
T ss_pred             cCCCCCCchHHHHHHHHHHHHHHHHHHHh---CCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEe
Confidence                1235679999988887779998776   6778888898887775432111110 000              11112


Q ss_pred             hhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCc
Q 024994          205 ARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVDGGV  245 (259)
Q Consensus       205 ~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~  245 (259)
                      ....|+..+...+|.|+++.|++.+-   -.=+.+++..|+
T Consensus       203 GsG~PlRqFiys~DLA~l~i~vlr~Y---~~vEpiils~ge  240 (315)
T KOG1431|consen  203 GSGSPLRQFIYSDDLADLFIWVLREY---EGVEPIILSVGE  240 (315)
T ss_pred             cCCChHHHHhhHhHHHHHHHHHHHhh---cCccceEeccCc
Confidence            22356666777899999999999643   333567777776

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.91  E-value=1e-08  Score=83.51  Aligned_cols=92  Identities=16%  Similarity=0.161  Sum_probs=63.4

Q ss_pred             cchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCccEEEEcCCC
Q 024994            9 TRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAI   88 (259)
Q Consensus         9 s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~vi~~ag~   88 (259)
                      ||++|.++|++|+++|++|++++|+.....       .....+.++.++  +.++   ..+.+.+.+ +.+|+||||||+
T Consensus        25 SG~iG~aLA~~L~~~G~~V~li~r~~~~~~-------~~~~~v~~i~v~--s~~~---m~~~l~~~~-~~~DivIh~AAv   91 (229)
T PRK06732         25 TGQLGKIIAETFLAAGHEVTLVTTKTAVKP-------EPHPNLSIIEIE--NVDD---LLETLEPLV-KDHDVLIHSMAV   91 (229)
T ss_pred             chHHHHHHHHHHHhCCCEEEEEECcccccC-------CCCCCeEEEEEe--cHHH---HHHHHHHHh-cCCCEEEeCCcc
Confidence            556999999999999999999987642110       011245555542  2222   333333344 579999999999


Q ss_pred             CCCCCCCCCCHHHHHHHHHHhhHhH
Q 024994           89 AFVKPTVDITAEDMSTVSSTNFESV  113 (259)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~n~~~~  113 (259)
                      ....+....+.++|.+++++|.+..
T Consensus        92 sd~~~~~~~~~~~~~~~~~v~~~~~  116 (229)
T PRK06732         92 SDYTPVYMTDLEEVSASDNLNEFLT  116 (229)
T ss_pred             CCceehhhhhhhhhhhhhhhhhhhc
Confidence            8666666778899999988876654

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=98.89  E-value=9.3e-09  Score=97.07  Aligned_cols=175  Identities=21%  Similarity=0.305  Sum_probs=140.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCE-EEEeeCChhHH---HHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAI-VHTCSRNQIEL---DARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ   76 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~-V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (259)
                      |+++|+||-||.|.+++++|.++|++ +++++|+--+.   ...++.+...+..+.+-..|++..+..+.++++..+.  
T Consensus      1769 ksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~kl-- 1846 (2376)
T KOG1202|consen 1769 KSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESNKL-- 1846 (2376)
T ss_pred             ceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhhhc--
Confidence            67899999999999999999999984 88888876432   2446667776777777778888888888888776553  


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHH
Q 024994           77 GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGA  156 (259)
Q Consensus        77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  156 (259)
                      +++-.+||.|.+...+-+++.++++|++.-+..+.+++++-+.-...-.  .-..+|..||.+.-++..+...|+.+.++
T Consensus      1847 ~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~--~LdyFv~FSSvscGRGN~GQtNYG~aNS~ 1924 (2376)
T KOG1202|consen 1847 GPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICP--ELDYFVVFSSVSCGRGNAGQTNYGLANSA 1924 (2376)
T ss_pred             ccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCc--ccceEEEEEeecccCCCCcccccchhhHH
Confidence            5899999999998888889999999999999999999998766533322  24689999999888899999999999999


Q ss_pred             HHHHHHHHHHHHccCCceEEEEeCCce
Q 024994          157 MNQLTKNLACEWAKDNIRTNTVAPWVI  183 (259)
Q Consensus       157 ~~~~~~~~a~e~~~~gi~v~~v~pg~v  183 (259)
                      ++.++.-=+.+    |..=.+|.-|-|
T Consensus      1925 MERiceqRr~~----GfPG~AiQWGAI 1947 (2376)
T KOG1202|consen 1925 MERICEQRRHE----GFPGTAIQWGAI 1947 (2376)
T ss_pred             HHHHHHHhhhc----CCCcceeeeecc
Confidence            99988765433    555555655544

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.86  E-value=3.6e-07  Score=81.72  Aligned_cols=237  Identities=16%  Similarity=0.089  Sum_probs=148.6

Q ss_pred             CEEEEEcCcc-hHHHHHHHHHHHCCCEEEEeeCCh-hHHHHHHHHHHh----cCCcEEEEEecCCCHHHHHHHHHHHHHH
Q 024994            1 MTALVTGGTR-GIGHATVEELARFGAIVHTCSRNQ-IELDARLHEWKN----KGFKVTGSVCDLSSREQREKLIETVTSI   74 (259)
Q Consensus         1 k~~lItG~s~-giG~~~a~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~   74 (259)
                      |++||||++. .||.+++..|++.|++|+++..+- +.-.+..+.+-.    .+..+.++.+++.+..+++++++.+-.+
T Consensus       397 ~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIewIg~e  476 (866)
T COG4982         397 KVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEWIGDE  476 (866)
T ss_pred             ceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHHhccc
Confidence            6799999884 599999999999999999986543 333455555542    3557888889999999999999998653


Q ss_pred             cC-------------CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC---CCEEEEecCC
Q 024994           75 FQ-------------GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG---NGSIVFISSV  138 (259)
Q Consensus        75 ~~-------------~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~~~ii~isS~  138 (259)
                      .-             -.+|++|--|.....+.+.+..++ -+--+.+-+++..+++-.+.++-...+   .-+||.-.|.
T Consensus       477 q~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsr-aE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hVVLPgSP  555 (866)
T COG4982         477 QTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSR-AEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHVVLPGSP  555 (866)
T ss_pred             cccccCCcceecccccCcceeeecccCCccCccccCCch-HHHHHHHHHHHHHHHHHHhhhhccccCcccceEEEecCCC
Confidence            21             137888888887766666554432 233355556666665544433222221   1345555553


Q ss_pred             -CccCCCCCChhhhhhHHHHHHHHHHHHHHHc-cCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCH
Q 024994          139 -GGVRGIPSVSLYGAYKGAMNQLTKNLACEWA-KDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEP  216 (259)
Q Consensus       139 -~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~-~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (259)
                       .+.+  .+..+|+-||++++.++.-+..|-. ...+.+..-+-||+.+.....-.   +   ......++... +--+.
T Consensus       556 NrG~F--GgDGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrGTGLMg~N---d---iiv~aiEk~GV-~tyS~  626 (866)
T COG4982         556 NRGMF--GGDGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRGTGLMGHN---D---IIVAAIEKAGV-RTYST  626 (866)
T ss_pred             CCCcc--CCCcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeeccccccCCc---c---hhHHHHHHhCc-eecCH
Confidence             2333  3568999999999998887766631 11255666677888555443211   1   22222222222 23357


Q ss_pred             HHHHHHHHHHhCCCC---CCccccEEEeCCCcee
Q 024994          217 DEVSSLVAFLCLPAA---SYITGQIICVDGGVTV  247 (259)
Q Consensus       217 ~~va~~~~~l~~~~~---~~~~G~~l~~dgG~~~  247 (259)
                      +|++..++-|++.+.   ..-.--..++.||...
T Consensus       627 ~EmA~~LLgL~saev~e~a~~~PI~aDLtGGL~~  660 (866)
T COG4982         627 DEMAFNLLGLASAEVVELAASSPITADLTGGLGE  660 (866)
T ss_pred             HHHHHHHHhhccHHHHHHHhcCCeEeeccCcccc
Confidence            899998888887553   1223344666688654

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.83  E-value=6e-07  Score=68.84  Aligned_cols=186  Identities=14%  Similarity=0.081  Sum_probs=121.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++-|.|+||-+|..++++..++|+.|+.+.||.+++...        ..+..++.|+.|.+++.+.+        ...|
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~--------~~~~i~q~Difd~~~~a~~l--------~g~D   64 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR--------QGVTILQKDIFDLTSLASDL--------AGHD   64 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc--------ccceeecccccChhhhHhhh--------cCCc
Confidence            6789999999999999999999999999999999988653        25678899999998875555        4799


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCC----------CCCChhh
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG----------IPSVSLY  150 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~----------~~~~~~Y  150 (259)
                      +||..-|....++      +..      ....    .+.++..++..+..|++.++..+...-          .-+...|
T Consensus        65 aVIsA~~~~~~~~------~~~------~~k~----~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~  128 (211)
T COG2910          65 AVISAFGAGASDN------DEL------HSKS----IEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYK  128 (211)
T ss_pred             eEEEeccCCCCCh------hHH------HHHH----HHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHH
Confidence            9999988753221      110      1111    334444456667889999998776532          2233445


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCC--CCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhC
Q 024994          151 GAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK--PFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCL  228 (259)
Q Consensus       151 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  228 (259)
                      ..+++.-+ +..+|..+   ..+.-+-++|..+-.|..+  .++...      +.+.....-....+.+|-|-+++--+.
T Consensus       129 ~~A~~~ae-~L~~Lr~~---~~l~WTfvSPaa~f~PGerTg~yrlgg------D~ll~n~~G~SrIS~aDYAiA~lDe~E  198 (211)
T COG2910         129 PEALAQAE-FLDSLRAE---KSLDWTFVSPAAFFEPGERTGNYRLGG------DQLLVNAKGESRISYADYAIAVLDELE  198 (211)
T ss_pred             HHHHHHHH-HHHHHhhc---cCcceEEeCcHHhcCCccccCceEecc------ceEEEcCCCceeeeHHHHHHHHHHHHh
Confidence            55555444 33445433   3588899999866555332  222211      122222233345567777777765553

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.74  E-value=6.1e-08  Score=81.78  Aligned_cols=80  Identities=20%  Similarity=0.183  Sum_probs=62.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCE-EEEeeCCh---hHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAI-VHTCSRNQ---IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ   76 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~-V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (259)
                      |++||||+ ||+|++++..|++.|++ |++++|+.   ++.+++.+++......+.+..+|+++.++++..+        
T Consensus       127 k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~--------  197 (289)
T PRK12548        127 KKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEI--------  197 (289)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhh--------
Confidence            68999999 69999999999999986 99999997   6677777776554445566678888777665544        


Q ss_pred             CCccEEEEcCCCC
Q 024994           77 GKLNILINNAAIA   89 (259)
Q Consensus        77 ~~id~vi~~ag~~   89 (259)
                      ...|+||||....
T Consensus       198 ~~~DilINaTp~G  210 (289)
T PRK12548        198 ASSDILVNATLVG  210 (289)
T ss_pred             ccCCEEEEeCCCC
Confidence            3579999988654

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.71  E-value=6.1e-08  Score=84.93  Aligned_cols=78  Identities=26%  Similarity=0.232  Sum_probs=60.1

Q ss_pred             CEEEEEcC----------------cchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHH
Q 024994            1 MTALVTGG----------------TRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQR   64 (259)
Q Consensus         1 k~~lItG~----------------s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   64 (259)
                      |++|||||                ||.+|.++|++|+++|++|++++++.+ .+       . ...  ...+|+++.+++
T Consensus       189 k~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~-------~-~~~--~~~~dv~~~~~~  257 (399)
T PRK05579        189 KRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP-------T-PAG--VKRIDVESAQEM  257 (399)
T ss_pred             CEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc-------C-CCC--cEEEccCCHHHH
Confidence            68999999                555999999999999999999998763 11       0 111  346899998887


Q ss_pred             HHHHHHHHHHcCCCccEEEEcCCCCCCCC
Q 024994           65 EKLIETVTSIFQGKLNILINNAAIAFVKP   93 (259)
Q Consensus        65 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~   93 (259)
                      .+.++   +.+ +++|++|||||+....+
T Consensus       258 ~~~v~---~~~-~~~DilI~~Aav~d~~~  282 (399)
T PRK05579        258 LDAVL---AAL-PQADIFIMAAAVADYRP  282 (399)
T ss_pred             HHHHH---Hhc-CCCCEEEEccccccccc
Confidence            77765   446 68999999999875543

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=98.69  E-value=2.5e-08  Score=79.71  Aligned_cols=168  Identities=22%  Similarity=0.148  Sum_probs=118.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHH-HHHHHH-h----cCCcEEEEEecCCCHHHHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDA-RLHEWK-N----KGFKVTGSVCDLSSREQREKLIETVTSI   74 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~-~~~~~~-~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~   74 (259)
                      |++||||=+|-=|..++..|+++|+.|..+-|+.+.... .++.+- +    .+......-.|++|...+.+++..+   
T Consensus        29 kvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i---  105 (376)
T KOG1372|consen   29 KVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI---  105 (376)
T ss_pred             eEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc---
Confidence            689999999999999999999999999999887665432 222222 1    1445666679999999999888876   


Q ss_pred             cCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCcc------------C
Q 024994           75 FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV------------R  142 (259)
Q Consensus        75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~------------~  142 (259)
                         +++-++|.|...+..-..++    .+.+-++...|+++++.+....-... +-++-..|+ +-.            .
T Consensus       106 ---kPtEiYnLaAQSHVkvSFdl----peYTAeVdavGtLRlLdAi~~c~l~~-~VrfYQAst-SElyGkv~e~PQsE~T  176 (376)
T KOG1372|consen  106 ---KPTEVYNLAAQSHVKVSFDL----PEYTAEVDAVGTLRLLDAIRACRLTE-KVRFYQAST-SELYGKVQEIPQSETT  176 (376)
T ss_pred             ---CchhhhhhhhhcceEEEeec----ccceeeccchhhhhHHHHHHhcCccc-ceeEEeccc-HhhcccccCCCcccCC
Confidence               78999999998765422222    33455688999999998874433222 334444443 222            2


Q ss_pred             CCCCChhhhhhHHHHHHHHHHHHHHHc---cCCceEEEEeC
Q 024994          143 GIPSVSLYGAYKGAMNQLTKNLACEWA---KDNIRTNTVAP  180 (259)
Q Consensus       143 ~~~~~~~Y~~sK~a~~~~~~~~a~e~~---~~gi~v~~v~p  180 (259)
                      |+.+.++|+++|.+...++-.++..|.   =.||-+|.=+|
T Consensus       177 PFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESP  217 (376)
T KOG1372|consen  177 PFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESP  217 (376)
T ss_pred             CCCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCC
Confidence            445678999999999888888877653   23566665555

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=98.69  E-value=3.4e-07  Score=79.44  Aligned_cols=170  Identities=18%  Similarity=0.199  Sum_probs=107.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHH-HHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQR-EKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~-~~~~~~~~~~~~~~i   79 (259)
                      ++|+|+||+|++|+-+++.|.++|+.|..+.|+.++.+.... +........-+..|.....++ ..+++.+    +...
T Consensus        80 ~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~-~~~~d~~~~~v~~~~~~~~d~~~~~~~~~----~~~~  154 (411)
T KOG1203|consen   80 TTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG-VFFVDLGLQNVEADVVTAIDILKKLVEAV----PKGV  154 (411)
T ss_pred             CeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc-ccccccccceeeeccccccchhhhhhhhc----cccc
Confidence            479999999999999999999999999999999998887765 111111233334444443332 2222211    1235


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      .+++-++|...... +..++      ..+.+.+..++.+++    +..+-.++++++|+++....+....+.. -....-
T Consensus       155 ~~v~~~~ggrp~~e-d~~~p------~~VD~~g~knlvdA~----~~aGvk~~vlv~si~~~~~~~~~~~~~~-~~~~~~  222 (411)
T KOG1203|consen  155 VIVIKGAGGRPEEE-DIVTP------EKVDYEGTKNLVDAC----KKAGVKRVVLVGSIGGTKFNQPPNILLL-NGLVLK  222 (411)
T ss_pred             eeEEecccCCCCcc-cCCCc------ceecHHHHHHHHHHH----HHhCCceEEEEEeecCcccCCCchhhhh-hhhhhH
Confidence            67777777543221 11222      236678888888887    5566789999999888766554444442 111111


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCC
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSM  187 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~  187 (259)
                      .-+....++...|+....|+||....+.
T Consensus       223 ~k~~~e~~~~~Sgl~ytiIR~g~~~~~~  250 (411)
T KOG1203|consen  223 AKLKAEKFLQDSGLPYTIIRPGGLEQDT  250 (411)
T ss_pred             HHHhHHHHHHhcCCCcEEEeccccccCC
Confidence            1123334456779999999999775543

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.62  E-value=5.4e-07  Score=79.44  Aligned_cols=176  Identities=22%  Similarity=0.225  Sum_probs=113.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC---EEEEeeCChh---HHHHHHHH--------HHhc----CCcEEEEEecCCCHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA---IVHTCSRNQI---ELDARLHE--------WKNK----GFKVTGSVCDLSSRE   62 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~---~V~~~~r~~~---~~~~~~~~--------~~~~----~~~~~~~~~D~~~~~   62 (259)
                      |+++||||||++|+-++..|+..--   +++++-|...   ..+.+..+        +.+.    -.++..+.+|+++++
T Consensus        13 k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~~~   92 (467)
T KOG1221|consen   13 KTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISEPD   92 (467)
T ss_pred             CeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccCcc
Confidence            7899999999999999999987642   6788877432   22222222        2121    246778888988754


Q ss_pred             HHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCcc-
Q 024994           63 QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV-  141 (259)
Q Consensus        63 ~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~-  141 (259)
                      ---..-+.. ... ..+|+|||+|+....       .|..+-.+.+|.+|+..+++.+.....   -..++.+|..-.. 
T Consensus        93 LGis~~D~~-~l~-~eV~ivih~AAtvrF-------de~l~~al~iNt~Gt~~~l~lak~~~~---l~~~vhVSTAy~n~  160 (467)
T KOG1221|consen   93 LGISESDLR-TLA-DEVNIVIHSAATVRF-------DEPLDVALGINTRGTRNVLQLAKEMVK---LKALVHVSTAYSNC  160 (467)
T ss_pred             cCCChHHHH-HHH-hcCCEEEEeeeeecc-------chhhhhhhhhhhHhHHHHHHHHHHhhh---hheEEEeehhheec
Confidence            321111110 111 479999999996532       244566788999999999998854432   3577788775432 


Q ss_pred             ---------CCCC------------------------------CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCc
Q 024994          142 ---------RGIP------------------------------SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWV  182 (259)
Q Consensus       142 ---------~~~~------------------------------~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~  182 (259)
                               ++.+                              ....|.-+|+..+++....+     .++.+..++|..
T Consensus       161 ~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~-----~~lPivIiRPsi  235 (467)
T KOG1221|consen  161 NVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEA-----ENLPLVIIRPSI  235 (467)
T ss_pred             ccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhc-----cCCCeEEEcCCc
Confidence                     1111                              12357777777776666543     367899999999


Q ss_pred             eeCCCCCCCcC
Q 024994          183 IKTSMIKPFEE  193 (259)
Q Consensus       183 v~t~~~~~~~~  193 (259)
                      |.+.....++.
T Consensus       236 I~st~~EP~pG  246 (467)
T KOG1221|consen  236 ITSTYKEPFPG  246 (467)
T ss_pred             eeccccCCCCC
Confidence            98877665543

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.60  E-value=5.9e-07  Score=71.39  Aligned_cols=80  Identities=23%  Similarity=0.228  Sum_probs=63.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+++|+||+|++|+.+++.|+++|++|++++|+.++.+.+.+++.... ......+|..+.+++.+.++        ..|
T Consensus        29 ~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~--------~~d   99 (194)
T cd01078          29 KTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARF-GEGVGAVETSDDAARAAAIK--------GAD   99 (194)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhc-CCcEEEeeCCCHHHHHHHHh--------cCC
Confidence            589999999999999999999999999999999988888777664321 23455678888888766663        578


Q ss_pred             EEEEcCCCC
Q 024994           81 ILINNAAIA   89 (259)
Q Consensus        81 ~vi~~ag~~   89 (259)
                      +||++....
T Consensus       100 iVi~at~~g  108 (194)
T cd01078         100 VVFAAGAAG  108 (194)
T ss_pred             EEEECCCCC
Confidence            888876643

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.43  E-value=9.4e-07  Score=77.24  Aligned_cols=105  Identities=21%  Similarity=0.182  Sum_probs=71.1

Q ss_pred             CEEEEEcC---------------cch-HHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHH
Q 024994            1 MTALVTGG---------------TRG-IGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQR   64 (259)
Q Consensus         1 k~~lItG~---------------s~g-iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   64 (259)
                      |++|||||               ||| +|.++|+.|..+|++|+++.++....         ....  ...+|+++.+++
T Consensus       186 ~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~---------~~~~--~~~~~v~~~~~~  254 (390)
T TIGR00521       186 KRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL---------TPPG--VKSIKVSTAEEM  254 (390)
T ss_pred             ceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC---------CCCC--cEEEEeccHHHH
Confidence            68999999               667 99999999999999999988765421         1111  246899998888


Q ss_pred             -HHHHHHHHHHcCCCccEEEEcCCCCCCCCCCCCC--HHHHHHHHHHhhHhHHHHHHHH
Q 024994           65 -EKLIETVTSIFQGKLNILINNAAIAFVKPTVDIT--AEDMSTVSSTNFESVFHLSQLA  120 (259)
Q Consensus        65 -~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~--~~~~~~~~~~n~~~~~~~~~~~  120 (259)
                       ++++++.   + +++|++|+|||+....+....+  .+...+.+.+|+...--+++.+
T Consensus       255 ~~~~~~~~---~-~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l  309 (390)
T TIGR00521       255 LEAALNEL---A-KDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEV  309 (390)
T ss_pred             HHHHHHhh---c-ccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHH
Confidence             5555442   3 5799999999997655432211  1111223446666666666555

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PLN00106 malate dehydrogenase

Probab=98.42  E-value=2.1e-06  Score=73.22  Aligned_cols=147  Identities=13%  Similarity=0.052  Sum_probs=95.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC--EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      ++++|||++|.+|.+++..|+.++.  .++++|++.  .+....++.+.....  ...++++.++....+        ..
T Consensus        19 ~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~--~~g~a~Dl~~~~~~~--~i~~~~~~~d~~~~l--------~~   86 (323)
T PLN00106         19 FKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN--TPGVAADVSHINTPA--QVRGFLGDDQLGDAL--------KG   86 (323)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC--CCeeEchhhhCCcCc--eEEEEeCCCCHHHHc--------CC
Confidence            4799999999999999999998775  799999977  222222333222222  223433332332233        47


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecC-CCc----c--------CCCC
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISS-VGG----V--------RGIP  145 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS-~~~----~--------~~~~  145 (259)
                      .|+||+.||....      +...+.+.+..|+.....+.+.+    .+....++++++| ...    .        .++|
T Consensus        87 aDiVVitAG~~~~------~g~~R~dll~~N~~i~~~i~~~i----~~~~p~aivivvSNPvD~~~~i~t~~~~~~s~~p  156 (323)
T PLN00106         87 ADLVIIPAGVPRK------PGMTRDDLFNINAGIVKTLCEAV----AKHCPNALVNIISNPVNSTVPIAAEVLKKAGVYD  156 (323)
T ss_pred             CCEEEEeCCCCCC------CCCCHHHHHHHHHHHHHHHHHHH----HHHCCCeEEEEeCCCccccHHHHHHHHHHcCCCC
Confidence            9999999997532      11335667888888877776666    5544444544444 443    1        3456


Q ss_pred             CChhhhhhHHHHHHHHHHHHHHHc
Q 024994          146 SVSLYGAYKGAMNQLTKNLACEWA  169 (259)
Q Consensus       146 ~~~~Y~~sK~a~~~~~~~~a~e~~  169 (259)
                      +.-.|+.++.-...|-..++..+.
T Consensus       157 ~~~viG~~~LDs~Rl~~~lA~~lg  180 (323)
T PLN00106        157 PKKLFGVTTLDVVRANTFVAEKKG  180 (323)
T ss_pred             cceEEEEecchHHHHHHHHHHHhC
Confidence            778899988777788888888873

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=98.42  E-value=9.9e-07  Score=70.24  Aligned_cols=157  Identities=16%  Similarity=0.259  Sum_probs=104.6

Q ss_pred             EEEEEcCcchHHHHHHHHHHHC-CC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            2 TALVTGGTRGIGHATVEELARF-GA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~-G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      ++||||+-|-+|..+|..|..+ |- .|++.+.......-     -..+   -++-.|+.|..++++++-.      .++
T Consensus        46 rvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V-----~~~G---PyIy~DILD~K~L~eIVVn------~RI  111 (366)
T KOG2774|consen   46 RVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANV-----TDVG---PYIYLDILDQKSLEEIVVN------KRI  111 (366)
T ss_pred             eEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhh-----cccC---CchhhhhhccccHHHhhcc------ccc
Confidence            6899999999999999999876 64 57776644333211     1112   2455788888888777642      589


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCC------C------CC
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI------P------SV  147 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~------~------~~  147 (259)
                      |.+||-.+....     ....+.--..++|+.|..++++.+    .+. +=++..-|.++++-|.      |      +.
T Consensus       112 dWL~HfSALLSA-----vGE~NVpLA~~VNI~GvHNil~vA----a~~-kL~iFVPSTIGAFGPtSPRNPTPdltIQRPR  181 (366)
T KOG2774|consen  112 DWLVHFSALLSA-----VGETNVPLALQVNIRGVHNILQVA----AKH-KLKVFVPSTIGAFGPTSPRNPTPDLTIQRPR  181 (366)
T ss_pred             ceeeeHHHHHHH-----hcccCCceeeeecchhhhHHHHHH----HHc-CeeEeecccccccCCCCCCCCCCCeeeecCc
Confidence            999998775421     111222233569999999999887    333 3344444555555432      1      34


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHccCCceEEEE-eCCceeC
Q 024994          148 SLYGAYKGAMNQLTKNLACEWAKDNIRTNTV-APWVIKT  185 (259)
Q Consensus       148 ~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v-~pg~v~t  185 (259)
                      ..|+.||.-.+.+-+.+...+   |+.+.+. .||.+..
T Consensus       182 TIYGVSKVHAEL~GEy~~hrF---g~dfr~~rfPg~is~  217 (366)
T KOG2774|consen  182 TIYGVSKVHAELLGEYFNHRF---GVDFRSMRFPGIISA  217 (366)
T ss_pred             eeechhHHHHHHHHHHHHhhc---CccceecccCccccc
Confidence            679999999999999886665   7777676 4666643

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.41  E-value=1.8e-06  Score=74.88  Aligned_cols=77  Identities=26%  Similarity=0.314  Sum_probs=66.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCC-CEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++||.|+ |+||+.+|..|+++| .+|++.+|+.++..++....   ..++..+++|+.|.+.+.++++        ..
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~---~~~v~~~~vD~~d~~al~~li~--------~~   69 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI---GGKVEALQVDAADVDALVALIK--------DF   69 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc---cccceeEEecccChHHHHHHHh--------cC
Confidence            57899999 999999999999999 89999999999888776543   2389999999999999888886        34


Q ss_pred             cEEEEcCCCC
Q 024994           80 NILINNAAIA   89 (259)
Q Consensus        80 d~vi~~ag~~   89 (259)
                      |+|||++...
T Consensus        70 d~VIn~~p~~   79 (389)
T COG1748          70 DLVINAAPPF   79 (389)
T ss_pred             CEEEEeCCch
Confidence            9999999854

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.31  E-value=4.4e-06  Score=73.55  Aligned_cols=76  Identities=26%  Similarity=0.310  Sum_probs=60.7

Q ss_pred             EEEEcCcchHHHHHHHHHHHCCC--EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            3 ALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         3 ~lItG~s~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+|.|+ |.+|+.+++.|++++-  +|++.+|+.+++++..+++  .+.++.++++|+.|.+++.++++        .-|
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~l~~~~~--------~~d   69 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL--LGDRVEAVQVDVNDPESLAELLR--------GCD   69 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT----TTTTEEEEE--TTTHHHHHHHHT--------TSS
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc--cccceeEEEEecCCHHHHHHHHh--------cCC
Confidence            689999 9999999999999974  8999999999998877654  35689999999999999888874        569


Q ss_pred             EEEEcCCCC
Q 024994           81 ILINNAAIA   89 (259)
Q Consensus        81 ~vi~~ag~~   89 (259)
                      +|||+++..
T Consensus        70 vVin~~gp~   78 (386)
T PF03435_consen   70 VVINCAGPF   78 (386)
T ss_dssp             EEEE-SSGG
T ss_pred             EEEECCccc
Confidence            999999964

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PTZ00325 malate dehydrogenase; Provisional

Probab=98.28  E-value=1.3e-05  Score=68.48  Aligned_cols=152  Identities=16%  Similarity=0.102  Sum_probs=95.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCC--CEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFG--AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      ++++|||++|.||..++..|+.++  ..++++|++.  .+....++.+...  .+...+.+|..+..+.+        ..
T Consensus         9 ~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~--~~g~a~Dl~~~~~--~~~v~~~td~~~~~~~l--------~g   76 (321)
T PTZ00325          9 FKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVG--APGVAADLSHIDT--PAKVTGYADGELWEKAL--------RG   76 (321)
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCC--CcccccchhhcCc--CceEEEecCCCchHHHh--------CC
Confidence            479999999999999999999766  4799999932  2222223332222  22334555543322233        47


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCc-------------cCCCC
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG-------------VRGIP  145 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~-------------~~~~~  145 (259)
                      .|+||+++|....      +.+.+.+.+..|+...-.+.+.+    .+.+..++|+++|-..             ..+.|
T Consensus        77 aDvVVitaG~~~~------~~~tR~dll~~N~~i~~~i~~~i----~~~~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p  146 (321)
T PTZ00325         77 ADLVLICAGVPRK------PGMTRDDLFNTNAPIVRDLVAAV----ASSAPKAIVGIVSNPVNSTVPIAAETLKKAGVYD  146 (321)
T ss_pred             CCEEEECCCCCCC------CCCCHHHHHHHHHHHHHHHHHHH----HHHCCCeEEEEecCcHHHHHHHHHhhhhhccCCC
Confidence            9999999997422      11235667888887777766555    6666678888877421             23456


Q ss_pred             CChhhhhhHHHHH--HHHHHHHHHHccCCceEEEEe
Q 024994          146 SVSLYGAYKGAMN--QLTKNLACEWAKDNIRTNTVA  179 (259)
Q Consensus       146 ~~~~Y~~sK~a~~--~~~~~~a~e~~~~gi~v~~v~  179 (259)
                      +.-.|+.+-  ++  .|-..++..+   ++....|+
T Consensus       147 ~~~viG~g~--LDs~R~r~~la~~l---~v~~~~V~  177 (321)
T PTZ00325        147 PRKLFGVTT--LDVVRARKFVAEAL---GMNPYDVN  177 (321)
T ss_pred             hhheeechh--HHHHHHHHHHHHHh---CcChhheE
Confidence            667788862  54  4556666665   55544444

>PRK09620 hypothetical protein; Provisional

Probab=98.21  E-value=2.4e-06  Score=69.49  Aligned_cols=83  Identities=19%  Similarity=0.091  Sum_probs=51.3

Q ss_pred             CEEEEEcCc----------------chHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHH
Q 024994            1 MTALVTGGT----------------RGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQR   64 (259)
Q Consensus         1 k~~lItG~s----------------~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   64 (259)
                      |++|||+|.                |.+|.++|++|.++|+.|+++++........   +. ....+..+..|    .++
T Consensus         4 k~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~---~~-~~~~~~~V~s~----~d~   75 (229)
T PRK09620          4 KKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPND---IN-NQLELHPFEGI----IDL   75 (229)
T ss_pred             CEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcc---cC-CceeEEEEecH----HHH
Confidence            689999886                9999999999999999999888643211110   00 01123333332    222


Q ss_pred             HHHHHHHHHHcCCCccEEEEcCCCCCCCC
Q 024994           65 EKLIETVTSIFQGKLNILINNAAIAFVKP   93 (259)
Q Consensus        65 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~   93 (259)
                      ...+.++.+.  .++|+|||+|++....+
T Consensus        76 ~~~l~~~~~~--~~~D~VIH~AAvsD~~~  102 (229)
T PRK09620         76 QDKMKSIITH--EKVDAVIMAAAGSDWVV  102 (229)
T ss_pred             HHHHHHHhcc--cCCCEEEECccccceec
Confidence            2233333221  26899999999875443

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.10  E-value=1.3e-05  Score=67.59  Aligned_cols=79  Identities=16%  Similarity=0.195  Sum_probs=68.4

Q ss_pred             EEEEcCcchHHHHHHHHHHH----CCCEEEEeeCChhHHHHHHHHHHhcCC----cEEEEEecCCCHHHHHHHHHHHHHH
Q 024994            3 ALVTGGTRGIGHATVEELAR----FGAIVHTCSRNQIELDARLHEWKNKGF----KVTGSVCDLSSREQREKLIETVTSI   74 (259)
Q Consensus         3 ~lItG~s~giG~~~a~~l~~----~G~~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~   74 (259)
                      ++|-||||..|..++.++.+    .|..+.+.+||++++++.++.+.....    ...++.+|.+|+++++++++     
T Consensus         8 vVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak-----   82 (423)
T KOG2733|consen    8 VVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAK-----   82 (423)
T ss_pred             EEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHh-----
Confidence            68999999999999999999    788999999999999999988876532    23378899999999999886     


Q ss_pred             cCCCccEEEEcCCCC
Q 024994           75 FQGKLNILINNAAIA   89 (259)
Q Consensus        75 ~~~~id~vi~~ag~~   89 (259)
                         .-.+|+||+|..
T Consensus        83 ---~~~vivN~vGPy   94 (423)
T KOG2733|consen   83 ---QARVIVNCVGPY   94 (423)
T ss_pred             ---hhEEEEeccccc
Confidence               468999999964

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.08  E-value=3.2e-05  Score=57.66  Aligned_cols=73  Identities=25%  Similarity=0.366  Sum_probs=55.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCE-EEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAI-VHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |+++|.|+ ||.|++++.+|.+.|++ |+++.|+.++.+++.+++.  +..+.+.  ++.+..   ..+        .+.
T Consensus        13 ~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~--~~~~~~~--~~~~~~---~~~--------~~~   76 (135)
T PF01488_consen   13 KRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFG--GVNIEAI--PLEDLE---EAL--------QEA   76 (135)
T ss_dssp             SEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHT--GCSEEEE--EGGGHC---HHH--------HTE
T ss_pred             CEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcC--cccccee--eHHHHH---HHH--------hhC
Confidence            68999998 99999999999999986 9999999999999888872  2234433  333322   222        378


Q ss_pred             cEEEEcCCCC
Q 024994           80 NILINNAAIA   89 (259)
Q Consensus        80 d~vi~~ag~~   89 (259)
                      |+||++.+..
T Consensus        77 DivI~aT~~~   86 (135)
T PF01488_consen   77 DIVINATPSG   86 (135)
T ss_dssp             SEEEE-SSTT
T ss_pred             CeEEEecCCC
Confidence            9999999865

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=97.99  E-value=9.2e-05  Score=63.39  Aligned_cols=144  Identities=13%  Similarity=0.070  Sum_probs=93.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-------EEEEeeCChhH--HHHHHHHHHhcC----CcEEEEEecCCCHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-------IVHTCSRNQIE--LDARLHEWKNKG----FKVTGSVCDLSSREQREKL   67 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-------~V~~~~r~~~~--~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~   67 (259)
                      +++.|+|++|.+|.+++..|+.+|.       .++++|++++.  ++....++....    .++.   ..-.+.+.    
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~---i~~~~~~~----   75 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIV---ITDDPNVA----   75 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceE---EecCcHHH----
Confidence            4789999999999999999998885       69999985543  444444444321    1111   11112111    


Q ss_pred             HHHHHHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC--CCEEEEecCCCcc----
Q 024994           68 IETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG--NGSIVFISSVGGV----  141 (259)
Q Consensus        68 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~ii~isS~~~~----  141 (259)
                             + ..-|+||.+||....   ...+.   .+.++.|+.    +.+.+.+.+.+..  .+.+|++|-....    
T Consensus        76 -------~-~daDivvitaG~~~k---~g~tR---~dll~~N~~----i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~  137 (322)
T cd01338          76 -------F-KDADWALLVGAKPRG---PGMER---ADLLKANGK----IFTAQGKALNDVASRDVKVLVVGNPCNTNALI  137 (322)
T ss_pred             -------h-CCCCEEEEeCCCCCC---CCCcH---HHHHHHHHH----HHHHHHHHHHhhCCCCeEEEEecCcHHHHHHH
Confidence                   1 579999999997522   12232   234555554    4444455555543  5777877765422    


Q ss_pred             ----CC-CCCChhhhhhHHHHHHHHHHHHHHHc
Q 024994          142 ----RG-IPSVSLYGAYKGAMNQLTKNLACEWA  169 (259)
Q Consensus       142 ----~~-~~~~~~Y~~sK~a~~~~~~~~a~e~~  169 (259)
                          .+ .|....|+.++.--..|...+++.+.
T Consensus       138 ~~k~sg~~p~~~ViG~t~LDs~Rl~~~la~~lg  170 (322)
T cd01338         138 AMKNAPDIPPDNFTAMTRLDHNRAKSQLAKKAG  170 (322)
T ss_pred             HHHHcCCCChHheEEehHHHHHHHHHHHHHHhC
Confidence                33 67777899999999999999998873

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.98  E-value=4.4e-05  Score=68.60  Aligned_cols=73  Identities=18%  Similarity=0.275  Sum_probs=55.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCCh-hHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ-IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |+++|+|+++ +|.++|+.|+++|++|++++++. +..++..+++...+  +.++..|..+.            .. +.+
T Consensus         6 k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~------------~~-~~~   69 (450)
T PRK14106          6 KKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELG--IELVLGEYPEE------------FL-EGV   69 (450)
T ss_pred             CEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC--CEEEeCCcchh------------Hh-hcC
Confidence            6899999877 99999999999999999999975 44444455554333  45667777651            11 479


Q ss_pred             cEEEEcCCCC
Q 024994           80 NILINNAAIA   89 (259)
Q Consensus        80 d~vi~~ag~~   89 (259)
                      |+||+++|..
T Consensus        70 d~vv~~~g~~   79 (450)
T PRK14106         70 DLVVVSPGVP   79 (450)
T ss_pred             CEEEECCCCC
Confidence            9999999974

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.98  E-value=5.4e-05  Score=64.88  Aligned_cols=70  Identities=24%  Similarity=0.215  Sum_probs=52.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHC-C-CEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARF-G-AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~-G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |+++||||+|.||+.++++|+++ | .++++++|+.+++..+..++..         .|+.   +++       +.+ ..
T Consensus       156 k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~---------~~i~---~l~-------~~l-~~  215 (340)
T PRK14982        156 ATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGG---------GKIL---SLE-------EAL-PE  215 (340)
T ss_pred             CEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcc---------ccHH---hHH-------HHH-cc
Confidence            68999999999999999999865 5 4899999998888776655421         2222   222       222 46


Q ss_pred             ccEEEEcCCCCC
Q 024994           79 LNILINNAAIAF   90 (259)
Q Consensus        79 id~vi~~ag~~~   90 (259)
                      .|+||++++...
T Consensus       216 aDiVv~~ts~~~  227 (340)
T PRK14982        216 ADIVVWVASMPK  227 (340)
T ss_pred             CCEEEECCcCCc
Confidence            899999999753

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=97.96  E-value=0.0001  Score=56.46  Aligned_cols=154  Identities=19%  Similarity=0.150  Sum_probs=98.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC--EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |.++|.|+||-.|..+.+++.+.+-  +|+++.|++....+.       ..++.....|.+..++.....        ..
T Consensus        19 ~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at-------~k~v~q~~vDf~Kl~~~a~~~--------qg   83 (238)
T KOG4039|consen   19 MSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT-------DKVVAQVEVDFSKLSQLATNE--------QG   83 (238)
T ss_pred             cceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccc-------cceeeeEEechHHHHHHHhhh--------cC
Confidence            4689999999999999999999984  799999876333222       335666677876655533322        47


Q ss_pred             ccEEEEcCCCCCCC-CCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHH
Q 024994           79 LNILINNAAIAFVK-PTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAM  157 (259)
Q Consensus        79 id~vi~~ag~~~~~-~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~  157 (259)
                      +|++|++-|..... ..+.        .+.+.=-=.+.+++++    ++.+-..++.+||.++.-.+  ...|--.|--+
T Consensus        84 ~dV~FcaLgTTRgkaGadg--------fykvDhDyvl~~A~~A----Ke~Gck~fvLvSS~GAd~sS--rFlY~k~KGEv  149 (238)
T KOG4039|consen   84 PDVLFCALGTTRGKAGADG--------FYKVDHDYVLQLAQAA----KEKGCKTFVLVSSAGADPSS--RFLYMKMKGEV  149 (238)
T ss_pred             CceEEEeecccccccccCc--------eEeechHHHHHHHHHH----HhCCCeEEEEEeccCCCccc--ceeeeeccchh
Confidence            99999998864221 1111        1111111123444555    55666789999998775433  35677777777


Q ss_pred             HHHHHHHHHHHccCCceEEEEeCCceeCCCCC
Q 024994          158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK  189 (259)
Q Consensus       158 ~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~  189 (259)
                      +.=+..|.  +    =++..++||++..+...
T Consensus       150 E~~v~eL~--F----~~~~i~RPG~ll~~R~e  175 (238)
T KOG4039|consen  150 ERDVIELD--F----KHIIILRPGPLLGERTE  175 (238)
T ss_pred             hhhhhhcc--c----cEEEEecCcceeccccc
Confidence            64333331  1    26788999999776654

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.93  E-value=3.7e-05  Score=65.93  Aligned_cols=117  Identities=13%  Similarity=0.127  Sum_probs=67.2

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCC-------CEEEEeeCChhH--HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Q 024994            2 TALVTGGTRGIGHATVEELARFG-------AIVHTCSRNQIE--LDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVT   72 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G-------~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   72 (259)
                      +++|||++|.+|.+++..|+..+       ..|++++++...  ++....++.+.   ......|+....+..+.+    
T Consensus         4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~---~~~~~~~~~~~~~~~~~l----   76 (325)
T cd01336           4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDC---AFPLLKSVVATTDPEEAF----   76 (325)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhc---cccccCCceecCCHHHHh----
Confidence            68999999999999999999854       589999996532  22211111110   001111332222222222    


Q ss_pred             HHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC--CCCEEEEecCCC
Q 024994           73 SIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS--GNGSIVFISSVG  139 (259)
Q Consensus        73 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~ii~isS~~  139 (259)
                          ...|+|||+||.....   ..+.   .+.++.|+.-.-.+    .+.+.+.  .++.+|++|...
T Consensus        77 ----~~aDiVI~tAG~~~~~---~~~R---~~l~~~N~~i~~~i----~~~i~~~~~~~~iiivvsNPv  131 (325)
T cd01336          77 ----KDVDVAILVGAMPRKE---GMER---KDLLKANVKIFKEQ----GEALDKYAKKNVKVLVVGNPA  131 (325)
T ss_pred             ----CCCCEEEEeCCcCCCC---CCCH---HHHHHHHHHHHHHH----HHHHHHhCCCCeEEEEecCcH
Confidence                4799999999985321   2232   44555666544444    4444544  257777777644

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.89  E-value=0.00027  Score=59.85  Aligned_cols=77  Identities=21%  Similarity=0.327  Sum_probs=53.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      ++++|+|+++++|.++++.+...|.+|+.++++.++.+.+ .++   +...   .+|..+.+..+.+.+.. .  ++++|
T Consensus       146 ~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~---~~~~~~~~~~~~~~~~~-~--~~~~d  215 (325)
T cd08253         146 ETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELV-RQA---GADA---VFNYRAEDLADRILAAT-A--GQGVD  215 (325)
T ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCCE---EEeCCCcCHHHHHHHHc-C--CCceE
Confidence            4799999999999999999999999999999988776554 222   2221   23444444433333222 1  13699


Q ss_pred             EEEEcCC
Q 024994           81 ILINNAA   87 (259)
Q Consensus        81 ~vi~~ag   87 (259)
                      .++++++
T Consensus       216 ~vi~~~~  222 (325)
T cd08253         216 VIIEVLA  222 (325)
T ss_pred             EEEECCc
Confidence            9999987

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PRK05086 malate dehydrogenase; Provisional

Probab=97.80  E-value=0.00032  Score=59.85  Aligned_cols=117  Identities=15%  Similarity=0.072  Sum_probs=64.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHH-C--CCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024994            1 MTALVTGGTRGIGHATVEELAR-F--GAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG   77 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~-~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (259)
                      |+++|+|++|++|.+++..|.. .  +..+++.+|++. .+....++.+........-++-.+   +.+.+        .
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~alDl~~~~~~~~i~~~~~~d---~~~~l--------~   68 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVAVDLSHIPTAVKIKGFSGED---PTPAL--------E   68 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-CcceehhhhcCCCCceEEEeCCCC---HHHHc--------C
Confidence            6899999999999999998865 2  457888898754 221112232211111111112222   11111        3


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecC-CC
Q 024994           78 KLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISS-VG  139 (259)
Q Consensus        78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS-~~  139 (259)
                      ..|+||.++|......   .+   -.+.+..|....-.+.+.+    .+....+++.+.| ..
T Consensus        69 ~~DiVIitaG~~~~~~---~~---R~dll~~N~~i~~~ii~~i----~~~~~~~ivivvsNP~  121 (312)
T PRK05086         69 GADVVLISAGVARKPG---MD---RSDLFNVNAGIVKNLVEKV----AKTCPKACIGIITNPV  121 (312)
T ss_pred             CCCEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHH----HHhCCCeEEEEccCch
Confidence            6999999999754321   12   2344566765555554444    5554444554444 44

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.80  E-value=0.0014  Score=49.16  Aligned_cols=114  Identities=11%  Similarity=0.126  Sum_probs=73.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC--EEEEeeCChhHHHHHHHHHHhc---C-CcEEEEEecCCCHHHHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNK---G-FKVTGSVCDLSSREQREKLIETVTSI   74 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~---~-~~~~~~~~D~~~~~~~~~~~~~~~~~   74 (259)
                      +++.|+|++|.+|.+++..|...+.  +++++++++++++....+++..   . .......   .+.+.           
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~~~-----------   66 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GDYEA-----------   66 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SSGGG-----------
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---ccccc-----------
Confidence            5789999999999999999999975  7999999998887777776643   2 1222222   22222           


Q ss_pred             cCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCC
Q 024994           75 FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSV  138 (259)
Q Consensus        75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~  138 (259)
                      + ..-|++|..+|....   ...+   -.+.++.|..-.-.+.+.+..+   ..++.++.++..
T Consensus        67 ~-~~aDivvitag~~~~---~g~s---R~~ll~~N~~i~~~~~~~i~~~---~p~~~vivvtNP  120 (141)
T PF00056_consen   67 L-KDADIVVITAGVPRK---PGMS---RLDLLEANAKIVKEIAKKIAKY---APDAIVIVVTNP  120 (141)
T ss_dssp             G-TTESEEEETTSTSSS---TTSS---HHHHHHHHHHHHHHHHHHHHHH---STTSEEEE-SSS
T ss_pred             c-ccccEEEEecccccc---cccc---HHHHHHHhHhHHHHHHHHHHHh---CCccEEEEeCCc
Confidence            1 579999999997532   1122   3344556665555554444322   345777777653

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.70  E-value=0.0004  Score=58.08  Aligned_cols=72  Identities=15%  Similarity=0.294  Sum_probs=53.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++...+ .....  +..   .   .      .. ...|
T Consensus       118 k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~-~~~~~--~~~---~---~------~~-~~~D  180 (270)
T TIGR00507       118 QRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYG-EIQAF--SMD---E---L------PL-HRVD  180 (270)
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcC-ceEEe--chh---h---h------cc-cCcc
Confidence            57999999 699999999999999999999999988888777765432 22221  111   1   0      01 3689


Q ss_pred             EEEEcCCCC
Q 024994           81 ILINNAAIA   89 (259)
Q Consensus        81 ~vi~~ag~~   89 (259)
                      +|||+.+..
T Consensus       181 ivInatp~g  189 (270)
T TIGR00507       181 LIINATSAG  189 (270)
T ss_pred             EEEECCCCC
Confidence            999999874

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK06849 hypothetical protein; Provisional

Probab=97.69  E-value=0.00043  Score=61.05  Aligned_cols=81  Identities=11%  Similarity=0.038  Sum_probs=56.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+|||||++..+|.++++.|.+.|++|++++.+........+.+.    ....+...-.+.+...+.+.++.++.  ++|
T Consensus         5 ~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~d----~~~~~p~p~~d~~~~~~~L~~i~~~~--~id   78 (389)
T PRK06849          5 KTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAVD----GFYTIPSPRWDPDAYIQALLSIVQRE--NID   78 (389)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhhh----heEEeCCCCCCHHHHHHHHHHHHHHc--CCC
Confidence            789999999999999999999999999999988755433222221    23333223345555555555555554  689


Q ss_pred             EEEEcCC
Q 024994           81 ILINNAA   87 (259)
Q Consensus        81 ~vi~~ag   87 (259)
                      +||-...
T Consensus        79 ~vIP~~e   85 (389)
T PRK06849         79 LLIPTCE   85 (389)
T ss_pred             EEEECCh
Confidence            9998775

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.69  E-value=0.00031  Score=53.39  Aligned_cols=73  Identities=19%  Similarity=0.296  Sum_probs=53.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCC-CEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |+++|+|+ |++|.++++.|.+.| .+|++++|+.++.++..+++....     +..+.++.++.          . ...
T Consensus        20 ~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~~~----------~-~~~   82 (155)
T cd01065          20 KKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-----IAIAYLDLEEL----------L-AEA   82 (155)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-----cceeecchhhc----------c-ccC
Confidence            57899998 899999999999996 789999999988877766654211     22334443322          1 479


Q ss_pred             cEEEEcCCCCC
Q 024994           80 NILINNAAIAF   90 (259)
Q Consensus        80 d~vi~~ag~~~   90 (259)
                      |+||++.....
T Consensus        83 Dvvi~~~~~~~   93 (155)
T cd01065          83 DLIINTTPVGM   93 (155)
T ss_pred             CEEEeCcCCCC
Confidence            99999998643

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=97.60  E-value=0.00023  Score=58.83  Aligned_cols=75  Identities=15%  Similarity=0.149  Sum_probs=56.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++||+|||+- |+.+++.|.++|++|+...++....+....     . ....+..+..|.+++.+++++      .++|
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~-----~-g~~~v~~g~l~~~~l~~~l~~------~~i~   67 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI-----H-QALTVHTGALDPQELREFLKR------HSID   67 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc-----c-CCceEEECCCCHHHHHHHHHh------cCCC
Confidence            68999999998 999999999999999999998875544321     1 122344677777777777654      4799


Q ss_pred             EEEEcCCC
Q 024994           81 ILINNAAI   88 (259)
Q Consensus        81 ~vi~~ag~   88 (259)
                      +||+.+..
T Consensus        68 ~VIDAtHP   75 (256)
T TIGR00715        68 ILVDATHP   75 (256)
T ss_pred             EEEEcCCH
Confidence            99998863

This enzyme was found to be a monomer by gel filtration.

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.58  E-value=0.00048  Score=57.88  Aligned_cols=72  Identities=19%  Similarity=0.317  Sum_probs=52.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCC-CEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |+++|+|+ ||+|++++..|++.| .+|++++|+.++.+++.+++.... .+.   .++    +....       . ...
T Consensus       124 k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~-~~~---~~~----~~~~~-------~-~~~  186 (278)
T PRK00258        124 KRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALG-KAE---LDL----ELQEE-------L-ADF  186 (278)
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc-cee---ecc----cchhc-------c-ccC
Confidence            57999997 999999999999999 699999999998888777664221 111   111    00111       1 468


Q ss_pred             cEEEEcCCCC
Q 024994           80 NILINNAAIA   89 (259)
Q Consensus        80 d~vi~~ag~~   89 (259)
                      |+|||+....
T Consensus       187 DivInaTp~g  196 (278)
T PRK00258        187 DLIINATSAG  196 (278)
T ss_pred             CEEEECCcCC
Confidence            9999998764

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=97.57  E-value=0.0012  Score=70.04  Aligned_cols=174  Identities=17%  Similarity=0.150  Sum_probs=108.4

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCccE
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNI   81 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~   81 (259)
                      .++|+..+++++.+++.+|.++|+.|+.+......    ..........+..+...--|.+++..+++.+.... +.++.
T Consensus      1757 ~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g 1831 (2582)
T TIGR02813      1757 NALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWVV----SHSASPLASAIASVTLGTIDDTSIEAVIKDIEEKT-AQIDG 1831 (2582)
T ss_pred             eeEEEcCCcchHHHHHHHHHhCCCeEEEeeccccc----cccccccccccccccccccchHHHHHHHHhhhccc-cccce
Confidence            46788888999999999999999998887422110    00000001122233444456677777777775544 67999


Q ss_pred             EEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhh--------hhh
Q 024994           82 LINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLY--------GAY  153 (259)
Q Consensus        82 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y--------~~s  153 (259)
                      +||........ ....+.......-...+...|.++|.+.+.+...+...++.++...|.++.......        ...
T Consensus      1832 ~i~l~~~~~~~-~~~~~~~~~~~~~~~~l~~~f~~ak~~~~~l~~~~~~~~~~vsr~~G~~g~~~~~~~~~~~~~~~~~~ 1910 (2582)
T TIGR02813      1832 FIHLQPQHKSV-ADKVDAIELPEAAKQSLMLAFLFAKLLNVKLATNARASFVTVSRIDGGFGYSNGDADSGTQQVKAELN 1910 (2582)
T ss_pred             EEEeccccccc-cccccccccchhhHHHHHHHHHHHHhhchhhccCCCeEEEEEEecCCccccCCccccccccccccchh
Confidence            99988754221 000000011111123455567777777666555556789999998877776432221        235


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEeCC
Q 024994          154 KGAMNQLTKNLACEWAKDNIRTNTVAPW  181 (259)
Q Consensus       154 K~a~~~~~~~~a~e~~~~gi~v~~v~pg  181 (259)
                      ++++.+|+|+++.|+-...+|...+.|.
T Consensus      1911 ~a~l~Gl~Ktl~~E~P~~~~r~vDl~~~ 1938 (2582)
T TIGR02813      1911 QAALAGLTKTLNHEWNAVFCRALDLAPK 1938 (2582)
T ss_pred             hhhHHHHHHhHHHHCCCCeEEEEeCCCC
Confidence            7899999999999996556777777664

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.53  E-value=0.0021  Score=54.77  Aligned_cols=113  Identities=13%  Similarity=0.086  Sum_probs=72.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCC--CEEEEeeCChhHHHHHHHHHHhc----CCcEEEEEecCCCHHHHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFG--AIVHTCSRNQIELDARLHEWKNK----GFKVTGSVCDLSSREQREKLIETVTSI   74 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~   74 (259)
                      |++.|.|+ |++|.+++..|+.+|  ..|++++|+.++.+....++.+.    ....... .  .+.+.       +   
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~-~--~~~~~-------l---   66 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK-A--GDYSD-------C---   66 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE-c--CCHHH-------h---
Confidence            57899997 999999999999999  58999999999888777776542    1122221 1  22221       1   


Q ss_pred             cCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC-CCCEEEEecCCC
Q 024994           75 FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVG  139 (259)
Q Consensus        75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~isS~~  139 (259)
                        ...|++|+++|.....   ..+.   .+.++.|..-.-.+.+.    +.+. ..+.++++|-..
T Consensus        67 --~~aDIVIitag~~~~~---g~~R---~dll~~N~~i~~~~~~~----i~~~~~~~~vivvsNP~  120 (306)
T cd05291          67 --KDADIVVITAGAPQKP---GETR---LDLLEKNAKIMKSIVPK----IKASGFDGIFLVASNPV  120 (306)
T ss_pred             --CCCCEEEEccCCCCCC---CCCH---HHHHHHHHHHHHHHHHH----HHHhCCCeEEEEecChH
Confidence              4789999999975321   1222   23444555444444444    3443 357788887654

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=97.52  E-value=0.0053  Score=51.09  Aligned_cols=138  Identities=14%  Similarity=0.160  Sum_probs=76.6

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHH-------------------HHHHHHHHhcCCc--EEEEEecCC
Q 024994            2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIEL-------------------DARLHEWKNKGFK--VTGSVCDLS   59 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~-------------------~~~~~~~~~~~~~--~~~~~~D~~   59 (259)
                      +|+|.|+ ||+|.++++.|+..|. ++++++.+.-..                   +...+.+.+....  +..+. +.-
T Consensus        32 ~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~-~~i  109 (268)
T PRK15116         32 HICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVD-DFI  109 (268)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEe-ccc
Confidence            5788887 8999999999999994 788888653222                   2222333322222  22221 222


Q ss_pred             CHHHHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCC
Q 024994           60 SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVG  139 (259)
Q Consensus        60 ~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~  139 (259)
                      +.+....++.       .++|+||.+....                     ..-..+.+.+    .+. +-.+|..++.+
T Consensus       110 ~~e~~~~ll~-------~~~D~VIdaiD~~---------------------~~k~~L~~~c----~~~-~ip~I~~gGag  156 (268)
T PRK15116        110 TPDNVAEYMS-------AGFSYVIDAIDSV---------------------RPKAALIAYC----RRN-KIPLVTTGGAG  156 (268)
T ss_pred             ChhhHHHHhc-------CCCCEEEEcCCCH---------------------HHHHHHHHHH----HHc-CCCEEEECCcc
Confidence            2333333221       2466666665521                     1112233333    333 35566665555


Q ss_pred             ccCCCCCChhhhhhHHHHHHHHHHHHHHHcc-CCce
Q 024994          140 GVRGIPSVSLYGAYKGAMNQLTKNLACEWAK-DNIR  174 (259)
Q Consensus       140 ~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~-~gi~  174 (259)
                      +..-....-.-..+|.....|++.++++|.+ +||+
T Consensus       157 ~k~dp~~~~~~di~~t~~~pla~~~R~~lr~~~~~~  192 (268)
T PRK15116        157 GQIDPTQIQVVDLAKTIQDPLAAKLRERLKSDFGVV  192 (268)
T ss_pred             cCCCCCeEEEEeeecccCChHHHHHHHHHHHhhCCC
Confidence            5433222334456677778899999999987 5764

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.49  E-value=0.0028  Score=54.15  Aligned_cols=77  Identities=22%  Similarity=0.353  Sum_probs=55.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      ++++|+|+++++|.++++.+...|++|+.++++.+..+.+ ...   +..   ...|..+.+..+.+.+...   ++.+|
T Consensus       168 ~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~---~~~---~~~~~~~~~~~~~~~~~~~---~~~~d  237 (342)
T cd08266         168 ETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA-KEL---GAD---YVIDYRKEDFVREVRELTG---KRGVD  237 (342)
T ss_pred             CEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCC---eEEecCChHHHHHHHHHhC---CCCCc
Confidence            3789999999999999999999999999999988776543 222   222   1245666555555443321   13699


Q ss_pred             EEEEcCC
Q 024994           81 ILINNAA   87 (259)
Q Consensus        81 ~vi~~ag   87 (259)
                      ++++++|
T Consensus       238 ~~i~~~g  244 (342)
T cd08266         238 VVVEHVG  244 (342)
T ss_pred             EEEECCc
Confidence            9999998

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.48  E-value=0.00061  Score=62.38  Aligned_cols=43  Identities=21%  Similarity=0.123  Sum_probs=38.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEW   44 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~   44 (259)
                      |++||+|+ ||+|++++..|++.|++|++++|+.++.+.+..++
T Consensus       380 k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l  422 (529)
T PLN02520        380 KLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV  422 (529)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence            58999999 69999999999999999999999988887776654

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=97.48  E-value=0.0064  Score=49.56  Aligned_cols=139  Identities=15%  Similarity=0.190  Sum_probs=78.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChh-------------------HHHHHHHHHHhcCC--cEEEEEecC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQI-------------------ELDARLHEWKNKGF--KVTGSVCDL   58 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~-------------------~~~~~~~~~~~~~~--~~~~~~~D~   58 (259)
                      ++++|.|. ||+|.++++.|+..|. +++++|.+.-                   +.+...+.+.+...  ++..+...+
T Consensus        12 ~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~~~i   90 (231)
T cd00755          12 AHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVEEFL   90 (231)
T ss_pred             CCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEeeeec
Confidence            36888888 8999999999999997 7888886542                   22333333333322  333333333


Q ss_pred             CCHHHHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCC
Q 024994           59 SSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSV  138 (259)
Q Consensus        59 ~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~  138 (259)
                      + .+....++.       .++|+||.+...                     +..-..+.+.+    .+. +-.+|...+.
T Consensus        91 ~-~~~~~~l~~-------~~~D~VvdaiD~---------------------~~~k~~L~~~c----~~~-~ip~I~s~g~  136 (231)
T cd00755          91 T-PDNSEDLLG-------GDPDFVVDAIDS---------------------IRAKVALIAYC----RKR-KIPVISSMGA  136 (231)
T ss_pred             C-HhHHHHHhc-------CCCCEEEEcCCC---------------------HHHHHHHHHHH----HHh-CCCEEEEeCC
Confidence            3 223222221       357777776542                     11112233333    333 2445554444


Q ss_pred             CccCCCCCChhhhhhHHHHHHHHHHHHHHHccCCce
Q 024994          139 GGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIR  174 (259)
Q Consensus       139 ~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~  174 (259)
                      ++.........-..+|.-...+++.+++++.++|++
T Consensus       137 g~~~dp~~i~i~di~~t~~~pla~~~R~~Lrk~~~~  172 (231)
T cd00755         137 GGKLDPTRIRVADISKTSGDPLARKVRKRLRKRGIF  172 (231)
T ss_pred             cCCCCCCeEEEccEeccccCcHHHHHHHHHHHcCCC
Confidence            443322222333456666778999999999988886

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.47  E-value=0.00031  Score=63.06  Aligned_cols=76  Identities=20%  Similarity=0.317  Sum_probs=50.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+++|||+++ +|.++|+.|+++|++|++.+++.........++...+..+  .....  ...+   ..       ..+|
T Consensus         6 k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~--~~~~~--~~~~---~~-------~~~d   70 (447)
T PRK02472          6 KKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKV--ICGSH--PLEL---LD-------EDFD   70 (447)
T ss_pred             CEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEE--EeCCC--CHHH---hc-------CcCC
Confidence            6899999976 9999999999999999999987654434444454433322  22111  1111   11       2489


Q ss_pred             EEEEcCCCCCC
Q 024994           81 ILINNAAIAFV   91 (259)
Q Consensus        81 ~vi~~ag~~~~   91 (259)
                      +||+++|+...
T Consensus        71 ~vV~s~gi~~~   81 (447)
T PRK02472         71 LMVKNPGIPYT   81 (447)
T ss_pred             EEEECCCCCCC
Confidence            99999998643

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.41  E-value=0.0013  Score=55.37  Aligned_cols=73  Identities=14%  Similarity=0.119  Sum_probs=52.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |+++|.|+ ||.|++++..|++.|. +|++++|+.++.+.+.+++........+..  ..   ++...       . ...
T Consensus       128 k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~--~~---~~~~~-------~-~~a  193 (284)
T PRK12549        128 ERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATA--GS---DLAAA-------L-AAA  193 (284)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEe--cc---chHhh-------h-CCC
Confidence            57999998 8899999999999997 799999999999888887754322222211  11   11111       1 368


Q ss_pred             cEEEEcCC
Q 024994           80 NILINNAA   87 (259)
Q Consensus        80 d~vi~~ag   87 (259)
                      |+|||+..
T Consensus       194 DiVInaTp  201 (284)
T PRK12549        194 DGLVHATP  201 (284)
T ss_pred             CEEEECCc
Confidence            99999953

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=97.41  E-value=0.0011  Score=54.00  Aligned_cols=76  Identities=14%  Similarity=0.221  Sum_probs=61.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+++|.|+ |-+|..+|+.|.+.|++|++++++++..++...+    ....+.+.+|-++.+-++++=-       ...|
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~----~~~~~~v~gd~t~~~~L~~agi-------~~aD   68 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD----ELDTHVVIGDATDEDVLEEAGI-------DDAD   68 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh----hcceEEEEecCCCHHHHHhcCC-------CcCC
Confidence            67888888 8999999999999999999999999988775432    1268888999999877666511       3688


Q ss_pred             EEEEcCCC
Q 024994           81 ILINNAAI   88 (259)
Q Consensus        81 ~vi~~ag~   88 (259)
                      ++|-..+.
T Consensus        69 ~vva~t~~   76 (225)
T COG0569          69 AVVAATGN   76 (225)
T ss_pred             EEEEeeCC
Confidence            88888774

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.37  E-value=0.0022  Score=54.06  Aligned_cols=75  Identities=20%  Similarity=0.187  Sum_probs=58.9

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCccE
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNI   81 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~   81 (259)
                      .++|-|++|..|.-++++|+.+|.+..+.+||..++..+..++   +..+...++.+  ++.+++.+        ...++
T Consensus         8 d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~L---G~~~~~~p~~~--p~~~~~~~--------~~~~V   74 (382)
T COG3268           8 DIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASL---GPEAAVFPLGV--PAALEAMA--------SRTQV   74 (382)
T ss_pred             eEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhc---CccccccCCCC--HHHHHHHH--------hcceE
Confidence            4789999999999999999999999999999999999887776   33444334443  54544444        36899


Q ss_pred             EEEcCCCC
Q 024994           82 LINNAAIA   89 (259)
Q Consensus        82 vi~~ag~~   89 (259)
                      |+||+|..
T Consensus        75 VlncvGPy   82 (382)
T COG3268          75 VLNCVGPY   82 (382)
T ss_pred             EEeccccc
Confidence            99999964

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.37  E-value=0.0011  Score=56.94  Aligned_cols=77  Identities=22%  Similarity=0.394  Sum_probs=52.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC-Cc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG-KL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~-~i   79 (259)
                      +++||+||+||+|...++.+...|++++++..+.++.+ .++++   +....   .|..+.+    +.+++.+..++ .+
T Consensus       144 ~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~l---GAd~v---i~y~~~~----~~~~v~~~t~g~gv  212 (326)
T COG0604         144 ETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKEL---GADHV---INYREED----FVEQVRELTGGKGV  212 (326)
T ss_pred             CEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhc---CCCEE---EcCCccc----HHHHHHHHcCCCCc
Confidence            47999999999999999999999977777776666665 44443   32222   2333332    44445444434 59


Q ss_pred             cEEEEcCCC
Q 024994           80 NILINNAAI   88 (259)
Q Consensus        80 d~vi~~ag~   88 (259)
                      |+++...|.
T Consensus       213 Dvv~D~vG~  221 (326)
T COG0604         213 DVVLDTVGG  221 (326)
T ss_pred             eEEEECCCH
Confidence            999999994

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.34  E-value=0.0016  Score=55.92  Aligned_cols=113  Identities=16%  Similarity=0.149  Sum_probs=67.3

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCC-------EEEEeeCChhH--HHHHHHHHHhcCCcEEEEEecCCCHHHHH--HHH--
Q 024994            2 TALVTGGTRGIGHATVEELARFGA-------IVHTCSRNQIE--LDARLHEWKNKGFKVTGSVCDLSSREQRE--KLI--   68 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~-------~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~--~~~--   68 (259)
                      ++.|+|++|.+|.+++..|+.+|.       .++++|++++.  ++.              ...|+.|.....  ...  
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~a~g--------------~~~Dl~d~~~~~~~~~~~~   66 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKVLEG--------------VVMELMDCAFPLLDGVVPT   66 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccccce--------------eEeehhcccchhcCceecc
Confidence            478999999999999999998664       49999986543  222              223443332100  000  


Q ss_pred             HHHHHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC--CCCEEEEecCCC
Q 024994           69 ETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS--GNGSIVFISSVG  139 (259)
Q Consensus        69 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~ii~isS~~  139 (259)
                      ....+.+ ...|+||++||....      +.+++.+.++.|+.-.-.+    .+.+.+.  .++.+|++|...
T Consensus        67 ~~~~~~~-~~aDiVVitAG~~~~------~~~tr~~ll~~N~~i~k~i----~~~i~~~~~~~~iiivvsNPv  128 (324)
T TIGR01758        67 HDPAVAF-TDVDVAILVGAFPRK------EGMERRDLLSKNVKIFKEQ----GRALDKLAKKDCKVLVVGNPA  128 (324)
T ss_pred             CChHHHh-CCCCEEEEcCCCCCC------CCCcHHHHHHHHHHHHHHH----HHHHHhhCCCCeEEEEeCCcH
Confidence            0001122 579999999997532      1123455666666544444    4444554  357777777644

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>cd00704 MDH Malate dehydrogenase

Probab=97.34  E-value=0.001  Score=57.07  Aligned_cols=113  Identities=13%  Similarity=0.114  Sum_probs=66.2

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCC-------EEEEeeCCh--hHHHHHHHHHHhcCCcEEEEEecCCCHHHHH----HHH
Q 024994            2 TALVTGGTRGIGHATVEELARFGA-------IVHTCSRNQ--IELDARLHEWKNKGFKVTGSVCDLSSREQRE----KLI   68 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~----~~~   68 (259)
                      ++.|||++|.+|..++..|+.+|.       .++++|++.  +.++..              ..|+.|.....    .+-
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~--------------~~Dl~d~~~~~~~~~~i~   67 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGV--------------VMELQDCAFPLLKGVVIT   67 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCcccee--------------eeehhhhcccccCCcEEe
Confidence            689999999999999999998763       499999987  433222              23333321000    000


Q ss_pred             HHHHHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC--CCCEEEEecCCC
Q 024994           69 ETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS--GNGSIVFISSVG  139 (259)
Q Consensus        69 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~ii~isS~~  139 (259)
                      ....+.+ ...|+||+.||.....   ..+   -.+.++.|..    +++.+.+.+.+.  .++.+|++|-..
T Consensus        68 ~~~~~~~-~~aDiVVitAG~~~~~---g~t---R~dll~~N~~----i~~~i~~~i~~~~~~~~iiivvsNPv  129 (323)
T cd00704          68 TDPEEAF-KDVDVAILVGAFPRKP---GME---RADLLRKNAK----IFKEQGEALNKVAKPTVKVLVVGNPA  129 (323)
T ss_pred             cChHHHh-CCCCEEEEeCCCCCCc---CCc---HHHHHHHhHH----HHHHHHHHHHHhCCCCeEEEEeCCcH
Confidence            0111112 5799999999975321   122   2334555554    444455555655  356777776544

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=97.25  E-value=0.00039  Score=45.42  Aligned_cols=33  Identities=27%  Similarity=0.289  Sum_probs=23.0

Q ss_pred             CEEEEEcCcchHHHH--HHHHHHHCCCEEEEeeCCh
Q 024994            1 MTALVTGGTRGIGHA--TVEELARFGAIVHTCSRNQ   34 (259)
Q Consensus         1 k~~lItG~s~giG~~--~a~~l~~~G~~V~~~~r~~   34 (259)
                      |+|||+|+|+|.|++  ++..| ..|++.+.+....
T Consensus        40 K~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~fEk   74 (78)
T PF12242_consen   40 KKVLVIGASTGYGLASRIAAAF-GAGADTIGVSFEK   74 (78)
T ss_dssp             SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE---
T ss_pred             ceEEEEecCCcccHHHHHHHHh-cCCCCEEEEeecc
Confidence            789999999999999  66666 7788888887644

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=97.24  E-value=0.0086  Score=54.35  Aligned_cols=81  Identities=20%  Similarity=0.191  Sum_probs=53.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCH-------------HHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR-------------EQREKL   67 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-------------~~~~~~   67 (259)
                      .+|+|+|+ |.+|...+..+...|++|++++++.++++... ++   +.+  ++..|..+.             +..++.
T Consensus       166 ~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~ae-sl---GA~--~v~i~~~e~~~~~~gya~~~s~~~~~~~  238 (509)
T PRK09424        166 AKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVE-SM---GAE--FLELDFEEEGGSGDGYAKVMSEEFIKAE  238 (509)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCe--EEEeccccccccccchhhhcchhHHHHH
Confidence            37899998 99999999999999999999999998876543 22   333  333333221             111222


Q ss_pred             HHHHHHHcCCCccEEEEcCCCC
Q 024994           68 IETVTSIFQGKLNILINNAAIA   89 (259)
Q Consensus        68 ~~~~~~~~~~~id~vi~~ag~~   89 (259)
                      .+...+.. +..|++|.+++..
T Consensus       239 ~~~~~~~~-~gaDVVIetag~p  259 (509)
T PRK09424        239 MALFAEQA-KEVDIIITTALIP  259 (509)
T ss_pred             HHHHHhcc-CCCCEEEECCCCC
Confidence            22222222 4699999999974

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.22  E-value=0.0052  Score=53.79  Aligned_cols=74  Identities=20%  Similarity=0.210  Sum_probs=53.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      ++++|.|+ |.+|..+++.+...|++|++++|+.++++.+....   +..   +..+..+.+.+.+.+        ...|
T Consensus       168 ~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~---g~~---v~~~~~~~~~l~~~l--------~~aD  232 (370)
T TIGR00518       168 GDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEF---GGR---IHTRYSNAYEIEDAV--------KRAD  232 (370)
T ss_pred             ceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhc---Cce---eEeccCCHHHHHHHH--------ccCC
Confidence            35888887 89999999999999999999999988766544332   111   223455555544433        3689


Q ss_pred             EEEEcCCCC
Q 024994           81 ILINNAAIA   89 (259)
Q Consensus        81 ~vi~~ag~~   89 (259)
                      +||++++..
T Consensus       233 vVI~a~~~~  241 (370)
T TIGR00518       233 LLIGAVLIP  241 (370)
T ss_pred             EEEEccccC
Confidence            999998653

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=97.22  E-value=0.0063  Score=51.84  Aligned_cols=147  Identities=12%  Similarity=0.024  Sum_probs=84.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC--EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      +++.|+|++|.+|.++|..|+.+|.  .++++|++  +.+....++...........+.-++  ++   .+.    + ..
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~~~i~~~~~~~--~~---y~~----~-~d   68 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTPAKVTGYLGPE--EL---KKA----L-KG   68 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCcceEEEecCCC--ch---HHh----c-CC
Confidence            5789999999999999999999984  79999988  4333333444321111111110111  01   111    1 57


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCcc------------CCCCC
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV------------RGIPS  146 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~------------~~~~~  146 (259)
                      -|++|.+||.... +  ..+   -.+.++.|..-.-.+.+.+.++   ..++.+|++|-....            .+.|.
T Consensus        69 aDivvitaG~~~k-~--g~t---R~dll~~N~~i~~~i~~~i~~~---~p~a~vivvtNPvDv~~~i~t~~~~~~s~~p~  139 (310)
T cd01337          69 ADVVVIPAGVPRK-P--GMT---RDDLFNINAGIVRDLATAVAKA---CPKALILIISNPVNSTVPIAAEVLKKAGVYDP  139 (310)
T ss_pred             CCEEEEeCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHHHh---CCCeEEEEccCchhhHHHHHHHHHHHhcCCCH
Confidence            9999999997522 1  122   3445667776666666555333   336788888887632            23343


Q ss_pred             ChhhhhhHHHHHHHHHHHHHHH
Q 024994          147 VSLYGAYKGAMNQLTKNLACEW  168 (259)
Q Consensus       147 ~~~Y~~sK~a~~~~~~~~a~e~  168 (259)
                      .-..+.+-.=-..|-..+++.+
T Consensus       140 ~rviG~~~LDs~R~~~~la~~l  161 (310)
T cd01337         140 KRLFGVTTLDVVRANTFVAELL  161 (310)
T ss_pred             HHEEeeechHHHHHHHHHHHHh
Confidence            3344443211225566666666

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.21  E-value=0.0028  Score=53.39  Aligned_cols=75  Identities=21%  Similarity=0.254  Sum_probs=52.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |+++|.|+ ||.+++++.+|++.|. +|+++.|+.++.+++.+++.... .+.    .+...++....       . ...
T Consensus       126 k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~-~~~----~~~~~~~~~~~-------~-~~~  191 (282)
T TIGR01809       126 FRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVG-VIT----RLEGDSGGLAI-------E-KAA  191 (282)
T ss_pred             ceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcC-cce----eccchhhhhhc-------c-cCC
Confidence            57899987 9999999999999997 79999999999888877664321 111    11111121111       1 368


Q ss_pred             cEEEEcCCCC
Q 024994           80 NILINNAAIA   89 (259)
Q Consensus        80 d~vi~~ag~~   89 (259)
                      |+|||+....
T Consensus       192 DiVInaTp~g  201 (282)
T TIGR01809       192 EVLVSTVPAD  201 (282)
T ss_pred             CEEEECCCCC
Confidence            9999998764

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.16  E-value=0.011  Score=50.65  Aligned_cols=113  Identities=11%  Similarity=0.043  Sum_probs=73.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC--EEEEeeCChhHHHHHHHHHHhcC---CcEEEEEecCCCHHHHHHHHHHHHHHc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKG---FKVTGSVCDLSSREQREKLIETVTSIF   75 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (259)
                      +++.|+|+ |.+|.+++..|+.+|.  .+++++++++.++....++++..   .++... .  .+.+.           +
T Consensus         7 ~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~-~--~~~~~-----------~   71 (315)
T PRK00066          7 NKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY-A--GDYSD-----------C   71 (315)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE-e--CCHHH-----------h
Confidence            47899998 9999999999999997  79999999998877777776532   122221 1  22221           1


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC-CCCEEEEecCCC
Q 024994           76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVG  139 (259)
Q Consensus        76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~isS~~  139 (259)
                       ..-|++|..||.....   ..+.   .+.++.|..-...+.    +.+.+. .++.+++++-..
T Consensus        72 -~~adivIitag~~~k~---g~~R---~dll~~N~~i~~~i~----~~i~~~~~~~~vivvsNP~  125 (315)
T PRK00066         72 -KDADLVVITAGAPQKP---GETR---LDLVEKNLKIFKSIV----GEVMASGFDGIFLVASNPV  125 (315)
T ss_pred             -CCCCEEEEecCCCCCC---CCCH---HHHHHHHHHHHHHHH----HHHHHhCCCeEEEEccCcH
Confidence             4789999999975321   2232   234555655444443    333443 357788877644

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.14  E-value=0.0038  Score=52.56  Aligned_cols=77  Identities=16%  Similarity=0.167  Sum_probs=52.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |+++|.|+ ||.+++++..|++.|+ +|+++.|+.++.+++.+.+............+   ..+.....        ...
T Consensus       128 k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~---~~~~~~~~--------~~~  195 (283)
T PRK14027        128 DSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVD---ARGIEDVI--------AAA  195 (283)
T ss_pred             CeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecC---HhHHHHHH--------hhc
Confidence            57899998 9999999999999997 79999999999888877764322111111122   11211111        358


Q ss_pred             cEEEEcCCCC
Q 024994           80 NILINNAAIA   89 (259)
Q Consensus        80 d~vi~~ag~~   89 (259)
                      |+|||+....
T Consensus       196 divINaTp~G  205 (283)
T PRK14027        196 DGVVNATPMG  205 (283)
T ss_pred             CEEEEcCCCC
Confidence            9999988653

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.13  E-value=0.0016  Score=51.12  Aligned_cols=78  Identities=27%  Similarity=0.299  Sum_probs=47.5

Q ss_pred             CEEEEEcC----------------cchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHH
Q 024994            1 MTALVTGG----------------TRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQR   64 (259)
Q Consensus         1 k~~lItG~----------------s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   64 (259)
                      |+||||+|                ||-.|.++|+++..+|++|+++..... +..        ...+..  .++.+.+++
T Consensus         4 k~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~--------p~~~~~--i~v~sa~em   72 (185)
T PF04127_consen    4 KKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LPP--------PPGVKV--IRVESAEEM   72 (185)
T ss_dssp             -EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS-------------TTEEE--EE-SSHHHH
T ss_pred             CEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc--------cccceE--EEecchhhh
Confidence            57888865                688999999999999999999887642 211        123433  456666665


Q ss_pred             HHHHHHHHHHcCCCccEEEEcCCCCCCCC
Q 024994           65 EKLIETVTSIFQGKLNILINNAAIAFVKP   93 (259)
Q Consensus        65 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~   93 (259)
                      .+.+.+   .+ ..-|++|++|++....+
T Consensus        73 ~~~~~~---~~-~~~Di~I~aAAVsDf~p   97 (185)
T PF04127_consen   73 LEAVKE---LL-PSADIIIMAAAVSDFRP   97 (185)
T ss_dssp             HHHHHH---HG-GGGSEEEE-SB--SEEE
T ss_pred             hhhhcc---cc-CcceeEEEecchhheee
Confidence            555544   44 35699999999875443

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.11  E-value=0.0031  Score=56.67  Aligned_cols=73  Identities=18%  Similarity=0.188  Sum_probs=53.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHH-HHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKL-IETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~~~~~~~~i   79 (259)
                      |+++|.|+ |.+|.++++.|.++|+.|++++++.+..+.+.+.     ..+.++.+|.++.+.++++ +        .+.
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~-----~~~~~~~gd~~~~~~l~~~~~--------~~a   66 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDR-----LDVRTVVGNGSSPDVLREAGA--------EDA   66 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhh-----cCEEEEEeCCCCHHHHHHcCC--------CcC
Confidence            67899988 9999999999999999999999999887665431     1456667777776555443 2        346


Q ss_pred             cEEEEcCC
Q 024994           80 NILINNAA   87 (259)
Q Consensus        80 d~vi~~ag   87 (259)
                      |.+|.+..
T Consensus        67 ~~vi~~~~   74 (453)
T PRK09496         67 DLLIAVTD   74 (453)
T ss_pred             CEEEEecC
Confidence            66666543

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=97.08  E-value=0.0032  Score=54.22  Aligned_cols=78  Identities=14%  Similarity=0.256  Sum_probs=52.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      +++||+|++|++|..+++.+...|++|+.+.++.++.+.+.+.+   +.. .+  .|..+.++..+.+.   +..++++|
T Consensus       153 ~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~l---Ga~-~v--i~~~~~~~~~~~i~---~~~~~gvd  223 (338)
T cd08295         153 ETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKL---GFD-DA--FNYKEEPDLDAALK---RYFPNGID  223 (338)
T ss_pred             CEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCc-ee--EEcCCcccHHHHHH---HhCCCCcE
Confidence            47999999999999999988889999999999888766554323   221 11  23222222222222   22224699


Q ss_pred             EEEEcCC
Q 024994           81 ILINNAA   87 (259)
Q Consensus        81 ~vi~~ag   87 (259)
                      +++.+.|
T Consensus       224 ~v~d~~g  230 (338)
T cd08295         224 IYFDNVG  230 (338)
T ss_pred             EEEECCC
Confidence            9999887

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=97.02  E-value=0.012  Score=50.32  Aligned_cols=115  Identities=16%  Similarity=0.187  Sum_probs=70.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC--EEEEeeCCh--hHHHHHHHHHHhc----CCcEEEEEecCC-CHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQ--IELDARLHEWKNK----GFKVTGSVCDLS-SREQREKLIETV   71 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~--~V~~~~r~~--~~~~~~~~~~~~~----~~~~~~~~~D~~-~~~~~~~~~~~~   71 (259)
                      |++.|+|++|.+|..++..|+..|.  .|++++|+.  ++++....++.+.    +...   ....+ |.+.    +   
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~---~i~~~~d~~~----l---   70 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDA---EIKISSDLSD----V---   70 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCc---EEEECCCHHH----h---
Confidence            6899999999999999999999986  499999955  4444433333321    1111   11112 2111    1   


Q ss_pred             HHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCC
Q 024994           72 TSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVG  139 (259)
Q Consensus        72 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~  139 (259)
                           ..-|++|.++|....   .+.+.   .+.++.|+.-...+.+.+.+.   ...+.+|++++..
T Consensus        71 -----~~aDiViitag~p~~---~~~~r---~dl~~~n~~i~~~~~~~i~~~---~~~~~viv~~npv  124 (309)
T cd05294          71 -----AGSDIVIITAGVPRK---EGMSR---LDLAKKNAKIVKKYAKQIAEF---APDTKILVVTNPV  124 (309)
T ss_pred             -----CCCCEEEEecCCCCC---CCCCH---HHHHHHHHHHHHHHHHHHHHH---CCCeEEEEeCCch
Confidence                 479999999997422   12232   234445655555555544332   2357888888754

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.01  E-value=0.0099  Score=47.46  Aligned_cols=32  Identities=22%  Similarity=0.360  Sum_probs=28.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRN   33 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~   33 (259)
                      ++++|.|+ ||+|.++++.|+..|. ++.++|++
T Consensus        22 ~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d   54 (202)
T TIGR02356        22 SHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDD   54 (202)
T ss_pred             CCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCC
Confidence            46888886 8999999999999997 89999887

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=97.00  E-value=0.0056  Score=51.31  Aligned_cols=74  Identities=22%  Similarity=0.288  Sum_probs=54.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++||.|+ ||-+++++..|++.|. +++++.|+.++.+++.+.+...+..+.  ..+..+.+..            ...
T Consensus       127 ~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~--~~~~~~~~~~------------~~~  191 (283)
T COG0169         127 KRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVE--AAALADLEGL------------EEA  191 (283)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcccccc--cccccccccc------------ccc
Confidence            57899998 9999999999999995 899999999999998888765443111  1222221110            137


Q ss_pred             cEEEEcCCCC
Q 024994           80 NILINNAAIA   89 (259)
Q Consensus        80 d~vi~~ag~~   89 (259)
                      |++||+....
T Consensus       192 dliINaTp~G  201 (283)
T COG0169         192 DLLINATPVG  201 (283)
T ss_pred             CEEEECCCCC
Confidence            9999999865

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.99  E-value=0.0045  Score=44.53  Aligned_cols=71  Identities=20%  Similarity=0.141  Sum_probs=54.4

Q ss_pred             EEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCccEE
Q 024994            3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNIL   82 (259)
Q Consensus         3 ~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~v   82 (259)
                      ++|.|. +.+|..+++.|.+.+.+|++++++++..+.+..+      .+.++.+|.++.+.++++--       .+.+.+
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~------~~~~i~gd~~~~~~l~~a~i-------~~a~~v   66 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREE------GVEVIYGDATDPEVLERAGI-------EKADAV   66 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHT------TSEEEES-TTSHHHHHHTTG-------GCESEE
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhc------ccccccccchhhhHHhhcCc-------cccCEE
Confidence            567777 6899999999999888999999999887665432      36788899999988776521       367888


Q ss_pred             EEcCC
Q 024994           83 INNAA   87 (259)
Q Consensus        83 i~~ag   87 (259)
                      |....
T Consensus        67 v~~~~   71 (116)
T PF02254_consen   67 VILTD   71 (116)
T ss_dssp             EEESS
T ss_pred             EEccC
Confidence            77766

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.99  E-value=0.005  Score=54.64  Aligned_cols=72  Identities=14%  Similarity=0.198  Sum_probs=52.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |+++|.|+ |+.|+.++++|+++|. +++++.|+.++.+.+..++..    .     .+...++....+        ...
T Consensus       182 kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~----~-----~~~~~~~l~~~l--------~~a  243 (414)
T PRK13940        182 KNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRN----A-----SAHYLSELPQLI--------KKA  243 (414)
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcC----C-----eEecHHHHHHHh--------ccC
Confidence            67999999 9999999999999996 799999999888777665421    1     111122222222        468


Q ss_pred             cEEEEcCCCCC
Q 024994           80 NILINNAAIAF   90 (259)
Q Consensus        80 d~vi~~ag~~~   90 (259)
                      |+||++.+..+
T Consensus       244 DiVI~aT~a~~  254 (414)
T PRK13940        244 DIIIAAVNVLE  254 (414)
T ss_pred             CEEEECcCCCC
Confidence            99999998653

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=96.98  E-value=0.015  Score=51.85  Aligned_cols=116  Identities=13%  Similarity=0.056  Sum_probs=74.5

Q ss_pred             EEEEEcCcchHHHHHHHHHHHC-------CC--EEEEeeCChhHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHH
Q 024994            2 TALVTGGTRGIGHATVEELARF-------GA--IVHTCSRNQIELDARLHEWKNKG-FKVTGSVCDLSSREQREKLIETV   71 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~-------G~--~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~   71 (259)
                      +|.|+|++|.+|.+++..|+..       |.  ++++++++.++++....++++.. .-..-+..-..+.+.        
T Consensus       102 KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~~~ye~--------  173 (444)
T PLN00112        102 NVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGIDPYEV--------  173 (444)
T ss_pred             EEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEecCCHHH--------
Confidence            5889999999999999999988       65  79999999999888777776532 100001101122222        


Q ss_pred             HHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHh--CCCCEEEEecCCC
Q 024994           72 TSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKA--SGNGSIVFISSVG  139 (259)
Q Consensus        72 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~~ii~isS~~  139 (259)
                         + ..-|++|..||.... +  ..+   -.+.++.|..-.-.+    .+.+.+  ..++.||++|-..
T Consensus       174 ---~-kdaDiVVitAG~prk-p--G~t---R~dLl~~N~~I~k~i----~~~I~~~a~p~~ivIVVsNPv  229 (444)
T PLN00112        174 ---F-QDAEWALLIGAKPRG-P--GME---RADLLDINGQIFAEQ----GKALNEVASRNVKVIVVGNPC  229 (444)
T ss_pred             ---h-CcCCEEEECCCCCCC-C--CCC---HHHHHHHHHHHHHHH----HHHHHHhcCCCeEEEEcCCcH
Confidence               1 579999999997422 1  223   234555665544444    444455  3467788877654

>cd08293 PTGR2 Prostaglandin reductase

Probab=96.97  E-value=0.0054  Score=52.87  Aligned_cols=77  Identities=13%  Similarity=0.194  Sum_probs=51.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      +++||+|++|++|..+++.+...|+ +|+.+.+++++.+.+.+++   +... +  .|..+ ++..+.+.+.   .++++
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~l---Ga~~-v--i~~~~-~~~~~~i~~~---~~~gv  225 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSEL---GFDA-A--INYKT-DNVAERLREL---CPEGV  225 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhc---CCcE-E--EECCC-CCHHHHHHHH---CCCCc
Confidence            3799999999999999988888898 7999999888776554433   2221 1  22222 1222222222   22469


Q ss_pred             cEEEEcCC
Q 024994           80 NILINNAA   87 (259)
Q Consensus        80 d~vi~~ag   87 (259)
                      |+++.+.|
T Consensus       226 d~vid~~g  233 (345)
T cd08293         226 DVYFDNVG  233 (345)
T ss_pred             eEEEECCC
Confidence            99999887

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=96.97  E-value=0.01  Score=51.28  Aligned_cols=77  Identities=21%  Similarity=0.353  Sum_probs=53.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCCh---------------------hHHHHHHHHHHhc--CCcEEEEEe
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQ---------------------IELDARLHEWKNK--GFKVTGSVC   56 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~---------------------~~~~~~~~~~~~~--~~~~~~~~~   56 (259)
                      ++|+|.|+ ||+|.++++.|+..|. +++++|++.                     .+.+.+.+.+...  ..++..+..
T Consensus        25 ~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~~~  103 (338)
T PRK12475         25 KHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPVVT  103 (338)
T ss_pred             CcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEEec
Confidence            47899998 8899999999999997 899999874                     2334444555443  345556666


Q ss_pred             cCCCHHHHHHHHHHHHHHcCCCccEEEEcCC
Q 024994           57 DLSSREQREKLIETVTSIFQGKLNILINNAA   87 (259)
Q Consensus        57 D~~~~~~~~~~~~~~~~~~~~~id~vi~~ag   87 (259)
                      |++. +.++.++        .+.|+||.+..
T Consensus       104 ~~~~-~~~~~~~--------~~~DlVid~~D  125 (338)
T PRK12475        104 DVTV-EELEELV--------KEVDLIIDATD  125 (338)
T ss_pred             cCCH-HHHHHHh--------cCCCEEEEcCC
Confidence            7753 3333332        36898888764

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=96.95  E-value=0.0065  Score=51.26  Aligned_cols=78  Identities=19%  Similarity=0.338  Sum_probs=53.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      ++++|+|+++++|..+++.+...|++|+.++++.+..+.+ +++   +..   ...+..+.+..+++.+.. .  ++++|
T Consensus       141 ~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~---g~~---~~~~~~~~~~~~~~~~~~-~--~~~~d  210 (323)
T cd05276         141 ETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RAL---GAD---VAINYRTEDFAEEVKEAT-G--GRGVD  210 (323)
T ss_pred             CEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc---CCC---EEEeCCchhHHHHHHHHh-C--CCCeE
Confidence            4789999999999999999999999999999988776554 332   221   123444333333332221 1  13699


Q ss_pred             EEEEcCCC
Q 024994           81 ILINNAAI   88 (259)
Q Consensus        81 ~vi~~ag~   88 (259)
                      .+++++|.
T Consensus       211 ~vi~~~g~  218 (323)
T cd05276         211 VILDMVGG  218 (323)
T ss_pred             EEEECCch
Confidence            99999983

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.95  E-value=0.0052  Score=53.24  Aligned_cols=78  Identities=19%  Similarity=0.349  Sum_probs=53.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |.+||.||+||+|.+.++-....|+..+++.+++++.+. ++++   +...   ..|..+++    .++++.+..++++|
T Consensus       159 ~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l-~k~l---GAd~---vvdy~~~~----~~e~~kk~~~~~~D  227 (347)
T KOG1198|consen  159 KSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLEL-VKKL---GADE---VVDYKDEN----VVELIKKYTGKGVD  227 (347)
T ss_pred             CeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHH-HHHc---CCcE---eecCCCHH----HHHHHHhhcCCCcc
Confidence            579999999999999999888889666666666666533 3333   2211   35666633    33444443236899


Q ss_pred             EEEEcCCCC
Q 024994           81 ILINNAAIA   89 (259)
Q Consensus        81 ~vi~~ag~~   89 (259)
                      +|+-|.|..
T Consensus       228 vVlD~vg~~  236 (347)
T KOG1198|consen  228 VVLDCVGGS  236 (347)
T ss_pred             EEEECCCCC
Confidence            999999963

>PRK04148 hypothetical protein; Provisional

Probab=96.95  E-value=0.01  Score=43.90  Aligned_cols=77  Identities=13%  Similarity=0.088  Sum_probs=54.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCH-----------------HH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR-----------------EQ   63 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----------------~~   63 (259)
                      +++++.|.+  .|.++|..|.+.|++|+++|.++...+...+.      .+.++..|+.+.                 .+
T Consensus        18 ~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~------~~~~v~dDlf~p~~~~y~~a~liysirpp~e   89 (134)
T PRK04148         18 KKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL------GLNAFVDDLFNPNLEIYKNAKLIYSIRPPRD   89 (134)
T ss_pred             CEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh------CCeEEECcCCCCCHHHHhcCCEEEEeCCCHH
Confidence            468999986  88889999999999999999999876654332      456777888763                 23


Q ss_pred             HHHHHHHHHHHcCCCccEEEEcCC
Q 024994           64 REKLIETVTSIFQGKLNILINNAA   87 (259)
Q Consensus        64 ~~~~~~~~~~~~~~~id~vi~~ag   87 (259)
                      ++..+-++.++.  +.|.+|..=+
T Consensus        90 l~~~~~~la~~~--~~~~~i~~l~  111 (134)
T PRK04148         90 LQPFILELAKKI--NVPLIIKPLS  111 (134)
T ss_pred             HHHHHHHHHHHc--CCCEEEEcCC
Confidence            444455555544  4566655443

>PRK14968 putative methyltransferase; Provisional

Probab=96.94  E-value=0.022  Score=44.51  Aligned_cols=76  Identities=18%  Similarity=0.137  Sum_probs=52.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCc---EEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFK---VTGSVCDLSSREQREKLIETVTSIFQG   77 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (259)
                      +++|-.|++.|.   ++..+++++.+|+.++++++..+...+.+...+..   +.++.+|+.+.     ..       ..
T Consensus        25 ~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-----~~-------~~   89 (188)
T PRK14968         25 DRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEP-----FR-------GD   89 (188)
T ss_pred             CEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEecccccc-----cc-------cc
Confidence            467888877776   56666667899999999998877666655543322   77888887542     11       13


Q ss_pred             CccEEEEcCCCCCC
Q 024994           78 KLNILINNAAIAFV   91 (259)
Q Consensus        78 ~id~vi~~ag~~~~   91 (259)
                      .+|.|+.|..+...
T Consensus        90 ~~d~vi~n~p~~~~  103 (188)
T PRK14968         90 KFDVILFNPPYLPT  103 (188)
T ss_pred             CceEEEECCCcCCC
Confidence            69999998876543

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=96.90  E-value=0.0049  Score=53.48  Aligned_cols=78  Identities=13%  Similarity=0.248  Sum_probs=51.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      .++||+|++|++|..+++.+...|++|+.++++.++.+.+.+++   +....   .|..+.+...+.+.+   ..++.+|
T Consensus       160 ~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~l---Ga~~v---i~~~~~~~~~~~i~~---~~~~gvD  230 (348)
T PLN03154        160 DSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFDEA---FNYKEEPDLDAALKR---YFPEGID  230 (348)
T ss_pred             CEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhc---CCCEE---EECCCcccHHHHHHH---HCCCCcE
Confidence            37999999999999999988889999999998888765543333   22211   233222222222222   2224699


Q ss_pred             EEEEcCC
Q 024994           81 ILINNAA   87 (259)
Q Consensus        81 ~vi~~ag   87 (259)
                      +++.+.|
T Consensus       231 ~v~d~vG  237 (348)
T PLN03154        231 IYFDNVG  237 (348)
T ss_pred             EEEECCC
Confidence            9999988

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.89  E-value=0.0053  Score=52.54  Aligned_cols=78  Identities=13%  Similarity=0.161  Sum_probs=52.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      .++||+|++|++|..+++.+...|++|+.+.++.++.+.+ +++   +....   .|..+.+...+.++..   .++++|
T Consensus       140 ~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~-~~l---Ga~~v---i~~~~~~~~~~~~~~~---~~~gvd  209 (325)
T TIGR02825       140 ETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL-KKL---GFDVA---FNYKTVKSLEETLKKA---SPDGYD  209 (325)
T ss_pred             CEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCCEE---EeccccccHHHHHHHh---CCCCeE
Confidence            3799999999999999998888999999999988776554 333   32211   2322222333333332   224699


Q ss_pred             EEEEcCCC
Q 024994           81 ILINNAAI   88 (259)
Q Consensus        81 ~vi~~ag~   88 (259)
                      +++.+.|.
T Consensus       210 vv~d~~G~  217 (325)
T TIGR02825       210 CYFDNVGG  217 (325)
T ss_pred             EEEECCCH
Confidence            99998873

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.86  E-value=0.028  Score=46.19  Aligned_cols=76  Identities=24%  Similarity=0.250  Sum_probs=50.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      +++||+|+++ +|..+++.+...|.+|+.+++++++.+.+ +++   +...   ..|..+.+....+.    ...++.+|
T Consensus       136 ~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~---~~~~~~~~~~~~~~----~~~~~~~d  203 (271)
T cd05188         136 DTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA-KEL---GADH---VIDYKEEDLEEELR----LTGGGGAD  203 (271)
T ss_pred             CEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHh---CCce---eccCCcCCHHHHHH----HhcCCCCC
Confidence            3789999988 99999999999999999999988765543 222   2111   12333333333322    11124699


Q ss_pred             EEEEcCCC
Q 024994           81 ILINNAAI   88 (259)
Q Consensus        81 ~vi~~ag~   88 (259)
                      +++++++.
T Consensus       204 ~vi~~~~~  211 (271)
T cd05188         204 VVIDAVGG  211 (271)
T ss_pred             EEEECCCC
Confidence            99999884

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.84  E-value=0.014  Score=44.86  Aligned_cols=85  Identities=15%  Similarity=0.122  Sum_probs=58.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHH-------hcCCcEEEEEecCCCHHHHHHHHHH--H
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK-------NKGFKVTGSVCDLSSREQREKLIET--V   71 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-------~~~~~~~~~~~D~~~~~~~~~~~~~--~   71 (259)
                      +++-+.|- |-.|..++++|.++|++|.+.+|++++.+++.++-.       +.-....++..-+.+.+.+++++..  +
T Consensus         2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i   80 (163)
T PF03446_consen    2 MKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENI   80 (163)
T ss_dssp             BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTH
T ss_pred             CEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHH
Confidence            46778888 899999999999999999999999988877654310       0011345666778888888888887  6


Q ss_pred             HHHcCCCccEEEEcCC
Q 024994           72 TSIFQGKLNILINNAA   87 (259)
Q Consensus        72 ~~~~~~~id~vi~~ag   87 (259)
                      .... .+=.++|.+..
T Consensus        81 ~~~l-~~g~iiid~sT   95 (163)
T PF03446_consen   81 LAGL-RPGKIIIDMST   95 (163)
T ss_dssp             GGGS--TTEEEEE-SS
T ss_pred             hhcc-ccceEEEecCC
Confidence            5544 34456666555

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.84  E-value=0.0099  Score=50.71  Aligned_cols=73  Identities=23%  Similarity=0.269  Sum_probs=49.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      .++||+|+++++|.++++.+...|++|+.+.++.+..+.+ .+   .+.. .+  .+.   ++..+.+.    .. ..+|
T Consensus       164 ~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~---~~~~-~~--~~~---~~~~~~~~----~~-~~~d  228 (332)
T cd08259         164 DTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL-KE---LGAD-YV--IDG---SKFSEDVK----KL-GGAD  228 (332)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HH---cCCc-EE--Eec---HHHHHHHH----hc-cCCC
Confidence            3789999999999999999999999999999887765443 22   1221 11  122   11222222    22 3699


Q ss_pred             EEEEcCCC
Q 024994           81 ILINNAAI   88 (259)
Q Consensus        81 ~vi~~ag~   88 (259)
                      ++++++|.
T Consensus       229 ~v~~~~g~  236 (332)
T cd08259         229 VVIELVGS  236 (332)
T ss_pred             EEEECCCh
Confidence            99999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.82  E-value=0.013  Score=49.54  Aligned_cols=44  Identities=18%  Similarity=0.061  Sum_probs=35.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCCh---hHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQ---IELDARLHEWK   45 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~---~~~~~~~~~~~   45 (259)
                      |++||.|+ ||-+++++..|+..|. +|+++.|+.   ++.+.+.+++.
T Consensus       125 k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~  172 (288)
T PRK12749        125 KTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVN  172 (288)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhh
Confidence            68999998 6779999999999997 899999985   46666666553

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.80  E-value=0.079  Score=44.97  Aligned_cols=37  Identities=27%  Similarity=0.285  Sum_probs=33.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELD   38 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~   38 (259)
                      |+++|.|. |++|+.+++.|...|++|++++|+.+..+
T Consensus       153 ~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~  189 (296)
T PRK08306        153 SNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLA  189 (296)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence            58999998 78999999999999999999999977643

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=96.77  E-value=0.029  Score=41.64  Aligned_cols=77  Identities=19%  Similarity=0.324  Sum_probs=53.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCCh-------------------hHHHHHHHHHHhc--CCcEEEEEecC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQ-------------------IELDARLHEWKNK--GFKVTGSVCDL   58 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~--~~~~~~~~~D~   58 (259)
                      ++++|.|+ |++|.++++.|+..|. ++.++|.+.                   .+.+.+.+.+++.  ..++..+..++
T Consensus         3 ~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~~   81 (135)
T PF00899_consen    3 KRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEKI   81 (135)
T ss_dssp             -EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESHC
T ss_pred             CEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeeccc
Confidence            47888888 9999999999999998 788887542                   2444555555533  45666777777


Q ss_pred             CCHHHHHHHHHHHHHHcCCCccEEEEcCC
Q 024994           59 SSREQREKLIETVTSIFQGKLNILINNAA   87 (259)
Q Consensus        59 ~~~~~~~~~~~~~~~~~~~~id~vi~~ag   87 (259)
                       +.+.....++        ..|++|.+..
T Consensus        82 -~~~~~~~~~~--------~~d~vi~~~d  101 (135)
T PF00899_consen   82 -DEENIEELLK--------DYDIVIDCVD  101 (135)
T ss_dssp             -SHHHHHHHHH--------TSSEEEEESS
T ss_pred             -cccccccccc--------CCCEEEEecC
Confidence             3344444442        5799988765

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.74  E-value=0.005  Score=49.81  Aligned_cols=44  Identities=25%  Similarity=0.254  Sum_probs=38.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEW   44 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~   44 (259)
                      |++.|+||+|.+|.++++.|++.|++|++.+|++++.+....+.
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~   44 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKA   44 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHH
Confidence            57899999999999999999999999999999998877665543

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=96.74  E-value=0.011  Score=49.15  Aligned_cols=117  Identities=11%  Similarity=0.070  Sum_probs=70.1

Q ss_pred             EEEEcCcchHHHHHHHHHHHCC----CEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            3 ALVTGGTRGIGHATVEELARFG----AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         3 ~lItG~s~giG~~~a~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      +.|+|++|.+|..++..|+..|    ..|+++|+++++++....+++...........-.++  +....+        ..
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~--d~~~~~--------~~   70 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITD--DPYEAF--------KD   70 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECC--chHHHh--------CC
Confidence            4689998899999999999999    689999999988877766665432111011111122  111122        47


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC-CCCEEEEecCCC
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVG  139 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~isS~~  139 (259)
                      -|+||..+|.....   ..+.   ...+..|+.-...+.+    .+.+. .++.+++++-..
T Consensus        71 aDiVv~t~~~~~~~---g~~r---~~~~~~n~~i~~~i~~----~i~~~~p~a~~i~~tNP~  122 (263)
T cd00650          71 ADVVIITAGVGRKP---GMGR---LDLLKRNVPIVKEIGD----NIEKYSPDAWIIVVSNPV  122 (263)
T ss_pred             CCEEEECCCCCCCc---CCCH---HHHHHHHHHHHHHHHH----HHHHHCCCeEEEEecCcH
Confidence            89999999975321   1121   2233344444444433    33433 457777776644

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=96.74  E-value=0.059  Score=48.97  Aligned_cols=80  Identities=23%  Similarity=0.220  Sum_probs=55.5

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCC-------------CHHHHHHHH
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLS-------------SREQREKLI   68 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-------------~~~~~~~~~   68 (259)
                      +++|.|+ |.+|...+..+...|++|++++++.++++... ++   +  ..++..|..             +.+..++..
T Consensus       166 kVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~-~l---G--a~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~  238 (511)
T TIGR00561       166 KVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ-SM---G--AEFLELDFKEEGGSGDGYAKVMSEEFIAAEM  238 (511)
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---C--CeEEeccccccccccccceeecCHHHHHHHH
Confidence            6899997 99999999999999999999999998765433 22   2  334444432             123344444


Q ss_pred             HHHHHHcCCCccEEEEcCCCC
Q 024994           69 ETVTSIFQGKLNILINNAAIA   89 (259)
Q Consensus        69 ~~~~~~~~~~id~vi~~ag~~   89 (259)
                      +...++. ...|++|+++-+.
T Consensus       239 ~~~~e~~-~~~DIVI~Talip  258 (511)
T TIGR00561       239 ELFAAQA-KEVDIIITTALIP  258 (511)
T ss_pred             HHHHHHh-CCCCEEEECcccC
Confidence            4444444 5799999999543

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=96.72  E-value=0.021  Score=49.31  Aligned_cols=33  Identities=30%  Similarity=0.450  Sum_probs=29.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCCh
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQ   34 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~   34 (259)
                      ++|+|.|+ ||+|.++++.|+..|. ++.++|++.
T Consensus        25 ~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~   58 (339)
T PRK07688         25 KHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDY   58 (339)
T ss_pred             CcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence            46899998 8999999999999998 899999864

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.68  E-value=0.01  Score=50.05  Aligned_cols=38  Identities=21%  Similarity=0.290  Sum_probs=34.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDA   39 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~   39 (259)
                      |+++|+|. |++|+++++.|...|++|++.+|+.++.+.
T Consensus       152 k~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~  189 (287)
T TIGR02853       152 SNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLAR  189 (287)
T ss_pred             CEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            68999999 779999999999999999999999876544

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=96.64  E-value=0.042  Score=46.99  Aligned_cols=115  Identities=10%  Similarity=0.013  Sum_probs=72.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC--EEEEeeCChhHHHHHHHHHHhcC---CcEEEEEecCCCHHHHHHHHHHHHHHc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKG---FKVTGSVCDLSSREQREKLIETVTSIF   75 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (259)
                      +++.|+|+ |.+|.+++..|+..|.  .+++++++.+.++....+++...   ....+..  -.|.+.           +
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~--~~dy~~-----------~   69 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEA--DKDYSV-----------T   69 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEE--CCCHHH-----------h
Confidence            47899996 9999999999999885  69999999887776666665432   1111111  122221           1


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC-CCCEEEEecCCCc
Q 024994           76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVGG  140 (259)
Q Consensus        76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~isS~~~  140 (259)
                       ...|++|.+||....   ...+.   .+.++.|..-.-.+    .+.+.+. .++.+++++....
T Consensus        70 -~~adivvitaG~~~k---~g~~R---~dll~~N~~i~~~~----~~~i~~~~p~~~vivvsNP~d  124 (312)
T cd05293          70 -ANSKVVIVTAGARQN---EGESR---LDLVQRNVDIFKGI----IPKLVKYSPNAILLVVSNPVD  124 (312)
T ss_pred             -CCCCEEEECCCCCCC---CCCCH---HHHHHHHHHHHHHH----HHHHHHhCCCcEEEEccChHH
Confidence             478999999997532   12333   23445555444334    4444443 4678888887553

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.64  E-value=0.021  Score=50.14  Aligned_cols=77  Identities=18%  Similarity=0.300  Sum_probs=49.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCC-------------------hhHHHHHHHHHHhcCC--cEEEEEecC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRN-------------------QIELDARLHEWKNKGF--KVTGSVCDL   58 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~-------------------~~~~~~~~~~~~~~~~--~~~~~~~D~   58 (259)
                      ++|+|.|+ ||+|.++++.|+..|. ++++++++                   ..+.+.+.+.+.+...  ++......+
T Consensus       136 ~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~~  214 (376)
T PRK08762        136 ARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQERV  214 (376)
T ss_pred             CcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEeccC
Confidence            46788866 8999999999999998 79999987                   3445555555544333  333333333


Q ss_pred             CCHHHHHHHHHHHHHHcCCCccEEEEcCC
Q 024994           59 SSREQREKLIETVTSIFQGKLNILINNAA   87 (259)
Q Consensus        59 ~~~~~~~~~~~~~~~~~~~~id~vi~~ag   87 (259)
                      ++ +.+..++        ...|+||++..
T Consensus       215 ~~-~~~~~~~--------~~~D~Vv~~~d  234 (376)
T PRK08762        215 TS-DNVEALL--------QDVDVVVDGAD  234 (376)
T ss_pred             Ch-HHHHHHH--------hCCCEEEECCC
Confidence            32 2333222        35788888765

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=96.62  E-value=0.014  Score=48.87  Aligned_cols=106  Identities=11%  Similarity=0.099  Sum_probs=72.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      .|++|++|+|.+|.-+.+--.-+|++|+.+.-.+++..-+.+++..   ..   -.|--.+    .+.+.+.+..+..+|
T Consensus       152 etvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGf---D~---~idyk~~----d~~~~L~~a~P~GID  221 (340)
T COG2130         152 ETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGF---DA---GIDYKAE----DFAQALKEACPKGID  221 (340)
T ss_pred             CEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCC---ce---eeecCcc----cHHHHHHHHCCCCeE
Confidence            4899999999999877776666899999999999888766655531   11   1233332    234444444556799


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCC
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI  144 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~  144 (259)
                      +.|-|.|..                          ++.+.++.|..  .+||+.++-++.+...
T Consensus       222 vyfeNVGg~--------------------------v~DAv~~~ln~--~aRi~~CG~IS~YN~~  257 (340)
T COG2130         222 VYFENVGGE--------------------------VLDAVLPLLNL--FARIPVCGAISQYNAP  257 (340)
T ss_pred             EEEEcCCch--------------------------HHHHHHHhhcc--ccceeeeeehhhcCCC
Confidence            999999952                          12345555543  4899998888776543

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=96.61  E-value=0.068  Score=45.62  Aligned_cols=113  Identities=10%  Similarity=0.035  Sum_probs=68.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCC--CEEEEeeCChhHHHHHHHHHHhcC---CcEEEEEecCCCHHHHHHHHHHHHHHc
Q 024994            1 MTALVTGGTRGIGHATVEELARFG--AIVHTCSRNQIELDARLHEWKNKG---FKVTGSVCDLSSREQREKLIETVTSIF   75 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (259)
                      |++.|.|+ |.+|..++..|+.+|  ..|++++++.++.+....++....   ...... .  .+.+.           +
T Consensus         1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~-~--~d~~~-----------l   65 (308)
T cd05292           1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIY-A--GDYAD-----------C   65 (308)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEe-e--CCHHH-----------h
Confidence            57889998 899999999999999  589999999887765444444321   111111 1  22211           1


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC-CCCEEEEecCCC
Q 024994           76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVG  139 (259)
Q Consensus        76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~isS~~  139 (259)
                       ...|++|.+++.....   ..+   ..+.+..|..-.-.+.+.+    .+. .++.+++++...
T Consensus        66 -~~aDiViita~~~~~~---~~~---r~dl~~~n~~i~~~~~~~l----~~~~~~giiiv~tNP~  119 (308)
T cd05292          66 -KGADVVVITAGANQKP---GET---RLDLLKRNVAIFKEIIPQI----LKYAPDAILLVVTNPV  119 (308)
T ss_pred             -CCCCEEEEccCCCCCC---CCC---HHHHHHHHHHHHHHHHHHH----HHHCCCeEEEEecCcH
Confidence             4789999999975321   122   2334445544444444433    333 357777776543

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=96.56  E-value=0.054  Score=47.54  Aligned_cols=116  Identities=13%  Similarity=0.057  Sum_probs=70.3

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCC-E----EEE----eeCChhHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHH
Q 024994            2 TALVTGGTRGIGHATVEELARFGA-I----VHT----CSRNQIELDARLHEWKNKG-FKVTGSVCDLSSREQREKLIETV   71 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~-~----V~~----~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~   71 (259)
                      ++.|+|++|.+|.+++..|+..|. .    |.+    ++++.++++....++.+.. ....-+..--.+.+.        
T Consensus        46 KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~~~y~~--------  117 (387)
T TIGR01757        46 NVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGIDPYEV--------  117 (387)
T ss_pred             EEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEecCCHHH--------
Confidence            589999999999999999998874 3    333    4888888887777776432 100001100112222        


Q ss_pred             HHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHh-C-CCCEEEEecCCC
Q 024994           72 TSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKA-S-GNGSIVFISSVG  139 (259)
Q Consensus        72 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~-~~~~ii~isS~~  139 (259)
                         + ..-|++|..||.... +  ..+   -.+.++.|..-.-.+    .+.+.+ . .++.+|++|-..
T Consensus       118 ---~-kdaDIVVitAG~prk-p--g~t---R~dll~~N~~I~k~i----~~~I~~~a~~~~iviVVsNPv  173 (387)
T TIGR01757       118 ---F-EDADWALLIGAKPRG-P--GME---RADLLDINGQIFADQ----GKALNAVASKNCKVLVVGNPC  173 (387)
T ss_pred             ---h-CCCCEEEECCCCCCC-C--CCC---HHHHHHHHHHHHHHH----HHHHHHhCCCCeEEEEcCCcH
Confidence               1 579999999997522 1  223   233555665544444    444455 3 457777777654

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.55  E-value=0.0083  Score=47.85  Aligned_cols=42  Identities=21%  Similarity=0.139  Sum_probs=36.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE   43 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~   43 (259)
                      |+++|+|.+ .+|.++++.|.+.|++|++.+++.++.+...+.
T Consensus        29 k~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~   70 (200)
T cd01075          29 KTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAEL   70 (200)
T ss_pred             CEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence            689999994 899999999999999999999998777665543

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=96.55  E-value=0.021  Score=41.76  Aligned_cols=77  Identities=18%  Similarity=0.266  Sum_probs=54.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHH-CCCEE-EEeeCCh----------------------hHHHHHHHHHHhcCCcEEEEEe
Q 024994            1 MTALVTGGTRGIGHATVEELAR-FGAIV-HTCSRNQ----------------------IELDARLHEWKNKGFKVTGSVC   56 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~-~G~~V-~~~~r~~----------------------~~~~~~~~~~~~~~~~~~~~~~   56 (259)
                      ++++|.|++|-.|+.+++.+.+ .+..+ ..++|+.                      ..+++..++    . .   +..
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~----~-D---VvI   72 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE----A-D---VVI   72 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH------S---EEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc----C-C---EEE
Confidence            4789999999999999999999 67775 4456665                      223333222    1 1   457


Q ss_pred             cCCCHHHHHHHHHHHHHHcCCCccEEEEcCCC
Q 024994           57 DLSSREQREKLIETVTSIFQGKLNILINNAAI   88 (259)
Q Consensus        57 D~~~~~~~~~~~~~~~~~~~~~id~vi~~ag~   88 (259)
                      |+|.++.+...++.+.+.   ++.+|+-..|.
T Consensus        73 DfT~p~~~~~~~~~~~~~---g~~~ViGTTG~  101 (124)
T PF01113_consen   73 DFTNPDAVYDNLEYALKH---GVPLVIGTTGF  101 (124)
T ss_dssp             EES-HHHHHHHHHHHHHH---T-EEEEE-SSS
T ss_pred             EcCChHHhHHHHHHHHhC---CCCEEEECCCC
Confidence            999999999998888774   68889988885

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=96.54  E-value=0.014  Score=57.19  Aligned_cols=75  Identities=16%  Similarity=0.149  Sum_probs=59.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCC-CE-------------EEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFG-AI-------------VHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREK   66 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G-~~-------------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   66 (259)
                      |+++|.|+ |.+|+..++.|++.. +.             |++++++.+..+.+.+..    .++..++.|++|.+++.+
T Consensus       570 ~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~----~~~~~v~lDv~D~e~L~~  644 (1042)
T PLN02819        570 QNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI----ENAEAVQLDVSDSESLLK  644 (1042)
T ss_pred             CcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc----CCCceEEeecCCHHHHHH
Confidence            57899997 999999999998863 23             888999988877665543    246678999999988777


Q ss_pred             HHHHHHHHcCCCccEEEEcCCC
Q 024994           67 LIETVTSIFQGKLNILINNAAI   88 (259)
Q Consensus        67 ~~~~~~~~~~~~id~vi~~ag~   88 (259)
                      +++        ++|+||++...
T Consensus       645 ~v~--------~~DaVIsalP~  658 (1042)
T PLN02819        645 YVS--------QVDVVISLLPA  658 (1042)
T ss_pred             hhc--------CCCEEEECCCc
Confidence            764        58999999864

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=96.53  E-value=0.043  Score=47.10  Aligned_cols=116  Identities=14%  Similarity=0.114  Sum_probs=68.3

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCC-------EEEEeeCCh--hHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHH
Q 024994            2 TALVTGGTRGIGHATVEELARFGA-------IVHTCSRNQ--IELDARLHEWKNKG-FKVTGSVCDLSSREQREKLIETV   71 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~   71 (259)
                      ++.|+|++|.+|.+++..|+..|.       .++++|+++  ++++....++.... ........--.+.+.        
T Consensus         5 KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~--------   76 (323)
T TIGR01759         5 RVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVATTDPEEA--------   76 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEecChHHH--------
Confidence            588999999999999999998884       699999865  33555555554321 100000000011111        


Q ss_pred             HHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC-C-CCEEEEecCCC
Q 024994           72 TSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-G-NGSIVFISSVG  139 (259)
Q Consensus        72 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~-~~~ii~isS~~  139 (259)
                         + ..-|+||.+||....   ...+   -.+.++.|..-.-.+    .+.+.+. . ++.++++|-..
T Consensus        77 ---~-~daDvVVitAG~~~k---~g~t---R~dll~~Na~i~~~i----~~~i~~~~~~~~iiivvsNPv  132 (323)
T TIGR01759        77 ---F-KDVDAALLVGAFPRK---PGME---RADLLSKNGKIFKEQ----GKALNKVAKKDVKVLVVGNPA  132 (323)
T ss_pred             ---h-CCCCEEEEeCCCCCC---CCCc---HHHHHHHHHHHHHHH----HHHHHhhCCCCeEEEEeCCcH
Confidence               1 478999999997422   1223   233555665544444    4444544 2 56777777543

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.53  E-value=0.017  Score=49.28  Aligned_cols=76  Identities=16%  Similarity=0.213  Sum_probs=50.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      .++||+|++|++|..+++.+...|++|+.+.+++++.+.+. ++   +... +  .|..+.+..++ +.   +..++.+|
T Consensus       145 ~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~-~~---Ga~~-v--i~~~~~~~~~~-v~---~~~~~gvd  213 (329)
T cd08294         145 ETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLK-EL---GFDA-V--FNYKTVSLEEA-LK---EAAPDGID  213 (329)
T ss_pred             CEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-Hc---CCCE-E--EeCCCccHHHH-HH---HHCCCCcE
Confidence            37899999999999999999899999999998887765543 22   3221 1  23333222222 22   22224699


Q ss_pred             EEEEcCC
Q 024994           81 ILINNAA   87 (259)
Q Consensus        81 ~vi~~ag   87 (259)
                      +++.+.|
T Consensus       214 ~vld~~g  220 (329)
T cd08294         214 CYFDNVG  220 (329)
T ss_pred             EEEECCC
Confidence            9999887

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=96.52  E-value=0.13  Score=44.12  Aligned_cols=120  Identities=11%  Similarity=-0.000  Sum_probs=70.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhc----CCcEEEEEecCCCHHHHHHHHHHHHHHc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNK----GFKVTGSVCDLSSREQREKLIETVTSIF   75 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (259)
                      +++.|+|+ |.+|..++..++.+|. .|++++++++..+....++...    +....+..  .+|.+.           +
T Consensus         7 ~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~--~~d~~~-----------l   72 (321)
T PTZ00082          7 RKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG--TNNYED-----------I   72 (321)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE--CCCHHH-----------h
Confidence            47899995 8899999999999995 8999999888653222222211    11222211  123221           1


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCc
Q 024994           76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGG  140 (259)
Q Consensus        76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~  140 (259)
                       ..-|+||.++|.......++.+.+. .+.+..|+.    +.+.+.+.+.+.. ++.++++|-...
T Consensus        73 -~~aDiVI~tag~~~~~~~~~~~~~r-~~~l~~n~~----i~~~i~~~i~~~~p~a~~iv~sNP~d  132 (321)
T PTZ00082         73 -AGSDVVIVTAGLTKRPGKSDKEWNR-DDLLPLNAK----IMDEVAEGIKKYCPNAFVIVITNPLD  132 (321)
T ss_pred             -CCCCEEEECCCCCCCCCCCcCCCCH-HHHHHHHHH----HHHHHHHHHHHHCCCeEEEEecCcHH
Confidence             4689999999975432222222122 334445543    4555555555543 457888887653

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.51  E-value=0.031  Score=49.20  Aligned_cols=70  Identities=14%  Similarity=0.236  Sum_probs=52.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCC-CEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++||.|+ |-+|.-+|++|+++| .+|+++.|+.++.+++++++.          ++....+.+...+        ...
T Consensus       179 ~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~----------~~~~~l~el~~~l--------~~~  239 (414)
T COG0373         179 KKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG----------AEAVALEELLEAL--------AEA  239 (414)
T ss_pred             CeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC----------CeeecHHHHHHhh--------hhC
Confidence            68999999 889999999999999 589999999999999888764          2222223333333        367


Q ss_pred             cEEEEcCCCC
Q 024994           80 NILINNAAIA   89 (259)
Q Consensus        80 d~vi~~ag~~   89 (259)
                      |+||.+.+-.
T Consensus       240 DvVissTsa~  249 (414)
T COG0373         240 DVVISSTSAP  249 (414)
T ss_pred             CEEEEecCCC
Confidence            8888887743

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.48  E-value=0.018  Score=51.46  Aligned_cols=43  Identities=21%  Similarity=0.313  Sum_probs=37.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEW   44 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~   44 (259)
                      ++++|.|+ |.+|..+++.|...|+ +|++++|+.++.+.+.+++
T Consensus       183 ~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~  226 (423)
T PRK00045        183 KKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF  226 (423)
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc
Confidence            57899987 9999999999999997 8999999998877666554

>PRK05442 malate dehydrogenase; Provisional

Probab=96.47  E-value=0.029  Score=48.20  Aligned_cols=114  Identities=12%  Similarity=0.097  Sum_probs=67.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-------EEEEeeCChh--HHHHHHHHHHhcC----CcEEEEEecCCCHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-------IVHTCSRNQI--ELDARLHEWKNKG----FKVTGSVCDLSSREQREKL   67 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-------~V~~~~r~~~--~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~   67 (259)
                      +++.|+|++|.+|.+++..|+..|.       .++++|+++.  +++....++.+..    ..+.+ ..  .+.+.    
T Consensus         5 ~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i-~~--~~y~~----   77 (326)
T PRK05442          5 VRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVI-TD--DPNVA----   77 (326)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEE-ec--ChHHH----
Confidence            4789999999999999999998764       6999998543  3444444443221    11111 11  11111    


Q ss_pred             HHHHHHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHh-C-CCCEEEEecCCC
Q 024994           68 IETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKA-S-GNGSIVFISSVG  139 (259)
Q Consensus        68 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~-~~~~ii~isS~~  139 (259)
                             + ..-|+||.+||.... +  ..+   -.+.++.|..    +.+.+.+.+.+ . .++.++++|-..
T Consensus        78 -------~-~daDiVVitaG~~~k-~--g~t---R~dll~~Na~----i~~~i~~~i~~~~~~~~iiivvsNPv  133 (326)
T PRK05442         78 -------F-KDADVALLVGARPRG-P--GME---RKDLLEANGA----IFTAQGKALNEVAARDVKVLVVGNPA  133 (326)
T ss_pred             -------h-CCCCEEEEeCCCCCC-C--CCc---HHHHHHHHHH----HHHHHHHHHHHhCCCCeEEEEeCCch
Confidence                   1 578999999997422 1  122   2344555554    44445555565 3 367788777644

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.46  E-value=0.045  Score=45.09  Aligned_cols=33  Identities=27%  Similarity=0.333  Sum_probs=28.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCCh
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQ   34 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~   34 (259)
                      ++|+|.|+ ||+|.++++.|+..|. ++.++|.+.
T Consensus        33 ~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~   66 (245)
T PRK05690         33 ARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDT   66 (245)
T ss_pred             CeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence            47899998 9999999999999997 788887654

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=96.46  E-value=0.036  Score=47.35  Aligned_cols=117  Identities=12%  Similarity=0.037  Sum_probs=67.5

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCC--EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            2 TALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      ++.|+|++|.+|.++|..|+.++.  .++++|+++  .+....++...........+.-.+  +...       .+ ..-
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~--a~g~a~DL~~~~~~~~i~~~~~~~--~~~~-------~~-~da   68 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG--AAGVAADLSHIPTAASVKGFSGEE--GLEN-------AL-KGA   68 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC--CcEEEchhhcCCcCceEEEecCCC--chHH-------Hc-CCC
Confidence            478999999999999999999885  799999877  222222232211111111101011  0011       12 579


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC-CCCEEEEecCCCc
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVGG  140 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~isS~~~  140 (259)
                      |++|.+||.... +  ..+   -.+.++.|..    +.+...+.+.+. .++.+|++|-...
T Consensus        69 DivvitaG~~~~-~--g~~---R~dll~~N~~----I~~~i~~~i~~~~p~~iiivvsNPvD  120 (312)
T TIGR01772        69 DVVVIPAGVPRK-P--GMT---RDDLFNVNAG----IVKDLVAAVAESCPKAMILVITNPVN  120 (312)
T ss_pred             CEEEEeCCCCCC-C--Ccc---HHHHHHHhHH----HHHHHHHHHHHhCCCeEEEEecCchh
Confidence            999999997522 1  122   2335566666    444444444443 4577888888764

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.46  E-value=0.035  Score=43.21  Aligned_cols=32  Identities=22%  Similarity=0.285  Sum_probs=28.3

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCCh
Q 024994            2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQ   34 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~   34 (259)
                      +++|.|+ ||+|.++++.|+..|. +++++|.+.
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            4788887 9999999999999998 599999876

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.42  E-value=0.023  Score=51.04  Aligned_cols=75  Identities=17%  Similarity=0.086  Sum_probs=58.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |.++|.|+ |.+|..+++.|.++|++|++++++++..+.+.++    ...+.++..|.++.+.++++--       .+.|
T Consensus       232 ~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~----~~~~~~i~gd~~~~~~L~~~~~-------~~a~  299 (453)
T PRK09496        232 KRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEE----LPNTLVLHGDGTDQELLEEEGI-------DEAD  299 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH----CCCCeEEECCCCCHHHHHhcCC-------ccCC
Confidence            46899999 9999999999999999999999998877665443    2346678899999877655321       3678


Q ss_pred             EEEEcCC
Q 024994           81 ILINNAA   87 (259)
Q Consensus        81 ~vi~~ag   87 (259)
                      .+|.+..
T Consensus       300 ~vi~~~~  306 (453)
T PRK09496        300 AFIALTN  306 (453)
T ss_pred             EEEECCC
Confidence            8876555

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.42  E-value=0.021  Score=50.93  Aligned_cols=70  Identities=19%  Similarity=0.248  Sum_probs=49.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCC-CEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      ++++|.|+ |.+|..+++.|...| .+|++++|+.++.+.+.+++.   ..  .+  +   .++..+.+        ...
T Consensus       181 ~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g---~~--~i--~---~~~l~~~l--------~~a  241 (417)
T TIGR01035       181 KKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELG---GE--AV--K---FEDLEEYL--------AEA  241 (417)
T ss_pred             CEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcC---Ce--Ee--e---HHHHHHHH--------hhC
Confidence            57899997 999999999999999 689999999888766655432   11  11  1   12332222        357


Q ss_pred             cEEEEcCCCC
Q 024994           80 NILINNAAIA   89 (259)
Q Consensus        80 d~vi~~ag~~   89 (259)
                      |+||.+.+..
T Consensus       242 DvVi~aT~s~  251 (417)
T TIGR01035       242 DIVISSTGAP  251 (417)
T ss_pred             CEEEECCCCC
Confidence            9999987743

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.39  E-value=0.05  Score=44.68  Aligned_cols=34  Identities=24%  Similarity=0.307  Sum_probs=28.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChh
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQI   35 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~   35 (259)
                      ++|+|.|+ ||+|..+++.|+..|. +++++|.+.-
T Consensus        25 ~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~v   59 (240)
T TIGR02355        25 SRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTV   59 (240)
T ss_pred             CcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcc
Confidence            36888887 8999999999999997 7888887653

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=96.38  E-value=0.027  Score=46.74  Aligned_cols=176  Identities=17%  Similarity=0.096  Sum_probs=100.3

Q ss_pred             CEEEEEcCcchHHHHHHH--HHHHCCCEEEEeeC-------Chh-----HHHHHHHHHHhcCCcEEEEEecCCCHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVE--ELARFGAIVHTCSR-------NQI-----ELDARLHEWKNKGFKVTGSVCDLSSREQREK   66 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~--~l~~~G~~V~~~~r-------~~~-----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   66 (259)
                      |+|||.|+|+|-|.+.--  .|- .|+.-+.+.-       ++.     ....+.+..++.+.-...+..|.-+.+--++
T Consensus        42 KkVLviGaSsGyGLa~RIsaaFG-~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~kGlyAksingDaFS~e~k~k  120 (398)
T COG3007          42 KKVLVIGASSGYGLAARISAAFG-PGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQKGLYAKSINGDAFSDEMKQK  120 (398)
T ss_pred             ceEEEEecCCcccHHHHHHHHhC-CCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHhcCceeeecccchhhHHHHHH
Confidence            789999999999987433  333 4555555431       111     0112222233445566777899999999999


Q ss_pred             HHHHHHHHcCCCccEEEEcCCCC-CCCC---------------------------------CCCCCHHHHHHHHHHhhHh
Q 024994           67 LIETVTSIFQGKLNILINNAAIA-FVKP---------------------------------TVDITAEDMSTVSSTNFES  112 (259)
Q Consensus        67 ~~~~~~~~~~~~id~vi~~ag~~-~~~~---------------------------------~~~~~~~~~~~~~~~n~~~  112 (259)
                      +++.+++.+ +++|.+|+.-.-. ...|                                 +...+.++++.+..+.=--
T Consensus       121 vIe~Ik~~~-g~vDlvvYSlAsp~Rk~pktgev~~SalKpIg~a~~~~~ldt~kd~i~e~~lepAseqEI~~Tv~VMGGe  199 (398)
T COG3007         121 VIEAIKQDF-GKVDLVVYSLASPRRKHPKTGEVFRSALKPIGEAVSGRTLDTEKDVIIEATLEPASEQEIADTVAVMGGE  199 (398)
T ss_pred             HHHHHHHhh-ccccEEEEeccCccccCCCcchhhHhhhcchhhhccccccccccceeeeeecccccHHHHHHHHHhhCcc
Confidence            999999999 6999998765422 1000                                 0111334444333321111


Q ss_pred             HH-HHHHHHHHHhHhCCCCEEEEecCCCcc--CCCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEE
Q 024994          113 VF-HLSQLAHPLFKASGNGSIVFISSVGGV--RGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV  178 (259)
Q Consensus       113 ~~-~~~~~~~~~~~~~~~~~ii~isS~~~~--~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v  178 (259)
                      -| .++.+++..-.-..+.+-|-.|-.+..  ++.-....-+.+|.=++.-++.+...++..|-+.+..
T Consensus       200 DWq~WidaLl~advlaeg~kTiAfsYiG~~iT~~IYw~GtiG~AK~DLd~~~~~inekLa~~gG~A~vs  268 (398)
T COG3007         200 DWQMWIDALLEADVLAEGAKTIAFSYIGEKITHPIYWDGTIGRAKKDLDQKSLAINEKLAALGGGARVS  268 (398)
T ss_pred             hHHHHHHHHHhccccccCceEEEEEecCCccccceeeccccchhhhcHHHHHHHHHHHHHhcCCCeeee
Confidence            11 234444322222223343433333322  3333456779999999999999999998875454443

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=96.35  E-value=0.015  Score=45.49  Aligned_cols=43  Identities=21%  Similarity=0.237  Sum_probs=35.9

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHH
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK   45 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~   45 (259)
                      +|.|.|+ |-+|..+|..++..|++|.+++++.+.++...+.+.
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~   43 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIE   43 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHH
Confidence            5778888 999999999999999999999999998877665554

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=96.35  E-value=0.0081  Score=44.14  Aligned_cols=85  Identities=14%  Similarity=0.097  Sum_probs=54.3

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEe-eCChhHHHHHHHHHHh--------cCCcEEEEEecCCCHHHHHHHHHHHH
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTC-SRNQIELDARLHEWKN--------KGFKVTGSVCDLSSREQREKLIETVT   72 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~~~~   72 (259)
                      ++-|.|+ |-+|.++++.|.+.|+.|..+ +|+.+..+.+...+..        .-.....+-.-+.|. .+..+++++.
T Consensus        12 ~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpDd-aI~~va~~La   89 (127)
T PF10727_consen   12 KIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPDD-AIAEVAEQLA   89 (127)
T ss_dssp             EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-CC-HHHHHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEechH-HHHHHHHHHH
Confidence            5788888 999999999999999998776 5666565555444321        112344555666664 7888888887


Q ss_pred             HH--cCCCccEEEEcCCCC
Q 024994           73 SI--FQGKLNILINNAAIA   89 (259)
Q Consensus        73 ~~--~~~~id~vi~~ag~~   89 (259)
                      +.  + .+=.+|+|+.|-.
T Consensus        90 ~~~~~-~~g~iVvHtSGa~  107 (127)
T PF10727_consen   90 QYGAW-RPGQIVVHTSGAL  107 (127)
T ss_dssp             CC--S--TT-EEEES-SS-
T ss_pred             HhccC-CCCcEEEECCCCC
Confidence            65  2 2346999999964

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=96.34  E-value=0.077  Score=42.22  Aligned_cols=74  Identities=22%  Similarity=0.141  Sum_probs=48.8

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChh-HHHHHHHHHHhc-----------CCcEEEEEecCCCHHHHHHHHH
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQI-ELDARLHEWKNK-----------GFKVTGSVCDLSSREQREKLIE   69 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~   69 (259)
                      +....||+|-||.++++.|++.|+.|++.+|+.+ +.+...+.+.-.           ...+.++.+-.   +.+..+++
T Consensus         2 ~~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP~---~a~~~v~~   78 (211)
T COG2085           2 MIIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVPF---EAIPDVLA   78 (211)
T ss_pred             cEEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEeccH---HHHHhHHH
Confidence            4455677799999999999999999999866554 444444444311           13444544444   56666777


Q ss_pred             HHHHHcCCC
Q 024994           70 TVTSIFQGK   78 (259)
Q Consensus        70 ~~~~~~~~~   78 (259)
                      ++.+.++++
T Consensus        79 ~l~~~~~~K   87 (211)
T COG2085          79 ELRDALGGK   87 (211)
T ss_pred             HHHHHhCCe
Confidence            777766434

>PLN02602 lactate dehydrogenase

Probab=96.32  E-value=0.079  Score=45.99  Aligned_cols=114  Identities=10%  Similarity=0.073  Sum_probs=71.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC--EEEEeeCChhHHHHHHHHHHhcC---CcEEEEEecCCCHHHHHHHHHHHHHHc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKG---FKVTGSVCDLSSREQREKLIETVTSIF   75 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (259)
                      +++.|+|+ |.+|.+++..|+.+|.  .++++|.++++++....++....   ... -+.. -.+.+.       +    
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~-~i~~-~~dy~~-------~----  103 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRT-KILA-STDYAV-------T----  103 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCC-EEEe-CCCHHH-------h----
Confidence            37899996 9999999999999885  69999999988777666666431   111 1111 122221       1    


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC-CCCEEEEecCCC
Q 024994           76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVG  139 (259)
Q Consensus        76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~isS~~  139 (259)
                       ..-|+||.+||.....   ..+.   .+.+..|..-.-.+    .+.+.+. .++.+|+++-..
T Consensus       104 -~daDiVVitAG~~~k~---g~tR---~dll~~N~~I~~~i----~~~I~~~~p~~ivivvtNPv  157 (350)
T PLN02602        104 -AGSDLCIVTAGARQIP---GESR---LNLLQRNVALFRKI----IPELAKYSPDTILLIVSNPV  157 (350)
T ss_pred             -CCCCEEEECCCCCCCc---CCCH---HHHHHHHHHHHHHH----HHHHHHHCCCeEEEEecCch
Confidence             4789999999975321   2232   23344554444444    4444443 367888888654

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=96.31  E-value=0.027  Score=48.03  Aligned_cols=77  Identities=14%  Similarity=0.217  Sum_probs=51.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      .++||.|+++++|.++++.+.+.|++|+.+.++.++.+.+.+.+   +.. .+  .|..+.+..++    +.+..++++|
T Consensus       147 ~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~---g~~-~~--~~~~~~~~~~~----v~~~~~~~~d  216 (329)
T cd05288         147 ETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEEL---GFD-AA--INYKTPDLAEA----LKEAAPDGID  216 (329)
T ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhc---CCc-eE--EecCChhHHHH----HHHhccCCce
Confidence            37899999999999999999999999999998887765443222   211 11  22333222222    2222224699


Q ss_pred             EEEEcCC
Q 024994           81 ILINNAA   87 (259)
Q Consensus        81 ~vi~~ag   87 (259)
                      +++++.|
T Consensus       217 ~vi~~~g  223 (329)
T cd05288         217 VYFDNVG  223 (329)
T ss_pred             EEEEcch
Confidence            9999887

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.31  E-value=0.051  Score=43.72  Aligned_cols=32  Identities=22%  Similarity=0.322  Sum_probs=28.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRN   33 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~   33 (259)
                      ++++|.|+ ||+|.++++.|+..|. +++++|.+
T Consensus        29 ~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         29 AKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             CCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            36889987 9999999999999998 59998877

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.31  E-value=0.03  Score=47.32  Aligned_cols=76  Identities=21%  Similarity=0.333  Sum_probs=50.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC-CCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ-GKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~~i   79 (259)
                      ++++|+|+++++|..+++.+...|++|+.+.++++..+.+ .++   +.+..   .+..+.+..+.    +.+..+ .++
T Consensus       141 ~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~~---~~~~~~~~~~~----~~~~~~~~~~  209 (325)
T TIGR02824       141 ETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EAL---GADIA---INYREEDFVEV----VKAETGGKGV  209 (325)
T ss_pred             CEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCcEE---EecCchhHHHH----HHHHcCCCCe
Confidence            4789999999999999999999999999999988776533 332   22111   23333222222    222222 359


Q ss_pred             cEEEEcCC
Q 024994           80 NILINNAA   87 (259)
Q Consensus        80 d~vi~~ag   87 (259)
                      |.+++++|
T Consensus       210 d~~i~~~~  217 (325)
T TIGR02824       210 DVILDIVG  217 (325)
T ss_pred             EEEEECCc
Confidence            99999987

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.30  E-value=0.062  Score=43.76  Aligned_cols=77  Identities=19%  Similarity=0.277  Sum_probs=49.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCCh-------------------hHHHHHHHHHHhcCC--cEEEEEecC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQ-------------------IELDARLHEWKNKGF--KVTGSVCDL   58 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~--~~~~~~~D~   58 (259)
                      ++|+|.|+ ||+|.++++.|+..|. +++++|.+.                   .+.+.+.+.+++...  ++..+..++
T Consensus        22 ~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~~~i  100 (228)
T cd00757          22 ARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYNERL  100 (228)
T ss_pred             CcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEeccee
Confidence            47889986 9999999999999997 677776432                   334444555554433  444444455


Q ss_pred             CCHHHHHHHHHHHHHHcCCCccEEEEcCC
Q 024994           59 SSREQREKLIETVTSIFQGKLNILINNAA   87 (259)
Q Consensus        59 ~~~~~~~~~~~~~~~~~~~~id~vi~~ag   87 (259)
                      + .+....++        .+.|+||.+..
T Consensus       101 ~-~~~~~~~~--------~~~DvVi~~~d  120 (228)
T cd00757         101 D-AENAEELI--------AGYDLVLDCTD  120 (228)
T ss_pred             C-HHHHHHHH--------hCCCEEEEcCC
Confidence            3 23333322        35788888766

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.29  E-value=0.028  Score=48.08  Aligned_cols=70  Identities=17%  Similarity=0.234  Sum_probs=50.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCC-CEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      ++++|.|+ |.+|..+++.|.+.| .+|++++|+.++.+++.+++.   .  ..     .+.++....+        ...
T Consensus       179 ~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g---~--~~-----~~~~~~~~~l--------~~a  239 (311)
T cd05213         179 KKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELG---G--NA-----VPLDELLELL--------NEA  239 (311)
T ss_pred             CEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcC---C--eE-----EeHHHHHHHH--------hcC
Confidence            57899988 999999999999977 579999999988877766542   1  11     1222333322        357


Q ss_pred             cEEEEcCCCC
Q 024994           80 NILINNAAIA   89 (259)
Q Consensus        80 d~vi~~ag~~   89 (259)
                      |+||.+.+..
T Consensus       240 DvVi~at~~~  249 (311)
T cd05213         240 DVVISATGAP  249 (311)
T ss_pred             CEEEECCCCC
Confidence            9999999854

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.28  E-value=0.04  Score=47.25  Aligned_cols=71  Identities=23%  Similarity=0.302  Sum_probs=50.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      +.++|+|.+ |+|...++.....|++|++++|++++++... ++   +....   .+-+|.+..+.+-+        .+|
T Consensus       168 ~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~-~l---GAd~~---i~~~~~~~~~~~~~--------~~d  231 (339)
T COG1064         168 KWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAK-KL---GADHV---INSSDSDALEAVKE--------IAD  231 (339)
T ss_pred             CEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHH-Hh---CCcEE---EEcCCchhhHHhHh--------hCc
Confidence            478999997 9999988888889999999999999986653 22   22222   23334444433322        389


Q ss_pred             EEEEcCC
Q 024994           81 ILINNAA   87 (259)
Q Consensus        81 ~vi~~ag   87 (259)
                      +++.+++
T Consensus       232 ~ii~tv~  238 (339)
T COG1064         232 AIIDTVG  238 (339)
T ss_pred             EEEECCC
Confidence            9999988

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=96.27  E-value=0.08  Score=45.01  Aligned_cols=112  Identities=13%  Similarity=0.029  Sum_probs=69.8

Q ss_pred             EEEEcCcchHHHHHHHHHHHCC--CEEEEeeCChhHHHHHHHHHHhcCCc---EEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024994            3 ALVTGGTRGIGHATVEELARFG--AIVHTCSRNQIELDARLHEWKNKGFK---VTGSVCDLSSREQREKLIETVTSIFQG   77 (259)
Q Consensus         3 ~lItG~s~giG~~~a~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (259)
                      +.|.|+ |++|.+++..|+.+|  ..++++++++++.+....++.+....   ......  .|.+.    +        .
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~~~~----l--------~   65 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GDYAD----A--------A   65 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CCHHH----h--------C
Confidence            357787 689999999999999  57999999998888777777643211   111111  22211    1        5


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC-CCCEEEEecCCC
Q 024994           78 KLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVG  139 (259)
Q Consensus        78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~isS~~  139 (259)
                      .-|++|.++|....   ...+.   .+.+..|+.-...+.    +.+.+. .++.+++++...
T Consensus        66 ~aDiVIitag~p~~---~~~~R---~~l~~~n~~i~~~~~----~~i~~~~p~~~viv~sNP~  118 (300)
T cd00300          66 DADIVVITAGAPRK---PGETR---LDLINRNAPILRSVI----TNLKKYGPDAIILVVSNPV  118 (300)
T ss_pred             CCCEEEEcCCCCCC---CCCCH---HHHHHHHHHHHHHHH----HHHHHhCCCeEEEEccChH
Confidence            78999999997532   12222   233445554444444    444443 467888888654

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.26  E-value=0.013  Score=45.24  Aligned_cols=34  Identities=21%  Similarity=0.302  Sum_probs=30.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCCh
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ   34 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~   34 (259)
                      |+++|.|++.-+|..+++.|.++|++|.++.|+.
T Consensus        45 k~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~   78 (168)
T cd01080          45 KKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT   78 (168)
T ss_pred             CEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc
Confidence            6899999976789999999999999999999875

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.20  E-value=0.034  Score=47.03  Aligned_cols=77  Identities=16%  Similarity=0.221  Sum_probs=50.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      ++++|+|+++++|.++++.+...|++|+.++++.++.+.+ .+.   +.. .+  .+.......+++.+ ...  +..+|
T Consensus       146 ~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~---g~~-~~--~~~~~~~~~~~~~~-~~~--~~~~d  215 (328)
T cd08268         146 DSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL-LAL---GAA-HV--IVTDEEDLVAEVLR-ITG--GKGVD  215 (328)
T ss_pred             CEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc---CCC-EE--EecCCccHHHHHHH-HhC--CCCce
Confidence            4789999999999999999999999999999988766554 322   221 11  22222222222222 111  13599


Q ss_pred             EEEEcCC
Q 024994           81 ILINNAA   87 (259)
Q Consensus        81 ~vi~~ag   87 (259)
                      +++++.+
T Consensus       216 ~vi~~~~  222 (328)
T cd08268         216 VVFDPVG  222 (328)
T ss_pred             EEEECCc
Confidence            9999988

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.19  E-value=0.021  Score=48.08  Aligned_cols=35  Identities=23%  Similarity=0.275  Sum_probs=31.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChh
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI   35 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~   35 (259)
                      |+++|.|.|+-.|+.++..|.++|++|+++.|...
T Consensus       160 k~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~  194 (283)
T PRK14192        160 KHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQ  194 (283)
T ss_pred             CEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCch
Confidence            68999999888999999999999999999988443

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.18  E-value=0.069  Score=46.54  Aligned_cols=33  Identities=21%  Similarity=0.318  Sum_probs=28.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCCh
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQ   34 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~   34 (259)
                      ++|+|.|+ ||+|.++++.|+..|. ++.++|.+.
T Consensus        29 ~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~   62 (355)
T PRK05597         29 AKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDT   62 (355)
T ss_pred             CeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            47899988 9999999999999997 788888654

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.18  E-value=0.014  Score=52.88  Aligned_cols=43  Identities=23%  Similarity=0.280  Sum_probs=37.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEW   44 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~   44 (259)
                      |+++|+|+ ||+|++++..|.+.|++|++++|+.++.+.+.+++
T Consensus       333 k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~  375 (477)
T PRK09310        333 QHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRC  375 (477)
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence            57999996 79999999999999999999999988877665543

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=96.17  E-value=0.11  Score=44.22  Aligned_cols=85  Identities=15%  Similarity=0.113  Sum_probs=57.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHH----------HHhcCCcEEEEEecCCCHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE----------WKNKGFKVTGSVCDLSSREQREKLIET   70 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~----------~~~~~~~~~~~~~D~~~~~~~~~~~~~   70 (259)
                      |++-|.|. |-+|.++++.|+++|++|++.+|+.++.+.+.+.          +.+.-....++..-+.+. .++.++++
T Consensus         1 M~Ig~IGl-G~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~~~s~~~~~~~~~~~dvIi~~vp~~-~~~~v~~~   78 (298)
T TIGR00872         1 MQLGLIGL-GRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTGVANLRELSQRLSAPRVVWVMVPHG-IVDAVLEE   78 (298)
T ss_pred             CEEEEEcc-hHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcccCCHHHHHhhcCCCCEEEEEcCch-HHHHHHHH
Confidence            46778886 8899999999999999999999999887665432          111001123333334454 77778887


Q ss_pred             HHHHcCCCccEEEEcCCC
Q 024994           71 VTSIFQGKLNILINNAAI   88 (259)
Q Consensus        71 ~~~~~~~~id~vi~~ag~   88 (259)
                      +...+ .+=+++|++...
T Consensus        79 l~~~l-~~g~ivid~st~   95 (298)
T TIGR00872        79 LAPTL-EKGDIVIDGGNS   95 (298)
T ss_pred             HHhhC-CCCCEEEECCCC
Confidence            77665 233677776554

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=96.16  E-value=0.08  Score=44.96  Aligned_cols=144  Identities=13%  Similarity=0.096  Sum_probs=83.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC--EEEEeeCChhHHHHHHHHHHhcCC---cEEEEEecCCCHHHHHHHHHHHHHHc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKGF---KVTGSVCDLSSREQREKLIETVTSIF   75 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (259)
                      +++.|+|+ |+||.+++..|+.++.  .++++++++++.+-...++.....   .-..+..| .+.+.    +       
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~y~~----~-------   67 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GDYED----L-------   67 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CChhh----h-------
Confidence            57899999 9999999999988874  799999997766655555543210   01111222 12111    1       


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC-CCCEEEEecCCCcc--------CCCCC
Q 024994           76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVGGV--------RGIPS  146 (259)
Q Consensus        76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~isS~~~~--------~~~~~  146 (259)
                       ..-|+++-.||......   ++.   .+.++.|..-.-.+.+.+    .+. .++.++.++-....        .+.|.
T Consensus        68 -~~aDiVvitAG~prKpG---mtR---~DLl~~Na~I~~~i~~~i----~~~~~d~ivlVvtNPvD~~ty~~~k~sg~p~  136 (313)
T COG0039          68 -KGADIVVITAGVPRKPG---MTR---LDLLEKNAKIVKDIAKAI----AKYAPDAIVLVVTNPVDILTYIAMKFSGFPK  136 (313)
T ss_pred             -cCCCEEEEeCCCCCCCC---CCH---HHHHHhhHHHHHHHHHHH----HhhCCCeEEEEecCcHHHHHHHHHHhcCCCc
Confidence             47899999999753221   233   334556655444444444    443 35777777765432        22232


Q ss_pred             Ch-hhhhhHHHHHHHHHHHHHHH
Q 024994          147 VS-LYGAYKGAMNQLTKNLACEW  168 (259)
Q Consensus       147 ~~-~Y~~sK~a~~~~~~~~a~e~  168 (259)
                      .. .-+.+..--..|-..++..+
T Consensus       137 ~rvig~gt~LDsaR~~~~lae~~  159 (313)
T COG0039         137 NRVIGSGTVLDSARFRTFLAEKL  159 (313)
T ss_pred             cceecccchHHHHHHHHHHHHHh
Confidence            22 22333333445566666666

>PTZ00117 malate dehydrogenase; Provisional

Probab=96.16  E-value=0.086  Score=45.23  Aligned_cols=114  Identities=11%  Similarity=0.064  Sum_probs=68.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCC-CEEEEeeCChhHHHHHHHHHHhcC----CcEEEEEecCCCHHHHHHHHHHHHHHc
Q 024994            1 MTALVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHEWKNKG----FKVTGSVCDLSSREQREKLIETVTSIF   75 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (259)
                      +++.|+|+ |.+|..++..++..| ..++++|++++.++....++....    ... .+.. .+|.+.    +       
T Consensus         6 ~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~-~i~~-~~d~~~----l-------   71 (319)
T PTZ00117          6 KKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNI-NILG-TNNYED----I-------   71 (319)
T ss_pred             cEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCe-EEEe-CCCHHH----h-------
Confidence            47899997 899999999999999 689999998876543333332211    111 1111 123221    1       


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC-CCCEEEEecCCC
Q 024994           76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVG  139 (259)
Q Consensus        76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~isS~~  139 (259)
                       ..-|+||.++|.....   ..+.   .+.+..|.    .+.+.+.+.+.+. .++.+|+++-..
T Consensus        72 -~~ADiVVitag~~~~~---g~~r---~dll~~n~----~i~~~i~~~i~~~~p~a~vivvsNP~  125 (319)
T PTZ00117         72 -KDSDVVVITAGVQRKE---EMTR---EDLLTING----KIMKSVAESVKKYCPNAFVICVTNPL  125 (319)
T ss_pred             -CCCCEEEECCCCCCCC---CCCH---HHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecChH
Confidence             4689999999974321   2222   33455666    3444555555544 345688887755

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.15  E-value=0.033  Score=48.13  Aligned_cols=74  Identities=15%  Similarity=0.173  Sum_probs=49.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      ++++|+|+ |++|...++.+...|+ +|+++++++++++.+ +++   +....   .|..+. ++.+    +.+.. +.+
T Consensus       171 ~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a-~~l---Ga~~v---i~~~~~-~~~~----~~~~~-g~~  236 (343)
T PRK09880        171 KRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLA-REM---GADKL---VNPQND-DLDH----YKAEK-GYF  236 (343)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHH-HHc---CCcEE---ecCCcc-cHHH----HhccC-CCC
Confidence            47899986 8999999998888998 688999998887543 333   32221   233332 2222    22222 469


Q ss_pred             cEEEEcCCC
Q 024994           80 NILINNAAI   88 (259)
Q Consensus        80 d~vi~~ag~   88 (259)
                      |++|.++|.
T Consensus       237 D~vid~~G~  245 (343)
T PRK09880        237 DVSFEVSGH  245 (343)
T ss_pred             CEEEECCCC
Confidence            999999983

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.15  E-value=0.077  Score=42.30  Aligned_cols=32  Identities=25%  Similarity=0.299  Sum_probs=29.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRN   33 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~   33 (259)
                      ++++|.|+ ||+|..+++.|+..|. +++++|++
T Consensus        22 ~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        22 ATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             CcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            47899998 8999999999999998 79999987

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.13  E-value=0.07  Score=39.92  Aligned_cols=31  Identities=26%  Similarity=0.357  Sum_probs=27.2

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCC
Q 024994            2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRN   33 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~   33 (259)
                      +++|.|+ ||+|.++++.|+..|. ++.++|.+
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d   32 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFD   32 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCC
Confidence            4788887 9999999999999998 68888765

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK08223 hypothetical protein; Validated

Probab=96.11  E-value=0.049  Score=45.70  Aligned_cols=35  Identities=26%  Similarity=0.376  Sum_probs=29.6

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHH
Q 024994            2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIEL   37 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~   37 (259)
                      +|+|.|+ ||+|..+++.|+..|. ++.++|.+.-..
T Consensus        29 ~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~   64 (287)
T PRK08223         29 RVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFEL   64 (287)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcch
Confidence            6889988 8999999999999997 788888765333

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.10  E-value=0.041  Score=49.48  Aligned_cols=74  Identities=20%  Similarity=0.115  Sum_probs=48.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+++|+|.+ ++|.++|+.|+++|+.|.+.+.+....  ...+++.....+.+......+ .    ..        ...|
T Consensus         6 ~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~~~--~~~~l~~~~~gi~~~~g~~~~-~----~~--------~~~d   69 (445)
T PRK04308          6 KKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELKPE--RVAQIGKMFDGLVFYTGRLKD-A----LD--------NGFD   69 (445)
T ss_pred             CEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCch--hHHHHhhccCCcEEEeCCCCH-H----HH--------hCCC
Confidence            689999985 999999999999999999998765431  122233211234443332221 1    11        3689


Q ss_pred             EEEEcCCCCC
Q 024994           81 ILINNAAIAF   90 (259)
Q Consensus        81 ~vi~~ag~~~   90 (259)
                      .||..+|+..
T Consensus        70 ~vv~spgi~~   79 (445)
T PRK04308         70 ILALSPGISE   79 (445)
T ss_pred             EEEECCCCCC
Confidence            9999999864

>PLN00203 glutamyl-tRNA reductase

Probab=96.10  E-value=0.042  Score=50.19  Aligned_cols=73  Identities=14%  Similarity=0.231  Sum_probs=51.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |+++|.|+ |.+|..++++|...|+ +|+++.|+.++.+.+..++.  +..+.     +...++....+        ...
T Consensus       267 kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~--g~~i~-----~~~~~dl~~al--------~~a  330 (519)
T PLN00203        267 ARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFP--DVEII-----YKPLDEMLACA--------AEA  330 (519)
T ss_pred             CEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhC--CCceE-----eecHhhHHHHH--------hcC
Confidence            57999999 9999999999999997 79999999998887766542  11111     11222222222        367


Q ss_pred             cEEEEcCCCC
Q 024994           80 NILINNAAIA   89 (259)
Q Consensus        80 d~vi~~ag~~   89 (259)
                      |+||.+.+..
T Consensus       331 DVVIsAT~s~  340 (519)
T PLN00203        331 DVVFTSTSSE  340 (519)
T ss_pred             CEEEEccCCC
Confidence            9999887643

>PRK06223 malate dehydrogenase; Reviewed

Probab=96.09  E-value=0.18  Score=42.94  Aligned_cols=114  Identities=10%  Similarity=0.062  Sum_probs=66.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcC----CcEEEEEecCCCHHHHHHHHHHHHHHc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKG----FKVTGSVCDLSSREQREKLIETVTSIF   75 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (259)
                      +++.|+|+ |.+|..++..++.+|. .|++++++++.++....++....    .... +.. .+|.+.    +       
T Consensus         3 ~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~-i~~-~~d~~~----~-------   68 (307)
T PRK06223          3 KKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTK-ITG-TNDYED----I-------   68 (307)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcE-EEe-CCCHHH----H-------
Confidence            57899999 9999999999999875 99999998887655444433221    0111 111 122211    1       


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC-CCCEEEEecCCC
Q 024994           76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVG  139 (259)
Q Consensus        76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~isS~~  139 (259)
                       ..-|++|.++|.....   ..+.   .+.+..|+.    +.+.+.+.+.+. .++.+|+++-..
T Consensus        69 -~~aDiVii~~~~p~~~---~~~r---~~~~~~n~~----i~~~i~~~i~~~~~~~~viv~tNP~  122 (307)
T PRK06223         69 -AGSDVVVITAGVPRKP---GMSR---DDLLGINAK----IMKDVAEGIKKYAPDAIVIVVTNPV  122 (307)
T ss_pred             -CCCCEEEECCCCCCCc---CCCH---HHHHHHHHH----HHHHHHHHHHHHCCCeEEEEecCcH
Confidence             4689999999974321   1221   223334443    334444444443 345677776654

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=96.04  E-value=0.24  Score=42.28  Aligned_cols=114  Identities=12%  Similarity=0.135  Sum_probs=71.3

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCC--EEEEeeCChhHHHHHHHHHHhcC-----CcEEEEEecCCCHHHHHHHHHHHHHH
Q 024994            2 TALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKG-----FKVTGSVCDLSSREQREKLIETVTSI   74 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~   74 (259)
                      ++.|.|+ |.+|..+|..|+.++.  .++++|.++++.+....++....     .++....   .+.+.       +   
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~---~~y~~-------~---   66 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRA---GDYDD-------C---   66 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEE---CCHHH-------h---
Confidence            3678898 9999999999999885  69999999887776666666421     1233322   23222       1   


Q ss_pred             cCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCC
Q 024994           75 FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVG  139 (259)
Q Consensus        75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~  139 (259)
                        ..-|++|..||.... |  ..+.+ -.+.++.|..    +++...+.+.+.. ++.++.+|-..
T Consensus        67 --~~aDivvitaG~~~k-p--g~tr~-R~dll~~N~~----I~~~i~~~i~~~~p~~i~ivvsNPv  122 (307)
T cd05290          67 --ADADIIVITAGPSID-P--GNTDD-RLDLAQTNAK----IIREIMGNITKVTKEAVIILITNPL  122 (307)
T ss_pred             --CCCCEEEECCCCCCC-C--CCCch-HHHHHHHHHH----HHHHHHHHHHHhCCCeEEEEecCcH
Confidence              578999999997522 1  12211 1233445544    4455555555543 56666666654

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.00  E-value=0.02  Score=51.37  Aligned_cols=41  Identities=24%  Similarity=0.231  Sum_probs=36.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARL   41 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~   41 (259)
                      |++.|+||+|.+|.++++.|.++|++|++++|+.+...+..
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a   41 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVA   41 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHH
Confidence            57999999999999999999999999999999887654433

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=95.96  E-value=0.068  Score=46.73  Aligned_cols=77  Identities=14%  Similarity=0.150  Sum_probs=50.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS-REQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~   78 (259)
                      +++||+|+ |+||..+++.+...|+ +|+.+++++++++.+ +++   +...   ..|..+ .+++.+.+.++   .++.
T Consensus       187 ~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a-~~~---Ga~~---~i~~~~~~~~~~~~v~~~---~~~g  255 (368)
T TIGR02818       187 DTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA-KKL---GATD---CVNPNDYDKPIQEVIVEI---TDGG  255 (368)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh---CCCe---EEcccccchhHHHHHHHH---hCCC
Confidence            37899985 9999999998888998 799999988877654 333   3221   123332 12222223222   2246


Q ss_pred             ccEEEEcCCC
Q 024994           79 LNILINNAAI   88 (259)
Q Consensus        79 id~vi~~ag~   88 (259)
                      +|++|.++|.
T Consensus       256 ~d~vid~~G~  265 (368)
T TIGR02818       256 VDYSFECIGN  265 (368)
T ss_pred             CCEEEECCCC
Confidence            9999999984

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised

Probab=95.94  E-value=0.021  Score=43.03  Aligned_cols=40  Identities=23%  Similarity=0.230  Sum_probs=32.8

Q ss_pred             EEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHH
Q 024994            3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEW   44 (259)
Q Consensus         3 ~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~   44 (259)
                      |+.+|+++-+|+++|..|+++|.+|+.+  +.+..+.+..++
T Consensus         1 V~L~G~~sKvaraiA~~LC~rgv~V~m~--~~~~y~~lk~~~   40 (164)
T PF12076_consen    1 VFLTGNTSKVARAIALALCRRGVQVVML--SKERYESLKSEA   40 (164)
T ss_pred             CeecccccHHHHHHHHHHHhcCCEEEEe--cHHHHHHHHHHc
Confidence            5789999999999999999999999999  455555554444

This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=95.94  E-value=0.036  Score=48.71  Aligned_cols=37  Identities=14%  Similarity=0.073  Sum_probs=31.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHC-CCEEEEeeCChhHH
Q 024994            1 MTALVTGGTRGIGHATVEELARF-GAIVHTCSRNQIEL   37 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~-G~~V~~~~r~~~~~   37 (259)
                      |++.|.||||.+|.++.+.|.++ ..+|..+.++.+..
T Consensus        39 ~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG   76 (381)
T PLN02968         39 KRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAG   76 (381)
T ss_pred             cEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcC
Confidence            47999999999999999999999 67888888765544

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=95.92  E-value=0.085  Score=46.21  Aligned_cols=32  Identities=25%  Similarity=0.459  Sum_probs=28.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRN   33 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~   33 (259)
                      ++|+|.|+ ||+|.++++.|+..|. +++++|.+
T Consensus        42 ~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         42 ARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             CcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            36888888 8999999999999997 89888876

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=95.91  E-value=0.11  Score=39.61  Aligned_cols=39  Identities=21%  Similarity=0.225  Sum_probs=30.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDAR   40 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~   40 (259)
                      |+++|.|= |-+|+.+|+.|...|++|+++.+++.+.-+.
T Consensus        24 k~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA   62 (162)
T PF00670_consen   24 KRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRALQA   62 (162)
T ss_dssp             SEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHH
T ss_pred             CEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHHHHh
Confidence            67888886 9999999999999999999999988655443

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=95.90  E-value=0.052  Score=39.64  Aligned_cols=67  Identities=22%  Similarity=0.398  Sum_probs=46.5

Q ss_pred             hHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC-CccEEEEcCCC
Q 024994           11 GIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG-KLNILINNAAI   88 (259)
Q Consensus        11 giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~-~id~vi~~ag~   88 (259)
                      |||...++.+...|++|+++++++++.+.+. ++   +...   ..|-.+.+    +.+++.+..++ ++|++|.++|.
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~-~~---Ga~~---~~~~~~~~----~~~~i~~~~~~~~~d~vid~~g~   68 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAK-EL---GADH---VIDYSDDD----FVEQIRELTGGRGVDVVIDCVGS   68 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-HT---TESE---EEETTTSS----HHHHHHHHTTTSSEEEEEESSSS
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHHHHHH-hh---cccc---cccccccc----cccccccccccccceEEEEecCc
Confidence            6899999999999999999999998875543 32   3111   13443333    44555555543 69999999993

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=95.89  E-value=0.037  Score=42.76  Aligned_cols=39  Identities=23%  Similarity=0.252  Sum_probs=32.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDAR   40 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~   40 (259)
                      ++++|||+ |-.|...++.|...|++|+..+.+.+..+..
T Consensus        21 ~~vvv~G~-G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~   59 (168)
T PF01262_consen   21 AKVVVTGA-GRVGQGAAEIAKGLGAEVVVPDERPERLRQL   59 (168)
T ss_dssp             -EEEEEST-SHHHHHHHHHHHHTT-EEEEEESSHHHHHHH
T ss_pred             eEEEEECC-CHHHHHHHHHHhHCCCEEEeccCCHHHHHhh
Confidence            36888885 9999999999999999999999988766553

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=95.89  E-value=0.056  Score=46.50  Aligned_cols=75  Identities=16%  Similarity=0.193  Sum_probs=50.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCE-EEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC-CC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAI-VHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ-GK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~~   78 (259)
                      +++||+|+ |++|..+++.+...|++ |+++++++++.+.+ +++   +...   ..|..+.+ .+++.    +..+ .+
T Consensus       165 ~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~---ga~~---~i~~~~~~-~~~~~----~~~~~~~  231 (339)
T cd08239         165 DTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KAL---GADF---VINSGQDD-VQEIR----ELTSGAG  231 (339)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh---CCCE---EEcCCcch-HHHHH----HHhCCCC
Confidence            47899986 89999999999999998 99999988876543 333   3211   13433333 22222    2221 26


Q ss_pred             ccEEEEcCCC
Q 024994           79 LNILINNAAI   88 (259)
Q Consensus        79 id~vi~~ag~   88 (259)
                      +|++|.+.|.
T Consensus       232 ~d~vid~~g~  241 (339)
T cd08239         232 ADVAIECSGN  241 (339)
T ss_pred             CCEEEECCCC
Confidence            9999999884

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>cd05295 MDH_like Malate dehydrogenase-like

Probab=95.86  E-value=0.11  Score=46.44  Aligned_cols=111  Identities=9%  Similarity=0.089  Sum_probs=67.7

Q ss_pred             EEEEEcCcchHHHHHHHHHHHC---CC----EEEEeeC--ChhHHHHHHHHHHhcC----CcEEEEEecCCCHHHHHHHH
Q 024994            2 TALVTGGTRGIGHATVEELARF---GA----IVHTCSR--NQIELDARLHEWKNKG----FKVTGSVCDLSSREQREKLI   68 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~---G~----~V~~~~r--~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~   68 (259)
                      +|+||||+|-||.++...++.-   |.    .+++++.  +.+.++....++++..    ..+.+. .  .+.+.     
T Consensus       125 ~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~-~--~~~ea-----  196 (452)
T cd05295         125 QVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT-T--DLDVA-----  196 (452)
T ss_pred             EEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE-E--CCHHH-----
Confidence            5899999999999999999972   42    4778888  6777777777766432    112211 1  12221     


Q ss_pred             HHHHHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCC--CEEEEecC
Q 024994           69 ETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGN--GSIVFISS  137 (259)
Q Consensus        69 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~ii~isS  137 (259)
                            + ...|++|..+|.....   ..+   -.+.++.|..-.-...+.    +.+...  .+|+.+.|
T Consensus       197 ------~-~daDvvIitag~prk~---G~~---R~DLL~~N~~Ifk~~g~~----I~~~a~~~~~VlVv~t  250 (452)
T cd05295         197 ------F-KDAHVIVLLDDFLIKE---GED---LEGCIRSRVAICQLYGPL----IEKNAKEDVKVIVAGR  250 (452)
T ss_pred             ------h-CCCCEEEECCCCCCCc---CCC---HHHHHHHHHHHHHHHHHH----HHHhCCCCCeEEEEeC
Confidence                  2 5799999999975221   223   334555665544444444    454433  55666554

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=95.84  E-value=0.056  Score=46.02  Aligned_cols=40  Identities=33%  Similarity=0.359  Sum_probs=35.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDAR   40 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~   40 (259)
                      +++||.|+++++|..+++.+...|++|+.+.+++++.+.+
T Consensus       148 ~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~  187 (326)
T cd08289         148 GPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL  187 (326)
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH
Confidence            3799999999999999999999999999999988876554

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=95.80  E-value=0.031  Score=51.81  Aligned_cols=71  Identities=14%  Similarity=0.082  Sum_probs=54.3

Q ss_pred             EEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCccEE
Q 024994            3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNIL   82 (259)
Q Consensus         3 ~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~v   82 (259)
                      ++|.|. |.+|+++++.|.++|++|+++++|+++.++..+      .....+.+|.+|++..+++--       .+.|.+
T Consensus       420 iiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~------~g~~~i~GD~~~~~~L~~a~i-------~~a~~v  485 (558)
T PRK10669        420 ALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDELRE------RGIRAVLGNAANEEIMQLAHL-------DCARWL  485 (558)
T ss_pred             EEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH------CCCeEEEcCCCCHHHHHhcCc-------cccCEE
Confidence            566666 899999999999999999999999987766542      157788899999877665311       356766


Q ss_pred             EEcCC
Q 024994           83 INNAA   87 (259)
Q Consensus        83 i~~ag   87 (259)
                      +-+.+
T Consensus       486 iv~~~  490 (558)
T PRK10669        486 LLTIP  490 (558)
T ss_pred             EEEcC
Confidence            66554

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=95.78  E-value=0.1  Score=42.65  Aligned_cols=36  Identities=28%  Similarity=0.527  Sum_probs=29.0

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHH
Q 024994            2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELD   38 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~   38 (259)
                      ++||.|+ ||+|.++++.|+..|. ++.++|.+.-...
T Consensus         1 kVlvvG~-GGlG~eilk~La~~Gvg~i~ivD~D~Ve~s   37 (234)
T cd01484           1 KVLLVGA-GGIGCELLKNLALMGFGQIHVIDMDTIDVS   37 (234)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcch
Confidence            3678875 8999999999999997 7888887654433

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=95.77  E-value=0.028  Score=47.06  Aligned_cols=43  Identities=19%  Similarity=0.196  Sum_probs=37.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEW   44 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~   44 (259)
                      |+++|.|+ ||.+++++..|.+.|. +|++++|+.++.+.+.+.+
T Consensus       123 ~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~  166 (272)
T PRK12550        123 LVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY  166 (272)
T ss_pred             CeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence            47899997 9999999999999997 6999999998887776543

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=95.77  E-value=0.062  Score=45.62  Aligned_cols=75  Identities=19%  Similarity=0.295  Sum_probs=51.0

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC-CCcc
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ-GKLN   80 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~~id   80 (259)
                      +++|+|+++++|..+++.+...|++|+.++++.+..+.+ +++   +... +  .|..+.+..+.    +.+..+ .++|
T Consensus       145 ~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~---g~~~-~--~~~~~~~~~~~----~~~~~~~~~~d  213 (324)
T cd08244         145 VVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RAL---GADV-A--VDYTRPDWPDQ----VREALGGGGVT  213 (324)
T ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc---CCCE-E--EecCCccHHHH----HHHHcCCCCce
Confidence            689999999999999999999999999999988876544 332   2211 1  23333322222    222222 2599


Q ss_pred             EEEEcCC
Q 024994           81 ILINNAA   87 (259)
Q Consensus        81 ~vi~~ag   87 (259)
                      .++++.|
T Consensus       214 ~vl~~~g  220 (324)
T cd08244         214 VVLDGVG  220 (324)
T ss_pred             EEEECCC
Confidence            9999987

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=95.76  E-value=0.063  Score=48.34  Aligned_cols=76  Identities=26%  Similarity=0.164  Sum_probs=50.8

Q ss_pred             CEEEEEcC----------------cchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHH
Q 024994            1 MTALVTGG----------------TRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQR   64 (259)
Q Consensus         1 k~~lItG~----------------s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   64 (259)
                      |++|||+|                ||-.|.++|+.+..+|++|+++.-... +        .....+.++  ++.+.+++
T Consensus       257 kkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~--------~~p~~v~~i--~V~ta~eM  325 (475)
T PRK13982        257 RRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-L--------ADPQGVKVI--HVESARQM  325 (475)
T ss_pred             CEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-C--------CCCCCceEE--EecCHHHH
Confidence            57888865                678999999999999999999874321 1        012234443  34444454


Q ss_pred             HHHHHHHHHHcCCCccEEEEcCCCCCCC
Q 024994           65 EKLIETVTSIFQGKLNILINNAAIAFVK   92 (259)
Q Consensus        65 ~~~~~~~~~~~~~~id~vi~~ag~~~~~   92 (259)
                      .   +.+.+.+  +.|++|++|.+....
T Consensus       326 ~---~av~~~~--~~Di~I~aAAVaDyr  348 (475)
T PRK13982        326 L---AAVEAAL--PADIAIFAAAVADWR  348 (475)
T ss_pred             H---HHHHhhC--CCCEEEEecccccee
Confidence            4   4444445  379999999987544

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=95.71  E-value=0.045  Score=44.05  Aligned_cols=194  Identities=14%  Similarity=0.006  Sum_probs=116.0

Q ss_pred             EEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCccEE
Q 024994            3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNIL   82 (259)
Q Consensus         3 ~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~v   82 (259)
                      .|+.|+.+..|.++++.....|..|.++.|+..+  .+   +++....+.|.+.|.-...-.+...        .++..+
T Consensus        55 tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k--~~---l~sw~~~vswh~gnsfssn~~k~~l--------~g~t~v  121 (283)
T KOG4288|consen   55 TLVLGGNPFSGSEVLKNATNVVHSVGILSENENK--QT---LSSWPTYVSWHRGNSFSSNPNKLKL--------SGPTFV  121 (283)
T ss_pred             HhhhcCCCcchHHHHHHHHhhceeeeEeecccCc--ch---hhCCCcccchhhccccccCcchhhh--------cCCccc
Confidence            4678999999999999999999999999998763  22   2233456777777665432221111        246666


Q ss_pred             EEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCc-cCCCCCChhhhhhHHHHHHHH
Q 024994           83 INNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG-VRGIPSVSLYGAYKGAMNQLT  161 (259)
Q Consensus        83 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~-~~~~~~~~~Y~~sK~a~~~~~  161 (259)
                      +-++|...          ....|-.+|=.......+++    .+.+-.++++||.... ..+.... .|=-+|...+.  
T Consensus       122 ~e~~ggfg----------n~~~m~~ing~ani~a~kaa----~~~gv~~fvyISa~d~~~~~~i~r-GY~~gKR~AE~--  184 (283)
T KOG4288|consen  122 YEMMGGFG----------NIILMDRINGTANINAVKAA----AKAGVPRFVYISAHDFGLPPLIPR-GYIEGKREAEA--  184 (283)
T ss_pred             HHHhcCcc----------chHHHHHhccHhhHHHHHHH----HHcCCceEEEEEhhhcCCCCccch-hhhccchHHHH--
Confidence            66666432          23344556666666666766    6677799999998543 3333333 57778877662  


Q ss_pred             HHHHHHHccCCceEEEEeCCceeCCCCCCC---cCCCCc---hHHHHhh---hhcCCC-----CCCCCHHHHHHHHHHHh
Q 024994          162 KNLACEWAKDNIRTNTVAPWVIKTSMIKPF---EEGPEG---SEFLDGI---ARQTPI-----GRAGEPDEVSSLVAFLC  227 (259)
Q Consensus       162 ~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~---~~~~~~---~~~~~~~---~~~~~~-----~~~~~~~~va~~~~~l~  227 (259)
                       .+   +...+.|-..++||+|+....-.-   +-+...   +...+..   ....|+     ....+.++++.+++.-+
T Consensus       185 -El---l~~~~~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aal~ai  260 (283)
T KOG4288|consen  185 -EL---LKKFRFRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAALKAI  260 (283)
T ss_pred             -HH---HHhcCCCceeeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHHHHhc
Confidence             11   233467788899999977632111   000011   1111111   111221     22345799999988877


Q ss_pred             CCC
Q 024994          228 LPA  230 (259)
Q Consensus       228 ~~~  230 (259)
                      +|.
T Consensus       261 ~dp  263 (283)
T KOG4288|consen  261 EDP  263 (283)
T ss_pred             cCC
Confidence            654

>PF13649 Methyltransf_25: Methyltransferase domain; PDB: 3BXO_B 3GGD_A 3PX2_A 3PX3_A 3PFH_D 3PFG_A 1Y8C_A

Probab=95.68  E-value=0.13  Score=35.76  Aligned_cols=83  Identities=16%  Similarity=0.205  Sum_probs=55.6

Q ss_pred             CcchHHHHHHHHHHHCC--CEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCccEEEEc
Q 024994            8 GTRGIGHATVEELARFG--AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINN   85 (259)
Q Consensus         8 ~s~giG~~~a~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~vi~~   85 (259)
                      |+|.....+++.+ +.|  .+++.++.+++.++...+.....+.++.+++.|+.+...          . .+++|+|+..
T Consensus         7 G~G~~~~~l~~~~-~~~~~~~~~gvD~s~~~l~~~~~~~~~~~~~~~~~~~D~~~l~~----------~-~~~~D~v~~~   74 (101)
T PF13649_consen    7 GTGRVTRALARRF-DAGPSSRVIGVDISPEMLELAKKRFSEDGPKVRFVQADARDLPF----------S-DGKFDLVVCS   74 (101)
T ss_dssp             TTSHHHHHHHHHS------SEEEEEES-HHHHHHHHHHSHHTTTTSEEEESCTTCHHH----------H-SSSEEEEEE-
T ss_pred             CCcHHHHHHHHHh-hhcccceEEEEECCHHHHHHHHHhchhcCCceEEEECCHhHCcc----------c-CCCeeEEEEc
Confidence            5566667777777 667  799999999999988877776666689999999988421          1 2589999996


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHH
Q 024994           86 AAIAFVKPTVDITAEDMSTVSS  107 (259)
Q Consensus        86 ag~~~~~~~~~~~~~~~~~~~~  107 (259)
                      .....     -++.+++++.++
T Consensus        75 ~~~~~-----~~~~~~~~~ll~   91 (101)
T PF13649_consen   75 GLSLH-----HLSPEELEALLR   91 (101)
T ss_dssp             TTGGG-----GSSHHHHHHHHH
T ss_pred             CCccC-----CCCHHHHHHHHH
Confidence            55221     145666665443

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=95.68  E-value=0.096  Score=45.75  Aligned_cols=77  Identities=13%  Similarity=0.154  Sum_probs=51.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCH-HHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR-EQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~~   78 (259)
                      .++||.|+ |++|..+++.+...|+ +|+.+++++++.+.+ +++   +... +  .|..+. ++..+.+.+.   .++.
T Consensus       188 ~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~l---Ga~~-~--i~~~~~~~~~~~~v~~~---~~~g  256 (368)
T cd08300         188 STVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKF---GATD-C--VNPKDHDKPIQQVLVEM---TDGG  256 (368)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHc---CCCE-E--EcccccchHHHHHHHHH---hCCC
Confidence            37899975 8999999999999999 799999999887644 333   3221 1  233332 2333333333   2246


Q ss_pred             ccEEEEcCCC
Q 024994           79 LNILINNAAI   88 (259)
Q Consensus        79 id~vi~~ag~   88 (259)
                      +|++|.+.|.
T Consensus       257 ~d~vid~~g~  266 (368)
T cd08300         257 VDYTFECIGN  266 (368)
T ss_pred             CcEEEECCCC
Confidence            9999999883

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=95.64  E-value=0.099  Score=44.57  Aligned_cols=32  Identities=28%  Similarity=0.432  Sum_probs=27.7

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCCh
Q 024994            2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQ   34 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~   34 (259)
                      +|||.|+ ||+|.++++.|+..|. ++.++|.+.
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~   33 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDT   33 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCC
Confidence            4788887 9999999999999997 788888654

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.61  E-value=0.084  Score=47.93  Aligned_cols=74  Identities=15%  Similarity=0.119  Sum_probs=49.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChh-HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI-ELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |+++|.|+ |++|.++|+.|.++|+.|++++++.. ......+.+++.+..+  ...+-..             .. ...
T Consensus        17 ~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~--~~~~~~~-------------~~-~~~   79 (480)
T PRK01438         17 LRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATV--RLGPGPT-------------LP-EDT   79 (480)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEE--EECCCcc-------------cc-CCC
Confidence            57899997 88999999999999999999986553 3333344455444333  2222111             01 368


Q ss_pred             cEEEEcCCCCCC
Q 024994           80 NILINNAAIAFV   91 (259)
Q Consensus        80 d~vi~~ag~~~~   91 (259)
                      |.||...|+.+.
T Consensus        80 D~Vv~s~Gi~~~   91 (480)
T PRK01438         80 DLVVTSPGWRPD   91 (480)
T ss_pred             CEEEECCCcCCC
Confidence            999999998643

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=95.58  E-value=0.066  Score=38.89  Aligned_cols=36  Identities=19%  Similarity=0.154  Sum_probs=27.9

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCC-E-EEEeeCChhHH
Q 024994            2 TALVTGGTRGIGHATVEELARFGA-I-VHTCSRNQIEL   37 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~-~-V~~~~r~~~~~   37 (259)
                      ++.|+|++|-+|.++++.|.++-. . +.+++++.+..
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g   38 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAG   38 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTT
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccC
Confidence            588999999999999999999743 4 55566666333

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=95.55  E-value=0.15  Score=40.86  Aligned_cols=53  Identities=21%  Similarity=0.226  Sum_probs=38.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChh-HHHHHHHHHHhcCCcEEEEEecCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI-ELDARLHEWKNKGFKVTGSVCDLS   59 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~D~~   59 (259)
                      |++||.|| |.+|..-++.|++.|++|++++.+.. .++.+    ...+ ++.++..+..
T Consensus        10 k~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l----~~~~-~i~~~~~~~~   63 (205)
T TIGR01470        10 RAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELESELTLL----AEQG-GITWLARCFD   63 (205)
T ss_pred             CeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHH----HHcC-CEEEEeCCCC
Confidence            67999998 89999999999999999999987654 22222    2222 5666666654

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PLN02740 Alcohol dehydrogenase-like

Probab=95.55  E-value=0.1  Score=45.87  Aligned_cols=77  Identities=16%  Similarity=0.129  Sum_probs=50.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCH-HHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR-EQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~~   78 (259)
                      +++||.|+ |+||..+++.+...|+ +|+.+++++++++.+ +++   +... +  .|..+. +...+.+.+.   .++.
T Consensus       200 ~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a-~~~---Ga~~-~--i~~~~~~~~~~~~v~~~---~~~g  268 (381)
T PLN02740        200 SSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKG-KEM---GITD-F--INPKDSDKPVHERIREM---TGGG  268 (381)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHH-HHc---CCcE-E--EecccccchHHHHHHHH---hCCC
Confidence            37899986 9999999999999998 699999988877654 332   3221 2  233322 1222223222   2236


Q ss_pred             ccEEEEcCCC
Q 024994           79 LNILINNAAI   88 (259)
Q Consensus        79 id~vi~~ag~   88 (259)
                      +|++|.++|.
T Consensus       269 ~dvvid~~G~  278 (381)
T PLN02740        269 VDYSFECAGN  278 (381)
T ss_pred             CCEEEECCCC
Confidence            9999999994

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=95.52  E-value=0.23  Score=39.52  Aligned_cols=32  Identities=16%  Similarity=0.305  Sum_probs=26.9

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCCh
Q 024994            2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQ   34 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~   34 (259)
                      +|+|.|+ ||+|.++++.|+..|. +++++|.+.
T Consensus        21 ~VlviG~-gglGsevak~L~~~GVg~i~lvD~d~   53 (198)
T cd01485          21 KVLIIGA-GALGAEIAKNLVLAGIDSITIVDHRL   53 (198)
T ss_pred             cEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCc
Confidence            6888887 5699999999999997 588887653

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=95.50  E-value=0.045  Score=46.70  Aligned_cols=40  Identities=23%  Similarity=0.148  Sum_probs=35.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARL   41 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~   41 (259)
                      |++.|+| .|-+|.+++..|+++|++|++.+|+++..+...
T Consensus         3 ~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~   42 (308)
T PRK06129          3 GSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAAAAAAP   42 (308)
T ss_pred             cEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHHH
Confidence            4788999 588999999999999999999999988766543

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=95.44  E-value=0.11  Score=46.12  Aligned_cols=85  Identities=7%  Similarity=0.060  Sum_probs=50.2

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCC---EEEEeeCChhHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024994            2 TALVTGGTRGIGHATVEELARFGA---IVHTCSRNQIELDARLHEWKNKG--FKVTGSVCDLSSREQREKLIETVTSIFQ   76 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (259)
                      +++|.|++|++|..+++.+...|.   +|+++++++++++.+.+......  ........|..+.++..+.+.+...  +
T Consensus       178 ~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~--g  255 (410)
T cd08238         178 NTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYVNPATIDDLHATLMELTG--G  255 (410)
T ss_pred             EEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEECCCccccHHHHHHHHhC--C
Confidence            689999999999998887776654   79999999988765443211000  0111112333322233333332211  1


Q ss_pred             CCccEEEEcCCC
Q 024994           77 GKLNILINNAAI   88 (259)
Q Consensus        77 ~~id~vi~~ag~   88 (259)
                      ..+|.+|.+.|.
T Consensus       256 ~g~D~vid~~g~  267 (410)
T cd08238         256 QGFDDVFVFVPV  267 (410)
T ss_pred             CCCCEEEEcCCC
Confidence            259999998873

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=95.42  E-value=0.33  Score=42.21  Aligned_cols=75  Identities=20%  Similarity=0.260  Sum_probs=48.9

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC-Cc
Q 024994            2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG-KL   79 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~-~i   79 (259)
                      +++|+|+ |-||.-.+..+...|+ +|+++++++++++.+.+..   +....   .+....    .....+.+...+ .+
T Consensus       171 ~V~V~Ga-GpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~---g~~~~---~~~~~~----~~~~~~~~~t~g~g~  239 (350)
T COG1063         171 TVVVVGA-GPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAG---GADVV---VNPSED----DAGAEILELTGGRGA  239 (350)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhC---CCeEe---ecCccc----cHHHHHHHHhCCCCC
Confidence            6888888 9999999888888896 6888899999987664422   11111   111111    222233333323 59


Q ss_pred             cEEEEcCC
Q 024994           80 NILINNAA   87 (259)
Q Consensus        80 d~vi~~ag   87 (259)
                      |++|-++|
T Consensus       240 D~vie~~G  247 (350)
T COG1063         240 DVVIEAVG  247 (350)
T ss_pred             CEEEECCC
Confidence            99999999

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=95.40  E-value=0.13  Score=43.37  Aligned_cols=74  Identities=23%  Similarity=0.315  Sum_probs=49.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      .++||.|+++++|.++++.+...|++|+.+.++.++.+.+ .++   +..  .+..+  .. +..   +++.+. +.++|
T Consensus       144 ~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~--~~~~~--~~-~~~---~~i~~~-~~~~d  210 (320)
T cd08243         144 DTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL-KEL---GAD--EVVID--DG-AIA---EQLRAA-PGGFD  210 (320)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-Hhc---CCc--EEEec--Cc-cHH---HHHHHh-CCCce
Confidence            3789999999999999999999999999999888765444 322   321  11112  11 211   222222 35799


Q ss_pred             EEEEcCC
Q 024994           81 ILINNAA   87 (259)
Q Consensus        81 ~vi~~ag   87 (259)
                      .++++.|
T Consensus       211 ~vl~~~~  217 (320)
T cd08243         211 KVLELVG  217 (320)
T ss_pred             EEEECCC
Confidence            9999887

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=95.39  E-value=0.13  Score=43.99  Aligned_cols=74  Identities=15%  Similarity=0.132  Sum_probs=47.1

Q ss_pred             EEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC-CCccE
Q 024994            3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ-GKLNI   81 (259)
Q Consensus         3 ~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~~id~   81 (259)
                      ++++||+|++|..+++.....|++|+.+.+++++.+.+. ++   +... ++  |..+.+..    +++.+..+ ..+|+
T Consensus       147 lv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~-~~---g~~~-~i--~~~~~~~~----~~v~~~~~~~~~d~  215 (324)
T cd08291         147 VVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLK-KI---GAEY-VL--NSSDPDFL----EDLKELIAKLNATI  215 (324)
T ss_pred             EEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-Hc---CCcE-EE--ECCCccHH----HHHHHHhCCCCCcE
Confidence            444599999999999888888999999999887765543 22   3221 22  22222222    22222222 35999


Q ss_pred             EEEcCC
Q 024994           82 LINNAA   87 (259)
Q Consensus        82 vi~~ag   87 (259)
                      +|.+.|
T Consensus       216 vid~~g  221 (324)
T cd08291         216 FFDAVG  221 (324)
T ss_pred             EEECCC
Confidence            999888

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=95.39  E-value=0.18  Score=40.06  Aligned_cols=32  Identities=19%  Similarity=0.295  Sum_probs=26.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRN   33 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~   33 (259)
                      ++|+|.|+ ||+|.++++.|+..|. ++.++|.+
T Consensus        22 s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d   54 (197)
T cd01492          22 ARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDR   54 (197)
T ss_pred             CcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECC
Confidence            46888886 6699999999999997 68888754

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=95.38  E-value=0.11  Score=44.22  Aligned_cols=76  Identities=13%  Similarity=0.200  Sum_probs=49.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      ++++|.|+++.+|.++++.....|.+|+.+.++.++.+.+ +++   +.. .+  .+..+. +..+.+...   .++.+|
T Consensus       141 ~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~-~v--~~~~~~-~~~~~~~~~---~~~~vd  209 (329)
T cd08250         141 ETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL-KSL---GCD-RP--INYKTE-DLGEVLKKE---YPKGVD  209 (329)
T ss_pred             CEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH-HHc---CCc-eE--EeCCCc-cHHHHHHHh---cCCCCe
Confidence            3689999999999999999999999999999887766544 332   221 11  222222 222222222   224699


Q ss_pred             EEEEcCC
Q 024994           81 ILINNAA   87 (259)
Q Consensus        81 ~vi~~ag   87 (259)
                      .++++.|
T Consensus       210 ~v~~~~g  216 (329)
T cd08250         210 VVYESVG  216 (329)
T ss_pred             EEEECCc
Confidence            9999877

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=95.38  E-value=0.097  Score=44.46  Aligned_cols=76  Identities=9%  Similarity=0.047  Sum_probs=50.5

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC-CCcc
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ-GKLN   80 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~~id   80 (259)
                      ++||.|+++++|.++++.....|++|+.+.++.++.+.+.+ +   +.. .++  +..+. +..   +++.+..+ .++|
T Consensus       142 ~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~---g~~-~~~--~~~~~-~~~---~~i~~~~~~~~~d  210 (324)
T cd08292         142 WLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA-L---GIG-PVV--STEQP-GWQ---DKVREAAGGAPIS  210 (324)
T ss_pred             EEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh-c---CCC-EEE--cCCCc-hHH---HHHHHHhCCCCCc
Confidence            68999999999999999999999999999888877655432 2   221 111  22222 222   22222222 2599


Q ss_pred             EEEEcCCC
Q 024994           81 ILINNAAI   88 (259)
Q Consensus        81 ~vi~~ag~   88 (259)
                      +++.+.|.
T Consensus       211 ~v~d~~g~  218 (324)
T cd08292         211 VALDSVGG  218 (324)
T ss_pred             EEEECCCC
Confidence            99998883

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=95.36  E-value=0.1  Score=43.90  Aligned_cols=40  Identities=30%  Similarity=0.382  Sum_probs=34.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDAR   40 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~   40 (259)
                      ++++|+|+++++|..++..+...|+.|+.++++.++.+.+
T Consensus       141 ~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  180 (323)
T cd08241         141 ETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALA  180 (323)
T ss_pred             CEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHH
Confidence            3789999999999999999999999999999887765543

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=95.33  E-value=0.15  Score=44.13  Aligned_cols=39  Identities=23%  Similarity=0.309  Sum_probs=34.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDAR   40 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~   40 (259)
                      ++++|.|+ |++|..+++.+...|.+|+++++++++++.+
T Consensus       168 ~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~  206 (349)
T TIGR03201       168 DLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM  206 (349)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            47999999 9999999999999999999999998887644

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=95.32  E-value=0.11  Score=44.62  Aligned_cols=35  Identities=14%  Similarity=0.227  Sum_probs=31.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChh
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI   35 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~   35 (259)
                      +++||.|+++++|.++++.+...|++|+.+.++.+
T Consensus       148 ~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~  182 (341)
T cd08290         148 DWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRP  182 (341)
T ss_pred             CEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCC
Confidence            47899999999999999999999999988887653

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=95.28  E-value=0.15  Score=44.43  Aligned_cols=77  Identities=14%  Similarity=0.163  Sum_probs=50.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCH-HHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR-EQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~~   78 (259)
                      .++||.|+ |++|..+++.+...|+ +|+.+++++++.+.+ +++   +... +  .|..+. ++..+.+.++   .++.
T Consensus       189 ~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~~~---Ga~~-~--i~~~~~~~~~~~~v~~~---~~~~  257 (369)
T cd08301         189 STVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KKF---GVTE-F--VNPKDHDKPVQEVIAEM---TGGG  257 (369)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc---CCce-E--EcccccchhHHHHHHHH---hCCC
Confidence            37899985 8999999998888998 799999998876544 333   3221 1  232221 2333333333   2246


Q ss_pred             ccEEEEcCCC
Q 024994           79 LNILINNAAI   88 (259)
Q Consensus        79 id~vi~~ag~   88 (259)
                      +|+++.+.|.
T Consensus       258 ~d~vid~~G~  267 (369)
T cd08301         258 VDYSFECTGN  267 (369)
T ss_pred             CCEEEECCCC
Confidence            9999999873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=95.26  E-value=0.12  Score=45.24  Aligned_cols=76  Identities=20%  Similarity=0.236  Sum_probs=50.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      +++||+|+ |++|..+++.+...|+ +|+.+++++++++.+ +++   +...   ..|..+.+    ..+++.+..++.+
T Consensus       193 ~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a-~~~---Ga~~---~i~~~~~~----~~~~i~~~~~~g~  260 (371)
T cd08281         193 QSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALA-REL---GATA---TVNAGDPN----AVEQVRELTGGGV  260 (371)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HHc---CCce---EeCCCchh----HHHHHHHHhCCCC
Confidence            47899985 8999999998888999 699999988887544 333   3211   13333322    2223333232469


Q ss_pred             cEEEEcCCC
Q 024994           80 NILINNAAI   88 (259)
Q Consensus        80 d~vi~~ag~   88 (259)
                      |++|.+.|.
T Consensus       261 d~vid~~G~  269 (371)
T cd08281         261 DYAFEMAGS  269 (371)
T ss_pred             CEEEECCCC
Confidence            999999884

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=95.25  E-value=0.21  Score=44.11  Aligned_cols=33  Identities=27%  Similarity=0.346  Sum_probs=28.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCCh
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQ   34 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~   34 (259)
                      ++|+|.|+ ||+|.++++.|+..|. ++.++|.+.
T Consensus        43 ~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D~   76 (392)
T PRK07878         43 ARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFDV   76 (392)
T ss_pred             CCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCE
Confidence            36889988 8999999999999997 688887643

>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]

Probab=95.25  E-value=0.17  Score=33.68  Aligned_cols=35  Identities=34%  Similarity=0.390  Sum_probs=30.0

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHH
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIEL   37 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~   37 (259)
                      +++|.|| |.+|.++|..|.+.|.+|+++.|++..+
T Consensus         1 ~vvViGg-G~ig~E~A~~l~~~g~~vtli~~~~~~~   35 (80)
T PF00070_consen    1 RVVVIGG-GFIGIELAEALAELGKEVTLIERSDRLL   35 (80)
T ss_dssp             EEEEESS-SHHHHHHHHHHHHTTSEEEEEESSSSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHhCcEEEEEeccchhh
Confidence            4677777 9999999999999999999999876543

Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=95.24  E-value=0.091  Score=36.21  Aligned_cols=41  Identities=22%  Similarity=0.215  Sum_probs=34.3

Q ss_pred             EEEEcCcchHHHHHHHHHHHCC---CEEEEe-eCChhHHHHHHHHH
Q 024994            3 ALVTGGTRGIGHATVEELARFG---AIVHTC-SRNQIELDARLHEW   44 (259)
Q Consensus         3 ~lItG~s~giG~~~a~~l~~~G---~~V~~~-~r~~~~~~~~~~~~   44 (259)
                      +.|. |+|.+|.++++.|.+.|   .+|.++ +|++++.+++.++.
T Consensus         2 I~iI-G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~   46 (96)
T PF03807_consen    2 IGII-GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEY   46 (96)
T ss_dssp             EEEE-STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHC
T ss_pred             EEEE-CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhh
Confidence            4555 56999999999999999   899855 99999988877654

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.22  E-value=0.063  Score=45.31  Aligned_cols=41  Identities=17%  Similarity=0.147  Sum_probs=36.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLH   42 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~   42 (259)
                      |++.|.|+ |-+|..+|..|+++|++|++.+++++.++...+
T Consensus         2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~   42 (288)
T PRK09260          2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQ   42 (288)
T ss_pred             cEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHH
Confidence            57889998 999999999999999999999999988877554

>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=95.22  E-value=0.069  Score=45.12  Aligned_cols=42  Identities=19%  Similarity=0.155  Sum_probs=36.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE   43 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~   43 (259)
                      |++.|.|+ |-+|..++..|+++|++|++++++++.++...+.
T Consensus         4 ~~I~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~   45 (291)
T PRK06035          4 KVIGVVGS-GVMGQGIAQVFARTGYDVTIVDVSEEILKNAMEL   45 (291)
T ss_pred             cEEEEECc-cHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHH
Confidence            47888887 8899999999999999999999999988765443

>cd08230 glucose_DH Glucose dehydrogenase

Probab=95.18  E-value=0.11  Score=44.98  Aligned_cols=72  Identities=22%  Similarity=0.273  Sum_probs=46.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCC---hhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRN---QIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG   77 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (259)
                      ++++|+|+ |++|...++.+...|++|++++|+   +++.+ .++++   +..  .  .|..+. +..+ .    +.. +
T Consensus       174 ~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~-~~~~~---Ga~--~--v~~~~~-~~~~-~----~~~-~  237 (355)
T cd08230         174 RRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKAD-IVEEL---GAT--Y--VNSSKT-PVAE-V----KLV-G  237 (355)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHHc---CCE--E--ecCCcc-chhh-h----hhc-C
Confidence            37899986 999999999888899999999984   44443 33332   322  2  233322 2221 1    112 4


Q ss_pred             CccEEEEcCCC
Q 024994           78 KLNILINNAAI   88 (259)
Q Consensus        78 ~id~vi~~ag~   88 (259)
                      .+|++|.+.|.
T Consensus       238 ~~d~vid~~g~  248 (355)
T cd08230         238 EFDLIIEATGV  248 (355)
T ss_pred             CCCEEEECcCC
Confidence            69999999983

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=95.17  E-value=0.19  Score=40.16  Aligned_cols=33  Identities=18%  Similarity=0.317  Sum_probs=30.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCCh
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ   34 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~   34 (259)
                      |++||.|| |.+|...++.|.+.|++|++++++.
T Consensus        11 k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718         11 KRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            68999999 9999999999999999999998754

>cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively

Probab=95.16  E-value=0.13  Score=43.44  Aligned_cols=38  Identities=13%  Similarity=0.305  Sum_probs=30.2

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHH
Q 024994            2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDAR   40 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~   40 (259)
                      +|||.|+ ||+|.++++.|+..|. +++++|.+.-...++
T Consensus         1 kVLIvGa-GGLGs~vA~~La~aGVg~ItlvD~D~Ve~sNL   39 (307)
T cd01486           1 KCLLLGA-GTLGCNVARNLLGWGVRHITFVDSGKVSYSNP   39 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEeccccC
Confidence            4788887 8999999999999997 788888765444433

This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole.

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=95.16  E-value=0.37  Score=38.82  Aligned_cols=56  Identities=14%  Similarity=0.036  Sum_probs=41.2

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHh-------------cCCcEEEEEecCCC
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKN-------------KGFKVTGSVCDLSS   60 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-------------~~~~~~~~~~D~~~   60 (259)
                      +||+.|++.|   .=+..|+++|++|+.++.++..++.+.++...             .+.++.++.+|+.+
T Consensus        37 rvLd~GCG~G---~da~~LA~~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  105 (213)
T TIGR03840        37 RVFVPLCGKS---LDLAWLAEQGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFA  105 (213)
T ss_pred             eEEEeCCCch---hHHHHHHhCCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCC
Confidence            7899998766   45778899999999999999988865432110             13457778888854

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.15  E-value=0.077  Score=44.80  Aligned_cols=43  Identities=21%  Similarity=0.114  Sum_probs=36.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEW   44 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~   44 (259)
                      ++|-|.|+ |-+|..+|..|+..|+.|++.+++++.++...+.+
T Consensus         6 ~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~i   48 (286)
T PRK07819          6 QRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELATAGRNRI   48 (286)
T ss_pred             cEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHH
Confidence            36778887 89999999999999999999999999887655443

>PRK07411 hypothetical protein; Validated

Probab=95.14  E-value=0.23  Score=43.84  Aligned_cols=31  Identities=23%  Similarity=0.304  Sum_probs=27.2

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCC
Q 024994            2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRN   33 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~   33 (259)
                      +|+|.|+ ||+|.++++.|+..|. +++++|.+
T Consensus        40 ~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D   71 (390)
T PRK07411         40 SVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFD   71 (390)
T ss_pred             cEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            6889988 8999999999999997 78887764

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=95.14  E-value=0.053  Score=46.83  Aligned_cols=36  Identities=14%  Similarity=0.169  Sum_probs=28.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCE---EEEeeCChhH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAI---VHTCSRNQIE   36 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~---V~~~~r~~~~   36 (259)
                      ++++|.|+||.+|.++++.|.++|+.   +..+.++.+.
T Consensus         2 ~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~   40 (334)
T PRK14874          2 YNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSA   40 (334)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccC
Confidence            57999999999999999999998774   4556555433

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=95.13  E-value=0.54  Score=40.09  Aligned_cols=118  Identities=14%  Similarity=0.019  Sum_probs=70.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCC--cE-EEEEecCCCHHHHHHHHHHHHHHcC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGF--KV-TGSVCDLSSREQREKLIETVTSIFQ   76 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~--~~-~~~~~D~~~~~~~~~~~~~~~~~~~   76 (259)
                      |++.|.|+ |.+|..+|..|+.+|. +|++++++++..+....++.....  .. ..+.. .+|.+.    +        
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~-t~d~~~----~--------   67 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTG-TNNYAD----T--------   67 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEe-cCCHHH----h--------
Confidence            46889997 8999999999999886 899999976644322222222110  00 01111 122211    1        


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCcc
Q 024994           77 GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV  141 (259)
Q Consensus        77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~  141 (259)
                      ..-|++|.++|.... +  +.+.   .+.+..|..-...+.+.+.++.   .++.+|+++.....
T Consensus        68 ~~aDiVIitag~p~~-~--~~sR---~~l~~~N~~iv~~i~~~I~~~~---p~~~iIv~tNP~di  123 (305)
T TIGR01763        68 ANSDIVVITAGLPRK-P--GMSR---EDLLSMNAGIVREVTGRIMEHS---PNPIIVVVSNPLDA  123 (305)
T ss_pred             CCCCEEEEcCCCCCC-c--CCCH---HHHHHHHHHHHHHHHHHHHHHC---CCeEEEEecCcHHH
Confidence            468999999997532 1  2222   2355567666666666664442   35788888876543

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=95.12  E-value=0.27  Score=41.73  Aligned_cols=86  Identities=19%  Similarity=0.127  Sum_probs=53.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHH----------HHhcCCcEEEEEecCCCHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE----------WKNKGFKVTGSVCDLSSREQREKLIET   70 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~----------~~~~~~~~~~~~~D~~~~~~~~~~~~~   70 (259)
                      +++.|.|. |-+|..+++.|++.|++|++.+|++++.+.+.+.          +-+.-.+...+..-+.+.+.++.+++.
T Consensus         1 m~Ig~IGl-G~MG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~~~~~~e~~~~~~~~dvvi~~v~~~~~~~~v~~~   79 (301)
T PRK09599          1 MQLGMIGL-GRMGGNMARRLLRGGHEVVGYDRNPEAVEALAEEGATGADSLEELVAKLPAPRVVWLMVPAGEITDATIDE   79 (301)
T ss_pred             CEEEEEcc-cHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCeecCCHHHHHhhcCCCCEEEEEecCCcHHHHHHHH
Confidence            46777775 8999999999999999999999998877654321          111000012222334444456666666


Q ss_pred             HHHHcCCCccEEEEcCCC
Q 024994           71 VTSIFQGKLNILINNAAI   88 (259)
Q Consensus        71 ~~~~~~~~id~vi~~ag~   88 (259)
                      +.... .+=+++|++...
T Consensus        80 l~~~l-~~g~ivid~st~   96 (301)
T PRK09599         80 LAPLL-SPGDIVIDGGNS   96 (301)
T ss_pred             HHhhC-CCCCEEEeCCCC
Confidence            65554 233667766554

>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.12  E-value=0.079  Score=44.80  Aligned_cols=41  Identities=22%  Similarity=0.113  Sum_probs=35.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLH   42 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~   42 (259)
                      |++.|.|+ |.+|..+|..|+.+|++|++.+++++.++...+
T Consensus         5 ~kI~vIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~   45 (292)
T PRK07530          5 KKVGVIGA-GQMGNGIAHVCALAGYDVLLNDVSADRLEAGLA   45 (292)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Confidence            46788887 999999999999999999999999988766543

>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.11  E-value=0.15  Score=46.30  Aligned_cols=71  Identities=15%  Similarity=0.197  Sum_probs=46.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+++|.|. |+.|.++++.|.++|+.|.+.+++.....+.   +...+  +.+...+- +.+.    +        ...|
T Consensus        16 ~~v~v~G~-G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~---l~~~g--i~~~~~~~-~~~~----~--------~~~d   76 (473)
T PRK00141         16 GRVLVAGA-GVSGRGIAAMLSELGCDVVVADDNETARHKL---IEVTG--VADISTAE-ASDQ----L--------DSFS   76 (473)
T ss_pred             CeEEEEcc-CHHHHHHHHHHHHCCCEEEEECCChHHHHHH---HHhcC--cEEEeCCC-chhH----h--------cCCC
Confidence            56889985 8999999999999999999999876543222   12212  22222111 1111    1        3579


Q ss_pred             EEEEcCCCCC
Q 024994           81 ILINNAAIAF   90 (259)
Q Consensus        81 ~vi~~ag~~~   90 (259)
                      .||...|+..
T Consensus        77 ~vV~Spgi~~   86 (473)
T PRK00141         77 LVVTSPGWRP   86 (473)
T ss_pred             EEEeCCCCCC
Confidence            9999999863

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=95.06  E-value=0.17  Score=42.49  Aligned_cols=76  Identities=16%  Similarity=0.163  Sum_probs=49.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC-CCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ-GKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~~i   79 (259)
                      ++++|.|+++++|.++++.+...|++|+.+.++.++.+.+ .++   +... ++  +..+....+    .+.+... ..+
T Consensus       138 ~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~-~~--~~~~~~~~~----~~~~~~~~~~~  206 (320)
T cd05286         138 DTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA-RAA---GADH-VI--NYRDEDFVE----RVREITGGRGV  206 (320)
T ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHC---CCCE-EE--eCCchhHHH----HHHHHcCCCCe
Confidence            3689999999999999999999999999999888776544 322   2211 11  222222222    2222221 359


Q ss_pred             cEEEEcCC
Q 024994           80 NILINNAA   87 (259)
Q Consensus        80 d~vi~~ag   87 (259)
                      |.++++.+
T Consensus       207 d~vl~~~~  214 (320)
T cd05286         207 DVVYDGVG  214 (320)
T ss_pred             eEEEECCC
Confidence            99999877

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=95.03  E-value=0.14  Score=44.57  Aligned_cols=76  Identities=18%  Similarity=0.265  Sum_probs=49.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCE-EEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC-CC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAI-VHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ-GK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~~   78 (259)
                      +++||.|+ |++|..+++.+...|+. |+.+++++++.+.+ +++   +.. .  ..|..+.+..+    ++.+..+ ..
T Consensus       178 ~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~-~~~---Ga~-~--~i~~~~~~~~~----~i~~~~~~~g  245 (358)
T TIGR03451       178 DSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWA-REF---GAT-H--TVNSSGTDPVE----AIRALTGGFG  245 (358)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc---CCc-e--EEcCCCcCHHH----HHHHHhCCCC
Confidence            47899985 99999999988889985 99999988876554 332   321 1  12333322222    2222222 25


Q ss_pred             ccEEEEcCCC
Q 024994           79 LNILINNAAI   88 (259)
Q Consensus        79 id~vi~~ag~   88 (259)
                      +|++|.+.|.
T Consensus       246 ~d~vid~~g~  255 (358)
T TIGR03451       246 ADVVIDAVGR  255 (358)
T ss_pred             CCEEEECCCC
Confidence            9999999883

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>PRK14851 hypothetical protein; Provisional

Probab=95.03  E-value=0.27  Score=46.53  Aligned_cols=33  Identities=21%  Similarity=0.348  Sum_probs=27.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCCh
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQ   34 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~   34 (259)
                      ++|+|.|+ ||+|..++..|+..|. +++++|.+.
T Consensus        44 ~~VlIvG~-GGlGs~va~~Lar~GVG~l~LvD~D~   77 (679)
T PRK14851         44 AKVAIPGM-GGVGGVHLITMVRTGIGRFHIADFDQ   77 (679)
T ss_pred             CeEEEECc-CHHHHHHHHHHHHhCCCeEEEEcCCE
Confidence            47889986 8999999999999997 688877543

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.00  E-value=0.072  Score=44.74  Aligned_cols=34  Identities=21%  Similarity=0.208  Sum_probs=31.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCCh
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ   34 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~   34 (259)
                      |+++|+|.|.-+|+.++..|.++|++|+++.++.
T Consensus       159 k~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t  192 (286)
T PRK14175        159 KNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS  192 (286)
T ss_pred             CEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc
Confidence            6899999999999999999999999999998765

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=95.00  E-value=0.18  Score=42.78  Aligned_cols=75  Identities=11%  Similarity=0.150  Sum_probs=50.2

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC-CCcc
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ-GKLN   80 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~~id   80 (259)
                      ++||.|+++++|.++++.+...|+.|+.+.++.++.+.+ +++   +...   ..+..+.+..    +++.+..+ ..+|
T Consensus       141 ~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~---~~~~~~~~~~----~~~~~~~~~~~~d  209 (323)
T cd05282         141 WVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL-KAL---GADE---VIDSSPEDLA----QRVKEATGGAGAR  209 (323)
T ss_pred             EEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH-Hhc---CCCE---EecccchhHH----HHHHHHhcCCCce
Confidence            689999999999999999999999999999888765544 332   2211   1222222222    22222222 3699


Q ss_pred             EEEEcCC
Q 024994           81 ILINNAA   87 (259)
Q Consensus        81 ~vi~~ag   87 (259)
                      .++.+.|
T Consensus       210 ~vl~~~g  216 (323)
T cd05282         210 LALDAVG  216 (323)
T ss_pred             EEEECCC
Confidence            9999887

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>PLN02827 Alcohol dehydrogenase-like

Probab=94.99  E-value=0.22  Score=43.70  Aligned_cols=77  Identities=12%  Similarity=0.107  Sum_probs=49.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCH-HHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR-EQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~~   78 (259)
                      +++||+|+ |++|..+++.+...|+ .|+.+++++++.+.+ +++   +... +  .|..+. ++..+.+++.   .++.
T Consensus       195 ~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a-~~l---Ga~~-~--i~~~~~~~~~~~~v~~~---~~~g  263 (378)
T PLN02827        195 SSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEKA-KTF---GVTD-F--INPNDLSEPIQQVIKRM---TGGG  263 (378)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHc---CCcE-E--EcccccchHHHHHHHHH---hCCC
Confidence            47899985 9999999998888998 477888888776543 332   3211 1  233321 2333333332   2246


Q ss_pred             ccEEEEcCCC
Q 024994           79 LNILINNAAI   88 (259)
Q Consensus        79 id~vi~~ag~   88 (259)
                      +|++|.+.|.
T Consensus       264 ~d~vid~~G~  273 (378)
T PLN02827        264 ADYSFECVGD  273 (378)
T ss_pred             CCEEEECCCC
Confidence            9999999984

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=94.93  E-value=0.2  Score=43.04  Aligned_cols=75  Identities=19%  Similarity=0.306  Sum_probs=50.1

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC-CCcc
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ-GKLN   80 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~~id   80 (259)
                      ++||.|+++++|.++++.+...|++|+.+.+++++.+.+ +++   +...   ..+..+.+..+++    .+..+ +.+|
T Consensus       168 ~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~---v~~~~~~~~~~~~----~~~~~~~~vd  236 (341)
T cd08297         168 WVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELA-KEL---GADA---FVDFKKSDDVEAV----KELTGGGGAH  236 (341)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHc---CCcE---EEcCCCccHHHHH----HHHhcCCCCC
Confidence            689999999999999999999999999999998776544 333   2211   1223332222222    22221 3699


Q ss_pred             EEEEcCC
Q 024994           81 ILINNAA   87 (259)
Q Consensus        81 ~vi~~ag   87 (259)
                      .++++.+
T Consensus       237 ~vl~~~~  243 (341)
T cd08297         237 AVVVTAV  243 (341)
T ss_pred             EEEEcCC
Confidence            9998665

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=94.92  E-value=0.18  Score=43.95  Aligned_cols=72  Identities=21%  Similarity=0.288  Sum_probs=46.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      +++||.|+ |+||..+++.+...|++|++++.+.++.....+++   +....   .|..+.+.       +.+.. +.+|
T Consensus       185 ~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~---Ga~~v---i~~~~~~~-------~~~~~-~~~D  249 (360)
T PLN02586        185 KHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRL---GADSF---LVSTDPEK-------MKAAI-GTMD  249 (360)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhC---CCcEE---EcCCCHHH-------HHhhc-CCCC
Confidence            47888765 99999999999899999988887766554444333   32211   23333222       22222 3589


Q ss_pred             EEEEcCC
Q 024994           81 ILINNAA   87 (259)
Q Consensus        81 ~vi~~ag   87 (259)
                      ++|.+.|
T Consensus       250 ~vid~~g  256 (360)
T PLN02586        250 YIIDTVS  256 (360)
T ss_pred             EEEECCC
Confidence            9999988

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=94.91  E-value=0.24  Score=43.03  Aligned_cols=38  Identities=24%  Similarity=0.201  Sum_probs=32.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDA   39 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~   39 (259)
                      +++||+| ++++|..+++.+...|+ +|+++++++++.+.
T Consensus       179 ~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~  217 (361)
T cd08231         179 DTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLEL  217 (361)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHH
Confidence            3789997 59999999999999999 99999988877643

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=94.88  E-value=0.26  Score=42.09  Aligned_cols=41  Identities=27%  Similarity=0.181  Sum_probs=35.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLH   42 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~   42 (259)
                      |++.|.|+ |.+|..++..|++.|++|.+++|+++..+.+.+
T Consensus         2 mkI~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~   42 (325)
T PRK00094          2 MKIAVLGA-GSWGTALAIVLARNGHDVTLWARDPEQAAEINA   42 (325)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH
Confidence            46888986 899999999999999999999999877665544

>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=94.88  E-value=0.43  Score=40.48  Aligned_cols=87  Identities=17%  Similarity=0.107  Sum_probs=55.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHH----------HHhcCCcEEEEEecCCCHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE----------WKNKGFKVTGSVCDLSSREQREKLIET   70 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~----------~~~~~~~~~~~~~D~~~~~~~~~~~~~   70 (259)
                      +++-|.| .|-+|.++++.|.++|++|++.+|++++.+.+.+.          +-+......++..-+.+.+.++.+++.
T Consensus         1 m~Ig~IG-lG~mG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~~~s~~~~~~~~~~advVi~~vp~~~~~~~v~~~   79 (299)
T PRK12490          1 MKLGLIG-LGKMGGNMAERLREDGHEVVGYDVNQEAVDVAGKLGITARHSLEELVSKLEAPRTIWVMVPAGEVTESVIKD   79 (299)
T ss_pred             CEEEEEc-ccHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecCCHHHHHHhCCCCCEEEEEecCchHHHHHHHH
Confidence            4567776 48999999999999999999999998876654321          000000012334445555677777776


Q ss_pred             HHHHcCCCccEEEEcCCCC
Q 024994           71 VTSIFQGKLNILINNAAIA   89 (259)
Q Consensus        71 ~~~~~~~~id~vi~~ag~~   89 (259)
                      +.... .+=.++|++....
T Consensus        80 i~~~l-~~g~ivid~st~~   97 (299)
T PRK12490         80 LYPLL-SPGDIVVDGGNSR   97 (299)
T ss_pred             HhccC-CCCCEEEECCCCC
Confidence            65544 2335777776643

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=94.87  E-value=0.24  Score=43.51  Aligned_cols=73  Identities=19%  Similarity=0.269  Sum_probs=47.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      ++++|.|+ |++|..+++.....|++|++++++.++..+..+++   +....   .|..+.+.       +.+.. +.+|
T Consensus       180 ~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~l---Ga~~~---i~~~~~~~-------v~~~~-~~~D  244 (375)
T PLN02178        180 KRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRL---GADSF---LVTTDSQK-------MKEAV-GTMD  244 (375)
T ss_pred             CEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhC---CCcEE---EcCcCHHH-------HHHhh-CCCc
Confidence            36888876 89999999999999999999988766543433332   32211   23333221       22222 3699


Q ss_pred             EEEEcCCC
Q 024994           81 ILINNAAI   88 (259)
Q Consensus        81 ~vi~~ag~   88 (259)
                      ++|.+.|.
T Consensus       245 ~vid~~G~  252 (375)
T PLN02178        245 FIIDTVSA  252 (375)
T ss_pred             EEEECCCc
Confidence            99999883

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=94.87  E-value=0.5  Score=40.18  Aligned_cols=109  Identities=11%  Similarity=0.078  Sum_probs=69.3

Q ss_pred             EEcCcchHHHHHHHHHHHCCC--EEEEeeCChhHHHHHHHHHHhcC----CcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            5 VTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKG----FKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         5 ItG~s~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |.|+ |.+|.+++..|+.++.  .+++++++.+.++....+++...    .++.+.   ..+.+.           + ..
T Consensus         1 iIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~---~~~~~~-----------~-~d   64 (299)
T TIGR01771         1 IIGA-GNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIR---SGDYSD-----------C-KD   64 (299)
T ss_pred             CCCc-CHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEe---cCCHHH-----------H-CC
Confidence            3565 9999999999999885  69999999888777777776431    122221   123222           1 57


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC-CCCEEEEecCCC
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVG  139 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~isS~~  139 (259)
                      -|++|..||.... +  .++.   .+.++.|..-.-.+.+.+    .+. .++.++++|-..
T Consensus        65 aDivVitag~~rk-~--g~~R---~dll~~N~~i~~~~~~~i----~~~~p~~~vivvsNP~  116 (299)
T TIGR01771        65 ADLVVITAGAPQK-P--GETR---LELVGRNVRIMKSIVPEV----VKSGFDGIFLVATNPV  116 (299)
T ss_pred             CCEEEECCCCCCC-C--CCCH---HHHHHHHHHHHHHHHHHH----HHhCCCeEEEEeCCHH
Confidence            8999999997532 1  2232   344556665555554444    433 467888888754

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=94.87  E-value=0.24  Score=42.12  Aligned_cols=76  Identities=14%  Similarity=0.266  Sum_probs=49.8

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC-CCcc
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ-GKLN   80 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~~id   80 (259)
                      +++|.|+++++|..+++.+...|+.++.+.++.++.+.+ .++   +.. .+  .+..+.+.   ..+++.+..+ ..+|
T Consensus       143 ~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~-~~--~~~~~~~~---~~~~~~~~~~~~~~d  212 (334)
T PTZ00354        143 SVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC-KKL---AAI-IL--IRYPDEEG---FAPKVKKLTGEKGVN  212 (334)
T ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCc-EE--EecCChhH---HHHHHHHHhCCCCce
Confidence            689999999999999999999999988888887766554 222   321 11  22222221   2222222221 3599


Q ss_pred             EEEEcCC
Q 024994           81 ILINNAA   87 (259)
Q Consensus        81 ~vi~~ag   87 (259)
                      .++++.|
T Consensus       213 ~~i~~~~  219 (334)
T PTZ00354        213 LVLDCVG  219 (334)
T ss_pred             EEEECCc
Confidence            9999876

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=94.86  E-value=0.087  Score=39.39  Aligned_cols=37  Identities=32%  Similarity=0.401  Sum_probs=28.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIEL   37 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~   37 (259)
                      |+++|.|-|.-+|+.++..|.++|++|..+.++...+
T Consensus        29 k~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l   65 (140)
T cd05212          29 KKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQL   65 (140)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCH
Confidence            5788888888888888888888888888887655433

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p

Probab=94.85  E-value=0.23  Score=46.25  Aligned_cols=38  Identities=13%  Similarity=0.275  Sum_probs=30.9

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHH
Q 024994            2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDAR   40 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~   40 (259)
                      +|||.|+ ||+|..+++.|+.-|. +++++|.+.-...++
T Consensus       340 kVLIvGa-GGLGs~VA~~La~~GVg~ItlVD~D~Ve~SNL  378 (664)
T TIGR01381       340 KVLLLGA-GTLGCNVARCLIGWGVRHITFVDNGKVSYSNP  378 (664)
T ss_pred             eEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCCEECCCcc
Confidence            6889988 9999999999999997 788888765444333

This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy.

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=94.84  E-value=0.29  Score=35.97  Aligned_cols=42  Identities=24%  Similarity=0.294  Sum_probs=32.3

Q ss_pred             EEEEcCcchHHHHHHHHHHHCC--CEEEEee--CChhHHHHHHHHH
Q 024994            3 ALVTGGTRGIGHATVEELARFG--AIVHTCS--RNQIELDARLHEW   44 (259)
Q Consensus         3 ~lItG~s~giG~~~a~~l~~~G--~~V~~~~--r~~~~~~~~~~~~   44 (259)
                      +.|.|+||.||.....-+.++.  ++|+.+.  +|.+.+.+.+++.
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f   46 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAREF   46 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHHH
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHHh
Confidence            5799999999999999999987  6776654  5666666555554

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>PRK14967 putative methyltransferase; Provisional

Probab=94.84  E-value=0.99  Score=36.46  Aligned_cols=73  Identities=15%  Similarity=0.102  Sum_probs=48.6

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      ++|-.|+++|.   ++..+++.|. +|++++.+...++...+.+...+.++.++..|+.+.      +.      .+++|
T Consensus        39 ~vLDlGcG~G~---~~~~la~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~d~~~~------~~------~~~fD  103 (223)
T PRK14967         39 RVLDLCTGSGA---LAVAAAAAGAGSVTAVDISRRAVRSARLNALLAGVDVDVRRGDWARA------VE------FRPFD  103 (223)
T ss_pred             eEEEecCCHHH---HHHHHHHcCCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEECchhhh------cc------CCCee
Confidence            57777876644   3445555676 899999999888766555554444667777776431      11      14799


Q ss_pred             EEEEcCCCC
Q 024994           81 ILINNAAIA   89 (259)
Q Consensus        81 ~vi~~ag~~   89 (259)
                      +|+.|..+.
T Consensus       104 ~Vi~npPy~  112 (223)
T PRK14967        104 VVVSNPPYV  112 (223)
T ss_pred             EEEECCCCC
Confidence            999998654

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=94.83  E-value=0.16  Score=44.78  Aligned_cols=71  Identities=17%  Similarity=0.257  Sum_probs=49.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+++|+|++ .+|..+++.+.+.|++|+.++.+........      .+  .++..|..|.+.+.+++++      .++|
T Consensus        13 ~~ilIiG~g-~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~------ad--~~~~~~~~d~~~l~~~~~~------~~id   77 (395)
T PRK09288         13 TRVMLLGSG-ELGKEVAIEAQRLGVEVIAVDRYANAPAMQV------AH--RSHVIDMLDGDALRAVIER------EKPD   77 (395)
T ss_pred             CEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCCchHHh------hh--heEECCCCCHHHHHHHHHH------hCCC
Confidence            589999874 7999999999999999999998764321111      01  1456777887776666543      3688


Q ss_pred             EEEEcC
Q 024994           81 ILINNA   86 (259)
Q Consensus        81 ~vi~~a   86 (259)
                      .|+...
T Consensus        78 ~vi~~~   83 (395)
T PRK09288         78 YIVPEI   83 (395)
T ss_pred             EEEEee
Confidence            887644

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=94.82  E-value=0.067  Score=42.06  Aligned_cols=39  Identities=23%  Similarity=0.190  Sum_probs=30.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDAR   40 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~   40 (259)
                      |++-|.|. |.+|..+|..|+++|++|+.++.++++.+.+
T Consensus         1 M~I~ViGl-GyvGl~~A~~lA~~G~~V~g~D~~~~~v~~l   39 (185)
T PF03721_consen    1 MKIAVIGL-GYVGLPLAAALAEKGHQVIGVDIDEEKVEAL   39 (185)
T ss_dssp             -EEEEE---STTHHHHHHHHHHTTSEEEEE-S-HHHHHHH
T ss_pred             CEEEEECC-CcchHHHHHHHHhCCCEEEEEeCChHHHHHH
Confidence            56777754 9999999999999999999999999876654

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>KOG2013 consensus SMT3/SUMO-activating complex, catalytic component UBA2 [Posttranslational modification, protein turnover, chaperones]

Probab=94.82  E-value=0.11  Score=46.16  Aligned_cols=80  Identities=19%  Similarity=0.229  Sum_probs=61.8

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      ++|+.|| ||||.++.+-|+-.|+ .|.+++-+.-.+.++.+       .+.|.+=|+.....  .+..++.++|..+++
T Consensus        14 riLvVGa-GGIGCELLKnLal~gf~~IhiIDlDTIDlSNLNR-------QFLFrkkhVgqsKA--~vA~~~v~~Fnpn~~   83 (603)
T KOG2013|consen   14 RILVVGA-GGIGCELLKNLALTGFEEIHIIDLDTIDLSNLNR-------QFLFRKKHVGQSKA--TVAAKAVKQFNPNIK   83 (603)
T ss_pred             eEEEEec-CcccHHHHHHHHHhcCCeeEEEeccceeccchhh-------hheeehhhcCchHH--HHHHHHHHHhCCCCc
Confidence            5899998 9999999999999998 69999988877766654       35566667766443  355666677766899


Q ss_pred             EEEEcCCCCCC
Q 024994           81 ILINNAAIAFV   91 (259)
Q Consensus        81 ~vi~~ag~~~~   91 (259)
                      ++.++|.+..+
T Consensus        84 l~~yhanI~e~   94 (603)
T KOG2013|consen   84 LVPYHANIKEP   94 (603)
T ss_pred             eEeccccccCc
Confidence            99999987643

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=94.81  E-value=0.51  Score=39.65  Aligned_cols=105  Identities=10%  Similarity=0.135  Sum_probs=70.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      +|++|.||+|..|.-+-+--.-.|+.|+...=+.++..-+..++..   ..   ..|--++..+.+++++   .++..+|
T Consensus       155 eTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~---d~---afNYK~e~~~~~aL~r---~~P~GID  225 (343)
T KOG1196|consen  155 ETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGF---DD---AFNYKEESDLSAALKR---CFPEGID  225 (343)
T ss_pred             CEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCC---cc---ceeccCccCHHHHHHH---hCCCcce
Confidence            5899999999999866665555699999998888887665544321   10   1344444455555554   4546799


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccC
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR  142 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~  142 (259)
                      +-|-|.|..                          ++.+.+..|..  .+||+..+-++.+.
T Consensus       226 iYfeNVGG~--------------------------~lDavl~nM~~--~gri~~CG~ISqYN  259 (343)
T KOG1196|consen  226 IYFENVGGK--------------------------MLDAVLLNMNL--HGRIAVCGMISQYN  259 (343)
T ss_pred             EEEeccCcH--------------------------HHHHHHHhhhh--ccceEeeeeehhcc
Confidence            999999952                          23344555554  48999988777653

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	259
1xq1_A	266	X-Ray Structure Of Putative Tropinone Reducatse Fro		2e-82
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		6e-81
2ae2_A	260	Tropinone Reductase-Ii Complexed With Nadp+ And Pse		3e-77
1ipe_A	259	Tropinone Reductase-Ii Complexed With Nadph Length		4e-77
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		3e-33
2zat_A	260	Crystal Structure Of A Mammalian Reductase Length =		9e-33
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		1e-31
1yxm_A	303	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa		1e-29
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-29
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		9e-29
4ibo_A	271	Crystal Structure Of A Putative Gluconate Dehydroge		9e-28
4b79_A	242	The Aeropath Project And Pseudomonas Aeruginosa Hig		1e-27
3cxr_A	291	Crystal Structure Of Gluconate 5-Dehydrogase From S		2e-27
1x1e_A	239	Crystal Structure Of Tt0495 Protein From Thermus Th		4e-27
4g81_D	255	Crystal Structure Of A Hexonate Dehydrogenase Ortho		6e-27
3gaf_A	256	2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid De		6e-27
3pk0_A	262	Crystal Structure Of Short-Chain DehydrogenaseREDUC		2e-26
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		6e-26
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		8e-26
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-25
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		2e-25
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		2e-25
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		2e-25
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		2e-25
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		2e-25
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		2e-25
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		2e-25
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		2e-25
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-25
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		3e-25
2d1y_A	256	Crystal Structure Of Tt0321 From Thermus Thermophil		4e-25
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		6e-25
3awd_A	260	Crystal Structure Of Gox2181 Length = 260		7e-25
3gk3_A	269	Crystal Structure Of Acetoacetyl-Coa Reductase From		1e-24
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		1e-24
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		2e-24
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		3e-24
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		4e-24
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		6e-24
4iin_A	271	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		7e-24
3r1i_A	276	Crystal Structure Of A Short-Chain Type Dehydrogena		7e-24
2ph3_A	245	Crystal Structure Of 3-oxoacyl-[acyl Carrier Protei		7e-24
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		9e-24
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		2e-23
3d3w_A	244	Structure Of L-Xylulose Reductase With Bound Coenzy		4e-23
2wdz_A	254	Crystal Structure Of The Short Chain Dehydrogenase		4e-23
1pr9_A	244	Human L-Xylulose Reductase Holoenzyme Length = 244		6e-23
2nm0_A	253	Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl		6e-23
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		7e-23
4afn_A	269	Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote		9e-23
3f9i_A	249	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-22
1iy8_A	267	Crystal Structure Of Levodione Reductase Length = 2		1e-22
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		2e-22
3enn_A	249	2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		2e-22
3emk_A	246	2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		2e-22
3ak4_A	263	Crystal Structure Of Nadh-Dependent Quinuclidinone		2e-22
3lyl_A	247	Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas		2e-22
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		3e-22
3oic_A	258	Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl		3e-22
3o38_A	266	Crystal Structure Of A Short Chain Dehydrogenase Fr		3e-22
1cyd_A	244	Carbonyl Reductase Complexed With Nadph And 2-Propa		5e-22
1uzl_A	247	Maba From Mycobacterium Tuberculosis Length = 247		6e-22
3d3w_B	245	Structure Of L-Xylulose Reductase With Bound Coenzy		7e-22
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		8e-22
3vtz_A	269	Structure Of Thermoplasma Volcanium Aldohexose Dehy		1e-21
2ntn_A	267	Crystal Structure Of Maba-c60v/g139a/s144l Length =		2e-21
4dml_A	269	3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn		2e-21
1uzm_A	247	Maba From Mycobacterium Tuberculosis Length = 247		2e-21
1zem_A	262	Crystal Structure Of Nad+-Bound Xylitol Dehydrogena		6e-21
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		1e-20
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		2e-20
3a28_C	258	Crystal Structure Of L-2,3-Butanediol Dehydrogenase		3e-20
1geg_A	256	Cryatal Structure Analysis Of Meso-2,3-Butanediol D		5e-20
3ezl_A	256	Crystal Structure Of Acetyacetyl-Coa Reductase From		8e-20
2q2q_A	255	Structure Of D-3-Hydroxybutyrate Dehydrogenase From		1e-19
1o5i_A	249	Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei		1e-19
4fgs_A	273	Crystal Structure Of A Probable Dehydrogenase Prote		1e-19
3aus_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		1e-19
3ay7_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		1e-19
3ay6_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		1e-19
3uf0_A	273	Crystal Structure Of A Putative Nad(P) Dependent Gl		1e-19
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		2e-19
1edo_A	244	The X-Ray Structure Of Beta-Keto Acyl Carrier Prote		2e-19
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		2e-19
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		5e-19
4fn4_A	254	Short-chain Nad(h)-dependent Dehydrogenase/reductas		6e-19
1nff_A	260	Crystal Structure Of Rv2002 Gene Product From Mycob		9e-19
3tzq_B	271	Crystal Structure Of A Short-Chain Type Dehydrogena		1e-18
1zjy_A	251	Structure Of R-Specific Alcohol Dehydrogenase (Muta		1e-18
1nxq_A	251	Crystal Structure Of R-Alcohol Dehydrogenase (Radh)		1e-18
1xkq_A	280	Crystal Structure Of Short-Chain DehydrogenaseREDUC		1e-18
3n74_A	261	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-18
3v2g_A	271	Crystal Structure Of A DehydrogenaseREDUCTASE FROM		2e-18
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		3e-18
4fc6_A	277	Studies On Dcr Shed New Light On Peroxisomal Beta-O		5e-18
3oec_A	317	Crystal Structure Of Carveol Dehydrogenase From Myc		5e-18
3icc_A	255	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car		5e-18
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		1e-17
3un1_A	260	Crystal Structure Of An Oxidoreductase From Sinorhi		1e-17
3i4f_A	264	Structure Of Putative 3-oxoacyl-reductase From Baci		1e-17
1h5q_A	265	Mannitol Dehydrogenase From Agaricus Bisporus Lengt		1e-17
2pd6_A	264	Structure Of Human Hydroxysteroid Dehydrogenase Typ		1e-17
1nfr_A	260	Rv2002 Gene Product From Mycobacterium Tuberculosis		2e-17
3nug_A	247	Crystal Structure Of Wild Type Tetrameric Pyridoxal		2e-17
1g6k_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant E		2e-17
3lf1_A	265	Apo Structure Of The Short Chain Oxidoreductase Q9h		3e-17
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		3e-17
1ybv_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		3e-17
1rwb_A	261	Cooperative Effect Of Two Surface Amino Acid Mutati		3e-17
1doh_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		4e-17
2z1n_A	260	Crystal Structure Of Ape0912 From Aeropyrum Pernix		4e-17
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		4e-17
4iiu_A	267	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		6e-17
3i3o_A	291	2.06 Angstrom Resolution Crystal Structure Of A Sho		6e-17
3ctm_A	279	Crystal Structure Of A Carbonyl Reductase From Cand		7e-17
3v8b_A	283	Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro		7e-17
2hsd_A	253	The Refined Three-Dimensional Structure Of 3alpha,2		8e-17
3ndr_A	247	Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro		8e-17
3grp_A	266	2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-		9e-17
1gco_A	261	Crystal Structure Of Glucose Dehydrogenase Complexe		1e-16
1gee_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant Q		1e-16
4imr_A	275	Crystal Structure Of 3-oxoacyl (acyl-carrier-protei		2e-16
4iqg_C	271	Crystal Structure Of Bpro0239 Oxidoreductase From P		2e-16
4hp8_A	247	Crystal Structure Of A Putative 2-Deoxy-D-Gluconate		2e-16
3r3s_A	294	Structure Of The Ygha Oxidoreductase From Salmonell		3e-16
3ijr_A	291	2.05 Angstrom Resolution Crystal Structure Of A Sho		3e-16
2dtd_A	264	Structure Of Thermoplasma Acidophilum Aldohexose De		3e-16
2zk7_A	257	Structure Of A C-Terminal Deletion Mutant Of Thermo		3e-16
4e6p_A	259	Crystal Structure Of A Probable Sorbitol Dehydrogen		4e-16
2cfc_A	250	Structural Basis For Stereo Selectivity In The (R)-		6e-16
4eso_A	255	Crystal Structure Of A Putative Oxidoreductase Prot		1e-15
3vc7_A	254	Crystal Structure Of A Putative Oxidoreductase From		1e-15
2yz7_A	260	X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F		1e-15
3pgx_A	280	Crystal Structure Of A Putative Carveol Dehydrogena		1e-15
3u0b_A	454	Crystal Structure Of An Oxidoreductase From Mycobac		2e-15
3tox_A	280	Crystal Structure Of A Short Chain Dehydrogenase In		2e-15
1hdc_A	254	Mechanism Of Inhibition Of 3alpha,20beta-Hydroxyste		2e-15
3gvc_A	277	Crystal Structure Of Probable Short-Chain Dehydroge		3e-15
3uxy_A	266	The Crystal Structure Of Short Chain Dehydrogenase		5e-15
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		9e-15
3rku_A	287	Substrate Fingerprint And The Structure Of Nadp+ De		1e-14
1w6u_A	302	Structure Of Human Decr Ternary Complex Length = 30		1e-14
4e3z_A	272	Crystal Structure Of A Oxidoreductase From Rhizobiu		1e-14
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		1e-14
4e4y_A	244	The Crystal Structure Of A Short Chain Dehydrogenas		2e-14
3is3_A	270	Crystal Structure Of 17beta-Hydroxysteroid Dehydrog		3e-14
2a4k_A	263	3-Oxoacyl-[acyl Carrier Protein] Reductase From The		3e-14
4fw8_A	454	Crystal Structure Of Fabg4 Complexed With Coenzyme		3e-14
3t7c_A	299	Crystal Structure Of Carveol Dehydrogenase From Myc		4e-14
3v1t_C	462	Crystal Structure Of A Putative Ketoacyl Reductase		4e-14
3lls_A	475	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		4e-14
3m1l_A	432	Crystal Strucutre Of A C-Terminal Trunacted Mutant		4e-14
3q6i_A	446	Crystal Structure Of Fabg4 And Coenzyme Binary Comp		4e-14
2ztm_A	260	T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L		4e-14
2fwm_X	250	Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodih		5e-14
2ztu_A	260	T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C		5e-14
1uls_A	245	Crystal Structure Of Tt0140 From Thermus Thermophil		6e-14
3imf_A	257	1.99 Angstrom Resolution Crystal Structure Of A Sho		6e-14
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		7e-14
3tsc_A	277	Crystal Structure Of Short Chain Dehydrogenase Map_		7e-14
3itd_A	270	Crystal Structure Of An Inactive 17beta-Hydroxyster		8e-14
3tjr_A	301	Crystal Structure Of A Rv0851c Ortholog Short Chain		9e-14
3u5t_A	267	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		1e-13
3gdf_A	267	Crystal Structure Of The Nadp-Dependent Mannitol De		1e-13
1w73_A	302	Binary Structure Of Human Decr Solved By Semet Sad.		3e-13
1zbq_A	327	Crystal Structure Of Human 17-beta-hydroxysteroid D		3e-13
2bd0_A	244	Chlorobium Tepidum Sepiapterin Reductase Complexed		4e-13
3v2h_A	281	The Crystal Structure Of D-Beta-Hydroxybutyrate Deh		6e-13
3svt_A	281	Structure Of A Short-Chain Type DehydrogenaseREDUCT		6e-13
4egf_A	266	Crystal Structure Of A L-Xylulose Reductase From My		1e-12
2qq5_A	260	Crystal Structure Of Human Sdr Family Member 1 Leng		1e-12
2dkn_A	255	Crystal Structure Of The 3-alpha-hydroxysteroid Deh		2e-12
4gkb_A	258	Crystal Structure Of A Short Chain Dehydrogenase Ho		2e-12
1hxh_A	253	Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID D		3e-12
2et6_A	604	(3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid		3e-12
2et6_A	604	(3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid		1e-10
1ja9_A	274	Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen		5e-12
3uve_A	286	Crystal Structure Of Carveol Dehydrogenase ((+)-Tra		1e-11
1gz6_A	319	(3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat		1e-11
3bmc_B	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		2e-11
3bmc_A	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		3e-11
3afm_A	258	Crystal Structure Of Aldose Reductase A1-R Responsi		3e-11
2wd7_A	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		3e-11
3edm_A	259	Crystal Structure Of A Short Chain Dehydrogenase Fr		4e-11
1fjh_A	257	The Crystal Structure Of 3-Alpha-Hydroxysteroid Deh		6e-11
1yde_A	270	Crystal Structure Of Human Retinal Short-Chain Dehy		9e-11
3sx2_A	278	Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Ca		9e-11
3ged_A	247	Fingerprint And Structural Analysis Of A Apo Scor E		1e-10
2ag5_A	246	Crystal Structure Of Human Dhrs6 Length = 246		1e-10
2nwq_A	272	Short Chain Dehydrogenase From Pseudomonas Aerugino		2e-10
3kzv_A	254	The Crystal Structure Of A Cytoplasmic Protein With		2e-10
3oml_A	613	Structure Of Full-Length Peroxisomal Multifunctiona		3e-10
2ehd_A	234	Crystal Structure Analysis Of Oxidoreductase Length		3e-10
3jq7_A	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		3e-10
2wd7_B	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		4e-10
3jq7_B	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		4e-10
2c7v_A	268	Structure Of Trypanosoma Brucei Pteridine Reductase		4e-10
3s55_A	281	Crystal Structure Of A Putative Short-Chain Dehydro		4e-10
1zmo_A	244	Apo Structure Of Haloalcohol Dehalogenase Hhea Of A		5e-10
2jap_A	247	Clavulanic Acid Dehydrogenase: Structural And Bioch		7e-10
3m1a_A	281	The Crystal Structure Of A Short-Chain Dehydrogenas		9e-10
2o23_A	265	The Structure Of Wild-Type Human Hadh2 (17beta-Hydr		9e-10
1so8_A	261	Abeta-bound Human Abad Structure [also Known As 3-h		1e-09
3uwr_A	286	Crystal Structure Of Carveol Dehydrogenase From Myc		1e-09
2y93_A	281	Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2		1e-09
3ucx_A	264	The Structure Of A Short Chain Dehydrogenase From M		1e-09
2bgk_A	278	X-Ray Structure Of Apo-Secoisolariciresinol Dehydro		1e-09
1u7t_A	261	Crystal Structure Of AbadHSD10 WITH A BOUND INHIBIT		1e-09
2yw9_A	261	Crystal Structure Of Tt0143 From Thermus Thermophil		2e-09
1xg5_A	279	Structure Of Human Putative Dehydrogenase Mgc4172 I		2e-09
1bdb_A	277	Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From		2e-09
3asu_A	248	Crystal Structure Of Serine Dehydrogenase From Esch		2e-09
1ulu_A	261	Crystal Structure Of Tt0143 From Thermus Thermophil		3e-09
2p91_A	285	Crystal Structure Of Enoyl-[acyl-Carrier-Protein] R		4e-09
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		5e-09
2jah_A	247	Biochemical And Structural Analysis Of The Clavulan		8e-09
1mxf_A	276	Crystal Structure Of Inhibitor Complex Of Putative		1e-08
3oif_A	266	Crystal Structure Of Enoyl-Acp Reductases I (Fabi)		1e-08
3nrc_A	280	Crystal Stucture Of The Francisella Tularensis Enoy		2e-08
3f1l_A	252	The 0.95 A Structure Of An Oxidoreductase, Ycik Fro		2e-08
2jjy_A	268	Crystal Structure Of Francisella Tularensis Enoyl R		3e-08
1mxh_A	276	Crystal Structure Of Substrate Complex Of Putative		3e-08
1e6w_A	260	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		3e-08
3f5q_A	262	Crystal Structure Of Putative Short Chain Dehydroge		3e-08
1e3s_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		3e-08
3f5s_A	255	Crystal Structure Of Putatitve Short Chain Dehydrog		3e-08
1yb1_A	272	Crystal Structure Of Human 17-Beta-Hydroxysteroid D		4e-08
3g1t_A	258	Crystal Structure Of Short Chain Dehydrogenase From		4e-08
1e3w_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		5e-08
4da9_A	280	Crystal Structure Of Putative Short-Chain Dehydroge		5e-08
4h15_A	261	Crystal Structure Of A Short Chain Alcohol Dehydrog		6e-08
3i1j_A	247	Structure Of A Putative Short Chain Dehydrogenase F		6e-08
3p19_A	266	Improved Nadph-Dependent Blue Fluorescent Protein L		8e-08
3ppi_A	281	Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenas		1e-07
4ixt_A	254	Structure Of A 37-fold Mutant Of Halohydrin Dehalog		2e-07
3ek2_A	271	Crystal Structure Of Eonyl-(Acyl Carrier Protein) R		2e-07
3t4x_A	267	Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU		2e-07
1p33_A	289	Pteridine Reductase From Leishmania Tarentolae Comp		2e-07
3qlj_A	322	Crystal Structure Of A Short Chain Dehydrogenase Fr		3e-07
3d5q_A	272	Crystal Structure Of 11b-Hsd1 In Complex With Triaz		4e-07
3pdj_A	273	Crystal Structure Of Human 11-Beta-Hydroxysteroid D		4e-07
1xu7_A	286	Crystal Structure Of The Interface Open Conformatio		5e-07
2ilt_A	275	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		5e-07
2bel_A	283	Structure Of Human 11-Beta-Hydroxysteroid Dehydroge		5e-07
3ch6_A	286	Crystal Structure Of 11beta-Hsd1 Double Mutant (L26		5e-07
2rbe_A	275	The Discovery Of 2-Anilinothiazolones As 11beta-Hsd		5e-07
2irw_A	264	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		5e-07
3pxx_A	287	Crystal Structure Of Carveol Dehydrogenase From Myc		6e-07
4bb5_A	292	Free-Wilson And Structural Approaches To Co-Optimis		7e-07
1a27_A	289	Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 C		7e-07
4hfr_A	272	Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In		7e-07
4bb6_A	292	Free-Wilson And Structural Approaches To Co-Optimis		8e-07
3ioy_A	319	Structure Of Putative Short-Chain Dehydrogenase (Sa		8e-07
2pfg_A	276	Crystal Structure Of Human Cbr1 In Complex With Big		8e-07
2hrb_A	274	Crystal Structure Of Human Carbonyl Reductase 3, Co		8e-07
1wma_A	276	Crystal Structure Of Human Cbr1 In Complex With Hyd		8e-07
3f1k_A	252	Crystal Structure Of Ycik From E. Coli, An Oxidored		9e-07
1fdu_A	327	Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 M		1e-06
3ksu_A	262	Crystal Structure Of Short-Chain Dehydrogenase From		1e-06
1fdw_A	327	Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 M		1e-06
1equ_A	327	Type 1 17-Beta Hydroxysteroid Dehydrogenase Equilin		1e-06
1fds_A	327	Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 C		1e-06
1iol_A	327	Estrogenic 17-beta Hydroxysteroid Dehydrogenase Com		1e-06
1pwx_A	254	Crystal Structure Of The Haloalcohol Dehalogenase H		1e-06
1n5d_A	288	Crystal Structure Of Porcine Testicular Carbonyl Re		2e-06
3uce_A	223	Crystal Structure Of A Small-Chain Dehydrogenase In		2e-06
4eit_A	276	Crystal Structure Of An Enoyl-(Acyl Carrier Protein		5e-06
3tl3_A	257	Structure Of A Short-Chain Type DehydrogenaseREDUCT		6e-06
3e03_A	274	Crystal Structure Of A Putative Dehydrogenase From		6e-06
3e9q_A	273	Crystal Structure Of The Short Chain Dehydrogenase		7e-06
1xse_A	295	Crystal Structure Of Guinea Pig 11beta-Hydroxystero		8e-06
3lz6_A	263	Guinea Pig 11beta Hydroxysteroid Dehydrogenase With		9e-06
3gmd_A	264	Structure-Based Design Of 7-Azaindole-Pyrrolidines		9e-06
3g49_A	277	N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-		1e-05
2xox_A	288	Crystal Structure Of Pteridine Reductase (Ptr1) Fro		1e-05
3dwf_A	276	Crystal Structure Of The Guinea Pig 11beta-Hydroxys		1e-05
3tn7_A	257	Crystal Structure Of Short-Chain Alcohol Dehydrogen		1e-05
3l77_A	235	X-Ray Structure Alcohol Dehydrogenase From Archaeon		1e-05
1w0c_A	307	Inhibition Of Leishmania Major Pteridine Reductase		1e-05
3iah_A	256	Crystal Structure Of Short Chain Dehydrogenase (yci		1e-05
1e92_A	288	Pteridine Reductase 1 From Leishmania Major Complex		1e-05
1e7w_A	291	One Active Site, Two Modes Of Reduction Correlate T		1e-05
2qhx_A	328	Structure Of Pteridine Reductase From Leishmania Ma		1e-05
4all_A	277	Crystal Structure Of S. Aureus Fabi In Complex With		1e-05
4fs3_A	256	Crystal Structure Of Staphylococcus Aureus Enoyl-Ac		1e-05
3gnt_A	256	Crystal Structure Of The Staphylococcus Aureus Enoy		2e-05
1y5m_A	276	The Crystal Structure Of Murine 11b-Hydroxysteroid		2e-05
3gns_A	260	Crystal Structure Of The Staphylococcus Aureus Enoy		2e-05
4ali_A	282	Crystal Structure Of S. Aureus Fabi In Complex With		2e-05
3grk_A	293	Crystal Structure Of Short Chain Dehydrogenase Redu		3e-05
3nyw_A	250	Crystal Structure Of A Betaketoacyl-[acp] Reductase		3e-05
2qio_A	256	X-Ray Structure Of Enoyl-Acyl Carrier Protein Reduc		7e-05
3ojf_A	257	Crystal Structure Of The Bacillus Cereus Enoyl-Acyl		8e-05
3e9n_A	245	Crystal Structure Of A Putative Short-Chain Dehydro		1e-04
1uay_A	242	Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa Dehy		1e-04
3kvo_A	346	Crystal Structure Of The Catalytic Domain Of Human		2e-04
1qsg_A	265	Crystal Structure Of Enoyl Reductase Inhibition By		2e-04
1c14_A	262	Crystal Structure Of E Coli Enoyl Reductase-nad+-tr		2e-04
1dfg_A	261	X-Ray Structure Of Escherichia Coli Enoyl Reductase		2e-04
1d7o_A	297	Crystal Structure Of Brassica Napus Enoyl Acyl Carr		2e-04
3pjd_A	270	Structure Of Enr G93a Mutant-Nad+-Triclosan Complex		2e-04
3pje_A	270	Structure Of Enr G93s Mutant-Nad+-Triclosan Complex		2e-04
3pjf_A	270	Structure Of Enr G93v Mutant-Nad+-Triclosan Complex		2e-04
1eno_A	312	Brassica Napus Enoyl Acp ReductaseNAD BINARY COMPLE		2e-04
1nas_A	259	Sepiapterin Reductase Complexed With N-acetyl Serot		3e-04
1sep_A	261	Mouse Sepiapterin Reductase Complexed With Nadp And		3e-04
3u9l_A	324	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		3e-04
1cwu_A	296	Brassica Napus Enoyl Acp Reductase A138g Mutant Com		4e-04

>pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From Arabidopsis Thaliana Gene At1g07440 Length = 266

Iteration: 1
 Score =  301 bits (772), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 149/241 (61%), Positives = 178/241 (73%), Gaps = 4/241 (1%)
Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           T LVTGGT+GIGHA VEE A FGA++HTC+RN+ EL+  L +W+ KGF+VTGSVCD S R
Sbjct: 16  TVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLR 75
Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
            +REKL++TV+S+F GKL+ILINN      KPT+D TAED S   STN ES +HLSQLAH
Sbjct: 76  PEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAH 135
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           PL KASG G+I+F+SS+ GV      S+Y A KGA+NQL +NLACEWA D IR N VAP 
Sbjct: 136 PLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPA 195
Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
           VI T    P  E     EF   +  + P+GR GEP+EVSSLVAFLC+PAASYITGQ ICV
Sbjct: 196 VIAT----PLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYITGQTICV 251
Query: 242 D 242
           D
Sbjct: 252 D 252

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score =  296 bits (759), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 141/242 (58%), Positives = 182/242 (75%), Gaps = 1/242 (0%)
Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           TALVTGG++GIG+A VEELA  GA V+TCSRN+ ELD  L  W+ KG  V GSVCDL SR
Sbjct: 23  TALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSR 82
Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
            +R+KL++TV  +F GKLNIL+NNA +   K   D T +D + +  TNFE+ +HLSQ+A+
Sbjct: 83  TERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAY 142
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           PL KAS NG+++F+SS+ G   +PSVSLY A KGA+NQ+TK+LACEWAKDNIR N+VAP 
Sbjct: 143 PLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPG 202
Query: 182 VIKTSMIK-PFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
           VI T +++   ++ P   E +D    +TP+GRAG+P EVS+L+AFLC PAASYITGQII 
Sbjct: 203 VILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASYITGQIIW 262
Query: 241 VD 242
            D
Sbjct: 263 AD 264

>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260

Iteration: 1
 Score =  284 bits (727), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 139/241 (57%), Positives = 175/241 (72%)
Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           TALVTGG+RGIG+  VEELA  GA V+TCSRNQ EL+  L +W++KGFKV  SVCDLSSR
Sbjct: 11  TALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSR 70
Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
            +R++L+ TV + F GKLNIL+NNA I   K   D T ED S + S NFE+ +HLS LAH
Sbjct: 71  SERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAH 130
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P  KAS  G++VFISSV G   +P  ++YGA KGAM+QLT+ LA EWAKDNIR N V P 
Sbjct: 131 PFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPG 190
Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
           VI TS+++   + PE  E L+ +  +  + R GEP E++++VAFLC PAASY+TGQII V
Sbjct: 191 VIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYVTGQIIYV 250
Query: 242 D 242
           D
Sbjct: 251 D 251

>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259

Iteration: 1
 Score =  284 bits (726), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 139/241 (57%), Positives = 175/241 (72%)
Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           TALVTGG+RGIG+  VEELA  GA V+TCSRNQ EL+  L +W++KGFKV  SVCDLSSR
Sbjct: 10  TALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSR 69
Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
            +R++L+ TV + F GKLNIL+NNA I   K   D T ED S + S NFE+ +HLS LAH
Sbjct: 70  SERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAH 129
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P  KAS  G++VFISSV G   +P  ++YGA KGAM+QLT+ LA EWAKDNIR N V P 
Sbjct: 130 PFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPG 189
Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
           VI TS+++   + PE  E L+ +  +  + R GEP E++++VAFLC PAASY+TGQII V
Sbjct: 190 VIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYVTGQIIYV 249
Query: 242 D 242
           D
Sbjct: 250 D 250

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score =  138 bits (348), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 88/240 (36%), Positives = 126/240 (52%), Gaps = 5/240 (2%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           ALVT  T GIG A    LA+ GA V   SR Q  +D  +   + +G  VTG+VC +   E
Sbjct: 18  ALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVTGTVCHVGKAE 77
Query: 63  QREKLIETVTSIFQGKLNILINNAAI-AFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
            RE+L+ T   +  G ++IL++NAA+  F    +D+T E        N ++   +++   
Sbjct: 78  DRERLVATAVKL-HGGIDILVSNAAVNPFFGSIMDVTEEVWDKTLDINVKAPALMTKAVV 136
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P  +  G GS+V +SS+      P  S Y   K A+  LTK LA E A  NIR N +AP 
Sbjct: 137 PEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIELAPRNIRVNCLAPG 196
Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
           +IKTS  +      E  E +    R   I R GEP++ + +V+FLC   ASYITG+ + V
Sbjct: 197 LIKTSFSRMLWMDKEKEESMKETLR---IRRLGEPEDCAGIVSFLCSEDASYITGETVVV 253

>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260

Iteration: 1
 Score =  136 bits (343), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 85/240 (35%), Positives = 128/240 (53%), Gaps = 5/240 (2%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           ALVT  T GIG A    LA+ GA V   SR Q  +D  +   + +G  VTG+VC +   E
Sbjct: 17  ALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAE 76
Query: 63  QREKLIETVTSIFQGKLNILINNAAI-AFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
            RE+L+    ++  G ++IL++NAA+  F    +D T E    +   N ++   +++   
Sbjct: 77  DRERLVAMAVNL-HGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVV 135
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P  +  G GS++ +SSVG     P++  Y   K A+  LTKNLA E A  NIR N +AP 
Sbjct: 136 PEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPG 195
Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
           +IKT+  +         E++    R   I R G P++ + +V+FLC   ASYITG+ + V
Sbjct: 196 LIKTNFSQVLWMDKARKEYMKESLR---IRRLGNPEDCAGIVSFLCSEDASYITGETVVV 252

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score =  133 bits (334), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 85/242 (35%), Positives = 125/242 (51%), Gaps = 6/242 (2%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSSR 61
           ALVTGG+RG+G    + LA  G  V   SRN  E      +   K G +     CD+S+ 
Sbjct: 24  ALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNY 83
Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           E+ +KL+E V   F GKL+ ++N A I    P  +   ++   V   N    +++ + A 
Sbjct: 84  EEVKKLLEAVKEKF-GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAF 142
Query: 122 PLFKASGNGSIVFISSVGGVR-GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
            L + S N SI+ I S+      +P++S Y A KG +  LTK LA EW +  IR N +AP
Sbjct: 143 SLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAP 202
Query: 181 WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
              +T M +     PE    LD + ++ P+GR G P+++  +  FL    A Y+TGQII 
Sbjct: 203 GWYRTKMTEAVFSDPEK---LDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKYVTGQIIF 259
Query: 241 VD 242
           VD
Sbjct: 260 VD 261

>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303

Iteration: 1
 Score =  126 bits (317), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/245 (36%), Positives = 123/245 (50%), Gaps = 8/245 (3%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK-----NKGFKVTGSVCD 57
           A+VTGG  GIG A V+EL   G+ V   SR    L +   E +      K  +V    C+
Sbjct: 21  AIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCN 80
Query: 58  LSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLS 117
           + + E+   L+++    F GK+N L+NN    F+ P   I+++    V  TN    F++ 
Sbjct: 81  IRNEEEVNNLVKSTLDTF-GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMC 139
Query: 118 QLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
           +  +  +     GSIV I  V    G P     GA +  +  LTK+LA EWA   IR N 
Sbjct: 140 KAVYSSWMKEHGGSIVNII-VPTKAGFPLAVHSGAARAGVYNLTKSLALEWACSGIRINC 198
Query: 178 VAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ 237
           VAP VI  S       G  G  F +G  ++ P  R G P+EVSS+V FL  PAAS+ITGQ
Sbjct: 199 VAPGVI-YSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAASFITGQ 257
Query: 238 IICVD 242
            + VD
Sbjct: 258 SVDVD 262

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score =  126 bits (316), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/241 (35%), Positives = 125/241 (51%), Gaps = 8/241 (3%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           A+VTG +RGIG A   ELAR GA+V   +  +   +     +K  G +  G+V +++   
Sbjct: 31  AIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDAT 90
Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQ-LAH 121
             + L+E+    F G LN+L+NNA I   +  + +  ++   V  TN ++VF LS+ +  
Sbjct: 91  AVDALVESTLKEF-GALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLR 149
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P+ KA G G IV I+SV G  G P    Y A K  +  +T+ LA E     I  N VAP 
Sbjct: 150 PMMKARG-GRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPG 208
Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
            I T M K   +     E    +  Q P+GR G P++++  VAFL  P A YITG  + V
Sbjct: 209 FIDTDMTKGLPQ-----EQQTALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGTTLHV 263
Query: 242 D 242
           +
Sbjct: 264 N 264

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score =  123 bits (309), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 80/242 (33%), Positives = 129/242 (53%), Gaps = 7/242 (2%)
Query: 2   TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
           TA+VTG +RG+G A   +L   GA IV   S     LDA   E+K  G  V  +  D+ +
Sbjct: 7   TAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKN 66
Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
            E  E +++T    F G+++IL+NNA I      + ++ +D   V +TN +S +  ++  
Sbjct: 67  PEDVENMVKTAMDAF-GRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAV 125
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
             +     +G I+ I+S+ G+ G    + Y A K  +   TK++A E+A   I  N VAP
Sbjct: 126 SKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAP 185
Query: 181 WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
            +IKT M     +  +   +L+ I    P+ R G P+EV+++V FL    ++YITGQ+I 
Sbjct: 186 GIIKTDMTDVLPDKVK-EMYLNNI----PLKRFGTPEEVANVVGFLASDDSNYITGQVIN 240
Query: 241 VD 242
           +D
Sbjct: 241 ID 242

>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271

Iteration: 1
 Score =  120 bits (300), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 80/243 (32%), Positives = 119/243 (48%), Gaps = 8/243 (3%)
Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           TALVTG +RG+G A  E LA  GA +     +   +   + E++N G        D++S 
Sbjct: 28  TALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSE 87
Query: 62  EQREKLIETVTSIF-QG-KLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
            +   +IE    +  QG  ++IL+NNA I F KP +++   D   V  TN  S F + + 
Sbjct: 88  SE---IIEAFARLDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGRE 144
Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
           A       G G IV I S+       +V+ Y   KG +  LT+ +A EWA+  I+ N + 
Sbjct: 145 AAKRMIPRGYGKIVNIGSLTSELARATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIG 204
Query: 180 PWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
           P  + T M +   + P   EF   +  +TP  R G+P E+     FL   A+ Y+ GQII
Sbjct: 205 PGYMLTDMNQALIDNP---EFDAWVKARTPAKRWGKPQELVGTAVFLSASASDYVNGQII 261
Query: 240 CVD 242
            VD
Sbjct: 262 YVD 264

>pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa High-throughput Crystallographic Studies For Assessment Of Potential Targets In Early Stage Drug Discovery. Length = 242

Iteration: 1
 Score =  119 bits (299), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/239 (33%), Positives = 122/239 (51%), Gaps = 17/239 (7%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQ 63
           LVTGG+ GIG A   + A  GA V     +   + A  H       ++     D++  ++
Sbjct: 15  LVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRHP------RIRREELDITDSQR 68
Query: 64  REKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPL 123
            ++L E +      +L++L+NNA I+  +   D+       V   N  +    SQLA PL
Sbjct: 69  LQRLFEALP-----RLDVLVNNAGISRDREEYDLAT--FERVLRLNLSAAMLASQLARPL 121
Query: 124 FKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVI 183
               G GSI+ I+S+    G      Y A KGA+ QLT++LACE+A + IR N +AP  I
Sbjct: 122 LAQRG-GSILNIASMYSTFGSADRPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWI 180
Query: 184 KTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 242
            T +    +   E +     I ++TP+ R GE  EV+S  AFLC P AS++TG ++ VD
Sbjct: 181 DTPLGAGLKADVEATRR---IMQRTPLARWGEAPEVASAAAFLCGPGASFVTGAVLAVD 236

>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291

Iteration: 1
 Score =  119 bits (298), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 121/243 (49%), Gaps = 4/243 (1%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           ALVTG + GIG A     A+ GA +     NQ  +D  +  +K  G    G VCD++  +
Sbjct: 37  ALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYVCDVTDED 96
Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
             + ++  + S   G ++IL+NNA I    P +++TA     V   +  + F +S+   P
Sbjct: 97  GIQAMVAQIESEV-GIIDILVNNAGIIRRVPMIEMTAAQFRQVIDIDLNAPFIVSKAVIP 155
Query: 123 LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWV 182
                G+G I+ I S+    G  +VS Y A KG +  LTKN+A E+ + NI+ N + P  
Sbjct: 156 SMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGY 215
Query: 183 IKTSMIKPFEE-GPEGSE--FLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
           I T    P  E   +GS   F   I  +TP  R GE +++     FL   A++++ G I+
Sbjct: 216 IATPQTAPLRELQKDGSRHPFDQFIIAKTPAARWGEAEDLMGPAVFLASDASNFVNGHIL 275
Query: 240 CVD 242
            VD
Sbjct: 276 YVD 278

>pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus Thermophilus Hb8 Length = 239

Iteration: 1
 Score =  117 bits (294), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 82/248 (33%), Positives = 123/248 (49%), Gaps = 27/248 (10%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSV---CDLS 59
           ALVTGG+RGIG A  E L   G  V   SRN  E    L           G+V    DL 
Sbjct: 5   ALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSL-----------GAVPLPTDLE 53
Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
             + +  +   + ++  G L++L++ AA+   KP ++++ E+   V   + +  F L+Q 
Sbjct: 54  KDDPKGLVKRALEAL--GGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQA 111
Query: 120 AHPLFKASGNGSIVFISSV-----GGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIR 174
           A P    +G G ++FI SV     GG   IP+   Y   K A+  LT+ LA EWA+  IR
Sbjct: 112 AAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPA---YTTAKTALLGLTRALAKEWARLGIR 168
Query: 175 TNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYI 234
            N + P  ++T    P  + PE     + I  + P+GR   P+E++ + A LC   A Y+
Sbjct: 169 VNLLCPGYVETEFTLPLRQNPE---LYEPITARIPMGRWARPEEIARVAAVLCGDEAEYL 225
Query: 235 TGQIICVD 242
           TGQ + VD
Sbjct: 226 TGQAVAVD 233

>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255

Iteration: 1
 Score =  117 bits (293), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 86/245 (35%), Positives = 117/245 (47%), Gaps = 11/245 (4%)
Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           TALVTG  RG+G A  E LA  GA V         L   +     KG+   G   D++  
Sbjct: 11  TALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTD- 69
Query: 62  EQREKLIETVTSIFQGK---LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQ 118
              E  IE   S    +   ++ILINNA I + KP V++  E+   V  TN  S F +S+
Sbjct: 70  ---ELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSR 126
Query: 119 -LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
             A  +   +  G I+ I S+      P+V+ Y A KG +  LT ++A EWA+ NI+TN 
Sbjct: 127 SAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNA 186
Query: 178 VAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ 237
           + P  I T M        E  +F   +   TP  R G P+E+     FL   A+ YI GQ
Sbjct: 187 IGPGYILTDMNTAL---IEDKQFDSWVKSSTPSQRWGRPEELIGTAIFLSSKASDYINGQ 243
Query: 238 IICVD 242
           II VD
Sbjct: 244 IIYVD 248

>pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid Dehydrogenase From Brucella Melitensis Length = 256

Iteration: 1
 Score =  117 bits (293), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 68/197 (34%), Positives = 106/197 (53%), Gaps = 6/197 (3%)
Query: 45  KNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMST 104
           +  G K  G  C+++  + RE +I+     F GK+ +L+NNA     KP  D+   D   
Sbjct: 57  RQAGGKAIGLECNVTDEQHREAVIKAALDQF-GKITVLVNNAGGGGPKP-FDMPMSDFEW 114
Query: 105 VSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNL 164
               N  S+F LSQLA P  + +G G+I+ ISS+ G      ++ YG+ K A+N LT+N+
Sbjct: 115 AFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNI 174
Query: 165 ACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVA 224
           A +     IR N +AP  IKT  +          E    + + TP+GR GE  ++++   
Sbjct: 175 AFDVGPMGIRVNAIAPGAIKTDALATVLT----PEIERAMLKHTPLGRLGEAQDIANAAL 230
Query: 225 FLCLPAASYITGQIICV 241
           FLC PAA++I+GQ++ V
Sbjct: 231 FLCSPAAAWISGQVLTV 247

>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262

Iteration: 1
 Score =  115 bits (288), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/241 (33%), Positives = 113/241 (46%), Gaps = 8/241 (3%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF-KVTGSVCDLSSRE 62
           +VTGGT+GIG       AR GA V    R+  ++DA + +    G  KV G   D+S R 
Sbjct: 14  VVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRA 73
Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
           Q + L       F G ++++  NA +    P   +T E ++ + + N    F+  Q    
Sbjct: 74  QCDALAGRAVEEF-GGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLD 132
Query: 123 LFKASGNGSIVFISSVGG-VRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
              ASG+G +V  SS+ G + G P  S YGA K A     +  A E A   I  N + P 
Sbjct: 133 ALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPG 192
Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
            I T  +        G E++  +AR  P G  G P+++  L AFL    A YITGQ I V
Sbjct: 193 NIMTEGLLE-----NGEEYIASMARSIPAGALGTPEDIGHLAAFLATKEAGYITGQAIAV 247
Query: 242 D 242
           D
Sbjct: 248 D 248

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score =  114 bits (284), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 82/240 (34%), Positives = 120/240 (50%), Gaps = 9/240 (3%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           ALVTG +RGIG A  E LA  GA V   + ++    A      + G    G   ++++ E
Sbjct: 15  ALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNG---KGMALNVTNPE 71
Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
             E +++ +T  F G ++IL+NNAAI      + +  E+ S +  TN  S+F LS+    
Sbjct: 72  SIEAVLKAITDEF-GGVDILVNNAAITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLR 130
Query: 123 LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWV 182
                  G I+ + SV G  G    + Y A K  +   TK++A E A   +  NTVAP  
Sbjct: 131 GMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGF 190
Query: 183 IKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 242
           I+T M K   +     E       Q P GR G+P E++S VAFL  P A+YITG+ + V+
Sbjct: 191 IETDMTKALND-----EQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETLHVN 245

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score =  114 bits (284), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 87/241 (36%), Positives = 116/241 (48%), Gaps = 7/241 (2%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSSR 61
           +LVTG TRGIG A  E+LA  G+ V     +     A   E  NK G K  G   +L S 
Sbjct: 10  SLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSE 69
Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           E   K  E + ++  G ++IL+NNA I   K  + ++  D   V   N    F ++Q + 
Sbjct: 70  ESINKAFEEIYNLVDG-IDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSL 128
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
                   G IV ISSV G  G      Y   K  +   TK+LA E A  N+  N VAP 
Sbjct: 129 RKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPG 188
Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
            I+T M     E     E       Q P+GR G P+EV+++V FLC   ASYITG++I V
Sbjct: 189 FIETDMTAVLSE-----EIKQKYKEQIPLGRFGSPEEVANVVLFLCSELASYITGEVIHV 243
Query: 242 D 242
           +
Sbjct: 244 N 244

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score =  112 bits (281), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/240 (33%), Positives = 119/240 (49%), Gaps = 9/240 (3%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           ALVTG +RGIG A  E LA  GA V   + ++    A      + G    G   ++++ E
Sbjct: 15  ALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNG---KGMALNVTNPE 71
Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
             E +++ +T  F G ++IL+NNA I      + +  E+ S +  TN  S+F LS+    
Sbjct: 72  SIEAVLKAITDEF-GGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLR 130
Query: 123 LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWV 182
                  G I+ + SV G  G    + Y A K  +   TK++A E A   +  NTVAP  
Sbjct: 131 GMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGA 190
Query: 183 IKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 242
           I+T M K   +     E       Q P GR G+P E++S VAFL  P A+YITG+ + V+
Sbjct: 191 IETDMTKALND-----EQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETLHVN 245

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score =  112 bits (281), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/250 (32%), Positives = 116/250 (46%), Gaps = 15/250 (6%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           ALVTG T GIG      L + G  V  C+R +  L   L E +  G +  G  CD+ S  
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 88
Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
           + E L+  V   + G +++L+NNA       T ++  E    V  TN   VF +++    
Sbjct: 89  EIEALVAAVVERY-GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTK---Q 144
Query: 123 LFKAS-----GNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
           + KA      G G IV I+S GG +G+   + Y A K  +   TK L  E A+  I  N 
Sbjct: 145 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNA 204
Query: 178 VAPWVIKTSMIKPFEEGPEG------SEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAA 231
           V P  ++T M     E           E  D I  + PIGR  +P EV+ +VA+L  P A
Sbjct: 205 VCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGA 264
Query: 232 SYITGQIICV 241
           + +T Q + V
Sbjct: 265 AAVTAQALNV 274

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score =  112 bits (281), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/250 (32%), Positives = 116/250 (46%), Gaps = 15/250 (6%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           ALVTG T GIG      L + G  V  C+R +  L   L E +  G +  G  CD+ S  
Sbjct: 25  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 84
Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
           + E L+  V   + G +++L+NNA       T ++  E    V  TN   VF +++    
Sbjct: 85  EIEALVAAVVERY-GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTK---Q 140
Query: 123 LFKAS-----GNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
           + KA      G G IV I+S GG +G+   + Y A K  +   TK L  E A+  I  N 
Sbjct: 141 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNA 200
Query: 178 VAPWVIKTSMIKPFEEGPEG------SEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAA 231
           V P  ++T M     E           E  D I  + PIGR  +P EV+ +VA+L  P A
Sbjct: 201 VCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGA 260
Query: 232 SYITGQIICV 241
           + +T Q + V
Sbjct: 261 AAVTAQALNV 270

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score =  112 bits (281), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/247 (32%), Positives = 114/247 (46%), Gaps = 9/247 (3%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           ALVTG T GIG      L + G  V  C+R +  L   L E +  G +  G  CD+ S  
Sbjct: 9   ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 68
Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQ--LA 120
           + E L+  V   + G +++L+NNA       T ++  E    V  TN   VF +++  L 
Sbjct: 69  EIEALVAAVVERY-GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLK 127
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
                  G G IV I+S GG +G+   + Y A K  +   TK L  E A+  I  N V P
Sbjct: 128 AGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCP 187
Query: 181 WVIKTSMIKPFEEGPEG------SEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYI 234
             ++T M     E           E  D I  + PIGR  +P EV+ +VA+L  P A+ +
Sbjct: 188 GFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAAAV 247
Query: 235 TGQIICV 241
           T Q + V
Sbjct: 248 TAQALNV 254

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score =  112 bits (281), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/250 (32%), Positives = 116/250 (46%), Gaps = 15/250 (6%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           ALVTG T GIG      L + G  V  C+R +  L   L E +  G +  G  CD+ S  
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 88
Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
           + E L+  V   + G +++L+NNA       T ++  E    V  TN   VF +++    
Sbjct: 89  EIEALVAAVVERY-GPVDVLVNNAGRLGGGATAELADELWLDVVETNLTGVFRVTK---Q 144
Query: 123 LFKAS-----GNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
           + KA      G G IV I+S GG +G+   + Y A K  +   TK L  E A+  I  N 
Sbjct: 145 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNA 204
Query: 178 VAPWVIKTSMIKPFEEGPEG------SEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAA 231
           V P  ++T M     E           E  D I  + PIGR  +P EV+ +VA+L  P A
Sbjct: 205 VCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGA 264
Query: 232 SYITGQIICV 241
           + +T Q + V
Sbjct: 265 AAVTAQALNV 274

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score =  112 bits (281), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/250 (32%), Positives = 116/250 (46%), Gaps = 15/250 (6%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           ALVTG T GIG      L + G  V  C+R +  L   L E +  G +  G  CD+ S  
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 88
Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
           + E L+  V   + G +++L+NNA       T ++  E    V  TN   VF +++    
Sbjct: 89  EIEALVAAVVERY-GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTK---Q 144
Query: 123 LFKAS-----GNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
           + KA      G G IV I+S GG +G+   + Y A K  +   TK L  E A+  I  N 
Sbjct: 145 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNA 204
Query: 178 VAPWVIKTSMIKPFEEG------PEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAA 231
           V P  ++T M     E           E  D I  + PIGR  +P EV+ +VA+L  P A
Sbjct: 205 VCPGFVETPMAASVREHFSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGA 264
Query: 232 SYITGQIICV 241
           + +T Q + V
Sbjct: 265 AAVTAQALNV 274

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score =  112 bits (280), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/250 (32%), Positives = 116/250 (46%), Gaps = 15/250 (6%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           ALVTG T GIG      L + G  V  C+R +  L   L E +  G +  G  CD+ S  
Sbjct: 25  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 84
Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
           + E L+  V   + G +++L+NNA       T ++  E    V  TN   VF +++    
Sbjct: 85  EIEALVAAVVERY-GPVDVLVNNAGRLGGGATAELADELWLDVVETNLTGVFRVTK---Q 140
Query: 123 LFKAS-----GNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
           + KA      G G IV I+S GG +G+   + Y A K  +   TK L  E A+  I  N 
Sbjct: 141 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNA 200
Query: 178 VAPWVIKTSMIKPFEEGPEG------SEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAA 231
           V P  ++T M     E           E  D I  + PIGR  +P EV+ +VA+L  P A
Sbjct: 201 VCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGA 260
Query: 232 SYITGQIICV 241
           + +T Q + V
Sbjct: 261 AAVTAQALNV 270

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score =  112 bits (280), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/250 (32%), Positives = 116/250 (46%), Gaps = 15/250 (6%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           ALVTG T GIG      L + G  V  C+R +  L   L E +  G +  G  CD+ S  
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 88
Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
           + E L+  V   + G +++L+NNA       T ++  E    V  TN   VF +++    
Sbjct: 89  EIEALVAAVVERY-GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTK---Q 144
Query: 123 LFKAS-----GNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
           + KA      G G IV I+S GG +G+   + Y A K  +   TK L  E A+  I  N 
Sbjct: 145 VLKAGGMLERGTGRIVNIASTGGKQGLVHAAPYSASKHGVVGFTKALGLELARTGITVNA 204
Query: 178 VAPWVIKTSMIKPFEEGPEG------SEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAA 231
           V P  ++T M     E           E  D I  + PIGR  +P EV+ +VA+L  P A
Sbjct: 205 VCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGA 264
Query: 232 SYITGQIICV 241
           + +T Q + V
Sbjct: 265 AAVTAQALNV 274

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score =  112 bits (280), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/240 (33%), Positives = 119/240 (49%), Gaps = 9/240 (3%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           ALVTG +RGIG A  E LA  GA V   + ++    A      + G    G   ++++ E
Sbjct: 15  ALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNG---KGMALNVTNPE 71
Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
             E +++ +T  F G ++IL+NNA I      + +  E+ S +  TN  S+F LS+    
Sbjct: 72  SIEAVLKAITDEF-GGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLR 130
Query: 123 LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWV 182
                  G I+ + SV G  G    + Y A K  +   TK++A E A   +  NTVAP  
Sbjct: 131 GMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGF 190
Query: 183 IKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 242
           I+T M K   +     E       Q P GR G+P E++S VAFL  P A+YITG+ + V+
Sbjct: 191 IETDMTKALND-----EQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETLHVN 245

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score =  112 bits (279), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 81/240 (33%), Positives = 119/240 (49%), Gaps = 9/240 (3%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           ALVTG +RGIG A  E LA  GA V   + ++    A      + G    G   ++++ E
Sbjct: 15  ALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNG---KGMALNVTNPE 71
Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
             E +++ +T  F G ++IL+NNA I      + +  E+ S +  TN  S+F LS+    
Sbjct: 72  SIEAVLKAITDEF-GGVDILVNNADITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLR 130
Query: 123 LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWV 182
                  G I+ + SV G  G    + Y A K  +   TK++A E A   +  NTVAP  
Sbjct: 131 GMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGF 190
Query: 183 IKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 242
           I+T M K   +     E       Q P GR G+P E++S VAFL  P A+YITG+ + V+
Sbjct: 191 IETDMTKALND-----EQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETLHVN 245

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score =  111 bits (278), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 81/250 (32%), Positives = 116/250 (46%), Gaps = 15/250 (6%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           ALVTG T GIG      L + G  V  C+R +  L   L E +  G +  G  CD+ S  
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 88
Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
           + E L+  V   + G +++L+NNA       T ++  E    V  TN   VF +++    
Sbjct: 89  EIEALVAAVVERY-GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTK---Q 144
Query: 123 LFKAS-----GNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
           + KA      G G IV I+S GG +G+   + Y A K  +   TK L  E A+  I  N 
Sbjct: 145 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNA 204
Query: 178 VAPWVIKTSMIKPFEEGPEG------SEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAA 231
           V P  ++T M     E           E  D I  + PIGR  +P EV+ +VA+L  P A
Sbjct: 205 VCPGWVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGA 264
Query: 232 SYITGQIICV 241
           + +T Q + V
Sbjct: 265 AAVTAQALNV 274

>pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8 Length = 256

Iteration: 1
 Score =  111 bits (277), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 81/242 (33%), Positives = 118/242 (48%), Gaps = 12/242 (4%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSV--CDLSSR 61
           LVTGG RGIG A  +  AR GA+V  C       D R  E K     + G+    DL   
Sbjct: 10  LVTGGARGIGRAIAQAFAREGALVALC-------DLR-PEGKEVAEAIGGAFFQVDLEDE 61
Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
            +R + +E       G++++L+NNAAIA     + +   +   V   N  +  HLS LA 
Sbjct: 62  RERVRFVEEAAYAL-GRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAA 120
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
              +  G G+IV ++SV G+      + Y A KG +  LT++LA + A   IR N VAP 
Sbjct: 121 REMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPG 180
Query: 182 VIKT-SMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
            I T ++++     P+             + R G+P+EV+  V FL    AS+ITG I+ 
Sbjct: 181 AIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFITGAILP 240
Query: 241 VD 242
           VD
Sbjct: 241 VD 242

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score =  110 bits (276), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 119/240 (49%), Gaps = 9/240 (3%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           ALVTG +RGIG A  E LA  GA V   + ++    A      + G    G   ++++ E
Sbjct: 15  ALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNG---KGMALNVTNPE 71
Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
             E +++ +T  F G ++IL+NNA I      + +  E+ S +  TN  S+F LS+    
Sbjct: 72  SIEAVLKAITDEF-GGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLR 130
Query: 123 LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWV 182
                  G I+ + SV G  G    + + A K  +   TK++A E A   +  NTVAP  
Sbjct: 131 GMMKKRQGRIINVGSVVGTMGNAGQANFAAAKAGVIGFTKSMAREVASRGVTVNTVAPGF 190
Query: 183 IKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 242
           I+T M K   +     E       Q P GR G+P E++S VAFL  P A+YITG+ + V+
Sbjct: 191 IETDMTKALND-----EQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETLHVN 245

>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181 Length = 260

Iteration: 1
 Score =  110 bits (275), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 81/247 (32%), Positives = 122/247 (49%), Gaps = 15/247 (6%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           A+VTGG + IG A V  LA  GA V     ++      + + + +G  V+  V D+++ E
Sbjct: 16  AIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTE 75
Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVS-----STNFESVFHLS 117
             +  + +V    +G+++IL+  A I       ++ AEDM+          N   +F   
Sbjct: 76  SVQNAVRSVHE-QEGRVDILVACAGICIS----EVKAEDMTDGQWLKQVDINLNGMFRSC 130
Query: 118 QLAHPLFKASGNGSIVFISSVGG--VRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
           Q    +      G IV I S+ G  V      + Y A K  ++Q  ++LA EWA   IR 
Sbjct: 131 QAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRA 190
Query: 176 NTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT 235
           N VAP  I+T++ +   E PE     D     TP+GR G+PDEV+S+V FL   AAS +T
Sbjct: 191 NAVAPTYIETTLTRFGMEKPE---LYDAWIAGTPMGRVGQPDEVASVVQFLASDAASLMT 247
Query: 236 GQIICVD 242
           G I+ VD
Sbjct: 248 GAIVNVD 254

>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 269

Iteration: 1
 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 123/243 (50%), Gaps = 10/243 (4%)
Query: 3   ALVTGGTRGIGHATVEELARFG---AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLS 59
           A VTGG  G+G A    L   G   A+ H+  RN       +HE ++ G        D++
Sbjct: 28  AFVTGGMGGLGAAISRRLHDAGMAVAVSHS-ERNDHVSTWLMHE-RDAGRDFKAYAVDVA 85
Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
             E  E+  E V + F GK+++LINNA I      + +T  D   V  T+ +++F++++ 
Sbjct: 86  DFESCERCAEKVLADF-GKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQ 144
Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
                     G IV I SV G RG    + Y + K  ++  TK LA E AK  I  NTV+
Sbjct: 145 FIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLALETAKRGITVNTVS 204
Query: 180 PWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
           P  + T+M++   +    ++ L     Q P+GR G PDEV++L+AFLC   A ++TG  +
Sbjct: 205 PGYLATAMVEAVPQDVLEAKILP----QIPVGRLGRPDEVAALIAFLCSDDAGFVTGADL 260
Query: 240 CVD 242
            ++
Sbjct: 261 AIN 263

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score =  109 bits (273), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 120/240 (50%), Gaps = 6/240 (2%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           ALVTG  RGIG    + LA+  + V   SR Q   D+ + E K+ G++ +G   D+S +E
Sbjct: 47  ALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKE 106
Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
           +  ++I  + +  +  ++IL+NNA I      + +  ++   V  TN  S+F+++Q    
Sbjct: 107 EISEVINKILTEHK-NVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISK 165
Query: 123 LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWV 182
               +  G I+ ISS+ G+ G    + Y + K  +   TK+LA E A  NI  N +AP  
Sbjct: 166 RMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGF 225
Query: 183 IKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 242
           I + M     E     +    I    P GR G P+EV++L  FL    + YI G++  +D
Sbjct: 226 ISSDMTDKISE-----QIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGYINGRVFVID 280

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score =  108 bits (271), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 112/244 (45%), Gaps = 10/244 (4%)
Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF-KVTGSVCDLSS 60
           + LVTGGT+GIG       AR GA V   +R+  EL +   E    G   V G   D+S 
Sbjct: 43  SVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSD 102
Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD-ITAEDMSTVSSTNFESVFHLSQL 119
                    TV   F G L+++  NA I F +  +D +T E +S V   N +   +  Q 
Sbjct: 103 PGSCADAARTVVDAF-GALDVVCANAGI-FPEARLDTMTPEQLSEVLDVNVKGTVYTVQA 160
Query: 120 AHPLFKASGNGSIVFISSV-GGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
                 ASG G ++  SS+ G V G P  S YGA K A     +  A E A   +  N +
Sbjct: 161 CLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAI 220
Query: 179 APWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI 238
            P  I T  +        G E++ G+AR  P+G  G P ++  L AFL    A YITGQ 
Sbjct: 221 LPGNILTEGLVDM-----GEEYISGMARSIPMGMLGSPVDIGHLAAFLATDEAGYITGQA 275
Query: 239 ICVD 242
           I VD
Sbjct: 276 IVVD 279

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score =  108 bits (270), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 80/244 (32%), Positives = 124/244 (50%), Gaps = 11/244 (4%)
Query: 2   TALVTGGTRGIGHATVEELARFG---AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDL 58
           +ALVTG +RGIG +   +LA  G   A+ +  S+ + E  A + E K KG        ++
Sbjct: 12  SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAE--AVVEEIKAKGVDSFAIQANV 69
Query: 59  SSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQ 118
           +  ++ + +I+ V S F G L++L+NNA I      + +  ++   V  TN + VF+  Q
Sbjct: 70  ADADEVKAMIKEVVSQF-GSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQ 128
Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
            A P      +G+I+ +SSV G  G P  + Y A K  +  LTK+ A E A   I  N V
Sbjct: 129 KATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAV 188
Query: 179 APWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI 238
           AP  I + M     +     E  + +  Q P+ R G+  ++++ VAFL    A YITGQ 
Sbjct: 189 APGFIVSDMTDALSD-----ELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQT 243
Query: 239 ICVD 242
           I V+
Sbjct: 244 IHVN 247

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score =  108 bits (269), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 121/241 (50%), Gaps = 7/241 (2%)
Query: 3   ALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           ALVTG +RGIG A   +LA+ GA +V   + N+ + +  + E K  G        D+++ 
Sbjct: 7   ALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANA 66
Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           E    +++    +F G+++IL+NNA +      + +  E+  TV +TN + VF  ++   
Sbjct: 67  EDVTNMVKQTVDVF-GQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVS 125
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
                  +G IV I+SV GV G P  + Y A K  +  LTK  A E A  NI  N +AP 
Sbjct: 126 RFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPG 185
Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
            I T M    +E  + +E L    +  P  + GE  ++++ V F     + YITGQ + V
Sbjct: 186 FIATDMTDVLDENIK-AEML----KLIPAAQFGEAQDIANAVTFFASDQSKYITGQTLNV 240
Query: 242 D 242
           D
Sbjct: 241 D 241

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score =  107 bits (267), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 115/240 (47%), Gaps = 5/240 (2%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQ 63
           +VTGG  GIG AT E  A+ GA V     N+   DA +      G K  G   D+SS + 
Sbjct: 31  IVTGGGSGIGRATAELFAKNGAYVVVADVNE---DAAVRVANEIGSKAFGVRVDVSSAKD 87
Query: 64  REKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPL 123
            E  +E  T+ + G++++L+NNA        V I  E    + S N + +F  S+   P+
Sbjct: 88  AESXVEKTTAKW-GRVDVLVNNAGFGTTGNVVTIPEETWDRIXSVNVKGIFLCSKYVIPV 146
Query: 124 FKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVI 183
            + +G GSI+  +S      I   + Y A KGA++ LT+  A + AK+ IR N VAP  I
Sbjct: 147 XRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSLTRAXAXDHAKEGIRVNAVAPGTI 206
Query: 184 KTSMI-KPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 242
            +    K F E  + ++       +    R G  +E++    FL    + + TG I+ VD
Sbjct: 207 DSPYFTKIFAEAKDPAKLRSDFNARAVXDRXGTAEEIAEAXLFLASDRSRFATGSILTVD 266

>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271

Iteration: 1
 Score =  107 bits (267), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 80/242 (33%), Positives = 118/242 (48%), Gaps = 11/242 (4%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIEL-DARLHEWKNKGFKVTGSVCDLSSRE 62
           L+TG ++GIG    + LA  G  V    R+  E+ DA  +E + KG+K      D +S  
Sbjct: 33  LITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASES 92
Query: 63  QREKLIETVTSIFQ--GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
                IE + +I Q  G L+ L+NNA +   K  + +  ED   V   N  S F   + A
Sbjct: 93  D---FIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREA 149
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
             +   S  GS+V ++S+ G RG    + Y A KG M  ++K+ A E A  NIR N+V P
Sbjct: 150 LKVMSKSRFGSVVNVASIIGERGNMGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTP 209
Query: 181 WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
             I+T M    ++     E      +  P+ R G   EV+  VAFL    +SYITG+ + 
Sbjct: 210 GFIETDMNANLKD-----ELKADYVKNIPLNRLGSAKEVAEAVAFLLSDHSSYITGETLK 264
Query: 241 VD 242
           V+
Sbjct: 265 VN 266

>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276

Iteration: 1
 Score =  107 bits (267), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 120/243 (49%), Gaps = 10/243 (4%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           AL+TG + GIG       A  GA V   +R+   L     E    G K     CD++  +
Sbjct: 35  ALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPD 94
Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
           Q   +++ +T    G ++I + NA I  V+  +D+  E+   +  TN   VF  +Q A  
Sbjct: 95  QVRGMLDQMTGEL-GGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAAR 153
Query: 123 LFKASG-NGSIVFISSVGG-VRGIPS-VSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
                G  G+I+  +S+ G +  IP  VS Y   K A+  LTK +A E A   IR N+V+
Sbjct: 154 AMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVS 213
Query: 180 PWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
           P  I+T +++P       +++      + P+GR G P+E++ L  +L   A+SY+TG  I
Sbjct: 214 PGYIRTELVEPL------ADYHALWEPKIPLGRMGRPEELTGLYLYLASAASSYMTGSDI 267
Query: 240 CVD 242
            +D
Sbjct: 268 VID 270

>pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein] Reductase Ttha0415 From Thermus Thermophilus Length = 245

Iteration: 1
 Score =  107 bits (267), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 81/242 (33%), Positives = 118/242 (48%), Gaps = 8/242 (3%)
Query: 3   ALVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHEWKNKGFKVTGSV-CDLSS 60
           AL+TG +RGIG A    LA  G A+     +N+ + +    E + +G  +   +  +L  
Sbjct: 4   ALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLE 63
Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
            E    L+     +  G L+ L+NNA I      V +  ED   V   N  +VF  ++ A
Sbjct: 64  AEAATALVHQAAEVL-GGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREA 122
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
             L   +  G IV I+SV G+ G P  + Y A K  +   T+ +A E+A+  I  N VAP
Sbjct: 123 VKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAP 182
Query: 181 WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
             I+T M +   +     E  +   +Q P GR G P+EV+  VAFL    A YITGQ +C
Sbjct: 183 GFIETEMTERLPQ-----EVKEAYLKQIPAGRFGRPEEVAEAVAFLVSEKAGYITGQTLC 237
Query: 241 VD 242
           VD
Sbjct: 238 VD 239

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score =  107 bits (266), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 115/240 (47%), Gaps = 9/240 (3%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           ALVTG +RGIG A  E LA  GA V   + ++    A      + G    G   ++++ E
Sbjct: 12  ALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNG---KGXALNVTNPE 68
Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
             E +++ +T  F G ++IL+NNA I           E+ S +  TN  S+F LS+    
Sbjct: 69  SIEAVLKAITDEF-GGVDILVNNAGITRDNLLXRXKEEEWSDIXETNLTSIFRLSKAVLR 127
Query: 123 LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWV 182
                  G I+ + SV G  G    + Y A K  +   TK+ A E A   +  NTVAP  
Sbjct: 128 GXXKKRQGRIINVGSVVGTXGNAGQANYAAAKAGVIGFTKSXAREVASRGVTVNTVAPGF 187
Query: 183 IKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 242
           I+T   K   +     E       Q P GR G+P E++S VAFL  P A+YITG+ + V+
Sbjct: 188 IETDXTKALND-----EQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETLHVN 242

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 118/239 (49%), Gaps = 6/239 (2%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           A++TG   GIG       A  GA V     N    +  + E +  G +     CD++S +
Sbjct: 14  AIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQ 73
Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
           +   L +   S   GK++IL+NNA     KP  D+   D       N  S FHLSQL  P
Sbjct: 74  ELSALADFAISKL-GKVDILVNNAGGGGPKP-FDMPMADFRRAYELNVFSFFHLSQLVAP 131
Query: 123 LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWV 182
             + +G G I+ I+S+       +++ Y + K A + L +N+A +  + NIR N +AP  
Sbjct: 132 EMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGA 191
Query: 183 IKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
           I T  +K         E    + + TPI R G+P ++++   FLC PAAS+++GQI+ V
Sbjct: 192 ILTDALKSVIT----PEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQILTV 246

>pdb|3D3W|A Chain A, Structure Of L-Xylulose Reductase With Bound Coenzyme, Phosphate And Hydroxide Length = 244

Iteration: 1
 Score =  105 bits (261), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 121/241 (50%), Gaps = 15/241 (6%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVC-DLSSRE 62
           LVTG  +GIG  TV+ L   GA V   SR Q +LD+ + E           VC DL   E
Sbjct: 11  LVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG-----IEPVCVDLGDWE 65
Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL-AH 121
             E+ + +V     G +++L+NNAA+A ++P +++T E        N  +V  +SQ+ A 
Sbjct: 66  ATERALGSV-----GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVAR 120
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
            L      G+IV +SS    R + + S+Y + KGA++ LTK +A E     IR N V P 
Sbjct: 121 GLIARGVPGAIVNVSSQXSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPT 180
Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
           V+ TSM +     P  ++ +     + P+G+  E + V + + FL    +   TG  + V
Sbjct: 181 VVMTSMGQATWSDPHKAKTM---LNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGSTLPV 237
Query: 242 D 242
           +
Sbjct: 238 E 238

>pdb|2WDZ|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter Sphaeroides In Complex With Nad+ And 1,2-Pentandiol Length = 254

Iteration: 1
 Score =  104 bits (260), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 82/244 (33%), Positives = 113/244 (46%), Gaps = 13/244 (5%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSSR 61
           A VTG   GIG       A  GA +    R    LD    E       ++   V D  + 
Sbjct: 14  AAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAM 73
Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
                  E V  +     +IL+N+A IA +   ++        V + N + +F  S+   
Sbjct: 74  TAAAAEAEAVAPV-----SILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFG 128
Query: 122 PLFKASGNGSIVFISSVGG--VRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
               A G G+IV + S+ G  V      S Y A KGA++QLT+ LA EWA   +R N +A
Sbjct: 129 RAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALA 188
Query: 180 PWVIKTSMIKPFEEGPEGSE-FLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI 238
           P  + T M     E PE  E +LD     TP+GR GEP E+++   FL  PAASY+TG I
Sbjct: 189 PGYVATEMTLKMRERPELFETWLD----MTPMGRCGEPSEIAAAALFLASPAASYVTGAI 244
Query: 239 ICVD 242
           + VD
Sbjct: 245 LAVD 248

>pdb|1PR9|A Chain A, Human L-Xylulose Reductase Holoenzyme Length = 244

Iteration: 1
 Score =  104 bits (259), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 121/241 (50%), Gaps = 15/241 (6%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVC-DLSSRE 62
           LVTG  +GIG  TV+ L   GA V   SR Q +LD+ + E           VC DL   E
Sbjct: 11  LVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG-----IEPVCVDLGDWE 65
Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL-AH 121
             E+ + +V     G +++L+NNAA+A ++P +++T E        N  +V  +SQ+ A 
Sbjct: 66  ATERALGSV-----GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVAR 120
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
            L      G+IV +SS    R + + S+Y + KGA++ LTK +A E     IR N V P 
Sbjct: 121 GLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPT 180
Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
           V+ TSM +     P  ++ +     + P+G+  E + V + + FL    +   TG  + V
Sbjct: 181 VVMTSMGQATWSDPHKAKTM---LNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGSTLPV 237
Query: 242 D 242
           +
Sbjct: 238 E 238

>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253

Iteration: 1
 Score =  103 bits (258), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 75/241 (31%), Positives = 112/241 (46%), Gaps = 17/241 (7%)
Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           + LVTGG RGIG A     A  G        +++ +  R  E       V    CD++  
Sbjct: 23  SVLVTGGNRGIGLAIARAFADAG--------DKVAITYRSGEPPEGFLAVK---CDITDT 71
Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           EQ E+  + +     G + +LI NA +   +  + ++ ED ++V  TN    F + + A+
Sbjct: 72  EQVEQAYKEIEET-HGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRAN 130
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
                +  G +V ISSV G+ G    + Y A K  +    ++LA E    NI  N VAP 
Sbjct: 131 RAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLARELGSRNITFNVVAPG 190
Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
            + T M K   +     E    I  Q P+GR   P+E+++ V FL    ASYITG +I V
Sbjct: 191 FVDTDMTKVLTD-----EQRANIVSQVPLGRYARPEEIAATVRFLASDDASYITGAVIPV 245
Query: 242 D 242
           D
Sbjct: 246 D 246

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score =  103 bits (258), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 82/242 (33%), Positives = 118/242 (48%), Gaps = 13/242 (5%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIV--HTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
           ALVTG +RGIG A  E LA  GA V     S N  +  +       KG  +  +V D +S
Sbjct: 8   ALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML--NVTDPAS 65
Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
            E    ++E + + F G+++IL+NNA I      + +  E+ + +  TN  SVF LS+  
Sbjct: 66  IES---VLEKIRAEF-GEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAV 121
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
                   +G I+ I SV G  G    + Y A K  +   +K+LA E A   I  N VAP
Sbjct: 122 MRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAP 181
Query: 181 WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
             I+T M +   +         GI  Q P GR G   E+++ VAFL    A+YITG+ + 
Sbjct: 182 GFIETDMTRALSDDQRA-----GILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETLH 236
Query: 241 VD 242
           V+
Sbjct: 237 VN 238

>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269

Iteration: 1
 Score =  103 bits (257), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 78/240 (32%), Positives = 113/240 (47%), Gaps = 6/240 (2%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           ALVTG +RGIG A   EL R GA+V   + +    +      K  G +  G V D+SS E
Sbjct: 30  ALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEGAGLVLDVSSDE 89
Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
                +E +     G+  I++NNA I      V +  ++   V +TN  S++ LS+    
Sbjct: 90  SVAATLEHIQQHL-GQPLIVVNNAGITRDNLLVRMKDDEWFDVVNTNLNSLYRLSKAVLR 148
Query: 123 LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWV 182
               +  G I+ I SV G  G    + Y A K  +   T+ LA E     I  N VAP  
Sbjct: 149 GMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAITVNAVAPGF 208
Query: 183 IKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 242
           I T M +   E     E L G   Q P+GR G+ +E++ +V FL    A+Y+TG  + V+
Sbjct: 209 IDTDMTRELPEAQR--EALLG---QIPLGRLGQAEEIAKVVGFLASDGAAYVTGATVPVN 263

>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249

Iteration: 1
 Score =  103 bits (256), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 120/241 (49%), Gaps = 13/241 (5%)
Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           T+L+TG + GIG A    L + G+ V     N+ +L +  +  K+     T  VC+L+++
Sbjct: 16  TSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDN---YTIEVCNLANK 72
Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           E+   LI   ++     L+IL+ NA I      + +  +D   V   N ++ F L++ A 
Sbjct: 73  EECSNLISKTSN-----LDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAI 127
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
                   G I+ ISS+ G+ G P  + Y A K  +  +TK+L+ E A   I  N VAP 
Sbjct: 128 KKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPG 187
Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
            IK+ M     E        + I ++ P+G  G P++V+  VAFL    ASYITGQ + V
Sbjct: 188 FIKSDMTDKLNEKQR-----EAIVQKIPLGTYGIPEDVAYAVAFLASNNASYITGQTLHV 242
Query: 242 D 242
           +
Sbjct: 243 N 243

>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267

Iteration: 1
 Score =  103 bits (256), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/250 (32%), Positives = 119/250 (47%), Gaps = 17/250 (6%)
Query: 4   LVTGGTRGIGHATVEELARFGA---IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
           L+TGG  G+G AT   LA  GA   +V   S       A + E      +V  +V D+S 
Sbjct: 17  LITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDA-EVLTTVADVSD 75
Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVK-PTVDITAEDMSTVSSTNFESVFHLSQL 119
             Q E  +   T  F G+++   NNA I   + PT   TA +   V S N   VF   + 
Sbjct: 76  EAQVEAYVTATTERF-GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEK 134
Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
              + +  G+G +V  +SVGG+RGI + S Y A K  +  LT+N A E+ +  IR N +A
Sbjct: 135 VLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIA 194
Query: 180 PWVIKTSMIK-------PFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAAS 232
           P  I T M++       P        EF+    +  P  R GE  E++++VAFL    AS
Sbjct: 195 PGAIWTPMVENSMKQLDPENPRKAAEEFI----QVNPSKRYGEAPEIAAVVAFLLSDDAS 250
Query: 233 YITGQIICVD 242
           Y+   ++ +D
Sbjct: 251 YVNATVVPID 260

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/248 (31%), Positives = 118/248 (47%), Gaps = 9/248 (3%)
Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           TA VTG + GIG A    LA  G  V+ C+R+   + A +   +  G  V GS CD++S 
Sbjct: 26  TAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTST 85
Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQ--L 119
           ++    +      F G + IL+N+A       T D+     + V  TN   VF +++  L
Sbjct: 86  DEVHAAVAAAVERF-GPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVL 144
Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
                + +G G IV I+S GG +G+   + Y A K  +   TK++  E AK  I  N V 
Sbjct: 145 RAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVC 204
Query: 180 PWVIKTSMIKPFEEGPEG------SEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASY 233
           P  ++T M +   EG          E  +    + P+GR   P+EV+ LV +L   AA+ 
Sbjct: 205 PGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAGLVGYLVTDAAAS 264
Query: 234 ITGQIICV 241
           IT Q + V
Sbjct: 265 ITAQALNV 272

>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249

Iteration: 1
 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/244 (33%), Positives = 123/244 (50%), Gaps = 17/244 (6%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIV--HTCSRNQI-ELDARLHEWKNKGFKVTGSVCDLS 59
           ALVTG T G+G A    L   GAIV  H     ++ EL A L E      ++     +LS
Sbjct: 13  ALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELGE------RIFVFPANLS 66
Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLS-Q 118
            RE  + L +       G ++IL+NNA I      V ++ ED   V + N  SVF+L+ +
Sbjct: 67  DREAVKALGQKAEEEM-GGVDILVNNAGITRDGLFVRMSDEDWDAVLTVNLTSVFNLTRE 125
Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
           L HP+ +   NG I+ I+S+ GV G P  + Y A K  +   +K+LA E A  N+  N +
Sbjct: 126 LTHPMMRRR-NGRIINITSIVGVTGNPGQANYCASKAGLIGFSKSLAQEIASRNVTVNCI 184
Query: 179 APWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI 238
           AP  I+++M     E  +     D I    P+ R G   ++++ V +L    A+Y+TGQ 
Sbjct: 185 APGFIESAMTGKLNEKQK-----DAIMGNIPMKRMGVGADIAAAVVYLASDEAAYVTGQT 239
Query: 239 ICVD 242
           + V+
Sbjct: 240 LHVN 243

>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246

Iteration: 1
 Score =  102 bits (254), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/244 (33%), Positives = 123/244 (50%), Gaps = 17/244 (6%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIV--HTCSRNQI-ELDARLHEWKNKGFKVTGSVCDLS 59
           ALVTG T G+G A    L   GAIV  H     ++ EL A L E      ++     +LS
Sbjct: 10  ALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELGE------RIFVFPANLS 63
Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLS-Q 118
            RE  + L +       G ++IL+NNA I      V ++ ED   V + N  SVF+L+ +
Sbjct: 64  DREAVKALGQKAEEEM-GGVDILVNNAGITRDGLFVRMSDEDWDAVLTVNLTSVFNLTRE 122
Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
           L HP+ +   NG I+ I+S+ GV G P  + Y A K  +   +K+LA E A  N+  N +
Sbjct: 123 LTHPMMRRR-NGRIINITSIVGVTGNPGQANYCASKAGLIGFSKSLAQEIASRNVTVNCI 181
Query: 179 APWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI 238
           AP  I+++M     E  +     D I    P+ R G   ++++ V +L    A+Y+TGQ 
Sbjct: 182 APGFIESAMTGKLNEKQK-----DAIMGNIPMKRMGVGADIAAAVVYLASDEAAYVTGQT 236
Query: 239 ICVD 242
           + V+
Sbjct: 237 LHVN 240

>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263

Iteration: 1
 Score =  102 bits (254), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 122/250 (48%), Gaps = 19/250 (7%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           A+VTGG++GIG A    L + GA V     + +   A +   +N GF V     D++ R 
Sbjct: 15  AIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVE---VDVTKRA 71
Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
             +  ++       G  ++L  NA ++ ++P VDIT E+       N   VF  +Q+A  
Sbjct: 72  SVDAAMQKAIDAL-GGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACR 130
Query: 123 LFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
            F AS   G IV  +S+    G P ++ Y A K A+   T+ LA E A  NIR N V P 
Sbjct: 131 HFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPG 190
Query: 182 VIKTSM----------IKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAA 231
            +KT+M          ++        +E++      TP+GR  EP++V+ +V FL   AA
Sbjct: 191 FVKTAMQEREIIWEAELRGMTPEAVRAEYVS----LTPLGRIEEPEDVADVVVFLASDAA 246
Query: 232 SYITGQIICV 241
            ++TGQ I V
Sbjct: 247 RFMTGQGINV 256

>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247

Iteration: 1
 Score =  102 bits (254), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 114/240 (47%), Gaps = 6/240 (2%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           ALVTG +RGIG      LA  GA V   + +Q   +   +  K KGFK  G V ++S  E
Sbjct: 8   ALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSXKEKGFKARGLVLNISDIE 67
Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
             +     + +     ++IL+NNA I         + ++  +V +TN  S+F  S+    
Sbjct: 68  SIQNFFAEIKA-ENLAIDILVNNAGITRDNLXXRXSEDEWQSVINTNLSSIFRXSKECVR 126
Query: 123 LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWV 182
                  G I+ I SV G  G P  + Y A K  +   +K+LA E A  NI  N VAP  
Sbjct: 127 GXXKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGF 186
Query: 183 IKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 242
           I T       +  E   F   IA + P G+ GEP ++++ VAFL    A YITGQ + V+
Sbjct: 187 IATDXTDKLTD--EQKSF---IATKIPSGQIGEPKDIAAAVAFLASEEAKYITGQTLHVN 241

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score =  102 bits (253), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 81/242 (33%), Positives = 118/242 (48%), Gaps = 13/242 (5%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIV--HTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
           ALVTG +RGIG A  E LA  GA V     S N  +  +       KG  +  +V D +S
Sbjct: 8   ALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML--NVTDPAS 65
Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
            E    ++E + + F G+++IL+NNA I      + +  E+ + +  TN  SVF LS+  
Sbjct: 66  IES---VLEKIRAEF-GEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAV 121
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
                   +G I+ I SV G  G    + + A K  +   +K+LA E A   I  N VAP
Sbjct: 122 MRAMMKKRHGRIITIGSVVGTMGNGGQANFAAAKAGLIGFSKSLAREVASRGITVNVVAP 181
Query: 181 WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
             I+T M +   +         GI  Q P GR G   E+++ VAFL    A+YITG+ + 
Sbjct: 182 GFIETDMTRALSDDQRA-----GILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETLH 236
Query: 241 VD 242
           V+
Sbjct: 237 VN 238

>pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258

Iteration: 1
 Score =  101 bits (252), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 117/241 (48%), Gaps = 5/241 (2%)
Query: 3   ALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           ALVTG +RG+G A    LA  G  IV   +R++        E +  G KV     ++   
Sbjct: 7   ALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQP 66
Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
            + +++ + +   F G+L++ +NNAA   ++P +++         + N +++   +Q A 
Sbjct: 67  AKIKEMFQQIDETF-GRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAA 125
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
            L + +G G IV ISS+G +R + + +  G  K A+  LT+ LA E +   I  N V+  
Sbjct: 126 KLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGG 185
Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
            I T  +K F   P   + L+   + TP GR  E  ++   V FL    A  I GQ I V
Sbjct: 186 AIDTDALKHF---PNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVSSKADMIRGQTIIV 242
Query: 242 D 242
           D
Sbjct: 243 D 243

>pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score =  101 bits (252), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/233 (33%), Positives = 114/233 (48%), Gaps = 7/233 (3%)
Query: 11  GIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF-KVTGSVCDLSSREQREKLIE 69
           GIG  T       GA V     ++  L     +  + G  +V   VCD++S E  + LI 
Sbjct: 34  GIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALI- 92
Query: 70  TVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGN 129
           T T    G+L++L+NNA +    P VD+T E+   V +    SV   ++ A   F+   +
Sbjct: 93  TQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDH 152
Query: 130 GS-IVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188
           G  IV  +SV G R   S S Y A K  +  LT+  A E  +  +R N V+P + +    
Sbjct: 153 GGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIAR---- 208
Query: 189 KPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
             F E    SE LD +A     GRA EP EV++ +AFL    +SY+TG+++ V
Sbjct: 209 HKFLEKTSSSELLDRLASDEAFGRAAEPWEVAATIAFLASDYSSYMTGEVVSV 261

>pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol Length = 244

Iteration: 1
 Score =  101 bits (251), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 78/244 (31%), Positives = 119/244 (48%), Gaps = 15/244 (6%)
Query: 1   MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVC-DLS 59
           + ALVTG  +GIG  TV+ L   GA V   +R   +L +   E           VC DL 
Sbjct: 8   LRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG-----IEPVCVDLG 62
Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
             +  EK +  +     G +++L+NNAA+  ++P +++T E      S N  SVF +SQ+
Sbjct: 63  DWDATEKALGGI-----GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQM 117
Query: 120 -AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
            A  +      GSIV +SS+      P++  Y + KGAM  LTK +A E     IR N+V
Sbjct: 118 VARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSV 177
Query: 179 APWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI 238
            P V+ T M K     P   EF   +  + P+ +  E ++V + + FL    ++  +G  
Sbjct: 178 NPTVVLTDMGKKVSADP---EFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTSGGG 234
Query: 239 ICVD 242
           I VD
Sbjct: 235 ILVD 238

>pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score =  100 bits (250), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 113/241 (46%), Gaps = 17/241 (7%)
Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           + LVTGG RGIG A  + LA  G  V    R              KG    G  CD++  
Sbjct: 17  SVLVTGGNRGIGLAIAQRLAADGHKVAVTHRG---------SGAPKGL--FGVECDVTDS 65
Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           +  ++    V    QG + +L++NA ++     + +T E    V + N    F ++Q A 
Sbjct: 66  DAVDRAFTAVEE-HQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRAS 124
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
              + +  G ++FI SV G  GI + + Y A K  +  + +++A E +K N+  N VAP 
Sbjct: 125 RSMQRNKFGRMIFIGSVSGSWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPG 184
Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
            I T M +  +E         G  +  P  R G P EV+ +V+FL    ASYI+G +I V
Sbjct: 185 YIDTDMTRALDE-----RIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPV 239
Query: 242 D 242
           D
Sbjct: 240 D 240

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score =  100 bits (249), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 119/244 (48%), Gaps = 11/244 (4%)
Query: 2   TALVTGGTRGIGHATVEELARFG---AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDL 58
           +ALVTG +RGIG +   +LA  G   A+ +  S+ + E  A + E K KG        ++
Sbjct: 6   SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAE--AVVEEIKAKGVDSFAIQANV 63
Query: 59  SSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQ 118
           +  ++ +  I+ V S F G L++L+NNA I           ++   V  TN + VF+  Q
Sbjct: 64  ADADEVKAXIKEVVSQF-GSLDVLVNNAGITRDNLLXRXKEQEWDDVIDTNLKGVFNCIQ 122
Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
            A P      +G+I+ +SSV G  G P  + Y A K  +  LTK+ A E A   I  N V
Sbjct: 123 KATPQXLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAV 182
Query: 179 APWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI 238
           AP  I +       +     E  +    Q P+ R G+  ++++ VAFL    A YITGQ 
Sbjct: 183 APGFIVSDXTDALSD-----ELKEQXLTQIPLARFGQDTDIANTVAFLASDKAKYITGQT 237
Query: 239 ICVD 242
           I V+
Sbjct: 238 IHVN 241

>pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose Dehydrogenase Length = 269

Iteration: 1
 Score =  100 bits (248), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 127/246 (51%), Gaps = 18/246 (7%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           A+VTGG+ GIG A V+ L R+GA V + S     LD +     +  FK+     D+++ E
Sbjct: 17  AIVTGGSSGIGLAVVDALVRYGAKVVSVS-----LDEKSDVNVSDHFKI-----DVTNEE 66
Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
           + ++ +E  T  + G+++IL+NNA I    P      E    +   N    + +++   P
Sbjct: 67  EVKEAVEKTTKKY-GRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIP 125
Query: 123 LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWV 182
           +  A G+GSI+ I+SV       + + Y   K A+  LT+++A ++A   IR N V P  
Sbjct: 126 VMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAP-KIRCNAVCPGT 184
Query: 183 IKTSMI---KPFEEGPEGSEFLDGI---ARQTPIGRAGEPDEVSSLVAFLCLPAASYITG 236
           I T M+      E G + +     I    RQ P+GR G P+EV+ +VAFL    +S+ITG
Sbjct: 185 IMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLASDRSSFITG 244
Query: 237 QIICVD 242
             + VD
Sbjct: 245 ACLTVD 250

>pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l Length = 267

Iteration: 1
 Score = 99.8 bits (247), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 115/242 (47%), Gaps = 19/242 (7%)
Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG-FKVTGSVCDLSS 60
           + LVTGG RGIG A  + LA  G  V    R              KG F V   V D  +
Sbjct: 37  SVLVTGGNRGIGLAIAQRLAADGHKVAVTHRG---------SGAPKGLFGVEVDVTDSDA 87
Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
            ++    +E      QG + +L++NA ++     + +T E    V + N    F ++Q A
Sbjct: 88  VDRAFTAVEE----HQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRA 143
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
               + +  G ++FI+SV G+ GI + + Y A K  +  + +++A E +K N+  N VAP
Sbjct: 144 SRSMQRNKFGRMIFIASVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAP 203
Query: 181 WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
             I T M +  +E         G  +  P  R G P EV+ +V+FL    ASYI+G +I 
Sbjct: 204 GYIDTDMTRALDE-----RIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIP 258
Query: 241 VD 242
           VD
Sbjct: 259 VD 260

>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269

Iteration: 1
 Score = 99.4 bits (246), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/242 (34%), Positives = 116/242 (47%), Gaps = 11/242 (4%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHT-CSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           ALVTG +RGIG A   ELA  GA V    + +    D  +      G +      D+S  
Sbjct: 31  ALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQE 90
Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
            + E L   V   + G+L++L+NNA I      + +  +D  +V   N   VF  S+ A 
Sbjct: 91  SEVEALFAAVIERW-GRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAA 149
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
            +     +G I+ I+SV G  G P  + Y A K  +  LTK +A E A   I  N VAP 
Sbjct: 150 KIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPG 209
Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCL-PAASYITGQIIC 240
            I T M           + L+ I    P+GR GE  EV+ +V FL   PAA+YITGQ+I 
Sbjct: 210 FIATDMTSEL----AAEKLLEVI----PLGRYGEAAEVAGVVRFLAADPAAAYITGQVIN 261
Query: 241 VD 242
           +D
Sbjct: 262 ID 263

>pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 99.0 bits (245), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 114/242 (47%), Gaps = 19/242 (7%)
Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG-FKVTGSVCDLSS 60
           + LVTGG RGIG A  + LA  G  V    R              KG F V   V D  +
Sbjct: 17  SVLVTGGNRGIGLAIAQRLAADGHKVAVTHRG---------SGAPKGLFGVEVDVTDSDA 67
Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
            ++    +E      QG + +L++NA ++     + +T E    V + N    F ++Q A
Sbjct: 68  VDRAFTAVEE----HQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRA 123
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
               + +  G ++FI SV G+ GI + + Y A K  +  + +++A E +K N+  N VAP
Sbjct: 124 SRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAP 183
Query: 181 WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
             I T M +  +E         G  +  P  R G P EV+ +V+FL    ASYI+G +I 
Sbjct: 184 GYIDTDMTRALDE-----RIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIP 238
Query: 241 VD 242
           VD
Sbjct: 239 VD 240

>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262

Iteration: 1
 Score = 97.8 bits (242), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 120/246 (48%), Gaps = 15/246 (6%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQ 63
           LVTG    IG AT   LA  G  +     N+  L+      + KG +    VCD++S E 
Sbjct: 11  LVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEA 70
Query: 64  REKLIETVTSIFQGKLNILINNAAI--AFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
               +++V   F GK++ L NNA    AF  P  D  ++D + V + N    FH+ +   
Sbjct: 71  VIGTVDSVVRDF-GKIDFLFNNAGYQGAFA-PVQDYPSDDFARVLTINVTGAFHVLKAVS 128
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
                   G IV  +S+ GV+G P+++ YG  KGA+  LT+  A + A  NIR N ++P 
Sbjct: 129 RQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPG 188
Query: 182 VIKTSMI--KPFE-EGPEGSEFLDG----IARQ----TPIGRAGEPDEVSSLVAFLCLPA 230
            +    +  +  E +   GS++       +A+Q     P+ R G+ +E+  +VAFL    
Sbjct: 189 YMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAFLLGDD 248
Query: 231 ASYITG 236
           +S++TG
Sbjct: 249 SSFMTG 254

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 97.1 bits (240), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/248 (29%), Positives = 116/248 (46%), Gaps = 16/248 (6%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQ---IELDARLHEWKNKGFKVTGSVCDLS 59
           ALVTGG+RGIG    + L   GA V  C+R+     +   RL  + +          DLS
Sbjct: 32  ALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGD----CQAIPADLS 87
Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
           S     +L + +  +   +L+IL+NNA  ++              V   N  SVF   Q 
Sbjct: 88  SEAGARRLAQALGEL-SARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQ 146
Query: 120 AHPLFKASGNGS----IVFISSVGGVRGIPSVSL-YGAYKGAMNQLTKNLACEWAKDNIR 174
             PL + S +      ++ I SV G+  +   +  YG  K A++QL++ LA E   ++I 
Sbjct: 147 LLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKELVGEHIN 206
Query: 175 TNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYI 234
            N +AP    + M +     P+    L+  +   P+GR G P+E+++L   L   A +Y+
Sbjct: 207 VNVIAPGRFPSRMTRHIANDPQA---LEADSASIPMGRWGRPEEMAALAISLAGTAGAYM 263
Query: 235 TGQIICVD 242
           TG +I +D
Sbjct: 264 TGNVIPID 271

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 123/253 (48%), Gaps = 15/253 (5%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF---KVTGSVCDLS 59
           A++TG + GIG AT    AR GA V    R+   L+    +    G     V   V D++
Sbjct: 9   AIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVT 68
Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDI-TAEDMSTVSST---NFESVFH 115
           +   +++++ T    F GKL+IL+NNA  A         TA+ + +  +T   N  SV  
Sbjct: 69  TDAGQDEILSTTLGKF-GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIA 127
Query: 116 LSQLAHPLFKASGNGSIVFISSVG-GVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIR 174
           L++ A P   +S  G IV ISS+  G+   P    Y   K A++Q T+N A +  +  IR
Sbjct: 128 LTKKAVPHL-SSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIR 186
Query: 175 TNTVAPWVIKT----SMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLC-LP 229
            N+++P ++ T    +M  P E   +    +  +    P G  G+P +++ ++AFL    
Sbjct: 187 VNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFLADRK 246
Query: 230 AASYITGQIICVD 242
            +SYI G  + VD
Sbjct: 247 TSSYIIGHQLVVD 259

>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase Length = 258

Iteration: 1
 Score = 95.5 bits (236), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 82/258 (31%), Positives = 122/258 (47%), Gaps = 28/258 (10%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDA----RLHEWKNK-----GFKVTG 53
           A+VTGG +GIG    E+LA  G  +      Q E  A    +L E  ++     G  VT 
Sbjct: 5   AMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTD 64
Query: 54  SV-CDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFES 112
               D +  E  EKL         G  ++L+NNA IA +KP +++T ED+  + S N  S
Sbjct: 65  KANFDSAIDEAAEKL---------GGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFS 115
Query: 113 VFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKD 171
           VF   Q A   F   G  G I+  +S+  ++G P +S Y   K A+  LT+  A E A  
Sbjct: 116 VFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPK 175
Query: 172 NIRTNTVAPWVIKTSM-------IKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVA 224
               N  AP ++ T M       +      P G  F +  +    +GR   P++V+ LV+
Sbjct: 176 GHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKE-YSSSIALGRPSVPEDVAGLVS 234
Query: 225 FLCLPAASYITGQIICVD 242
           FL    ++Y+TGQ++ VD
Sbjct: 235 FLASENSNYVTGQVMLVD 252

>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256

Iteration: 1
 Score = 94.4 bits (233), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 114/253 (45%), Gaps = 20/253 (7%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           ALVTG  +GIG A    L + G  V     N     A   E    G        D+S R+
Sbjct: 5   ALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRD 64
Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
           Q    +E       G  ++++NNA +A   P   IT E +  V + N + V    Q A  
Sbjct: 65  QVFAAVEQARKTL-GGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVE 123
Query: 123 LFKASGNG-SIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
            FK  G+G  I+   S  G  G P +++Y + K A+  LT+  A + A   I  N   P 
Sbjct: 124 AFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPG 183
Query: 182 VIKTSMI------------KPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLP 229
           ++KT M             KP   G   +EF    A++  +GR  EP++V++ V++L  P
Sbjct: 184 IVKTPMWAEIDRQVSEAAGKPLGYGT--AEF----AKRITLGRLSEPEDVAACVSYLASP 237
Query: 230 AASYITGQIICVD 242
            + Y+TGQ + +D
Sbjct: 238 DSDYMTGQSLLID 250

>pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 256

Iteration: 1
 Score = 94.0 bits (232), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 111/235 (47%), Gaps = 7/235 (2%)
Query: 3   ALVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           A VTGG  GIG +  + L + G  +V  C  N       L + K  GF    S  ++   
Sbjct: 16  AYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDW 75
Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           +  ++  + V +   G++++L+NNA I        +T ED   V  TN  S+F++++   
Sbjct: 76  DSTKQAFDKVKAEV-GEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVI 134
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
                 G G I+ ISSV G +G    + Y   K  ++  T +LA E A   +  NTV+P 
Sbjct: 135 DGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPG 194
Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG 236
            I T M+K         + L+ I    P+ R G PDE+ S+VA+L    + + TG
Sbjct: 195 YIGTDMVKAIR-----PDVLEKIVATIPVRRLGSPDEIGSIVAWLASEESGFSTG 244

>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255

Iteration: 1
 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/247 (32%), Positives = 111/247 (44%), Gaps = 9/247 (3%)
Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           TALVTG T GIG    + LAR GA  +       +    L E    G K      DLS  
Sbjct: 6   TALVTGSTSGIGLGIAQVLARAGA--NIVLNGFGDPAPALAEIARHGVKAVHHPADLSDV 63
Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
            Q E L       F G ++IL+NNA I  V P      E    + + N  +VFH ++LA 
Sbjct: 64  AQIEALFALAEREF-GGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLAL 122
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP- 180
           P  +A   G I+ I+SV G+ G    + Y A K  +  LTK +  E A  N+  N + P 
Sbjct: 123 PGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPG 182
Query: 181 WVIKTSMIKPFEE-GPEGSEFL----DGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT 235
           WV+   + K  ++    G + L    D +A + P      P+ +  LV FLC  A S + 
Sbjct: 183 WVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCSEAGSQVR 242
Query: 236 GQIICVD 242
           G    VD
Sbjct: 243 GAAWNVD 249

>pdb|1O5I|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Reductase (Tm1169) From Thermotoga Maritima At 2.50 A Resolution Length = 249

Iteration: 1
 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/239 (30%), Positives = 112/239 (46%), Gaps = 20/239 (8%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQ 63
           LV   +RGIG A  + L++ GA V  C+RN+  L    H +          VCDL  R+ 
Sbjct: 23  LVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRY---------VVCDL--RKD 71
Query: 64  REKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPL 123
            + L E V  +     +IL+ NA         ++T ED      + F ++  + +   P 
Sbjct: 72  LDLLFEKVKEV-----DILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPA 126
Query: 124 FKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVI 183
            K  G G IV I+S   +  I ++    + + A+    K L+ E A   I  N VAP   
Sbjct: 127 MKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWT 186
Query: 184 KTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 242
           +T  +K      +  +    +  Q P+ R  +P+E++S+VAFLC   ASY+TGQ I VD
Sbjct: 187 ETERVKELLSEEKKKQ----VESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQTIVVD 241

>pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein Length = 273

Iteration: 1
 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 115/242 (47%), Gaps = 8/242 (3%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           A++TG T GIG A  +     GA V    R +  LDA + E    G    G   D ++  
Sbjct: 32  AVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---GGGAVGIQADSANLA 88
Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
           + ++L E V +   G++++L  NA      P  ++T E        N + V    Q A P
Sbjct: 89  ELDRLYEKVKA-EAGRIDVLFVNAGGGSXLPLGEVTEEQYDDTFDRNVKGVLFTVQKALP 147
Query: 123 LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWV 182
           L  A G+ S+V   S  G  G P+ S+Y A K A+    +N   +     IR NT++P  
Sbjct: 148 LL-ARGS-SVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGP 205
Query: 183 IKTS-MIKPFEEGP-EGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
            +T+ +++   + P +    L+ +A Q P GR G  +EV++   FL    +S++TG  + 
Sbjct: 206 TETTGLVELAGKDPVQQQGLLNALAAQVPXGRVGRAEEVAAAALFLASDDSSFVTGAELF 265
Query: 241 VD 242
           VD
Sbjct: 266 VD 267

>pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269

Iteration: 1
 Score = 93.2 bits (230), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 121/250 (48%), Gaps = 24/250 (9%)
Query: 4   LVTGGTRGIGHATVEELARFG-----AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDL 58
           ++TGG+ G+G A      RFG      +++  +  +  LDA+  E +  G +      D+
Sbjct: 19  VITGGSTGLGRAMA---VRFGQEEAKVVINYYNNEEEALDAK-KEVEEAGGQAIIVQGDV 74
Query: 59  SSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQ 118
           +  E    L++T    F G L+++INNA +    P+ +++ ++ + V  TN    F  S+
Sbjct: 75  TKEEDVVNLVQTAIKEF-GTLDVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAFLGSR 133
Query: 119 LAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
            A   F  +   G+++ +SSV  +   P    Y A KG M  +T+ LA E+A   IR N 
Sbjct: 134 EAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNN 193
Query: 178 VAPWVIKTSMIKPFEEGPEGSEFLDGIAR-----QTPIGRAGEPDEVSSLVAFLCLPAAS 232
           + P  + T +           +F D + R       P+G  G+P+EV+++ AFL    AS
Sbjct: 194 IGPGAMNTPI--------NAEKFADPVQRADVESMIPMGYIGKPEEVAAVAAFLASSQAS 245
Query: 233 YITGQIICVD 242
           Y+TG  +  D
Sbjct: 246 YVTGITLFAD 255

>pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269

Iteration: 1
 Score = 93.2 bits (230), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 121/250 (48%), Gaps = 24/250 (9%)
Query: 4   LVTGGTRGIGHATVEELARFG-----AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDL 58
           ++TGG+ G+G A      RFG      +++  +  +  LDA+  E +  G +      D+
Sbjct: 19  VITGGSTGLGRAMA---VRFGQEEAKVVINYYNNEEEALDAK-KEVEEAGGQAIIVQGDV 74
Query: 59  SSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQ 118
           +  E    L++T    F G L+++INNA +    P+ +++ ++ + V  TN    F  S+
Sbjct: 75  TKEEDVVNLVQTAIKEF-GTLDVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAFLGSR 133
Query: 119 LAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
            A   F  +   G+++ +SSV  +   P    Y A KG M  +T+ LA E+A   IR N 
Sbjct: 134 EAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNN 193
Query: 178 VAPWVIKTSMIKPFEEGPEGSEFLDGIAR-----QTPIGRAGEPDEVSSLVAFLCLPAAS 232
           + P  + T +           +F D + R       P+G  G+P+EV+++ AFL    AS
Sbjct: 194 IGPGAMNTPI--------NAEKFADPVQRADVESMIPMGYIGKPEEVAAVAAFLASSQAS 245
Query: 233 YITGQIICVD 242
           Y+TG  +  D
Sbjct: 246 YVTGITLFAD 255

>pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269

Iteration: 1
 Score = 93.2 bits (230), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 121/250 (48%), Gaps = 24/250 (9%)
Query: 4   LVTGGTRGIGHATVEELARFG-----AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDL 58
           ++TGG+ G+G A      RFG      +++  +  +  LDA+  E +  G +      D+
Sbjct: 19  VITGGSTGLGRAMA---VRFGQEEAKVVINYYNNEEEALDAK-KEVEEAGGQAIIVQGDV 74
Query: 59  SSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQ 118
           +  E    L++T    F G L+++INNA +    P+ +++ ++ + V  TN    F  S+
Sbjct: 75  TKEEDVVNLVQTAIKEF-GTLDVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAFLGSR 133
Query: 119 LAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
            A   F  +   G+++ +SSV  +   P    Y A KG M  +T+ LA E+A   IR N 
Sbjct: 134 EAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNN 193
Query: 178 VAPWVIKTSMIKPFEEGPEGSEFLDGIAR-----QTPIGRAGEPDEVSSLVAFLCLPAAS 232
           + P  + T +           +F D + R       P+G  G+P+EV+++ AFL    AS
Sbjct: 194 IGPGAMNTPI--------NAEKFADPVQRADVESMIPMGYIGKPEEVAAVAAFLASSQAS 245
Query: 233 YITGQIICVD 242
           Y+TG  +  D
Sbjct: 246 YVTGITLFAD 255

>pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273

Iteration: 1
 Score = 93.2 bits (230), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 112/241 (46%), Gaps = 6/241 (2%)
Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           TA+VTG   GIG A     AR GA V    R    +     E  + G      V DL+  
Sbjct: 33  TAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTD-GVKEVADEIADGGGSAEAVVADLADL 91
Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           E    + E + +    ++++L+NNA I    P  +++      V + N ++ + LS+   
Sbjct: 92  EGAANVAEELAATR--RVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFG 149
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
               A G+G IV I+S+   +G  +V+ Y A K A+  LT+ LA EWA   +  N +AP 
Sbjct: 150 TAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPG 209
Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
            + T+         E +     I  + P GR   P+++     FL   AASY+ GQ++ V
Sbjct: 210 YVVTANTAALRADDERAAE---ITARIPAGRWATPEDMVGPAVFLASDAASYVHGQVLAV 266
Query: 242 D 242
           D
Sbjct: 267 D 267

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 123/253 (48%), Gaps = 17/253 (6%)
Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE----WKNK-GFKVTGSVC 56
            A++TG + GIG A  E  A+ GA +   +R Q++   RLHE     K K G +V     
Sbjct: 9   VAVITGSSSGIGLAIAEGFAKEGAHIVLVAR-QVD---RLHEAARSLKEKFGVRVLEVAV 64
Query: 57  DLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHL 116
           D+++ E  + ++E+V S F G  +IL+NNA     +  ++   E        +  +   L
Sbjct: 65  DVATPEGVDAVVESVRSSFGGA-DILVNNAGTGSNETIMEAADEKWQFYWELHVMAAVRL 123
Query: 117 SQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTN 176
           ++   P  +A G G+I+  +S+  V+ +    +Y   K A+   +K LA E  KDNIR N
Sbjct: 124 ARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVN 183
Query: 177 TVAPWVIKT-SMIKPFEE-----GPEGSEFLDGIA-RQTPIGRAGEPDEVSSLVAFLCLP 229
            + P +I T   IK  +E     G +   +L  +A    PI R   P+E+++   FLC  
Sbjct: 184 CINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFVFLCSE 243
Query: 230 AASYITGQIICVD 242
            A+Y  G    VD
Sbjct: 244 RATYSVGSAYFVD 256

>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244

Iteration: 1
 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 109/244 (44%), Gaps = 14/244 (5%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHT----CSRNQIELDARLHEWKNKGFKVTGSVCDLS 59
           +VTG +RGIG A    L + G  V       ++   E+  ++  +  +     G   D+S
Sbjct: 5   VVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGG---DVS 61
Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
                E +++T    + G +++++NNA I      + +       V   N   VF  +Q 
Sbjct: 62  KEADVEAMMKTAIDAW-GTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQA 120
Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
           A  +      G I+ I+SV G+ G    + Y A K  +   +K  A E A  NI  N V 
Sbjct: 121 ATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVC 180
Query: 180 PWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCL-PAASYITGQI 238
           P  I + M     E  E       I    P+GR G+P+ V+ LV FL L PAASYITGQ 
Sbjct: 181 PGFIASDMTAKLGEDMEKK-----ILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQA 235
Query: 239 ICVD 242
             +D
Sbjct: 236 FTID 239

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 111/249 (44%), Gaps = 13/249 (5%)
Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           TAL+TG  RGIG A  E   R GA V       I L+A        G        D++ +
Sbjct: 7   TALITGSARGIGRAFAEAYVREGARVAIA---DINLEAARATAAEIGPAACAIALDVTDQ 63
Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFE-SVFHLSQLA 120
              ++ +  +   + G ++IL+NNAA+  + P V+IT E    + + N   ++F +  +A
Sbjct: 64  ASIDRCVAELLDRW-GSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVA 122
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
             +      G I+ ++S  G RG   V +Y A K A+  LT++      +  I  N +AP
Sbjct: 123 RAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAP 182
Query: 181 WVIK-------TSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASY 233
            V+         +    +E  P G E    +    P GR G  ++++ +  FL  P A Y
Sbjct: 183 GVVDGEHWDGVDAKFADYENLPRG-EKKRQVGAAVPFGRMGRAEDLTGMAIFLATPEADY 241
Query: 234 ITGQIICVD 242
           I  Q   VD
Sbjct: 242 IVAQTYNVD 250

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 91.3 bits (225), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 123/253 (48%), Gaps = 17/253 (6%)
Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE----WKNK-GFKVTGSVC 56
            A++TG + GIG A  E  A+ GA +   +R Q++   RLHE     K K G +V     
Sbjct: 9   VAVITGSSSGIGLAIAEGFAKEGAHIVLVAR-QVD---RLHEAARSLKEKFGVRVLEVAV 64
Query: 57  DLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHL 116
           D+++ E  + ++E+V S F G  +IL+NNA     +  ++   E           +   L
Sbjct: 65  DVATPEGVDAVVESVRSSFGGA-DILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRL 123
Query: 117 SQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTN 176
           ++   P  +A G G+I+  +S+  V+ +    +Y   K A+   +K LA E  KDNIR N
Sbjct: 124 ARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVN 183
Query: 177 TVAPWVIKT-SMIKPFEE-----GPEGSEFLDGIARQ-TPIGRAGEPDEVSSLVAFLCLP 229
            + P +I T   IK  +E     G +   +L  +A +  PI R   P+E+++   FLC  
Sbjct: 184 CINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFVFLCSE 243
Query: 230 AASYITGQIICVD 242
            A+Y  G    VD
Sbjct: 244 RATYSVGSAYFVD 256

>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254

Iteration: 1
 Score = 90.9 bits (224), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 117/244 (47%), Gaps = 11/244 (4%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQ 63
           +VTG   GIG A  ++ A   +IV      +  L+  + E +  G +V G   D+S ++ 
Sbjct: 11  IVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKD 70
Query: 64  REKLIETVTSIFQGKLNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
            E+ +      +  ++++L NNA I   V P  +++ E    V + N  S F+ S+   P
Sbjct: 71  VEEFVRRTFETYS-RIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIP 129
Query: 123 LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWV 182
           +    G G IV  +S+ G+RG  + + Y   K  +  LT+++A  +    IR   V P  
Sbjct: 130 IMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGT 189
Query: 183 IKTSM----IKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI 238
           +KT++     KP E G      L  ++      R  EP+++++++ FL    AS++ G  
Sbjct: 190 VKTNIGLGSSKPSELGMRTLTKLMSLS-----SRLAEPEDIANVIVFLASDEASFVNGDA 244
Query: 239 ICVD 242
           + VD
Sbjct: 245 VVVD 248

>pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 90.5 bits (223), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 118/247 (47%), Gaps = 28/247 (11%)
Query: 3   ALVTGGTRGIG----HATVEELAR--FGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVC 56
           ALV+GG RG+G     A V E A+  FG I+    +      A    + +          
Sbjct: 10  ALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVH---------L 60
Query: 57  DLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVF-H 115
           D++   Q +  ++T  + F G L++L+NNA I  +    D    +   +   N   VF  
Sbjct: 61  DVTQPAQWKAAVDTAVTAF-GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLG 119
Query: 116 LSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
           +  +  P+ K +G GSI+ ISS+ G+ G  +   Y A K A+  LTK+ A E     IR 
Sbjct: 120 IRAVVKPM-KEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRV 178
Query: 176 NTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT 235
           N++ P ++KT M          ++++     QT +GRA EP EVS+LV +L    +SY T
Sbjct: 179 NSIHPGLVKTPM----------TDWVPEDIFQTALGRAAEPVEVSNLVVYLASDESSYST 228
Query: 236 GQIICVD 242
           G    VD
Sbjct: 229 GAEFVVD 235

>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 115/246 (46%), Gaps = 18/246 (7%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           A++TG   GIG  T   LAR GA V      + +L        + G      V DL++  
Sbjct: 14  AIITGACGGIGLETSRVLARAGARVVLADLPETDLAG---AAASVGRGAVHHVVDLTNEV 70
Query: 63  QREKLIETVTSIFQGKLNILINNAA------IAFVKPTVDITAEDMSTVSSTNFESVFHL 116
               LI+     F G+L+I+ NNAA      +   + TVD+  +D  TV   N      +
Sbjct: 71  SVRALIDFTIDTF-GRLDIVDNNAAHSDPADMLVTQMTVDVW-DDTFTV---NARGTMLM 125
Query: 117 SQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTN 176
            + A P   ++G G+IV ISS          + Y   K A+  LT+ +A ++ +  +R N
Sbjct: 126 CKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRHGVRCN 185
Query: 177 TVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG 236
            +AP +++T  ++     P     +D  A     GR GEP E++ LV FL    A++ITG
Sbjct: 186 AIAPGLVRTPRLEVGLPQP----IVDIFATHHLAGRIGEPHEIAELVCFLASDRAAFITG 241
Query: 237 QIICVD 242
           Q+I  D
Sbjct: 242 QVIAAD 247

>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 119/243 (48%), Gaps = 9/243 (3%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           A++TGGT GIG A   +    GA V    R+  ++  +  +      ++     D S  +
Sbjct: 9   AIITGGTLGIGLAIATKFVEEGAKVMITDRHS-DVGEKAAKSVGTPDQIQFFQHDSSDED 67
Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
              KL +     F G ++ L+NNA IA  K   + T  +   + + N + VF  ++L   
Sbjct: 68  GWTKLFDATEKAF-GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQ 126
Query: 123 LFKASGNG-SIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA-KD-NIRTNTVA 179
             K  G G SI+ +SS+ G  G PS+  Y A KGA+  ++K+ A + A KD ++R NTV 
Sbjct: 127 RMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVH 186
Query: 180 PWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
           P  IKT ++        G+E       +TP+G  GEP++++ +  +L    + + TG   
Sbjct: 187 PGYIKTPLVDDL----PGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFATGSEF 242
Query: 240 CVD 242
            VD
Sbjct: 243 VVD 245

>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 119/245 (48%), Gaps = 13/245 (5%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF--KVTGSVCDLSS 60
           A++TGGT GIG A   +    GA V    R+    D      K+ G   ++     D S 
Sbjct: 9   AIITGGTLGIGLAIATKFVEEGAKVMITGRHS---DVGEKAAKSVGTPDQIQFFQHDSSD 65
Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
            +   KL +     F G ++ L+NNA IA  K   + T  +   + + N + VF  ++L 
Sbjct: 66  EDGWTKLFDATEKAF-GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLG 124
Query: 121 HPLFKASGNG-SIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA-KD-NIRTNT 177
               K  G G SI+ +SS+ G  G PS+  Y A KGA+  ++K+ A + A KD ++R NT
Sbjct: 125 IQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNT 184
Query: 178 VAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ 237
           V P  IKT ++        G+E       +TP+G  GEP++++ +  +L    + + TG 
Sbjct: 185 VHPGYIKTPLVDDL----PGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFATGS 240
Query: 238 IICVD 242
              VD
Sbjct: 241 EFVVD 245

>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 122/254 (48%), Gaps = 15/254 (5%)
Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF---KVTGSVCDL 58
           T ++TG + GIG  T    A+ GA V    R+   L+         G    +V   V D+
Sbjct: 8   TVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADV 67
Query: 59  SSREQREKLIETVTSIFQGKLNILINNAAIA----FVKPTVDITAEDMSTVSSTNFESVF 114
           ++ + ++++I +    F GK+++L+NNA  A    F     D   +        N ++V 
Sbjct: 68  TTEDGQDQIINSTLKQF-GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVI 126
Query: 115 HLSQLAHPLFKASGNGSIVFISS-VGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNI 173
            +++   P   AS  G IV +SS V G +  P    Y   K A++Q T++ A + AK  I
Sbjct: 127 EMTKKVKPHLVAS-KGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGI 185
Query: 174 RTNTVAPWVIKT----SMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLP 229
           R N+V+P +++T    +M  P +   +   F+       PIG AG+P+ +++++ FL   
Sbjct: 186 RVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFLADR 245
Query: 230 AAS-YITGQIICVD 242
             S YI GQ I  D
Sbjct: 246 NLSFYILGQSIVAD 259

>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261

Iteration: 1
 Score = 89.7 bits (221), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 112/246 (45%), Gaps = 10/246 (4%)
Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            AL+TG   G G    +  A+ GA V    R++   +    E  +    V     D+S  
Sbjct: 11  VALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVA---ADISKE 67
Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD-ITAEDMSTVSSTNFESVFHLSQLA 120
              +  +E   S F GK++IL+NNA I       + +  E+   +   N   V+ ++   
Sbjct: 68  ADVDAAVEAALSKF-GKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKL 126
Query: 121 HPLFKASGNGS----IVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTN 176
            P FK +G       I+ ++S G  R  P+++ Y A KG +  +TK LA E A   IR  
Sbjct: 127 IPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELAPAKIRVV 186
Query: 177 TVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG 236
            + P   +T ++  F  G +  E         P+GR  +PD+++   AFLC P AS ITG
Sbjct: 187 ALNPVAGETPLLTTFM-GEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLCSPQASMITG 245
Query: 237 QIICVD 242
             + VD
Sbjct: 246 VALDVD 251

>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271

Iteration: 1
 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 109/243 (44%), Gaps = 11/243 (4%)
Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE-LDARLHEWKNKGFKVTGSVCDLSS 60
           TA VTGG+RGIG A  + LA  GA V     N  E   A + E +  G +      D   
Sbjct: 33  TAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRD 92
Query: 61  REQREKLI-ETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
            E  E+ I ETV ++  G L+IL+N+A I    P  + T  D   V + NF + F   + 
Sbjct: 93  AEAIEQAIRETVEAL--GGLDILVNSAGIWHSAPLEETTVADFDEVXAVNFRAPFVAIRS 150
Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
           A       G   I   S++  +   P +SLY A K A+  LTK LA +     I  N V 
Sbjct: 151 ASRHLGDGGR-IITIGSNLAELVPWPGISLYSASKAALAGLTKGLARDLGPRGITVNIVH 209
Query: 180 PWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
           P    T      +  P   +  +    +   G  GEP +++ LVA+L  P   ++TG  +
Sbjct: 210 PGSTDT------DXNPADGDHAEAQRERIATGSYGEPQDIAGLVAWLAGPQGKFVTGASL 263
Query: 240 CVD 242
            +D
Sbjct: 264 TID 266

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score = 89.0 bits (219), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 116/242 (47%), Gaps = 28/242 (11%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIV--HTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
           ALVTG +RGIG A  E LA  GA V     S N  +  +       KG  +  +V D +S
Sbjct: 8   ALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML--NVTDPAS 65
Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
            E    ++E + + F G+++IL+NNA I      + +  E+ + +  TN  SVF LS+  
Sbjct: 66  IES---VLEKIRAEF-GEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAV 121
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
                   +G I+   ++GG       + Y A K  +   +K+LA E A   I  N VAP
Sbjct: 122 MRAMMKKRHGRII---TIGGQ------ANYAAAKAGLIGFSKSLAREVASRGITVNVVAP 172
Query: 181 WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
             I+TS            +   GI  Q P GR G   E+++ VAFL    A+YITG+ + 
Sbjct: 173 GFIETS-----------DDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETLH 221
Query: 241 VD 242
           V+
Sbjct: 222 VN 223

>pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal Beta-Oxidation: Crystal Structure Of The Ternary Complex Of Pdcr Length = 277

Iteration: 1
 Score = 87.8 bits (216), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 112/244 (45%), Gaps = 10/244 (4%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           A +TGG  GIG    E   R G      SR+      R+     K    TG  C   S +
Sbjct: 30  AFITGGGSGIGFRIAEIFMRHGCHTVIASRSL----PRVLTAARKLAGATGRRCLPLSMD 85
Query: 63  QR--EKLIETVTSIFQ--GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQ 118
            R    ++  V    +  G+++ILIN AA  F+ P   ++     TV   +    F++S+
Sbjct: 86  VRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSR 145
Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
           + +  F     G IV I++  G RG       G+ K A++ +T++LA EW   NIR N++
Sbjct: 146 VLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSL 205
Query: 179 APWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI 238
           AP  I  +       GP+ S  L      +P+ R G   E++  V +L  P ASY+TG +
Sbjct: 206 APGPISGTEGLRRLGGPQAS--LSTKVTASPLQRLGNKTEIAHSVLYLASPLASYVTGAV 263
Query: 239 ICVD 242
           +  D
Sbjct: 264 LVAD 267

>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317

Iteration: 1
 Score = 87.8 bits (216), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 79/267 (29%), Positives = 118/267 (44%), Gaps = 32/267 (11%)
Query: 3   ALVTGGTRGIGHATVEELARFGA---IVHTCSRNQIELD------------ARLHEWKNK 47
           A +TG  RG G      LA+ GA    +  C R Q  LD             RL E   +
Sbjct: 49  AFITGAARGQGRTHAVRLAQDGADIVAIDLC-RQQPNLDYAQGSPEELKETVRLVE--EQ 105
Query: 48  GFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSS 107
           G ++     D+      + +++   + F G ++IL++N  I+     V +T +  S +  
Sbjct: 106 GRRIIARQADVRDLASLQAVVDEALAEF-GHIDILVSNVGISNQGEVVSLTDQQWSDILQ 164
Query: 108 TNFESVFHLSQLAHPLFKASGNG-SIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLAC 166
           TN    +H  +   P     G G S++F+SS  G+RG P  S Y A K  +  L  +LA 
Sbjct: 165 TNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQGLMLSLAN 224
Query: 167 EWAKDNIRTNTVAPWVIKT---------SMIKPFEEGPEGSEFLDGIARQT--PIGRAGE 215
           E  + NIR N+V P  + T          M  P  E P   +  +  ++ T  PI    E
Sbjct: 225 EVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLPIPWV-E 283
Query: 216 PDEVSSLVAFLCLPAASYITGQIICVD 242
           P++VS+ VA+L    A YI G  I VD
Sbjct: 284 PEDVSNAVAWLASDEARYIHGAAIPVD 310

>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255

Iteration: 1
 Score = 87.8 bits (216), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 115/249 (46%), Gaps = 19/249 (7%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIV--HTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
           ALVTG +RGIG A  + LA  GA+V  H  +R + E +  ++E ++ G        +L S
Sbjct: 10  ALVTGASRGIGRAIAKRLANDGALVAIHYGNRKE-EAEETVYEIQSNGGSAFSIGANLES 68
Query: 61  REQREKLIETVTSIFQG-----KLNILINNAAI---AFVKPTVDITAEDMSTVSSTNFES 112
               E L  ++ +  Q      K +ILINNA I   AF++ T   T +      S N ++
Sbjct: 69  LHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEET---TEQFFDRXVSVNAKA 125
Query: 113 VFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDN 172
            F + Q A  L +   N  I+ ISS      +P    Y   KGA+N  T  LA +     
Sbjct: 126 PFFIIQQA--LSRLRDNSRIINISSAATRISLPDFIAYSXTKGAINTXTFTLAKQLGARG 183
Query: 173 IRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAAS 232
           I  N + P  +KT         P   ++   I   +   R GE ++++   AFL  P + 
Sbjct: 184 ITVNAILPGFVKTDXNAELLSDPXXKQYATTI---SAFNRLGEVEDIADTAAFLASPDSR 240
Query: 233 YITGQIICV 241
           ++TGQ+I V
Sbjct: 241 WVTGQLIDV 249

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 105/243 (43%), Gaps = 13/243 (5%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQ 63
           +VTG   GIG A  E LAR GA V     N    +A   +    G        D+S  E 
Sbjct: 13  IVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPES 72
Query: 64  REKLIETVTSIFQGKLNILINNAAIAFVKPTVD----ITAEDMSTVSSTNFESVFHLSQL 119
            + + +   + F G ++ L+NNAAI F    +D    I  E      S N +     ++ 
Sbjct: 73  AKAMADRTLAEF-GGIDYLVNNAAI-FGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRA 130
Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
            +      G G+IV  SS          + YG  K  +N LT+ L+ E    NIR N +A
Sbjct: 131 VYKKMTKRGGGAIVNQSSTAAWL---YSNYYGLAKVGINGLTQQLSRELGGRNIRINAIA 187
Query: 180 PWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
           P  I T   +         E +D I +  P+ R G PD++  +  FL    AS+ITGQI 
Sbjct: 188 PGPIDTEANRTTTP----KEMVDDIVKGLPLSRMGTPDDLVGMCLFLLSDEASWITGQIF 243
Query: 240 CVD 242
            VD
Sbjct: 244 NVD 246

>pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 260

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 116/243 (47%), Gaps = 26/243 (10%)
Query: 4   LVTGGTRGIGHATVEELA-RFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           ++TG ++GIG   V     R   +V T    +   D  +H        V G   D+S  E
Sbjct: 32  VITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADPDIH-------TVAG---DISKPE 81
Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
             ++++      F G+++ L+NNA +   KP V+ T ED       N    FH++Q A  
Sbjct: 82  TADRIVREGIERF-GRIDSLVNNAGVFLAKPFVEXTQEDYDHNLGVNVAGFFHITQRAAA 140
Query: 123 LFKASGNGSIVFISSV---GGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
                G+G IV I++        G PS +L    KG +N +T++LA E+++  +R N V+
Sbjct: 141 EXLKQGSGHIVSITTSLVDQPXVGXPS-ALASLTKGGLNAVTRSLAXEFSRSGVRVNAVS 199
Query: 180 PWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
           P VIKT            +E    +A   P+GR GE  +V  + A L L  A +ITG+I+
Sbjct: 200 PGVIKTPX--------HPAETHSTLAGLHPVGRXGEIRDV--VDAVLYLEHAGFITGEIL 249
Query: 240 CVD 242
            VD
Sbjct: 250 HVD 252

>pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus Thuringiensis Length = 264

Iteration: 1
 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 119/249 (47%), Gaps = 21/249 (8%)
Query: 3   ALVTGGTRGIGHATVEEL-ARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           AL+T GT+G+G    E+L A+  ++  T   +   ++     +K+   ++     D++ +
Sbjct: 10  ALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKK 69
Query: 62  EQREKLIETVTSIFQGKLNILINNAA--IAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
           E   K++E   S F GK++ LINNA   +   K  VD   ++ + +   N  +VFHL +L
Sbjct: 70  EDLHKIVEEAMSHF-GKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKL 128
Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSV------SLYGAYKGAMNQLTKNLACEWAKDNI 173
             P+ +    G I+      G +G  S       S + A K  +  LTK +A E A+  I
Sbjct: 129 VVPVMRKQNFGRIINY----GFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEAEYGI 184
Query: 174 RTNTVAPWVIKTSMIKP-FEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAAS 232
             N V P  I   M +   +E  +  E        TPIGR+G  ++++  ++FLC   + 
Sbjct: 185 TANMVCPGDIIGEMKEATIQEARQLKE------HNTPIGRSGTGEDIARTISFLCEDDSD 238
Query: 233 YITGQIICV 241
            ITG II V
Sbjct: 239 MITGTIIEV 247

>pdb|1H5Q|A Chain A, Mannitol Dehydrogenase From Agaricus Bisporus Length = 265

Iteration: 1
 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 117/252 (46%), Gaps = 19/252 (7%)
Query: 2   TALVTGGTRGIGHA---TVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDL 58
           T +VTGG RGIG A    V       A+++  + + +E+  ++   K  G K     CD+
Sbjct: 16  TIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVG--KEFGVKTKAYQCDV 73
Query: 59  SSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQ 118
           S+ +   K I+ + +   G ++ LI NA ++ VKP  ++T ED + V   N   VF+  +
Sbjct: 74  SNTDIVTKTIQQIDADL-GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCR 132
Query: 119 LAHPLF-KASGNGSIVFISSVGG-------VRGIPSVSLYGAYKGAMNQLTKNLACEWAK 170
               L+ +    GSIV  SS+         + G  +   Y + K A + L K LA EWA 
Sbjct: 133 AVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWAS 192
Query: 171 DNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPA 230
             IR N ++P  + T      ++     +  D  A   P+ R  +P+E++     L    
Sbjct: 193 AGIRVNALSPGYVNTDQTAHMDK-----KIRDHQASNIPLNRFAQPEEMTGQAILLLSDH 247
Query: 231 ASYITGQIICVD 242
           A+Y+TG    +D
Sbjct: 248 ATYMTGGEYFID 259

>pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8, Hsd17b8 Length = 264

Iteration: 1
 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/242 (28%), Positives = 110/242 (45%), Gaps = 13/242 (5%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKV-------TGSV 55
           ALVTG   GIG A    LA  GA V  C  ++      +      G K            
Sbjct: 10  ALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQ 69
Query: 56  CDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFH 115
            D+S       L+E V + F    +++++ A I   +  + ++ +D   V + N +  F 
Sbjct: 70  ADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFL 129
Query: 116 LSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIR 174
           ++Q A     ++G  GSI+ ISS+ G  G    + Y A K  +  LT+  A E  +  IR
Sbjct: 130 VTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAARELGRHGIR 189
Query: 175 TNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYI 234
            N+V P  I T M +   +     + +D I    P+G  G+P++V+ +VAFL    + YI
Sbjct: 190 CNSVLPGFIATPMTQKVPQ-----KVVDKITEMIPMGHLGDPEDVADVVAFLASEDSGYI 244
Query: 235 TG 236
           TG
Sbjct: 245 TG 246

>pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 113/246 (45%), Gaps = 26/246 (10%)
Query: 3   ALVTGGTRGIG----HATVEELAR--FGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVC 56
           ALV+GG RG G     A V E A+  FG I+    +      A    + +          
Sbjct: 10  ALVSGGARGXGASHVRAXVAEGAKVVFGDILDEEGKAXAAELADAARYVH---------L 60
Query: 57  DLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHL 116
           D++   Q +  ++T  + F G L++L+NNA I  +    D    +   +   N   VF  
Sbjct: 61  DVTQPAQWKAAVDTAVTAF-GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLG 119
Query: 117 SQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTN 176
            +      K +G GSI+ ISS+ G+ G  +   Y A K A+  LTK+ A E     IR N
Sbjct: 120 IRAVVKPXKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVN 179
Query: 177 TVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG 236
           ++ P ++KT            ++++     QT +GRA EP EVS+LV +L    +SY TG
Sbjct: 180 SIHPGLVKTPX----------TDWVPEDIFQTALGRAAEPVEVSNLVVYLASDESSYSTG 229
Query: 237 QIICVD 242
               VD
Sbjct: 230 AEFVVD 235

>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 111/244 (45%), Gaps = 13/244 (5%)
Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           TALVTG  +GIG A    LA  GA V     N     A       K   +   + D  S 
Sbjct: 8   TALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSV 67
Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           +     I+ +T    G ++IL+NNA+I       D+  +    +   N    F +++   
Sbjct: 68  KALFAEIQALT----GGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGT 123
Query: 122 PLFKASGN-GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
              +A+G  G ++ I+S     G P+++ Y A KG +   T+ LA E  K NI  N V P
Sbjct: 124 DQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELGKYNITANAVTP 183
Query: 181 WVIKTSMIK--PFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI 238
            +I++  +K  P  E     E L  +  +      G+P+ ++ +V+FL    A +ITGQ 
Sbjct: 184 GLIESDGVKASPHNEAFGFVEMLQAMKGK------GQPEHIADVVSFLASDDARWITGQT 237
Query: 239 ICVD 242
           + VD
Sbjct: 238 LNVD 241

>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261

Iteration: 1
 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 116/241 (48%), Gaps = 6/241 (2%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRN-QIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           ++TG + G+G +     A   A V    R+ + E ++ L E K  G +      D++   
Sbjct: 11  VITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVES 70
Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
               L+++    F GKL+++INNA +A    + +++  D + V  TN    F  S+ A  
Sbjct: 71  DVINLVQSAIKEF-GKLDVMINNAGLANPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIK 129
Query: 123 LFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
            F  +   G+++ +SSV      P    Y A KG M  +T+ LA E+A   IR N + P 
Sbjct: 130 YFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPG 189
Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
            I T +       PE    ++ +    P+G  GEP+E++++ A+L    ASY+TG  +  
Sbjct: 190 AINTPINAEKFADPEQRADVESM---IPMGYIGEPEEIAAVAAWLASSEASYVTGITLFA 246
Query: 242 D 242
           D
Sbjct: 247 D 247

>pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An Atypical Catalytic Center Length = 265

Iteration: 1
 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 117/248 (47%), Gaps = 10/248 (4%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSS 60
           A+VTGG+ GIG ATVE L   GA V  C+R+   L A     + +  G ++  SVCD+  
Sbjct: 11  AVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLD 70
Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
             Q     E       G  +IL+NNA    V    + T E  S      F SV H  +  
Sbjct: 71  ALQVRAFAEACERTL-GCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAF 129
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
            P  ++  + +IV ++S+   +  P +    A +  +  L +++A E+A   +R N +  
Sbjct: 130 LPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILI 189
Query: 181 WVIKTSMIKPFEEGP-----EGSEFLDGIAR--QTPIGRAGEPDEVSSLVAFLCLPAASY 233
            ++++   +   E       + +++   +AR  Q P+GR G+P E +  + FL  P ++Y
Sbjct: 190 GLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAILFLASPLSAY 249
Query: 234 ITGQIICV 241
            TG  I V
Sbjct: 250 TTGSHIDV 257

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 85.1 bits (209), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/253 (27%), Positives = 116/253 (45%), Gaps = 15/253 (5%)
Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF---KVTGSVCDL 58
           + ++TG + GIG +     A+ GA V    RN+  L+    +    G    K+   V D+
Sbjct: 28  SVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADV 87
Query: 59  SSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTV--DITAEDMSTVSSTNFESVFHL 116
           +    ++ +I T  + F GK++IL+NNA       T   D   E        NF++V  +
Sbjct: 88  TEASGQDDIINTTLAKF-GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEM 146
Query: 117 SQ-LAHPLFKASGNGSIVFISS-VGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIR 174
           +Q     L K    G IV +SS V G +       Y   K A++Q T+  A +  +  +R
Sbjct: 147 TQKTKEHLIKT--KGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGVR 204
Query: 175 TNTVAPWVIKT----SMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLC-LP 229
            N+V+P  + T    +M  P     +   F+       P+G  G+P+E+++++ FL    
Sbjct: 205 VNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLADRN 264
Query: 230 AASYITGQIICVD 242
            +SYI GQ I  D
Sbjct: 265 LSSYIIGQSIVAD 277

>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283

Iteration: 1
 Score = 85.1 bits (209), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 115/251 (45%), Gaps = 13/251 (5%)
Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE-LDARLHEWKNKGFKVTGSVCDLSS 60
            ALVTG  RGIG     EL R G  V     N  E  +  +   K  G        ++  
Sbjct: 31  VALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGV 90
Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
            E   ++ E    IF GKL+I+ +N+ +       D+T E+   V + N    F +++ A
Sbjct: 91  VEDIVRMFEEAVKIF-GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREA 149
Query: 121 HPLFKASGNGSIVFISSV-GGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
           +   +  G   ++ + S+ G  + +P  ++Y   KGA+    + +A + A   I  N VA
Sbjct: 150 YKHLEIGGR--LILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVA 207
Query: 180 PWVIKTSMIKPF--EEGPEG----SEFLDGIA--RQTPIGRAGEPDEVSSLVAFLCLPAA 231
           P  IKT M      E  P G    +E +D  A  + +P+ R G P +++ +V FL     
Sbjct: 208 PGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLASNDG 267
Query: 232 SYITGQIICVD 242
            ++TG++I +D
Sbjct: 268 GWVTGKVIGID 278

>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261

Iteration: 1
 Score = 85.1 bits (209), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 115/241 (47%), Gaps = 6/241 (2%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRN-QIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           ++TG + G+G +     A   A V    R+ + E ++ L E K  G +      D++   
Sbjct: 11  VITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVES 70
Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
               L+++    F GKL+++INNA +     + +++  D + V  TN    F  S+ A  
Sbjct: 71  DVINLVQSAIKEF-GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIK 129
Query: 123 LFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
            F  +   G+++ +SSV      P    Y A KG M  +TK LA E+A   IR N + P 
Sbjct: 130 YFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTKTLALEYAPKGIRVNNIGPG 189
Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
            I T +       PE    ++ +    P+G  GEP+E++++ A+L    ASY+TG  +  
Sbjct: 190 AINTPINAEKFADPEQRADVESM---IPMGYIGEPEEIAAVAAWLASSEASYVTGITLFA 246
Query: 242 D 242
           D
Sbjct: 247 D 247

>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283

Iteration: 1
 Score = 85.1 bits (209), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 115/251 (45%), Gaps = 13/251 (5%)
Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE-LDARLHEWKNKGFKVTGSVCDLSS 60
            ALVTG  RGIG     EL R G  V     N  E  +  +   K  G        ++  
Sbjct: 31  VALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGV 90
Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
            E   ++ E    IF GKL+I+ +N+ +       D+T E+   V + N    F +++ A
Sbjct: 91  VEDIVRMFEEAVKIF-GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREA 149
Query: 121 HPLFKASGNGSIVFISSV-GGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
           +   +  G   ++ + S+ G  + +P  ++Y   KGA+    + +A + A   I  N VA
Sbjct: 150 YKHLEIGGR--LILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVA 207
Query: 180 PWVIKTSMIKPF--EEGPEG----SEFLDGIA--RQTPIGRAGEPDEVSSLVAFLCLPAA 231
           P  IKT M      E  P G    +E +D  A  + +P+ R G P +++ +V FL     
Sbjct: 208 PGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLASNDG 267
Query: 232 SYITGQIICVD 242
            ++TG++I +D
Sbjct: 268 GWVTGKVIGID 278

>pdb|2Z1N|A Chain A, Crystal Structure Of Ape0912 From Aeropyrum Pernix K1 Length = 260

Iteration: 1
 Score = 85.1 bits (209), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 120/251 (47%), Gaps = 16/251 (6%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           A+VT G+ G+G A+  ELAR GA +   SRN+ +L+A      +    V+G+  D+ + +
Sbjct: 10  AVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASL---VSGAQVDIVAGD 66
Query: 63  QRE-----KLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLS 117
            RE     +L E    +  G  +IL+ +         +++  ED          S   + 
Sbjct: 67  IREPGDIDRLFEKARDL--GGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVG 124
Query: 118 QLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
           + A       G G +V+I SV  +R    ++L    +  +  + + LA E A   +  N 
Sbjct: 125 RRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAPHGVTVNA 184
Query: 178 VAPWVIKTSMIKPFEE------GPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAA 231
           V P +I T  ++   E      G    E L  +A + P+GR G+P+E++S+VAFL    A
Sbjct: 185 VLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVAFLASEKA 244
Query: 232 SYITGQIICVD 242
           S+ITG +I VD
Sbjct: 245 SFITGAVIPVD 255

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score = 84.7 bits (208), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 74/242 (30%), Positives = 113/242 (46%), Gaps = 10/242 (4%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQI-ELDARLHEWKNKGFKVTGSVCDLSSR 61
           A++TGG  GIG A  E  A  GA +         E +A +   +N G +V    CD+S  
Sbjct: 10  AVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAI---RNLGRRVLTVKCDVSQP 66
Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
              E   + V S F G+ +IL+NNA I  + P  ++T E        N +S F +++   
Sbjct: 67  GDVEAFGKQVISTF-GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFV 125
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P  K +G G I+ ++S      I + + Y + K A    T+ LA +  KD I  N +AP 
Sbjct: 126 PGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPS 185
Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQ-TPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
           +++T+      E    S   D +      I R   P +++   AFL    AS+ITGQ + 
Sbjct: 186 LVRTAT----TEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDASFITGQTLA 241
Query: 241 VD 242
           VD
Sbjct: 242 VD 243

>pdb|4IIU|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Escherichia Coli Strain Cft073 Complexed With Nadp+ At 2.1 A Resolution Length = 267

Iteration: 1
 Score = 84.3 bits (207), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 113/245 (46%), Gaps = 13/245 (5%)
Query: 2   TALVTGGTRGIGHATVEELAR--FGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLS 59
           + LVTG ++GIG A   +LA   F   VH   R+       L+     G        D++
Sbjct: 28  SVLVTGASKGIGRAIARQLAADGFNIGVHY-HRDAAGAQETLNAIVANGGNGRLLSFDVA 86
Query: 60  SREQ-REKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQ 118
           +REQ RE L   +     G    +++NA IA       ++ +D   V  TN +S +++ Q
Sbjct: 87  NREQCREVLEHEIAQ--HGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQ 144
Query: 119 -LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
               P+  A   G I+ +SSV GV G      Y A K  +   TK LA E AK  I  N 
Sbjct: 145 PCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYSAAKAGIIGATKALAIELAKRKITVNC 204
Query: 178 VAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ 237
           +AP +I T MI+  E        L       P+ R G+ +EV+ L ++L    A Y+T Q
Sbjct: 205 IAPGLIDTGMIEMEESA------LKEAMSMIPMKRMGQAEEVAGLASYLMSDIAGYVTRQ 258
Query: 238 IICVD 242
           +I ++
Sbjct: 259 VISIN 263

>pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad-acetone Length = 291

Iteration: 1
 Score = 84.3 bits (207), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 119/243 (48%), Gaps = 13/243 (5%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEW--KNKGFKVTGSVCDLSSR 61
           L+TGG  GIG A     A+ GA +     ++ E DA   +   + +G K      DLS  
Sbjct: 51  LITGGDSGIGRAVSIAFAKEGANIAIAYLDE-EGDANETKQYVEKEGVKCVLLPGDLSDE 109
Query: 62  EQREKLI-ETVTSIFQGKLNILINNAAIAFVKPTVD-ITAEDMSTVSSTNFESVFHLSQL 119
           +  + ++ ETV  +  G LNIL+NN A  + +  ++ ITAE +      N  S FH+++ 
Sbjct: 110 QHCKDIVQETVRQL--GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKA 167
Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
           A    K      I+  +S+    G  ++  Y A KGA+   T++L+    +  IR N VA
Sbjct: 168 ALSHLKQGD--VIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVA 225
Query: 180 PWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
           P  I T +I    +  + S+F        P+ R G+P E++    +L    +SY+TGQ+I
Sbjct: 226 PGPIWTPLIPSSFDEKKVSQF----GSNVPMQRPGQPYELAPAYVYLASSDSSYVTGQMI 281
Query: 240 CVD 242
            V+
Sbjct: 282 HVN 284

>pdb|3CTM|A Chain A, Crystal Structure Of A Carbonyl Reductase From Candida Parapsilosis With Anti-Prelog Stereo-Specificity Length = 279

Iteration: 1
 Score = 84.0 bits (206), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 113/244 (46%), Gaps = 11/244 (4%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           A VTG + GIG A  E  A+ GA V     +    +   H  K  G       C++S  +
Sbjct: 37  ASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPK 96
Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVK-PTVDITAED-MSTVSSTNFESVFHLSQLA 120
             E+ I      F G +++ + NA + + + P +D+   D  + + S +   V++ S   
Sbjct: 97  SVEETISQQEKDF-GTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNI 155
Query: 121 HPLFKASGNGSIVFISSVGG-VRGIPSVSL-YGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
             +FK +G GS++  SS+ G +  IP +   Y   K A   L K+LA EWA    R NT+
Sbjct: 156 GKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAIEWAP-FARVNTI 214
Query: 179 APWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI 238
           +P  I T  I  F      +++     + TP+GR G   E+     +L   A+++ TG  
Sbjct: 215 SPGYIDTD-ITDFASKDMKAKWW----QLTPLGREGLTQELVGGYLYLASNASTFTTGSD 269
Query: 239 ICVD 242
           + +D
Sbjct: 270 VVID 273

>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283

Iteration: 1
 Score = 84.0 bits (206), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 112/250 (44%), Gaps = 14/250 (5%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           AL+TG   GIG AT   LA  G  V    R + E++    E    G +      D+S   
Sbjct: 31  ALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDEL 90
Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFV-KPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           Q    +  +   F G L+I++ NA I  V  P  D+   +     + N    F    L  
Sbjct: 91  QXRNAVRDLVLKF-GHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTV 149
Query: 122 PLFKASGNGSIVFISSVGGVRGI--PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
           P  K  G G+IV +SS+ G R    P  + Y A K A   + + LA E  K +IR N V 
Sbjct: 150 PYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVC 209
Query: 180 PWVIKTSM-----IKPFEEGPEGSEFLDGIARQTPI--GRAGEPDEVSSLVAFLCLPAAS 232
           P  I+T++     ++  EE     E+  G   Q PI  G+ G  ++V+ L+ FL    A 
Sbjct: 210 PGAIETNISDNTKLRHEEETAIPVEWPKG---QVPITDGQPGRSEDVAELIRFLVSERAR 266
Query: 233 YITGQIICVD 242
           ++TG  + +D
Sbjct: 267 HVTGSPVWID 276

>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta- Hydroxysteroid Dehydrogenase And Possible Roles Of The Residues Conserved In Short-Chain Dehydrogenases Length = 253

Iteration: 1
 Score = 84.0 bits (206), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 63/187 (33%), Positives = 88/187 (47%), Gaps = 6/187 (3%)
Query: 56  CDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFH 115
            D++  E  ++++      F G ++ L+NNA I+        + E    V   N   VF 
Sbjct: 58  LDVTIEEDWQRVVAYAREEF-GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFI 116
Query: 116 LSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
             +   P  K +G GSIV ISS  G+ G+   S YGA K  +  L+K  A E   D IR 
Sbjct: 117 GMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRV 176
Query: 176 NTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT 235
           N+V P +  T M    E G    E   G    TP+GR GEP E++  V  L    +SY+T
Sbjct: 177 NSVHPGMTYTPMTA--ETGIRQGE---GNYPNTPMGRVGEPGEIAGAVVKLLSDTSSYVT 231
Query: 236 GQIICVD 242
           G  + VD
Sbjct: 232 GAELAVD 238

>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 84.0 bits (206), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 111/244 (45%), Gaps = 13/244 (5%)
Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           TALVTG  +GIG A    LA  GA V     N     A       K   +   + D  S 
Sbjct: 8   TALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSV 67
Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           +     I+ +T    G ++IL+NNA+I       D+  +    +   N    F +++   
Sbjct: 68  KALFAEIQALT----GGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGT 123
Query: 122 PLFKASGN-GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
              +A+G  G ++ I+S     G P+ + Y A KG +   T+ LA E  K NI  N V P
Sbjct: 124 DQXRAAGKAGRVISIASNTFFAGTPNXAAYVAAKGGVIGFTRALATELGKYNITANAVTP 183
Query: 181 WVIKTSMIK--PFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI 238
            +I++  +K  P  E     E L     Q   G+ G+P+ ++ +V+FL    A +ITGQ 
Sbjct: 184 GLIESDGVKASPHNEAFGFVEXL-----QAXKGK-GQPEHIADVVSFLASDDARWITGQT 237
Query: 239 ICVD 242
           + VD
Sbjct: 238 LNVD 241

>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266

Iteration: 1
 Score = 83.6 bits (205), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 116/244 (47%), Gaps = 17/244 (6%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIV--HTCSRNQI-ELDARLHEWKNKGFKVTGSVCDLS 59
           ALVTG T GIG A        GAIV  H    +++ E+ A L      G  V     +LS
Sbjct: 30  ALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL------GKDVFVFSANLS 83
Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLS-Q 118
            R+  ++L E      +G ++IL+NNA I      V +  +D   V + N  +   L+ +
Sbjct: 84  DRKSIKQLAEVAEREMEG-IDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRE 142
Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
           L H + +    G I+ I+S+ GV G P  + Y A K  +   +K LA E A  NI  N +
Sbjct: 143 LIHSMMRRR-YGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQEIASRNITVNCI 201
Query: 179 APWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI 238
           AP  IK++M     E  +     + I    P+ R G  +E++    +L    A+Y+TGQ 
Sbjct: 202 APGFIKSAMTDKLNEKQK-----EAIMAMIPMKRMGIGEEIAFATVYLASDEAAYLTGQT 256
Query: 239 ICVD 242
           + ++
Sbjct: 257 LHIN 260

>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 115/241 (47%), Gaps = 6/241 (2%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRN-QIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           ++TG + G+G +     A   A V    R+ + E ++ L E K  G +      D++   
Sbjct: 11  VITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVES 70
Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
               L+++    F GKL+++INNA +     + +++  D + V  TN    F  S+ A  
Sbjct: 71  DVINLVQSAIKEF-GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIK 129
Query: 123 LFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
            F  +   G+++ +SSV      P    Y A KG M  +T+ LA E+A   IR N + P 
Sbjct: 130 YFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPG 189
Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
            I T +       PE    ++ +    P+G  GEP+E++++ A+L    ASY+TG  +  
Sbjct: 190 AINTPINAEKFADPEQRADVESM---IPMGYIGEPEEIAAVAAWLASSEASYVTGITLFA 246
Query: 242 D 242
           D
Sbjct: 247 D 247

>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 115/241 (47%), Gaps = 6/241 (2%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRN-QIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           ++TG + G+G +     A   A V    R+ + E ++ L E K  G +      D++   
Sbjct: 11  VITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVES 70
Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
               L+++    F GKL+++INNA +     + +++  D + V  TN    F  S+ A  
Sbjct: 71  DVINLVQSAIKEF-GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIK 129
Query: 123 LFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
            F  +   G+++ +SSV      P    Y A KG M  +T+ LA E+A   IR N + P 
Sbjct: 130 YFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPG 189
Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
            I T +       PE    ++ +    P+G  GEP+E++++ A+L    ASY+TG  +  
Sbjct: 190 AINTPINAEKFADPEQRADVESM---IPMGYIGEPEEIAAVAAWLASSEASYVTGITLFA 246
Query: 242 D 242
           D
Sbjct: 247 D 247

>pdb|4IMR|A Chain A, Crystal Structure Of 3-oxoacyl (acyl-carrier-protein) Reductase (target Efi-506442) From Agrobacterium Tumefaciens C58 With Nadp Bound Length = 275

Iteration: 1
 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 115/243 (47%), Gaps = 13/243 (5%)
Query: 2   TALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIE-LDARLHEWKNKGFKVTGSVCDL 58
           TALVTG +RGIG A  E LA  GA  I+H         +  R+        ++ G   DL
Sbjct: 35  TALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAG---DL 91
Query: 59  SSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQ 118
           S       LIE   +I    ++IL+ NA+         +T  D++   + N  S   + Q
Sbjct: 92  SEAGAGTDLIERAEAI--APVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQ 149
Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
            A P   A   G +V I S+  +R    V+ Y A K A + L ++ A ++A DN+  NT+
Sbjct: 150 SALPKMVARKWGRVVSIGSINQLRPKSVVTAYAATKAAQHNLIQSQARDFAGDNVLLNTL 209
Query: 179 APWVIKTSM-IKPFEEGPEG-SEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG 236
           AP ++ T        + PEG  E++  +     +GRAG P+E+     FL   A S++TG
Sbjct: 210 APGLVDTDRNADRRAQDPEGWDEYVRTL---NWMGRAGRPEEMVGAALFLASEACSFMTG 266
Query: 237 QII 239
           + I
Sbjct: 267 ETI 269

>pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From Polaromonas Sp. Js666 In Nadp Bound Form Length = 271

Iteration: 1
 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/245 (31%), Positives = 114/245 (46%), Gaps = 13/245 (5%)
Query: 4   LVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           L+TGG+RGIG A+    AR G A+    + N    D  + + +  G +      D++   
Sbjct: 29  LITGGSRGIGAASALLAARQGYAVAVNYASNSAAADEVVRQIREAGGQALAVQADVAKER 88
Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVD-ITAEDMSTVSSTNFESVFHLSQLA- 120
           +     ETV +   G+L+ L+NNA +      VD IT E +      N    F  ++ A 
Sbjct: 89  EVLAXFETVDAQL-GRLSALVNNAGVVDQTTRVDGITLERLQRXFEINVFGSFLCAREAV 147
Query: 121 ---HPLFKASGNGSIVFISSVGGVRGIPSVSL-YGAYKGAMNQLTKNLACEWAKDNIRTN 176
                 +  SG GSIV +SS     G P   + Y A KGA++  T  LA E A + IR N
Sbjct: 148 KRXSTRYGGSG-GSIVNVSSAAARLGSPGQYVDYAAAKGAIDTFTLGLAKEVATEGIRVN 206
Query: 177 TVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG 236
            V P +I+T +      G   +   D +A Q P  RAG   EV+  + +L    ASY TG
Sbjct: 207 AVRPGIIETDI---HASGGLPNRARD-VAPQVPXQRAGTAREVAEAIVWLLGDQASYTTG 262
Query: 237 QIICV 241
            ++ V
Sbjct: 263 ALLDV 267

>pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate 3-Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506435) With Bound Nadp Length = 247

Iteration: 1
 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 108/245 (44%), Gaps = 20/245 (8%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           ALVTG   G+G A    LA  GA V   +R     D  L      G   +  + D +   
Sbjct: 12  ALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDGGNASALLIDFADP- 68
Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQ-LAH 121
                +    S      +IL+NNA I     +V+ +  D   V   N +++F  +Q  A 
Sbjct: 69  -----LAAKDSFTDAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAK 123
Query: 122 PLFKASGNGSIVFISSV----GGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
            L     +G +V I+S+    GG+R +PS   Y A K  +  LTK LA EWA   I  N 
Sbjct: 124 ELLAKGRSGKVVNIASLLSFQGGIR-VPS---YTAAKHGVAGLTKLLANEWAAKGINVNA 179
Query: 178 VAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ 237
           +AP  I+T+  +        ++    I  + P GR G  ++++    FL   AA Y+ G 
Sbjct: 180 IAPGYIETNNTEALRADAARNK---AILERIPAGRWGHSEDIAGAAVFLSSAAADYVHGA 236
Query: 238 IICVD 242
           I+ VD
Sbjct: 237 ILNVD 241

>pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella Enterica Length = 294

Iteration: 1
 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 116/247 (46%), Gaps = 19/247 (7%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDAR-----LHEWKNKGFKVTGSVCD 57
           ALVTGG  GIG A     AR GA V        E DA+     + E   K   + G + D
Sbjct: 52  ALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSD 111
Query: 58  LS-SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTV-DITAEDMSTVSSTNFESVFH 115
            S +R    K  E +     G L+IL   A      P + D+T+E      + N  ++F 
Sbjct: 112 ESFARSLVHKAREAL-----GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFW 166
Query: 116 LSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
           ++Q A PL       SI+  SS+   +  P +  Y A K A+   ++ LA + A+  IR 
Sbjct: 167 ITQEAIPLLPK--GASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRV 224
Query: 176 NTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT 235
           N VAP  I T++      G +  + +    +QTP+ RAG+P E++ +  +L    +SY+T
Sbjct: 225 NIVAPGPIWTALQI---SGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVT 281
Query: 236 GQI--IC 240
            ++  +C
Sbjct: 282 AEVHGVC 288

>pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad+ Length = 291

Iteration: 1
 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 117/243 (48%), Gaps = 13/243 (5%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEW--KNKGFKVTGSVCDLSSR 61
           L+TGG  GIG A     A+ GA +     ++ E DA   +   + +G K      DLS  
Sbjct: 51  LITGGDSGIGRAVSIAFAKEGANIAIAYLDE-EGDANETKQYVEKEGVKCVLLPGDLSDE 109
Query: 62  EQREKLI-ETVTSIFQGKLNILINNAAIAFVKPTVD-ITAEDMSTVSSTNFESVFHLSQL 119
           +  + ++ ETV  +  G LNIL+NN A  + +  ++ ITAE +      N  S FH+++ 
Sbjct: 110 QHCKDIVQETVRQL--GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKA 167
Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
           A    K      I+  +S+    G  ++  Y A KGA+   T++L+    +  IR N VA
Sbjct: 168 ALSHLKQGD--VIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVA 225
Query: 180 PWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
           P  I T +I    +  + S+F        P  R G+P E++    +L    +SY+TGQ I
Sbjct: 226 PGPIWTPLIPSSFDEKKVSQF----GSNVPXQRPGQPYELAPAYVYLASSDSSYVTGQXI 281
Query: 240 CVD 242
            V+
Sbjct: 282 HVN 284

>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (aldt) In Ligand-free Form Length = 264

Iteration: 1
 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 115/245 (46%), Gaps = 19/245 (7%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQ 63
           +VTG + GIG A  E     G+ V         +D  +H+     +      CD+++ +Q
Sbjct: 12  IVTGASMGIGRAIAERFVDEGSKV---------IDLSIHDPGEAKYDHIE--CDVTNPDQ 60
Query: 64  REKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPL 123
            +  I+ +   + G +++L+NNA I        ++  +   +   N    ++ S+ A P 
Sbjct: 61  VKASIDHIFKEY-GSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPY 119
Query: 124 FKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVI 183
              S + SIV ISSV       + S Y   K A+  LTK++A ++A   +R N V P  I
Sbjct: 120 MIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAP-LLRCNAVCPATI 178
Query: 184 KTSMIKPFEEGPEGSEFL------DGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ 237
            T +++   E   GS+ +           + P+ R G+P EV+S VAFL    AS+ITG 
Sbjct: 179 DTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLASREASFITGT 238
Query: 238 IICVD 242
            + VD
Sbjct: 239 CLYVD 243

>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257

Iteration: 1
 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 115/245 (46%), Gaps = 19/245 (7%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQ 63
           +VTG + GIG A  E     G+ V         +D  +H+     +      CD+++ +Q
Sbjct: 19  IVTGASMGIGRAIAERFVDEGSKV---------IDLSIHDPGEAKYDHIE--CDVTNPDQ 67
Query: 64  REKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPL 123
            +  I+ +   + G +++L+NNA I        ++  +   +   N    ++ S+ A P 
Sbjct: 68  VKASIDHIFKEY-GSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPY 126
Query: 124 FKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVI 183
              S + SIV ISSV       + S Y   K A+  LTK++A ++A   +R N V P  I
Sbjct: 127 MIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAP-LLRCNAVCPATI 185
Query: 184 KTSMIKPFEEGPEGSEFL------DGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ 237
            T +++   E   GS+ +           + P+ R G+P EV+S VAFL    AS+ITG 
Sbjct: 186 DTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLASREASFITGT 245
Query: 238 IICVD 242
            + VD
Sbjct: 246 CLYVD 250

>pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259

Iteration: 1
 Score = 81.6 bits (200), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 108/249 (43%), Gaps = 13/249 (5%)
Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           +AL+TG  RGIG A  E   R GA V       I+++         G        D++ +
Sbjct: 10  SALITGSARGIGRAFAEAYVREGATVAIA---DIDIERARQAAAEIGPAAYAVQXDVTRQ 66
Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFE-SVFHLSQLA 120
           +  +  I   T    G L+IL+NNAA+  + P V+IT E    + + N   ++F L   A
Sbjct: 67  DSIDAAI-AATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAA 125
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
                    G I+  +S  G RG   V++Y A K A+  LT++   +  K  I  N +AP
Sbjct: 126 RQXIAQGRGGKIINXASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAP 185
Query: 181 WVIK-------TSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASY 233
            V+         ++   +E  P G E    +    P GR G  ++++    FL    + Y
Sbjct: 186 GVVDGEHWDGVDALFARYENRPRG-EKKRLVGEAVPFGRXGTAEDLTGXAIFLASAESDY 244
Query: 234 ITGQIICVD 242
           I  Q   VD
Sbjct: 245 IVSQTYNVD 253

>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250

Iteration: 1
 Score = 81.3 bits (199), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 106/247 (42%), Gaps = 14/247 (5%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTC--SRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
           A+VTG + G G A        G  V     S   +E  AR H W     KV     D++ 
Sbjct: 5   AIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTH-WHAYADKVLRVRADVAD 63
Query: 61  REQREKLIETVTSIFQGKLNILINNAAI-----AFVKPTVDITAEDMSTVSSTNFESVFH 115
                  I      F G +++L+NNA I     A V  T  +  E    V + N   +F 
Sbjct: 64  EGDVNAAIAATMEQF-GAIDVLVNNAGITGNSEAGVLHTTPV--EQFDKVMAVNVRGIFL 120
Query: 116 LSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
             +   P     G G IV I+SV  +   P  S Y   KGA+ QLTK++A ++A   IR 
Sbjct: 121 GCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRC 180
Query: 176 NTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT 235
           N V P +I+T M +   + P   E  D +  + P    G   +V+  V FL    A+Y+ 
Sbjct: 181 NAVCPGMIETPMTQWRLDQP---ELRDQVLARIPQKEIGTAAQVADAVMFLAGEDATYVN 237
Query: 236 GQIICVD 242
           G  + +D
Sbjct: 238 GAALVMD 244

>pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein From Sinorhizobium Meliloti 1021 In Complex With Nadp Length = 255

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 105/242 (43%), Gaps = 10/242 (4%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           A+V GGT G G ATV  L   GA V    RN+  +     E+  +   +   + DL+   
Sbjct: 11  AIVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEI- 69
Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
               ++        G +++L  NA ++ ++P   ++        + N +  F   Q   P
Sbjct: 70  ---AVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTP 126
Query: 123 LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWV 182
           L +    GSIVF SSV    G P  S+Y A K A+      LA E     IR N+V+P  
Sbjct: 127 LIRE--GGSIVFTSSVADEGGHPGXSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGF 184
Query: 183 IKTSM--IKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
           I T    +    E  E +EF       TP  R G  DEV+  V FL    A++ TG  + 
Sbjct: 185 IDTPTKGVAGITE-AERAEFKTLGDNITPXKRNGTADEVARAVLFLAFE-ATFTTGAKLA 242
Query: 241 VD 242
           VD
Sbjct: 243 VD 244

>pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 254

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 105/242 (43%), Gaps = 10/242 (4%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           A+V GGT G G ATV  L   GA V    RN+  +     E+  +   +   + DL+   
Sbjct: 10  AIVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEI- 68
Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
               ++        G +++L  NA ++ ++P   ++        + N +  F   Q   P
Sbjct: 69  ---AVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTP 125
Query: 123 LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWV 182
           L +    GSIVF SSV    G P  S+Y A K A+      LA E     IR N+V+P  
Sbjct: 126 LIRE--GGSIVFTSSVADEGGHPGXSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGF 183
Query: 183 IKTSM--IKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
           I T    +    E  E +EF       TP  R G  DEV+  V FL    A++ TG  + 
Sbjct: 184 IDTPTKGVAGITE-AERAEFKTLGDNITPXKRNGTADEVARAVLFLAFE-ATFTTGAKLA 241
Query: 241 VD 242
           VD
Sbjct: 242 VD 243

>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/249 (28%), Positives = 107/249 (42%), Gaps = 10/249 (4%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSV--CDLSS 60
           A+VTG T GIG A   ELA+ GA V      Q E   R        F V       DLS 
Sbjct: 7   AVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKFGVKAYYLNADLSD 66
Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
            +     I        G L+IL+NNA I    P  +   +  + + + N  +VFH +  A
Sbjct: 67  AQATRDFIAKAAEAL-GGLDILVNNAGIQHTAPIEEFPVDKWNAIIALNLSAVFHGTAAA 125
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
            P+ +  G G I+ I+S  G+    + S Y A K  +  LTK  A E A   I  N + P
Sbjct: 126 LPIMQKQGWGRIINIASAHGLVASVNKSAYVAAKHGVVGLTKVTALENAGKGITCNAICP 185
Query: 181 WVIKTSMIKPFEEGPEGSEFLD-------GIARQTPIGRAGEPDEVSSLVAFLCLPAASY 233
             ++T +++   E     + +D        +A + P  +   P+++     FL   AA  
Sbjct: 186 GWVRTPLVEKQIEAISQQKGIDIEAAARELLAEKQPSLQFVTPEQLGGAAVFLSSAAADQ 245
Query: 234 ITGQIICVD 242
           +TG  + +D
Sbjct: 246 MTGTTLSLD 254

>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 112/267 (41%), Gaps = 37/267 (13%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTC---------------SRNQIELDARLHEWKNK 47
           A +TG  RG G +    LA  GA +  C               S   ++  ARL E  ++
Sbjct: 18  AFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVE--DQ 75
Query: 48  GFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSS 107
           G K    V D+       +L+      F G+L++++ NA +       ++T E   TV  
Sbjct: 76  GRKALTRVLDVRDDAALRELVADGMEQF-GRLDVVVANAGVLSWGRVWELTDEQWDTVIG 134
Query: 108 TNFESVFHLSQLAHPLFKASGNG-SIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLAC 166
            N    +   +   P    +GNG SIV +SS  G++  P    Y A K  +  LT  LA 
Sbjct: 135 VNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTALTNTLAI 194
Query: 167 EWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEP---------- 216
           E  +  IR N++ P+ ++T MI+P          ++  AR      +  P          
Sbjct: 195 ELGEYGIRVNSIHPYSVETPMIEP-------EAMMEIFARHPSFVHSFPPMPVQPNGFMT 247
Query: 217 -DEVSSLVAFLCLPAASYITGQIICVD 242
            DEV+ +VA+L    +  +TG  I VD
Sbjct: 248 ADEVADVVAWLAGDGSGTLTGTQIPVD 274

>pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium Smegmatis Length = 454

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 110/243 (45%), Gaps = 16/243 (6%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVC--DLSS 60
           A+VTG  RGIG    E  AR GA V       I++D    + K    KV G+    D+++
Sbjct: 216 AVVTGAARGIGATIAEVFARDGATVVA-----IDVDGAAEDLKRVADKVGGTALTLDVTA 270
Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
            +  +K+   VT    GK++IL+NNA I   K   ++  +    V + N  +   L++  
Sbjct: 271 DDAVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGL 330
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
                    G ++ +SS+ G+ G    + Y   K  M  L + LA   A   I  N VAP
Sbjct: 331 VGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKAGMIGLAEALAPVLADKGITINAVAP 390
Query: 181 WVIKTSMIK--PFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI 238
             I+T M +  P      G        R   + + G+P +V+ L+A+   PA++ +TG  
Sbjct: 391 GFIETKMTEAIPLATREVGR-------RLNSLFQGGQPVDVAELIAYFASPASNAVTGNT 443
Query: 239 ICV 241
           I V
Sbjct: 444 IRV 446

>pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 101/244 (41%), Gaps = 8/244 (3%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           A+VTG + GIG A     AR GA V   +RN   L     E    G +      D+    
Sbjct: 11  AIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEA 70
Query: 63  QREKLIETVTSIFQGKLNILINNA-AIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
             E L+E     F G L+   NNA A+  +     ++ E       TN  S F  ++   
Sbjct: 71  LHEALVELAVRRF-GGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQV 129
Query: 122 PLFKASGNGSIVFISS-VGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
           P   A G GS+ F SS VG   G   V+ Y A K  +  L + LA E     IR N + P
Sbjct: 130 PAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLP 189
Query: 181 WVIKT--SMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI 238
               T  +        PE   F++G+     I R   P+E++    +L    AS++TG  
Sbjct: 190 GGTDTPANFANLPGAAPETRGFVEGLHALKRIAR---PEEIAEAALYLASDGASFVTGAA 246
Query: 239 ICVD 242
           +  D
Sbjct: 247 LLAD 250

>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid Dehydrogenase By A Licorice-Derived Steroidal Inhibitor Length = 254

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/188 (33%), Positives = 88/188 (46%), Gaps = 7/188 (3%)
Query: 56  CDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFH 115
            D++  E  ++++      F G ++ L+NNA I+        + E    V   N   VF 
Sbjct: 58  LDVTIEEDWQRVVAYAREEF-GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFI 116
Query: 116 LSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
             +   P  K +G GSIV ISS  G+ G+   S YGA K  +  L+K  A E   D IR 
Sbjct: 117 GMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRV 176
Query: 176 NTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAG-EPDEVSSLVAFLCLPAASYI 234
           N+V P +  T M    E G    E   G    TP+GR G EP E++  V  L    +SY+
Sbjct: 177 NSVHPGMTYTPMTA--ETGIRQGE---GNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYV 231
Query: 235 TGQIICVD 242
           TG  + VD
Sbjct: 232 TGAELAVD 239

>pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase- Reductase From Mycobacterium Tuberculosis Length = 277

Iteration: 1
 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 104/238 (43%), Gaps = 10/238 (4%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           A+VTG   GIG A    LA  G   H    +     A     K  G        D+S  +
Sbjct: 32  AIVTGAGAGIGLAVARRLADEG--CHVLCADIDGDAADAAATK-IGCGAAACRVDVSDEQ 88
Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
           Q   +++   + F G ++ L+ NA +  +   +D T ED   V + N    +  ++ A P
Sbjct: 89  QIIAMVDACVAAF-GGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAP 147
Query: 123 LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWV 182
                G G+IV +SS+ G   +     YG  K  + QL++  A E     IR+NT+ P  
Sbjct: 148 RMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAF 207
Query: 183 IKTSMIKPFEEGPEGSEFLDG----IARQTPIGRAGEPDEVSSLVAFLCLPAASYITG 236
           + T M +      +G+    G    IAR    GR   P+E++ +V FL    AS ITG
Sbjct: 208 VDTPMQQTAMAMFDGALGAGGARSMIARLQ--GRMAAPEEMAGIVVFLLSDDASMITG 263

>pdb|3UXY|A Chain A, The Crystal Structure Of Short Chain Dehydrogenase From Rhodobacter Sphaeroides Length = 266

Iteration: 1
 Score = 77.8 bits (190), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 87/168 (51%), Gaps = 2/168 (1%)
Query: 77  GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFIS 136
           G+L+I++NNA +       + T  D S     N E+ F + + A PL  A+G G+IV ++
Sbjct: 93  GRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLXAAAGGGAIVNVA 152
Query: 137 SVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP--FEEG 194
           S  G+R  P  +LY   K A+  LT+    + A   IR N V P  + T  ++    + G
Sbjct: 153 SCWGLRPGPGHALYCLTKAALASLTQCXGXDHAPQGIRINAVCPNEVNTPXLRTGFAKRG 212
Query: 195 PEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 242
            +    +  + R  P+GR  EP++++ +V FL   AA Y+ G ++ V+
Sbjct: 213 FDPDRAVAELGRTVPLGRIAEPEDIADVVLFLASDAARYLCGSLVEVN 260

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 77.0 bits (188), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 111/239 (46%), Gaps = 17/239 (7%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           A+VTG +RGIG A   +L   GA V   +R+  +L A   E    G +     CDLS  +
Sbjct: 32  AVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSD 91
Query: 63  QREKLIETVTSIFQGKLNILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
                   V +   G+ ++L+NNA +  F  P   +   +   + + N ++ + L +   
Sbjct: 92  AIAAFATGVLAA-HGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFA 150
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P   A+  G I+ ISS+ G   +   + Y A K  +N L  + A E  +  +R + VAP 
Sbjct: 151 PAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPG 210
Query: 182 VIKTSMIKPFEEGPEGSEFLDGI-ARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
            ++T             EF  G+ A+++ +G A EPD+++ +VA L   A      +++
Sbjct: 211 SVRT-------------EFGVGLSAKKSALG-AIEPDDIADVVALLATQADQSFISEVL 255

>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 96/192 (50%), Gaps = 7/192 (3%)
Query: 2   TALVTGGTRGIGHATVEEL--ARFGAIVHTCSRNQIELDARLHEWKNKGF---KVTGSVC 56
           T L+TG + GIG AT  E   A  G +    +  ++E    L +  ++ F   KV  +  
Sbjct: 35  TVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQL 94
Query: 57  DLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTV-DITAEDMSTVSSTNFESVFH 115
           D++  E+ +  IE +   F+  ++IL+NNA  A     V  I  ED+  V  TN  ++ +
Sbjct: 95  DITQAEKIKPFIENLPQEFK-DIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALIN 153
Query: 116 LSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
           ++Q   P+F+A  +G IV + S+ G    P+ S+Y A K A+   T +L  E     IR 
Sbjct: 154 ITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTDSLRKELINTKIRV 213
Query: 176 NTVAPWVIKTSM 187
             +AP +++T  
Sbjct: 214 ILIAPGLVETEF 225

>pdb|1W6U|A Chain A, Structure Of Human Decr Ternary Complex Length = 302

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 101/225 (44%), Gaps = 5/225 (2%)
Query: 20  LARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSSREQREKLIETVTSIFQGK 78
           L+  GA     SR    L A   +  ++ G KV    CD+   +  +  +  +  +  G 
Sbjct: 46  LSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV-AGH 104
Query: 79  LNILINNAAIAFVKPTVDITAEDMSTVSSTNFE-SVFHLSQLAHPLFKASGNGSIVFISS 137
            NI+INNAA  F+ PT  ++     T++      + F   ++   L KA    + + I++
Sbjct: 105 PNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITT 164
Query: 138 VGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEG 197
           +    G   V    + K  +  ++K+LA EW K  +R N + P  IKT     F      
Sbjct: 165 IYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTK--GAFSRLDPT 222
Query: 198 SEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 242
             F   +  + P GR G  +E+++L AFLC   AS+I G +I  D
Sbjct: 223 GTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWINGAVIKFD 267

>pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 79/253 (31%), Positives = 113/253 (44%), Gaps = 29/253 (11%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHT-CSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           LVTGG+RGIG A     AR G  V    + N+   DA +      G +      D+ +  
Sbjct: 30  LVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAA 89
Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVD-ITAEDMSTVSSTNF--------ESV 113
                   V   F G+L+ L+NNA I      VD  + E +      N         E+V
Sbjct: 90  DIAAXFSAVDRQF-GRLDGLVNNAGIVDYPQRVDEXSVERIERXLRVNVTGSILCAAEAV 148
Query: 114 FHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSL-YGAYKGAMNQLTKNLACEWAKDN 172
              S+L    +   G G+IV +SS   + G  +  + Y A K A++  T  LA E A + 
Sbjct: 149 RRXSRL----YSGQG-GAIVNVSSXAAILGSATQYVDYAASKAAIDTFTIGLAREVAAEG 203
Query: 173 IRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQ----TPIGRAGEPDEVSSLVAFLCL 228
           IR N V P +I+T +          S  L   AR+     P  RAG P+EV+  + +L  
Sbjct: 204 IRVNAVRPGIIETDL--------HASGGLPDRAREXAPSVPXQRAGXPEEVADAILYLLS 255
Query: 229 PAASYITGQIICV 241
           P+ASY+TG I+ V
Sbjct: 256 PSASYVTGSILNV 268

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 107/252 (42%), Gaps = 16/252 (6%)
Query: 3   ALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELD-ARLHEWKNKGFKVTGSVCDLSS 60
           A+VTG T GIG      LA  GA IV     +  E++  R       G KV     DLS 
Sbjct: 7   AVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSK 66
Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
            E    L++       G+++IL+NNA I       D   E    + + N  +VFH +  A
Sbjct: 67  GEAVRGLVDNAVRQM-GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAA 125
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
            P  K  G G I+ I+S  G+    + S Y A K  +   TK  A E A   I  N + P
Sbjct: 126 LPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICP 185
Query: 181 WVIKTSMIKP----------FEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPA 230
             ++T +++            ++     E L   + + P  +   P+++     FL   A
Sbjct: 186 GWVRTPLVEKQISALAEKNGVDQETAARELL---SEKQPSLQFVTPEQLGGTAVFLASDA 242
Query: 231 ASYITGQIICVD 242
           A+ ITG  + VD
Sbjct: 243 AAQITGTTVSVD 254

>pdb|4E4Y|A Chain A, The Crystal Structure Of A Short Chain Dehydrogenase Family Protein From Francisella Tularensis Subsp. Tularensis Schu S4 Length = 244

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 113/253 (44%), Gaps = 36/253 (14%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQ 63
           LVTGG++GIG A VE L      +   +   I +D +   +  +  K   +  DL+ ++ 
Sbjct: 8   LVTGGSKGIGKAVVELL------LQNKNHTVINIDIQ-QSFSAENLKFIKA--DLTKQQD 58
Query: 64  REKLIETVTSI-FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTN-FESVFHLSQLAH 121
              +++ + ++ F G    +  NA I       DI  E +  V   N + S++ +  L +
Sbjct: 59  ITNVLDIIKNVSFDG----IFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLEN 114
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
            L       SIVF  S       P+   Y   KGA+ Q TK+LA + AK  IR NTV P 
Sbjct: 115 NL---KVGASIVFNGSDQCFIAKPNSFAYTLSKGAIAQXTKSLALDLAKYQIRVNTVCPG 171
Query: 182 VIKTSMIK------------PFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLP 229
            + T + +             F+E  +  E      ++ P+ R  +P E++ LV FL   
Sbjct: 172 TVDTDLYRNLIQKYANNVGISFDEAQKQEE------KEFPLNRIAQPQEIAELVIFLLSD 225
Query: 230 AASYITGQIICVD 242
            + + TG +I +D
Sbjct: 226 KSKFXTGGLIPID 238

>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 108/249 (43%), Gaps = 12/249 (4%)
Query: 3   ALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           ALVTG  RGIG A    L R GA +V   + +  + +  + E K  G        D+   
Sbjct: 21  ALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQV 80
Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
            +  KL +   + F G L+I ++N+ +       D+T E+   V S N    F +++ A+
Sbjct: 81  PEIVKLFDQAVAHF-GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAY 139
Query: 122 PLFKASGNGSIVFISS-VGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
                +  G IV  SS       +P  SLY   KGA++   +  + +     I  N VAP
Sbjct: 140 RHL--TEGGRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAP 197
Query: 181 WVIKTSMIKPFEEG--PEGSEFL-----DGIARQTPIGRAGEPDEVSSLVAFLCLPAASY 233
               T M         P G+ +         A  +P+ R G P +V+++V FL      +
Sbjct: 198 GGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVVGFLVSKEGEW 257
Query: 234 ITGQIICVD 242
           + G+++ +D
Sbjct: 258 VNGKVLTLD 266

>pdb|2A4K|A Chain A, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus Thermophilus Tt0137 Length = 263

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 110/241 (45%), Gaps = 12/241 (4%)
Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           T LVTG   GIG A ++  AR GA +    R +  L   +        +    V D+S  
Sbjct: 8   TILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAV---AALEAEAIAVVADVSDP 64
Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           +  E +       F G+L+ + + A +A    + ++  E    V   N    F +++ A 
Sbjct: 65  KAVEAVFAEALEEF-GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAG 123
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
            + +    GS+V   SV G+ G   ++ Y A K  +  L + LA E A+  +R N + P 
Sbjct: 124 EVLEE--GGSLVLTGSVAGL-GAFGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPG 180
Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
           +I+T M       P   E   G    +P+GRAG P+EV+    FL    ++YITGQ + V
Sbjct: 181 LIQTPMTAGLP--PWAWEQEVG---ASPLGRAGRPEEVAQAALFLLSEESAYITGQALYV 235
Query: 242 D 242
           D
Sbjct: 236 D 236

>pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh Length = 454

Iteration: 1
 Score = 75.1 bits (183), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 111/252 (44%), Gaps = 34/252 (13%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVC--DLSS 60
           A+VTG  RGIG    E  AR GA  H  +   I++++          KV G+    D+++
Sbjct: 216 AIVTGAARGIGATIAEVFARDGA--HVVA---IDVESAAENLAETASKVGGTALWLDVTA 270
Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
            +  +K+ E +     GK +IL+NNA I   K   ++       V + N  +   L++  
Sbjct: 271 DDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLAPLRLTE-- 328
Query: 121 HPLFKASGNGSI------VFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIR 174
                  GNGSI      + +SS+ G+ G    + Y   K  M  +T+ LA   A   I 
Sbjct: 329 ----GLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKGIT 384
Query: 175 TNTVAPWVIKTSMIKPF-----EEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLP 229
            N VAP  I+T M         E G   +  L G          G+P +V+  +A+   P
Sbjct: 385 INAVAPGFIETQMTAAIPLATREVGRRLNSLLQG----------GQPVDVAEAIAYFASP 434
Query: 230 AASYITGQIICV 241
           A++ +TG +I V
Sbjct: 435 ASNAVTGNVIRV 446

>pdb|3T7C|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nad Length = 299

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 123/270 (45%), Gaps = 37/270 (13%)
Query: 3   ALVTGGTRGIGHATVEELARFGA---IVHTCSR---------NQIELDARLHEWKNKGFK 50
           A +TG  RG G +    LAR GA    +  C +            +L   + + +  G +
Sbjct: 31  AFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRR 90
Query: 51  VTGSVCDLSSREQREKLIET-VTSIFQGKLNILINNAAIAFVKPTVD----ITAEDMSTV 105
           +  S  D+   +  +  ++  VT +  G+L+I++ NAA+A     ++     T  DM  V
Sbjct: 91  IIASQVDVRDFDAMQAAVDDGVTQL--GRLDIVLANAALASEGTRLNRMDPKTWRDMIDV 148
Query: 106 SSTNFESVFHLSQLAHP-LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNL 164
              N    +  +++A P +      GSIVF SS+GG+RG  ++  Y A K  ++ L + +
Sbjct: 149 ---NLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHGLMRTM 205
Query: 165 ACEWAKDNIRTNTVAPWVIKTSMI---------KPFEEGPEGSEFLDGIARQT---PIGR 212
           A E    NIR N V P  + T M+         +P  E P   +F    +RQ    PI  
Sbjct: 206 ALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDF-QVASRQMHVLPIPY 264
Query: 213 AGEPDEVSSLVAFLCLPAASYITGQIICVD 242
             EP ++S+ + FL    A YITG  + VD
Sbjct: 265 V-EPADISNAILFLVSDDARYITGVSLPVD 293

>pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom Resolution Length = 462

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 111/252 (44%), Gaps = 34/252 (13%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVC--DLSS 60
           A+VTG  RGIG    E  AR GA  H  +   I++++          KV G+    D+++
Sbjct: 224 AIVTGAARGIGATIAEVFARDGA--HVVA---IDVESAAENLAETASKVGGTALWLDVTA 278
Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
            +  +K+ E +     GK +IL+NNA I   K   ++       V + N  +   L++  
Sbjct: 279 DDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLAPLRLTE-- 336
Query: 121 HPLFKASGNGSI------VFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIR 174
                  GNGSI      + +SS+ G+ G    + Y   K  M  +T+ LA   A   I 
Sbjct: 337 ----GLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKGIT 392
Query: 175 TNTVAPWVIKTSMIKPF-----EEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLP 229
            N VAP  I+T M         E G   +  L G          G+P +V+  +A+   P
Sbjct: 393 INAVAPGFIETQMTAAIPLATREVGRRLNSLLQG----------GQPVDVAEAIAYFASP 442
Query: 230 AASYITGQIICV 241
           A++ +TG +I V
Sbjct: 443 ASNAVTGNVIRV 454

>pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Tuberculosis Length = 475

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 111/252 (44%), Gaps = 34/252 (13%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVC--DLSS 60
           A+VTG  RGIG    E  AR GA  H  +   I++++          KV G+    D+++
Sbjct: 237 AIVTGAARGIGATIAEVFARDGA--HVVA---IDVESAAENLAETASKVGGTALWLDVTA 291
Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
            +  +K+ E +     GK +IL+NNA I   K   ++       V + N  +   L++  
Sbjct: 292 DDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLAPLRLTE-- 349
Query: 121 HPLFKASGNGSI------VFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIR 174
                  GNGSI      + +SS+ G+ G    + Y   K  M  +T+ LA   A   I 
Sbjct: 350 ----GLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKGIT 405
Query: 175 TNTVAPWVIKTSMIKPF-----EEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLP 229
            N VAP  I+T M         E G   +  L G          G+P +V+  +A+   P
Sbjct: 406 INAVAPGFIETQMTAAIPLATREVGRRLNSLLQG----------GQPVDVAEAIAYFASP 455
Query: 230 AASYITGQIICV 241
           A++ +TG +I V
Sbjct: 456 ASNAVTGNVIRV 467

>pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 2.5 Angstrom Resolution Length = 432

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 111/252 (44%), Gaps = 34/252 (13%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVC--DLSS 60
           A+VTG  RGIG    E  AR GA  H  +   I++++          KV G+    D+++
Sbjct: 200 AIVTGAARGIGATIAEVFARDGA--HVVA---IDVESAAENLAETASKVGGTALWLDVTA 254
Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
            +  +K+ E +     GK +IL+NNA I   K   ++       V + N  +   L++  
Sbjct: 255 DDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLAPLRLTE-- 312
Query: 121 HPLFKASGNGSI------VFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIR 174
                  GNGSI      + +SS+ G+ G    + Y   K  M  +T+ LA   A   I 
Sbjct: 313 ----GLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKGIT 368
Query: 175 TNTVAPWVIKTSMIKPF-----EEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLP 229
            N VAP  I+T M         E G   +  L G          G+P +V+  +A+   P
Sbjct: 369 INAVAPGFIETQMTAAIPLATREVGRRLNSLLQG----------GQPVDVAEAIAYFASP 418
Query: 230 AASYITGQIICV 241
           A++ +TG +I V
Sbjct: 419 ASNAVTGNVIRV 430

>pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex Length = 446

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 111/252 (44%), Gaps = 34/252 (13%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVC--DLSS 60
           A+VTG  RGIG    E  AR GA  H  +   I++++          KV G+    D+++
Sbjct: 208 AIVTGAARGIGATIAEVFARDGA--HVVA---IDVESAAENLAETASKVGGTALWLDVTA 262
Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
            +  +K+ E +     GK +IL+NNA I   K   ++       V + N  +   L++  
Sbjct: 263 DDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLAPLRLTE-- 320
Query: 121 HPLFKASGNGSI------VFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIR 174
                  GNGSI      + +SS+ G+ G    + Y   K  M  +T+ LA   A   I 
Sbjct: 321 ----GLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKGIT 376
Query: 175 TNTVAPWVIKTSMIKPF-----EEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLP 229
            N VAP  I+T M         E G   +  L G          G+P +V+  +A+   P
Sbjct: 377 INAVAPGFIETQMTAAIPLATREVGRRLNSLLQG----------GQPVDVAEAIAYFASP 426
Query: 230 AASYITGQIICV 241
           A++ +TG +I V
Sbjct: 427 ASNAVTGNVIRV 438

>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 107/252 (42%), Gaps = 16/252 (6%)
Query: 3   ALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELD-ARLHEWKNKGFKVTGSVCDLSS 60
           A+VTG T GIG      LA  GA IV     +  E++  R       G KV     DLS 
Sbjct: 7   AVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSK 66
Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
            E    L++       G+++IL+NNA I       D   E    + + N  +VFH +  A
Sbjct: 67  GEAVRGLVDNAVRQM-GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAA 125
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
            P  K  G G I+ I+S  G+    + S Y A K  +   TK  A E A   I  N + P
Sbjct: 126 LPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICP 185
Query: 181 WVIKTSMIKP----------FEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPA 230
             +++ +++            ++     E L   + + P  +   P+++     FL   A
Sbjct: 186 GWVRSPLVEKQISALAEKNGVDQETAARELL---SEKQPSLQFVTPEQLGGTAVFLASDA 242
Query: 231 ASYITGQIICVD 242
           A+ ITG  + VD
Sbjct: 243 AAQITGTTVSVD 254

>pdb|2FWM|X Chain X, Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodihydroxy Benzoate Dehydrogenase Length = 250

Iteration: 1
 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 108/247 (43%), Gaps = 24/247 (9%)
Query: 5   VTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQR 64
           VTG  +GIG+AT       GA V    +           +  + +     V D++   Q 
Sbjct: 12  VTGAGKGIGYATALAFVEAGAKVTGFDQ----------AFTQEQYPFATEVMDVADAAQV 61
Query: 65  EKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLF 124
            ++ + + +  + +L+ L+N A I  +  T  ++ ED     + N    F+L Q     F
Sbjct: 62  AQVCQRLLAETE-RLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQF 120
Query: 125 KASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIK 184
           +    G+IV ++S         +S YGA K A+  L  ++  E A   +R N V+P    
Sbjct: 121 RRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTD 180
Query: 185 TSMIKPF---EEGPE------GSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT 235
           T M +     ++  E      G +F  GI    P+G+   P E+++ + FL    AS+IT
Sbjct: 181 TDMQRTLWVSDDAEEQRIRGFGEQFKLGI----PLGKIARPQEIANTILFLASDLASHIT 236
Query: 236 GQIICVD 242
            Q I VD
Sbjct: 237 LQDIVVD 243

>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260

Iteration: 1
 Score = 74.3 bits (181), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 106/252 (42%), Gaps = 16/252 (6%)
Query: 3   ALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELD-ARLHEWKNKGFKVTGSVCDLSS 60
           A+VTG T GIG      LA  GA IV     +  E++  R       G KV     DLS 
Sbjct: 7   AVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSK 66
Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
            E    L++       G+++IL+NNA I       D   E    + + N  +VFH +  A
Sbjct: 67  GEAVRGLVDNAVRQM-GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAA 125
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
            P  K  G G I+ I+S  G+    + S Y A K  +   TK  A E A   I  N + P
Sbjct: 126 LPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICP 185
Query: 181 WVIKTSMIKP----------FEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPA 230
             ++  +++            ++     E L   + + P  +   P+++     FL   A
Sbjct: 186 GWVRAPLVEKQISALAEKNGVDQETAARELL---SEKQPSLQFVTPEQLGGTAVFLASDA 242
Query: 231 ASYITGQIICVD 242
           A+ ITG  + VD
Sbjct: 243 AAQITGTTVSVD 254

>pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8 Length = 245

Iteration: 1
 Score = 74.3 bits (181), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 106/239 (44%), Gaps = 12/239 (5%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQ 63
           L+TG   GIG AT+E  A+ GA +  C   +  L  R          V   V D +S E+
Sbjct: 9   LITGAAHGIGRATLELFAKEGARLVACDIEEGPL--REAAEAVGAHPVVXDVADPASVER 66
Query: 64  REKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPL 123
                E +  +  G+L+ +++ A I           ED   V   N    F +++ A   
Sbjct: 67  --GFAEALAHL--GRLDGVVHYAGITRDNFHWKXPLEDWELVLRVNLTGSFLVAKAASEA 122
Query: 124 FKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVI 183
            +    GSIV  +S   +  +   + Y A    +  LT+ LA E  +  IR NT+AP  I
Sbjct: 123 XREKNPGSIVLTASRVYLGNLGQAN-YAASXAGVVGLTRTLALELGRWGIRVNTLAPGFI 181
Query: 184 KTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 242
           +T       E     +  +     TP+GRAG+P EV+    FL    +S+ITGQ++ VD
Sbjct: 182 ETRXTAKVPE-----KVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFITGQVLFVD 235

>pdb|3IMF|A Chain A, 1.99 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' Length = 257

Iteration: 1
 Score = 74.3 bits (181), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 104/229 (45%), Gaps = 13/229 (5%)
Query: 20  LARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79
            A+ GA V    R + +L+    E +    ++     D+ + +  +K IE +   F G++
Sbjct: 26  FAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQXDVRNTDDIQKXIEQIDEKF-GRI 84
Query: 80  NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSV 138
           +ILINNAA  F+ P  D++    ++V +      F+ SQ     +   G  G+I+   + 
Sbjct: 85  DILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINXVAT 144
Query: 139 GGVRGIPSVSLYGAYKGAMNQLTKNLACEWA-KDNIRTNTVAPWVIKTSMIKPFEEGPEG 197
                 P V    A K  +   TK LA EW  K  IR N +AP  I+ +       G + 
Sbjct: 145 YAWDAGPGVIHSAAAKAGVLAXTKTLAVEWGRKYGIRVNAIAPGPIERTG------GADK 198
Query: 198 SEFLDGIARQT----PIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 242
               +  A++T    P+GR G P+E++ L  +LC   A+YI G     D
Sbjct: 199 LWISEEXAKRTIQSVPLGRLGTPEEIAGLAYYLCSDEAAYINGTCXTXD 247

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score = 74.3 bits (181), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 87/184 (47%), Gaps = 3/184 (1%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQ 63
           L+TG + GIG     EL   GA +   +R Q  ++A   E ++ G      V D++ R  
Sbjct: 8   LITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHS 67
Query: 64  REKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPL 123
                +     + G++++L+NNA +  + P   +  ++   +   N + V        P+
Sbjct: 68  VAAFAQAAVDTW-GRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPI 126
Query: 124 FKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVI 183
            +A  +G I+ I S+G +  +P+ ++Y A K A+  ++  L  E    NIR   V P V+
Sbjct: 127 MEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQE--STNIRVTCVNPGVV 184
Query: 184 KTSM 187
           ++ +
Sbjct: 185 ESEL 188

>pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410 From Mycobacterium Paratuberculosis Bound To Nad Length = 277

Iteration: 1
 Score = 73.9 bits (180), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 112/267 (41%), Gaps = 36/267 (13%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIV---------------HTCSRNQIELDARLHEWKNK 47
           A +TG  RG G A    +A  GA +                  S + +    RL E  N+
Sbjct: 14  AFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANR 73
Query: 48  GFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSS 107
             ++  +V D    ++  K+++   +   G+L+I++ NA +A  +   DIT ED   V  
Sbjct: 74  --RIVAAVVDTRDFDRLRKVVDDGVAAL-GRLDIIVANAGVAAPQAWDDITPEDFRDVMD 130
Query: 108 TNFESVFHLSQLAHP-LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLAC 166
            N    ++      P + +    GSI+ ISS  G++  P +  Y A K A+  L +  A 
Sbjct: 131 INVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAVTGLARAFAA 190
Query: 167 EWAKDNIRTNTVAPWVIKTSM---------IKPFEEGPEGSEFLDGIARQTPI--GRAGE 215
           E  K +IR N+V P  + T M          +  E  P+ S  L      TP       E
Sbjct: 191 ELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVL------TPFLPDWVAE 244
Query: 216 PDEVSSLVAFLCLPAASYITGQIICVD 242
           P++++  V +L    +  +T   I VD
Sbjct: 245 PEDIADTVCWLASDESRKVTAAQIPVD 271

>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 73.9 bits (180), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 108/249 (43%), Gaps = 12/249 (4%)
Query: 3   ALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           ALVTG  RGIG A    L R GA +V   + +  + +  + E K  G        D+   
Sbjct: 21  ALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQV 80
Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
            +  KL +   + F G L+I ++N+ +       D+T E+   V S N    F +++ A+
Sbjct: 81  PEIVKLFDQAVAHF-GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAY 139
Query: 122 PLFKASGNGSIVFISS-VGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
                +  G IV  SS       +P  SL+   KGA++   +  + +     I  N VAP
Sbjct: 140 RHL--TEGGRIVLTSSNTSKDFSVPKHSLFSGSKGAVDSFVRIFSKDCGDKKITVNAVAP 197
Query: 181 WVIKTSMIKPFEEG--PEGSEFL-----DGIARQTPIGRAGEPDEVSSLVAFLCLPAASY 233
               T M         P G+ +         A  +P+ R G P +V+++V FL      +
Sbjct: 198 GGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVVGFLVSKEGEW 257
Query: 234 ITGQIICVD 242
           + G+++ +D
Sbjct: 258 VNGKVLTLD 266

>pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length = 301

Iteration: 1
 Score = 73.9 bits (180), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 6/193 (3%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           A+VTGG  GIG AT  E AR GA +     +Q  L+  ++  + +GF   G VCD+   +
Sbjct: 34  AVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLD 93
Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
           +  +L +    +  G ++++ +NA I    P   +  +D   V   +     H  +   P
Sbjct: 94  EMVRLADEAFRLL-GGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLP 152
Query: 123 -LFKASGNGSIVFISSVGGVRGIPSVSL--YGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
            L +    G I F +S  G+  +P+  L  YG  K  +  L + LA E   + I  + + 
Sbjct: 153 RLLEQGTGGHIAFTASFAGL--VPNAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLC 210
Query: 180 PWVIKTSMIKPFE 192
           P V++T ++   E
Sbjct: 211 PMVVETKLVSNSE 223

>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 102/241 (42%), Gaps = 14/241 (5%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK----GFKVTGSVCDL 58
           A+VTG +RGIG A    LA  G    T   N     A   E   K    G K   +  D+
Sbjct: 30  AIVTGASRGIGAAIAARLASDG---FTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADV 86
Query: 59  SSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQ 118
           S      +L  T    F G +++L+NNA I  +    +        V + N +  F+  +
Sbjct: 87  SDPAAVRRLFATAEEAF-GGVDVLVNNAGIXPLTTIAETGDAVFDRVIAVNLKGTFNTLR 145
Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
            A    +  G       S VG +   PS  +Y A K  +   T  L+ E    +I  N V
Sbjct: 146 EAAQRLRVGGRIINXSTSQVGLLH--PSYGIYAAAKAGVEAXTHVLSKELRGRDITVNAV 203
Query: 179 APWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI 238
           AP    T +   F EG +  E  D  A+  P+ R G P +++  VAFL  P  +++ GQ+
Sbjct: 204 APGPTATDL---FLEG-KSDEVRDRFAKLAPLERLGTPQDIAGAVAFLAGPDGAWVNGQV 259
Query: 239 I 239
           +
Sbjct: 260 L 260

>pdb|3GDF|A Chain A, Crystal Structure Of The Nadp-Dependent Mannitol Dehydrogenase From Cladosporium Herbarum. Length = 267

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 107/250 (42%), Gaps = 23/250 (9%)
Query: 4   LVTG--GTRGIGHATVEELARFGAIVHT--CSRNQIELDARLHEWKNKGFKVTGSVCDLS 59
           +VTG  G +G+G       A  GA V     SR Q   +      K  G K     C + 
Sbjct: 24  VVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVD 83
Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
           S E  EKL++ V + F G+++  I NA        +D + E  + V   +    FH ++ 
Sbjct: 84  SYESCEKLVKDVVADF-GQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKA 142
Query: 120 AHPLFKASGNGSIVFISSVGG-VRGIPS-VSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
               FK  G GS+V  +S+ G +   P   + Y   K     + ++LA EW +D  R N+
Sbjct: 143 VGHHFKERGTGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARSLANEW-RDFARVNS 201
Query: 178 VAPWVIKTSMIKPFEEGPEGSEFLDGIARQ-----TPIGRAGEPDEVSSLVAFLCLPAAS 232
           ++P  I T +          S+F+    +Q      P+GR G   E+     +    A++
Sbjct: 202 ISPGYIDTGL----------SDFVPKETQQLWHSMIPMGRDGLAKELKGAYVYFASDAST 251
Query: 233 YITGQIICVD 242
           Y TG  + +D
Sbjct: 252 YTTGADLLID 261

>pdb|1W73|A Chain A, Binary Structure Of Human Decr Solved By Semet Sad. Length = 302

Iteration: 1
 Score = 72.4 bits (176), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 91/197 (46%), Gaps = 6/197 (3%)
Query: 48  GFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSS 107
           G KV    CD+   +  +  +  +  +  G  NI+INNAA  F+ PT  ++     T++ 
Sbjct: 75  GNKVHAIQCDVRDPDXVQNTVSELIKV-AGHPNIVINNAAGNFISPTERLSPNAWKTITD 133
Query: 108 TNFE-SVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLAC 166
                + F   ++   L KA    + + I+++    G   V    + K  +   +K+LA 
Sbjct: 134 IVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAXSKSLAA 193
Query: 167 EWAKDNIRTNTVAPWVIKTSMIKPFEE-GPEGSEFLDGIARQTPIGRAGEPDEVSSLVAF 225
           EW K   R N + P  IKT     F    P G+   + I R  P GR G  +E+++L AF
Sbjct: 194 EWGKYGXRFNVIQPGPIKTK--GAFSRLDPTGTFEKEXIGR-IPCGRLGTVEELANLAAF 250
Query: 226 LCLPAASYITGQIICVD 242
           LC   AS+I G +I  D
Sbjct: 251 LCSDYASWINGAVIKFD 267

>pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid Dehydrogenase Type 4 In Complex With Nad Length = 327

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 101/233 (43%), Gaps = 28/233 (12%)
Query: 4   LVTGGTRGIGHATVEELARFGAIV---------HTCSRNQIELDARLHEWKNKGFKVTGS 54
           LVTG   G+G A     A  GA+V             +  +  D  + E + +G K   +
Sbjct: 34  LVTGAGAGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSLAADKVVEEIRRRGGK---A 90
Query: 55  VCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVF 114
           V +  S E+ EK+++T    F G++++++NNA I   +    I+ ED   +   +    F
Sbjct: 91  VANYDSVEEGEKVVKTALDAF-GRIDVVVNNAGILRDRSFARISDEDWDIIHRVHLRGSF 149
Query: 115 HLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIR 174
            +++ A    K    G I+  SS  G+ G    + Y A K  +  L  +LA E  K NI 
Sbjct: 150 QVTRAAWEHMKKQKYGRIIMTSSASGIYGNFGQANYSAAKLGLLGLANSLAIEGRKSNIH 209
Query: 175 TNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLC 227
            NT+AP                GS     +  +  +  A +P+ V+ LV +LC
Sbjct: 210 CNTIAP--------------NAGSRMTQTVMPEDLV-EALKPEYVAPLVLWLC 247

>pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With Nadp And Sepiapterin Length = 244

Iteration: 1
 Score = 71.6 bits (174), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 80/191 (41%), Gaps = 8/191 (4%)
Query: 4   LVTGGTRGIGHATVEELAR-------FGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVC 56
           L+TG  +GIG A   E AR       F  ++   SR   +L+    E + +G        
Sbjct: 6   LITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITA 65
Query: 57  DLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHL 116
           D+S      +L   +   + G ++ L+NNA +       D+T ED     +TN +  F L
Sbjct: 66  DISDMADVRRLTTHIVERY-GHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFL 124
Query: 117 SQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTN 176
           +Q    L +   +G I FI+SV   +     S+Y   K     L + +     K N+R  
Sbjct: 125 TQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNVRIT 184
Query: 177 TVAPWVIKTSM 187
            V P  + T M
Sbjct: 185 DVQPGAVYTPM 195

>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281

Iteration: 1
 Score = 71.2 bits (173), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 111/253 (43%), Gaps = 16/253 (6%)
Query: 2   TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKN-KGFKVTGSVCDLS 59
           TA++TG T GIG A    LA+ GA IV        E+     E        V     D +
Sbjct: 27  TAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADXT 86
Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
              +       V   F G  +IL+NNA + FV+   D   E    + + N  S FH  + 
Sbjct: 87  KPSEIADXXAXVADRFGGA-DILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRG 145
Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
           A P  K  G G I+ I+S  G+   P  S Y A K  +  LTK +A E A+  +  N++ 
Sbjct: 146 AIPPXKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIXGLTKTVALEVAESGVTVNSIC 205
Query: 180 PWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRA---GEP-------DEVSSLVAFLCLP 229
           P  + T +++  ++ P+ +    GI  +  I      G+P       ++V+SL  +L   
Sbjct: 206 PGYVLTPLVE--KQIPDQAR-TRGITEEQVINEVXLKGQPTKKFITVEQVASLALYLAGD 262
Query: 230 AASYITGQIICVD 242
            A+ ITG  +  D
Sbjct: 263 DAAQITGTHVSXD 275

>pdb|3SVT|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 281

Iteration: 1
 Score = 71.2 bits (173), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 92/187 (49%), Gaps = 5/187 (2%)
Query: 57  DLSSREQREKLIETVTSIFQGKLNILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFH 115
           D+++ ++  + ++ VT+ + G+L+ +++ A  +  + P   + +E        N     +
Sbjct: 71  DITNEDETARAVDAVTA-WHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMY 129
Query: 116 LSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
           + + A       G GS V ISS+           YG  K A++ L +  A E     +R 
Sbjct: 130 VLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADELGASWVRV 189
Query: 176 NTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT 235
           N++ P +I+T ++    E    +E     A  TP+ R GE ++V+++  FL   AAS++T
Sbjct: 190 NSIRPGLIRTDLVAAITES---AELSSDYAMCTPLPRQGEVEDVANMAMFLLSDAASFVT 246
Query: 236 GQIICVD 242
           GQ+I VD
Sbjct: 247 GQVINVD 253

>pdb|4EGF|A Chain A, Crystal Structure Of A L-Xylulose Reductase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 108/242 (44%), Gaps = 6/242 (2%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDA-RLHEWKNKGFKVTGSVCDLSSR 61
           AL+TG T+GIG       A  GA +    R+  ELDA R    +  G  V     DL+  
Sbjct: 23  ALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEP 82
Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHL-SQLA 120
           +   +L       F G L++L+NNA I+  +P VD   +      + N  +   L S + 
Sbjct: 83  DAPAELARRAAEAF-GGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVG 141
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
             +  A   G+I+ ++S   +  +P    Y   K  +   TK LA E     IR N+V P
Sbjct: 142 KAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCP 201
Query: 181 WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
            V+ T M +        S  +  IAR  P+GR   P EVS  V +L   AAS I G  I 
Sbjct: 202 TVVLTEMGQRVWGDEAKSAPM--IAR-IPLGRFAVPHEVSDAVVWLASDAASMINGVDIP 258
Query: 241 VD 242
           VD
Sbjct: 259 VD 260

>pdb|2QQ5|A Chain A, Crystal Structure Of Human Sdr Family Member 1 Length = 260

Iteration: 1
 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 8/193 (4%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQ 63
           +VTG +RGIG     +L + GA V+   R+   L     E ++ G +    VCD S   +
Sbjct: 9   VVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESE 68
Query: 64  REKLIETVTSIFQGKLNILINNAAIAFV-------KPTVDITAEDMSTVSSTNFESVFHL 116
              L E V    QG+L++L+NNA            K   +  A     +++      +  
Sbjct: 69  VRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFC 128
Query: 117 SQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTN 176
           S     L   +G G IV ISS G ++ + +V  YG  K A ++L  + A E  +  +   
Sbjct: 129 SVYGARLMVPAGQGLIVVISSPGSLQYMFNVP-YGVGKAACDKLAADCAHELRRHGVSCV 187
Query: 177 TVAPWVIKTSMIK 189
           ++ P +++T ++K
Sbjct: 188 SLWPGIVQTELLK 200

>pdb|2DKN|A Chain A, Crystal Structure Of The 3-alpha-hydroxysteroid Dehydrogenase From Pseudomonas Sp. B-0831 Complexed With Nadh Length = 255

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 106/267 (39%), Gaps = 58/267 (21%)
Query: 5   VTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQR 64
           +TG   GIG A  E LAR G  V    R Q +++A                 DLS+   R
Sbjct: 6   ITGSASGIGAALKELLARAGHTVIGIDRGQADIEA-----------------DLSTPGGR 48
Query: 65  EKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLF 124
           E  +  V     G L+ L+  A        V +TA +   V + N+   F +S L   L 
Sbjct: 49  ETAVAAVLDRCGGVLDGLVCCAG-------VGVTAANSGLVVAVNY---FGVSALLDGLA 98
Query: 125 KASGNG---SIVFISSVG----GVRGIPSVSL----------------------YGAYKG 155
           +A   G   + V + S+     G   +P V                        Y   K 
Sbjct: 99  EALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQTHLAYAGSKY 158
Query: 156 AMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGE 215
           A+  L +    +WA   +R N VAP  ++T +++  +  P   E         P+GR  E
Sbjct: 159 AVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYGESTRRFV--APLGRGSE 216
Query: 216 PDEVSSLVAFLCLPAASYITGQIICVD 242
           P EV+  +AFL  P AS+I G ++ VD
Sbjct: 217 PREVAEAIAFLLGPQASFIHGSVLFVD 243

>pdb|4GKB|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase Homolog (Target Efi- 505321) From Burkholderia Multivorans, Unliganded Structure Length = 258

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/187 (33%), Positives = 94/187 (50%), Gaps = 18/187 (9%)
Query: 64  REKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH-- 121
           R+ + +T+ +   G+L+ L+NNA    V   + + A   + V+S    ++ H   +AH  
Sbjct: 71  RDAVAQTIATF--GRLDGLVNNAG---VNDGIGLDAGRDAFVASLE-RNLIHYYAMAHYC 124
Query: 122 -PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
            P  KA+  G+IV ISS   V G  + S Y A KGA   LT+  A    +  +R N V P
Sbjct: 125 VPHLKAT-RGAIVNISSKTAVTGQGNTSGYCASKGAQLALTREWAVALREHGVRVNAVIP 183
Query: 181 WVIKTSM----IKPFEEGPEGSEFLDGIARQTPIGRA-GEPDEVSSLVAFLCLPAASYIT 235
             + T +    I  FE+ PE    L  IA + P+GR    PDE++    FL  P AS+ T
Sbjct: 184 AEVMTPLYRNWIATFED-PEAK--LAEIAAKVPLGRRFTTPDEIADTAVFLLSPRASHTT 240
Query: 236 GQIICVD 242
           G+ + VD
Sbjct: 241 GEWLFVD 247

>pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID Dehydrogenase Length = 253

Iteration: 1
 Score = 68.6 bits (166), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 102/242 (42%), Gaps = 7/242 (2%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           ALVTGG  G+G   V+ L   GA V     N+        E   +   V   V    S E
Sbjct: 9   ALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDV----SSE 64
Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
               L+        G LN+L+NNA I           ED S +   N ESVF   Q    
Sbjct: 65  ADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIA 124
Query: 123 LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTK--NLACEWAKDNIRTNTVAP 180
             K +G GSI+ ++SV     I   + Y A K A++ LT+   L+C      IR N++ P
Sbjct: 125 AMKETG-GSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHP 183
Query: 181 WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
             I T M++         E +    +    GRA  P+ ++ LV FL    +S ++G  + 
Sbjct: 184 DGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVMSGSELH 243
Query: 241 VD 242
            D
Sbjct: 244 AD 245

>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604

Iteration: 1
 Score = 68.6 bits (166), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 88/177 (49%), Gaps = 5/177 (2%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQ 63
           L+TG   G+G    +  A++GA V     +  +    + E K  G +      D++  + 
Sbjct: 326 LITGAGAGLGKEYAKWFAKYGAKV--VVNDFKDATKTVDEIKAAGGEAWPDQHDVA--KD 381
Query: 64  REKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPL 123
            E +I+ V   + G ++IL+NNA I   +    ++ ++  +V   +    F+LS+LA P 
Sbjct: 382 SEAIIKNVIDKY-GTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPY 440
Query: 124 FKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
           F     G I+ I+S  G+ G    + Y + K  +  L+K +A E AK+NI+ N VAP
Sbjct: 441 FVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAP 497

>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 109/248 (43%), Gaps = 31/248 (12%)
Query: 4   LVTGGTRGIGHATVEELARFGAIV---------HTCSRNQIELDARLHEW-KNKGFKVTG 53
           ++TG   G+G     E A+ GA V         +    N    D  + E  KN G     
Sbjct: 12  IITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGV---- 67
Query: 54  SVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESV 113
           +V D ++    +K++ET    F G ++++INNA I        +T +D   V   +    
Sbjct: 68  AVADYNNVLDGDKIVETAVKNF-GTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGA 126
Query: 114 FHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNI 173
           F +++ A P F+    G IV  SS  G+ G    + Y + K A+    + LA E AK NI
Sbjct: 127 FAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYASAKSALLGFAETLAKEGAKYNI 186
Query: 174 RTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASY 233
           + N +AP + ++ M +     P     L+ +           P++V+ LV +L   A + 
Sbjct: 187 KANAIAP-LARSRMTESIMPPP----MLEKLG----------PEKVAPLVLYLS-SAENE 230
Query: 234 ITGQIICV 241
           +TGQ   V
Sbjct: 231 LTGQFFEV 238

>pdb|1JA9|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Reductase In Complex With Nadph And Pyroquilon Length = 274

Iteration: 1
 Score = 68.2 bits (165), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 103/234 (44%), Gaps = 19/234 (8%)
Query: 19  ELARFGAIV----HTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSI 74
           EL R GA V     + S+   E+ A L +   +G  +     D+S   +   L +   S 
Sbjct: 40  ELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQ---ADISKPSEVVALFDKAVSH 96
Query: 75  FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVF 134
           F G L+ +++N+ +      +++T E    V + N    F ++Q    L      G I+ 
Sbjct: 97  F-GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQ--QGLKHCRRGGRIIL 153
Query: 135 ISSVGGVR-GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI--KPF 191
            SS+  V  GIP+ +LY   K A+    +  A +     +  N +AP  +KT M     +
Sbjct: 154 TSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSW 213
Query: 192 EEGPEGSEFL------DGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
              P G + +      +G+A   P+ R G P ++   V+ LC   + +I GQ+I
Sbjct: 214 HYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSALCQEESEWINGQVI 267

>pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase ((+)-Trans-Carveol Dehydrogenase) From Mycobacterium Avium Length = 286

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 83/179 (46%), Gaps = 14/179 (7%)
Query: 77  GKLNILINNAAIAFVKPTVDITAE-DMSTVSSTNFESVFHLSQLAHPLFKASGNG-SIVF 134
           G+L+I++ NA I     T+D T+E D + +   N   V+   +   P   A G G SI+ 
Sbjct: 103 GRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIIL 162
Query: 135 ISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI------ 188
            SSVGG++  P    Y A K  +  L +    E  +  IR N+V P  +KT M+      
Sbjct: 163 TSSVGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTF 222
Query: 189 ---KPFEE--GPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 242
              +P  E  GP+    +  +    PI    EP ++S+ V F     A YITG  + +D
Sbjct: 223 KMFRPDLENPGPDDMAPICQMFHTLPIPWV-EPIDISNAVLFFASDEARYITGVTLPID 280

>pdb|1GZ6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat Peroxisomal Multifunctional Enzyme Type 2 Length = 319

Iteration: 1
 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 99/233 (42%), Gaps = 28/233 (12%)
Query: 4   LVTGGTRGIGHATVEELARFGAIV---------HTCSRNQIELDARLHEWKNKGFKVTGS 54
           LVTG   G+G A     A  GA+V             +     D  + E + +G K   +
Sbjct: 13  LVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGK---A 69
Query: 55  VCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVF 114
           V +  S E  EKL++T    F G++++++NNA I   +    I+ ED   +   +    F
Sbjct: 70  VANYDSVEAGEKLVKTALDTF-GRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSF 128
Query: 115 HLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIR 174
            +++ A    K    G I+  +S  G+ G    + Y A K  +  L   L  E  K+NI 
Sbjct: 129 QVTRAAWDHXKKQNYGRIIXTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGRKNNIH 188
Query: 175 TNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLC 227
            NT+AP                GS   + +  +  +  A +P+ V+ LV +LC
Sbjct: 189 CNTIAP--------------NAGSRXTETVXPEDLV-EALKPEYVAPLVLWLC 226

>pdb|3BMC|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 115/264 (43%), Gaps = 33/264 (12%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVC--DLS- 59
           A+VTG  + IG A   +L + G  V     N  E    L +  NK    T  VC  DL+ 
Sbjct: 26  AVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTN 85
Query: 60  SREQREKLIETVTSIFQ--GKLNILINNAAIAFVKPTVDITAEDMS---TVSS------- 107
           S        E + S F+  G+ ++L+NNA+  +  P V    ED S   TV +       
Sbjct: 86  SNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIG 145
Query: 108 TNFESVFHLSQLAHPLFKA------SGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLT 161
           TN  + F L+       K       S N SIV +      +   + SLY   K A+  LT
Sbjct: 146 TNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLT 205
Query: 162 KNLACEWAKDNIRTNTVAPWV--IKTSMIKPFEEGPEGSEFLDGIARQTPIG-RAGEPDE 218
           ++ A E A   IR N VAP V  +  +M         G E  D   R+ P+G R    ++
Sbjct: 206 QSAALELAPYGIRVNGVAPGVSLLPVAM---------GEEEKDKWRRKVPLGRREASAEQ 256
Query: 219 VSSLVAFLCLPAASYITGQIICVD 242
           ++  V FL   +A YITG II VD
Sbjct: 257 IADAVIFLVSGSAQYITGSIIKVD 280

>pdb|3BMC|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 115/264 (43%), Gaps = 33/264 (12%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVC--DLS- 59
           A+VTG  + IG A   +L + G  V     N  E    L +  NK    T  VC  DL+ 
Sbjct: 26  AVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTN 85
Query: 60  SREQREKLIETVTSIFQ--GKLNILINNAAIAFVKPTVDITAEDMS---TVSS------- 107
           S        E + S F+  G+ ++L+NNA+  +  P V    ED S   TV +       
Sbjct: 86  SNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIG 145
Query: 108 TNFESVFHLSQLAHPLFKA------SGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLT 161
           TN  + F L+       K       S N SIV +      +   + SLY   K A+  LT
Sbjct: 146 TNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYNMGKHALVGLT 205
Query: 162 KNLACEWAKDNIRTNTVAPWV--IKTSMIKPFEEGPEGSEFLDGIARQTPIG-RAGEPDE 218
           ++ A E A   IR N VAP V  +  +M         G E  D   R+ P+G R    ++
Sbjct: 206 QSAALELAPYGIRVNGVAPGVSLLPVAM---------GEEEKDKWRRKVPLGRREASAEQ 256
Query: 219 VSSLVAFLCLPAASYITGQIICVD 242
           ++  V FL   +A YITG II VD
Sbjct: 257 IADAVIFLVSGSAQYITGSIIKVD 280

>pdb|3AFM|A Chain A, Crystal Structure Of Aldose Reductase A1-R Responsible For Alginate Metabolism Length = 258

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 108/250 (43%), Gaps = 19/250 (7%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQ-IELDARLHEWKNKGFKVTGSVCDLSSRE 62
           L+TG ++GIG AT    AR GA V    R     +D  +   +  G        DL++ E
Sbjct: 11  LITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSE 70
Query: 63  QREKLIETVTSIFQGKLNILINNAA-IAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
             ++L++   + F G +++LINNA  +   KP  +I       V   N  SV   ++ A 
Sbjct: 71  ACQQLVDEFVAKF-GGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFAL 129
Query: 122 PLF----KASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA----KDNI 173
           P      KASG  S V   S G + G           GA      N+   W     KD +
Sbjct: 130 PHLAAAAKASGQTSAVI--STGSIAGHTGGGPGAGLYGAAKAFLHNVHKNWVDFHTKDGV 187
Query: 174 RTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAAS- 232
           R N V+P  + T+         +  +  D I+   P+GR G  +E++    F     AS 
Sbjct: 188 RFNIVSPGTVDTAF-----HADKTQDVRDRISNGIPMGRFGTAEEMAPAFLFFASHLASG 242
Query: 233 YITGQIICVD 242
           YITGQ++ ++
Sbjct: 243 YITGQVLDIN 252

>pdb|2WD7|A Chain A, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 115/264 (43%), Gaps = 33/264 (12%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVC--DLS- 59
           A+VTG  + IG A   +L + G  V     N  E    L +  NK    T  VC  DL+ 
Sbjct: 6   AVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTN 65
Query: 60  SREQREKLIETVTSIFQ--GKLNILINNAAIAFVKPTVDITAEDMS---TVSS------- 107
           S        E + S F+  G+ ++L+NNA+  +  P V    ED S   TV +       
Sbjct: 66  SNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIG 125
Query: 108 TNFESVFHLSQLAHPLFKA------SGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLT 161
           TN  + F L+       K       S N SIV +      +   + SLY   K A+  LT
Sbjct: 126 TNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLT 185
Query: 162 KNLACEWAKDNIRTNTVAPWV--IKTSMIKPFEEGPEGSEFLDGIARQTPIG-RAGEPDE 218
           ++ A E A   IR N VAP V  +  +M         G E  D   R+ P+G R    ++
Sbjct: 186 QSAALELAPYGIRVNGVAPGVSLLPVAM---------GEEEKDKWRRKVPLGRREASAEQ 236
Query: 219 VSSLVAFLCLPAASYITGQIICVD 242
           ++  V FL   +A YITG II VD
Sbjct: 237 IADAVIFLVSGSAQYITGSIIKVD 260

>pdb|3EDM|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Agrobacterium Tumefaciens Length = 259

Iteration: 1
 Score = 64.7 bits (156), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 104/243 (42%), Gaps = 11/243 (4%)
Query: 2   TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
           T +V G  R IG A     A+ GA +V T +         + E +  G        DL++
Sbjct: 10  TIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTN 69
Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDM-STVSSTNFESVFHLSQL 119
             + E  I      F G+++ L++ A     + T+    E     V   N  S+F  ++ 
Sbjct: 70  AAEVEAAISAAADKF-GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKT 128
Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
           A P   A G   + F S  G   G P    Y   KGA+   T+ LA E     IR N V 
Sbjct: 129 ALPKM-AKGGAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEVGP-KIRVNAVC 186
Query: 180 PWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
           P +I T+    F + PE  E + G    T + R G  ++V+ LVAFL    A+Y+TG   
Sbjct: 187 PGMISTTFHDTFTK-PEVRERVAG---ATSLKREGSSEDVAGLVAFLASDDAAYVTGA-- 240
Query: 240 CVD 242
           C D
Sbjct: 241 CYD 243

>pdb|1FJH|A Chain A, The Crystal Structure Of 3-Alpha-Hydroxysteroid Dehydrogenase From Comamonas Testosteroni, A Member Of The Short Chain DehydrogenaseREDUCTASE FAMILY Length = 257

Iteration: 1
 Score = 64.3 bits (155), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 7/95 (7%)
Query: 152 AYKGAMNQLT---KNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIAR-Q 207
           AY G+ N LT   +  A  W +  +R NT+AP   +T +++   + P    + + IA+  
Sbjct: 154 AYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPR---YGESIAKFV 210
Query: 208 TPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 242
            P+GR  EP E++S++AFL  PAASY+ G  I +D
Sbjct: 211 PPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVID 245

>pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain DehydrogenaseREDUCTASE 3 Length = 270

Iteration: 1
 Score = 63.9 bits (154), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 15/218 (6%)
Query: 24  GAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILI 83
           GA V  C +++    A   E     F     +CD++  +  + L+      F G+L+ ++
Sbjct: 33  GARVVICDKDESGGRALEQELPGAVF----ILCDVTQEDDVKTLVSETIRRF-GRLDCVV 87
Query: 84  NNAA--IAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV 141
           NNA       +P  + +A+    +   N    + L++LA P  + S  G+++ ISS+ G 
Sbjct: 88  NNAGHHPPPQRPE-ETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGA 145
Query: 142 RGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM---IKPFEEGPEGS 198
            G      Y A KGA+  +TK LA + +   +R N ++P  I T +   +      P  S
Sbjct: 146 IGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRAS 205
Query: 199 EFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG 236
              +G+  Q P+GR G+P EV +   FL    A++ TG
Sbjct: 206 -IREGMLAQ-PLGRMGQPAEVGAAAVFLA-SEANFCTG 240

>pdb|3SX2|A Chain A, Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Paratuberculosis In Complex With Nad Length = 278

Iteration: 1
 Score = 63.9 bits (154), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 79/267 (29%), Positives = 114/267 (42%), Gaps = 37/267 (13%)
Query: 3   ALVTGGTRGIGHATVEELARFGA-IVHTCSRNQI-----------ELDARLHEWKNKGFK 50
           A +TG  RG G A    LA  GA I+     +QI           EL A +   ++ G +
Sbjct: 16  AFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSR 75
Query: 51  VTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNF 110
           +     D+  RE     ++       G+L+I++ NA IA +    D        V   N 
Sbjct: 76  IVARQADVRDRESLSAALQAGLDEL-GRLDIVVANAGIAPMSAGDD----GWHDVIDVNL 130
Query: 111 ESVFHLSQLAHP-LFKASGNGSIVFISSVGGVRGI----PSVSLYGAYKGAMNQLTKNLA 165
             V+H  ++A P L K    GSIV ISS  G+ G+    P    Y A K  +  L +  A
Sbjct: 131 TGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGVVGLMRVYA 190
Query: 166 CEWAKDNIRTNTVAPWVIKTSMIK-PFEEGPEGSEFLDGIARQTPI-GRAGE-------- 215
              A   IR N++ P  ++T MI   F       E+L  +A  T   G  G         
Sbjct: 191 NLLAGQMIRVNSIHPSGVETPMINNEFTR-----EWLAKMAAATDTPGAMGNAMPVEVLA 245
Query: 216 PDEVSSLVAFLCLPAASYITGQIICVD 242
           P++V++ VA+L    A YITG  + VD
Sbjct: 246 PEDVANAVAWLVSDQARYITGVTLPVD 272

>pdb|3GED|A Chain A, Fingerprint And Structural Analysis Of A Apo Scor Enzyme From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 99/240 (41%), Gaps = 20/240 (8%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQ 63
           +VTGG  GIG     +    G  V     ++ +  A   + +   F   G V D  + + 
Sbjct: 6   IVTGGGHGIGKQICLDFLEAGDKVCFIDIDE-KRSADFAKERPNLFYFHGDVADPLTLK- 63
Query: 64  REKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPL 123
             K +E      Q ++++L+NNA          +  E+   + S   ++ + LS+L    
Sbjct: 64  --KFVEYAMEKLQ-RIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDE 120
Query: 124 FKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP-WV 182
                 G I+ I+S    +  P    Y + KG +  LT  LA     D +  N +AP W+
Sbjct: 121 L-IKNKGRIINIASTRAFQSEPDSEAYASAKGGIVALTHALAMSLGPD-VLVNCIAPGWI 178
Query: 183 IKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 242
             T          E  EF        P G+ G P ++S++V FLC     +ITG+ I VD
Sbjct: 179 NVT----------EQQEFTQEDCAAIPAGKVGTPKDISNMVLFLC--QQDFITGETIIVD 226

>pdb|2AG5|A Chain A, Crystal Structure Of Human Dhrs6 Length = 246

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 105/225 (46%), Gaps = 12/225 (5%)
Query: 20  LARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79
            AR GA V     N+    ++L E + K   +   V D++ ++Q ++    V      +L
Sbjct: 26  FAREGAKVIATDINE----SKLQELE-KYPGIQTRVLDVTKKKQIDQFANEVE-----RL 75
Query: 80  NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVG 139
           ++L N A        +D   +D     + N  S++ + +   P   A  +G+I+ +SSV 
Sbjct: 76  DVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVA 135
Query: 140 G-VRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKT-SMIKPFEEGPEG 197
             V+G+ +  +Y   K A+  LTK++A ++ +  IR N V P  + T S+ +  +     
Sbjct: 136 SSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNP 195
Query: 198 SEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 242
            E  +   ++   GR    +E++ L  +L    ++Y+TG  + +D
Sbjct: 196 EEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVTGNPVIID 240

>pdb|2NWQ|A Chain A, Short Chain Dehydrogenase From Pseudomonas Aeruginosa Length = 272

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 73/181 (40%), Gaps = 4/181 (2%)
Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           T  +TG T G G A     A  G  +    R +  L A   E   K  +V     D+  R
Sbjct: 23  TLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK-TRVLPLTLDVRDR 81
Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
                 ++ +   F   L  LINNA +A    P      +D  T   TN + + + ++L 
Sbjct: 82  AAXSAAVDNLPEEF-ATLRGLINNAGLALGTDPAQSCDLDDWDTXVDTNIKGLLYSTRLL 140
Query: 121 HPLFKASGNG-SIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
            P   A G G SIV + SV G    P   +YG  K  + Q + NL C+     +R   + 
Sbjct: 141 LPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLE 200
Query: 180 P 180
           P
Sbjct: 201 P 201

>pdb|3KZV|A Chain A, The Crystal Structure Of A Cytoplasmic Protein With Unknown Function From Saccharomyces Cerevisiae Length = 254

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 112/249 (44%), Gaps = 23/249 (9%)
Query: 4   LVTGGTRGIGHATVEELARFG--AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           LVTG +RGIG + V+ L       +V+  +R++  L     ++ ++ F V G + + S  
Sbjct: 6   LVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVL 65
Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMST---VSSTNFESVFHLSQ 118
           +Q   L+        GK++ L+ NA +  ++P  ++   D++    +   NF S+  L  
Sbjct: 66  KQ---LVNAAVK-GHGKIDSLVANAGV--LEPVQNVNEIDVNAWKKLYDINFFSIVSLVG 119
Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
           +A P  K + NG++VF+SS        S   YG+ K A+N     LA E  +  ++   V
Sbjct: 120 IALPELKKT-NGNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANE--ERQVKAIAV 176
Query: 179 APWVIKTSM-------IKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAA 231
           AP ++ T M       + P     E  +   G+     +  +  P  V + +A   +P  
Sbjct: 177 APGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYAKLALHGIPDG 236
Query: 232 SYITGQIIC 240
             + GQ + 
Sbjct: 237 --VNGQYLS 243

>pdb|3OML|A Chain A, Structure Of Full-Length Peroxisomal Multifunctional Enzyme Type 2 From Drosophila Melanogaster Length = 613

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 84/187 (44%), Gaps = 13/187 (6%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIV--------HTCS-RNQIELDARLHEWKNKGFKVTG 53
           A+VTG   G+G       A  GA V        H+    +Q   D  + E +  G +   
Sbjct: 22  AVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGE--- 78
Query: 54  SVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESV 113
           +V D +S     K+IET    F G+++IL+NNA I   +  V  + +D + V+  + +  
Sbjct: 79  AVADYNSVIDGAKVIETAIKAF-GRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGS 137
Query: 114 FHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNI 173
           F  +Q A P  K    G I+  SS  G+ G      Y A K  +  L   +A E A++N+
Sbjct: 138 FKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLANTVAIEGARNNV 197
Query: 174 RTNTVAP 180
             N + P
Sbjct: 198 LCNVIVP 204

>pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 82/184 (44%), Gaps = 9/184 (4%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQ 63
           L+TG +RGIG AT   L   G  V   +R++  L A   E +     + G V     RE+
Sbjct: 9   LITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGA-LPLPGDV-----REE 62
Query: 64  RE--KLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
            +  + +  +   F G+L+ L+NNA +  +KP  ++T E+   V  TN    F   + A 
Sbjct: 63  GDWARAVAAMEEAF-GELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAV 121
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P     G G+IV + S+ G       + Y A K  +  L      +  + N+R   V P 
Sbjct: 122 PALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPG 181
Query: 182 VIKT 185
            + T
Sbjct: 182 SVDT 185

>pdb|3JQ7|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 82/264 (31%), Positives = 114/264 (43%), Gaps = 33/264 (12%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSV--CDLS- 59
           A+VTG  + IG A   +L + G  V     N  E    L +  NK    T  V   DL+ 
Sbjct: 26  AVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVXQADLTN 85
Query: 60  SREQREKLIETVTSIFQ--GKLNILINNAAIAFVKPTVDITAEDMS---TVSS------- 107
           S        E + S F+  G+ ++L+NNA+  +  P V    ED S   TV +       
Sbjct: 86  SNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIG 145
Query: 108 TNFESVFHLSQLAHPLFKA------SGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLT 161
           TN  + F L+       K       S N SIV +      +   + SLY   K A+  LT
Sbjct: 146 TNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYNMGKHALVGLT 205
Query: 162 KNLACEWAKDNIRTNTVAPWV--IKTSMIKPFEEGPEGSEFLDGIARQTPIG-RAGEPDE 218
           ++ A E A   IR N VAP V  +  +M         G E  D   R+ P+G R    ++
Sbjct: 206 QSAALELAPYGIRVNGVAPGVSLLPVAM---------GEEEKDKWRRKVPLGRREASAEQ 256
Query: 219 VSSLVAFLCLPAASYITGQIICVD 242
           ++  V FL   +A YITG II VD
Sbjct: 257 IADAVIFLVSGSAQYITGSIIKVD 280

>pdb|2WD7|B Chain B, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 82/264 (31%), Positives = 114/264 (43%), Gaps = 33/264 (12%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSV--CDLS- 59
           A+VTG  + IG A   +L + G  V     N  E    L +  NK    T  V   DL+ 
Sbjct: 6   AVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVXQADLTN 65
Query: 60  SREQREKLIETVTSIFQ--GKLNILINNAAIAFVKPTVDITAEDMS---TVSS------- 107
           S        E + S F+  G+ ++L+NNA+  +  P V    ED S   TV +       
Sbjct: 66  SNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIG 125
Query: 108 TNFESVFHLSQLAHPLFKA------SGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLT 161
           TN  + F L+       K       S N SIV +      +   + SLY   K A+  LT
Sbjct: 126 TNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLT 185
Query: 162 KNLACEWAKDNIRTNTVAPWV--IKTSMIKPFEEGPEGSEFLDGIARQTPIG-RAGEPDE 218
           ++ A E A   IR N VAP V  +  +M         G E  D   R+ P+G R    ++
Sbjct: 186 QSAALELAPYGIRVNGVAPGVSLLPVAM---------GEEEKDKWRRKVPLGRREASAEQ 236
Query: 219 VSSLVAFLCLPAASYITGQIICVD 242
           ++  V FL   +A YITG II VD
Sbjct: 237 IADAVIFLVSGSAQYITGSIIKVD 260

>pdb|3JQ7|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 82/264 (31%), Positives = 114/264 (43%), Gaps = 33/264 (12%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSV--CDLS- 59
           A+VTG  + IG A   +L + G  V     N  E    L +  NK    T  V   DL+ 
Sbjct: 26  AVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVXQADLTN 85
Query: 60  SREQREKLIETVTSIFQ--GKLNILINNAAIAFVKPTVDITAEDMS---TVSS------- 107
           S        E + S F+  G+ ++L+NNA+  +  P V    ED S   TV +       
Sbjct: 86  SNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIG 145
Query: 108 TNFESVFHLSQLAHPLFKA------SGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLT 161
           TN  + F L+       K       S N SIV +      +   + SLY   K A+  LT
Sbjct: 146 TNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLT 205
Query: 162 KNLACEWAKDNIRTNTVAPWV--IKTSMIKPFEEGPEGSEFLDGIARQTPIG-RAGEPDE 218
           ++ A E A   IR N VAP V  +  +M         G E  D   R+ P+G R    ++
Sbjct: 206 QSAALELAPYGIRVNGVAPGVSLLPVAM---------GEEEKDKWRRKVPLGRREASAEQ 256
Query: 219 VSSLVAFLCLPAASYITGQIICVD 242
           ++  V FL   +A YITG II VD
Sbjct: 257 IADAVIFLVSGSAQYITGSIIKVD 280

>pdb|2C7V|A Chain A, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1) In Ternary Complex With Cofactor And The Antifolate Methotrexate Length = 268

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 82/264 (31%), Positives = 114/264 (43%), Gaps = 33/264 (12%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSV--CDLS- 59
           A+VTG  + IG A   +L + G  V     N  E    L +  NK    T  V   DL+ 
Sbjct: 6   AVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVXQADLTN 65
Query: 60  SREQREKLIETVTSIFQ--GKLNILINNAAIAFVKPTVDITAEDMS---TVSS------- 107
           S        E + S F+  G+ ++L+NNA+  +  P V    ED S   TV +       
Sbjct: 66  SNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIG 125
Query: 108 TNFESVFHLSQLAHPLFKA------SGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLT 161
           TN  + F L+       K       S N SIV +      +   + SLY   K A+  LT
Sbjct: 126 TNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYNMGKHALVGLT 185
Query: 162 KNLACEWAKDNIRTNTVAPWV--IKTSMIKPFEEGPEGSEFLDGIARQTPIG-RAGEPDE 218
           ++ A E A   IR N VAP V  +  +M         G E  D   R+ P+G R    ++
Sbjct: 186 QSAALELAPYGIRVNGVAPGVSLLPVAM---------GEEEKDKWRRKVPLGRREASAEQ 236
Query: 219 VSSLVAFLCLPAASYITGQIICVD 242
           ++  V FL   +A YITG II VD
Sbjct: 237 IADAVIFLVSGSAQYITGSIIKVD 260

>pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE From Mycobacterium Abscessus Bound To Nad Length = 281

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/266 (25%), Positives = 108/266 (40%), Gaps = 29/266 (10%)
Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQ------------IELDARLHEWKNKGF 49
           TAL+TGG RG+G +    LA  GA +  C R +             +L   +   +  G 
Sbjct: 12  TALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGR 71
Query: 50  KVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTN 109
           +   +  D+  R   E  +        G ++I I NA I+ +    ++ +     V  TN
Sbjct: 72  RCISAKVDVKDRAALESFVAEAEDTL-GGIDIAITNAGISTIALLPEVESAQWDEVIGTN 130
Query: 110 FESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA 169
               F+      P       G IV +SS+ G     + + Y + K  +  LTK  A +  
Sbjct: 131 LTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSKWGVIGLTKCAAHDLV 190
Query: 170 KDNIRTNTVAPWVIKTSM---------IKPFEEGPE----GSEFLDGIARQTPIGRAGEP 216
              I  N VAP  I+T M         ++P  E P      S F     +  P  +   P
Sbjct: 191 GYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAPFLK---P 247
Query: 217 DEVSSLVAFLCLPAASYITGQIICVD 242
           +EV+  V FL   A+S+ITG ++ +D
Sbjct: 248 EEVTRAVLFLVDEASSHITGTVLPID 273

>pdb|1ZMO|A Chain A, Apo Structure Of Haloalcohol Dehalogenase Hhea Of Arthrobacter Sp. Ad2 Length = 244

Iteration: 1
 Score = 61.2 bits (147), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 101/245 (41%), Gaps = 18/245 (7%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIV--HTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
           ALVT      G A VE L + G  V  H  S        R  E +N G         ++ 
Sbjct: 4   ALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRF-ESENPG--------TIAL 54
Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVS-STNFE--SVFH-- 115
            EQ+ + +   T      ++ +++N  I   +P   +  E  S       FE  S+F   
Sbjct: 55  AEQKPERLVDATLQHGEAIDTIVSNDYIP--RPMNRLPLEGTSEADIRQMFEALSIFPIL 112
Query: 116 LSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
           L Q A    +A+G  S++FI+S  G + +    LYG  + A   L ++ A   ++D I  
Sbjct: 113 LLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARAATVALVESAAKTLSRDGILL 172
Query: 176 NTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT 235
             + P         P  +     E  + + R  P+GR G PDE+ +L+ FL    A+ I 
Sbjct: 173 YAIGPNFFNNPTYFPTSDWENNPELRERVDRDVPLGRLGRPDEMGALITFLASRRAAPIV 232
Query: 236 GQIIC 240
           GQ   
Sbjct: 233 GQFFA 237

>pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical Analysis Of The Final Step In The Biosynthesis Of The Beta- Lactamase Inhibitor Clavulanic Acid Length = 247

Iteration: 1
 Score = 60.8 bits (146), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 88/185 (47%), Gaps = 2/185 (1%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           AL+TG + GIG AT   LA  GA V   +R   +L A   E    G KV     D++ R+
Sbjct: 10  ALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQ 69
Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
             +  + +      G L+IL+NNA I  + P  D    D + +  TN   + ++++ A P
Sbjct: 70  GVDAAVASTVEAL-GGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALP 128
Query: 123 LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWV 182
               S  G++V +SS+ G   + + ++Y A K  +N  ++ L  E  +  +R   + P  
Sbjct: 129 HLLRS-KGTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGT 187
Query: 183 IKTSM 187
             T +
Sbjct: 188 TDTEL 192

>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281

Iteration: 1
 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 86/185 (46%), Gaps = 4/185 (2%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQ 63
           LVTG + G G A  E     G  V   +R    LD  +  + ++   ++    D++  E+
Sbjct: 9   LVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAIS---LDVTDGER 65
Query: 64  REKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPL 123
            + +   V + + G++++L+NNA    V    + T  ++  +   +      L++   P 
Sbjct: 66  IDVVAADVLARY-GRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQ 124
Query: 124 FKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVI 183
            +  G+GS+V ISS GG       S Y A K A+ QL++ LA E A   I+   V P   
Sbjct: 125 XRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAF 184
Query: 184 KTSMI 188
           +T++ 
Sbjct: 185 RTNLF 189

>pdb|2O23|A Chain A, The Structure Of Wild-Type Human Hadh2 (17beta-Hydroxysteroid Dehydrogenase Type 10) Bound To Nad+ At 1.2 A Length = 265

Iteration: 1
 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 114/264 (43%), Gaps = 42/264 (15%)
Query: 1   MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG----FKVTGSVC 56
           + A++TGG  G+G AT E L   GA             A L +  N G     K  G+ C
Sbjct: 13  LVAVITGGASGLGLATAERLVGQGA------------SAVLLDLPNSGGEAQAKKLGNNC 60
Query: 57  DLSSRE-QREKLIETVTSIFQGK---LNILINNAAIAFVKPTVDI------TAEDMSTVS 106
             +  +   EK ++T  ++ +GK   +++ +N A IA    T ++      T ED   V 
Sbjct: 61  VFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVL 120
Query: 107 STNFESVFHLSQLAHPLF------KASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160
             N    F++ +L           +    G I+  +SV    G    + Y A KG +  +
Sbjct: 121 DVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGM 180
Query: 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPI-GRAGEPDEV 219
           T  +A + A   IR  T+AP +  T ++    E     +  + +A Q P   R G+P E 
Sbjct: 181 TLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPE-----KVCNFLASQVPFPSRLGDPAEY 235
Query: 220 SSLV-AFLCLPAASYITGQIICVD 242
           + LV A +  P   ++ G++I +D
Sbjct: 236 AHLVQAIIENP---FLNGEVIRLD 256

>pdb|1SO8|A Chain A, Abeta-bound Human Abad Structure [also Known As 3-hydroxyacyl-coa Dehydrogenase Type Ii (type Ii Hadh), Endoplasmic Reticulum- Associated Amyloid Beta-peptide Binding Protein (erab)] Length = 261

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 114/264 (43%), Gaps = 42/264 (15%)
Query: 1   MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG----FKVTGSVC 56
           + A++TGG  G+G AT E L   GA             A L +  N G     K  G+ C
Sbjct: 11  LVAVITGGASGLGLATAERLVGQGA------------SAVLLDLPNSGGEAQAKKLGNNC 58
Query: 57  DLSSRE-QREKLIETVTSIFQGK---LNILINNAAIAFVKPTVDI------TAEDMSTVS 106
             +  +   EK ++T  ++ +GK   +++ +N A IA    T ++      T ED   V 
Sbjct: 59  VFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVL 118
Query: 107 STNFESVFHLSQLAHPLF------KASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160
             N    F++ +L           +    G I+  +SV    G    + Y A KG +  +
Sbjct: 119 DVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGM 178
Query: 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPI-GRAGEPDEV 219
           T  +A + A   IR  T+AP +  T ++    E     +  + +A Q P   R G+P E 
Sbjct: 179 TLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPE-----KVCNFLASQVPFPSRLGDPAEY 233
Query: 220 SSLV-AFLCLPAASYITGQIICVD 242
           + LV A +  P   ++ G++I +D
Sbjct: 234 AHLVQAIIENP---FLNGEVIRLD 254

>pdb|3UWR|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Strain 104 Length = 286

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/267 (27%), Positives = 108/267 (40%), Gaps = 31/267 (11%)
Query: 3   ALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           A ++G  RG G +    LA+ GA I+       IE  A  H       +    V DL  R
Sbjct: 18  AFISGAARGQGRSHAVRLAQEGADIIAIDICGPIENLAYPHSTPEDLAETADLVKDLDRR 77
Query: 62  --------EQREKLIETVTSIFQ--GKLNILINNAAIAF----VKPTVDITAEDMSTVSS 107
                      E L   V S  +  G+L+I++ NA +      +    D   +DM  +  
Sbjct: 78  IVTAQVDVRDFEALKSAVDSGVEQLGRLDIIVANAGVGTDGRKLHKIRDNVWQDMIDI-- 135
Query: 108 TNFESVFHLSQLAHPLFKASGNG-SIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLAC 166
            N   V+H  +   P   + G G SIV  SSVGG +  P+   Y A K  +  L +  A 
Sbjct: 136 -NLTGVWHTVKAGVPHVLSGGRGGSIVLTSSVGGRKAYPNTGHYIAAKHGVIGLMRAFAV 194
Query: 167 EWAKDNIRTNTVAPWVIKTSMI---------KPFEEGPEGSEF--LDGIARQTPIGRAGE 215
           E     IR N V P  + T+M+         +P  E P   +F  +  +    P+     
Sbjct: 195 ELGPHMIRVNAVLPTQVSTTMVMNDQTFRLFRPDLENPGPDDFAPISQMMHTLPVPWVDA 254
Query: 216 PDEVSSLVAFLCLPAASYITGQIICVD 242
            D +S+ V FL    + Y+TG  + VD
Sbjct: 255 SD-ISNAVLFLASDESRYVTGVSLPVD 280

>pdb|2Y93|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3- Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-356. Length = 281

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 104/256 (40%), Gaps = 27/256 (10%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK-NKGFKVTGSVCDLSSR 61
           AL+TGG  G+G A V+     GA V    ++      RL E +   G    G V D+ S 
Sbjct: 8   ALITGGASGLGRALVDRFVAEGARVAVLDKSA----ERLRELEVAHGGNAVGVVGDVRSL 63
Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAED-----MSTVSSTNFESVFHL 116
           + +++  E   + F GK++ LI NA I      +    ED        +   N +   H 
Sbjct: 64  QDQKRAAERCLAAF-GKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHA 122
Query: 117 SQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTN 176
            +   P   +S  GS+VF  S  G        LY A K A+  L + +A E A  ++R N
Sbjct: 123 VKACLPALVSS-RGSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELAP-HVRVN 180
Query: 177 TVAPWVIKTSMIKP-----FEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLC---- 227
            VAP  + T +  P      E+        D +    PIGR    +E +    F      
Sbjct: 181 GVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAYVFFATRGD 240
Query: 228 -LPAASYITGQIICVD 242
            LPA    TG ++  D
Sbjct: 241 SLPA----TGALLNYD 252

>pdb|3UCX|A Chain A, The Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 264

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 110/246 (44%), Gaps = 19/246 (7%)
Query: 11  GIGHATVEELARF----GAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREK 66
           G+G A    LAR     GA +   +R    L+    +  + G +      D++   Q   
Sbjct: 18  GVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAH 77
Query: 67  LIETVTSIFQGKLNILINNA-AIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFK 125
           L++     + G+++++INNA  +  +KP  + T E M             L Q   P  +
Sbjct: 78  LVDETMKAY-GRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALE 136
Query: 126 ASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL---TKNLACEWAKDNIRTNTVAPWV 182
            S  G++V ++S+  VR   S + YGAYK A + L   ++ LA E  +  IR N+V P  
Sbjct: 137 ES-KGAVVNVNSMV-VR--HSQAKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGY 192
Query: 183 IKTSMIKPFEEGPEGS------EFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG 236
           I    +K + E   G       +  +  A  + + R    DEV+S + F+    AS ITG
Sbjct: 193 IWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAILFMASDLASGITG 252
Query: 237 QIICVD 242
           Q + V+
Sbjct: 253 QALDVN 258

>pdb|2BGK|A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase Length = 278

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 91/192 (47%), Gaps = 8/192 (4%)
Query: 56  CDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITA--EDMSTVSSTNFESV 113
           CD++  E    L++T T    GKL+I+  N  +    P   + A  ED   V   N    
Sbjct: 71  CDVTKDEDVRNLVDT-TIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGA 129
Query: 114 FHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVS-LYGAYKGAMNQLTKNLACEWAKDN 172
           F +++ A  +   +  GSIVF +S+        VS +Y A K A+  LT +L  E  +  
Sbjct: 130 FLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYG 189
Query: 173 IRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTP--IGRAGEPDEVSSLVAFLCLPA 230
           IR N V+P+++ + ++     G + S  ++ +A Q     G     ++V+  VA+L    
Sbjct: 190 IRVNCVSPYIVASPLLTDV-FGVDSSR-VEELAHQAANLKGTLLRAEDVADAVAYLAGDE 247
Query: 231 ASYITGQIICVD 242
           + Y++G  + +D
Sbjct: 248 SKYVSGLNLVID 259

>pdb|1U7T|A Chain A, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR Length = 261

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 114/264 (43%), Gaps = 42/264 (15%)
Query: 1   MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG----FKVTGSVC 56
           + A++TGG  G+G AT E L   GA             A L +  N G     K  G+ C
Sbjct: 11  LVAVITGGASGLGLATAERLVGQGA------------SAVLLDLPNSGGEAQAKKLGNNC 58
Query: 57  DLSSRE-QREKLIETVTSIFQGK---LNILINNAAIAFVKPTVDI------TAEDMSTVS 106
             +  +   EK ++T  ++ +GK   +++ +N A IA    T ++      T ED   V 
Sbjct: 59  VFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVL 118
Query: 107 STNFESVFHLSQLAHPLF------KASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160
             N    F++ +L           +    G I+  +SV    G    + Y A KG +  +
Sbjct: 119 DVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGM 178
Query: 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPI-GRAGEPDEV 219
           T  +A + A   IR  T+AP +  T ++    E     +  + +A Q P   R G+P E 
Sbjct: 179 TLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPE-----KVRNFLASQVPFPSRLGDPAEY 233
Query: 220 SSLV-AFLCLPAASYITGQIICVD 242
           + LV A +  P   ++ G++I +D
Sbjct: 234 AHLVQAIIENP---FLNGEVIRLD 254

>pdb|2YW9|A Chain A, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8 Length = 261

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 108/252 (42%), Gaps = 25/252 (9%)
Query: 3   ALVTGGT--RGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSV----C 56
           ALV G T  R +G A   +L   GA V    + +     RL     K  +  G       
Sbjct: 11  ALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAE-----RLRPEAEKLAEALGGALLFRA 65
Query: 57  DLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPT------VDITAEDMSTVSSTNF 110
           D++  E+ + L   V   F G L+ L++  AIAF          +D   +D       + 
Sbjct: 66  DVTQDEELDALFAGVKEAF-GGLDYLVH--AIAFAPREAMEGRYIDTRRQDWLLALEVSA 122
Query: 111 ESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAK 170
            S+  +++ A PL +  G   IV ++     + +P  ++    K A+    + LA E   
Sbjct: 123 YSLVAVARRAEPLLREGGG--IVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYELGP 180
Query: 171 DNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPA 230
             +R N ++   ++T   +     P  ++  D +A+  P+ R    +EV +L  FL  P 
Sbjct: 181 KGVRVNAISAGPVRTVAARSI---PGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPL 237
Query: 231 ASYITGQIICVD 242
           AS ITG+++ VD
Sbjct: 238 ASGITGEVVYVD 249

>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp Length = 279

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 104/211 (49%), Gaps = 26/211 (12%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVT--GSVCDLSS 60
           ALVTG + GIG A    L + G  V  C+R    ++    E K+ G+  T     CDLS+
Sbjct: 35  ALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSN 94
Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
            E    +   + S   G ++I INNA +A  +P   ++       S++ ++ +F+++ LA
Sbjct: 95  EEDILSMFSAIRSQHSG-VDICINNAGLA--RPDTLLSG------STSGWKDMFNVNVLA 145
Query: 121 HPLF----------KASGNGSIVFISSVGGVRGIP-SVS-LYGAYKGAMNQLTKNLACEW 168
             +           +   +G I+ I+S+ G R +P SV+  Y A K A+  LT+ L  E 
Sbjct: 146 LSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQEL 205
Query: 169 --AKDNIRTNTVAPWVIKTSM-IKPFEEGPE 196
             A+ +IR   ++P V++T    K  ++ PE
Sbjct: 206 REAQTHIRATCISPGVVETQFAFKLHDKDPE 236

>pdb|1BDB|A Chain A, Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From Pseudomonas Sp. Lb400 Length = 277

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 110/256 (42%), Gaps = 29/256 (11%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK-NKGFKVTGSVCDLSSRE 62
           L+TGG  G+G A V+     GA V    ++      RL E + + G  V G V D+ S E
Sbjct: 9   LITGGASGLGRALVDRFVAEGAKVAVLDKSA----ERLAELETDHGDNVLGIVGDVRSLE 64
Query: 63  QREKLIETVTSIFQGKLNILINNAAI-AFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
            +++      + F GK++ LI NA I  +    VD+  E +       F+ VFH++   +
Sbjct: 65  DQKQAASRCVARF-GKIDTLIPNAGIWDYSTALVDLPEESLDAA----FDEVFHINVKGY 119
Query: 122 --------PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNI 173
                   P   AS  G+++F  S  G        LY A K A+  L + LA E A   +
Sbjct: 120 IHAVKACLPALVAS-RGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELAP-YV 177
Query: 174 RTNTVAPWVIKTSMIKPFEEGPEGSEFL------DGIARQTPIGRAGEPDEVSSLVAFLC 227
           R N V    I + +  P   G  GS+ +      D +    PIGR  E +E +    F  
Sbjct: 178 RVNGVGSGGINSDLRGPSSLG-MGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAYVFFA 236
Query: 228 LPA-ASYITGQIICVD 242
               A+  TG ++  D
Sbjct: 237 TRGDAAPATGALLNYD 252

>pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia Coli Length = 248

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 84/182 (46%), Gaps = 7/182 (3%)
Query: 1   MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLS 59
           M  LVTG T G G        + G  V    R Q     RL E K++ G  +  +  D+ 
Sbjct: 1   MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQ----ERLQELKDELGDNLYIAQLDVR 56
Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQ 118
           +R   E+++ ++ + +   ++IL+NNA +A  ++P    + ED  T+  TN + + ++++
Sbjct: 57  NRAAIEEMLASLPAEW-CNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTR 115
Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
              P      +G I+ I S  G       ++YGA K  + Q + NL  +     +R   +
Sbjct: 116 AVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDI 175
Query: 179 AP 180
            P
Sbjct: 176 EP 177

>pdb|1ULU|A Chain A, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8 Length = 261

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 108/252 (42%), Gaps = 25/252 (9%)
Query: 3   ALVTGGT--RGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSV----C 56
           ALV G T  R +G A   +L   GA V    + +     RL     K  +  G       
Sbjct: 11  ALVXGVTNQRSLGFAIAAKLKEAGAEVALSYQAE-----RLRPEAEKLAEALGGALLFRA 65
Query: 57  DLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPT------VDITAEDMSTVSSTNF 110
           D++  E+ + L   V   F G L+ L++  AIAF          +D   +D       + 
Sbjct: 66  DVTQDEELDALFAGVKEAF-GGLDYLVH--AIAFAPREAXEGRYIDTRRQDWLLALEVSA 122
Query: 111 ESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAK 170
            S+  +++ A PL +  G   IV ++     + +P  ++    K A+    + LA E   
Sbjct: 123 YSLVAVARRAEPLLREGGG--IVTLTYYASEKVVPKYNVXAIAKAALEASVRYLAYELGP 180
Query: 171 DNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPA 230
             +R N ++   ++T   +     P  ++  D +A+  P+ R    +EV +L  FL  P 
Sbjct: 181 KGVRVNAISAGPVRTVAARSI---PGFTKXYDRVAQTAPLRRNITQEEVGNLGLFLLSPL 237
Query: 231 ASYITGQIICVD 242
           AS ITG+++ VD
Sbjct: 238 ASGITGEVVYVD 249

>pdb|2P91|A Chain A, Crystal Structure Of Enoyl-[acyl-Carrier-Protein] Reductase (Nadh) From Aquifex Aeolicus Vf5 Length = 285

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 111/250 (44%), Gaps = 20/250 (8%)
Query: 3   ALVTG--GTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSV-CDLS 59
           AL+TG    R I +   +   R GA +   +    +L+ R+ E   KGF     V CD+S
Sbjct: 24  ALITGVANERSIAYGIAKSFHREGAQL-AFTYATPKLEKRVREIA-KGFGSDLVVKCDVS 81
Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIA----FVKPTVDITAEDMSTVSSTNFESVFH 115
             E  + L + +   + G L+I++++ A A    F    +D + E        +  S+  
Sbjct: 82  LDEDIKNLKKFLEENW-GSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIA 140
Query: 116 LSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
           L++   PL +   NG+IV +S  G  + +P  ++ G  K A+    + LA + AK   R 
Sbjct: 141 LTRELLPLMEGR-NGAIVTLSYYGAEKVVPHYNVMGIAKAALESTVRYLAYDIAKHGHRI 199
Query: 176 NTVAPWVIKT---SMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAAS 232
           N ++   +KT     I  F         ++   +  P G+    ++V     FLC   A 
Sbjct: 200 NAISAGPVKTLAAYSITGFHL------LMEHTTKVNPFGKPITIEDVGDTAVFLCSDWAR 253
Query: 233 YITGQIICVD 242
            ITG+++ VD
Sbjct: 254 AITGEVVHVD 263

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 96/207 (46%), Gaps = 14/207 (6%)
Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQ---IELDARLHEWKNKGFKVTGSVCDL 58
            ALVTG  +GIG A  E L   GA V     N    ++  A LHE + +  K     CD+
Sbjct: 9   VALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHE-QFEPQKTLFIQCDV 67
Query: 59  SSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQ 118
           + ++Q       V   F G+L+IL+NNA +   K        ++ +V S  +  + ++S+
Sbjct: 68  ADQQQLRDTFRKVVDHF-GRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSK 126
Query: 119 LAHPLFKASGNGSIVF-ISSVGGVRGIPSVSLYGAYKGAMNQLTKN--LACEWAKDNIRT 175
                 +  G G I+  +SS+ G+  +    +Y A K  +   T++  LA       +R 
Sbjct: 127 ------QNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRL 180
Query: 176 NTVAPWVIKTSMIKPFEEGPEGSEFLD 202
           N + P  + T++++  E+     ++++
Sbjct: 181 NAICPGFVNTAILESIEKEENMGQYIE 207

>pdb|2JAH|A Chain A, Biochemical And Structural Analysis Of The Clavulanic Acid Dehydeogenase (Cad) From Streptomyces Clavuligerus Length = 247

Iteration: 1
 Score = 57.4 bits (137), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 85/185 (45%), Gaps = 2/185 (1%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           AL+TG + GIG AT   LA  GA V   +R   +L A   E    G KV     D++ R+
Sbjct: 10  ALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQ 69
Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
             +  + +      G L+IL+NNA I  + P  D    D +    TN   + + ++ A P
Sbjct: 70  GVDAAVASTVEAL-GGLDILVNNAGIXLLGPVEDADTTDWTRXIDTNLLGLXYXTRAALP 128
Query: 123 LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWV 182
               S  G++V  SS+ G   + + ++Y A K  +N  ++ L  E  +  +R   + P  
Sbjct: 129 HLLRS-KGTVVQXSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGT 187
Query: 183 IKTSM 187
             T +
Sbjct: 188 TDTEL 192

>pdb|1MXF|A Chain A, Crystal Structure Of Inhibitor Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 114/266 (42%), Gaps = 35/266 (13%)
Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCD---- 57
            A++TGG R IGH+    L + G  V    R+      RL    N     +  +C     
Sbjct: 13  AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLS 72
Query: 58  --LSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTV--DIT--AEDMSTVSSTNFE 111
              S  +  E +I+     F G+ ++L+NNA+  +  P +  D T  A D   + +   E
Sbjct: 73  LSSSLLDCCEDIIDCSFRAF-GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAE 131
Query: 112 SVFHLSQLAHPLF------KASGNG--------SIVFISSVGGVRGIPSVSLYGAYKGAM 157
            +F  + +A PLF      +  G G        S+V +        +P   +Y   K A+
Sbjct: 132 -LFGSNAVA-PLFLIRAFARRQGEGGAWRSRNLSVVNLCDAXTDLPLPGFCVYTXAKHAL 189
Query: 158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRA-GEP 216
             LT+  A E A  +IR N VAP +   S++ P        E+     R+ P+G++    
Sbjct: 190 GGLTRAAALELAPRHIRVNAVAPGL---SLLPPAXPQETQEEYR----RKVPLGQSEASA 242
Query: 217 DEVSSLVAFLCLPAASYITGQIICVD 242
            +++  +AFL    A YITG  + VD
Sbjct: 243 AQIADAIAFLVSKDAGYITGTTLKVD 268

>pdb|3OIF|A Chain A, Crystal Structure Of Enoyl-Acp Reductases I (Fabi) From B. Subtilis (Complex With Nad And Tcl) Length = 266

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 3/113 (2%)
Query: 130 GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189
           GSIV ++ +GG   +P+ ++ G  K +++   K LA +  K+NIR N+++   I+T   K
Sbjct: 141 GSIVTLTYLGGELVMPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAK 200
Query: 190 PFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 242
                 + +  L  I  + P+ R   P+EV    AFL    +  ITG+ + VD
Sbjct: 201 GI---SDFNSILKDIEERAPLRRTTTPEEVGDTAAFLFSDMSRGITGENLHVD 250

>pdb|3NRC|A Chain A, Crystal Stucture Of The Francisella Tularensis Enoyl-Acyl Carrier Protein Reductase (Fabi) In Complex With Nad+ And Triclosan Length = 280

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 20/197 (10%)
Query: 56  CDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFH 115
           CD+ S ++ + L   +  ++ G L+ ++++ A A   P   +    +  V+   F     
Sbjct: 82  CDVISDQEIKDLFVELGKVWDG-LDAIVHSIAFA---PRDQLEGNFIDCVTREGFSIAHD 137
Query: 116 LSQLAHPLFKASG-------NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEW 168
           +S  +       G       N S+V ++ +G  + +PS +  G  K ++    +  A   
Sbjct: 138 ISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMPSYNTMGVAKASLEATVRYTALAL 197
Query: 169 AKDNIRTNTVAPWVIKT---SMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAF 225
            +D I+ N V+   IKT   S I  F+      + LD  A  +P+ +  +  EV + VAF
Sbjct: 198 GEDGIKVNAVSAGPIKTLAASGISNFK------KMLDYNAMVSPLKKNVDIMEVGNTVAF 251
Query: 226 LCLPAASYITGQIICVD 242
           LC   A+ ITG+++ VD
Sbjct: 252 LCSDMATGITGEVVHVD 268

>pdb|3F1L|A Chain A, The 0.95 A Structure Of An Oxidoreductase, Ycik From E.Coli Length = 252

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 83/187 (44%), Gaps = 4/187 (2%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIEL-DARLHEWKNKGFKVTGSVCDL--SS 60
           LVTG + GIG       AR+GA V    RN+ +L     H  +  G +    + DL   +
Sbjct: 16  LVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCT 75
Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
            E  ++L + +   +     +L N   +  V P  +   +    V   N  + F L+Q  
Sbjct: 76  SENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQAL 135
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
            PL   S  GS+VF SS  G +G  +   Y A K A   + + LA E+ +  +R N + P
Sbjct: 136 LPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEY-QQRLRVNCINP 194
Query: 181 WVIKTSM 187
              +T+M
Sbjct: 195 GGTRTAM 201

>pdb|2JJY|A Chain A, Crystal Structure Of Francisella Tularensis Enoyl Reductase (Ftfabi) With Bound Nad Length = 268

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 20/197 (10%)
Query: 56  CDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFH 115
           CD+ S ++ + L   +  ++ G L+ ++++ A A   P   +    +  V+   F     
Sbjct: 62  CDVISDQEIKDLFVELGKVWDG-LDAIVHSIAFA---PRDQLEGNFIDCVTREGFSIAHD 117
Query: 116 LSQLAHPLFKASG-------NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEW 168
           +S  +       G       N S+V ++ +G  + +PS +  G  K ++    +  A   
Sbjct: 118 ISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMPSYNTMGVAKASLEATVRYTALAL 177
Query: 169 AKDNIRTNTVAPWVIKT---SMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAF 225
            +D I+ N V+   IKT   S I  F+      + LD  A  +P+ +  +  EV + VAF
Sbjct: 178 GEDGIKVNAVSAGPIKTLAASGISNFK------KMLDYNAMVSPLKKNVDIMEVGNTVAF 231
Query: 226 LCLPAASYITGQIICVD 242
           LC   A+ ITG+++ VD
Sbjct: 232 LCSDMATGITGEVVHVD 248

>pdb|1MXH|A Chain A, Crystal Structure Of Substrate Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 114/266 (42%), Gaps = 35/266 (13%)
Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCD---- 57
            A++TGG R IGH+    L + G  V    R+      RL    N     +  +C     
Sbjct: 13  AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLS 72
Query: 58  --LSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTV--DIT--AEDMSTVSSTNFE 111
              S  +  E +I+     F G+ ++L+NNA+  +  P +  D T  A D   + +   E
Sbjct: 73  LSSSLLDCCEDIIDCSFRAF-GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAE 131
Query: 112 SVFHLSQLAHPLF------KASGNG--------SIVFISSVGGVRGIPSVSLYGAYKGAM 157
            +F  + +A PLF      +  G G        S+V +        +P   +Y   K A+
Sbjct: 132 -LFGSNAVA-PLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHAL 189
Query: 158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRA-GEP 216
             LT+  A E A  +IR N VAP +   S++ P        E+     R+ P+G++    
Sbjct: 190 GGLTRAAALELAPRHIRVNAVAPGL---SLLPPAMPQETQEEYR----RKVPLGQSEASA 242
Query: 217 DEVSSLVAFLCLPAASYITGQIICVD 242
            +++  +AFL    A YITG  + VD
Sbjct: 243 AQIADAIAFLVSKDAGYITGTTLKVD 268

>pdb|1E6W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And Estradiol Length = 260

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 60/258 (23%), Positives = 111/258 (43%), Gaps = 30/258 (11%)
Query: 1   MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
           + A++TGG  G+G +T + L   GA         + LD    E + +  K+ G+     +
Sbjct: 10  LVAVITGGASGLGLSTAKRLVGQGA-------TAVLLDVPNSEGETEAKKLGGNCIFAPA 62
Query: 61  REQREKLIETVTSIFQ---GKLNILINNAAIAFVKPTVD------ITAEDMSTVSSTNFE 111
               EK ++   ++ +   G++++ +N A IA    T         T ED   V + N  
Sbjct: 63  NVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVNLI 122
Query: 112 SVFHLSQLAHPLF------KASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLA 165
             F++ +L   +       +    G I+  +SV    G    + Y A KG +  +T  +A
Sbjct: 123 GTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIA 182
Query: 166 CEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPI-GRAGEPDEVSSLVA 224
            + A   IR  T+AP +  T ++    +     +  + +A Q P   R G+P E + LV 
Sbjct: 183 RDLAPIGIRVVTIAPGLFATPLLTTLPD-----KVRNFLASQVPFPSRLGDPAEYAHLVQ 237
Query: 225 FLCLPAASYITGQIICVD 242
            +      ++ G++I +D
Sbjct: 238 MVI--ENPFLNGEVIRLD 253

>pdb|3F5Q|A Chain A, Crystal Structure Of Putative Short Chain Dehydrogenase From Escherichia Coli Cft073 Length = 262

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 83/187 (44%), Gaps = 4/187 (2%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIEL-DARLHEWKNKGFKVTGSVCDL--SS 60
           LVTG + GIG       AR+GA V    RN+ +L     H  +  G +    + DL   +
Sbjct: 18  LVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCT 77
Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
            E  ++L + +   +     +L N   +  V P  +   +    V   N  + F L+Q  
Sbjct: 78  SEDCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQDPQVWQDVMQVNVNATFMLTQAL 137
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
            PL   S  GS+VF SS  G +G  +   Y A K A   + + LA E+ +  +R N + P
Sbjct: 138 LPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEY-QQRLRVNCINP 196
Query: 181 WVIKTSM 187
              +T+M
Sbjct: 197 GGTRTAM 203

>pdb|1E3S|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh Length = 261

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 60/258 (23%), Positives = 111/258 (43%), Gaps = 30/258 (11%)
Query: 1   MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
           + A++TGG  G+G +T + L   GA         + LD    E + +  K+ G+     +
Sbjct: 11  LVAVITGGASGLGLSTAKRLVGQGA-------TAVLLDVPNSEGETEAKKLGGNCIFAPA 63
Query: 61  REQREKLIETVTSIFQ---GKLNILINNAAIAFVKPTVD------ITAEDMSTVSSTNFE 111
               EK ++   ++ +   G++++ +N A IA    T         T ED   V + N  
Sbjct: 64  NVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVNLI 123
Query: 112 SVFHLSQLAHPLF------KASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLA 165
             F++ +L   +       +    G I+  +SV    G    + Y A KG +  +T  +A
Sbjct: 124 GTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIA 183
Query: 166 CEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPI-GRAGEPDEVSSLVA 224
            + A   IR  T+AP +  T ++    +     +  + +A Q P   R G+P E + LV 
Sbjct: 184 RDLAPIGIRVVTIAPGLFATPLLTTLPD-----KVRNFLASQVPFPSRLGDPAEYAHLVQ 238
Query: 225 FLCLPAASYITGQIICVD 242
            +      ++ G++I +D
Sbjct: 239 MVI--ENPFLNGEVIRLD 254

>pdb|3F5S|A Chain A, Crystal Structure Of Putatitve Short Chain Dehydrogenase From Shigella Flexneri 2a Str. 301 Length = 255

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 83/187 (44%), Gaps = 4/187 (2%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIEL-DARLHEWKNKGFKVTGSVCDL--SS 60
           LVTG + GIG       AR+GA V    RN+ +L     H  +  G +    + DL   +
Sbjct: 14  LVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCT 73
Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
            E  ++L + +   +     +L N   +  V P  +   +    V   N  + F L+Q  
Sbjct: 74  SENCQQLAQRIVVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQINVNATFMLTQAL 133
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
            PL   S  GS+VF SS  G +G  +   Y A K A   + + LA E+ +  +R N + P
Sbjct: 134 LPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEY-QQRLRVNCINP 192
Query: 181 WVIKTSM 187
              +T+M
Sbjct: 193 GGTRTAM 199

>pdb|1YB1|A Chain A, Crystal Structure Of Human 17-Beta-Hydroxysteroid Dehydrogenase Type Xi Length = 272

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 81/197 (41%), Gaps = 20/197 (10%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQ 63
           L+TG   GIG  T  E A+  + +     N+  L+    + K  G KV   V D S+RE 
Sbjct: 35  LITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNRED 94
Query: 64  REKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH-- 121
                + V +   G ++IL+NNA + +          D+        E  F ++ LAH  
Sbjct: 95  IYSSAKKVKAEI-GDVSILVNNAGVVY--------TSDLFATQDPQIEKTFEVNVLAHFW 145
Query: 122 ------PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNI-- 173
                 P    + +G IV ++S  G   +P +  Y + K A     K L  E A   I  
Sbjct: 146 TTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITG 205
Query: 174 -RTNTVAPWVIKTSMIK 189
            +T  + P  + T  IK
Sbjct: 206 VKTTCLCPNFVNTGFIK 222

>pdb|3G1T|A Chain A, Crystal Structure Of Short Chain Dehydrogenase From Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ct18 Length = 258

Iteration: 1
 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 82/190 (43%), Gaps = 9/190 (4%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELD------ARLHEWKNKGFKVTGSVCD 57
           LVTG + GIG       AR+GA V    RN+ +L       A     + + F +    C 
Sbjct: 18  LVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIADEQHVQPQWFTLDLLTC- 76
Query: 58  LSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLS 117
             + E+  ++ + + + +     +L N   +  + P  +   +    V   N  + F L+
Sbjct: 77  --TAEECRQVADRIAAHYPRLDGVLHNAGLLGEIGPMSEQDPQIWQDVMQVNVNATFMLT 134
Query: 118 QLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
           Q   PL   S  GS+VF SS  G +G  +   Y   K A   + + LA E+   ++R N 
Sbjct: 135 QALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYATSKFATEGMMQVLADEYQNRSLRVNC 194
Query: 178 VAPWVIKTSM 187
           + P   +TSM
Sbjct: 195 INPGGTRTSM 204

>pdb|1E3W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And 3-Keto Butyrate Length = 261

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 60/258 (23%), Positives = 110/258 (42%), Gaps = 30/258 (11%)
Query: 1   MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
           + A++TGG  G+G +T + L   GA         + LD    E + +  K+ G+     +
Sbjct: 11  LVAVITGGASGLGLSTAKRLVGQGA-------TAVLLDVPNSEGETEAKKLGGNCIFAPA 63
Query: 61  REQREKLIETVTSIFQ---GKLNILINNAAIAFVKPTVD------ITAEDMSTVSSTNFE 111
               EK ++   ++ +   G++++ +N A IA    T         T ED   V + N  
Sbjct: 64  NVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVNLI 123
Query: 112 SVFHLSQLAHPLF------KASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLA 165
             F++ +L   +       +    G I+  +SV    G    + Y A KG +  +T  +A
Sbjct: 124 GTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIA 183
Query: 166 CEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPI-GRAGEPDEVSSLVA 224
            + A   IR  T+AP +  T ++    +        + +A Q P   R G+P E + LV 
Sbjct: 184 RDLAPIGIRVVTIAPGLFATPLLTTLPD-----TVRNFLASQVPFPSRLGDPAEYAHLVQ 238
Query: 225 FLCLPAASYITGQIICVD 242
            +      ++ G++I +D
Sbjct: 239 MVI--ENPFLNGEVIRLD 254

>pdb|4DA9|A Chain A, Crystal Structure Of Putative Short-Chain DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 87/209 (41%), Gaps = 14/209 (6%)
Query: 41  LHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFV--KPTVDIT 98
           + E    G +V     DL+     +  ++ V + F G+++ L+NNA IA +     +D+ 
Sbjct: 71  IAELSGLGARVIFLRADLADLSSHQATVDAVVAEF-GRIDCLVNNAGIASIVRDDFLDLK 129
Query: 99  AEDMSTVSSTNFESVFHLSQLAHPLFKAS---GNGSIVFISSVGGVRGIPSVSLYGAYKG 155
            E+  T+   N       +Q       AS    + SI+ I+SV  V   P    Y   K 
Sbjct: 130 PENFDTIVGVNLRGTVFFTQAVLKAXLASDARASRSIINITSVSAVXTSPERLDYCXSKA 189
Query: 156 AMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQ--TPIGRA 213
            +   ++ LA   A+  I    V P +I++            S   DG+      P  R 
Sbjct: 190 GLAAFSQGLALRLAETGIAVFEVRPGIIRSDXTAAV------SGKYDGLIESGLVPXRRW 243
Query: 214 GEPDEVSSLVAFLCLPAASYITGQIICVD 242
           GEP+++ ++VA L      + TG +I  D
Sbjct: 244 GEPEDIGNIVAGLAGGQFGFATGSVIQAD 272

>pdb|4H15|A Chain A, Crystal Structure Of A Short Chain Alcohol Dehydrogenase-Related Dehydrogenase (Target Id Nysgrc-011812) From Sinorhizobium Meliloti 1021 In Space Group P21 Length = 261

Iteration: 1
 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 66/253 (26%), Positives = 115/253 (45%), Gaps = 25/253 (9%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           AL+T GT+G G ATV      GA V T +R + E      E   +    T   C + +  
Sbjct: 14  ALITAGTKGAGAATVSLFLELGAQVLTTARARPE--GLPEELFVEADLTTKEGCAIVAEA 71
Query: 63  QREKLIETVTSIFQGKLNILINN--AAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
            R++L         G ++++++    + A       ++ +D     S N  +   L +  
Sbjct: 72  TRQRL---------GGVDVIVHXLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQL 122
Query: 121 HPLFKASGNGSIVFISSVGGVRGIP-SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
            P   A G+G +V ++S+  V  +P S + Y A K A++  +K  + E +   +R   V+
Sbjct: 123 VPDXVARGSGVVVHVTSIQRVLPLPESTTAYAAAKAALSTYSKAXSKEVSPKGVRVVRVS 182
Query: 180 P-WVIKTSMIKPFEE-------GPEGSE--FLDGIARQTPIGRAGEPDEVSSLVAFLCLP 229
           P W+   + ++  E          EG +    DG+    P+GR  +P+EV++L+AFL   
Sbjct: 183 PGWIETEASVRLAERLAKQAGTDLEGGKKIIXDGLG-GIPLGRPAKPEEVANLIAFLASD 241
Query: 230 AASYITGQIICVD 242
            A+ ITG    +D
Sbjct: 242 RAASITGAEYTID 254

>pdb|3I1J|A Chain A, Structure Of A Putative Short Chain Dehydrogenase From Pseudomonas Syringae Length = 247

Iteration: 1
 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 80/180 (44%), Gaps = 16/180 (8%)
Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVK-PTVDITAEDMSTVSSTNFESVFHLSQLA 120
           +Q  +L   V   F G+L+ L++NA+I   + P   +  ED   V   N  + F L++  
Sbjct: 79  QQYRELAARVEHEF-GRLDGLLHNASIIGPRTPLEQLPDEDFXQVXHVNVNATFXLTRAL 137
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEW-AKDNIRTNTVA 179
            PL K S + SI F SS  G +G  +   YG  K A   L + LA E      +R N++ 
Sbjct: 138 LPLLKRSEDASIAFTSSSVGRKGRANWGAYGVSKFATEGLXQTLADELEGVTAVRANSIN 197
Query: 180 PWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
           P   +T        G     + D    + P+     P+++  +  +L  P ++ I GQ +
Sbjct: 198 PGATRT--------GXRAQAYPD----ENPLNNPA-PEDIXPVYLYLXGPDSTGINGQAL 244

>pdb|3P19|A Chain A, Improved Nadph-Dependent Blue Fluorescent Protein Length = 266

Iteration: 1
 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 54/242 (22%), Positives = 101/242 (41%), Gaps = 24/242 (9%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVC---DLSS 60
           ++TG + GIG A     +  G  +   +R    L         K   +  ++C   D++ 
Sbjct: 20  VITGASSGIGEAIARRFSEEGHPLLLLARRVERL---------KALNLPNTLCAQVDVTD 70
Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
           +   +  I     I+ G  + ++NNA +  +       A +   +   N   + +  Q  
Sbjct: 71  KYTFDTAITRAEKIY-GPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAV 129
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
               KA   G+I+ ISS+ G +  P  + Y   K A++ +++N+  E A  N+R  T+AP
Sbjct: 130 LAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAP 189
Query: 181 WVIKTSMIKPFEEGPEGSEFLDGI-ARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
             +KT ++          +  DG  A +  +G     D+V+  V F      +Y   Q +
Sbjct: 190 SAVKTELL----SHTTSQQIKDGYDAWRVDMGGVLAADDVARAVLF------AYQQPQNV 239
Query: 240 CV 241
           C+
Sbjct: 240 CI 241

>pdb|3PPI|A Chain A, Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenase Type-2 From Mycobacterium Avium Length = 281

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 107/254 (42%), Gaps = 25/254 (9%)
Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           +A+V+GG  G+G ATV  L   G  V        +  A   E  N+   V+    +++S 
Sbjct: 32  SAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVS---TNVTSE 88
Query: 62  EQREKLIETVTSIFQGKLNI-LINNAAIAFVKPTV--DITAEDMSTVSST---NFESVFH 115
           +     IE    +  G+L   ++ +      +  V  D +  DM   + T        ++
Sbjct: 89  DSVLAAIEAANQL--GRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYN 146
Query: 116 LSQLAHPLFKASG------NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA 169
           +++L      A+        G++V  +S+ G  G    + Y A K  +  LT   A + +
Sbjct: 147 VARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAAKAGVIGLTIAAARDLS 206
Query: 170 KDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPI-GRAGEPDEVSSLVAFLCL 228
              IR NT+AP  +KT +++       G E L   A   P   R G PDE +   AFL  
Sbjct: 207 SAGIRVNTIAPGTMKTPIMESV-----GEEALAKFAANIPFPKRLGTPDEFADAAAFLLT 261
Query: 229 PAASYITGQIICVD 242
               YI G+++ +D
Sbjct: 262 N--GYINGEVMRLD 273

>pdb|4IXT|A Chain A, Structure Of A 37-fold Mutant Of Halohydrin Dehalogenase (hhec) Bound To Ethyl (r)-4-cyano-3-hydroxybutyrate Length = 254

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 78/186 (41%), Gaps = 5/186 (2%)
Query: 60  SREQREKLIETVTSIFQGKLNILI-NNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQ 118
           S ++  +LIE VTS   G ++IL+ N+ A    +P      ED   +        F L+ 
Sbjct: 55  SEQEPVELIEAVTSAL-GHVDILVSNDIAPVEWRPIDKYAVEDYRDMVEALQIKPFALAN 113
Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
                 K   +G I+FI+S         +S Y + +   + L   L+ E  + NI    +
Sbjct: 114 AVASQMKRRKSGHIIFITSAASFGPWKELSTYASARAGASALANALSKELGEHNIPVFAI 173
Query: 179 APWVI---KTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT 235
           AP  +    +    P E      E +  + + T + R G   E+  LV FL   +  Y+T
Sbjct: 174 APNGVDSGDSPYYYPSEPWKTSPEHVAWVRKYTALQRLGTQKELGELVTFLASGSCDYLT 233
Query: 236 GQIICV 241
           GQ+  +
Sbjct: 234 GQVFWL 239

>pdb|3EK2|A Chain A, Crystal Structure Of Eonyl-(Acyl Carrier Protein) Reductase From Burkholderia Pseudomallei 1719b Length = 271

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 90/196 (45%), Gaps = 19/196 (9%)
Query: 56  CDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFH 115
           CD++   Q + L  ++ + +   L+ L+++   A   P   I  + +  ++  NF     
Sbjct: 71  CDVADDAQIDALFASLKTHWD-SLDGLVHSIGFA---PREAIAGDFLDGLTRENFRIAHD 126
Query: 116 LSQLAHP-LFKA-----SGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA 169
           +S  + P L KA     S + S++ +S +G  R IP+ +  G  K A+    + LA    
Sbjct: 127 ISAYSFPALAKAALPMLSDDASLLTLSYLGAERAIPNYNTMGLAKAALEASVRYLAVSLG 186
Query: 170 KDNIRTNTVAPWVIKT---SMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFL 226
              +R N ++   IKT   S IK F       + LD +   +P+ R    ++V +  AFL
Sbjct: 187 AKGVRVNAISAGPIKTLAASGIKSF------GKILDFVESNSPLKRNVTIEQVGNAGAFL 240
Query: 227 CLPAASYITGQIICVD 242
               AS +T +++ VD
Sbjct: 241 LSDLASGVTAEVMHVD 256

>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 105/253 (41%), Gaps = 17/253 (6%)
Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLS 59
           TALVTG T GIG A    L   GA V    R +  ++  + E + +     +   V DL 
Sbjct: 12  TALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLG 71
Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
           + +  + +IE        K++ILINN  I       DI  ED   +   N  S   L++ 
Sbjct: 72  TEQGCQDVIEKYP-----KVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIXSGVRLTRS 126
Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
                     G ++FI+S   +      + Y A K     L+++LA      N+  NT+ 
Sbjct: 127 YLKKXIERKEGRVIFIASEAAIXPSQEXAHYSATKTXQLSLSRSLAELTTGTNVTVNTIX 186
Query: 180 PWVIKTSMIK-------PFEEG--PEGSEFLDGIARQTP-IGRAGEPDEVSSLVAFLCLP 229
           P    T  ++       P E+    E  +      R T  I R   P+E++ LV FL  P
Sbjct: 187 PGSTLTEGVETXLNSLYPNEQLTIEEAEKRFXKENRPTSIIQRLIRPEEIAHLVTFLSSP 246
Query: 230 AASYITGQIICVD 242
            +S I G  + +D
Sbjct: 247 LSSAINGSALRID 259

>pdb|1P33|A Chain A, Pteridine Reductase From Leishmania Tarentolae Complex With Nadph And Mtx Length = 289

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/281 (24%), Positives = 111/281 (39%), Gaps = 50/281 (17%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIV----HTCSRNQIELDARLHEWK-NKGFKVTGSVCD 57
           ALVTG  + +G +  E L   G  V    H  + +   L A L+  + N    V   + +
Sbjct: 10  ALVTGAAKRLGSSIAEALHAEGYTVCLHYHRSAADASTLAATLNARRPNSAITVQADLSN 69
Query: 58  LSSREQREKLIETVTSIFQ-------------GKLNILINNAAIAFVKP----------- 93
           +++    E       ++F              G+ ++L+NNA+  +  P           
Sbjct: 70  VATASFSETDGSVPVTLFSRCSALVDACYMHWGRCDVLVNNASSFYPTPLLRKDAGEGGS 129
Query: 94  ------TVDITAEDMSTVSSTNFESVFHLSQLAHPLF--KASGNG---SIVFISSVGGVR 142
                 ++++ A D+    S      F +   A  +   +A   G   SIV +      +
Sbjct: 130 SVGDKESLEVAAADL--FGSNAIAPYFLIKAFAQRVADTRAEQRGTSYSIVNMVDAMTSQ 187
Query: 143 GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLD 202
            +   ++Y   K A+  LT++ A E A   IR N V+P +       PF          +
Sbjct: 188 PLLGYTMYTMAKEALEGLTRSAALELASLQIRVNGVSPGLSVLPDDMPFS-------VQE 240
Query: 203 GIARQTPI-GRAGEPDEVSSLVAFLCLPAASYITGQIICVD 242
              R+ P+  R    +EVS +V FLC P A YITG  I VD
Sbjct: 241 DYRRKVPLYQRNSSAEEVSDVVIFLCSPKAKYITGTCIKVD 281

>pdb|3QLJ|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Avium Length = 322

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 105/256 (41%), Gaps = 28/256 (10%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDAR-----------LHEWKNKGFKVT 52
           +VTG   GIG A     A  GA V   +   + LD             + E    G +  
Sbjct: 31  IVTGAGGGIGRAHALAFAAEGARV-VVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAV 89
Query: 53  GSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFES 112
               +++  +Q   LI+T    F G L++L+NNA I   +   + + E+   V + + + 
Sbjct: 90  ADGSNVADWDQAAGLIQTAVETF-GGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKG 148
Query: 113 VF----HLSQLAHPLFKASG--NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLAC 166
            F    H +     L KA    +G I+  SS  G++G      Y A K  +  LT   A 
Sbjct: 149 HFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGIATLTLVGAA 208
Query: 167 EWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFL 226
           E  +  +  N +AP   +T M +          F + +A Q     A  P+ VS LV +L
Sbjct: 209 EMGRYGVTVNAIAP-SARTRMTETV--------FAEMMATQDQDFDAMAPENVSPLVVWL 259
Query: 227 CLPAASYITGQIICVD 242
               A  +TG++  V+
Sbjct: 260 GSAEARDVTGKVFEVE 275

>pdb|3D5Q|A Chain A, Crystal Structure Of 11b-Hsd1 In Complex With Triazole Inhibitor Length = 272

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 15/173 (8%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG----FKVTGSVCDLS 59
           +VTG ++GIG      LA+ GA V   +R++  L   +      G      + G++ D++
Sbjct: 18  IVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMT 77
Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSST---NFESVFHL 116
             EQ             G L++LI N        ++++  +D+  V  +   NF S   L
Sbjct: 78  FAEQ----FVAQAGKLMGGLDMLILNH---ITNTSLNLFHDDIHHVRKSMEVNFLSYVVL 130
Query: 117 SQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA 169
           +  A P+ K S NGSIV +SS+ G    P V+ Y A K A++    ++  E++
Sbjct: 131 TVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYS 182

>pdb|3PDJ|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase 1 (11b-Hsd1) In Complex With 4,4-Disubstituted Cyclohexylbenzamide Inhibitor Length = 273

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 15/173 (8%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG----FKVTGSVCDLS 59
           +VTG ++GIG      LA+ GA V   +R++  L   +      G      + G++ D++
Sbjct: 19  IVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMT 78
Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSST---NFESVFHL 116
             EQ             G L++LI N        ++++  +D+  V  +   NF S   L
Sbjct: 79  FAEQ----FVAQAGKLMGGLDMLILNH---ITNTSLNLFHDDIHHVRKSMEVNFLSYVVL 131
Query: 117 SQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA 169
           +  A P+ K S NGSIV +SS+ G    P V+ Y A K A++    ++  E++
Sbjct: 132 TVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYS 183

>pdb|1XU7|A Chain A, Crystal Structure Of The Interface Open Conformation Of Tetrameric 11b-hsd1 Length = 286

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 15/173 (8%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG----FKVTGSVCDLS 59
           +VTG ++GIG      LA+ GA V   +R++  L   +      G      + G++ D++
Sbjct: 32  IVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMT 91
Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSST---NFESVFHL 116
             EQ             G L++LI N        ++++  +D+  V  +   NF S   L
Sbjct: 92  FAEQ----FVAQAGKLMGGLDMLILNH---ITNTSLNLFHDDIHHVRKSMEVNFLSYVVL 144
Query: 117 SQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA 169
           +  A P+ K S NGSIV +SS+ G    P V+ Y A K A++    ++  E++
Sbjct: 145 TVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYS 196

>pdb|2ILT|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Sulfone Inhibitor Length = 275

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 15/173 (8%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG----FKVTGSVCDLS 59
           +VTG ++GIG      LA+ GA V   +R++  L   +      G      + G++ D++
Sbjct: 28  IVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMT 87
Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSST---NFESVFHL 116
             EQ             G L++LI N        ++++  +D+  V  +   NF S   L
Sbjct: 88  FAEQ----FVAQAGKLMGGLDMLILNH---ITNTSLNLFHDDIHHVRKSMEVNFLSYVVL 140
Query: 117 SQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA 169
           +  A P+ K S NGSIV +SS+ G    P V+ Y A K A++    ++  E++
Sbjct: 141 TVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYS 192

>pdb|2BEL|A Chain A, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In Complex With Nadp And Carbenoxolone Length = 283

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 83/180 (46%), Gaps = 15/180 (8%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG----FKVTGSVCDLS 59
           +VTG ++GIG      LA+ GA V   +R++  L   +      G      + G++ D++
Sbjct: 35  IVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMT 94
Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSST---NFESVFHL 116
             EQ             G L++LI N        ++++  +D+  V  +   NF S   L
Sbjct: 95  FAEQ----FVAQAGKLMGGLDMLILNH---ITNTSLNLFHDDIHHVRKSMEVNFLSYVVL 147
Query: 117 SQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTN 176
           +  A P+ K S NGSIV +SS+ G    P V+ Y A K A++    ++  E++   +  +
Sbjct: 148 TVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVS 206

>pdb|3CH6|A Chain A, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r, F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3- Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone Length = 286

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 15/173 (8%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG----FKVTGSVCDLS 59
           +VTG ++GIG      LA+ GA V   +R++  L   +      G      + G++ D++
Sbjct: 32  IVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMT 91
Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSST---NFESVFHL 116
             EQ             G L++LI N        ++++  +D+  V  +   NF S   L
Sbjct: 92  FAEQ----FVAQAGKLMGGLDMLILNH---ITNTSLNLFHDDIHHVRKSMEVNFLSYVVL 144
Query: 117 SQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA 169
           +  A P+ K S NGSIV +SS+ G    P V+ Y A K A++    ++  E++
Sbjct: 145 TVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYS 196

>pdb|2RBE|A Chain A, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1 Inhibitors Length = 275

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 15/173 (8%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG----FKVTGSVCDLS 59
           +VTG ++GIG      LA+ GA V   +R++  L   +      G      + G++ D++
Sbjct: 21  IVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMT 80
Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSST---NFESVFHL 116
             EQ             G L++LI N        ++++  +D+  V  +   NF S   L
Sbjct: 81  FAEQ----FVAQAGKLMGGLDMLILNH---ITNTSLNLFHDDIHHVRKSMEVNFLSYVVL 133
Query: 117 SQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA 169
           +  A P+ K S NGSIV +SS+ G    P V+ Y A K A++    ++  E++
Sbjct: 134 TVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYS 185

>pdb|2IRW|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Ether Inhibitor Length = 264

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 15/173 (8%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG----FKVTGSVCDLS 59
           +VTG ++GIG      LA+ GA V   +R++  L   +      G      + G++ D++
Sbjct: 13  IVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMT 72
Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSST---NFESVFHL 116
             EQ             G L++LI N        ++++  +D+  V  +   NF S   L
Sbjct: 73  FAEQ----FVAQAGKLMGGLDMLILNH---ITNTSLNLFHDDIHHVRKSMEVNFLSYVVL 125
Query: 117 SQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA 169
           +  A P+ K S NGSIV +SS+ G    P V+ Y A K A++    ++  E++
Sbjct: 126 TVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYS 177

>pdb|3PXX|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nicotinamide Adenine Dinucleotide Length = 287

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 107/272 (39%), Gaps = 38/272 (13%)
Query: 4   LVTGGTRGIGHATVEELARFGA------IVHTCSRNQI------ELDARLHEWKNKGFKV 51
           LVTGG RG G +   +LA  GA      I H    N+       +L+    E +  G K 
Sbjct: 14  LVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKA 73
Query: 52  TGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFE 111
             +  D+  R    + +    + F GKL++++ NA I  +   + + A   +     +F 
Sbjct: 74  YTAEVDVRDRAAVSRELANAVAEF-GKLDVVVANAGICPLGAHLPVQA--FADAFDVDFV 130
Query: 112 SVFHLSQLAHPLFKASGNGSIVFISSVGGV-----------RGIPSVSLYGAYKGAMNQL 160
            V +    A P    +   SI+   SV G+              P  + Y   K  ++  
Sbjct: 131 GVINTVHAALPYL--TSGASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAKQLVDSY 188
Query: 161 TKNLACEWAKDNIRTNTVAPWVIKTSMI---------KPFEEGPEGSEFLDGI-ARQTPI 210
           T  LA + A  +IR N + P  + T M+         +P  E P  ++ L    A Q   
Sbjct: 189 TLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFPAMQAMP 248
Query: 211 GRAGEPDEVSSLVAFLCLPAASYITGQIICVD 242
               E  ++S+ V FL    + Y+TG    VD
Sbjct: 249 TPYVEASDISNAVCFLASDESRYVTGLQFKVD 280

>pdb|4BB5|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 15/173 (8%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG----FKVTGSVCDLS 59
           +VTG ++GIG      LA+ GA V   +R++  L   +      G      + G++ D++
Sbjct: 38  IVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMT 97
Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSST---NFESVFHL 116
             EQ             G L++LI N        ++++  +D+  V  +   NF S   L
Sbjct: 98  FAEQ----FVAQAGKLMGGLDMLILNH---ITNTSLNLFHDDIHHVRKSMEVNFLSYVVL 150
Query: 117 SQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA 169
           +  A P+ K S NGSIV +SS+ G    P V+ Y A K A++    ++  E++
Sbjct: 151 TVAALPMLKQS-NGSIVVVSSLAGKVAYPLVAAYSASKFALDGFFSSIRKEYS 202

>pdb|1A27|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 C-Terminal Deletion Mutant Complexed With Estradiol And Nadp+ Length = 289

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 69/146 (47%), Gaps = 21/146 (14%)
Query: 74  IFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIV 133
           + +G++++L+ NA +  + P   +  + +++V   N      + Q   P  K  G+G ++
Sbjct: 79  VTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVL 138
Query: 134 FISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE 193
              SVGG+ G+P   +Y A K A+  L ++LA            + P+ +  S+I   E 
Sbjct: 139 VTGSVGGLMGLPFNDVYCASKFALEGLCESLAV----------LLLPFGVHLSLI---EC 185
Query: 194 GPEGSEFLDGIARQTPIGRAGEPDEV 219
           GP  + F++ +         G P+EV
Sbjct: 186 GPVHTAFMEKV--------LGSPEEV 203

>pdb|4HFR|A Chain A, Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In Complex With An Orally Bioavailable Acidic Inhibitor Azd4017. Length = 272

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 15/173 (8%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG----FKVTGSVCDLS 59
           +VTG ++GIG      LA+ GA V   +R++  L   +      G      + G++ D++
Sbjct: 18  IVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMT 77
Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSST---NFESVFHL 116
             EQ             G L++LI N        ++++  +D+  V  +   NF S   L
Sbjct: 78  FAEQ----FVAQAGKLMGGLDMLILNH---ITNTSLNLFHDDIHHVRKSMEVNFLSYVVL 130
Query: 117 SQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA 169
           +  A P+ K S NGSIV +SS+ G    P V+ Y A K A++    ++  E++
Sbjct: 131 TVAALPMLKQS-NGSIVVVSSLAGKVAYPLVAAYSASKFALDGFFSSIRKEYS 182

>pdb|4BB6|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 15/173 (8%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG----FKVTGSVCDLS 59
           +VTG ++GIG      LA+ GA V   +R++  L   +      G      + G++ D++
Sbjct: 38  IVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMT 97
Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSST---NFESVFHL 116
             EQ             G L++LI N        ++++  +D+  V  +   NF S   L
Sbjct: 98  FAEQ----FVAQAGKLMGGLDMLILNH---ITNTSLNLFHDDIHHVRKSMEVNFLSYVVL 150
Query: 117 SQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA 169
           +  A P+ K S NGSIV +SS+ G    P V+ Y A K A++    ++  E++
Sbjct: 151 TVAALPMLKQS-NGSIVVVSSLAGKVAYPLVAAYSASKFALDGFFSSIRKEYS 202

>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 83/192 (43%), Gaps = 9/192 (4%)
Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLH--EWKNKGFKVTGSVCDLS 59
           TA VTGG  G+G   V +L   G  V      Q  +D  L   E +  G +V G   D++
Sbjct: 10  TAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVA 69
Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
           SRE  +   + V + F G ++IL NNA +   +P  + + +D   +   N   V +    
Sbjct: 70  SREGFKMAADEVEARF-GPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTT 128
Query: 120 AHPLF----KA--SGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNI 173
             P      KA     G +V  +S+       S  +Y   K A+  L+++L     K  I
Sbjct: 129 FVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESLHYSLLKYEI 188
Query: 174 RTNTVAPWVIKT 185
             + + P ++K+
Sbjct: 189 GVSVLCPGLVKS 200

>pdb|2PFG|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Bigf2 Length = 276

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 69/150 (46%), Gaps = 10/150 (6%)
Query: 3   ALVTGGTRGIGHATVEELAR-FGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           ALVTGG +GIG A V +L R F   V   +R+     A + + + +G        D+   
Sbjct: 7   ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDL 66
Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAF--VKPT-VDITAEDMSTVSSTNFESVFHLSQ 118
           +    L + +   + G L++L+NNA IAF    PT   I AE       TNF     +  
Sbjct: 67  QSIRALRDFLRKEY-GGLDVLVNNAGIAFKVADPTPFHIQAE---VTMKTNFFGTRDVXT 122
Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIPSVS 148
              PL K  G   +V +SS+  VR + S S
Sbjct: 123 ELLPLIKPQGR--VVNVSSIMSVRALKSCS 150

>pdb|2HRB|A Chain A, Crystal Structure Of Human Carbonyl Reductase 3, Complexed With Nadp+ Length = 274

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 69/150 (46%), Gaps = 10/150 (6%)
Query: 3   ALVTGGTRGIGHATVEELAR-FGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           ALVTG  RGIG A   EL R F   V   +R+     A + + + +G        D+   
Sbjct: 5   ALVTGANRGIGLAIARELCRQFSGDVVLTARDVARGQAAVQQLQAEGLSPRFHQLDIDDL 64
Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPT---VDITAEDMSTVSSTNFESVFHLSQ 118
           +    L + +   + G LN+L+NNAA+AF        DI AE       TNF +  ++  
Sbjct: 65  QSIRALRDFLRKEY-GGLNVLVNNAAVAFKSDDPMPFDIKAE---MTLKTNFFATRNMCN 120
Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIPSVS 148
              P+ K   +G +V ISS+  +R   + S
Sbjct: 121 ELLPIMKP--HGRVVNISSLQCLRAFENCS 148

>pdb|1WMA|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Hydroxy-pp Length = 276

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 69/150 (46%), Gaps = 10/150 (6%)
Query: 3   ALVTGGTRGIGHATVEELAR-FGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           ALVTGG +GIG A V +L R F   V   +R+     A + + + +G        D+   
Sbjct: 7   ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDL 66
Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAF--VKPT-VDITAEDMSTVSSTNFESVFHLSQ 118
           +    L + +   + G L++L+NNA IAF    PT   I AE       TNF     +  
Sbjct: 67  QSIRALRDFLRKEY-GGLDVLVNNAGIAFKVADPTPFHIQAE---VTMKTNFFGTRDVCT 122
Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIPSVS 148
              PL K  G   +V +SS+  VR + S S
Sbjct: 123 ELLPLIKPQGR--VVNVSSIMSVRALKSCS 150

>pdb|3F1K|A Chain A, Crystal Structure Of Ycik From E. Coli, An Oxidoreductase, Complexed With Nadp+ At 2.6a Resolution Length = 252

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 82/187 (43%), Gaps = 4/187 (2%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIEL-DARLHEWKNKGFKVTGSVCDL--SS 60
           LVTG + GIG       AR+GA V    RN+ +L     H  +  G +    + DL   +
Sbjct: 16  LVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCT 75
Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
            E  ++L + +   +     +L N   +  V P  +   +    V   N  + F L+Q  
Sbjct: 76  SENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPXSEQNPQVWQDVXQVNVNATFXLTQAL 135
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
            PL   S  GS+VF SS  G +G  +   Y A K A     + LA E+ +  +R N + P
Sbjct: 136 LPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGXXQVLADEY-QQRLRVNCINP 194
Query: 181 WVIKTSM 187
              +T+M
Sbjct: 195 GGTRTAM 201

>pdb|1FDU|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant H221l Complexed With Estradiol And Nadp+ Length = 327

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 69/146 (47%), Gaps = 21/146 (14%)
Query: 74  IFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIV 133
           + +G++++L+ NA +  + P   +  + +++V   N      + Q   P  K  G+G ++
Sbjct: 79  VTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVL 138
Query: 134 FISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE 193
              SVGG+ G+P   +Y A K A+  L ++LA            + P+ +  S+I   E 
Sbjct: 139 VTGSVGGLMGLPFNDVYCASKFALEGLCESLAV----------LLLPFGVHLSLI---EC 185
Query: 194 GPEGSEFLDGIARQTPIGRAGEPDEV 219
           GP  + F++ +         G P+EV
Sbjct: 186 GPVHTAFMEKV--------LGSPEEV 203

>pdb|3KSU|A Chain A, Crystal Structure Of Short-Chain Dehydrogenase From Oenococcus Oeni Psu-1 Length = 262

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/243 (23%), Positives = 103/243 (42%), Gaps = 13/243 (5%)
Query: 4   LVTGGTRGIGHATVEELA--RFGAIVHTCSRNQIELDARLH-EWKNKGFKVTGSVCDLSS 60
           ++ GG + +G  T +  A      ++H       +   +L  E +++G KV     DLS+
Sbjct: 15  VIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSN 74
Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFE-SVFHLSQL 119
            E+  KL +     F GK++I IN       KP V+ +  +   + + N + + F + Q 
Sbjct: 75  EEEVAKLFDFAEKEF-GKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQA 133
Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
           A  +   + NG I+ I++          S Y   K  +   T+  + E  K  I  N +A
Sbjct: 134 AKHM---NPNGHIITIATSLLAAYTGFYSTYAGNKAPVEHYTRAASKELMKQQISVNAIA 190
Query: 180 PWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
           P  + TS     +E  E + F    A    + +    ++++ ++ FL      +I GQ I
Sbjct: 191 PGPMDTSFFYG-QETKESTAFHKSQAMGNQLTKI---EDIAPIIKFLTTDGW-WINGQTI 245
Query: 240 CVD 242
             +
Sbjct: 246 FAN 248

>pdb|1FDW|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant H221q Complexed With Estradiol Length = 327

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 69/146 (47%), Gaps = 21/146 (14%)
Query: 74  IFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIV 133
           + +G++++L+ NA +  + P   +  + +++V   N      + Q   P  K  G+G ++
Sbjct: 79  VTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVL 138
Query: 134 FISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE 193
              SVGG+ G+P   +Y A K A+  L ++LA            + P+ +  S+I   E 
Sbjct: 139 VTGSVGGLMGLPFNDVYCASKFALEGLCESLAV----------LLLPFGVHLSLI---EC 185
Query: 194 GPEGSEFLDGIARQTPIGRAGEPDEV 219
           GP  + F++ +         G P+EV
Sbjct: 186 GPVHTAFMEKV--------LGSPEEV 203

>pdb|1EQU|A Chain A, Type 1 17-Beta Hydroxysteroid Dehydrogenase Equilin Complexed With Nadp+ Length = 327

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 69/146 (47%), Gaps = 21/146 (14%)
Query: 74  IFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIV 133
           + +G++++L+ NA +  + P   +  + +++V   N      + Q   P  K  G+G ++
Sbjct: 79  VTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVL 138
Query: 134 FISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE 193
              SVGG+ G+P   +Y A K A+  L ++LA            + P+ +  S+I   E 
Sbjct: 139 VTGSVGGLMGLPFNDVYCASKFALEGLCESLAV----------LLLPFGVHLSLI---EC 185
Query: 194 GPEGSEFLDGIARQTPIGRAGEPDEV 219
           GP  + F++ +         G P+EV
Sbjct: 186 GPVHTAFMEKV--------LGSPEEV 203

>pdb|1FDS|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Complexed With 17- Beta-Estradiol Length = 327

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 69/146 (47%), Gaps = 21/146 (14%)
Query: 74  IFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIV 133
           + +G++++L+ NA +  + P   +  + +++V   N      + Q   P  K  G+G ++
Sbjct: 79  VTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVL 138
Query: 134 FISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE 193
              SVGG+ G+P   +Y A K A+  L ++LA            + P+ +  S+I   E 
Sbjct: 139 VTGSVGGLMGLPFNDVYCASKFALEGLCESLAV----------LLLPFGVHLSLI---EC 185
Query: 194 GPEGSEFLDGIARQTPIGRAGEPDEV 219
           GP  + F++ +         G P+EV
Sbjct: 186 GPVHTAFMEKV--------LGSPEEV 203

>pdb|1IOL|A Chain A, Estrogenic 17-beta Hydroxysteroid Dehydrogenase Complexed 17-beta- Estradiol Length = 327

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 69/146 (47%), Gaps = 21/146 (14%)
Query: 74  IFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIV 133
           + +G++++L+ NA +  + P   +  + +++V   N      + Q   P  K  G+G ++
Sbjct: 79  VTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLEVNVVGTVRMLQAFLPDMKRRGSGRVL 138
Query: 134 FISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE 193
              SVGG+ G+P   +Y A K A+  L ++LA            + P+ +  S+I   E 
Sbjct: 139 VTGSVGGLMGLPFNDVYCASKFALEGLCESLAV----------LLLPFGVHLSLI---EC 185
Query: 194 GPEGSEFLDGIARQTPIGRAGEPDEV 219
           GP  + F++ +         G P+EV
Sbjct: 186 GPVHTAFMEKV--------LGSPEEV 203

>pdb|1PWX|A Chain A, Crystal Structure Of The Haloalcohol Dehalogenase Hhec Complexed With Bromide Length = 254

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 77/186 (41%), Gaps = 5/186 (2%)
Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQ 118
           S ++  +LIE VTS + G++++L++N   A   +P      ED            F L  
Sbjct: 55  SEQEPAELIEAVTSAY-GQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVN 113
Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
                 K   +G I+FI+S         +S Y + +     L   L+ E  + NI    +
Sbjct: 114 AVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAI 173
Query: 179 APWVIKTS---MIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT 235
            P  + +       P E      E +  + + T + R G   E+  LVAFL   +  Y+T
Sbjct: 174 GPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYLT 233
Query: 236 GQIICV 241
           GQ+  +
Sbjct: 234 GQVFWL 239

>pdb|1N5D|A Chain A, Crystal Structure Of Porcine Testicular Carbonyl Reductase 20beta-Hydroxysteroid Dehydrogenase Length = 288

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 69/150 (46%), Gaps = 10/150 (6%)
Query: 3   ALVTGGTRGIGHATVEELAR-FGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           ALVTG  +GIG A V +L R F   V   +R+     A + + + +G        D+   
Sbjct: 7   ALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRFHQLDIIDL 66
Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFV--KPT-VDITAEDMSTVSSTNFESVFHLSQ 118
           +    L + +   + G L++L+NNAAIAF    PT   I AE       TNF    ++  
Sbjct: 67  QSIRALCDFLRKEY-GGLDVLVNNAAIAFQLDNPTPFHIQAE---LTMKTNFMGTRNVCT 122
Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIPSVS 148
              PL K  G   +V +SS  GVR +   S
Sbjct: 123 ELLPLIKPQGR--VVNVSSTEGVRALNECS 150

>pdb|3UCE|A Chain A, Crystal Structure Of A Small-Chain Dehydrogenase In Complex With Nadph Length = 223

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 102/245 (41%), Gaps = 43/245 (17%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQ 63
           +V GGT GIG    ++L     IVH  SR                   TG   D+S  + 
Sbjct: 10  VVLGGTSGIGAELAKQLESEHTIVHVASRQ------------------TG--LDISDEKS 49
Query: 64  REKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA--H 121
                ET+ +      ++++   + A     VD+      T +   F++ F  + LA  H
Sbjct: 50  VYHYFETIGAFD----HLIVTAGSYAPAGKVVDVEV----TQAKYAFDTKFWGAVLAAKH 101
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
                   GSI   S +   + + +  +  A   A+   TK LA E A   IR N ++P 
Sbjct: 102 GARYLKQGGSITLTSGMLSRKVVANTYVKAAINAAIEATTKVLAKELAP--IRVNAISPG 159
Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQT----PIGRAGEPDEVSSLVAFLCLPAASYITGQ 237
           + KT   K        ++  D + ++T    P+G+ GE  +++  +A+L     SY+TG 
Sbjct: 160 LTKTEAYKGMN-----ADDRDAMYQRTQSHLPVGKVGEASDIA--MAYLFAIQNSYMTGT 212
Query: 238 IICVD 242
           +I VD
Sbjct: 213 VIDVD 217

>pdb|4EIT|A Chain A, Crystal Structure Of An Enoyl-(Acyl Carrier Protein) Reductase From Bartonella Henselae Length = 276

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 22/205 (10%)
Query: 47  KGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPT------VDITAE 100
           KGF V G  CD+S     + +  T+   + GKL+ L++  AI F          VDI+  
Sbjct: 64  KGF-VCGH-CDVSDSASIDAVFNTIEKKW-GKLDFLVH--AIGFSDKEELSGRYVDISES 118
Query: 101 DMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160
           +     + +  S+  L++ A  L   S  GSI+ ++  G  + +P+ ++ G  K A+   
Sbjct: 119 NFXXTXNISVYSLTALTKRAEKL--XSDGGSILTLTYYGAEKVVPNYNVXGVAKAALEAS 176
Query: 161 TKNLACEWAKDNIRTNTVAPWVIKT---SMIKPFEEGPEGSEFLDGIARQTPIGRAGEPD 217
            K LA +    +IR N ++   IKT   S I  F    + +E+        P+ R    +
Sbjct: 177 VKYLAVDLGPKHIRVNAISAGPIKTLAASGIGDFRYILKWNEY------NAPLRRTVTIE 230
Query: 218 EVSSLVAFLCLPAASYITGQIICVD 242
           EV     +L    +  +TG++  VD
Sbjct: 231 EVGDSALYLLSDLSRSVTGEVHHVD 255

>pdb|3TL3|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 257

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 104/257 (40%), Gaps = 36/257 (14%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDAR----LHEWKNKGFKVTGSVCDL 58
           A+VTGG  G+G AT + L   GA V       + LD R    + +  ++       V D 
Sbjct: 12  AVVTGGASGLGLATTKRLLDAGAQV-------VVLDIRGEDVVADLGDRARFAAADVTDE 64
Query: 59  SSREQREKLIETVTSIFQGKLNILINNA----AIAFVKPTVDITAEDMSTVSSTNFESVF 114
           ++      L ET+     G L I++N A    AI  +      +      +   N    F
Sbjct: 65  AAVASALDLAETM-----GTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSF 119
Query: 115 HLSQLA-------HPLF-KASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLAC 166
           ++ +LA        P+   A   G I+  +SV    G    + Y A KG +  +T  +A 
Sbjct: 120 NVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIAR 179
Query: 167 EWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTP-IGRAGEPDEVSSLVAF 225
           + A   IR  T+AP +  T ++    E    S     + +Q P   R G PDE  +L   
Sbjct: 180 DLASHRIRVMTIAPGLFDTPLLASLPEEARAS-----LGKQVPHPSRLGNPDEYGALAVH 234
Query: 226 LCLPAASYITGQIICVD 242
           +       + G++I +D
Sbjct: 235 II--ENPMLNGEVIRLD 249

>pdb|3E03|A Chain A, Crystal Structure Of A Putative Dehydrogenase From Xanthomonas Campestris Length = 274

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 81/206 (39%), Gaps = 27/206 (13%)
Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQI---ELDARLHEWKNKGFKVTGS---- 54
           T  +TG +RGIG A     AR GA V   +++ +   +L   +H          G     
Sbjct: 8   TLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLAL 67
Query: 55  VCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVF 114
            CD+   +Q    +      F G ++IL+NNA+  +++ T+D   +        N    F
Sbjct: 68  KCDIREEDQVRAAVAATVDTF-GGIDILVNNASAIWLRGTLDTPXKRFDLXQQVNARGSF 126
Query: 115 HLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGA----------MNQLTKNL 164
             +Q   P    + N  I+ ++        P  SL  A+ GA           + +T  L
Sbjct: 127 VCAQACLPHLLQAPNPHILTLA--------PPPSLNPAWWGAHTGYTLAKXGXSLVTLGL 178
Query: 165 ACEWAKDNIRTNTVAPW-VIKTSMIK 189
           A E+    +  N + P  VI T  I 
Sbjct: 179 AAEFGPQGVAINALWPRTVIATDAIN 204

>pdb|3E9Q|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase From Shigella Flexneri Length = 273

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 81/186 (43%), Gaps = 4/186 (2%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIEL-DARLHEWKNKGFKVTGSVCDL--SS 60
           LVTG + GIG       AR+GA V    RN+ +L     H  +  G +    + DL   +
Sbjct: 37  LVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCT 96
Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
            E  ++L + +   +     +L N   +  V P  +   +    V   N  + F L+Q  
Sbjct: 97  SENCQQLAQRIVVNYPRLDGVLHNAGLLGDVCPXSEQNPQVWQDVXQINVNATFXLTQAL 156
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
            PL   S  GS+VF SS  G +G  +   Y A K A     + LA E+ +  +R N + P
Sbjct: 157 LPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGXXQVLADEY-QQRLRVNCINP 215
Query: 181 WVIKTS 186
              +T+
Sbjct: 216 GGTRTA 221

>pdb|1XSE|A Chain A, Crystal Structure Of Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Length = 295

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 77/181 (42%), Gaps = 17/181 (9%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELD---ARLHEW-KNKGFKVTGSVCDLS 59
           +VTG ++GIG      LA+ GA V   +R++  L    AR  E        + GS+ D++
Sbjct: 36  IVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAGSMEDMT 95
Query: 60  SREQREKLIETVTSIFQGKLNILINNAA----IAFVKPTVDITAEDMSTVSSTNFESVFH 115
             E+             G L++LI N      + F    +D   + M      NF S   
Sbjct: 96  FAEE----FVAEAGNLMGGLDMLILNHVLYNRLTFFHGEIDNVRKSM----EVNFHSFVV 147
Query: 116 LSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
           LS  A P+   S  GSI  +SSV G    P ++ Y A K A++     L  E+  + +  
Sbjct: 148 LSVAAMPMLMQS-QGSIAVVSSVAGKITYPLIAPYSASKFALDGFFSTLRSEFLVNKVNV 206
Query: 176 N 176
           +
Sbjct: 207 S 207

>pdb|3LZ6|A Chain A, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With Pf-877423 Length = 263

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 77/181 (42%), Gaps = 17/181 (9%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELD---ARLHEW-KNKGFKVTGSVCDLS 59
           +VTG ++GIG      LA+ GA V   +R++  L    AR  E        + GS+ D++
Sbjct: 13  IVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAGSMEDMT 72
Query: 60  SREQREKLIETVTSIFQGKLNILINNAA----IAFVKPTVDITAEDMSTVSSTNFESVFH 115
             E+             G L++LI N      + F    +D   + M      NF S   
Sbjct: 73  FAEE----FVAEAGNLMGGLDMLILNHVLYNRLTFFHGEIDNVRKSM----EVNFHSFVV 124
Query: 116 LSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
           LS  A P+   S  GSI  +SSV G    P ++ Y A K A++     L  E+  + +  
Sbjct: 125 LSVAAMPMLMQS-QGSIAVVSSVAGKITYPLIAPYSASKFALDGFFSTLRSEFLVNKVNV 183
Query: 176 N 176
           +
Sbjct: 184 S 184

>pdb|3GMD|A Chain A, Structure-Based Design Of 7-Azaindole-Pyrrolidines As Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I Length = 264

Iteration: 1
 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 15/172 (8%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG----FKVTGSVCDLS 59
           +VTG ++GIG      L++ GA V   +R++  L   +      G      + G++ D++
Sbjct: 13  IVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGAASAHYIAGTMEDMT 72
Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVS---STNFESVFHL 116
             EQ             G L++LI N      + ++ +  +D+ +V      NF S   +
Sbjct: 73  FAEQ----FIVKAGKLMGGLDMLILNH---ITQTSLSLFHDDIHSVRRVMEVNFLSYVVM 125
Query: 117 SQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEW 168
           S  A P+ K S NGSI  ISS+ G    P V+ Y A K A++     +  E 
Sbjct: 126 STAALPMLKQS-NGSIAVISSLAGKVTYPMVAPYSASKFALDGFFSTIRTEL 176

>pdb|3G49|A Chain A, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of Pf-915275 Length = 277

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 77/181 (42%), Gaps = 17/181 (9%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELD---ARLHEW-KNKGFKVTGSVCDLS 59
           +VTG ++GIG      LA+ GA V   +R++  L    AR  E        + GS+ D++
Sbjct: 15  IVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAGSMEDMT 74
Query: 60  SREQREKLIETVTSIFQGKLNILINNAA----IAFVKPTVDITAEDMSTVSSTNFESVFH 115
             E+             G L++LI N      + F    +D   + M      NF S   
Sbjct: 75  FAEE----FVAEAGNLMGGLDMLILNHVLYNRLTFFHGEIDNVRKSM----EVNFHSFVV 126
Query: 116 LSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
           LS  A P+   S  GSI  +SSV G    P ++ Y A K A++     L  E+  + +  
Sbjct: 127 LSVAAMPMLMQS-QGSIAVVSSVAGKITYPLIAPYSASKFALDGFFSTLRSEFLVNKVNV 185
Query: 176 N 176
           +
Sbjct: 186 S 186

>pdb|2XOX|A Chain A, Crystal Structure Of Pteridine Reductase (Ptr1) From Leishmania Donovani Length = 288

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/282 (23%), Positives = 103/282 (36%), Gaps = 52/282 (18%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIV----HTCSRNQIELDARLHEWK-NKGFKVTGSVCD 57
           ALVTG  + +G    E L   G  V    H  +     L A L+  + N    V   + +
Sbjct: 9   ALVTGAAKRLGSGIAEGLHAEGYAVCLHYHRSAAEANTLAATLNARRPNSAIPVQADLSN 68
Query: 58  LSSREQREKLIETVTSIFQ-------------GKLNILINNAAIAFVKP----------- 93
           ++             ++F+             G+ ++L+NNA+  +  P           
Sbjct: 69  VAKAPAGGADGAAPVTLFKRCADLVAACYTHWGRCDVLVNNASSFYPTPLLRKDEDGHVP 128
Query: 94  ------TVDITAEDMSTVSSTNFESVFHLSQLAH-----PLFKASGNGSIVFISSVGGVR 142
                  ++  A D+    S      F +   AH     P  +   N SIV +      +
Sbjct: 129 CVGDREAMEAAAADL--FGSNAMAPYFLIKAFAHRVADTPAEQRGTNYSIVNMVDAMTSQ 186
Query: 143 GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW--VIKTSMIKPFEEGPEGSEF 200
            +   ++Y   KGA+  LT++ A E A   IR N V P   V+   M     E       
Sbjct: 187 PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLADDMPPAVRE------- 239
Query: 201 LDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 242
            D  ++     R     EVS +V FLC   A Y+TG  + VD
Sbjct: 240 -DYRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYVTGTCVKVD 280

>pdb|3DWF|A Chain A, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Mutant F278e Length = 276

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 77/181 (42%), Gaps = 17/181 (9%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELD---ARLHEW-KNKGFKVTGSVCDLS 59
           +VTG ++GIG      LA+ GA V   +R++  L    AR  E        + GS+ D++
Sbjct: 15  IVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAGSMEDMT 74
Query: 60  SREQREKLIETVTSIFQGKLNILINNAA----IAFVKPTVDITAEDMSTVSSTNFESVFH 115
             E+             G L++LI N      + F    +D   + M      NF S   
Sbjct: 75  FAEE----FVAEAGNLMGGLDMLILNHVLYNRLTFFHGEIDNVRKSM----EVNFHSFVV 126
Query: 116 LSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
           LS  A P+   S  GSI  +SSV G    P ++ Y A K A++     L  E+  + +  
Sbjct: 127 LSVAAMPMLMQS-QGSIAVVSSVAGKITYPLIAPYSASKFALDGFFSTLRSEFLVNKVNV 185
Query: 176 N 176
           +
Sbjct: 186 S 186

>pdb|3TN7|A Chain A, Crystal Structure Of Short-Chain Alcohol Dehydrogenase From Hyperthermophilic Archaeon Thermococcus Sibiricus Complexed With 5- Hydroxy-Nadp Length = 257

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 88/199 (44%), Gaps = 10/199 (5%)
Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE-WKNKGFKVTGSVCDLSS 60
            A++TG +RGIG A    LAR G  +   +R+   L+   HE  + +G +V     D+S 
Sbjct: 26  VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSK 85
Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
            E  E+  + V   F G +++++ NA + + K   +++ E+   +   N   V+   +  
Sbjct: 86  AESVEEFSKKVLERF-GDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAF 144
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
               K +G  ++V  S V   R IP    Y + K A   L +    E    ++R   + P
Sbjct: 145 LDSLKRTGGLALVTTSDVSA-RLIPYGGGYVSTKWAARALVRTFQIE--NPDVRFFELRP 201
Query: 181 WVIKTSM-----IKPFEEG 194
             + T        KP E+G
Sbjct: 202 GAVDTYFGGSKPGKPKEKG 220

>pdb|3L77|A Chain A, X-Ray Structure Alcohol Dehydrogenase From Archaeon Thermococcus Sibiricus Complexed With 5-Hydroxy-Nadp Length = 235

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 5/185 (2%)
Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE-WKNKGFKVTGSVCDLSS 60
            A++TG +RGIG A    LAR G  +   +R+   L+   HE  + +G +V     D+S 
Sbjct: 4   VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSK 63
Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
            E  E+  + V   F G +++++ NA + + K   +++ E+   +   N   V+   +  
Sbjct: 64  AESVEEFSKKVLERF-GDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAF 122
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
               K +G  ++V  S V   R IP    Y + K A   L +    E    ++R   + P
Sbjct: 123 LDSLKRTGGLALVTTSDVSA-RLIPYGGGYVSTKWAARALVRTFQIE--NPDVRFFELRP 179
Query: 181 WVIKT 185
             + T
Sbjct: 180 GAVDT 184

>pdb|1W0C|A Chain A, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1) By 2,4,6-Triaminoquinazoline; Structure Of The Nadp Ternary Complex. Length = 307

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 108/281 (38%), Gaps = 50/281 (17%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIV----HTCSRNQIELDARLHEWK-NKGFKVTGSVCD 57
           ALVTG  + +G +  E L   G  V    H  +     L A L+  + N    V   + +
Sbjct: 28  ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN 87
Query: 58  LSSREQR-----------EKLIETVTSIFQ--GKLNILINNAAIAFVKPTVDITA----- 99
           +++                +  E V + +   G+ ++L+NNA+  +  P +         
Sbjct: 88  VATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEP 147
Query: 100 -----EDMSTVSSTNFES-----VFHLSQLAH-----PLFKASGNGSIVFISSVGGVRGI 144
                E M T ++  F S      F +   AH     P      N SI+ +      + +
Sbjct: 148 CVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL 207
Query: 145 PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW--VIKTSMIKPFEEGPEGSEFLD 202
              ++Y   KGA+  LT++ A E A   IR N V P   V+   M     EG        
Sbjct: 208 LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAVWEGHRS----- 262
Query: 203 GIARQTPI-GRAGEPDEVSSLVAFLCLPAASYITGQIICVD 242
               + P+  R     EVS +V FLC   A YITG  + VD
Sbjct: 263 ----KVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVD 299

>pdb|3IAH|A Chain A, Crystal Structure Of Short Chain Dehydrogenase (ycik) From Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. Lt2 In Complex With Nadp And Acetate. Length = 256

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 80/189 (42%), Gaps = 9/189 (4%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELD------ARLHEWKNKGFKVTGSVCD 57
           LVTG + GIG       AR+GA V    RN+ +L       A     + + F +    C 
Sbjct: 19  LVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIADEQHVQPQWFTLDLLTC- 77
Query: 58  LSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLS 117
             + E+  ++ + + + +     +L N   +  + P  +   +    V   N  + F L+
Sbjct: 78  --TAEECRQVADRIAAHYPRLDGVLHNAGLLGEIGPXSEQDPQIWQDVXQVNVNATFXLT 135
Query: 118 QLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
           Q   PL   S  GS+VF SS  G +G  +   Y   K A     + LA E+   ++R N 
Sbjct: 136 QALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYATSKFATEGXXQVLADEYQNRSLRVNC 195
Query: 178 VAPWVIKTS 186
           + P   +TS
Sbjct: 196 INPGGTRTS 204

>pdb|1E92|A Chain A, Pteridine Reductase 1 From Leishmania Major Complexed With Nadp+ And Dihydrobiopterin Length = 288

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 108/281 (38%), Gaps = 50/281 (17%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIV----HTCSRNQIELDARLHEWK-NKGFKVTGSVCD 57
           ALVTG  + +G +  E L   G  V    H  +     L A L+  + N    V   + +
Sbjct: 9   ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN 68
Query: 58  LSSREQR-----------EKLIETVTSIFQ--GKLNILINNAAIAFVKPTVDITA----- 99
           +++                +  E V + +   G+ ++L+NNA+  +  P +         
Sbjct: 69  VATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEP 128
Query: 100 -----EDMSTVSSTNFES-----VFHLSQLAH-----PLFKASGNGSIVFISSVGGVRGI 144
                E M T ++  F S      F +   AH     P      N SI+ +      + +
Sbjct: 129 CVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL 188
Query: 145 PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW--VIKTSMIKPFEEGPEGSEFLD 202
              ++Y   KGA+  LT++ A E A   IR N V P   V+   M     EG        
Sbjct: 189 LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAVWEGHRS----- 243
Query: 203 GIARQTPI-GRAGEPDEVSSLVAFLCLPAASYITGQIICVD 242
               + P+  R     EVS +V FLC   A YITG  + VD
Sbjct: 244 ----KVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVD 280

>pdb|1E7W|A Chain A, One Active Site, Two Modes Of Reduction Correlate The Mechanism Of Leishmania Pteridine Reductase With Pterin Metabolism And Antifolate Drug Resistance In Trpanosomes Length = 291

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 108/281 (38%), Gaps = 50/281 (17%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIV----HTCSRNQIELDARLHEWK-NKGFKVTGSVCD 57
           ALVTG  + +G +  E L   G  V    H  +     L A L+  + N    V   + +
Sbjct: 12  ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN 71
Query: 58  LSSREQR-----------EKLIETVTSIFQ--GKLNILINNAAIAFVKPTVDITA----- 99
           +++                +  E V + +   G+ ++L+NNA+  +  P +         
Sbjct: 72  VATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEP 131
Query: 100 -----EDMSTVSSTNFES-----VFHLSQLAH-----PLFKASGNGSIVFISSVGGVRGI 144
                E M T ++  F S      F +   AH     P      N SI+ +      + +
Sbjct: 132 CVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL 191
Query: 145 PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW--VIKTSMIKPFEEGPEGSEFLD 202
              ++Y   KGA+  LT++ A E A   IR N V P   V+   M     EG        
Sbjct: 192 LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAVWEGHRS----- 246
Query: 203 GIARQTPI-GRAGEPDEVSSLVAFLCLPAASYITGQIICVD 242
               + P+  R     EVS +V FLC   A YITG  + VD
Sbjct: 247 ----KVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVD 283

>pdb|2QHX|A Chain A, Structure Of Pteridine Reductase From Leishmania Major Complexed With A Ligand Length = 328

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 70/280 (25%), Positives = 106/280 (37%), Gaps = 48/280 (17%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIV----HTCSRNQIELDARLHEWK-NKGFKVTGSVCD 57
           ALVTG  + +G +  E L   G  V    H  +     L A L+  + N    V   + +
Sbjct: 49  ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN 108
Query: 58  LSSREQR-----------EKLIETVTSIFQ--GKLNILINNAAIAFVKPTVDITA----- 99
           +++                +  E V + +   G+ ++L+NNA+  +  P +         
Sbjct: 109 VATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEP 168
Query: 100 -----EDMSTVSSTNFES-----VFHLSQLAH-----PLFKASGNGSIVFISSVGGVRGI 144
                E M T ++  F S      F +   AH     P      N SI+ +      + +
Sbjct: 169 CVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL 228
Query: 145 PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW--VIKTSMIKPFEEGPEGSEFLD 202
              ++Y   KGA+  LT++ A E A   IR N V P   V+   M     EG      L 
Sbjct: 229 LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAVWEGHRSKVPL- 287
Query: 203 GIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 242
                    R     EVS +V FLC   A YITG  + VD
Sbjct: 288 -------YQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVD 320

>pdb|4ALL|A Chain A, Crystal Structure Of S. Aureus Fabi In Complex With Nadp And Triclosan (P212121) Length = 277

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 6/133 (4%)
Query: 112 SVFHLSQLAHPLFK-ASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAK 170
           S + L+ +AH   K     GSIV  + +GG   + + ++ G  K ++    K LA +   
Sbjct: 142 SSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALDLGP 201
Query: 171 DNIRTNTVAPWVIKTSMIKPFEEGPEG-SEFLDGIARQTPIGRAGEPDEVSSLVAFLCLP 229
           DNIR N ++   I+T   K    G  G +  L  I  + P+ R  +  EV    A+L   
Sbjct: 202 DNIRVNAISAGPIRTLSAK----GVGGFNTILKEIEERAPLKRNVDQVEVGKTAAYLLSD 257
Query: 230 AASYITGQIICVD 242
            +S +TG+ I VD
Sbjct: 258 LSSGVTGENIHVD 270

>pdb|4FS3|A Chain A, Crystal Structure Of Staphylococcus Aureus Enoyl-Acp Reductase In Complex With Nadp And Afn-1252 Length = 256

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 6/133 (4%)
Query: 112 SVFHLSQLAHPLFK-ASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAK 170
           S + L+ +AH   K     GSIV  + +GG   + + ++ G  K ++    K LA +   
Sbjct: 121 SSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALDLGP 180
Query: 171 DNIRTNTVAPWVIKTSMIKPFEEGPEG-SEFLDGIARQTPIGRAGEPDEVSSLVAFLCLP 229
           DNIR N ++   I+T   K    G  G +  L  I  + P+ R  +  EV    A+L   
Sbjct: 181 DNIRVNAISAGPIRTLSAK----GVGGFNTILKEIKERAPLKRNVDQVEVGKTAAYLLSD 236
Query: 230 AASYITGQIICVD 242
            +S +TG+ I VD
Sbjct: 237 LSSGVTGENIHVD 249

>pdb|3GNT|A Chain A, Crystal Structure Of The Staphylococcus Aureus Enoyl-Acyl Carrier Protein Reductase (Fabi) In Apo Form (Two Molecules In Au) Length = 256

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 6/133 (4%)
Query: 112 SVFHLSQLAHPLFK-ASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAK 170
           S + L+ +AH   K     GSIV  + +GG   + + ++ G  K ++    K LA +   
Sbjct: 121 SSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALDLGP 180
Query: 171 DNIRTNTVAPWVIKTSMIKPFEEGPEG-SEFLDGIARQTPIGRAGEPDEVSSLVAFLCLP 229
           DNIR N ++   I+T   K    G  G +  L  I  + P+ R  +  EV    A+L   
Sbjct: 181 DNIRVNAISAGPIRTLSAK----GVGGFNTILKEIEERAPLKRNVDQVEVGKTAAYLLSD 236
Query: 230 AASYITGQIICVD 242
            +S +TG+ I VD
Sbjct: 237 LSSGVTGENIHVD 249

>pdb|1Y5M|A Chain A, The Crystal Structure Of Murine 11b-Hydroxysteroid Dehydrogenase: An Important Therapeutic Target For Diabetes Length = 276

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 15/162 (9%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG----FKVTGSVCDLS 59
           +VTG ++GIG      L++ GA V   +R++  L   +      G      + G++ D++
Sbjct: 22  IVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGAASAHYIAGTMEDMT 81
Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVS---STNFESVFHL 116
             EQ             G L++LI N      + ++ +  +D+ +V      NF S   +
Sbjct: 82  FAEQ----FIVKAGKLMGGLDMLILNH---ITQTSLSLFHDDIHSVRRVMEVNFLSYVVM 134
Query: 117 SQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158
           S  A P+ K S NGSI  ISS+ G    P ++ Y A K A++
Sbjct: 135 STAALPMLKQS-NGSIAVISSLAGKMTQPMIAPYSASKFALD 175

>pdb|3GNS|A Chain A, Crystal Structure Of The Staphylococcus Aureus Enoyl-Acyl Carrier Protein Reductase (Fabi) In Apo Form (One Molecule In Au) Length = 260

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 6/133 (4%)
Query: 112 SVFHLSQLAHPLFK-ASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAK 170
           S + L+ +AH   K     GSIV  + +GG   + + ++ G  K ++    K LA +   
Sbjct: 125 SSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALDLGP 184
Query: 171 DNIRTNTVAPWVIKTSMIKPFEEGPEG-SEFLDGIARQTPIGRAGEPDEVSSLVAFLCLP 229
           DNIR N ++   I+T   K    G  G +  L  I  + P+ R  +  EV    A+L   
Sbjct: 185 DNIRVNAISAGPIRTLSAK----GVGGFNTILKEIEERAPLKRNVDQVEVGKTAAYLLSD 240
Query: 230 AASYITGQIICVD 242
            +S +TG+ I VD
Sbjct: 241 LSSGVTGENIHVD 253

>pdb|4ALI|A Chain A, Crystal Structure Of S. Aureus Fabi In Complex With Nadp And Triclosan (P1) Length = 282

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 6/133 (4%)
Query: 112 SVFHLSQLAHPLFK-ASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAK 170
           S + L+ +AH   K     GSIV  + +GG   + + ++ G  K ++    K LA +   
Sbjct: 147 SSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALDLGP 206
Query: 171 DNIRTNTVAPWVIKTSMIKPFEEGPEG-SEFLDGIARQTPIGRAGEPDEVSSLVAFLCLP 229
           DNIR N ++   I+T   K    G  G +  L  I  + P+ R  +  EV    A+L   
Sbjct: 207 DNIRVNAISAGPIRTLSAK----GVGGFNTILKEIEERAPLKRNVDQVEVGKTAAYLLSD 262
Query: 230 AASYITGQIICVD 242
            +S +TG+ I VD
Sbjct: 263 LSSGVTGENIHVD 275

>pdb|3GRK|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Reductase Sdr Glucose-Ribitol Dehydrogenase From Brucella Melitensis Length = 293

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 89/196 (45%), Gaps = 20/196 (10%)
Query: 56  CDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFE---- 111
           CD++     + + ET+   + GKL+ L++  AI F     ++T   + T S  NF     
Sbjct: 88  CDVADAASIDAVFETLEKKW-GKLDFLVH--AIGFSDKD-ELTGRYIDT-SEANFTNTML 142
Query: 112 -SVFHLSQLAHPLFKASGNG-SIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA 169
            SV+ L+ ++    K   +G SI+ ++  G  + +P+ ++ G  K A+    K LA +  
Sbjct: 143 ISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMPNYNVMGVAKAALEASVKYLAVDLG 202
Query: 170 KDNIRTNTVAPWVIKT---SMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFL 226
             NIR N ++   IKT   S I  F    + +E+        P+ R    DEV  +  + 
Sbjct: 203 PQNIRVNAISAGPIKTLAASGIGDFRYILKWNEY------NAPLRRTVTIDEVGDVGLYF 256
Query: 227 CLPAASYITGQIICVD 242
               +  +TG++   D
Sbjct: 257 LSDLSRSVTGEVHHAD 272

>pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg) From Bacteroides Thetaiotaomicron Length = 250

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 91/211 (43%), Gaps = 11/211 (5%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVC---DLS 59
           A++TG ++GIG      LA  G  V   +R++  L+    E       V   +    D++
Sbjct: 10  AIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIXRSNKHVQEPIVLPLDIT 69
Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
              + +  I+ +   + G ++IL+ NAA  F   ++    ++   +   N  + + + + 
Sbjct: 70  DCTKADTEIKDIHQKY-GAVDILV-NAAAXFXDGSLSEPVDNFRKIXEINVIAQYGILKT 127
Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
              + K   NG I  ++S     G     +YG+ K A+  L ++L  E A   IR  T+ 
Sbjct: 128 VTEIXKVQKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLC 187
Query: 180 PWVIKTSMIK----PF--EEGPEGSEFLDGI 204
           P  + T   K    PF  EE  +  + L+ I
Sbjct: 188 PGWVNTDXAKKAGTPFKDEEXIQPDDLLNTI 218

>pdb|2QIO|A Chain A, X-Ray Structure Of Enoyl-Acyl Carrier Protein Reductase From Bacillus Anthracis With Triclosan Length = 256

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 61/132 (46%), Gaps = 4/132 (3%)
Query: 112 SVFHLSQLAHPLFKA-SGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAK 170
           S F L+ +A    K  +  G+I+ ++ +GG R + + ++ G  K ++    K LA +  +
Sbjct: 121 SAFSLTAVAREAKKVMTEGGNILTLTYLGGERVVKNYNVMGVAKASLEASVKYLANDLGQ 180
Query: 171 DNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPA 230
             IR N ++   I+T   K      + +  L  I  + P+ R    +EV     FL    
Sbjct: 181 HGIRVNAISAGPIRTLSAKGV---GDFNSILREIEERAPLRRTTTQEEVGDTAVFLFSDL 237
Query: 231 ASYITGQIICVD 242
           A  +TG+ I VD
Sbjct: 238 ARGVTGENIHVD 249

>pdb|3OJF|A Chain A, Crystal Structure Of The Bacillus Cereus Enoyl-Acyl Carrier Protein Reductase With Nadp+ And Indole Naphthyridinone (Complex Form) Length = 257

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 61/132 (46%), Gaps = 4/132 (3%)
Query: 112 SVFHLSQLAHPLFKA-SGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAK 170
           S F L+ +A    K  +  G+I+ ++ +GG R + + ++ G  K ++    K LA +  +
Sbjct: 121 SAFSLTAVAREAKKVMTEGGNILTLTYLGGERVVKNYNVMGVAKASLEASVKYLANDLGQ 180
Query: 171 DNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPA 230
             IR N ++   I+T   K      + +  L  I  + P+ R    +EV     FL    
Sbjct: 181 HGIRVNAISAGPIRTLSAKGV---GDFNSILREIEERAPLRRTTTQEEVGDTAVFLFSDL 237
Query: 231 ASYITGQIICVD 242
           A  +TG+ I VD
Sbjct: 238 ARGVTGENIHVD 249

>pdb|3E9N|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM Length = 245

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 102/229 (44%), Gaps = 28/229 (12%)
Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
           A+VTG T G+G   V++L+R   IV+   RN   L A L E +     V     D+    
Sbjct: 8   AVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHL-AALAEIEG----VEPIESDIVKEV 61
Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVS-----STNFESVFHLS 117
             E  ++ + ++    ++ L++ AA+A      D T E  S          N      LS
Sbjct: 62  LEEGGVDKLKNLDH--VDTLVHAAAVAR-----DTTIEAGSVAEWHAHLDLNVIVPAELS 114
Query: 118 QLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
           +   P  +A+ +G +++I+S  G    P  ++Y A K A+  L      E A + IR +T
Sbjct: 115 RQLLPALRAA-SGCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFRKEEANNGIRVST 173
Query: 178 VAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFL 226
           V+P    T M++   +  +G+ F   I          EP E+++ + F+
Sbjct: 174 VSPGPTNTPMLQGLMDS-QGTNFRPEIYI--------EPKEIANAIRFV 213

>pdb|1UAY|A Chain A, Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa Dehydrogenase From Thermus Thermophilus Hb8 Length = 242

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 65/150 (43%), Gaps = 14/150 (9%)
Query: 100 EDMSTVSSTNFESVFHLSQLA------HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAY 153
           E    V   N    F++ +LA      +P       G IV  +SV    G    + Y A 
Sbjct: 92  ESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAAS 151
Query: 154 KGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPI-GR 212
           KG +  LT   A E A   IR  TVAP +  T +++   E  + S     +A Q P   R
Sbjct: 152 KGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKAS-----LAAQVPFPPR 206
Query: 213 AGEPDEVSSLVAFLCLPAASYITGQIICVD 242
            G P+E ++LV  L +     + G+++ +D
Sbjct: 207 LGRPEEYAALV--LHILENPMLNGEVVRLD 234

>pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Hydroxysteroid Dehydrogenase Like 2 (Hsdl2) Length = 346

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 8/142 (5%)
Query: 2   TALVTGGTRGIGHATVEELARFGA---IVHTCSRNQIELDARLH----EWKNKGFKVTGS 54
           T  +TG +RGIG A   + A+ GA   I    ++   +L   ++    E +  G K    
Sbjct: 47  TVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPC 106
Query: 55  VCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVF 114
           + D+   +Q    +E     F G ++IL+NNA+   +  T+D   + +  + + N    +
Sbjct: 107 IVDVRDEQQISAAVEKAIKKFGG-IDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTY 165
Query: 115 HLSQLAHPLFKASGNGSIVFIS 136
             S+   P  K S    I+ IS
Sbjct: 166 LASKACIPYLKKSKVAHILNIS 187

>pdb|1QSG|A Chain A, Crystal Structure Of Enoyl Reductase Inhibition By Triclosan Length = 265

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 57/115 (49%), Gaps = 9/115 (7%)
Query: 131 SIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKT---SM 187
           +++ +S +G  R IP+ ++ G  K ++    + +A     + +R N ++   I+T   S 
Sbjct: 143 ALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASG 202
Query: 188 IKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 242
           IK F +       L      TPI R    ++V +  AFLC   ++ I+G+++ VD
Sbjct: 203 IKDFRK------MLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVD 251

>pdb|1C14|A Chain A, Crystal Structure Of E Coli Enoyl Reductase-nad+-triclosan Complex Length = 262

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 57/115 (49%), Gaps = 9/115 (7%)
Query: 131 SIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKT---SM 187
           +++ +S +G  R IP+ ++ G  K ++    + +A     + +R N ++   I+T   S 
Sbjct: 140 ALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASG 199
Query: 188 IKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 242
           IK F +       L      TPI R    ++V +  AFLC   ++ I+G+++ VD
Sbjct: 200 IKDFRK------MLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVD 248

>pdb|1DFG|A Chain A, X-Ray Structure Of Escherichia Coli Enoyl Reductase With Bound Nad And Benzo-Diazaborine Length = 261

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 57/115 (49%), Gaps = 9/115 (7%)
Query: 131 SIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKT---SM 187
           +++ +S +G  R IP+ ++ G  K ++    + +A     + +R N ++   I+T   S 
Sbjct: 139 ALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASG 198
Query: 188 IKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 242
           IK F +       L      TPI R    ++V +  AFLC   ++ I+G+++ VD
Sbjct: 199 IKDFRK------MLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVD 247

>pdb|1D7O|A Chain A, Crystal Structure Of Brassica Napus Enoyl Acyl Carrier Protein Reductase Complexed With Nad And Triclosan Length = 297

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 86/184 (46%), Gaps = 37/184 (20%)
Query: 77  GKLNILINNAAIA--FVKPTVDITAED-MSTVSSTNFESVFHLSQLAHPLFKASGNGSIV 133
           G ++IL+++ A      KP ++ + +  ++ +S++++  V   S L+H L   +  G+ +
Sbjct: 118 GSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFV---SLLSHFLPIMNPGGASI 174
Query: 134 FISSVGGVRGIPSVSLYG----AYKGAMNQLTKNLACEWA-KDNIRTNTVAPWVIKTSMI 188
            ++ +   R IP    YG    + K A+   T+ LA E   K NIR NT++         
Sbjct: 175 SLTYIASERIIPG---YGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTIS--------- 222
Query: 189 KPFEEGPEGSE------FLDGIARQT----PIGRAGEPDEVSSLVAFLCLPAASYITGQI 238
                GP GS       F+D +   +    PI +    DEV +  AFL  P AS ITG  
Sbjct: 223 ----AGPLGSRAAKAIGFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGAT 278
Query: 239 ICVD 242
           I VD
Sbjct: 279 IYVD 282

>pdb|3PJD|A Chain A, Structure Of Enr G93a Mutant-Nad+-Triclosan Complex Length = 270

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 58/115 (50%), Gaps = 9/115 (7%)
Query: 131 SIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKT---SM 187
           +++ +S +G  R IP+ ++ G  K ++    + +A     + +R N ++   I+T   S 
Sbjct: 140 ALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASG 199
Query: 188 IKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 242
           IK F +     E +      TPI R    ++V +  AFLC   ++ I+G+++ VD
Sbjct: 200 IKDFRKMLAHCEAV------TPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVD 248

>pdb|3PJE|A Chain A, Structure Of Enr G93s Mutant-Nad+-Triclosan Complex Length = 270

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 58/115 (50%), Gaps = 9/115 (7%)
Query: 131 SIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKT---SM 187
           +++ +S +G  R IP+ ++ G  K ++    + +A     + +R N ++   I+T   S 
Sbjct: 140 ALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASG 199
Query: 188 IKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 242
           IK F +     E +      TPI R    ++V +  AFLC   ++ I+G+++ VD
Sbjct: 200 IKDFRKMLAHCEAV------TPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVD 248

>pdb|3PJF|A Chain A, Structure Of Enr G93v Mutant-Nad+-Triclosan Complex Length = 270

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 58/115 (50%), Gaps = 9/115 (7%)
Query: 131 SIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKT---SM 187
           +++ +S +G  R IP+ ++ G  K ++    + +A     + +R N ++   I+T   S 
Sbjct: 140 ALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASG 199
Query: 188 IKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 242
           IK F +     E +      TPI R    ++V +  AFLC   ++ I+G+++ VD
Sbjct: 200 IKDFRKMLAHCEAV------TPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVD 248

>pdb|1ENO|A Chain A, Brassica Napus Enoyl Acp ReductaseNAD BINARY COMPLEX AT PH 8.0 AND Room Temperature Length = 312

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 86/184 (46%), Gaps = 37/184 (20%)
Query: 77  GKLNILINNAAIA--FVKPTVDITAED-MSTVSSTNFESVFHLSQLAHPLFKASGNGSIV 133
           G ++IL+++ A      KP ++ + +  ++ +S++++  V   S L+H L   +  G+ +
Sbjct: 128 GSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFV---SLLSHFLPIMNPGGASI 184
Query: 134 FISSVGGVRGIPSVSLYG----AYKGAMNQLTKNLACEWA-KDNIRTNTVAPWVIKTSMI 188
            ++ +   R IP    YG    + K A+   T+ LA E   K NIR NT++         
Sbjct: 185 SLTYIASERIIPG---YGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTIS--------- 232
Query: 189 KPFEEGPEGSE------FLDGIARQT----PIGRAGEPDEVSSLVAFLCLPAASYITGQI 238
                GP GS       F+D +   +    PI +    DEV +  AFL  P AS ITG  
Sbjct: 233 ----AGPLGSRAAKAIGFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGAT 288
Query: 239 ICVD 242
           I VD
Sbjct: 289 IYVD 292

>pdb|1NAS|A Chain A, Sepiapterin Reductase Complexed With N-acetyl Serotonin Length = 259

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 94/210 (44%), Gaps = 15/210 (7%)
Query: 4   LVTGGTRGIGHATVEELARF---GAIVHTCSRNQIELDARLHEW--KNKGFKVTGSVCDL 58
           ++TG +RG G A   +LAR    G+++   +R++  L     E   +    KV  +  DL
Sbjct: 10  VLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADL 69
Query: 59  SSREQREKLIETVTSIFQG---KLNILINNAAIAFVKPTVDITAEDMSTVS---STNFES 112
            +    ++L+  V  + +    +  +LINNAA         +   D++ V+   + N  S
Sbjct: 70  GTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTS 129
Query: 113 VFHLSQLAHPLFKASG--NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAK 170
           +  L+      F+ S   + ++V ISS+  ++      LY A K A + L + LA E  +
Sbjct: 130 MLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQVLAAE--E 187
Query: 171 DNIRTNTVAPWVIKTSMIKPFEEGPEGSEF 200
            ++R  + AP  +   M +   E  +  E 
Sbjct: 188 PSVRVLSYAPGPLDNDMQQLARETSKDPEL 217

>pdb|1SEP|A Chain A, Mouse Sepiapterin Reductase Complexed With Nadp And Sepiapterin Length = 261

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 94/210 (44%), Gaps = 15/210 (7%)
Query: 4   LVTGGTRGIGHATVEELARF---GAIVHTCSRNQIELDARLHEW--KNKGFKVTGSVCDL 58
           ++TG +RG G A   +LAR    G+++   +R++  L     E   +    KV  +  DL
Sbjct: 12  VLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADL 71
Query: 59  SSREQREKLIETVTSIFQG---KLNILINNAAIAFVKPTVDITAEDMSTVS---STNFES 112
            +    ++L+  V  + +    +  +LINNAA         +   D++ V+   + N  S
Sbjct: 72  GTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTS 131
Query: 113 VFHLSQLAHPLFKASG--NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAK 170
           +  L+      F+ S   + ++V ISS+  ++      LY A K A + L + LA E  +
Sbjct: 132 MLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQVLAAE--E 189
Query: 171 DNIRTNTVAPWVIKTSMIKPFEEGPEGSEF 200
            ++R  + AP  +   M +   E  +  E 
Sbjct: 190 PSVRVLSYAPGPLDNDMQQLARETSKDPEL 219

>pdb|3U9L|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase (Nadph) From Sinorhizobium Meliloti Length = 324

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 84/193 (43%), Gaps = 17/193 (8%)
Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSV------CD 57
           L+TG + G G  T E LA  G  V+   R+ +  +A   E    GF     V       D
Sbjct: 9   LITGASSGFGRLTAEALAGAGHRVYASXRDIVGRNASNVE-AIAGFARDNDVDLRTLELD 67
Query: 58  LSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLS 117
           + S+   ++ I+ +     G++++LI+NA      P    T E  + +   N  S   ++
Sbjct: 68  VQSQVSVDRAIDQIIGE-DGRIDVLIHNAGHXVFGPAEAFTPEQFAELYDINVLSTQRVN 126
Query: 118 QLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
           + A P  +   +G +++ISS     G P    Y A   A       +A ++A++  R   
Sbjct: 127 RAALPHXRRQKHGLLIWISSSSSAGGTPP---YLAPYFAAKAAXDAIAVQYARELSR--- 180
Query: 178 VAPWVIKTSMIKP 190
              W I+TS+I P
Sbjct: 181 ---WGIETSIIVP 190

>pdb|1CWU|A Chain A, Brassica Napus Enoyl Acp Reductase A138g Mutant Complexed With Nad+ And Thienodiazaborine Length = 296

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 71/156 (45%), Gaps = 34/156 (21%)
Query: 102 MSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYG----AYKGAM 157
           ++ +S++++  V   S L+H L   +  G+ + ++ +   R IP    YG    + K A+
Sbjct: 145 LAAISASSYSFV---SLLSHFLPIMNPGGASISLTYIASERIIPG---YGGGMSSAKAAL 198
Query: 158 NQLTKNLACEWA-KDNIRTNTVAPWVIKTSMIKPFEEGPEGSE------FLDGIARQT-- 208
              T+ LA E   K NIR NT++              GP GS       F+D +   +  
Sbjct: 199 ESDTRVLAFEAGRKQNIRVNTIS-------------AGPLGSRAAKAIGFIDTMIEYSYN 245
Query: 209 --PIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 242
             PI +    DEV +  AFL  P AS ITG  I VD
Sbjct: 246 NAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVD 281

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	259
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	1e-134
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	1e-133
1xq1_A	266	Putative tropinone reducatse; structural genomics,	1e-130
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	1e-87
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	1e-83
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	5e-82
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	1e-81
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	3e-80
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	8e-80
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	1e-79
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	3e-79
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	5e-79
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	8e-79
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	9e-79
3imf_A	257	Short chain dehydrogenase; structural genomics, in	4e-78
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	5e-78
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	6e-78
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	6e-78
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	7e-78
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	2e-77
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	1e-76
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	3e-76
3cxt_A	291	Dehydrogenase with different specificities; rossma	4e-76
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	8e-76
4dqx_A	277	Probable oxidoreductase protein; structural genomi	1e-75
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	5e-75
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	7e-75
4e4y_A	244	Short chain dehydrogenase family protein; structur	7e-75
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	7e-75
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	9e-75
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	1e-74
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	1e-74
1xhl_A	297	Short-chain dehydrogenase/reductase family member	2e-74
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	4e-74
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	5e-74
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	6e-74
1spx_A	278	Short-chain reductase family member (5L265); paral	6e-74
1xkq_A	280	Short-chain reductase family member (5D234); parra	1e-73
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	1e-73
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	2e-73
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	4e-73
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	7e-73
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	7e-73
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	8e-73
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	9e-73
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	9e-73
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	1e-72
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	1e-72
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	2e-72
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	2e-72
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	4e-72
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	8e-72
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	9e-72
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	3e-71
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	3e-71
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	3e-71
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	4e-71
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	9e-71
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	4e-70
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	4e-70
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	5e-70
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	2e-69
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	3e-69
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	5e-69
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	8e-69
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	1e-68
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	2e-68
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	2e-68
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	3e-68
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	3e-68
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	5e-68
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	6e-68
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	7e-67
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	9e-67
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	1e-65
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	2e-65
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	2e-65
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	3e-65
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	6e-65
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	7e-65
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	1e-64
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-64
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	2e-64
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	3e-64
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	3e-64
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	5e-64
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-63
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	2e-63
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	2e-63
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	6e-63
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	2e-62
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	2e-62
3rih_A	293	Short chain dehydrogenase or reductase; structural	6e-62
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	7e-62
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	1e-61
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	2e-61
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	3e-61
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	3e-61
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	3e-61
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	1e-60
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	1e-60
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	1e-60
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	3e-60
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	4e-60
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	4e-60
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	4e-60
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	5e-60
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	5e-60
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	2e-59
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	2e-59
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	2e-59
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	4e-59
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	7e-59
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	1e-58
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	2e-58
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	2e-58
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	2e-58
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	2e-58
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	3e-58
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	3e-58
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-58
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	3e-58
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	4e-58
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	5e-58
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	5e-58
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	7e-58
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	1e-57
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	1e-57
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	2e-57
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	3e-57
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	5e-57
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	8e-57
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	9e-57
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	1e-56
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	1e-56
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	2e-56
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	2e-56
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	6e-56
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	1e-55
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	9e-55
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	4e-54
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	5e-54
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	7e-54
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	3e-53
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	4e-53
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	1e-52
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	2e-51
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	1e-50
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	3e-50
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	1e-49
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	4e-49
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	1e-48
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	6e-48
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	3e-45
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	3e-44
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	4e-44
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	9e-44
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	2e-43
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	6e-43
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	6e-43
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	6e-43
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	5e-42
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	2e-41
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	1e-40
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	8e-39
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	1e-38
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	1e-37
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	3e-33
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	2e-37
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	3e-37
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	9e-36
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	2e-34
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	6e-34
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	2e-32
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	2e-32
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	7e-32
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	1e-31
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	1e-31
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	2e-31
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	1e-30
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	6e-30
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	4e-29
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	4e-28
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	9e-28
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	1e-27
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	1e-22
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	2e-21
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	2e-21
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	4e-21
4alk_A	282	ENR, enoyl-[acyl-carrier-protein] reductase [NADPH	7e-21
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	9e-21
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	1e-20
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	1e-20
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	3e-20
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	6e-20
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	8e-20
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	6e-18
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	6e-18
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	5e-17
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	2e-16
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	2e-12
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	5e-12
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	2e-09
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	2e-09
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	1e-06
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	4e-06
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	4e-06
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	7e-06
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	9e-06
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	4e-04

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =  378 bits (973), Expect = e-134
 Identities = 144/248 (58%), Positives = 185/248 (74%), Gaps = 1/248 (0%)

Query: 1   MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
            TALVTGG++GIG+A VEELA  GA V+TCSRN+ ELD  L  W+ KG  V GSVCDL S
Sbjct: 22  TTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLS 81

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
           R +R+KL++TV  +F GKLNIL+NNA +   K   D T +D + +  TNFE+ +HLSQ+A
Sbjct: 82  RTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIA 141

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
           +PL KAS NG+++F+SS+ G   +PSVSLY A KGA+NQ+TK+LACEWAKDNIR N+VAP
Sbjct: 142 YPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAP 201

Query: 181 WVIKTSMIKPF-EEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
            VI T +++   ++ P   E +D    +TP+GRAG+P EVS+L+AFLC PAASYITGQII
Sbjct: 202 GVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASYITGQII 261

Query: 240 CVDGGVTV 247
             DGG T 
Sbjct: 262 WADGGFTA 269

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score =  376 bits (968), Expect = e-133
 Identities = 141/247 (57%), Positives = 178/247 (72%)

Query: 1   MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
            TALVTGG+RGIG+  VEELA  GA V+TCSRNQ EL+  L +W++KGFKV  SVCDLSS
Sbjct: 10  CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSS 69

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
           R +R++L+ TV + F GKLNIL+NNA I   K   D T ED S + S NFE+ +HLS LA
Sbjct: 70  RSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLA 129

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
           HP  KAS  G++VFISSV G   +P  ++YGA KGAM+QLT+ LA EWAKDNIR N V P
Sbjct: 130 HPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGP 189

Query: 181 WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
            VI TS+++   + PE  E L+ +  +  + R GEP E++++VAFLC PAASY+TGQII 
Sbjct: 190 GVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYVTGQIIY 249

Query: 241 VDGGVTV 247
           VDGG+  
Sbjct: 250 VDGGLMA 256

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score =  368 bits (947), Expect = e-130
 Identities = 151/247 (61%), Positives = 184/247 (74%), Gaps = 4/247 (1%)

Query: 1   MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
            T LVTGGT+GIGHA VEE A FGA++HTC+RN+ EL+  L +W+ KGF+VTGSVCD S 
Sbjct: 15  KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASL 74

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
           R +REKL++TV+S+F GKL+ILINN      KPT+D TAED S   STN ES +HLSQLA
Sbjct: 75  RPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLA 134

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
           HPL KASG G+I+F+SS+ GV      S+Y A KGA+NQL +NLACEWA D IR N VAP
Sbjct: 135 HPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANAVAP 194

Query: 181 WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
            VI T + +   +     EF   +  + P+GR GEP+EVSSLVAFLC+PAASYITGQ IC
Sbjct: 195 AVIATPLAEAVYD----DEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYITGQTIC 250

Query: 241 VDGGVTV 247
           VDGG+TV
Sbjct: 251 VDGGLTV 257

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score =  260 bits (666), Expect = 1e-87
 Identities = 85/246 (34%), Positives = 128/246 (52%), Gaps = 5/246 (2%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            ALVT  T GIG A    LA+ GA V   SR Q  +D  +   + +G  VTG+VC +   
Sbjct: 16  VALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKA 75

Query: 62  EQREKLIETVTSIFQGKLNILINNAAI-AFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
           E RE+L+    ++  G ++IL++NAA+  F    +D T E    +   N ++   +++  
Sbjct: 76  EDRERLVAMAVNLH-GGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAV 134

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
            P  +  G GS++ +SSVG     P++  Y   K A+  LTKNLA E A  NIR N +AP
Sbjct: 135 VPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAP 194

Query: 181 WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
            +IKT+  +            + +     I R G P++ + +V+FLC   ASYITG+ + 
Sbjct: 195 GLIKTNFSQVLWMDK---ARKEYMKESLRIRRLGNPEDCAGIVSFLCSEDASYITGETVV 251

Query: 241 VDGGVT 246
           V GG  
Sbjct: 252 VGGGTA 257

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score =  250 bits (641), Expect = 1e-83
 Identities = 69/250 (27%), Positives = 113/250 (45%), Gaps = 8/250 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDA---RLHEWKNKGFKVTGSVCDL 58
           T LVTGG  GIG      L   GA V    RN  +L      L      G  +     D+
Sbjct: 13  TYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDI 72

Query: 59  SSREQREKLIETVTSIFQGKLNILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLS 117
           ++ ++  + ++ VT+   G+L+ +++ A  +  + P   + +E        N     ++ 
Sbjct: 73  TNEDETARAVDAVTAWH-GRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVL 131

Query: 118 QLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
           + A       G GS V ISS+           YG  K A++ L +  A E     +R N+
Sbjct: 132 KHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADELGASWVRVNS 191

Query: 178 VAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ 237
           + P +I+T ++    E     E     A  TP+ R GE ++V+++  FL   AAS++TGQ
Sbjct: 192 IRPGLIRTDLVAAITESA---ELSSDYAMCTPLPRQGEVEDVANMAMFLLSDAASFVTGQ 248

Query: 238 IICVDGGVTV 247
           +I VDGG  +
Sbjct: 249 VINVDGGQML 258

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score =  245 bits (627), Expect = 5e-82
 Identities = 76/248 (30%), Positives = 117/248 (47%), Gaps = 13/248 (5%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            ALVTG  +GIG  TV+ L   GA V   +R      + L     +   +     DL   
Sbjct: 9   RALVTGAGKGIGRDTVKALHASGAKVVAVTRTN----SDLVSLAKECPGIEPVCVDLGDW 64

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           +  EK +  +     G +++L+NNAA+  ++P +++T E      S N  SVF +SQ+  
Sbjct: 65  DATEKALGGI-----GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVA 119

Query: 122 PLFKASGN-GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
                 G  GSIV +SS+      P++  Y + KGAM  LTK +A E     IR N+V P
Sbjct: 120 RDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNP 179

Query: 181 WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
            V+ T M K     P   EF   +  + P+ +  E ++V + + FL    ++  +G  I 
Sbjct: 180 TVVLTDMGKKVSADP---EFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTSGGGIL 236

Query: 241 VDGGVTVT 248
           VD G   +
Sbjct: 237 VDAGYLAS 244

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score =  244 bits (625), Expect = 1e-81
 Identities = 77/246 (31%), Positives = 120/246 (48%), Gaps = 13/246 (5%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             LVTG  +GIG  TV+ L   GA V   SR Q +LD+ + E       +     DL   
Sbjct: 9   RVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRE----CPGIEPVCVDLGDW 64

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           E  E+ + +V     G +++L+NNAA+A ++P +++T E        N  +V  +SQ+  
Sbjct: 65  EATERALGSV-----GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVA 119

Query: 122 PLFKASGN-GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
               A G  G+IV +SS    R + + S+Y + KGA++ LTK +A E     IR N V P
Sbjct: 120 RGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNP 179

Query: 181 WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
            V+ TSM +     P        +  + P+G+  E + V + + FL    +   TG  + 
Sbjct: 180 TVVMTSMGQATWSDP---HKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGSTLP 236

Query: 241 VDGGVT 246
           V+GG  
Sbjct: 237 VEGGFW 242

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score =  241 bits (618), Expect = 3e-80
 Identities = 75/248 (30%), Positives = 108/248 (43%), Gaps = 6/248 (2%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE-WKNKGFKVTGSVCDLSS 60
            AL+TG T+GIG       A  GA +    R+  ELDA      +  G  V     DL+ 
Sbjct: 22  RALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAE 81

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
            +   +L       F G L++L+NNA I+  +P VD   +      + N  +   L+   
Sbjct: 82  PDAPAELARRAAEAF-GGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAV 140

Query: 121 HPLFKASGN-GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
                A+G  G+I+ ++S   +  +P    Y   K  +   TK LA E     IR N+V 
Sbjct: 141 GKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLARELGPHGIRANSVC 200

Query: 180 PWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
           P V+ T M +              +  + P+GR   P EVS  V +L   AAS I G  I
Sbjct: 201 PTVVLTEMGQRVWGDE---AKSAPMIARIPLGRFAVPHEVSDAVVWLASDAASMINGVDI 257

Query: 240 CVDGGVTV 247
            VDGG T+
Sbjct: 258 PVDGGYTM 265

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score =  240 bits (614), Expect = 8e-80
 Identities = 79/249 (31%), Positives = 122/249 (48%), Gaps = 6/249 (2%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            A++TG   GIG       A  GA V     N    +  + E +  G +     CD++S 
Sbjct: 13  CAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSE 72

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           ++   L +   S   GK++IL+NNA     KP  D+   D       N  S FHLSQL  
Sbjct: 73  QELSALADFAISKL-GKVDILVNNAGGGGPKP-FDMPMADFRRAYELNVFSFFHLSQLVA 130

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P  + +G G I+ I+S+       +++ Y + K A + L +N+A +  + NIR N +AP 
Sbjct: 131 PEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPG 190

Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
            I T  +K         E    + + TPI R G+P ++++   FLC PAAS+++GQI+ V
Sbjct: 191 AILTDALKSVIT----PEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQILTV 246

Query: 242 DGGVTVTVN 250
            GG    +N
Sbjct: 247 SGGGVQELN 255

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score =  240 bits (616), Expect = 1e-79
 Identities = 69/249 (27%), Positives = 111/249 (44%), Gaps = 5/249 (2%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSS 60
            A +TGG  G+G      L+  GA     SR    L A   +  ++ G KV    CD+  
Sbjct: 28  VAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRD 87

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQ-L 119
            +  +  +  +  +  G  NI+INNAA  F+ PT  ++     T++         ++  +
Sbjct: 88  PDMVQNTVSELIKVA-GHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEI 146

Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
              L KA    + + I+++    G   V    + K  +  ++K+LA EW K  +R N + 
Sbjct: 147 GKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQ 206

Query: 180 PWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
           P  IKT       +      F   +  + P GR G  +E+++L AFLC   AS+I G +I
Sbjct: 207 PGPIKTKGAFSRLDPTG--TFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWINGAVI 264

Query: 240 CVDGGVTVT 248
             DGG  V 
Sbjct: 265 KFDGGEEVL 273

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score =  238 bits (610), Expect = 3e-79
 Identities = 81/249 (32%), Positives = 121/249 (48%), Gaps = 7/249 (2%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            A+VTGG + IG A V  LA  GA V     ++      + + + +G  V+  V D+++ 
Sbjct: 15  VAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNT 74

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVK-PTVDITAEDMSTVSSTNFESVFHLSQLA 120
           E  +  + +V     G+++IL+  A I   +    D+T          N   +F   Q  
Sbjct: 75  ESVQNAVRSVHEQE-GRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAV 133

Query: 121 HPLFKASGNGSIVFISSVGGVRG--IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
             +      G IV I S+ G+        + Y A K  ++Q  ++LA EWA   IR N V
Sbjct: 134 GRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAV 193

Query: 179 APWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI 238
           AP  I+T++ +   E PE     D     TP+GR G+PDEV+S+V FL   AAS +TG I
Sbjct: 194 APTYIETTLTRFGMEKPE---LYDAWIAGTPMGRVGQPDEVASVVQFLASDAASLMTGAI 250

Query: 239 ICVDGGVTV 247
           + VD G TV
Sbjct: 251 VNVDAGFTV 259

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  238 bits (609), Expect = 5e-79
 Identities = 71/254 (27%), Positives = 114/254 (44%), Gaps = 10/254 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE--WKNKGFKVTGSVCDLS 59
            A+VTGG+ GIG ATVE L   GA V  C+R+   L A       +  G ++  SVCD+ 
Sbjct: 10  VAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVL 69

Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
              Q     E       G  +IL+NNA    V    + T E  S      F SV H  + 
Sbjct: 70  DALQVRAFAEACERTL-GCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRA 128

Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
             P  ++  + +IV ++S+   +  P +    A +  +  L +++A E+A   +R N + 
Sbjct: 129 FLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGIL 188

Query: 180 PWVIKTSMIKPFEE-------GPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAAS 232
             ++++   +   E                   +Q P+GR G+P E +  + FL  P ++
Sbjct: 189 IGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAILFLASPLSA 248

Query: 233 YITGQIICVDGGVT 246
           Y TG  I V GG++
Sbjct: 249 YTTGSHIDVSGGLS 262

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  237 bits (608), Expect = 8e-79
 Identities = 72/256 (28%), Positives = 116/256 (45%), Gaps = 9/256 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSS 60
            A++TG + GIG A  E  A+ GA +   +R    L       K K G +V     D+++
Sbjct: 9   VAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVAT 68

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
            E  + ++E+V S F G  +IL+NNA     +  ++   E           +   L++  
Sbjct: 69  PEGVDAVVESVRSSF-GGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGL 127

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
            P  +A G G+I+  +S+  V+ +    +Y   K A+   +K LA E  KDNIR N + P
Sbjct: 128 VPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINP 187

Query: 181 WVIKTSMIKPF------EEGPEGSEFL-DGIARQTPIGRAGEPDEVSSLVAFLCLPAASY 233
            +I T            + G +   +L        PI R   P+E+++   FLC   A+Y
Sbjct: 188 GLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFVFLCSERATY 247

Query: 234 ITGQIICVDGGVTVTV 249
             G    VDGG+  T+
Sbjct: 248 SVGSAYFVDGGMLKTL 263

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score =  237 bits (607), Expect = 9e-79
 Identities = 85/249 (34%), Positives = 118/249 (47%), Gaps = 5/249 (2%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           TALVTG  RG+G A  E LA  GA V         L   +     KG+   G   D++  
Sbjct: 11  TALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDE 70

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
              E     + +     ++ILINNA I + KP V++  E+   V  TN  S F +S+ A 
Sbjct: 71  LAIEAAFSKLDAEG-IHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAA 129

Query: 122 PLFKASGN-GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
               A  + G I+ I S+      P+V+ Y A KG +  LT ++A EWA+ NI+TN + P
Sbjct: 130 KRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGP 189

Query: 181 WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
             I T M     E  +   +   +   TP  R G P+E+     FL   A+ YI GQII 
Sbjct: 190 GYILTDMNTALIEDKQFDSW---VKSSTPSQRWGRPEELIGTAIFLSSKASDYINGQIIY 246

Query: 241 VDGGVTVTV 249
           VDGG    +
Sbjct: 247 VDGGWLAVL 255

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score =  235 bits (603), Expect = 4e-78
 Identities = 70/249 (28%), Positives = 117/249 (46%), Gaps = 5/249 (2%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             ++TGG+ G+G       A+ GA V    R + +L+    E +    ++     D+ + 
Sbjct: 8   VVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNT 67

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           +  +K+IE +   F G+++ILINNAA  F+ P  D++    ++V +      F+ SQ   
Sbjct: 68  DDIQKMIEQIDEKF-GRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIG 126

Query: 122 PLFKASGN-GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA-KDNIRTNTVA 179
             +   G  G+I+ + +       P V    A K  +  +TK LA EW  K  IR N +A
Sbjct: 127 KYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIA 186

Query: 180 PWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
           P  I+ +         E  E      +  P+GR G P+E++ L  +LC   A+YI G  +
Sbjct: 187 PGPIERTGGADKLWISE--EMAKRTIQSVPLGRLGTPEEIAGLAYYLCSDEAAYINGTCM 244

Query: 240 CVDGGVTVT 248
            +DGG  + 
Sbjct: 245 TMDGGQHLH 253

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score =  236 bits (604), Expect = 5e-78
 Identities = 70/248 (28%), Positives = 112/248 (45%), Gaps = 4/248 (1%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSS 60
            A +TGG  GIG    E   R G      SR+   +     +     G +      D+ +
Sbjct: 29  VAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRA 88

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
                  ++     F G+++ILIN AA  F+ P   ++     TV   +    F++S++ 
Sbjct: 89  PPAVMAAVDQALKEF-GRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVL 147

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
           +  F     G IV I++  G RG       G+ K A++ +T++LA EW   NIR N++AP
Sbjct: 148 YEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAP 207

Query: 181 WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
             I  +       GP+    L      +P+ R G   E++  V +L  P ASY+TG ++ 
Sbjct: 208 GPISGTEGLRRLGGPQ--ASLSTKVTASPLQRLGNKTEIAHSVLYLASPLASYVTGAVLV 265

Query: 241 VDGGVTVT 248
            DGG  +T
Sbjct: 266 ADGGAWLT 273

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score =  236 bits (605), Expect = 6e-78
 Identities = 88/251 (35%), Positives = 126/251 (50%), Gaps = 8/251 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDA-----RLHEWKNKGFKVTGSVC 56
            A+VTGG  GIG A V+EL   G+ V   SR    L +     + +    K  +V    C
Sbjct: 20  VAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQC 79

Query: 57  DLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHL 116
           ++ + E+   L+++    F GK+N L+NN    F+ P   I+++    V  TN    F++
Sbjct: 80  NIRNEEEVNNLVKSTLDTF-GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYM 138

Query: 117 SQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTN 176
            +  +  +     GSIV I       G P     GA +  +  LTK+LA EWA   IR N
Sbjct: 139 CKAVYSSWMKEHGGSIVNIIVPT-KAGFPLAVHSGAARAGVYNLTKSLALEWACSGIRIN 197

Query: 177 TVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG 236
            VAP VI +        G  G  F +G  ++ P  R G P+EVSS+V FL  PAAS+ITG
Sbjct: 198 CVAPGVIYSQTAVE-NYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAASFITG 256

Query: 237 QIICVDGGVTV 247
           Q + VDGG ++
Sbjct: 257 QSVDVDGGRSL 267

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score =  235 bits (602), Expect = 6e-78
 Identities = 58/250 (23%), Positives = 104/250 (41%), Gaps = 9/250 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             +++G    +G       A  GA +   +R    L+    +  + G +      D++  
Sbjct: 13  VVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDD 72

Query: 62  EQREKLIETVTSIFQGKLNILINNAA-IAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
            Q   L++     + G+++++INNA  +  +KP  + T E M             L Q  
Sbjct: 73  AQVAHLVDETMKAY-GRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGF 131

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
            P  + S  G++V ++S+           Y   K A+  +++ LA E  +  IR N+V P
Sbjct: 132 TPALEESK-GAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLP 190

Query: 181 WVIKTSMIKPFEEGPEGS------EFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYI 234
             I    +K + E   G       +  +  A  + + R    DEV+S + F+    AS I
Sbjct: 191 GYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAILFMASDLASGI 250

Query: 235 TGQIICVDGG 244
           TGQ + V+ G
Sbjct: 251 TGQALDVNCG 260

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score =  235 bits (602), Expect = 7e-78
 Identities = 74/247 (29%), Positives = 115/247 (46%), Gaps = 6/247 (2%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           TA+VTG   GIG A     AR GA V    R    +     E  + G      V DL+  
Sbjct: 33  TAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTD-GVKEVADEIADGGGSAEAVVADLADL 91

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           E    + E + +    ++++L+NNA I    P  +++      V + N ++ + LS+   
Sbjct: 92  EGAANVAEELAAT--RRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFG 149

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
               A G+G IV I+S+   +G  +V+ Y A K A+  LT+ LA EWA   +  N +AP 
Sbjct: 150 TAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPG 209

Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
            + T+         E +     I  + P GR   P+++     FL   AASY+ GQ++ V
Sbjct: 210 YVVTANTAALRADDERAAE---ITARIPAGRWATPEDMVGPAVFLASDAASYVHGQVLAV 266

Query: 242 DGGVTVT 248
           DGG   +
Sbjct: 267 DGGWLAS 273

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score =  234 bits (600), Expect = 2e-77
 Identities = 88/247 (35%), Positives = 128/247 (51%), Gaps = 6/247 (2%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSS 60
            ALVTGG+RG+G    + LA  G  V   SRN  E      +   K G +     CD+S+
Sbjct: 23  VALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSN 82

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
            E+ +KL+E V   F GKL+ ++N A I    P  +   ++   V   N    +++ + A
Sbjct: 83  YEEVKKLLEAVKEKF-GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREA 141

Query: 121 HPLFKASGNGSIVFISSV-GGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
             L + S N SI+ I S+      +P++S Y A KG +  LTK LA EW +  IR N +A
Sbjct: 142 FSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIA 201

Query: 180 PWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
           P   +T M +     P   E LD + ++ P+GR G P+++  +  FL    A Y+TGQII
Sbjct: 202 PGWYRTKMTEAVFSDP---EKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKYVTGQII 258

Query: 240 CVDGGVT 246
            VDGG T
Sbjct: 259 FVDGGWT 265

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score =  231 bits (592), Expect = 1e-76
 Identities = 81/248 (32%), Positives = 113/248 (45%), Gaps = 9/248 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            A VTG   GIG       A  GA +    R    LD    E           V D++  
Sbjct: 13  CAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQE--LGAAVAARIVADVTDA 70

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           E          ++    ++IL+N+A IA +   ++        V + N + +F  S+   
Sbjct: 71  EAMTAAAAEAEAV--APVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFG 128

Query: 122 PLFKASGNGSIVFISSVGGVRGIP--SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
               A G G+IV + S+ G         S Y A KGA++QLT+ LA EWA   +R N +A
Sbjct: 129 RAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALA 188

Query: 180 PWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
           P  + T M     E PE     +     TP+GR GEP E+++   FL  PAASY+TG I+
Sbjct: 189 PGYVATEMTLKMRERPE---LFETWLDMTPMGRCGEPSEIAAAALFLASPAASYVTGAIL 245

Query: 240 CVDGGVTV 247
            VDGG TV
Sbjct: 246 AVDGGYTV 253

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score =  230 bits (590), Expect = 3e-76
 Identities = 66/247 (26%), Positives = 118/247 (47%), Gaps = 3/247 (1%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             +VTG   GIG A  ++ A   +IV      +  L+  + E +  G +V G   D+S +
Sbjct: 9   VVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKK 68

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
           +  E+ +      +  ++++L NNA I   V P  +++ E    V + N  S F+ S+  
Sbjct: 69  KDVEEFVRRTFETY-SRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAV 127

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
            P+    G G IV  +S+ G+RG  + + Y   K  +  LT+++A  +    IR   V P
Sbjct: 128 IPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLP 187

Query: 181 WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
             +KT++     +  E           +   R  EP+++++++ FL    AS++ G  + 
Sbjct: 188 GTVKTNIGLGSSKPSE-LGMRTLTKLMSLSSRLAEPEDIANVIVFLASDEASFVNGDAVV 246

Query: 241 VDGGVTV 247
           VDGG+TV
Sbjct: 247 VDGGLTV 253

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score =  229 bits (587), Expect = 8e-76
 Identities = 83/249 (33%), Positives = 126/249 (50%), Gaps = 6/249 (2%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            A+VTG   GIG A     A+ GA V          +A     +  G K  G  C+++  
Sbjct: 14  VAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDE 73

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           + RE +I+     F GK+ +L+NNA     KP  D+   D       N  S+F LSQLA 
Sbjct: 74  QHREAVIKAALDQF-GKITVLVNNAGGGGPKP-FDMPMSDFEWAFKLNLFSLFRLSQLAA 131

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P  + +G G+I+ ISS+ G      ++ YG+ K A+N LT+N+A +     IR N +AP 
Sbjct: 132 PHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPG 191

Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
            IKT  +          E    + + TP+GR GE  ++++   FLC PAA++I+GQ++ V
Sbjct: 192 AIKTDALATV----LTPEIERAMLKHTPLGRLGEAQDIANAALFLCSPAAAWISGQVLTV 247

Query: 242 DGGVTVTVN 250
            GG    ++
Sbjct: 248 SGGGVQELD 256

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score =  230 bits (588), Expect = 1e-75
 Identities = 74/247 (29%), Positives = 120/247 (48%), Gaps = 5/247 (2%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             +VTGG  GIG AT E  A+ GA V     N+       +E    G K  G   D+SS 
Sbjct: 29  VCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANE---IGSKAFGVRVDVSSA 85

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           +  E ++E  T+ + G++++L+NNA        V I  E    + S N + +F  S+   
Sbjct: 86  KDAESMVEKTTAKW-GRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVI 144

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P+ + +G GSI+  +S      I   + Y A KGA++ LT+ +A + AK+ IR N VAP 
Sbjct: 145 PVMRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPG 204

Query: 182 VIKTSMIKPF-EEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
            I +        E  + ++       +  + R G  +E++  + FL    + + TG I+ 
Sbjct: 205 TIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAMLFLASDRSRFATGSILT 264

Query: 241 VDGGVTV 247
           VDGG ++
Sbjct: 265 VDGGSSI 271

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score =  228 bits (583), Expect = 5e-75
 Identities = 71/247 (28%), Positives = 114/247 (46%), Gaps = 8/247 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            A++TG T GIG A  +     GA V    R +  LDA + E    G    G   D ++ 
Sbjct: 31  IAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAE---IGGGAVGIQADSANL 87

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
            + ++L E V +   G++++L  NA    + P  ++T E        N + V    Q A 
Sbjct: 88  AELDRLYEKVKAEA-GRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKAL 146

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           PL       S+V   S  G  G P+ S+Y A K A+    +N   +     IR NT++P 
Sbjct: 147 PLLA--RGSSVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKDRGIRINTLSPG 204

Query: 182 VIKTSMIKPF--EEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
             +T+ +     ++  +    L+ +A Q P+GR G  +EV++   FL    +S++TG  +
Sbjct: 205 PTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALFLASDDSSFVTGAEL 264

Query: 240 CVDGGVT 246
            VDGG  
Sbjct: 265 FVDGGSA 271

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score =  227 bits (582), Expect = 7e-75
 Identities = 70/255 (27%), Positives = 114/255 (44%), Gaps = 13/255 (5%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             LVTG    IG AT   LA  G  +     N+  L+      + KG +    VCD++S 
Sbjct: 9   VCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSE 68

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
           E     +++V   F GK++ L NNA       P  D  ++D + V + N    FH+ +  
Sbjct: 69  EAVIGTVDSVVRDF-GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAV 127

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
                    G IV  +S+ GV+G P+++ YG  KGA+  LT+  A + A  NIR N ++P
Sbjct: 128 SRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISP 187

Query: 181 WVIKTSMIKPFEEGPEGS-----------EFLDGIARQTPIGRAGEPDEVSSLVAFLCLP 229
             +    +   +   +                  +    P+ R G+ +E+  +VAFL   
Sbjct: 188 GYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAFLLGD 247

Query: 230 AASYITGQIICVDGG 244
            +S++TG  + + GG
Sbjct: 248 DSSFMTGVNLPIAGG 262

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score =  227 bits (580), Expect = 7e-75
 Identities = 66/251 (26%), Positives = 103/251 (41%), Gaps = 20/251 (7%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             LVTGG++GIG A VE L +           Q    A           +     DL+ +
Sbjct: 6   NYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAE---------NLKFIKADLTKQ 56

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           +    +++ +        + +  NA I       DI  E +  V   N  S  +  +   
Sbjct: 57  QDITNVLDIIK---NVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLE 113

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
              K     SIVF  S       P+   Y   KGA+ Q+TK+LA + AK  IR NTV P 
Sbjct: 114 NNLKVGA--SIVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPG 171

Query: 182 VIKTSMIKPFEEGPEGS------EFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT 235
            + T + +   +    +      E      ++ P+ R  +P E++ LV FL    + ++T
Sbjct: 172 TVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLSDKSKFMT 231

Query: 236 GQIICVDGGVT 246
           G +I +DGG T
Sbjct: 232 GGLIPIDGGYT 242

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score =  227 bits (581), Expect = 7e-75
 Identities = 80/254 (31%), Positives = 116/254 (45%), Gaps = 8/254 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             LVTGG RGIG A  +  AR GA+V  C       +        +         DL   
Sbjct: 8   GVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVA------EAIGGAFFQVDLEDE 61

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
            +R + +E       G++++L+NNAAIA     + +   +   V   N  +  HLS LA 
Sbjct: 62  RERVRFVEEAAYAL-GRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAA 120

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
              +  G G+IV ++SV G+      + Y A KG +  LT++LA + A   IR N VAP 
Sbjct: 121 REMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPG 180

Query: 182 VIKTSMIKPFEEGPEGSE-FLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
            I T  +          E           + R G+P+EV+  V FL    AS+ITG I+ 
Sbjct: 181 AIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFITGAILP 240

Query: 241 VDGGVTVTVNVNGL 254
           VDGG+T +  + G 
Sbjct: 241 VDGGMTASFMMAGR 254

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score =  227 bits (581), Expect = 9e-75
 Identities = 77/248 (31%), Positives = 116/248 (46%), Gaps = 14/248 (5%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            ALVTG   GIG A V  L   GA V    R    + A L               DL   
Sbjct: 30  VALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADL-----------HLPGDLREA 78

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
              + L   V +   G+L+I++NNA +       + T  D S     N E+ F + + A 
Sbjct: 79  AYADGLPGAVAAGL-GRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAI 137

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           PL  A+G G+IV ++S  G+R  P  +LY   K A+  LT+ +  + A   IR N V P 
Sbjct: 138 PLMAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPN 197

Query: 182 VIKTSMIKPF--EEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
            + T M++    + G +    +  + R  P+GR  EP++++ +V FL   AA Y+ G ++
Sbjct: 198 EVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFLASDAARYLCGSLV 257

Query: 240 CVDGGVTV 247
            V+GG  V
Sbjct: 258 EVNGGKAV 265

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score =  227 bits (582), Expect = 1e-74
 Identities = 68/247 (27%), Positives = 104/247 (42%), Gaps = 6/247 (2%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            A+VTG   GIG A    LA  G  V     +    DA   +    G        D+S  
Sbjct: 31  VAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI---GCGAAACRVDVSDE 87

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           +Q   +++   + F G ++ L+ NA +  +   +D T ED   V + N    +  ++ A 
Sbjct: 88  QQIIAMVDACVAAF-GGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAA 146

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P     G G+IV +SS+ G   +     YG  K  + QL++  A E     IR+NT+ P 
Sbjct: 147 PRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPA 206

Query: 182 VIKTSMIKPFEEGPEGS--EFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
            + T M +      +G+              GR   P+E++ +V FL    AS ITG   
Sbjct: 207 FVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSDDASMITGTTQ 266

Query: 240 CVDGGVT 246
             DGG  
Sbjct: 267 IADGGTI 273

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score =  227 bits (582), Expect = 1e-74
 Identities = 73/251 (29%), Positives = 114/251 (45%), Gaps = 10/251 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            ALVTGG+RGIG    + L   GA V  C+R+              G        DLSS 
Sbjct: 31  IALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIPADLSSE 89

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
               +L + +  +   +L+IL+NNA  ++              V   N  SVF   Q   
Sbjct: 90  AGARRLAQALGELS-ARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLL 148

Query: 122 PLFKASGN----GSIVFISSVGGVRGIP-SVSLYGAYKGAMNQLTKNLACEWAKDNIRTN 176
           PL + S +      ++ I SV G+  +      YG  K A++QL++ LA E   ++I  N
Sbjct: 149 PLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKELVGEHINVN 208

Query: 177 TVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG 236
            +AP    + M +     P+    L+  +   P+GR G P+E+++L   L   A +Y+TG
Sbjct: 209 VIAPGRFPSRMTRHIANDPQ---ALEADSASIPMGRWGRPEEMAALAISLAGTAGAYMTG 265

Query: 237 QIICVDGGVTV 247
            +I +DGG  +
Sbjct: 266 NVIPIDGGFHL 276

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  227 bits (581), Expect = 2e-74
 Identities = 71/266 (26%), Positives = 122/266 (45%), Gaps = 16/266 (6%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFK---VTGSVCDL 58
           + ++TG + GIG +     A+ GA V    RN+  L+    +    G     +   V D+
Sbjct: 28  SVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADV 87

Query: 59  SSREQREKLIETVTSIFQGKLNILINNAAIAFVKPT--VDITAEDMSTVSSTNFESVFHL 116
           +    ++ +I T  + F GK++IL+NNA       T   D   E        NF++V  +
Sbjct: 88  TEASGQDDIINTTLAKF-GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEM 146

Query: 117 SQLAHPLFKASGNGSIVFISS-VGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
           +Q        +  G IV +SS V G +       Y   K A++Q T+  A +  +  +R 
Sbjct: 147 TQKTKEHLIKTK-GEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRV 205

Query: 176 NTVAPWVIKTSMIKPFEEGPEGSE----FLDGIARQTPIGRAGEPDEVSSLVAFLC-LPA 230
           N+V+P  + T  +         S+    F+       P+G  G+P+E+++++ FL     
Sbjct: 206 NSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLADRNL 265

Query: 231 ASYITGQIICVDGGVTVTVNVNGLRS 256
           +SYI GQ I  DGG T+   V G+++
Sbjct: 266 SSYIIGQSIVADGGSTL---VMGMQT 288

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score =  225 bits (576), Expect = 4e-74
 Identities = 73/249 (29%), Positives = 120/249 (48%), Gaps = 5/249 (2%)

Query: 2   TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
            ALVTG +RG+G A    LA  G  IV   +R++        E +  G KV     ++  
Sbjct: 6   CALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQ 65

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
             + +++ + +   F G+L++ +NNAA   ++P +++         + N +++   +Q A
Sbjct: 66  PAKIKEMFQQIDETF-GRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEA 124

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
             L + +G G IV ISS+G +R + + +  G  K A+  LT+ LA E +   I  N V+ 
Sbjct: 125 AKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSG 184

Query: 181 WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
             I T      +  P   + L+   + TP GR  E  ++   V FL    A  I GQ I 
Sbjct: 185 GAIDTDA---LKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVSSKADMIRGQTII 241

Query: 241 VDGGVTVTV 249
           VDGG ++ V
Sbjct: 242 VDGGRSLLV 250

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score =  224 bits (574), Expect = 5e-74
 Identities = 79/247 (31%), Positives = 118/247 (47%), Gaps = 15/247 (6%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            ALVTGG+RGIG A  E L   G  V   SRN  E                    DL  +
Sbjct: 4   KALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQ--------SLGAVPLPTDLE-K 54

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           +  + L++       G L++L++ AA+   KP ++++ E+   V   + +  F L+Q A 
Sbjct: 55  DDPKGLVKRALEAL-GGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAA 113

Query: 122 PLFKASGNGSIVFISSVGG--VRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
           P    +G G ++FI SV      G   +  Y   K A+  LT+ LA EWA+  IR N + 
Sbjct: 114 PHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLC 173

Query: 180 PWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
           P  ++T    P  + PE     + I  + P+GR   P+E++ + A LC   A Y+TGQ +
Sbjct: 174 PGYVETEFTLPLRQNPE---LYEPITARIPMGRWARPEEIARVAAVLCGDEAEYLTGQAV 230

Query: 240 CVDGGVT 246
            VDGG  
Sbjct: 231 AVDGGFL 237

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score =  225 bits (577), Expect = 6e-74
 Identities = 72/255 (28%), Positives = 99/255 (38%), Gaps = 4/255 (1%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            A+VTG + GIG A     AR GA V   +RN   L     E    G +      D+   
Sbjct: 10  IAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDE 69

Query: 62  EQREKLIETVTSIFQGKLNILINNAAI-AFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
              E L+E     F G L+   NNA     +     ++ E       TN  S F  ++  
Sbjct: 70  ALHEALVELAVRRF-GGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQ 128

Query: 121 HPLFKASGNGSIVFISSV-GGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
            P   A G GS+ F SS  G   G   V+ Y A K  +  L + LA E     IR N + 
Sbjct: 129 VPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARGIRVNALL 188

Query: 180 PWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
           P    T        G    E    +     + R   P+E++    +L    AS++TG  +
Sbjct: 189 PGGTDTPANFANLPG-AAPETRGFVEGLHALKRIARPEEIAEAALYLASDGASFVTGAAL 247

Query: 240 CVDGGVTVTVNVNGL 254
             DGG +VT     L
Sbjct: 248 LADGGASVTKAAENL 262

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  225 bits (577), Expect = 6e-74
 Identities = 75/259 (28%), Positives = 122/259 (47%), Gaps = 15/259 (5%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF---KVTGSVCDL 58
            A++TG + GIG AT    AR GA V    R+   L+    +    G     V   V D+
Sbjct: 8   VAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADV 67

Query: 59  SSREQREKLIETVTSIFQGKLNILINNAAIAFV----KPTVDITAEDMSTVSSTNFESVF 114
           ++   +++++ T    F GKL+IL+NNA  A      K     + E      + N  SV 
Sbjct: 68  TTDAGQDEILSTTLGKF-GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVI 126

Query: 115 HLSQLAHPLFKASGNGSIVFISSV-GGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNI 173
            L++ A P   ++  G IV ISS+  G+   P    Y   K A++Q T+N A +  +  I
Sbjct: 127 ALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGI 185

Query: 174 RTNTVAPWVIKTSMIKPFEEGPEGSE----FLDGIARQTPIGRAGEPDEVSSLVAFLCL- 228
           R N+++P ++ T          E S+     +  +    P G  G+P +++ ++AFL   
Sbjct: 186 RVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFLADR 245

Query: 229 PAASYITGQIICVDGGVTV 247
             +SYI G  + VDGG ++
Sbjct: 246 KTSSYIIGHQLVVDGGSSL 264

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  225 bits (575), Expect = 1e-73
 Identities = 74/259 (28%), Positives = 124/259 (47%), Gaps = 15/259 (5%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF---KVTGSVCDL 58
           T ++TG + GIG  T    A+ GA V    R+   L+         G    +V   V D+
Sbjct: 8   TVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADV 67

Query: 59  SSREQREKLIETVTSIFQGKLNILINNAAIA----FVKPTVDITAEDMSTVSSTNFESVF 114
           ++ + ++++I +    F GK+++L+NNA  A    F     D   +        N ++V 
Sbjct: 68  TTEDGQDQIINSTLKQF-GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVI 126

Query: 115 HLSQLAHPLFKASGNGSIVFISS-VGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNI 173
            +++   P   AS  G IV +SS V G +  P    Y   K A++Q T++ A + AK  I
Sbjct: 127 EMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGI 185

Query: 174 RTNTVAPWVIKTSMIKPFEEGPEGSE----FLDGIARQTPIGRAGEPDEVSSLVAFLCLP 229
           R N+V+P +++T          + S+    F+       PIG AG+P+ +++++ FL   
Sbjct: 186 RVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFLADR 245

Query: 230 AAS-YITGQIICVDGGVTV 247
             S YI GQ I  DGG ++
Sbjct: 246 NLSFYILGQSIVADGGTSL 264

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score =  223 bits (572), Expect = 1e-73
 Identities = 74/252 (29%), Positives = 113/252 (44%), Gaps = 8/252 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            ALVTG  +GIG A    L + G  V     N     A   E    G        D+S R
Sbjct: 4   VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDR 63

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           +Q    +E       G  ++++NNA +A   P   IT E +  V + N + V    Q A 
Sbjct: 64  DQVFAAVEQARKTL-GGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAV 122

Query: 122 PLFKASGN-GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
             FK  G+ G I+   S  G  G P +++Y + K A+  LT+  A + A   I  N   P
Sbjct: 123 EAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCP 182

Query: 181 WVIKTSMIKPFEE------GPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYI 234
            ++KT M    +       G          A++  +GR  EP++V++ V++L  P + Y+
Sbjct: 183 GIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDYM 242

Query: 235 TGQIICVDGGVT 246
           TGQ + +DGG+ 
Sbjct: 243 TGQSLLIDGGMV 254

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score =  223 bits (571), Expect = 2e-73
 Identities = 69/249 (27%), Positives = 101/249 (40%), Gaps = 8/249 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE-WKNKGFKVTGSVCDLSS 60
            A+VTG + G G A        G  V     +   L+      W     KV     D++ 
Sbjct: 4   VAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVAD 63

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIA---FVKPTVDITAEDMSTVSSTNFESVFHLS 117
                  I      F G +++L+NNA I              E    V + N   +F   
Sbjct: 64  EGDVNAAIAATMEQF-GAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGC 122

Query: 118 QLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
           +   P     G G IV I+SV  +   P  S Y   KGA+ QLTK++A ++A   IR N 
Sbjct: 123 RAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNA 182

Query: 178 VAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ 237
           V P +I+T M +   + P   E  D +  + P    G   +V+  V FL    A+Y+ G 
Sbjct: 183 VCPGMIETPMTQWRLDQP---ELRDQVLARIPQKEIGTAAQVADAVMFLAGEDATYVNGA 239

Query: 238 IICVDGGVT 246
            + +DG  T
Sbjct: 240 ALVMDGAYT 248

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score =  223 bits (570), Expect = 4e-73
 Identities = 78/251 (31%), Positives = 120/251 (47%), Gaps = 7/251 (2%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF--KVTGSVCDLS 59
             L+TGG  G+G AT   LA  GA +     +   L+A            +V  +V D+S
Sbjct: 15  VVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVS 74

Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQ 118
              Q E  +   T  F G+++   NNA I     PT   TA +   V S N   VF   +
Sbjct: 75  DEAQVEAYVTATTERF-GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLE 133

Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
               + +  G+G +V  +SVGG+RGI + S Y A K  +  LT+N A E+ +  IR N +
Sbjct: 134 KVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAI 193

Query: 179 APWVIKTSMIKPFEEGPEGS---EFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT 235
           AP  I T M++   +  +     +  +   +  P  R GE  E++++VAFL    ASY+ 
Sbjct: 194 APGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDASYVN 253

Query: 236 GQIICVDGGVT 246
             ++ +DGG +
Sbjct: 254 ATVVPIDGGQS 264

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score =  222 bits (568), Expect = 7e-73
 Identities = 70/252 (27%), Positives = 103/252 (40%), Gaps = 11/252 (4%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           +AL+TG  RGIG A  E   R GA V     +         E    G        D++ +
Sbjct: 10  SALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAE---IGPAAYAVQMDVTRQ 66

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           +  +  I        G L+IL+NNAA+  + P V+IT E    + + N        Q A 
Sbjct: 67  DSIDAAIAATVEHA-GGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAA 125

Query: 122 PLFKASGN-GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
               A G  G I+ ++S  G RG   V++Y A K A+  LT++   +  K  I  N +AP
Sbjct: 126 RQMIAQGRGGKIINMASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAP 185

Query: 181 WVIKTSMIKPF------EEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYI 234
            V+               E     E    +    P GR G  ++++ +  FL    + YI
Sbjct: 186 GVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIFLASAESDYI 245

Query: 235 TGQIICVDGGVT 246
             Q   VDGG  
Sbjct: 246 VSQTYNVDGGNW 257

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score =  222 bits (569), Expect = 7e-73
 Identities = 70/247 (28%), Positives = 110/247 (44%), Gaps = 10/247 (4%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            A++TG   GIG  T   LAR GA V      + +L          G      V DL++ 
Sbjct: 13  VAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAAS---VGRGAVHHVVDLTNE 69

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVK--PTVDITAEDMSTVSSTNFESVFHLSQL 119
                LI+     F G+L+I+ NNAA +         +T +      + N      + + 
Sbjct: 70  VSVRALIDFTIDTF-GRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKY 128

Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
           A P   ++G G+IV ISS          + Y   K A+  LT+ +A ++ +  +R N +A
Sbjct: 129 AIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIA 188

Query: 180 PWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
           P +++T  ++           +D  A     GR GEP E++ LV FL    A++ITGQ+I
Sbjct: 189 PGLVRTPRLEVGLPQ----PIVDIFATHHLAGRIGEPHEIAELVCFLASDRAAFITGQVI 244

Query: 240 CVDGGVT 246
             D G+ 
Sbjct: 245 AADSGLL 251

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score =  222 bits (568), Expect = 8e-73
 Identities = 74/252 (29%), Positives = 119/252 (47%), Gaps = 10/252 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLS 59
            A+VTGG +GIG    E+LA  G    V    + + +    +   +    K      D++
Sbjct: 4   VAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVT 63

Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
            +   +  I+       G  ++L+NNA IA +KP +++T ED+  + S N  SVF   Q 
Sbjct: 64  DKANFDSAIDEAAEKL-GGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQA 122

Query: 120 AHPLFKASGN-GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
           A   F   G  G I+  +S+  ++G P +S Y   K A+  LT+  A E A      N  
Sbjct: 123 ASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAY 182

Query: 179 APWVIKTSMIKPFEE------GPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAAS 232
           AP ++ T M +  +       G    E     +    +GR   P++V+ LV+FL    ++
Sbjct: 183 APGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVSFLASENSN 242

Query: 233 YITGQIICVDGG 244
           Y+TGQ++ VDGG
Sbjct: 243 YVTGQVMLVDGG 254

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score =  222 bits (569), Expect = 9e-73
 Identities = 76/248 (30%), Positives = 119/248 (47%), Gaps = 10/248 (4%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            AL+TG + GIG       A  GA V   +R+   L     E    G K     CD++  
Sbjct: 34  RALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQP 93

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           +Q   +++ +T    G ++I + NA I  V+  +D+  E+   +  TN   VF  +Q A 
Sbjct: 94  DQVRGMLDQMTGEL-GGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAA 152

Query: 122 PLFKASGN-GSIVFISSVGGVRGIP--SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
                 G  G+I+  +S+ G        VS Y   K A+  LTK +A E A   IR N+V
Sbjct: 153 RAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSV 212

Query: 179 APWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI 238
           +P  I+T +++P  +      +      + P+GR G P+E++ L  +L   A+SY+TG  
Sbjct: 213 SPGYIRTELVEPLAD------YHALWEPKIPLGRMGRPEELTGLYLYLASAASSYMTGSD 266

Query: 239 ICVDGGVT 246
           I +DGG T
Sbjct: 267 IVIDGGYT 274

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score =  222 bits (568), Expect = 9e-73
 Identities = 77/256 (30%), Positives = 128/256 (50%), Gaps = 18/256 (7%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            A+VTGG+ GIG A V+ L R+GA V + S ++         +K           D+++ 
Sbjct: 16  VAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFK----------IDVTNE 65

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           E+ ++ +E  T  + G+++IL+NNA I    P      E    +   N    + +++   
Sbjct: 66  EEVKEAVEKTTKKY-GRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTI 124

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P+  A G+GSI+ I+SV       + + Y   K A+  LT+++A ++A   IR N V P 
Sbjct: 125 PVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAP-KIRCNAVCPG 183

Query: 182 VIKTSMIKPFEEGPEGS------EFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT 235
            I T M+    +   G         ++   RQ P+GR G P+EV+ +VAFL    +S+IT
Sbjct: 184 TIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLASDRSSFIT 243

Query: 236 GQIICVDGGVTVTVNV 251
           G  + VDGG+   + +
Sbjct: 244 GACLTVDGGLLSKLPI 259

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score =  222 bits (567), Expect = 1e-72
 Identities = 83/252 (32%), Positives = 121/252 (48%), Gaps = 11/252 (4%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            A+VTGG++GIG A    L + GA V     + +   A +   +N GF V     D++ R
Sbjct: 14  KAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAV---EVDVTKR 70

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
              +  ++       G  ++L  NA ++ ++P VDIT E+       N   VF  +Q+A 
Sbjct: 71  ASVDAAMQKAIDAL-GGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIAC 129

Query: 122 PLFKASGN-GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
             F AS   G IV  +S+    G P ++ Y A K A+   T+ LA E A  NIR N V P
Sbjct: 130 RHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCP 189

Query: 181 WVIKTSMIK------PFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYI 234
             +KT+M +          G             TP+GR  EP++V+ +V FL   AA ++
Sbjct: 190 GFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVFLASDAARFM 249

Query: 235 TGQIICVDGGVT 246
           TGQ I V GGV 
Sbjct: 250 TGQGINVTGGVR 261

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score =  221 bits (566), Expect = 1e-72
 Identities = 74/246 (30%), Positives = 105/246 (42%), Gaps = 8/246 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            A+V GGT G+G ATV  L   GA V    RN+  +     E    G +V     D++  
Sbjct: 10  KAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREE---FGPRVHALRSDIADL 66

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
            +   L         G +++L  NA ++ ++P   ++        + N +  F   Q   
Sbjct: 67  NEIAVLGAAAGQTL-GAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLT 125

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           PL +  G  SIVF SSV    G P +S+Y A K A+      LA E     IR N+V+P 
Sbjct: 126 PLIREGG--SIVFTSSVADEGGHPGMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPG 183

Query: 182 VIKTSMIKPFEEGPEGSE-FLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
            I T               F       TP+ R G  DEV+  V FL    A++ TG  + 
Sbjct: 184 FIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVLFLAFE-ATFTTGAKLA 242

Query: 241 VDGGVT 246
           VDGG+ 
Sbjct: 243 VDGGLG 248

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score =  222 bits (567), Expect = 2e-72
 Identities = 74/254 (29%), Positives = 112/254 (44%), Gaps = 8/254 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            AL+TG   GIG AT   LA  G  V    R + E++    E    G +      D+S  
Sbjct: 30  VALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDE 89

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
            Q    +  +   F G L+I++ NA I     P  D+   +     + N    F    L 
Sbjct: 90  LQMRNAVRDLVLKF-GHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLT 148

Query: 121 HPLFKASGNGSIVFISSVGGVR--GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
            P  K  G G+IV +SS+ G R    P  + Y A K A   + + LA E  K +IR N V
Sbjct: 149 VPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELGKHHIRVNAV 208

Query: 179 APWVIKTSMIKPFEEGPE--GSEFLDGIARQTPI--GRAGEPDEVSSLVAFLCLPAASYI 234
            P  I+T++    +   E   +  ++    Q PI  G+ G  ++V+ L+ FL    A ++
Sbjct: 209 CPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVSERARHV 268

Query: 235 TGQIICVDGGVTVT 248
           TG  + +DGG  + 
Sbjct: 269 TGSPVWIDGGQGLL 282

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score =  220 bits (563), Expect = 2e-72
 Identities = 57/246 (23%), Positives = 96/246 (39%), Gaps = 10/246 (4%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            ALVT      G A VE L + G  V     +  +   R        F+         + 
Sbjct: 3   IALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQ------RFESENPGTIALAE 56

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIA---FVKPTVDITAEDMSTVSSTNFESVFHLSQ 118
           ++ E+L++         ++ +++N  I       P    +  D+  +          L Q
Sbjct: 57  QKPERLVDATLQHG-EAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQ 115

Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
            A    +A+G  S++FI+S  G + +    LYG  + A   L ++ A   ++D I    +
Sbjct: 116 SAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARAATVALVESAAKTLSRDGILLYAI 175

Query: 179 APWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI 238
            P         P  +     E  + + R  P+GR G PDE+ +L+ FL    A+ I GQ 
Sbjct: 176 GPNFFNNPTYFPTSDWENNPELRERVDRDVPLGRLGRPDEMGALITFLASRRAAPIVGQF 235

Query: 239 ICVDGG 244
               GG
Sbjct: 236 FAFTGG 241

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score =  220 bits (563), Expect = 4e-72
 Identities = 58/247 (23%), Positives = 95/247 (38%), Gaps = 11/247 (4%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           TA+VT      G  +   L+  G  V     +  + D        + F  T       S 
Sbjct: 3   TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDEL------EAFAETYPQLKPMSE 56

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
           ++  +LIE VTS + G++++L++N   A   +P      ED            F L    
Sbjct: 57  QEPAELIEAVTSAY-GQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAV 115

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
               K   +G I+FI+S         +S Y + +     L   L+ E  + NI    + P
Sbjct: 116 ASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGP 175

Query: 181 WVIKTSMIKPFEEGPEGS---EFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ 237
             + +     F          E +  + + T + R G   E+  LVAFL   +  Y+TGQ
Sbjct: 176 NYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYLTGQ 235

Query: 238 IICVDGG 244
           +  + GG
Sbjct: 236 VFWLAGG 242

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score =  219 bits (561), Expect = 8e-72
 Identities = 72/251 (28%), Positives = 116/251 (46%), Gaps = 10/251 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK--NKGFKVTGSVCDLS 59
            A+VT G+ G+G A+  ELAR GA +   SRN+ +L+A          G +V     D+ 
Sbjct: 9   LAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIR 68

Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
                ++L E    +  G  +IL+ +         +++  ED          S   + + 
Sbjct: 69  EPGDIDRLFEKARDL--GGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRR 126

Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
           A       G G +V+I SV  +R    ++L    +  +  + + LA E A   +  N V 
Sbjct: 127 AAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAPHGVTVNAVL 186

Query: 180 PWVIKTSMIKPF------EEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASY 233
           P +I T  ++          G    E L  +A + P+GR G+P+E++S+VAFL    AS+
Sbjct: 187 PSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVAFLASEKASF 246

Query: 234 ITGQIICVDGG 244
           ITG +I VDGG
Sbjct: 247 ITGAVIPVDGG 257

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score =  219 bits (561), Expect = 9e-72
 Identities = 70/248 (28%), Positives = 117/248 (47%), Gaps = 6/248 (2%)

Query: 2   TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
             ++TG + G+G +     A   A +V      + E ++ L E K  G +      D++ 
Sbjct: 9   VVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTV 68

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
                 L+++    F GKL+++INNA +     + +++  D + V  TN    F  S+ A
Sbjct: 69  ESDVINLVQSAIKEF-GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREA 127

Query: 121 HPLF-KASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
              F +    G+++ +SSV      P    Y A KG M  +T+ LA E+A   IR N + 
Sbjct: 128 IKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIG 187

Query: 180 PWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
           P  I T +     E     E    +    P+G  GEP+E++++ A+L    ASY+TG  +
Sbjct: 188 PGAINTPIN---AEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTGITL 244

Query: 240 CVDGGVTV 247
             DGG+T+
Sbjct: 245 FADGGMTL 252

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score =  218 bits (559), Expect = 3e-71
 Identities = 68/258 (26%), Positives = 116/258 (44%), Gaps = 9/258 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             +VTGG RGIG   V      GA V  C ++    ++     + +       +CD++  
Sbjct: 11  VVVVTGGGRGIGAGIVRAFVNSGARVVICDKD----ESGGRALEQELPGAVFILCDVTQE 66

Query: 62  EQREKLIETVTSIFQGKLNILINNAAI-AFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
           +  + L+      F G+L+ ++NNA      +   + +A+    +   N    + L++LA
Sbjct: 67  DDVKTLVSETIRRF-GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLA 125

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
            P  + S  G+++ ISS+ G  G      Y A KGA+  +TK LA + +   +R N ++P
Sbjct: 126 LPYLRKSQ-GNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISP 184

Query: 181 WVIKTSMIKPF-EEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
             I T + +      P+    +       P+GR G+P EV +   FL    A++ TG  +
Sbjct: 185 GNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE-ANFCTGIEL 243

Query: 240 CVDGGVTVTVNVNGLRST 257
            V GG  +       RST
Sbjct: 244 LVTGGAELGYGCKASRST 261

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score =  218 bits (558), Expect = 3e-71
 Identities = 74/251 (29%), Positives = 115/251 (45%), Gaps = 10/251 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            AL+TG   G G    +  A+ GA V    R++   +    E    G        D+S  
Sbjct: 11  VALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI---GDAALAVAADISKE 67

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
              +  +E   S F GK++IL+NNA I    +    +  E+   +   N   V+ ++   
Sbjct: 68  ADVDAAVEAALSKF-GKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKL 126

Query: 121 HPLFKASGNGS----IVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTN 176
            P FK +G       I+ ++S G  R  P+++ Y A KG +  +TK LA E A   IR  
Sbjct: 127 IPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELAPAKIRVV 186

Query: 177 TVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG 236
            + P   +T ++  F  G +  E         P+GR  +PD+++   AFLC P AS ITG
Sbjct: 187 ALNPVAGETPLLTTF-MGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLCSPQASMITG 245

Query: 237 QIICVDGGVTV 247
             + VDGG ++
Sbjct: 246 VALDVDGGRSI 256

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score =  218 bits (557), Expect = 3e-71
 Identities = 72/256 (28%), Positives = 118/256 (46%), Gaps = 19/256 (7%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             +VTG + GIG A  E     G+ V   S +                K     CD+++ 
Sbjct: 10  VVIVTGASMGIGRAIAERFVDEGSKVIDLSIHD-----------PGEAKYDHIECDVTNP 58

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           +Q +  I+ +   + G +++L+NNA I        ++  +   +   N    ++ S+ A 
Sbjct: 59  DQVKASIDHIFKEY-GSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAI 117

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P    S + SIV ISSV       + S Y   K A+  LTK++A ++A   +R N V P 
Sbjct: 118 PYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAP-LLRCNAVCPA 176

Query: 182 VIKTSMIKPFEEGPEGS------EFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT 235
            I T +++   E   GS      + +     + P+ R G+P EV+S VAFL    AS+IT
Sbjct: 177 TIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLASREASFIT 236

Query: 236 GQIICVDGGVTVTVNV 251
           G  + VDGG+++   +
Sbjct: 237 GTCLYVDGGLSIRAPI 252

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score =  217 bits (556), Expect = 4e-71
 Identities = 78/251 (31%), Positives = 108/251 (43%), Gaps = 10/251 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           T ++TGG RG+G     +    GA V        E  A   E    G        D++  
Sbjct: 7   TVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARE---LGDAARYQHLDVTIE 63

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           E  ++++      F G ++ L+NNA I+        + E    V   N   VF   +   
Sbjct: 64  EDWQRVVAYAREEF-GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVI 122

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P  K +G GSIV ISS  G+ G+   S YGA K  +  L+K  A E   D IR N+V P 
Sbjct: 123 PAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPG 182

Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAG-EPDEVSSLVAFLCLPAASYITGQIIC 240
           +  T M              +G    TP+GR G EP E++  V  L    +SY+TG  + 
Sbjct: 183 MTYTPMTAETGI-----RQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAELA 237

Query: 241 VDGGVTVTVNV 251
           VDGG T    V
Sbjct: 238 VDGGWTTGPTV 248

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score =  217 bits (556), Expect = 9e-71
 Identities = 65/249 (26%), Positives = 107/249 (42%), Gaps = 11/249 (4%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            A VTG + GIG A  E  A+ GA V     +    +   H  K  G       C++S  
Sbjct: 36  VASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDP 95

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTV--DITAEDMSTVSSTNFESVFHLSQL 119
           +  E+ I      F G +++ + NA + + +         +  + + S +   V++ S  
Sbjct: 96  KSVEETISQQEKDF-GTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHN 154

Query: 120 AHPLFKASGNGSIVFISSVGGVRGIP--SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
              +FK +G GS++  SS+ G         + Y   K A   L K+LA EWA    R NT
Sbjct: 155 IGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAIEWAP-FARVNT 213

Query: 178 VAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ 237
           ++P  I T +     +     +      + TP+GR G   E+     +L   A+++ TG 
Sbjct: 214 ISPGYIDTDITDFASK-----DMKAKWWQLTPLGREGLTQELVGGYLYLASNASTFTTGS 268

Query: 238 IICVDGGVT 246
            + +DGG T
Sbjct: 269 DVVIDGGYT 277

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score =  215 bits (550), Expect = 4e-70
 Identities = 79/251 (31%), Positives = 107/251 (42%), Gaps = 9/251 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           TALVTG T GIG    + LAR GA +               E    G K      DLS  
Sbjct: 6   TALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALA--EIARHGVKAVHHPADLSDV 63

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
            Q E L       F G ++IL+NNA I  V P      E    + + N  +VFH ++LA 
Sbjct: 64  AQIEALFALAEREF-GGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLAL 122

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P  +A   G I+ I+SV G+ G    + Y A K  +  LTK +  E A  N+  N + P 
Sbjct: 123 PGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPG 182

Query: 182 VIKTSMIK------PFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT 235
            + T +++          G       D +A + P      P+ +  LV FLC  A S + 
Sbjct: 183 WVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCSEAGSQVR 242

Query: 236 GQIICVDGGVT 246
           G    VDGG  
Sbjct: 243 GAAWNVDGGWL 253

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score =  215 bits (549), Expect = 4e-70
 Identities = 76/249 (30%), Positives = 107/249 (42%), Gaps = 11/249 (4%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             +VTG   GIG A  E LAR GA V     N    +A   +    G        D+S  
Sbjct: 11  VGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDP 70

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFV---KPTVDITAEDMSTVSSTNFESVFHLSQ 118
           E  + + +   + F G ++ L+NNAAI         + I  E      S N +     ++
Sbjct: 71  ESAKAMADRTLAEF-GGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTR 129

Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
             +      G G+IV  SS            YG  K  +N LT+ L+ E    NIR N +
Sbjct: 130 AVYKKMTKRGGGAIVNQSSTAAWLYSNY---YGLAKVGINGLTQQLSRELGGRNIRINAI 186

Query: 179 APWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI 238
           AP  I T   +     P+  E +D I +  P+ R G PD++  +  FL    AS+ITGQI
Sbjct: 187 APGPIDTEANR--TTTPK--EMVDDIVKGLPLSRMGTPDDLVGMCLFLLSDEASWITGQI 242

Query: 239 ICVDGGVTV 247
             VDGG  +
Sbjct: 243 FNVDGGQII 251

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score =  214 bits (548), Expect = 5e-70
 Identities = 74/248 (29%), Positives = 117/248 (47%), Gaps = 9/248 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            A++TGGT GIG A   +    GA V    R+    +           ++     D S  
Sbjct: 8   VAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD-QIQFFQHDSSDE 66

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           +   KL +     F G ++ L+NNA IA  K   + T  +   + + N + VF  ++L  
Sbjct: 67  DGWTKLFDATEKAF-GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGI 125

Query: 122 PLFKASGNG-SIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA--KDNIRTNTV 178
              K  G G SI+ +SS+ G  G PS+  Y A KGA+  ++K+ A + A    ++R NTV
Sbjct: 126 QRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTV 185

Query: 179 APWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI 238
            P  IKT ++        G+E       +TP+G  GEP++++ +  +L    + + TG  
Sbjct: 186 HPGYIKTPLVDDLP----GAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFATGSE 241

Query: 239 ICVDGGVT 246
             VDGG T
Sbjct: 242 FVVDGGYT 249

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score =  213 bits (545), Expect = 2e-69
 Identities = 70/247 (28%), Positives = 112/247 (45%), Gaps = 22/247 (8%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             ++TG ++GIG   V         V   SR+                 +     D+S  
Sbjct: 30  VVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPS---------ADPDIHTVAGDISKP 80

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           E  ++++      F G+++ L+NNA +   KP V++T ED       N    FH++Q A 
Sbjct: 81  ETADRIVREGIERF-GRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAA 139

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVS--LYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
                 G+G IV I++    + +  +   L    KG +N +T++LA E+++  +R N V+
Sbjct: 140 AEMLKQGSGHIVSITTSLVDQPMVGMPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVS 199

Query: 180 PWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
           P VIKT M           E    +A   P+GR GE  +V   V +  L  A +ITG+I+
Sbjct: 200 PGVIKTPMHPA--------ETHSTLAGLHPVGRMGEIRDVVDAVLY--LEHAGFITGEIL 249

Query: 240 CVDGGVT 246
            VDGG  
Sbjct: 250 HVDGGQN 256

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score =  213 bits (544), Expect = 3e-69
 Identities = 68/260 (26%), Positives = 108/260 (41%), Gaps = 17/260 (6%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFK--VTGSVCDLS 59
           TALVTG T GIG A    L   GA V    R +  ++  + E + +     +   V DL 
Sbjct: 12  TALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLG 71

Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
           + +  + +IE        K++ILINN  I       DI  ED   +   N  S   L++ 
Sbjct: 72  TEQGCQDVIEKY-----PKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRS 126

Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
                     G ++FI+S   +     ++ Y A K     L+++LA      N+  NT+ 
Sbjct: 127 YLKKMIERKEGRVIFIASEAAIMPSQEMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIM 186

Query: 180 PWVIKTSMIKPFEEGPEGS----------EFLDGIARQTPIGRAGEPDEVSSLVAFLCLP 229
           P    T  ++        +           F+      + I R   P+E++ LV FL  P
Sbjct: 187 PGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEIAHLVTFLSSP 246

Query: 230 AASYITGQIICVDGGVTVTV 249
            +S I G  + +DGG+  +V
Sbjct: 247 LSSAINGSALRIDGGLVRSV 266

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score =  212 bits (543), Expect = 5e-69
 Identities = 75/255 (29%), Positives = 116/255 (45%), Gaps = 15/255 (5%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARL-HEWKNKGFKVTGSVCDLSS 60
           T +VTGG RGIG A    +A  GA V    R+  +         K  G K     CD+S+
Sbjct: 16  TIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSN 75

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
            +   K I+ + +   G ++ LI NA ++ VKP  ++T ED + V   N   VF+  +  
Sbjct: 76  TDIVTKTIQQIDADL-GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAV 134

Query: 121 HPLF-KASGNGSIVFISSVGG-------VRGIPSVSLYGAYKGAMNQLTKNLACEWAKDN 172
             L+ +    GSIV  SS+         + G  +   Y + K A + L K LA EWA   
Sbjct: 135 AKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAG 194

Query: 173 IRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAAS 232
           IR N ++P  + T      ++     +  D  A   P+ R  +P+E++     L    A+
Sbjct: 195 IRVNALSPGYVNTDQTAHMDK-----KIRDHQASNIPLNRFAQPEEMTGQAILLLSDHAT 249

Query: 233 YITGQIICVDGGVTV 247
           Y+TG    +DGG  +
Sbjct: 250 YMTGGEYFIDGGQLI 264

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score =  211 bits (540), Expect = 8e-69
 Identities = 59/248 (23%), Positives = 113/248 (45%), Gaps = 12/248 (4%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             ++T   +GIG A     AR GA V     N+ +L         K   +   V D++ +
Sbjct: 8   VIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQE-----LEKYPGIQTRVLDVTKK 62

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           +Q ++    V      +L++L N A        +D   +D     + N  S++ + +   
Sbjct: 63  KQIDQFANEV-----ERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFL 117

Query: 122 PLFKASGNGSIVFISSV-GGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
           P   A  +G+I+ +SSV   V+G+ +  +Y   K A+  LTK++A ++ +  IR N V P
Sbjct: 118 PKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCP 177

Query: 181 WVIKTSMIKPFEEGPEGSE-FLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
             + T  ++   +     E   +   ++   GR    +E++ L  +L    ++Y+TG  +
Sbjct: 178 GTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVTGNPV 237

Query: 240 CVDGGVTV 247
            +DGG ++
Sbjct: 238 IIDGGWSL 245

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score =  212 bits (542), Expect = 1e-68
 Identities = 68/254 (26%), Positives = 111/254 (43%), Gaps = 10/254 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE--WKNKGFKVTGSVCDLS 59
           TA++TG T GIG A    LA+ GA +        +    + +         V     D++
Sbjct: 27  TAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMT 86

Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
              +   ++  V   F G  +IL+NNA + FV+   D   E    + + N  S FH  + 
Sbjct: 87  KPSEIADMMAMVADRF-GGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRG 145

Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
           A P  K  G G I+ I+S  G+   P  S Y A K  +  LTK +A E A+  +  N++ 
Sbjct: 146 AIPPMKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSIC 205

Query: 180 PWVIKTSMIKPF-------EEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAAS 232
           P  + T +++             E     + + +  P  +    ++V+SL  +L    A+
Sbjct: 206 PGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASLALYLAGDDAA 265

Query: 233 YITGQIICVDGGVT 246
            ITG  + +DGG T
Sbjct: 266 QITGTHVSMDGGWT 279

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score =  210 bits (538), Expect = 2e-68
 Identities = 66/251 (26%), Positives = 107/251 (42%), Gaps = 16/251 (6%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
              VTG  +GIG+AT       GA V          D    +   + +     V D++  
Sbjct: 9   NVWVTGAGKGIGYATALAFVEAGAKV-------TGFDQAFTQ---EQYPFATEVMDVADA 58

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
            Q  ++ + + +    +L+ L+N A I  +  T  ++ ED     + N    F+L Q   
Sbjct: 59  AQVAQVCQRLLAET-ERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTM 117

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
             F+    G+IV ++S         +S YGA K A+  L  ++  E A   +R N V+P 
Sbjct: 118 NQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPG 177

Query: 182 VIKTSMIKPFEEGPEGSE-----FLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG 236
              T M +      +  E     F +      P+G+   P E+++ + FL    AS+IT 
Sbjct: 178 STDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLASDLASHITL 237

Query: 237 QIICVDGGVTV 247
           Q I VDGG T+
Sbjct: 238 QDIVVDGGSTL 248

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score =  211 bits (539), Expect = 2e-68
 Identities = 79/253 (31%), Positives = 112/253 (44%), Gaps = 14/253 (5%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            ALV+GG RG+G + V  +   GA V        E  A   E             D++  
Sbjct: 9   VALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL---ADAARYVHLDVTQP 65

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
            Q +  ++T  + F G L++L+NNA I  +    D    +   +   N   VF   +   
Sbjct: 66  AQWKAAVDTAVTAF-GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVV 124

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
              K +G GSI+ ISS+ G+ G  +   Y A K A+  LTK+ A E     IR N++ P 
Sbjct: 125 KPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPG 184

Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
           ++KT M     E             QT +GRA EP EVS+LV +L    +SY TG    V
Sbjct: 185 LVKTPMTDWVPED----------IFQTALGRAAEPVEVSNLVVYLASDESSYSTGAEFVV 234

Query: 242 DGGVTVTVNVNGL 254
           DGG    +  N  
Sbjct: 235 DGGTVAGLAHNDF 247

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score =  210 bits (537), Expect = 3e-68
 Identities = 72/247 (29%), Positives = 104/247 (42%), Gaps = 7/247 (2%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            ALVTGG  G+G   V+ L   GA V     N+        E    G +      D+SS 
Sbjct: 8   VALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRHDVSSE 64

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
                ++  V     G LN+L+NNA I           ED S +   N ESVF   Q   
Sbjct: 65  ADWTLVMAAVQRRL-GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGI 123

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDN--IRTNTVA 179
              K +G GSI+ ++SV     I   + Y A K A++ LT+  A    K    IR N++ 
Sbjct: 124 AAMKETG-GSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIH 182

Query: 180 PWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
           P  I T M++         E +    +    GRA  P+ ++ LV FL    +S ++G  +
Sbjct: 183 PDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVMSGSEL 242

Query: 240 CVDGGVT 246
             D  + 
Sbjct: 243 HADNSIL 249

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score =  211 bits (539), Expect = 3e-68
 Identities = 70/257 (27%), Positives = 103/257 (40%), Gaps = 17/257 (6%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            AL+TGG  G+G A V+     GA V    ++   L          G    G V D+ S 
Sbjct: 7   VALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVA---HGGNAVGVVGDVRSL 63

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMST-----VSSTNFESVFHL 116
           + +++  E   + F GK++ LI NA I      +    ED        +   N +   H 
Sbjct: 64  QDQKRAAERCLAAF-GKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHA 122

Query: 117 SQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTN 176
            +   P   +S  GS+VF  S  G        LY A K A+  L + +A E A  ++R N
Sbjct: 123 VKACLPALVSSR-GSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELAP-HVRVN 180

Query: 177 TVAPWVIKTSMIKPF-----EEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAA 231
            VAP  + T +  P      E+        D +    PIGR    +E +    F      
Sbjct: 181 GVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAYVFFATRGD 240

Query: 232 S-YITGQIICVDGGVTV 247
           S   TG ++  DGG+ V
Sbjct: 241 SLPATGALLNYDGGMGV 257

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score =  209 bits (535), Expect = 5e-68
 Identities = 73/245 (29%), Positives = 111/245 (45%), Gaps = 6/245 (2%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            A++TGG  GIG A  E  A  GA +                 +N G +V    CD+S  
Sbjct: 9   LAVITGGANGIGRAIAERFAVEGADIAIADLV--PAPEAEAAIRNLGRRVLTVKCDVSQP 66

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
              E   + V S F G+ +IL+NNA I  + P  ++T E        N +S F +++   
Sbjct: 67  GDVEAFGKQVISTF-GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFV 125

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P  K +G G I+ ++S      I + + Y + K A    T+ LA +  KD I  N +AP 
Sbjct: 126 PGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPS 185

Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
           +++T+     E     + F         I R   P +++   AFL    AS+ITGQ + V
Sbjct: 186 LVRTATT---EASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDASFITGQTLAV 242

Query: 242 DGGVT 246
           DGG+ 
Sbjct: 243 DGGMV 247

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score =  210 bits (536), Expect = 6e-68
 Identities = 77/246 (31%), Positives = 113/246 (45%), Gaps = 8/246 (3%)

Query: 2   TALVTGGT-RGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF-KVTGSVCDLS 59
             LVT     GIG  T       GA V     ++  L     +  + G  +V   VCD++
Sbjct: 24  VVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVT 83

Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
           S E  + LI        G+L++L+NNA +    P VD+T E+   V +    SV   ++ 
Sbjct: 84  STEAVDALITQTVEKA-GRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRA 142

Query: 120 AHPLF-KASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
           A   F      G IV  +SV G R   S S Y A K  +  LT+  A E  +  +R N V
Sbjct: 143 ALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAV 202

Query: 179 APWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI 238
           +P + +   +    E    SE LD +A     GRA EP EV++ +AFL    +SY+TG++
Sbjct: 203 SPSIARHKFL----EKTSSSELLDRLASDEAFGRAAEPWEVAATIAFLASDYSSYMTGEV 258

Query: 239 ICVDGG 244
           + V   
Sbjct: 259 VSVSSQ 264

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score =  207 bits (528), Expect = 7e-67
 Identities = 69/254 (27%), Positives = 106/254 (41%), Gaps = 10/254 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE--WKNKGFKVTGSVCDLS 59
            A+VTG T GIG      LA  GA +            ++        G KV     DLS
Sbjct: 6   VAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLS 65

Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
             E    L++       G+++IL+NNA I       D   E    + + N  +VFH +  
Sbjct: 66  KGEAVRGLVDNAVRQM-GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAA 124

Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
           A P  K  G G I+ I+S  G+    + S Y A K  +   TK  A E A   I  N + 
Sbjct: 125 ALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAIC 184

Query: 180 PWVIKTSMIKP-------FEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAAS 232
           P  ++T +++             + +   + ++ + P  +   P+++     FL   AA+
Sbjct: 185 PGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLASDAAA 244

Query: 233 YITGQIICVDGGVT 246
            ITG  + VDGG T
Sbjct: 245 QITGTTVSVDGGWT 258

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score =  207 bits (529), Expect = 9e-67
 Identities = 79/251 (31%), Positives = 118/251 (47%), Gaps = 9/251 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           TA VTG + GIG A    LA  G  V+ C+R+   + A +   +  G  V GS CD++S 
Sbjct: 26  TAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTST 85

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           ++    +      F G + IL+N+A       T D+     + V  TN   VF +++   
Sbjct: 86  DEVHAAVAAAVERF-GPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVL 144

Query: 122 PLFK--ASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
                  +G G IV I+S GG +G+   + Y A K  +   TK++  E AK  I  N V 
Sbjct: 145 RAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVC 204

Query: 180 PWVIKTSMIKPFEEGPEGS------EFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASY 233
           P  ++T M +   EG          E  +    + P+GR   P+EV+ LV +L   AA+ 
Sbjct: 205 PGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAGLVGYLVTDAAAS 264

Query: 234 ITGQIICVDGG 244
           IT Q + V GG
Sbjct: 265 ITAQALNVCGG 275

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score =  204 bits (521), Expect = 1e-65
 Identities = 64/251 (25%), Positives = 103/251 (41%), Gaps = 13/251 (5%)

Query: 2   TALVTG--GTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHE-WKNKGFKVTGSVCD 57
             +VTG  G +G+G       A  GA +  T +      +  + E  K  G K     C 
Sbjct: 22  VVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQ 81

Query: 58  LSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLS 117
           + S E  EKL++ V + F G+++  I NA        +D + E  + V   +    FH +
Sbjct: 82  VDSYESCEKLVKDVVADF-GQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCA 140

Query: 118 QLAHPLFKASGNGSIVFISSVGGVRG--IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
           +     FK  G GS+V  +S+ G         + Y   K     + ++LA EW     R 
Sbjct: 141 KAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARSLANEWRD-FARV 199

Query: 176 NTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT 235
           N+++P  I T +     +     E         P+GR G   E+     +    A++Y T
Sbjct: 200 NSISPGYIDTGLSDFVPK-----ETQQLWHSMIPMGRDGLAKELKGAYVYFASDASTYTT 254

Query: 236 GQIICVDGGVT 246
           G  + +DGG T
Sbjct: 255 GADLLIDGGYT 265

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score =  203 bits (519), Expect = 2e-65
 Identities = 60/273 (21%), Positives = 99/273 (36%), Gaps = 54/273 (19%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             +++G   GIG AT + L   G  +        E+                 + DLS+ 
Sbjct: 3   IIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV-----------------IADLSTA 45

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           E R++ I  V +     ++ L+  A +           + +  V S N+     L     
Sbjct: 46  EGRKQAIADVLAKCSKGMDGLVLCAGLG-------PQTKVLGNVVSVNYFGATELMDAFL 98

Query: 122 PLFKASGNGSIVFI----------------------------SSVGGVRGIPSVSLYGAY 153
           P  K     + V I                            + V           Y   
Sbjct: 99  PALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGS 158

Query: 154 KGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRA 213
           K A+    +  A  W +  +R NT+AP   +T +++   + P   E +       P+GR 
Sbjct: 159 KNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIA--KFVPPMGRR 216

Query: 214 GEPDEVSSLVAFLCLPAASYITGQIICVDGGVT 246
            EP E++S++AFL  PAASY+ G  I +DGG+ 
Sbjct: 217 AEPSEMASVIAFLMSPAASYVHGAQIVIDGGID 249

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score =  203 bits (518), Expect = 2e-65
 Identities = 72/254 (28%), Positives = 115/254 (45%), Gaps = 15/254 (5%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE-LDARLHEWKNKGFKVTGSVCDLSS 60
             L+TG ++GIG AT    AR GA V    R     +D  +   +  G        DL++
Sbjct: 9   RVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLAT 68

Query: 61  REQREKLIETVTSIFQGKLNILINNA-AIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
            E  ++L++   + F G +++LINNA  +   KP  +I       V   N  SV   ++ 
Sbjct: 69  SEACQQLVDEFVAKF-GGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKF 127

Query: 120 AHPLFKASGN-----GSIVFISSVGGVRG-IPSVSLYGAYKGAMNQLTKNLACEWAKDNI 173
           A P   A+        +++   S+ G  G  P   LYGA K  ++ + KN      KD +
Sbjct: 128 ALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKNWVDFHTKDGV 187

Query: 174 RTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAAS- 232
           R N V+P  + T+      +     +  D I+   P+GR G  +E++    F     AS 
Sbjct: 188 RFNIVSPGTVDTAFHADKTQ-----DVRDRISNGIPMGRFGTAEEMAPAFLFFASHLASG 242

Query: 233 YITGQIICVDGGVT 246
           YITGQ++ ++GG  
Sbjct: 243 YITGQVLDINGGQY 256

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score =  203 bits (519), Expect = 3e-65
 Identities = 65/264 (24%), Positives = 107/264 (40%), Gaps = 20/264 (7%)

Query: 2   TALVTGGTRGIGHATVEELARFGA-------------IVHTCSRNQIELDARLHEWKNKG 48
            A +TG  RG G A    +A  GA              V     +  +L   +   +   
Sbjct: 13  VAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAAN 72

Query: 49  FKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSST 108
            ++  +V D    ++  K+++   +   G+L+I++ NA +A  +   DIT ED   V   
Sbjct: 73  RRIVAAVVDTRDFDRLRKVVDDGVAAL-GRLDIIVANAGVAAPQAWDDITPEDFRDVMDI 131

Query: 109 NFESVFHLSQLAHPLFKASGN-GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACE 167
           N    ++      P     G  GSI+ ISS  G++  P +  Y A K A+  L +  A E
Sbjct: 132 NVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAVTGLARAFAAE 191

Query: 168 WAKDNIRTNTVAPWVIKTSMIKP-----FEEGPEGSEFLDGIARQTPIGRAGEPDEVSSL 222
             K +IR N+V P  + T M          +  E +  L  +          EP++++  
Sbjct: 192 LGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPDWVAEPEDIADT 251

Query: 223 VAFLCLPAASYITGQIICVDGGVT 246
           V +L    +  +T   I VD G T
Sbjct: 252 VCWLASDESRKVTAAQIPVDQGST 275

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score =  202 bits (515), Expect = 6e-65
 Identities = 62/253 (24%), Positives = 105/253 (41%), Gaps = 17/253 (6%)

Query: 2   TALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDL 58
             LVTG +RGIG + V+ L       +V+  +R++    A L + K K G +    V D+
Sbjct: 4   VILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSE----APLKKLKEKYGDRFFYVVGDI 59

Query: 59  SSREQREKLIETVTSIFQGKLNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLS 117
           +     ++L+        GK++ L+ NA +   V+   +I       +   NF S+  L 
Sbjct: 60  TEDSVLKQLVNAAVKGH-GKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLV 118

Query: 118 QLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
            +A P  K +  G++VF+SS        S   YG+ K A+N     LA E  +  ++   
Sbjct: 119 GIALPELKKTN-GNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANE--ERQVKAIA 175

Query: 178 VAPWVIKTSMIKPFEEGPEGS----EFLDGIARQTPIGRAGEPDEVSSLVAFLCL-PAAS 232
           VAP ++ T M     E    S    E L          +  +    +++ A L L     
Sbjct: 176 VAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYAKLALHGIPD 235

Query: 233 YITGQIICVDGGV 245
            + GQ +  +   
Sbjct: 236 GVNGQYLSYNDPA 248

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score =  202 bits (516), Expect = 7e-65
 Identities = 81/251 (32%), Positives = 115/251 (45%), Gaps = 9/251 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            ALVTG T GIG      L + G  V  C+R +  L   L E +  G +  G  CD+ S 
Sbjct: 24  VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSV 83

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
            + E L+  V   + G +++L+NNA       T ++  E    V  TN   VF +++   
Sbjct: 84  PEIEALVAAVVERY-GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVL 142

Query: 122 PLFK--ASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
                   G G IV I+S GG +G+   + Y A K  +   TK L  E A+  I  N V 
Sbjct: 143 KAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVC 202

Query: 180 PWVIKTSMIKPFEEGPEGS------EFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASY 233
           P  ++T M     E           E  D I  + PIGR  +P EV+ +VA+L  P A+ 
Sbjct: 203 PGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAAA 262

Query: 234 ITGQIICVDGG 244
           +T Q + V GG
Sbjct: 263 VTAQALNVCGG 273

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score =  202 bits (516), Expect = 1e-64
 Identities = 61/250 (24%), Positives = 105/250 (42%), Gaps = 5/250 (2%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            A++TGG  GIG  T +   R+GA V              +   +    ++   CD++  
Sbjct: 18  VAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD-VISFVHCDVTKD 76

Query: 62  EQREKLIETVTSIFQGKLNILINNAAI--AFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
           E    L++T  +   GKL+I+  N  +        ++   ED   V   N    F +++ 
Sbjct: 77  EDVRNLVDTTIAKH-GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKH 135

Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSL-YGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
           A  +   +  GSIVF +S+        VS  Y A K A+  LT +L  E  +  IR N V
Sbjct: 136 AARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCV 195

Query: 179 APWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI 238
           +P+++ + ++                      G     ++V+  VA+L    + Y++G  
Sbjct: 196 SPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKYVSGLN 255

Query: 239 ICVDGGVTVT 248
           + +DGG T T
Sbjct: 256 LVIDGGYTRT 265

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score =  201 bits (514), Expect = 1e-64
 Identities = 64/245 (26%), Positives = 107/245 (43%), Gaps = 8/245 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
            A+VTG +RGIG A    LA  G  +V   +      +    + +  G K   +  D+S 
Sbjct: 29  VAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSD 88

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
                +L  T    F G +++L+NNA I  +    +        V + N +  F+  + A
Sbjct: 89  PAAVRRLFATAEEAF-GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREA 147

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
               +  G   I+ +S+       PS  +Y A K  +  +T  L+ E    +I  N VAP
Sbjct: 148 AQRLRVGG--RIINMSTSQVGLLHPSYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAP 205

Query: 181 WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
               T +    E   +  E  D  A+  P+ R G P +++  VAFL  P  +++ GQ++ 
Sbjct: 206 GPTATDLF--LEGKSD--EVRDRFAKLAPLERLGTPQDIAGAVAFLAGPDGAWVNGQVLR 261

Query: 241 VDGGV 245
            +GG+
Sbjct: 262 ANGGI 266

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  200 bits (511), Expect = 2e-64
 Identities = 56/249 (22%), Positives = 94/249 (37%), Gaps = 19/249 (7%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSV---CDL 58
             LVTG + GIG       AR+GA V    RN+ +L         +  +           
Sbjct: 14  IILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLT 73

Query: 59  SSREQREKLIETVTSIFQGKLNILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLS 117
            + E  ++L + +   +  +L+ +++NA +   V P  +   +    V   N  + F L+
Sbjct: 74  CTSENCQQLAQRIAVNY-PRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLT 132

Query: 118 QLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
           Q   PL   S  GS+VF SS  G +G  +   Y A K A   + + LA E+ +  +R N 
Sbjct: 133 QALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQ-RLRVNC 191

Query: 178 VAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ 237
           + P   +T+M                        +   P ++  L  +L    +   TG 
Sbjct: 192 INPGGTRTAMRASAFPTE-------------DPQKLKTPADIMPLYLWLMGDDSRRKTGM 238

Query: 238 IICVDGGVT 246
                 G  
Sbjct: 239 TFDAQPGRK 247

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score =  200 bits (511), Expect = 3e-64
 Identities = 70/249 (28%), Positives = 108/249 (43%), Gaps = 11/249 (4%)

Query: 2   TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
            ALVTG +RGIG A  + LA  GA +       + E +  ++E ++ G        +L S
Sbjct: 9   VALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLES 68

Query: 61  REQREKLIETVTSIFQ-----GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFH 115
               E L  ++ +  Q      K +ILINNA I       + T +    + S N ++ F 
Sbjct: 69  LHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFF 128

Query: 116 LSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
           + Q A    + +    I+ ISS      +P    Y   KGA+N +T  LA +     I  
Sbjct: 129 IIQQALSRLRDNS--RIINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLGARGITV 186

Query: 176 NTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT 235
           N + P  +KT M     E              +   R GE ++++   AFL  P + ++T
Sbjct: 187 NAILPGFVKTDM---NAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDSRWVT 243

Query: 236 GQIICVDGG 244
           GQ+I V GG
Sbjct: 244 GQLIDVSGG 252

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score =  200 bits (511), Expect = 3e-64
 Identities = 55/249 (22%), Positives = 100/249 (40%), Gaps = 11/249 (4%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIV---HTCSRNQIELDARLHEWKNKGFKVTGSVCDL 58
             ++ GG + +G  T +  A     +   +  +++    +    E +++G KV     DL
Sbjct: 13  VIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDL 72

Query: 59  SSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQ 118
           S+ E+  KL +     F GK++I IN       KP V+ +  +   + + N +  +   +
Sbjct: 73  SNEEEVAKLFDFAEKEF-GKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIK 131

Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
            A        NG I+ I++          S Y   K  +   T+  + E  K  I  N +
Sbjct: 132 QAAKHMNP--NGHIITIATSLLAAYTGFYSTYAGNKAPVEHYTRAASKELMKQQISVNAI 189

Query: 179 APWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI 238
           AP  + TS       G E  E       Q    +  + ++++ ++ FL      +I GQ 
Sbjct: 190 APGPMDTSFF----YGQETKESTAFHKSQAMGNQLTKIEDIAPIIKFLT-TDGWWINGQT 244

Query: 239 ICVDGGVTV 247
           I  +GG T 
Sbjct: 245 IFANGGYTT 253

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score =  200 bits (510), Expect = 5e-64
 Identities = 81/245 (33%), Positives = 115/245 (46%), Gaps = 8/245 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSS 60
           + +VTGGT+GIG       AR GA V    R+  ++DA + +       KV G   D+S 
Sbjct: 12  SVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSD 71

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
           R Q + L       F G ++++  NA +    P   +T E ++ + + N    F+  Q  
Sbjct: 72  RAQCDALAGRAVEEF-GGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQAC 130

Query: 121 HPLFKASGNGSIVFISSV-GGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
                ASG+G +V  SS+ G + G P  S YGA K A     +  A E A   I  N + 
Sbjct: 131 LDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIM 190

Query: 180 PWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
           P  I T  +    E     E++  +AR  P G  G P+++  L AFL    A YITGQ I
Sbjct: 191 PGNIMTEGLLENGE-----EYIASMARSIPAGALGTPEDIGHLAAFLATKEAGYITGQAI 245

Query: 240 CVDGG 244
            VDGG
Sbjct: 246 AVDGG 250

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score =  199 bits (508), Expect = 1e-63
 Identities = 75/247 (30%), Positives = 106/247 (42%), Gaps = 11/247 (4%)

Query: 2   TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
           TA VTGG+RGIG A  + LA  GA +  T         A + E +  G +      D   
Sbjct: 33  TAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRD 92

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
            E  E+ I        G L+IL+N+A I    P  + T  D   V + NF + F   + A
Sbjct: 93  AEAIEQAIRETVEAL-GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSA 151

Query: 121 HPLFKASGNGSIVFISS-VGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
                  G   I+ I S +  +   P +SLY A K A+  LTK LA +     I  N V 
Sbjct: 152 SRHLGDGG--RIITIGSNLAELVPWPGISLYSASKAALAGLTKGLARDLGPRGITVNIVH 209

Query: 180 PWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
           P    T M       P   +  +    +   G  GEP +++ LVA+L  P   ++TG  +
Sbjct: 210 PGSTDTDMN------PADGDHAEAQRERIATGSYGEPQDIAGLVAWLAGPQGKFVTGASL 263

Query: 240 CVDGGVT 246
            +DGG  
Sbjct: 264 TIDGGAN 270

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score =  198 bits (505), Expect = 2e-63
 Identities = 62/265 (23%), Positives = 97/265 (36%), Gaps = 40/265 (15%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
              +TG   GIG A  E LAR G  V    R Q +++A                 DLS+ 
Sbjct: 3   VIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA-----------------DLSTP 45

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDI--------------------TAED 101
             RE  +  V     G L+ L+  A +        +                    +   
Sbjct: 46  GGRETAVAAVLDRCGGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQ 105

Query: 102 MSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLT 161
                     +         P+ +A   G       +   +G   ++ Y   K A+  L 
Sbjct: 106 QPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQTHLA-YAGSKYAVTCLA 164

Query: 162 KNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSS 221
           +    +WA   +R N VAP  ++T +++  +  P   E         P+GR  EP EV+ 
Sbjct: 165 RRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYGE--STRRFVAPLGRGSEPREVAE 222

Query: 222 LVAFLCLPAASYITGQIICVDGGVT 246
            +AFL  P AS+I G ++ VDGG+ 
Sbjct: 223 AIAFLLGPQASFIHGSVLFVDGGMD 247

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score =  198 bits (505), Expect = 2e-63
 Identities = 69/246 (28%), Positives = 112/246 (45%), Gaps = 12/246 (4%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           T LVTG   GIG A ++  AR GA +    R +  L   +        +    V D+S  
Sbjct: 8   TILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAA---LEAEAIAVVADVSDP 64

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           +  E +       F G+L+ + + A +A    + ++  E    V   N    F +++ A 
Sbjct: 65  KAVEAVFAEALEEF-GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAG 123

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
            + +    GS+V   SV G+ G   ++ Y A K  +  L + LA E A+  +R N + P 
Sbjct: 124 EVLE--EGGSLVLTGSVAGL-GAFGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPG 180

Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
           +I+T M              +     +P+GRAG P+EV+    FL    ++YITGQ + V
Sbjct: 181 LIQTPMTAGLPP-----WAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQALYV 235

Query: 242 DGGVTV 247
           DGG ++
Sbjct: 236 DGGRSI 241

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score =  197 bits (504), Expect = 6e-63
 Identities = 66/252 (26%), Positives = 109/252 (43%), Gaps = 11/252 (4%)

Query: 2   TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
            A+VTGG RGIG      LA  G  I  T   +   +   + E    G +V     DL+ 
Sbjct: 31  VAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLAD 90

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVK--PTVDITAEDMSTVSSTNFESVFHLSQ 118
               +  ++ V + F G+++ L+NNA IA +     +D+  E+  T+   N       +Q
Sbjct: 91  LSSHQATVDAVVAEF-GRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQ 149

Query: 119 LAHPLF---KASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
                     A  + SI+ I+SV  V   P    Y   K  +   ++ LA   A+  I  
Sbjct: 150 AVLKAMLASDARASRSIINITSVSAVMTSPERLDYCMSKAGLAAFSQGLALRLAETGIAV 209

Query: 176 NTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT 235
             V P +I++ M        +G       +   P+ R GEP+++ ++VA L      + T
Sbjct: 210 FEVRPGIIRSDMTAAVSGKYDGLI----ESGLVPMRRWGEPEDIGNIVAGLAGGQFGFAT 265

Query: 236 GQIICVDGGVTV 247
           G +I  DGG+++
Sbjct: 266 GSVIQADGGLSI 277

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score =  196 bits (501), Expect = 2e-62
 Identities = 66/253 (26%), Positives = 109/253 (43%), Gaps = 13/253 (5%)

Query: 2   TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
            AL TG  RGIG     EL R GA +V     +    +  + E K  G +      D+S 
Sbjct: 23  VALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISK 82

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
             +   L +   S F G L+ +++N+ +      +++T E    V + N    F ++Q  
Sbjct: 83  PSEVVALFDKAVSHF-GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQG 141

Query: 121 HPLFKASGNGSIVFISSVGGVR-GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
               +  G   I+  SS+  V  GIP+ +LY   K A+    +  A +     +  N +A
Sbjct: 142 LKHCRRGG--RIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIA 199

Query: 180 PWVIKTSM--------IKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAA 231
           P  +KT M             +G    +  +G+A   P+ R G P ++   V+ LC   +
Sbjct: 200 PGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSALCQEES 259

Query: 232 SYITGQIICVDGG 244
            +I GQ+I + GG
Sbjct: 260 EWINGQVIKLTGG 272

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score =  195 bits (499), Expect = 2e-62
 Identities = 45/243 (18%), Positives = 93/243 (38%), Gaps = 17/243 (6%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             L+TG ++ +G      L   G  V    R +      L     +         D S  
Sbjct: 29  PILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTEL-----RQAGAVALYGDFSCE 83

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
                 I+ + +     L  +++NA+  ++  T    A++ + + S +  + + ++    
Sbjct: 84  TGIMAFIDLLKTQT-SSLRAVVHNASE-WLAETPGEEADNFTRMFSVHMLAPYLINLHCE 141

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           PL  AS    IV IS     +G      Y A K  +  LT + A  +A   ++ N +AP 
Sbjct: 142 PLLTASEVADIVHISDDVTRKGSSKHIAYCATKAGLESLTLSFAARFA-PLVKVNGIAPA 200

Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
           ++            + + +      ++ +G     + +   + +L    ++Y+TG  + V
Sbjct: 201 LLMFQP-------KDDAAYRANALAKSALGIEPGAEVIYQSLRYLL--DSTYVTGTTLTV 251

Query: 242 DGG 244
           +GG
Sbjct: 252 NGG 254

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score =  195 bits (498), Expect = 6e-62
 Identities = 83/245 (33%), Positives = 109/245 (44%), Gaps = 8/245 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSS 60
           + LVTGGT+GIG       AR GA V   +R+  EL +   E        V G   D+S 
Sbjct: 43  SVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSD 102

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
                    TV   F G L+++  NA I        +T E +S V   N +   +  Q  
Sbjct: 103 PGSCADAARTVVDAF-GALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQAC 161

Query: 121 HPLFKASGNGSIVFISSV-GGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
                ASG G ++  SS+ G V G P  S YGA K A     +  A E A   +  N + 
Sbjct: 162 LAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAIL 221

Query: 180 PWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
           P  I T  +    E     E++ G+AR  P+G  G P ++  L AFL    A YITGQ I
Sbjct: 222 PGNILTEGLVDMGE-----EYISGMARSIPMGMLGSPVDIGHLAAFLATDEAGYITGQAI 276

Query: 240 CVDGG 244
            VDGG
Sbjct: 277 VVDGG 281

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score =  195 bits (497), Expect = 7e-62
 Identities = 68/265 (25%), Positives = 106/265 (40%), Gaps = 23/265 (8%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIV-------------HTCSRNQIELDARLHEWKNKG 48
            A +TG  RG G +    LA  GA +                  +  +LD      +++G
Sbjct: 17  VAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQG 76

Query: 49  FKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSST 108
            K    V D+       +L+      F G+L++++ NA +       ++T E   TV   
Sbjct: 77  RKALTRVLDVRDDAALRELVADGMEQF-GRLDVVVANAGVLSWGRVWELTDEQWDTVIGV 135

Query: 109 NFESVFHLSQLAHPLFKASGN-GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACE 167
           N    +   +   P    +GN GSIV +SS  G++  P    Y A K  +  LT  LA E
Sbjct: 136 NLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTALTNTLAIE 195

Query: 168 WAKDNIRTNTVAPWVIKTSMIKP------FEEGPEGSEFLDGIARQTPIGRAGEPDEVSS 221
             +  IR N++ P+ ++T MI+P      F   P                     DEV+ 
Sbjct: 196 LGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVH--SFPPMPVQPNGFMTADEVAD 253

Query: 222 LVAFLCLPAASYITGQIICVDGGVT 246
           +VA+L    +  +TG  I VD G  
Sbjct: 254 VVAWLAGDGSGTLTGTQIPVDKGAL 278

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score =  193 bits (494), Expect = 1e-61
 Identities = 67/252 (26%), Positives = 107/252 (42%), Gaps = 12/252 (4%)

Query: 2   TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
            ALVTG  RGIG A    L R GA +V   + +  + +  + E K  G        D+  
Sbjct: 20  VALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQ 79

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
             +  KL +   + F G L+I ++N+ +       D+T E+   V S N    F +++ A
Sbjct: 80  VPEIVKLFDQAVAHF-GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREA 138

Query: 121 HPLFKASGNGSIVFISS-VGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
           +      G   IV  SS       +P  SLY   KGA++   +  + +     I  N VA
Sbjct: 139 YRHLTEGG--RIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVA 196

Query: 180 PWVIKTSM-------IKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAAS 232
           P    T M         P        +     A  +P+ R G P +V+++V FL      
Sbjct: 197 PGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVVGFLVSKEGE 256

Query: 233 YITGQIICVDGG 244
           ++ G+++ +DGG
Sbjct: 257 WVNGKVLTLDGG 268

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score =  193 bits (493), Expect = 2e-61
 Identities = 71/249 (28%), Positives = 106/249 (42%), Gaps = 11/249 (4%)

Query: 2   TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
           T +V G  R IG A     A+ GA +V T +         + E +  G        DL++
Sbjct: 10  TIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTN 69

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFV-KPTVDITAEDMSTVSSTNFESVFHLSQL 119
             + E  I      F G+++ L++ A      K   ++       V   N  S+F  ++ 
Sbjct: 70  AAEVEAAISAAADKF-GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKT 128

Query: 120 AHPLFKASGNGSIVFISSVGGVRG-IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
           A P     G  +IV  SS  G  G  P    Y   KGA+   T+ LA E     IR N V
Sbjct: 129 ALPKMAKGG--AIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEVGP-KIRVNAV 185

Query: 179 APWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI 238
            P +I T+    F +     E  + +A  T + R G  ++V+ LVAFL    A+Y+TG  
Sbjct: 186 CPGMISTTFHDTFTK----PEVRERVAGATSLKREGSSEDVAGLVAFLASDDAAYVTGAC 241

Query: 239 ICVDGGVTV 247
             ++GGV  
Sbjct: 242 YDINGGVLF 250

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  192 bits (490), Expect = 3e-61
 Identities = 65/243 (26%), Positives = 101/243 (41%), Gaps = 19/243 (7%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSV---CDL 58
             LVTG  RGIG A     A  GA V    R +  L     + K+ G      +    + 
Sbjct: 16  VILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLEN 75

Query: 59  SSREQREKLIETVTSIFQGKLNILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLS 117
           ++ +Q  +L   V   F G+L+ L++NA+I     P   +  ED   V   N  + F L+
Sbjct: 76  ATAQQYRELAARVEHEF-GRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLT 134

Query: 118 QLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEW-AKDNIRTN 176
           +   PL K S + SI F SS  G +G  +   YG  K A   L + LA E      +R N
Sbjct: 135 RALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVSKFATEGLMQTLADELEGVTAVRAN 194

Query: 177 TVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG 236
           ++ P   +T M                   + P+     P+++  +  +L  P ++ I G
Sbjct: 195 SINPGATRTGMRA------------QAYPDENPLNN-PAPEDIMPVYLYLMGPDSTGING 241

Query: 237 QII 239
           Q +
Sbjct: 242 QAL 244

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score =  193 bits (492), Expect = 3e-61
 Identities = 50/253 (19%), Positives = 88/253 (34%), Gaps = 25/253 (9%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIV-------HTCSRNQIELDARLHEWKNKGFKVTGS 54
           T  +TG +RGIG A     AR GA V           +    + +        G +    
Sbjct: 8   TLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLAL 67

Query: 55  VCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVF 114
            CD+   +Q    +      F G ++IL+NNA+  +++ T+D   +    +   N    F
Sbjct: 68  KCDIREEDQVRAAVAATVDTF-GGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSF 126

Query: 115 HLSQLAHPLFKASGNGSIVFISSVGGVRG--IPSVSLYGAYKGAMNQLTKNLACEWAKDN 172
             +Q   P    + N  I+ ++    +      + + Y   K  M+ +T  LA E+    
Sbjct: 127 VCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVTLGLAAEFGPQG 186

Query: 173 IRTNTVAP-WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAA 231
           +  N + P  VI T  I                           P+ ++     +    A
Sbjct: 187 VAINALWPRTVIATDAINMLPGVDA--------------AACRRPEIMADAAHAVLTREA 232

Query: 232 SYITGQIICVDGG 244
           +   GQ +  D  
Sbjct: 233 AGFHGQFLIDDEV 245

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score =  192 bits (489), Expect = 1e-60
 Identities = 78/250 (31%), Positives = 124/250 (49%), Gaps = 16/250 (6%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            ALVTG  RGIG    + LA+  + V   SR Q   D+ + E K+ G++ +G   D+S +
Sbjct: 46  VALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKK 105

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD-----ITAEDMSTVSSTNFESVFHL 116
           E+  ++I  + +     ++IL+NNA I     T D     +  ++   V  TN  S+F++
Sbjct: 106 EEISEVINKILTEH-KNVDILVNNAGI-----TRDNLFLRMKNDEWEDVLRTNLNSLFYI 159

Query: 117 SQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTN 176
           +Q        +  G I+ ISS+ G+ G    + Y + K  +   TK+LA E A  NI  N
Sbjct: 160 TQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITVN 219

Query: 177 TVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG 236
            +AP  I + M     E     +    I    P GR G P+EV++L  FL    + YI G
Sbjct: 220 AIAPGFISSDMTDKISE-----QIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGYING 274

Query: 237 QIICVDGGVT 246
           ++  +DGG++
Sbjct: 275 RVFVIDGGLS 284

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score =  190 bits (486), Expect = 1e-60
 Identities = 68/244 (27%), Positives = 107/244 (43%), Gaps = 9/244 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           TALVTG  +GIG A    LA  GA V     N     A        G K      D+S  
Sbjct: 8   TALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI---GKKARAIAADISDP 64

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
              + L   + ++  G ++IL+NNA+I       D+  +    +   N    F +++   
Sbjct: 65  GSVKALFAEIQALT-GGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGT 123

Query: 122 PLF-KASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
                A   G ++ I+S     G P+++ Y A KG +   T+ LA E  K NI  N V P
Sbjct: 124 DQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELGKYNITANAVTP 183

Query: 181 WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
            +I++  +K        +E    +     +   G+P+ ++ +V+FL    A +ITGQ + 
Sbjct: 184 GLIESDGVKASPH----NEAFGFVEMLQAMKGKGQPEHIADVVSFLASDDARWITGQTLN 239

Query: 241 VDGG 244
           VD G
Sbjct: 240 VDAG 243

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score =  192 bits (489), Expect = 1e-60
 Identities = 65/255 (25%), Positives = 111/255 (43%), Gaps = 13/255 (5%)

Query: 2   TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
            ALVTG  RGIG     EL R G  ++   + +    +  +   K  G        ++  
Sbjct: 31  VALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGV 90

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
            E   ++ E    IF GKL+I+ +N+ +       D+T E+   V + N    F +++ A
Sbjct: 91  VEDIVRMFEEAVKIF-GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREA 149

Query: 121 HPLFKASGNGSIVFISS-VGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
           +   +  G   ++ + S  G  + +P  ++Y   KGA+    + +A + A   I  N VA
Sbjct: 150 YKHLEIGG--RLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVA 207

Query: 180 PWVIKTSM--------IKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAA 231
           P  IKT M        I   E             + +P+ R G P +++ +V FL     
Sbjct: 208 PGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLASNDG 267

Query: 232 SYITGQIICVDGGVT 246
            ++TG++I +DGG  
Sbjct: 268 GWVTGKVIGIDGGAC 282

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score =  189 bits (484), Expect = 3e-60
 Identities = 82/249 (32%), Positives = 129/249 (51%), Gaps = 17/249 (6%)

Query: 2   TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
           TA+VTG +RG+G A   +L   GA IV   S     LDA   E+K  G  V  +  D+ +
Sbjct: 7   TAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKN 66

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD-----ITAEDMSTVSSTNFESVFH 115
            E  E +++T    F G+++IL+NNA I     T D     ++ +D   V +TN +S + 
Sbjct: 67  PEDVENMVKTAMDAF-GRIDILVNNAGI-----TRDTLMLKMSEKDWDDVLNTNLKSAYL 120

Query: 116 LSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
            ++    +     +G I+ I+S+ G+ G    + Y A K  +   TK++A E+A   I  
Sbjct: 121 CTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAKEFAAKGIYC 180

Query: 176 NTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT 235
           N VAP +IKT M     +     +  +      P+ R G P+EV+++V FL    ++YIT
Sbjct: 181 NAVAPGIIKTDMTDVLPD-----KVKEMYLNNIPLKRFGTPEEVANVVGFLASDDSNYIT 235

Query: 236 GQIICVDGG 244
           GQ+I +DGG
Sbjct: 236 GQVINIDGG 244

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score =  190 bits (484), Expect = 4e-60
 Identities = 75/249 (30%), Positives = 117/249 (46%), Gaps = 17/249 (6%)

Query: 2   TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
            A VTGG  GIG +  + L + G  +V  C  N       L + K  GF    S  ++  
Sbjct: 15  IAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGD 74

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD-----ITAEDMSTVSSTNFESVFH 115
            +  ++  + V +   G++++L+NNA I     T D     +T ED   V  TN  S+F+
Sbjct: 75  WDSTKQAFDKVKAEV-GEIDVLVNNAGI-----TRDVVFRKMTREDWQAVIDTNLTSLFN 128

Query: 116 LSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
           +++         G G I+ ISSV G +G    + Y   K  ++  T +LA E A   +  
Sbjct: 129 VTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTV 188

Query: 176 NTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT 235
           NTV+P  I T M+K         + L+ I    P+ R G PDE+ S+VA+L    + + T
Sbjct: 189 NTVSPGYIGTDMVKAIRP-----DVLEKIVATIPVRRLGSPDEIGSIVAWLASEESGFST 243

Query: 236 GQIICVDGG 244
           G    ++GG
Sbjct: 244 GADFSLNGG 252

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score =  190 bits (485), Expect = 4e-60
 Identities = 58/248 (23%), Positives = 95/248 (38%), Gaps = 12/248 (4%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSS 60
            ALVTGG  G+G    + L+  G  V    R    LDA   E   + G  V   VCD+  
Sbjct: 35  IALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGD 94

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQL 119
            +Q   L   V + F  +L++L+NNA       P  ++T E  + + + N    F  +Q 
Sbjct: 95  PDQVAALFAAVRAEF-ARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQH 153

Query: 120 AHPLFKASGN--GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
           A  + KA     G I+   S+      P+ + Y A K A+  LTK+ A +    +I    
Sbjct: 154 AFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTALDGRMHDIACGQ 213

Query: 178 VAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLC-LPAASYITG 236
           +      T M      G            +         + ++  V ++  LP ++ +  
Sbjct: 214 IDIGNAATDMTARMSTGVL------QANGEVAAEPTIPIEHIAEAVVYMASLPLSANVLT 267

Query: 237 QIICVDGG 244
             +     
Sbjct: 268 MTVMATRM 275

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score =  189 bits (483), Expect = 4e-60
 Identities = 75/245 (30%), Positives = 116/245 (47%), Gaps = 20/245 (8%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             LV   +RGIG A  + L++ GA V  C+RN+  L    H +          VCDL   
Sbjct: 21  GVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYV---------VCDLR-- 69

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
               K ++ +      +++IL+ NA         ++T ED      + F ++  + +   
Sbjct: 70  ----KDLDLLFEKV-KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYL 124

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P  K  G G IV I+S   +  I ++    + + A+    K L+ E A   I  N VAP 
Sbjct: 125 PAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPG 184

Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
             +T  +K  E   E  E    +  Q P+ R  +P+E++S+VAFLC   ASY+TGQ I V
Sbjct: 185 WTETERVK--ELLSE--EKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQTIVV 240

Query: 242 DGGVT 246
           DGG++
Sbjct: 241 DGGLS 245

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score =  190 bits (484), Expect = 5e-60
 Identities = 56/257 (21%), Positives = 97/257 (37%), Gaps = 21/257 (8%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLS 59
            ALVTG  +GIG A  E L   GA V     N             +    K     CD++
Sbjct: 9   VALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVA 68

Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
            ++Q       V   F G+L+IL+NNA +           ++       N  SV   + L
Sbjct: 69  DQQQLRDTFRKVVDHF-GRLDILVNNAGVN--------NEKNWEKTLQINLVSVISGTYL 119

Query: 120 AHPLFKASGNGS---IVFISSVGGVRGIPSVSLYGAYKGAMNQLTKN--LACEWAKDNIR 174
                     G    I+ +SS+ G+  +    +Y A K  +   T++  LA       +R
Sbjct: 120 GLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSGVR 179

Query: 175 TNTVAPWVIKTSMIKPFEE---GPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAA 231
            N + P  + T++++  E+     +  E+ D I          +P  +++ +  L    A
Sbjct: 180 LNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIEDDA 239

Query: 232 SYITGQIICVDGGVTVT 248
             + G I+ +     + 
Sbjct: 240 --LNGAIMKITTSKGIH 254

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score =  189 bits (483), Expect = 5e-60
 Identities = 72/251 (28%), Positives = 114/251 (45%), Gaps = 11/251 (4%)

Query: 2   TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
            AL+T GT+G+G    E+L   G  +  T   +   ++     +K+   ++     D++ 
Sbjct: 9   HALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTK 68

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPT--VDITAEDMSTVSSTNFESVFHLSQ 118
           +E   K++E   S F GK++ LINNA     +    VD   ++ + +   N  +VFHL +
Sbjct: 69  KEDLHKIVEEAMSHF-GKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLK 127

Query: 119 LAHPLFKASGNGSIVFIS--SVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTN 176
           L  P+ +    G I+           G    S + A K  +  LTK +A E A+  I  N
Sbjct: 128 LVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITAN 187

Query: 177 TVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG 236
            V P  I   M    E   +  E        TPIGR+G  ++++  ++FLC   +  ITG
Sbjct: 188 MVCPGDIIGEMK---EATIQ--EARQLKEHNTPIGRSGTGEDIARTISFLCEDDSDMITG 242

Query: 237 QIICVDGGVTV 247
            II V G V V
Sbjct: 243 TIIEVTGAVDV 253

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score =  188 bits (480), Expect = 2e-59
 Identities = 79/249 (31%), Positives = 122/249 (48%), Gaps = 16/249 (6%)

Query: 2   TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
            A VTGG  G+G A    L   G  +  + S     +   L   ++ G        D++ 
Sbjct: 27  VAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVAD 86

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD-----ITAEDMSTVSSTNFESVFH 115
            E  E+  E V + F GK+++LINNA I     T D     +T  D   V  T+ +++F+
Sbjct: 87  FESCERCAEKVLADF-GKVDVLINNAGI-----TRDATFMKMTKGDWDAVMRTDLDAMFN 140

Query: 116 LSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
           +++           G IV I SV G RG    + Y + K  ++  TK LA E AK  I  
Sbjct: 141 VTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLALETAKRGITV 200

Query: 176 NTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT 235
           NTV+P  + T+M++   +    ++ L  I    P+GR G PDEV++L+AFLC   A ++T
Sbjct: 201 NTVSPGYLATAMVEAVPQDVLEAKILPQI----PVGRLGRPDEVAALIAFLCSDDAGFVT 256

Query: 236 GQIICVDGG 244
           G  + ++GG
Sbjct: 257 GADLAINGG 265

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score =  187 bits (477), Expect = 2e-59
 Identities = 85/249 (34%), Positives = 122/249 (48%), Gaps = 18/249 (7%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            ALVTG +RGIG      LA  GA V   + +Q   +   +  K KGFK  G V ++S  
Sbjct: 7   VALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDI 66

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD-----ITAEDMSTVSSTNFESVFHL 116
           E  +     + +     ++IL+NNA I     T D     ++ ++  +V +TN  S+F +
Sbjct: 67  ESIQNFFAEIKAEN-LAIDILVNNAGI-----TRDNLMMRMSEDEWQSVINTNLSSIFRM 120

Query: 117 SQLA-HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
           S+     + K    G I+ I SV G  G P  + Y A K  +   +K+LA E A  NI  
Sbjct: 121 SKECVRGMMKKR-WGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVASRNITV 179

Query: 176 NTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT 235
           N VAP  I T M     +     E    IA + P G+ GEP ++++ VAFL    A YIT
Sbjct: 180 NVVAPGFIATDMTDKLTD-----EQKSFIATKIPSGQIGEPKDIAAAVAFLASEEAKYIT 234

Query: 236 GQIICVDGG 244
           GQ + V+GG
Sbjct: 235 GQTLHVNGG 243

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score =  188 bits (479), Expect = 2e-59
 Identities = 72/249 (28%), Positives = 113/249 (45%), Gaps = 11/249 (4%)

Query: 2   TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
             LVTGG+RGIG A     AR G  +    + N+   DA +      G +      D+ +
Sbjct: 28  VVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGN 87

Query: 61  REQREKLIETVTSIFQGKLNILINNAAI-AFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
                 +   V   F G+L+ L+NNA I  + +   +++ E +  +   N       +  
Sbjct: 88  AADIAAMFSAVDRQF-GRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAE 146

Query: 120 AHPLF---KASGNGSIVFISSVGGVRGIP-SVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
           A        +   G+IV +SS+  + G       Y A K A++  T  LA E A + IR 
Sbjct: 147 AVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAASKAAIDTFTIGLAREVAAEGIRV 206

Query: 176 NTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT 235
           N V P +I+T +      G    +    +A   P+ RAG P+EV+  + +L  P+ASY+T
Sbjct: 207 NAVRPGIIETDL---HASGGL-PDRAREMAPSVPMQRAGMPEEVADAILYLLSPSASYVT 262

Query: 236 GQIICVDGG 244
           G I+ V GG
Sbjct: 263 GSILNVSGG 271

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score =  187 bits (478), Expect = 4e-59
 Identities = 85/248 (34%), Positives = 122/248 (49%), Gaps = 16/248 (6%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            A+VTG +RGIG A   ELAR GA+V   +  +   +     +K  G +  G+V +++  
Sbjct: 30  VAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDA 89

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD-----ITAEDMSTVSSTNFESVFHL 116
              + L+E+    F G LN+L+NNA I     T D     +  ++   V  TN ++VF L
Sbjct: 90  TAVDALVESTLKEF-GALNVLVNNAGI-----TQDQLAMRMKDDEWDAVIDTNLKAVFRL 143

Query: 117 SQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTN 176
           S+        +  G IV I+SV G  G P    Y A K  +  +T+ LA E     I  N
Sbjct: 144 SRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALAREIGSRGITVN 203

Query: 177 TVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG 236
            VAP  I T M K   +     E    +  Q P+GR G P++++  VAFL  P A YITG
Sbjct: 204 CVAPGFIDTDMTKGLPQ-----EQQTALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITG 258

Query: 237 QIICVDGG 244
             + V+GG
Sbjct: 259 TTLHVNGG 266

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score =  187 bits (477), Expect = 7e-59
 Identities = 65/275 (23%), Positives = 106/275 (38%), Gaps = 31/275 (11%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIV----------------HTCSRNQIELDARLHEWK 45
            A VTG  RG G +    LA+ GA +                   +    +L       K
Sbjct: 13  VAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVK 72

Query: 46  NKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIA-FVKPTVDITAEDMST 104
               ++  +  D+   +  +  +++      G+L+I++ NA I          + ED + 
Sbjct: 73  GHNRRIVTAEVDVRDYDALKAAVDSGVEQL-GRLDIIVANAGIGNGGDTLDKTSEEDWTE 131

Query: 105 VSSTNFESVFHLSQLAHPLFKASGN-GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKN 163
           +   N   V+   +   P   A G  GSI+  SSVGG++  P    Y A K  +  L + 
Sbjct: 132 MIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGVVGLMRA 191

Query: 164 LACEWAKDNIRTNTVAPWVIKTSMIKPF-----------EEGPEGSEFLDGIARQTPIGR 212
              E  +  IR N+V P  +KT M+                GP+    +  +    PI  
Sbjct: 192 FGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFHTLPIPW 251

Query: 213 AGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTV 247
             EP ++S+ V F     A YITG  + +D G  +
Sbjct: 252 -VEPIDISNAVLFFASDEARYITGVTLPIDAGSCL 285

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score =  185 bits (473), Expect = 1e-58
 Identities = 79/249 (31%), Positives = 121/249 (48%), Gaps = 17/249 (6%)

Query: 2   TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
            ALVTG +RGIG A   +LA+ GA +V   + N+ + +  + E K  G        D+++
Sbjct: 6   VALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVAN 65

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD-----ITAEDMSTVSSTNFESVFH 115
            E    +++    +F G+++IL+NNA +     T D     +  E+  TV +TN + VF 
Sbjct: 66  AEDVTNMVKQTVDVF-GQVDILVNNAGV-----TKDNLLMRMKEEEWDTVINTNLKGVFL 119

Query: 116 LSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
            ++          +G IV I+SV GV G P  + Y A K  +  LTK  A E A  NI  
Sbjct: 120 CTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELASRNITV 179

Query: 176 NTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT 235
           N +AP  I T M    +E          + +  P  + GE  ++++ V F     + YIT
Sbjct: 180 NAIAPGFIATDMTDVLDE-----NIKAEMLKLIPAAQFGEAQDIANAVTFFASDQSKYIT 234

Query: 236 GQIICVDGG 244
           GQ + VDGG
Sbjct: 235 GQTLNVDGG 243

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score =  186 bits (475), Expect = 2e-58
 Identities = 73/266 (27%), Positives = 110/266 (41%), Gaps = 31/266 (11%)

Query: 2   TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHE-WKNKGFKVTGSVCDLS 59
            A+VTG  + IG A   +L + G  +V     +     +   E  K +         DL+
Sbjct: 25  AAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLT 84

Query: 60  SREQR----EKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMST----------V 105
           +        E++I +    F G+ ++L+NNA+  +  P V    ED S           +
Sbjct: 85  NSNVLPASCEEIINSCFRAF-GRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAEL 143

Query: 106 SSTNFESVFHLSQLAHPLFKAS------GNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159
             TN  + F L+       K +       N SIV +      +   + SLY   K A+  
Sbjct: 144 IGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVG 203

Query: 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGR-AGEPDE 218
           LT++ A E A   IR N VAP V    +           E  D   R+ P+GR     ++
Sbjct: 204 LTQSAALELAPYGIRVNGVAPGVSLLPVAMG-------EEEKDKWRRKVPLGRREASAEQ 256

Query: 219 VSSLVAFLCLPAASYITGQIICVDGG 244
           ++  V FL   +A YITG II VDGG
Sbjct: 257 IADAVIFLVSGSAQYITGSIIKVDGG 282

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score =  187 bits (476), Expect = 2e-58
 Identities = 70/271 (25%), Positives = 116/271 (42%), Gaps = 27/271 (9%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIV------------HTCSRNQIELDARLHEWKNKGF 49
            A +TG  RG G +    LAR GA +                    +L   + + +  G 
Sbjct: 30  VAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGR 89

Query: 50  KVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIA-FVKPTVDITAEDMSTVSST 108
           ++  S  D+   +  +  ++   +   G+L+I++ NAA+A        +  +    +   
Sbjct: 90  RIIASQVDVRDFDAMQAAVDDGVTQL-GRLDIVLANAALASEGTRLNRMDPKTWRDMIDV 148

Query: 109 NFESVFHLSQLAHP-LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACE 167
           N    +  +++A P +      GSIVF SS+GG+RG  ++  Y A K  ++ L + +A E
Sbjct: 149 NLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHGLMRTMALE 208

Query: 168 WAKDNIRTNTVAPWVIKTSMI---------KPFEEGP--EGSEFLDGIARQTPIGRAGEP 216
               NIR N V P  + T M+         +P  E P  E  +         PI    EP
Sbjct: 209 LGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLPIPY-VEP 267

Query: 217 DEVSSLVAFLCLPAASYITGQIICVDGGVTV 247
            ++S+ + FL    A YITG  + VDGG  +
Sbjct: 268 ADISNAILFLVSDDARYITGVSLPVDGGALL 298

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score =  185 bits (472), Expect = 2e-58
 Identities = 52/251 (20%), Positives = 102/251 (40%), Gaps = 16/251 (6%)

Query: 2   TALVTGGTRGIGHATVEELARF---GAIVHTCSRNQIELD--ARLHEWKNKGFKVTGSVC 56
             ++TG +RG G A   +LAR    G+++   +R++  L         +    KV  +  
Sbjct: 8   VCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAA 67

Query: 57  DLSSREQREKLIETVTSIFQ---GKLNILINNAAIAF---VKPTVDITAEDMSTVSSTNF 110
           DL +    ++L+  V  + +    +  +LINNAA                +++   + N 
Sbjct: 68  DLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNL 127

Query: 111 ESVFHLSQLAHPLFKASGN--GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEW 168
            S+  L+      F+ S     ++V ISS+  ++      LY A K A + L + LA E 
Sbjct: 128 TSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQVLAAE- 186

Query: 169 AKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCL 228
            + ++R  + AP  +   M +   E  +  E    + +    G   +    +  +  L L
Sbjct: 187 -EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKLLGL-L 244

Query: 229 PAASYITGQII 239
              ++ +G  +
Sbjct: 245 QKDTFQSGAHV 255

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score =  187 bits (477), Expect = 2e-58
 Identities = 73/269 (27%), Positives = 116/269 (43%), Gaps = 24/269 (8%)

Query: 2   TALVTGGTRGIGHATVEELARFGA------------IVHTCSRNQIELDARLHEWKNKGF 49
            A +TG  RG G      LA+ GA             +     +  EL   +   + +G 
Sbjct: 48  VAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGR 107

Query: 50  KVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTN 109
           ++     D+      + +++   + F G ++IL++N  I+     V +T +  S +  TN
Sbjct: 108 RIIARQADVRDLASLQAVVDEALAEF-GHIDILVSNVGISNQGEVVSLTDQQWSDILQTN 166

Query: 110 FESVFHLSQLAHPLFKASGN-GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEW 168
               +H  +   P     G  GS++F+SS  G+RG P  S Y A K  +  L  +LA E 
Sbjct: 167 LIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQGLMLSLANEV 226

Query: 169 AKDNIRTNTVAPWVIKTSMI---------KPFEEGPEGSEFLDGIARQTPIG-RAGEPDE 218
            + NIR N+V P  + T M           P  E P   +  +  ++ T +     EP++
Sbjct: 227 GRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLPIPWVEPED 286

Query: 219 VSSLVAFLCLPAASYITGQIICVDGGVTV 247
           VS+ VA+L    A YI G  I VDGG   
Sbjct: 287 VSNAVAWLASDEARYIHGAAIPVDGGQLA 315

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score =  186 bits (474), Expect = 3e-58
 Identities = 75/249 (30%), Positives = 113/249 (45%), Gaps = 9/249 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDAR--LHEWKNKGFKVTGSVCDLS 59
            ALVTGG  GIG A     AR GA V        E DA+      +  G K      DLS
Sbjct: 51  KALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLS 110

Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTV-DITAEDMSTVSSTNFESVFHLSQ 118
                  L+        G L+IL   A      P + D+T+E      + N  ++F ++Q
Sbjct: 111 DESFARSLVHKAREAL-GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQ 169

Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
            A PL       SI+  SS+   +  P +  Y A K A+   ++ LA + A+  IR N V
Sbjct: 170 EAIPLLPKGA--SIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIV 227

Query: 179 APWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI 238
           AP  I T++      G +  + +    +QTP+ RAG+P E++ +  +L    +SY+T ++
Sbjct: 228 APGPIWTALQIS---GGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAEV 284

Query: 239 ICVDGGVTV 247
             V GG  +
Sbjct: 285 HGVCGGEHL 293

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score =  185 bits (473), Expect = 3e-58
 Identities = 49/258 (18%), Positives = 98/258 (37%), Gaps = 26/258 (10%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE---LDARLH----EWKNKGFKVTGS 54
           T  ++GG+RGIG A  + +A  GA V   +++      L   ++    E +  G +    
Sbjct: 11  TMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPI 70

Query: 55  VCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVF 114
           V D+   +     +      F G ++I +NNA+   +    ++  +    ++       +
Sbjct: 71  VGDIRDGDAVAAAVAKTVEQF-GGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTY 129

Query: 115 HLSQLAHPLFKASGNGSIVFISSVGGVR-GIPSVSLYGAYKGAMNQLTKNLACEWAKDNI 173
            +SQ   P  K   N  I+ +S    +       + Y   K  M      +A E     I
Sbjct: 130 AVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPYMMAKYGMTLCALGIAEELRDAGI 189

Query: 174 RTNTVAP-WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAAS 232
            +NT+ P   + T+ ++            + +     + R+ +P+  +     +    +S
Sbjct: 190 ASNTLWPRTTVATAAVQ------------NLLGGDEAMARSRKPEVYADAAYVVLNKPSS 237

Query: 233 YITGQIICVDG----GVT 246
           Y    ++C D     GVT
Sbjct: 238 YTGNTLLCEDVLLESGVT 255

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score =  184 bits (470), Expect = 3e-58
 Identities = 81/249 (32%), Positives = 126/249 (50%), Gaps = 17/249 (6%)

Query: 2   TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
           +ALVTG +RGIG +   +LA  G  +    + ++ + +A + E K KG        +++ 
Sbjct: 6   SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVAD 65

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD-----ITAEDMSTVSSTNFESVFH 115
            ++ + +I+ V S F G L++L+NNA I     T D     +  ++   V  TN + VF+
Sbjct: 66  ADEVKAMIKEVVSQF-GSLDVLVNNAGI-----TRDNLLMRMKEQEWDDVIDTNLKGVFN 119

Query: 116 LSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
             Q A P      +G+I+ +SSV G  G P  + Y A K  +  LTK+ A E A   I  
Sbjct: 120 CIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITV 179

Query: 176 NTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT 235
           N VAP  I + M     +     E  + +  Q P+ R G+  ++++ VAFL    A YIT
Sbjct: 180 NAVAPGFIVSDMTDALSD-----ELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYIT 234

Query: 236 GQIICVDGG 244
           GQ I V+GG
Sbjct: 235 GQTIHVNGG 243

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score =  185 bits (472), Expect = 3e-58
 Identities = 67/268 (25%), Positives = 104/268 (38%), Gaps = 23/268 (8%)

Query: 2   TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQI-----------ELDARLHEWKNKGF 49
           TAL+TGG RG+G +    LA  GA I                    +L   +   +  G 
Sbjct: 12  TALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGR 71

Query: 50  KVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTN 109
           +   +  D+  R   E  +        G ++I I NA I+ +    ++ +     V  TN
Sbjct: 72  RCISAKVDVKDRAALESFVAEAEDTL-GGIDIAITNAGISTIALLPEVESAQWDEVIGTN 130

Query: 110 FESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA 169
               F+      P       G IV +SS+ G     + + Y + K  +  LTK  A +  
Sbjct: 131 LTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSKWGVIGLTKCAAHDLV 190

Query: 170 KDNIRTNTVAPWVIKTSMI---------KPFEEGPEGSEFLDG-IARQTPIGRAGEPDEV 219
              I  N VAP  I+T M          +P  E P   +      +         +P+EV
Sbjct: 191 GYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAPFLKPEEV 250

Query: 220 SSLVAFLCLPAASYITGQIICVDGGVTV 247
           +  V FL   A+S+ITG ++ +D G T 
Sbjct: 251 TRAVLFLVDEASSHITGTVLPIDAGATA 278

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score =  185 bits (471), Expect = 4e-58
 Identities = 56/242 (23%), Positives = 86/242 (35%), Gaps = 14/242 (5%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            A+VTG   G+G A    LA  G  V    R    L     E    G        D++  
Sbjct: 30  IAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI---GDDALCVPTDVTDP 86

Query: 62  EQREKLIETVTSIFQGKLNILINNAAI-AFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
           +    L       F G++++L NNA   A   P  D+T      V  TN    F  +Q A
Sbjct: 87  DSVRALFTATVEKF-GRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEA 145

Query: 121 HPLFKASGN--GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
             + KA     G I+   S+      P  + Y A K A+  LTK+ + +    +I    +
Sbjct: 146 FRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSLDGRVHDIACGQI 205

Query: 179 APWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLC-LPAASYITGQ 237
                 T M +  + G               +    +   V+S V ++  LP  + +   
Sbjct: 206 DIGNADTPMAQKMKAGVP------QADLSIKVEPVMDVAHVASAVVYMASLPLDANVQFM 259

Query: 238 II 239
            I
Sbjct: 260 TI 261

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score =  184 bits (469), Expect = 5e-58
 Identities = 39/255 (15%), Positives = 76/255 (29%), Gaps = 32/255 (12%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             LV GG+  +G   V+          +    +                        S  
Sbjct: 24  NILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADHSFT------------IKDSGE 71

Query: 62  EQREKLIETVTSIFQGKLNILINNAAI-AFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
           E+ + +IE + S    K++  +  A   +    + D   + +  +   N  S F  + + 
Sbjct: 72  EEIKSVIEKINSKS-IKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIG 130

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA--KDNIRTNTV 178
             L      G  V   +   +     +  YGA K A + + K+LA E         +  +
Sbjct: 131 AKLLN--QGGLFVLTGASAALNRTSGMIAYGATKAATHHIIKDLASENGGLPAGSTSLGI 188

Query: 179 APWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI 238
            P  + T   + +                TP+    E      L  +     +    G +
Sbjct: 189 LPVTLDTPTNRKYMSDAN-------FDDWTPLSEVAEK-----LFEWSTNSDSRPTNGSL 236

Query: 239 ICVD--GGVTVTVNV 251
           +  +    VT   N+
Sbjct: 237 VKFETKSKVTTWTNL 251

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score =  184 bits (470), Expect = 5e-58
 Identities = 75/256 (29%), Positives = 112/256 (43%), Gaps = 23/256 (8%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVT-------GS 54
            ALVTG   GIG A    LA  GA V  C  ++      +      G K           
Sbjct: 9   LALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAF 68

Query: 55  VCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD-----ITAEDMSTVSSTN 109
             D+S       L+E V + F    +++++ A I     T D     ++ +D   V + N
Sbjct: 69  QADVSEARAARCLLEQVQACFSRPPSVVVSCAGI-----TQDEFLLHMSEDDWDKVIAVN 123

Query: 110 FESVFHLSQLA-HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEW 168
            +  F ++Q A   L      GSI+ ISS+ G  G    + Y A K  +  LT+  A E 
Sbjct: 124 LKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAAREL 183

Query: 169 AKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCL 228
            +  IR N+V P  I T M +   +     + +D I    P+G  G+P++V+ +VAFL  
Sbjct: 184 GRHGIRCNSVLPGFIATPMTQKVPQ-----KVVDKITEMIPMGHLGDPEDVADVVAFLAS 238

Query: 229 PAASYITGQIICVDGG 244
             + YITG  + V GG
Sbjct: 239 EDSGYITGTSVEVTGG 254

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score =  183 bits (467), Expect = 7e-58
 Identities = 75/250 (30%), Positives = 112/250 (44%), Gaps = 18/250 (7%)

Query: 2   TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
             +VTG +RGIG A    L + G  ++   +R+    +    + +  G +      D+S 
Sbjct: 3   VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSK 62

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD-----ITAEDMSTVSSTNFESVFH 115
               E +++T    + G +++++NNA I     T D     +       V   N   VF 
Sbjct: 63  EADVEAMMKTAIDAW-GTIDVVVNNAGI-----TRDTLLIRMKKSQWDEVIDLNLTGVFL 116

Query: 116 LSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
            +Q A  +      G I+ I+SV G+ G    + Y A K  +   +K  A E A  NI  
Sbjct: 117 CTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINV 176

Query: 176 NTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCL-PAASYI 234
           N V P  I + M     E     +    I    P+GR G+P+ V+ LV FL L PAASYI
Sbjct: 177 NVVCPGFIASDMTAKLGE-----DMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYI 231

Query: 235 TGQIICVDGG 244
           TGQ   +DGG
Sbjct: 232 TGQAFTIDGG 241

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score =  184 bits (470), Expect = 1e-57
 Identities = 75/254 (29%), Positives = 115/254 (45%), Gaps = 21/254 (8%)

Query: 2   TALVTGGTRGIGHATVEELARFGA---IVHTCSRNQIELDAR--LHEWKNKGFKVTGSVC 56
             L+TGG  GIG A     A+ GA   I +       E DA       + +G K      
Sbjct: 49  NVLITGGDSGIGRAVSIAFAKEGANIAIAYLDE----EGDANETKQYVEKEGVKCVLLPG 104

Query: 57  DLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTV-DITAEDMSTVSSTNFESVFH 115
           DLS  +  + +++       G LNIL+NN A  + +  +  ITAE +      N  S FH
Sbjct: 105 DLSDEQHCKDIVQETVRQL-GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFH 163

Query: 116 LSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
           +++ A    K      I+  +S+    G  ++  Y A KGA+   T++L+    +  IR 
Sbjct: 164 VTKAALSHLKQGD--VIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGIRV 221

Query: 176 NTVAPWVIKTSMIKPFEEGPEG--SEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASY 233
           N VAP  I T +I      P     + +       P+ R G+P E++    +L    +SY
Sbjct: 222 NGVAPGPIWTPLI------PSSFDEKKVSQFGSNVPMQRPGQPYELAPAYVYLASSDSSY 275

Query: 234 ITGQIICVDGGVTV 247
           +TGQ+I V+GGV V
Sbjct: 276 VTGQMIHVNGGVIV 289

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score =  183 bits (467), Expect = 1e-57
 Identities = 61/239 (25%), Positives = 105/239 (43%), Gaps = 15/239 (6%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            A+VTG +RGIG A   +L   GA V   +R+  +L A   E    G +     CDLS  
Sbjct: 31  VAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHS 90

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
           +        V +   G+ ++L+NNA +  F  P   +   +   + + N ++ + L +  
Sbjct: 91  DAIAAFATGVLAAH-GRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAF 149

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
            P   A+  G I+ ISS+ G   +   + Y A K  +N L  + A E  +  +R + VAP
Sbjct: 150 APAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAP 209

Query: 181 WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
             ++T                 G++ +     A EPD+++ +VA L   A      +++
Sbjct: 210 GSVRTEF-------------GVGLSAKKSALGAIEPDDIADVVALLATQADQSFISEVL 255

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score =  182 bits (464), Expect = 2e-57
 Identities = 90/250 (36%), Positives = 119/250 (47%), Gaps = 19/250 (7%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSS 60
            +LVTG TRGIG A  E+LA  G+ V     +     A   E  NK G K  G   +L S
Sbjct: 9   VSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLS 68

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD-----ITAEDMSTVSSTNFESVFH 115
            E   K  E + ++    ++IL+NNA I     T D     ++  D   V   N    F 
Sbjct: 69  EESINKAFEEIYNLV-DGIDILVNNAGI-----TRDKLFLRMSLLDWEEVLKVNLTGTFL 122

Query: 116 LSQLA-HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIR 174
           ++Q +   + K    G IV ISSV G  G      Y   K  +   TK+LA E A  N+ 
Sbjct: 123 VTQNSLRKMIKQRW-GRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKELAPRNVL 181

Query: 175 TNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYI 234
            N VAP  I+T M     E     E       Q P+GR G P+EV+++V FLC   ASYI
Sbjct: 182 VNAVAPGFIETDMTAVLSE-----EIKQKYKEQIPLGRFGSPEEVANVVLFLCSELASYI 236

Query: 235 TGQIICVDGG 244
           TG++I V+GG
Sbjct: 237 TGEVIHVNGG 246

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score =  182 bits (465), Expect = 3e-57
 Identities = 85/250 (34%), Positives = 117/250 (46%), Gaps = 21/250 (8%)

Query: 2   TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
            ALVTG +RGIG A   ELA  GA +    + +    D  +      G +      D+S 
Sbjct: 30  IALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQ 89

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD-----ITAEDMSTVSSTNFESVFH 115
             + E L   V   + G+L++L+NNA I     T D     +  +D  +V   N   VF 
Sbjct: 90  ESEVEALFAAVIERW-GRLDVLVNNAGI-----TRDTLLLRMKRDDWQSVLDLNLGGVFL 143

Query: 116 LSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
            S+ A  +     +G I+ I+SV G  G P  + Y A K  +  LTK +A E A   I  
Sbjct: 144 CSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELASRGITV 203

Query: 176 NTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCL-PAASYI 234
           N VAP  I T M              + +    P+GR GE  EV+ +V FL   PAA+YI
Sbjct: 204 NAVAPGFIATDMTSELAA--------EKLLEVIPLGRYGEAAEVAGVVRFLAADPAAAYI 255

Query: 235 TGQIICVDGG 244
           TGQ+I +DGG
Sbjct: 256 TGQVINIDGG 265

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  181 bits (461), Expect = 5e-57
 Identities = 53/244 (21%), Positives = 85/244 (34%), Gaps = 20/244 (8%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             +VTG   G+G A    L   G  V    R    L  +       G  V G V DL+  
Sbjct: 5   HIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL---GNAVIGIVADLAHH 61

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           E  +           G   ++++ A      P    TAE +  V  +N  S   ++Q   
Sbjct: 62  EDVDVAFAAAVEWG-GLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTV 120

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
            L    G G +  + S     G  + SLY A K  M    ++L  E     +R   + P 
Sbjct: 121 RLIGERG-GVLANVLSSAAQVGKANESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPS 179

Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAF-LCLPAASYITGQIIC 240
            I++             EF D      P      P++ ++ +   L   ++ ++T   I 
Sbjct: 180 GIRS-------------EFWDNTDHVDP-SGFMTPEDAAAYMLDALEARSSCHVTDLFIG 225

Query: 241 VDGG 244
            + G
Sbjct: 226 RNEG 229

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score =  181 bits (461), Expect = 8e-57
 Identities = 58/248 (23%), Positives = 103/248 (41%), Gaps = 9/248 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             +VTG +RGIG     +L + GA V+   R+   L     E ++ G +    VCD S  
Sbjct: 7   VCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQE 66

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIA-------FVKPTVDITAEDMSTVSSTNFESVF 114
            +   L E V    QG+L++L+NNA            K   +  A     +++      +
Sbjct: 67  SEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHY 126

Query: 115 HLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIR 174
             S     L   +G G IV ISS G ++ + +V  YG  K A ++L  + A E  +  + 
Sbjct: 127 FCSVYGARLMVPAGQGLIVVISSPGSLQYMFNVP-YGVGKAACDKLAADCAHELRRHGVS 185

Query: 175 TNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCL-PAASY 233
             ++ P +++T ++K      E  +       ++    A   +     V  L   P    
Sbjct: 186 CVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCVVALATDPNILS 245

Query: 234 ITGQIICV 241
           ++G+++  
Sbjct: 246 LSGKVLPS 253

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score =  180 bits (460), Expect = 9e-57
 Identities = 72/248 (29%), Positives = 109/248 (43%), Gaps = 22/248 (8%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             L+TG   GIG AT+E  A+ GA +  C   +  L         +       V D++  
Sbjct: 7   AVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAA-----EAVGAHPVVMDVADP 61

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD-----ITAEDMSTVSSTNFESVFHL 116
              E+      +   G+L+ +++ A I     T D     +  ED   V   N    F +
Sbjct: 62  ASVERGFAEALAHL-GRLDGVVHYAGI-----TRDNFHWKMPLEDWELVLRVNLTGSFLV 115

Query: 117 SQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTN 176
           ++ A    +    GSIV  +S   + G    + Y A    +  LT+ LA E  +  IR N
Sbjct: 116 AKAASEAMREKNPGSIVLTASRVYL-GNLGQANYAASMAGVVGLTRTLALELGRWGIRVN 174

Query: 177 TVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG 236
           T+AP  I+T M     E     +  +     TP+GRAG+P EV+    FL    +S+ITG
Sbjct: 175 TLAPGFIETRMTAKVPE-----KVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFITG 229

Query: 237 QIICVDGG 244
           Q++ VDGG
Sbjct: 230 QVLFVDGG 237

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score =  180 bits (460), Expect = 1e-56
 Identities = 86/249 (34%), Positives = 123/249 (49%), Gaps = 21/249 (8%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            ALVTG +RGIG A  E LA  GA V   + ++    A        G    G   ++++ 
Sbjct: 11  VALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYL---GDNGKGMALNVTNP 67

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD-----ITAEDMSTVSSTNFESVFHL 116
           E  E +++ +T  F G ++IL+NNA I     T D     +  E+ S +  TN  S+F L
Sbjct: 68  ESIEAVLKAITDEF-GGVDILVNNAGI-----TRDNLLMRMKEEEWSDIMETNLTSIFRL 121

Query: 117 SQLA-HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
           S+     + K    G I+ + SV G  G    + Y A K  +   TK++A E A   +  
Sbjct: 122 SKAVLRGMMKKRQ-GRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTV 180

Query: 176 NTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT 235
           NTVAP  I+T M K   +     E       Q P GR G+P E++S VAFL  P A+YIT
Sbjct: 181 NTVAPGFIETDMTKALND-----EQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYIT 235

Query: 236 GQIICVDGG 244
           G+ + V+GG
Sbjct: 236 GETLHVNGG 244

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score =  181 bits (462), Expect = 1e-56
 Identities = 62/270 (22%), Positives = 104/270 (38%), Gaps = 31/270 (11%)

Query: 2   TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKN-KGFKVTGSVCDLS 59
            A++TGG R IGH+    L + G  +V     ++      + E    +         DLS
Sbjct: 13  AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLS 72

Query: 60  SREQ----REKLIETVTSIFQGKLNILINNAAIAFVKP-----------TVDITAEDMST 104
                    E +I+     F G+ ++L+NNA+  +  P                   ++ 
Sbjct: 73  LSSSLLDCCEDIIDCSFRAF-GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAE 131

Query: 105 VSSTNFESVFHLSQLAHPLFKASG-----NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159
           +  +N  +   L +         G     N S+V +        +P   +Y   K A+  
Sbjct: 132 LFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGG 191

Query: 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGR-AGEPDE 218
           LT+  A E A  +IR N VAP +       P        E  +   R+ P+G+      +
Sbjct: 192 LTRAAALELAPRHIRVNAVAPGLSLLPPAMP-------QETQEEYRRKVPLGQSEASAAQ 244

Query: 219 VSSLVAFLCLPAASYITGQIICVDGGVTVT 248
           ++  +AFL    A YITG  + VDGG+ + 
Sbjct: 245 IADAIAFLVSKDAGYITGTTLKVDGGLILA 274

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score =  180 bits (460), Expect = 2e-56
 Identities = 69/269 (25%), Positives = 108/269 (40%), Gaps = 29/269 (10%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIV------------HTCSRNQIELDARLHEWKNKGF 49
            A +TG  RG G A    LA  GA +                    EL A +   ++ G 
Sbjct: 15  VAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGS 74

Query: 50  KVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTN 109
           ++     D+  RE     ++       G+L+I++ NA IA     +    +    V   N
Sbjct: 75  RIVARQADVRDRESLSAALQAGLDEL-GRLDIVVANAGIA----PMSAGDDGWHDVIDVN 129

Query: 110 FESVFHLSQLAHPLFKASGN-GSIVFISSVGGVRGI----PSVSLYGAYKGAMNQLTKNL 164
              V+H  ++A P     G  GSIV ISS  G+ G+    P    Y A K  +  L +  
Sbjct: 130 LTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGVVGLMRVY 189

Query: 165 ACEWAKDNIRTNTVAPWVIKTSMI------KPFEEGPEGSEFLDGIARQTPIGRAGEPDE 218
           A   A   IR N++ P  ++T MI      +   +    ++    +    P+     P++
Sbjct: 190 ANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMPVEV-LAPED 248

Query: 219 VSSLVAFLCLPAASYITGQIICVDGGVTV 247
           V++ VA+L    A YITG  + VD G   
Sbjct: 249 VANAVAWLVSDQARYITGVTLPVDAGFLN 277

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score =  180 bits (459), Expect = 2e-56
 Identities = 73/249 (29%), Positives = 112/249 (44%), Gaps = 21/249 (8%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            ALVTG T GIG A        GAIV      + +L        + G  V     +LS R
Sbjct: 29  KALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKE---IAADLGKDVFVFSANLSDR 85

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD-----ITAEDMSTVSSTNFESVFHL 116
           +  ++L E         ++IL+NNA I     T D     +  +D   V + N  +   L
Sbjct: 86  KSIKQLAEVAEREM-EGIDILVNNAGI-----TRDGLFVRMQDQDWDDVLAVNLTAASTL 139

Query: 117 SQLA-HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
           ++   H + +    G I+ I+S+ GV G P  + Y A K  +   +K LA E A  NI  
Sbjct: 140 TRELIHSMMRRR-YGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQEIASRNITV 198

Query: 176 NTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT 235
           N +AP  IK++M     E     +  + I    P+ R G  +E++    +L    A+Y+T
Sbjct: 199 NCIAPGFIKSAMTDKLNE-----KQKEAIMAMIPMKRMGIGEEIAFATVYLASDEAAYLT 253

Query: 236 GQIICVDGG 244
           GQ + ++GG
Sbjct: 254 GQTLHINGG 262

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score =  178 bits (455), Expect = 6e-56
 Identities = 85/251 (33%), Positives = 120/251 (47%), Gaps = 20/251 (7%)

Query: 2   TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFK-VTGSVCDLS 59
            AL+TG +RGIG A    LA  G  +     +N+ + +    E + +G   V     +L 
Sbjct: 3   KALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLL 62

Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD-----ITAEDMSTVSSTNFESVF 114
             E    L+     +  G L+ L+NNA I     T D     +  ED   V   N  +VF
Sbjct: 63  EAEAATALVHQAAEVL-GGLDTLVNNAGI-----TRDTLLVRMKDEDWEAVLEANLSAVF 116

Query: 115 HLSQLA-HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNI 173
             ++ A   + KA   G IV I+SV G+ G P  + Y A K  +   T+ +A E+A+  I
Sbjct: 117 RTTREAVKLMMKARF-GRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQRGI 175

Query: 174 RTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASY 233
             N VAP  I+T M +   +     E  +   +Q P GR G P+EV+  VAFL    A Y
Sbjct: 176 TVNAVAPGFIETEMTERLPQ-----EVKEAYLKQIPAGRFGRPEEVAEAVAFLVSEKAGY 230

Query: 234 ITGQIICVDGG 244
           ITGQ +CVDGG
Sbjct: 231 ITGQTLCVDGG 241

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score =  179 bits (456), Expect = 1e-55
 Identities = 62/279 (22%), Positives = 103/279 (36%), Gaps = 38/279 (13%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIV------------HTCSRNQIELDARLHEWKNKGF 49
             LVTGG RG G +   +LA  GA +                    +L+    E +  G 
Sbjct: 12  VVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGR 71

Query: 50  KVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTN 109
           K   +  D+  R    + +    + F GKL++++ NA I        +  +  +     +
Sbjct: 72  KAYTAEVDVRDRAAVSRELANAVAEF-GKLDVVVANAGIC--PLGAHLPVQAFADAFDVD 128

Query: 110 FESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI-----------PSVSLYGAYKGAMN 158
           F  V +    A P   +    SI+   SV G+              P  + Y   K  ++
Sbjct: 129 FVGVINTVHAALPYLTSGA--SIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAKQLVD 186

Query: 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMI---------KPFEEGPEGSEFLDGIARQTP 209
             T  LA + A  +IR N + P  + T M+         +P  E P  ++ L        
Sbjct: 187 SYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFPAMQA 246

Query: 210 IG-RAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTV 247
           +     E  ++S+ V FL    + Y+TG    VD G  +
Sbjct: 247 MPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAML 285

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score =  175 bits (447), Expect = 9e-55
 Identities = 79/249 (31%), Positives = 123/249 (49%), Gaps = 25/249 (10%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           T+L+TG + GIG A    L + G+ V     N+ +L +  +  K+        VC+L+++
Sbjct: 16  TSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIE---VCNLANK 72

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD-----ITAEDMSTVSSTNFESVFHL 116
           E+   LI          L+IL+ NA I     T D     +  +D   V   N ++ F L
Sbjct: 73  EECSNLISKT-----SNLDILVCNAGI-----TSDTLAIRMKDQDFDKVIDINLKANFIL 122

Query: 117 SQLA-HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
           ++ A   + +    G I+ ISS+ G+ G P  + Y A K  +  +TK+L+ E A   I  
Sbjct: 123 NREAIKKMIQKR-YGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGITV 181

Query: 176 NTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT 235
           N VAP  IK+ M     E     +  + I ++ P+G  G P++V+  VAFL    ASYIT
Sbjct: 182 NAVAPGFIKSDMTDKLNE-----KQREAIVQKIPLGTYGIPEDVAYAVAFLASNNASYIT 236

Query: 236 GQIICVDGG 244
           GQ + V+GG
Sbjct: 237 GQTLHVNGG 245

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score =  174 bits (443), Expect = 4e-54
 Identities = 79/249 (31%), Positives = 112/249 (44%), Gaps = 29/249 (11%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           + LVTGG RGIG A     A  G  V    R+    +                 CD++  
Sbjct: 23  SVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE-----------GFLAVKCDITDT 71

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD-----ITAEDMSTVSSTNFESVFHL 116
           EQ E+  + +     G + +LI NA +     T D     ++ ED ++V  TN    F +
Sbjct: 72  EQVEQAYKEIEETH-GPVEVLIANAGV-----TKDQLLMRMSEEDFTSVVETNLTGTFRV 125

Query: 117 SQLA-HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
            + A   + +A   G +V ISSV G+ G    + Y A K  +    ++LA E    NI  
Sbjct: 126 VKRANRAMLRAKK-GRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLARELGSRNITF 184

Query: 176 NTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT 235
           N VAP  + T M K   +     E    I  Q P+GR   P+E+++ V FL    ASYIT
Sbjct: 185 NVVAPGFVDTDMTKVLTD-----EQRANIVSQVPLGRYARPEEIAATVRFLASDDASYIT 239

Query: 236 GQIICVDGG 244
           G +I VDGG
Sbjct: 240 GAVIPVDGG 248

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score =  173 bits (442), Expect = 5e-54
 Identities = 73/249 (29%), Positives = 113/249 (45%), Gaps = 29/249 (11%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           + LVTGG RGIG A  + LA  G  V    R                  + G   D++  
Sbjct: 17  SVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK-----------GLFGVEVDVTDS 65

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD-----ITAEDMSTVSSTNFESVFHL 116
           +  ++    V     G + +L++NA +     + D     +T E    V + N    F +
Sbjct: 66  DAVDRAFTAVEEHQ-GPVEVLVSNAGL-----SADAFLMRMTEEKFEKVINANLTGAFRV 119

Query: 117 SQLA-HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
           +Q A   + +    G ++FI SV G+ GI + + Y A K  +  + +++A E +K N+  
Sbjct: 120 AQRASRSMQRNKF-GRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTA 178

Query: 176 NTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT 235
           N VAP  I T M +  +E         G  +  P  R G P EV+ +V+FL    ASYI+
Sbjct: 179 NVVAPGYIDTDMTRALDE-----RIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYIS 233

Query: 236 GQIICVDGG 244
           G +I VDGG
Sbjct: 234 GAVIPVDGG 242

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score =  174 bits (444), Expect = 7e-54
 Identities = 62/287 (21%), Positives = 106/287 (36%), Gaps = 48/287 (16%)

Query: 2   TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLS 59
            ALVTG  + +G +  E L   G  +     R+  E +A       +          DLS
Sbjct: 11  VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 70

Query: 60  S-----------------REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAED- 101
           +                   +  +L+    + + G+ ++L+NNA+  +  P +    +  
Sbjct: 71  NVATAPVSGADGSAPVTLFTRCAELVAACYTHW-GRCDVLVNNASSFYPTPLLRNDEDGH 129

Query: 102 -------------MSTVSSTNFESVFHLSQLAHPLFKASG------NGSIVFISSVGGVR 142
                         + +  +N  + + L +        +       N SI+ +      +
Sbjct: 130 EPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQ 189

Query: 143 GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLD 202
            +   ++Y   KGA+  LT++ A E A   IR N V P +       P           +
Sbjct: 190 PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMP-------PAVWE 242

Query: 203 GIARQTP-IGRAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVT 248
           G   + P   R     EVS +V FLC   A YITG  + VDGG ++T
Sbjct: 243 GHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT 289

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score =  174 bits (442), Expect = 3e-53
 Identities = 62/287 (21%), Positives = 105/287 (36%), Gaps = 48/287 (16%)

Query: 2   TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLS 59
            ALVTG  + +G +  E L   G  +     R+  E +A       +          DLS
Sbjct: 48  VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 107

Query: 60  -----------------SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAED- 101
                               +  +L+    + + G+ ++L+NNA+  +  P +    +  
Sbjct: 108 NVATAPVSGADGSAPVTLFTRCAELVAACYTHW-GRCDVLVNNASSFYPTPLLRNDEDGH 166

Query: 102 -------------MSTVSSTNFESVFHLSQLAHPLFKASG------NGSIVFISSVGGVR 142
                         + +  +N  + + L +        +       N SI+ +      +
Sbjct: 167 EPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQ 226

Query: 143 GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLD 202
            +   ++Y   KGA+  LT++ A E A   IR N V P +       P           +
Sbjct: 227 PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMP-------PAVWE 279

Query: 203 GIARQTP-IGRAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVT 248
           G   + P   R     EVS +V FLC   A YITG  + VDGG ++T
Sbjct: 280 GHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT 326

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score =  171 bits (436), Expect = 4e-53
 Identities = 44/248 (17%), Positives = 81/248 (32%), Gaps = 20/248 (8%)

Query: 2   TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLS- 59
             +      GIG  T  EL +          R +        +  N    +T    D++ 
Sbjct: 7   NVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTV 66

Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
              + +KL++ +       ++ILIN A I        +    +    + NF  + + +  
Sbjct: 67  PVAESKKLLKKIFDQL-KTVDILINGAGI--------LDDHQIERTIAINFTGLVNTTTA 117

Query: 120 AHPLF---KASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTN 176
               +   K    G I  I SV G   I  V +Y A K A+   T +LA       +   
Sbjct: 118 ILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAY 177

Query: 177 TVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG 236
           ++ P + +T ++  F       +    +A           ++             +   G
Sbjct: 178 SINPGITRTPLVHTF---NSWLDVEPRVAELLLSHPTQTSEQCGQNFVKA---IEANKNG 231

Query: 237 QIICVDGG 244
            I  +D G
Sbjct: 232 AIWKLDLG 239

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score =  170 bits (432), Expect = 1e-52
 Identities = 38/253 (15%), Positives = 73/253 (28%), Gaps = 29/253 (11%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             LV GG   +G   V+        V +    + E  +           V  +       
Sbjct: 9   RVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVI-------VKMTDSFTEQA 61

Query: 62  EQREKLIETVTSIFQGKLNILINNAA-IAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
           +Q    +  +      K++ ++  A   A          ++   +   +  +    S LA
Sbjct: 62  DQVTAEVGKLLG--DQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLA 119

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA--KDNIRTNTV 178
               K    G +    +   + G P +  YG  KGA++QL ++LA + +          V
Sbjct: 120 TKHLK--EGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAV 177

Query: 179 APWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI 238
            P  + T M +                 +         + +               +G +
Sbjct: 178 LPVTLDTPMNRKSMP-------------EADFSSWTPLEFLVETFHDWITGNKRPNSGSL 224

Query: 239 ICV--DGGVTVTV 249
           I V    G T   
Sbjct: 225 IQVVTTDGKTELT 237

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  167 bits (424), Expect = 2e-51
 Identities = 42/240 (17%), Positives = 80/240 (33%), Gaps = 10/240 (4%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           T  V G    IG    ++ A  G  V    RN  +L   + E +  G ++     D  + 
Sbjct: 9   TVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNE 68

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           ++    +    +     L + I N       P ++ T      V      + F   + + 
Sbjct: 69  DEVTAFLNAADA--HAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESA 126

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIR-TNTVAP 180
            L  A G G I F  +   +RG    + + + K  +  + +++A E    NI   + +  
Sbjct: 127 RLMLAHGQGKIFFTGATASLRGGSGFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIID 186

Query: 181 WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCL-PAASYITGQII 239
             + T+ ++   E   G                  P  V+     L   P +++     I
Sbjct: 187 SGVDTAWVRERREQMFGK------DALANPDLLMPPAAVAGAYWQLYQQPKSAWTFEMEI 240

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score =  165 bits (419), Expect = 1e-50
 Identities = 54/245 (22%), Positives = 93/245 (37%), Gaps = 22/245 (8%)

Query: 2   TALVTGGTRGIGHATVEELARFGA-------IVHTCSRNQIELDARLHEWKNKGFKVTGS 54
             L+TG  +GIG A   E AR          ++   SR   +L+    E + +G      
Sbjct: 4   ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTI 63

Query: 55  VCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVF 114
             D+S      +L   +   + G ++ L+NNA +       D+T ED     +TN +  F
Sbjct: 64  TADISDMADVRRLTTHIVERY-GHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTF 122

Query: 115 HLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIR 174
            L+Q    L +   +G I FI+SV   +     S+Y   K     L + +     K N+R
Sbjct: 123 FLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNVR 182

Query: 175 TNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYI 234
              V P  + T                  +  +        P+++++ V    L  +  +
Sbjct: 183 ITDVQPGAVYT-------------PMWGKVDDEM-QALMMMPEDIAAPVVQAYLQPSRTV 228

Query: 235 TGQII 239
             +II
Sbjct: 229 VEEII 233

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score =  170 bits (432), Expect = 3e-50
 Identities = 66/251 (26%), Positives = 105/251 (41%), Gaps = 24/251 (9%)

Query: 2   TALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLS 59
            A+VTG  RGIG    E  AR GA  +         +L     +             D++
Sbjct: 215 VAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTAL-----TLDVT 269

Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD-----ITAEDMSTVSSTNFESVF 114
           + +  +K+   VT    GK++IL+NNA I     T D     +  +    V + N  +  
Sbjct: 270 ADDAVDKITAHVTEHHGGKVDILVNNAGI-----TRDKLLANMDEKRWDAVIAVNLLAPQ 324

Query: 115 HLSQ-LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNI 173
            L++ L        G G ++ +SS+ G+ G    + Y   K  M  L + LA   A   I
Sbjct: 325 RLTEGLVGNGTIGEG-GRVIGLSSMAGIAGNRGQTNYATTKAGMIGLAEALAPVLADKGI 383

Query: 174 RTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASY 233
             N VAP  I+T M +            +   R   + + G+P +V+ L+A+   PA++ 
Sbjct: 384 TINAVAPGFIETKMTEAIPLATR-----EVGRRLNSLFQGGQPVDVAELIAYFASPASNA 438

Query: 234 ITGQIICVDGG 244
           +TG  I V G 
Sbjct: 439 VTGNTIRVCGQ 449

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score =  162 bits (412), Expect = 1e-49
 Identities = 37/255 (14%), Positives = 81/255 (31%), Gaps = 30/255 (11%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             +V GG   +G A +E   + G  V     +  +                    + +  
Sbjct: 5   KVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVD----------GNKNWT 54

Query: 62  EQREKLIETVTSIFQ-GKLNILINNAAIAFVKPTV-DITAEDMSTVSSTNFESVFHLSQL 119
           EQ + ++E   S  Q  +++ +   A              ++   +   +  S    ++L
Sbjct: 55  EQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKL 114

Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA--KDNIRTNT 177
           A    K    G +    +   +   PS+  YG  K A++ LT +LA + +   DN    T
Sbjct: 115 ATTHLK--PGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLT 172

Query: 178 VAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCL-PAASYITG 236
           + P  + T M + +    +                      +S  +       ++   +G
Sbjct: 173 IMPVTLDTPMNRKWMPNAD-------------HSSWTPLSFISEHLLKWTTETSSRPSSG 219

Query: 237 QIICVDGGVTVTVNV 251
            ++ +      +   
Sbjct: 220 ALLKITTENGTSTIT 234

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  161 bits (410), Expect = 4e-49
 Identities = 45/249 (18%), Positives = 93/249 (37%), Gaps = 19/249 (7%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDA---RLHEWKNKGFKVTGSVCDL 58
            A++TG ++GIG      LA  G  V   +R++  L+     +        +      D+
Sbjct: 9   LAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDI 68

Query: 59  SSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQ 118
           +   + +  I+ +   + G ++IL+N AA+      +    ++   +   N  + + + +
Sbjct: 69  TDCTKADTEIKDIHQKY-GAVDILVNAAAMFMDGS-LSEPVDNFRKIMEINVIAQYGILK 126

Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
               + K   NG I  ++S     G     +YG+ K A+  L ++L  E A   IR  T+
Sbjct: 127 TVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAPLGIRVTTL 186

Query: 179 APWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLC-LPAASYITGQ 237
            P  + T             +               +PD++ + +  L  L     I   
Sbjct: 187 CPGWVNT-------------DMAKKAGTPFKDEEMIQPDDLLNTIRCLLNLSENVCIKDI 233

Query: 238 IICVDGGVT 246
           +  +   + 
Sbjct: 234 VFEMKKSII 242

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score =  162 bits (412), Expect = 1e-48
 Identities = 50/261 (19%), Positives = 92/261 (35%), Gaps = 31/261 (11%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE-------LDARLHEWKNKGFKVTGS 54
           T  +TG +RGIG A   + A+ GA +   ++           +     E +  G K    
Sbjct: 47  TVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPC 106

Query: 55  VCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVF 114
           + D+   +Q    +E     F G ++IL+NNA+   +  T+D   + +  + + N    +
Sbjct: 107 IVDVRDEQQISAAVEKAIKKF-GGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTY 165

Query: 115 HLSQLAHPLFKASGNGSIVFISSVGGVRG--IPSVSLYGAYKGAMNQLTKNLACEWAKDN 172
             S+   P  K S    I+ IS    +          Y   K  M+     +A E+ K  
Sbjct: 166 LASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMAEEF-KGE 224

Query: 173 IRTNTVAP-WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAA 231
           I  N + P   I T+ +             D +       +  + D ++     +     
Sbjct: 225 IAVNALWPKTAIHTAAM-------------DMLGGPGIESQCRKVDIIADAAYSIF-QKP 270

Query: 232 SYITGQIICVDG-----GVTV 247
              TG  +  +      G+  
Sbjct: 271 KSFTGNFVIDENILKEEGIEN 291

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score =  159 bits (404), Expect = 6e-48
 Identities = 58/257 (22%), Positives = 97/257 (37%), Gaps = 23/257 (8%)

Query: 1   MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
            +A+V+GG  G+G ATV  L   G  V        +  A   E    G +      +++S
Sbjct: 31  ASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADE---LGNRAEFVSTNVTS 87

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMST-----VSSTNFESVFH 115
            +     IE    +       ++ +      +  V                       ++
Sbjct: 88  EDSVLAAIEAANQLG-RLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYN 146

Query: 116 LSQLAHPLFKAS------GNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA 169
           +++L      A+        G++V  +S+ G  G    + Y A K  +  LT   A + +
Sbjct: 147 VARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAAKAGVIGLTIAAARDLS 206

Query: 170 KDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPI-GRAGEPDEVSSLVAFLCL 228
              IR NT+AP  +KT +++   E     E L   A   P   R G PDE +   AFL  
Sbjct: 207 SAGIRVNTIAPGTMKTPIMESVGE-----EALAKFAANIPFPKRLGTPDEFADAAAFLL- 260

Query: 229 PAASYITGQIICVDGGV 245
               YI G+++ +DG  
Sbjct: 261 -TNGYINGEVMRLDGAQ 276

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score =  150 bits (380), Expect = 3e-45
 Identities = 48/241 (19%), Positives = 84/241 (34%), Gaps = 43/241 (17%)

Query: 1   MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
           M  L+ G +  +G A  E L +  A V T  R+  ++                   D+++
Sbjct: 4   MKILLIGASGTLGSAVKERLEK-KAEVITAGRHSGDV-----------------TVDITN 45

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
            +  +K+ E V     GK++ +++    A   P  ++T E  +   S+      +L  L 
Sbjct: 46  IDSIKKMYEQV-----GKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLG 100

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
                    GS    + +     I   +      GA+    K+ A E  +  IR NTV+P
Sbjct: 101 IDSLND--KGSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEMPR-GIRINTVSP 157

Query: 181 WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
            V++ S         +   F +G     P  +     E S              TG+   
Sbjct: 158 NVLEESW-------DKLEPFFEG-FLPVPAAKVARAFEKS---------VFGAQTGESYQ 200

Query: 241 V 241
           V
Sbjct: 201 V 201

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score =  148 bits (376), Expect = 3e-44
 Identities = 54/239 (22%), Positives = 98/239 (41%), Gaps = 19/239 (7%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            A+VTG T G+G   V++L+R   +     RN   L A           V     D+   
Sbjct: 7   IAVVTGATGGMGIEIVKDLSRDHIVY-ALGRNPEHLAALAEI-----EGVEPIESDIVKE 60

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
              E  ++ + ++    ++ L++ AA+A        +  +       N      LS+   
Sbjct: 61  VLEEGGVDKLKNL--DHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLL 118

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P  +A  +G +++I+S  G    P  ++Y A K A+  L      E A + IR +TV+P 
Sbjct: 119 PALRA-ASGCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPG 177

Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFL-CLPAASYITGQII 239
              T M++   +  +G+ F   I          EP E+++ + F+      + IT   +
Sbjct: 178 PTNTPMLQGLMD-SQGTNFRPEI--------YIEPKEIANAIRFVIDAGETTQITNVDV 227

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score =  148 bits (377), Expect = 4e-44
 Identities = 62/258 (24%), Positives = 109/258 (42%), Gaps = 24/258 (9%)

Query: 1   MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
           + A++TGG  G+G AT E L   GA            +A+  +    G     +  D++S
Sbjct: 13  LVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKK---LGNNCVFAPADVTS 69

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDI------TAEDMSTVSSTNFESVF 114
            +  +  +      F G++++ +N A IA    T ++      T ED   V   N    F
Sbjct: 70  EKDVQTALALAKGKF-GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTF 128

Query: 115 HLSQLAHPLFKAS------GNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEW 168
           ++ +L       +        G I+  +SV    G    + Y A KG +  +T  +A + 
Sbjct: 129 NVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDL 188

Query: 169 AKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPI-GRAGEPDEVSSLVAFLC 227
           A   IR  T+AP +  T ++    E     +  + +A Q P   R G+P E + LV  + 
Sbjct: 189 APIGIRVMTIAPGLFGTPLLTSLPE-----KVCNFLASQVPFPSRLGDPAEYAHLVQAII 243

Query: 228 LPAASYITGQIICVDGGV 245
                ++ G++I +DG +
Sbjct: 244 --ENPFLNGEVIRLDGAI 259

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score =  149 bits (377), Expect = 9e-44
 Identities = 57/241 (23%), Positives = 96/241 (39%), Gaps = 14/241 (5%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            A+VTGG  GIG AT  E AR GA +     +Q  L+  ++  + +GF   G VCD+   
Sbjct: 33  AAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHL 92

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           ++  +L +    +  G ++++ +NA I    P   +  +D   V   +     H  +   
Sbjct: 93  DEMVRLADEAFRLL-GGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFL 151

Query: 122 PLFKASGN-GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
           P     G  G I F +S  G+     +  YG  K  +  L + LA E   + I  + + P
Sbjct: 152 PRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCP 211

Query: 181 WVIKTSMIKPFEEGP-----EGSEFLDGIARQTPIGRAGEPDEVSSLVA-------FLCL 228
            V++T ++   E          +              +   D+V+ L A          L
Sbjct: 212 MVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTADAILANRLYIL 271

Query: 229 P 229
           P
Sbjct: 272 P 272

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score =  146 bits (372), Expect = 2e-43
 Identities = 59/255 (23%), Positives = 101/255 (39%), Gaps = 22/255 (8%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             +VTG + G+G A    LA+ GA V          +    E    G  V     D+++ 
Sbjct: 9   VFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAE---LGAAVRFRNADVTNE 65

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD----ITAEDMSTVSSTNFESVFHLS 117
                 +      F G ++ L+N A  A  +  +        +  +   + N    F++ 
Sbjct: 66  ADATAALAFAKQEF-GHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMI 124

Query: 118 QLAHPLFKAS------GNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKD 171
           +LA  +            G IV  +S+    G    + Y A KG +  LT   A E A+ 
Sbjct: 125 RLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTLPAARELARF 184

Query: 172 NIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPI-GRAGEPDEVSSLVAFLCLPA 230
            IR  T+AP +  T M+    +     +  D +A   P   R G  +E ++LV  +C   
Sbjct: 185 GIRVVTIAPGIFDTPMMAGMPQ-----DVQDALAASVPFPPRLGRAEEYAALVKHIC--E 237

Query: 231 ASYITGQIICVDGGV 245
            + + G++I +DG +
Sbjct: 238 NTMLNGEVIRLDGAL 252

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score =  145 bits (369), Expect = 6e-43
 Identities = 59/257 (22%), Positives = 102/257 (39%), Gaps = 28/257 (10%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            A+VTGG  G+G AT + L   GA V        ++ A L      G +   +  D++  
Sbjct: 11  VAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADL------GDRARFAAADVTDE 64

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD----ITAEDMSTVSSTNFESVFHLS 117
                 ++   ++  G L I++N A        +      +      +   N    F++ 
Sbjct: 65  AAVASALDLAETM--GTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVL 122

Query: 118 QLA-------HPLFKASGN-GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA 169
           +LA        P+   +   G I+  +SV    G    + Y A KG +  +T  +A + A
Sbjct: 123 RLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLA 182

Query: 170 KDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPI-GRAGEPDEVSSLVAFLCL 228
              IR  T+AP +  T ++    E     E    + +Q P   R G PDE  +L   +  
Sbjct: 183 SHRIRVMTIAPGLFDTPLLASLPE-----EARASLGKQVPHPSRLGNPDEYGALAVHII- 236

Query: 229 PAASYITGQIICVDGGV 245
                + G++I +DG +
Sbjct: 237 -ENPMLNGEVIRLDGAI 252

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score =  147 bits (373), Expect = 6e-43
 Identities = 63/259 (24%), Positives = 104/259 (40%), Gaps = 26/259 (10%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIV----------HTCSRNQIELDARLHEWKNKGFKV 51
             +VTG   GIG A     A  GA V           + +       + + E    G + 
Sbjct: 29  VVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEA 88

Query: 52  TGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFE 111
                +++  +Q   LI+T    F G L++L+NNA I   +   + + E+   V + + +
Sbjct: 89  VADGSNVADWDQAAGLIQTAVETF-GGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLK 147

Query: 112 SVFHLSQLAHPLFKASGN------GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLA 165
             F   + A   ++          G I+  SS  G++G      Y A K  +  LT   A
Sbjct: 148 GHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGIATLTLVGA 207

Query: 166 CEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAF 225
            E  +  +  N +AP   +T M +          F + +A Q     A  P+ VS LV +
Sbjct: 208 AEMGRYGVTVNAIAP-SARTRMTETV--------FAEMMATQDQDFDAMAPENVSPLVVW 258

Query: 226 LCLPAASYITGQIICVDGG 244
           L    A  +TG++  V+GG
Sbjct: 259 LGSAEARDVTGKVFEVEGG 277

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  146 bits (370), Expect = 6e-43
 Identities = 48/191 (25%), Positives = 78/191 (40%), Gaps = 4/191 (2%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             L+TG   GIG  T  E A+  + +     N+  L+    + K  G KV   V D S+R
Sbjct: 33  IVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNR 92

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           E      + V +   G ++IL+NNA + +           +      N  + F  ++   
Sbjct: 93  EDIYSSAKKVKAEI-GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFL 151

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA---KDNIRTNTV 178
           P    + +G IV ++S  G   +P +  Y + K A     K L  E A      ++T  +
Sbjct: 152 PAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCL 211

Query: 179 APWVIKTSMIK 189
            P  + T  IK
Sbjct: 212 CPNFVNTGFIK 222

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score =  142 bits (361), Expect = 5e-42
 Identities = 59/255 (23%), Positives = 97/255 (38%), Gaps = 32/255 (12%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           +ALVTGG  G+G A    L   G  V      +   D    E             D++  
Sbjct: 4   SALVTGGASGLGRAAALALKARGYRVVVLDLRREGEDLIYVE------------GDVTRE 51

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD----ITAEDMSTVSSTNFESVFHLS 117
           E   + +       +  L  +++ A +   +  +        E    V   N    F++ 
Sbjct: 52  EDVRRAVARAQE--EAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVL 109

Query: 118 QLAHPLFKAS------GNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKD 171
           +LA    + +        G IV  +SV    G    + Y A KG +  LT   A E A  
Sbjct: 110 RLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGW 169

Query: 172 NIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPI-GRAGEPDEVSSLVAFLCLPA 230
            IR  TVAP +  T +++   E     +    +A Q P   R G P+E ++LV  +    
Sbjct: 170 GIRVVTVAPGLFDTPLLQGLPE-----KAKASLAAQVPFPPRLGRPEEYAALVLHIL--E 222

Query: 231 ASYITGQIICVDGGV 245
              + G+++ +DG +
Sbjct: 223 NPMLNGEVVRLDGAL 237

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score =  141 bits (357), Expect = 2e-41
 Identities = 55/230 (23%), Positives = 88/230 (38%), Gaps = 22/230 (9%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             L+TG +RGIG AT   L   G  V   +R++     RL     +         D+   
Sbjct: 7   AVLITGASRGIGEATARLLHAKGYRVGLMARDE----KRLQALAAELEGALPLPGDVREE 62

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
               + +  +   F G+L+ L+NNA +  +KP  ++T E+   V  TN    F   + A 
Sbjct: 63  GDWARAVAAMEEAF-GELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAV 121

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P     G G+IV + S+ G       + Y A K  +  L      +  + N+R   V P 
Sbjct: 122 PALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPG 181

Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLC-LPA 230
            + T              F      Q       +P++V+  V F   +P 
Sbjct: 182 SVDT-------------GFAGNTPGQA---WKLKPEDVAQAVLFALEMPG 215

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  140 bits (355), Expect = 1e-40
 Identities = 45/191 (23%), Positives = 73/191 (38%), Gaps = 5/191 (2%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG-FKVTGSVCDLSS 60
             +VTG ++GIG      LA+ GA V   +R++  L   +      G          +  
Sbjct: 30  KVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMED 89

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
               E+ +     +  G L++LI N                +      NF S   L+  A
Sbjct: 90  MTFAEQFVAQAGKLM-GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAA 148

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKD--NIRTNTV 178
            P+ K S  GSIV +SS+ G    P V+ Y A K A++    ++  E++    N+     
Sbjct: 149 LPMLKQSN-GSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLC 207

Query: 179 APWVIKTSMIK 189
              +I T    
Sbjct: 208 VLGLIDTETAM 218

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score =  133 bits (337), Expect = 8e-39
 Identities = 33/190 (17%), Positives = 63/190 (33%), Gaps = 16/190 (8%)

Query: 1   MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
           M  L+TG T G+G A    L   G  +    R    L     E             DL+ 
Sbjct: 1   MRVLITGATGGLGGAFARALK--GHDLLLSGRRAGALAELARE-----VGARALPADLAD 53

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
             + + L+E       G L++L++    A      +   + +  + + +  +   +    
Sbjct: 54  ELEAKALLEEA-----GPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVL--- 105

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
               +       VF  +      +P  + Y A KGA+    +    E  ++ +    V  
Sbjct: 106 -KHARFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRL 164

Query: 181 WVIKTSMIKP 190
             + T +  P
Sbjct: 165 PAVATGLWAP 174

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score =  136 bits (344), Expect = 1e-38
 Identities = 55/237 (23%), Positives = 95/237 (40%), Gaps = 16/237 (6%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELD--ARLHEWKNKGFKVTGSVCDLS 59
           TA VTGG  G+G   V +L   G  V      Q  +D      E +  G +V G   D++
Sbjct: 10  TAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVA 69

Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
           SRE  +   + V + F G ++IL NNA +   +P  + + +D   +   N   V +    
Sbjct: 70  SREGFKMAADEVEARF-GPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTT 128

Query: 120 AHPLFKAS------GNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNI 173
             P             G +V  +S+       S  +Y   K A+  L+++L     K  I
Sbjct: 129 FVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESLHYSLLKYEI 188

Query: 174 RTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAG-------EPDEVSSLV 223
             + + P ++K+ +    +  P+  +       +T + R         EPD + + V
Sbjct: 189 GVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPDVIGARV 245

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  138 bits (350), Expect = 1e-37
 Identities = 65/252 (25%), Positives = 104/252 (41%), Gaps = 29/252 (11%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIV---------HTCSRNQIELDARLHEWKNKGFKVT 52
             ++TG   G+G     E A+ GA V         +    N    D  + E    G    
Sbjct: 10  VVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGV-- 67

Query: 53  GSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFES 112
            +V D ++    +K++ET    F G ++++INNA I        +T +D   V   +   
Sbjct: 68  -AVADYNNVLDGDKIVETAVKNF-GTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNG 125

Query: 113 VFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDN 172
            F +++ A P F+    G IV  SS  G+ G    + Y + K A+    + LA E AK N
Sbjct: 126 AFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYASAKSALLGFAETLAKEGAKYN 185

Query: 173 IRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAAS 232
           I+ N +AP + ++ M     E       L+             P++V+ LV +L      
Sbjct: 186 IKANAIAP-LARSRMT----ESIMPPPMLE----------KLGPEKVAPLVLYLSSAEN- 229

Query: 233 YITGQIICVDGG 244
            +TGQ   V  G
Sbjct: 230 ELTGQFFEVAAG 241

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  125 bits (317), Expect = 3e-33
 Identities = 62/245 (25%), Positives = 107/245 (43%), Gaps = 23/245 (9%)

Query: 1   MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI-ELDARLHEWKNKGFKVTGSVCDLS 59
              L+TG   G+G    +  A++GA V     N   +    + E K  G +      D++
Sbjct: 323 KVVLITGAGAGLGKEYAKWFAKYGAKVVV---NDFKDATKTVDEIKAAGGEAWPDQHDVA 379

Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
             +  E +I+ V   + G ++IL+NNA I   +    ++ ++  +V   +    F+LS+L
Sbjct: 380 --KDSEAIIKNVIDKY-GTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRL 436

Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
           A P F     G I+ I+S  G+ G    + Y + K  +  L+K +A E AK+NI+ N VA
Sbjct: 437 AWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVA 496

Query: 180 PWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
           P   +T+M                             D+V+ L+ +L       +TG+  
Sbjct: 497 P-HAETAMTLSIMR--------------EQDKNLYHADQVAPLLVYLGTDDV-PVTGETF 540

Query: 240 CVDGG 244
            + GG
Sbjct: 541 EIGGG 545

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score =  130 bits (330), Expect = 2e-37
 Identities = 38/240 (15%), Positives = 86/240 (35%), Gaps = 24/240 (10%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSS 60
             ++TG + G+G    +     G   +   R++    ++L    N     V     DL+S
Sbjct: 3   LIVITGASSGLGAELAKLYDAEGKATYLTGRSE----SKLSTVTNCLSNNVGYRARDLAS 58

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
            ++ E+L E +        + ++++A   +     +   E + T+   N  S  ++ +  
Sbjct: 59  HQEVEQLFEQL----DSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLREL 114

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
              +K     ++V I S    +     S Y A K A+  L +++  E     ++   V P
Sbjct: 115 VKRYKDQP-VNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYP 173

Query: 181 WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAF-LCLPAASYITGQII 239
                        G   +EF +   +          ++ + ++   L      Y++   +
Sbjct: 174 -------------GGMATEFWETSGKSLDTSSFMSAEDAALMIHGALANIGNGYVSDITV 220

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score =  132 bits (334), Expect = 3e-37
 Identities = 63/252 (25%), Positives = 103/252 (40%), Gaps = 29/252 (11%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIV---------HTCSRNQIELDARLHEWKNKGFKVT 52
             LVTG   G+G A     A  GA+V             +     D  + E + +G K  
Sbjct: 11  VVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGK-- 68

Query: 53  GSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFES 112
            +V +  S E  EKL++T    F G++++++NNA I   +    I+ ED   +   +   
Sbjct: 69  -AVANYDSVEAGEKLVKTALDTF-GRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRG 126

Query: 113 VFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDN 172
            F +++ A    K    G I+  +S  G+ G    + Y A K  +  L   L  E  K+N
Sbjct: 127 SFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGRKNN 186

Query: 173 IRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAAS 232
           I  NT+AP    + M     E     + ++ +           P+ V+ LV +LC  +  
Sbjct: 187 IHCNTIAP-NAGSRMT----ETVMPEDLVEALK----------PEYVAPLVLWLCHESC- 230

Query: 233 YITGQIICVDGG 244
              G +  V  G
Sbjct: 231 EENGGLFEVGAG 242

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score =  126 bits (319), Expect = 9e-36
 Identities = 55/231 (23%), Positives = 95/231 (41%), Gaps = 19/231 (8%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE-WKNKGFKVTGSVCDLSS 60
            A++TG +RGIG A    LAR G  +   +R+   L+   HE  + +G +V     D+S 
Sbjct: 4   VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSK 63

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
            E  E+  + V   F G +++++ NA + + K   +++ E+   +   N   V+   +  
Sbjct: 64  AESVEEFSKKVLERF-GDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAF 122

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
               K +G  ++V  S V   R IP    Y + K A   L +    E    ++R   + P
Sbjct: 123 LDSLKRTGGLALVTTSDVSA-RLIPYGGGYVSTKWAARALVRTFQIE--NPDVRFFELRP 179

Query: 181 WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAF-LCLPA 230
             + T              F      +       +PDE++  V   L LP 
Sbjct: 180 GAVDT-------------YFGGSKPGKPKEKGYLKPDEIAEAVRCLLKLPK 217

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score =  123 bits (311), Expect = 2e-34
 Identities = 49/209 (23%), Positives = 86/209 (41%), Gaps = 22/209 (10%)

Query: 2   TALVTGGTRGIGHATVEELARF---GAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDL 58
           + L+TG  RG+G   V+ L         + T  RN+ +    L +       +     DL
Sbjct: 23  SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE-LEDLAKNHSNIHILEIDL 81

Query: 59  SSREQREKLIETVTSIFQG-KLNILINNAAIAFVKPTV-DITAEDMSTVSSTNFESVFHL 116
            + +  +KL+  +  + +   LN+L NNA IA     +  + ++++     TN      L
Sbjct: 82  RNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIML 141

Query: 117 SQLAHPLFKAS-----------GNGSIVFISSVGG---VRGIPSVSLYGAYKGAMNQLTK 162
           ++   PL K +           G  +I+ +SS+ G         +  Y   K A+N  TK
Sbjct: 142 AKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATK 201

Query: 163 NLACEWAKDNIRTNTVAP-WVIKTSMIKP 190
           +L+ +     I   ++ P WV KT M   
Sbjct: 202 SLSVDLYPQRIMCVSLHPGWV-KTDMGGS 229

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score =  121 bits (307), Expect = 6e-34
 Identities = 47/182 (25%), Positives = 84/182 (46%), Gaps = 7/182 (3%)

Query: 1   MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLS 59
           M  LVTG T G G        + G  V    R Q     RL E K++ G  +  +  D+ 
Sbjct: 1   MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQ----ERLQELKDELGDNLYIAQLDVR 56

Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQ 118
           +R   E+++ ++ + +   ++IL+NNA +A  ++P    + ED  T+  TN + + ++++
Sbjct: 57  NRAAIEEMLASLPAEW-CNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTR 115

Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
              P      +G I+ I S  G       ++YGA K  + Q + NL  +     +R   +
Sbjct: 116 AVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDI 175

Query: 179 AP 180
            P
Sbjct: 176 EP 177

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score =  118 bits (298), Expect = 2e-32
 Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 2/184 (1%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            AL+TG + GIG AT   LA  GA V   +R   +L A   E    G KV     D++ R
Sbjct: 9   VALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADR 68

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           +  +  + +      G L+IL+NNA I  + P  D    D + +  TN   + ++++ A 
Sbjct: 69  QGVDAAVASTVEAL-GGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAAL 127

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P       G++V +SS+ G   + + ++Y A K  +N  ++ L  E  +  +R   + P 
Sbjct: 128 PHLLR-SKGTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPG 186

Query: 182 VIKT 185
              T
Sbjct: 187 TTDT 190

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score =  118 bits (298), Expect = 2e-32
 Identities = 42/184 (22%), Positives = 77/184 (41%), Gaps = 7/184 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             ++TG + GIG A     +  G  +   +R       RL            +  D++ +
Sbjct: 18  LVVITGASSGIGEAIARRFSEEGHPLLLLARRV----ERLKALNLP--NTLCAQVDVTDK 71

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
              +  I     I+ G  + ++NNA +  +       A +   +   N   + +  Q   
Sbjct: 72  YTFDTAITRAEKIY-GPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVL 130

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
              KA   G+I+ ISS+ G +  P  + Y   K A++ +++N+  E A  N+R  T+AP 
Sbjct: 131 APMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPS 190

Query: 182 VIKT 185
            +KT
Sbjct: 191 AVKT 194

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score =  116 bits (294), Expect = 7e-32
 Identities = 46/184 (25%), Positives = 86/184 (46%), Gaps = 3/184 (1%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             L+TG + GIG     EL   GA +   +R Q  ++A   E ++ G      V D++ R
Sbjct: 6   VILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDR 65

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
                  +     + G++++L+NNA +  + P   +  ++   +   N + V        
Sbjct: 66  HSVAAFAQAAVDTW-GRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVL 124

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P+ +A  +G I+ I S+G +  +P+ ++Y A K A+  ++  L  E    NIR   V P 
Sbjct: 125 PIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQE--STNIRVTCVNPG 182

Query: 182 VIKT 185
           V+++
Sbjct: 183 VVES 186

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score =  116 bits (292), Expect = 1e-31
 Identities = 48/212 (22%), Positives = 81/212 (38%), Gaps = 27/212 (12%)

Query: 2   TALVTGGTRGIGHATVEELARFGAI--VHTCSRNQIELDARLHEWKNKGFKVTGSVCDLS 59
           + +VTG  RGIG   V++L +   I  +   +R+  +    L   K+    V      ++
Sbjct: 5   SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATE-LKSIKDSRVHVL--PLTVT 61

Query: 60  SREQREKLIETVTSIFQG-KLNILINNAAIAFVKPTV-DITAEDMSTVSSTNFESVFHLS 117
             +  +  +  V  I     L++LINNA +     T  +     ++     N  SV  L+
Sbjct: 62  CDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLT 121

Query: 118 QLAHPLFKAS-----------GNGSIVFISSVGG-------VRGIPSVSLYGAYKGAMNQ 159
           Q   PL K +              +++ ISS  G             V  Y   K A+N 
Sbjct: 122 QKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINM 181

Query: 160 LTKNLACEWAKDNIRTNTVAP-WVIKTSMIKP 190
             + LA +   DN+      P WV +T++   
Sbjct: 182 FGRTLAVDLKDDNVLVVNFCPGWV-QTNLGGK 212

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score =  116 bits (294), Expect = 1e-31
 Identities = 49/186 (26%), Positives = 77/186 (41%), Gaps = 4/186 (2%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           T  +TG T G G A     A  G  +    R +  L A L    +   +V     D+  R
Sbjct: 23  TLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQA-LAGELSAKTRVLPLTLDVRDR 81

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
                 ++ +   F   L  LINNA +A    P      +D  T+  TN + + + ++L 
Sbjct: 82  AAMSAAVDNLPEEF-ATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLL 140

Query: 121 HPLFKASGNGS-IVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
            P   A G G+ IV + SV G    P   +YG  K  + Q + NL C+     +R   + 
Sbjct: 141 LPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLE 200

Query: 180 PWVIKT 185
           P + ++
Sbjct: 201 PGLCES 206

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score =  121 bits (304), Expect = 2e-31
 Identities = 64/252 (25%), Positives = 101/252 (40%), Gaps = 29/252 (11%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIV---------HTCSRNQIELDARLHEWKNKGFKVT 52
            A+VTG   G+G       A  GA V              +Q   D  + E +  G +  
Sbjct: 21  VAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGE-- 78

Query: 53  GSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFES 112
            +V D +S     K+IET    F G+++IL+NNA I   +  V  + +D + V+  + + 
Sbjct: 79  -AVADYNSVIDGAKVIETAIKAF-GRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKG 136

Query: 113 VFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDN 172
            F  +Q A P  K    G I+  SS  G+ G      Y A K  +  L   +A E A++N
Sbjct: 137 SFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLANTVAIEGARNN 196

Query: 173 IRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAAS 232
           +  N + P    + M     EG       +            +P  ++ +VA+LC  +  
Sbjct: 197 VLCNVIVP-TAASRMT----EGILPDILFN----------ELKPKLIAPVVAYLCHESCE 241

Query: 233 YITGQIICVDGG 244
              G  I    G
Sbjct: 242 -DNGSYIESAAG 252

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score =  114 bits (287), Expect = 1e-30
 Identities = 55/191 (28%), Positives = 89/191 (46%), Gaps = 9/191 (4%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHT---CSRNQ---IELDARLHEWKNKGFKVTGSV 55
           T L+TG + GIG AT  E              +R      EL   + + +    KV  + 
Sbjct: 35  TVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQ-EFPNAKVHVAQ 93

Query: 56  CDLSSREQREKLIETVTSIFQGKLNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVF 114
            D++  E+ +  IE +   F   ++IL+NNA  A        I  ED+  V  TN  ++ 
Sbjct: 94  LDITQAEKIKPFIENLPQEF-KDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALI 152

Query: 115 HLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIR 174
           +++Q   P+F+A  +G IV + S+ G    P+ S+Y A K A+   T +L  E     IR
Sbjct: 153 NITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTDSLRKELINTKIR 212

Query: 175 TNTVAPWVIKT 185
              +AP +++T
Sbjct: 213 VILIAPGLVET 223

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score =  112 bits (282), Expect = 6e-30
 Identities = 53/192 (27%), Positives = 89/192 (46%), Gaps = 9/192 (4%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF--KVTGSVCDLS 59
            ALVTG + GIG A    L + G  V  C+R    ++    E K+ G+   +    CDLS
Sbjct: 34  LALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLS 93

Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
           + E    +   + S     ++I INNA +A     +  +      + + N  ++   ++ 
Sbjct: 94  NEEDILSMFSAIRSQH-SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTRE 152

Query: 120 AHPLFKASG--NGSIVFISSVGGVRGIP--SVSLYGAYKGAMNQLTKNLACEW--AKDNI 173
           A+   K     +G I+ I+S+ G R +P      Y A K A+  LT+ L  E   A+ +I
Sbjct: 153 AYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQTHI 212

Query: 174 RTNTVAPWVIKT 185
           R   ++P V++T
Sbjct: 213 RATCISPGVVET 224

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score =  110 bits (276), Expect = 4e-29
 Identities = 50/185 (27%), Positives = 81/185 (43%), Gaps = 4/185 (2%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             LVTG + G G A  E     G  V   +R    LD  L        +      D++  
Sbjct: 7   VWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDD-LVAAYPDRAEAI--SLDVTDG 63

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           E+ + +   V + + G++++L+NNA    V    + T  ++  +   +      L++   
Sbjct: 64  ERIDVVAADVLARY-GRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALL 122

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P  +  G+GS+V ISS GG       S Y A K A+ QL++ LA E A   I+   V P 
Sbjct: 123 PQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPG 182

Query: 182 VIKTS 186
             +T+
Sbjct: 183 AFRTN 187

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score =  108 bits (272), Expect = 4e-28
 Identities = 49/236 (20%), Positives = 88/236 (37%), Gaps = 21/236 (8%)

Query: 2   TALVTGGTRGIGHATVEELARF---GAIVHTCSRN---QIELDARLHEWKNKGFKVTGSV 55
             L+TG + GIG      LA        V+   R+   Q  L             +    
Sbjct: 4   VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQ 63

Query: 56  CDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFH 115
            D+   +      E VT   +G++++L+ NA +  + P   +  + +++V   N      
Sbjct: 64  LDVRDSKSVAAARERVT---EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVR 120

Query: 116 LSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
           + Q   P  K  G+G ++   SVGG+ G+P   +Y A K A+  L ++LA       +  
Sbjct: 121 MLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHL 180

Query: 176 NTVAPWVIKTSM----------IKPFEEGPEGSEFLDGIAR--QTPIGRAGEPDEV 219
           + +    + T+           +    +      F   +A   Q     A  P+EV
Sbjct: 181 SLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEV 236

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score =  107 bits (269), Expect = 9e-28
 Identities = 45/192 (23%), Positives = 84/192 (43%), Gaps = 7/192 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE-----WKNKGFKVTGSVC 56
             L+TG + G G  T E LA  G  V+   R+ +  +A   E      ++    +     
Sbjct: 7   IILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLEL 66

Query: 57  DLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHL 116
           D+ S+   ++ I+ +     G++++LI+NA      P    T E  + +   N  S   +
Sbjct: 67  DVQSQVSVDRAIDQIIGED-GRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRV 125

Query: 117 SQLAHPLFKASGNGSIVFISSVGGVRGI-PSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
           ++ A P  +   +G +++ISS     G  P ++ Y A K AM+ +    A E ++  I T
Sbjct: 126 NRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAPYFAAKAAMDAIAVQYARELSRWGIET 185

Query: 176 NTVAPWVIKTSM 187
           + + P    +  
Sbjct: 186 SIIVPGAFTSGT 197

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score =  105 bits (265), Expect = 1e-27
 Identities = 57/244 (23%), Positives = 86/244 (35%), Gaps = 54/244 (22%)

Query: 2   TALVTGGTRGIGHATVEELA-RFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
            ALVTGG +GIG A V +L   F   V   +R+     A + + + +G        D+  
Sbjct: 6   VALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDD 65

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
            +    L + +   + G L++L+NNA IAF                 TNF     +    
Sbjct: 66  LQSIRALRDFLRKEY-GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTEL 124

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSL------------------------------- 149
            PL K    G +V +SS+  VR + S S                                
Sbjct: 125 LPLIKPQ--GRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGV 182

Query: 150 ----------YGAYKGAMNQLTKNLACEWAK----DNIRTNTVAPWVIKTSM-----IKP 190
                     YG  K  +  L++  A + ++    D I  N   P  ++T M      K 
Sbjct: 183 HQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKATKS 242

Query: 191 FEEG 194
            EEG
Sbjct: 243 PEEG 246

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score = 93.5 bits (232), Expect = 1e-22
 Identities = 56/273 (20%), Positives = 89/273 (32%), Gaps = 83/273 (30%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF-KVTGSVCDLSS 60
            A+VTGG +GIG    ++L+  G +V    R+  +    + + KN     V     D++ 
Sbjct: 14  CAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTD 73

Query: 61  REQ-REKLIETVTSIFQGKLNILINNAAIAFVKPTVD----------------------- 96
                  L + + + F GKL+IL+NNA +A      D                       
Sbjct: 74  PIATMSSLADFIKTHF-GKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKP 132

Query: 97  -------ITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPS--- 146
                   T E        N+  V  ++++  PL + S +  IV +SS  G     S   
Sbjct: 133 EAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYVSNET 192

Query: 147 ----------------------------------------VSLYGAYKGAMNQLTKNLAC 166
                                                    + Y   K  +N  T+ LA 
Sbjct: 193 ALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRVLAN 252

Query: 167 EWAKDNIRTNTVAPWVIKTSMIKPF-----EEG 194
           +      + N V P ++KT M         EEG
Sbjct: 253 KI--PKFQVNCVCPGLVKTEMNYGIGNYTAEEG 283

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* Length = 265

 Score = 89.5 bits (223), Expect = 2e-21
 Identities = 41/204 (20%), Positives = 92/204 (45%), Gaps = 23/204 (11%)

Query: 56  CDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFE---- 111
           CD++     + +   +  ++  K +  ++  +I F  P   +  + ++ V+   F+    
Sbjct: 66  CDVAEDASIDTMFAELGKVW-PKFDGFVH--SIGFA-PGDQLDGDYVNAVTREGFKIAHD 121

Query: 112 -SVF---HLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACE 167
            S +    +++    +       +++ +S +G  R IP+ ++ G  K ++    + +A  
Sbjct: 122 ISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANA 179

Query: 168 WAKDNIRTNTVAPWVIKT---SMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVA 224
              + +R N ++   I+T   S IK F       + L      TPI R    ++V +  A
Sbjct: 180 MGPEGVRVNAISAGPIRTLAASGIKDF------RKMLAHCEAVTPIRRTVTIEDVGNSAA 233

Query: 225 FLCLPAASYITGQIICVDGGVTVT 248
           FLC   ++ I+G+++ VDGG ++ 
Sbjct: 234 FLCSDLSAGISGEVVHVDGGFSIA 257

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 2jjy_A* Length = 280

 Score = 89.2 bits (222), Expect = 2e-21
 Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 22/204 (10%)

Query: 56  CDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFE---- 111
           CD+ S ++ + L   +  ++   L+ +++  +IAF  P   +    +  V+   F     
Sbjct: 82  CDVISDQEIKDLFVELGKVW-DGLDAIVH--SIAFA-PRDQLEGNFIDCVTREGFSIAHD 137

Query: 112 -SVF---HLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACE 167
            S +    L++    + K     S+V ++ +G  + +PS +  G  K ++    +  A  
Sbjct: 138 ISAYSFAALAKEGRSMMKNRN-ASMVALTYIGAEKAMPSYNTMGVAKASLEATVRYTALA 196

Query: 168 WAKDNIRTNTVAPWVIKT---SMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVA 224
             +D I+ N V+   IKT   S I  F       + LD  A  +P+ +  +  EV + VA
Sbjct: 197 LGEDGIKVNAVSAGPIKTLAASGISNF------KKMLDYNAMVSPLKKNVDIMEVGNTVA 250

Query: 225 FLCLPAASYITGQIICVDGGVTVT 248
           FLC   A+ ITG+++ VD G    
Sbjct: 251 FLCSDMATGITGEVVHVDAGYHCV 274

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* Length = 261

 Score = 88.4 bits (220), Expect = 4e-21
 Identities = 51/205 (24%), Positives = 91/205 (44%), Gaps = 26/205 (12%)

Query: 56  CDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVK------PTVDITAEDMST---VS 106
            D++  E+ + L   V   F G L+ L++  AIAF          +D   +D      VS
Sbjct: 65  ADVTQDEELDALFAGVKEAF-GGLDYLVH--AIAFAPREAMEGRYIDTRRQDWLLALEVS 121

Query: 107 STNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLAC 166
           + +  +   +++ A PL +    G IV ++     + +P  ++    K A+    + LA 
Sbjct: 122 AYSLVA---VARRAEPLLRE--GGGIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAY 176

Query: 167 EWAKDNIRTNTVAPWVIKT---SMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLV 223
           E     +R N ++   ++T     I  F      ++  D +A+  P+ R    +EV +L 
Sbjct: 177 ELGPKGVRVNAISAGPVRTVAARSIPGF------TKMYDRVAQTAPLRRNITQEEVGNLG 230

Query: 224 AFLCLPAASYITGQIICVDGGVTVT 248
            FL  P AS ITG+++ VD G  + 
Sbjct: 231 LFLLSPLASGITGEVVYVDAGYHIM 255

>4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH]; oxidoreductase, short-chain dehydrogenase/reductase superfam fatty acid biosynthesis; HET: NAP E9P GLU; 1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A* 4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A* Length = 282

 Score = 88.1 bits (219), Expect = 7e-21
 Identities = 47/201 (23%), Positives = 82/201 (40%), Gaps = 26/201 (12%)

Query: 56  CDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVK------PTVDITAEDMST---VS 106
            D+ S E+     E +     G ++ + +  +IAF           + + E       +S
Sbjct: 91  IDVQSDEEVINGFEQIGKDV-GNIDGVYH--SIAFANMEDLRGRFSETSREGFLLAQDIS 147

Query: 107 STNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLAC 166
           S +      ++  A  L      GSIV  + +GG   + + ++ G  K ++    K LA 
Sbjct: 148 SYSLTI---VAHEAKKLMPE--GGSIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLAL 202

Query: 167 EWAKDNIRTNTVAPWVIKT---SMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLV 223
           +   DNIR N ++   I+T     +  F      +  L  I  + P+ R  +  EV    
Sbjct: 203 DLGPDNIRVNAISAGPIRTLSAKGVGGF------NTILKEIEERAPLKRNVDQVEVGKTA 256

Query: 224 AFLCLPAASYITGQIICVDGG 244
           A+L    +S +TG+ I VD G
Sbjct: 257 AYLLSDLSSGVTGENIHVDSG 277

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} Length = 271

 Score = 87.6 bits (218), Expect = 9e-21
 Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 23/204 (11%)

Query: 56  CDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFE---- 111
           CD++   Q + L  ++ + +   L+ L++  +I F  P   I  + +  ++  NF     
Sbjct: 71  CDVADDAQIDALFASLKTHW-DSLDGLVH--SIGFA-PREAIAGDFLDGLTRENFRIAHD 126

Query: 112 -SVF---HLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACE 167
            S +    L++ A P+     + S++ +S +G  R IP+ +  G  K A+    + LA  
Sbjct: 127 ISAYSFPALAKAALPMLSD--DASLLTLSYLGAERAIPNYNTMGLAKAALEASVRYLAVS 184

Query: 168 WAKDNIRTNTVAPWVIKT---SMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVA 224
                +R N ++   IKT   S IK F       + LD +   +P+ R    ++V +  A
Sbjct: 185 LGAKGVRVNAISAGPIKTLAASGIKSF------GKILDFVESNSPLKRNVTIEQVGNAGA 238

Query: 225 FLCLPAASYITGQIICVDGGVTVT 248
           FL    AS +T +++ VD G    
Sbjct: 239 FLLSDLASGVTAEVMHVDSGFNAV 262

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* Length = 266

 Score = 87.2 bits (217), Expect = 1e-20
 Identities = 49/205 (23%), Positives = 92/205 (44%), Gaps = 26/205 (12%)

Query: 56  CDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVK------PTVDITAEDMST---VS 106
           CD+++  + E    ++     G ++ + +   IAF          ++   +       +S
Sbjct: 66  CDVTNDAEIETCFASIKEQV-GVIHGIAH--CIAFANKEELVGEYLNTNRDGFLLAHNIS 122

Query: 107 STNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLAC 166
           S +  +   + + A P+      GSIV ++ +GG   +P+ ++ G  K +++   K LA 
Sbjct: 123 SYSLTA---VVKAARPMMTE--GGSIVTLTYLGGELVMPNYNVMGVAKASLDASVKYLAA 177

Query: 167 EWAKDNIRTNTVAPWVIKT---SMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLV 223
           +  K+NIR N+++   I+T     I  F      +  L  I  + P+ R   P+EV    
Sbjct: 178 DLGKENIRVNSISAGPIRTLSAKGISDF------NSILKDIEERAPLRRTTTPEEVGDTA 231

Query: 224 AFLCLPAASYITGQIICVDGGVTVT 248
           AFL    +  ITG+ + VD G  +T
Sbjct: 232 AFLFSDMSRGITGENLHVDSGFHIT 256

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} Length = 285

 Score = 87.3 bits (217), Expect = 1e-20
 Identities = 48/205 (23%), Positives = 89/205 (43%), Gaps = 25/205 (12%)

Query: 56  CDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVK------PTVDITAEDMST---VS 106
           CD+S  E  + L + +   + G L+I+++  +IA+          +D + E       +S
Sbjct: 78  CDVSLDEDIKNLKKFLEENW-GSLDIIVH--SIAYAPKEEFKGGVIDTSREGFKIAMDIS 134

Query: 107 STNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLAC 166
             +  +   L++   PL +    G+IV +S  G  + +P  ++ G  K A+    + LA 
Sbjct: 135 VYSLIA---LTRELLPLMEGRN-GAIVTLSYYGAEKVVPHYNVMGIAKAALESTVRYLAY 190

Query: 167 EWAKDNIRTNTVAPWVIKT---SMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLV 223
           + AK   R N ++   +KT     I  F         ++   +  P G+    ++V    
Sbjct: 191 DIAKHGHRINAISAGPVKTLAAYSITGF------HLLMEHTTKVNPFGKPITIEDVGDTA 244

Query: 224 AFLCLPAASYITGQIICVDGGVTVT 248
            FLC   A  ITG+++ VD G  + 
Sbjct: 245 VFLCSDWARAITGEVVHVDNGYHIM 269

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* Length = 275

 Score = 86.5 bits (215), Expect = 3e-20
 Identities = 42/205 (20%), Positives = 83/205 (40%), Gaps = 26/205 (12%)

Query: 56  CDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVK------PTVDITAEDMST---VS 106
            D+S  E  + L  +V     G L+ +++  ++AF          ++ +    +T   +S
Sbjct: 63  LDVSKEEHFKSLYNSVKKDL-GSLDFIVH--SVAFAPKEALEGSLLETSKSAFNTAMEIS 119

Query: 107 STNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLAC 166
             +      L+    PL       S++ +S +G  + +   ++ G  K A+    + LA 
Sbjct: 120 VYSLIE---LTNTLKPLLNN--GASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAV 174

Query: 167 EWAKDNIRTNTVAPWVIKT---SMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLV 223
           +  K +IR N ++   I+T   S I  F         L       P+ +    +EV +  
Sbjct: 175 DLGKHHIRVNALSAGPIRTLASSGIADF------RMILKWNEINAPLRKNVSLEEVGNAG 228

Query: 224 AFLCLPAASYITGQIICVDGGVTVT 248
            +L    +S ++G++  VD G  V 
Sbjct: 229 MYLLSSLSSGVSGEVHFVDAGYHVM 253

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* Length = 296

 Score = 85.8 bits (213), Expect = 6e-20
 Identities = 49/205 (23%), Positives = 84/205 (40%), Gaps = 26/205 (12%)

Query: 56  CDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVK------PTVDITAEDMST---VS 106
           CD+S  E  + + + +   + G L+ +++  A+AF          VD +  +  T   +S
Sbjct: 87  CDVSDAESVDNMFKVLAEEW-GSLDFVVH--AVAFSDKNELKGRYVDTSLGNFLTSMHIS 143

Query: 107 STNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLAC 166
             +F     ++  A PL      GSI+ +S  G  + +P  ++ G  K A+    K LA 
Sbjct: 144 CYSFTY---IASKAEPLMT--NGGSILTLSYYGAEKVVPHYNVMGVCKAALEASVKYLAV 198

Query: 167 EWAKDNIRTNTVAPWVIKT---SMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLV 223
           +  K  IR N ++   ++T   S I  F         L      +P+ R    D+V    
Sbjct: 199 DLGKQQIRVNAISAGPVRTLASSGISDF------HYILTWNKYNSPLRRNTTLDDVGGAA 252

Query: 224 AFLCLPAASYITGQIICVDGGVTVT 248
            +L        TG+ + VD G  V 
Sbjct: 253 LYLLSDLGRGTTGETVHVDCGYHVV 277

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* Length = 293

 Score = 85.4 bits (212), Expect = 8e-20
 Identities = 48/205 (23%), Positives = 85/205 (41%), Gaps = 26/205 (12%)

Query: 56  CDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVK------PTVDITAEDMST---VS 106
           CD++     + + ET+   + GKL+ L++  AI F          +D +  + +    +S
Sbjct: 88  CDVADAASIDAVFETLEKKW-GKLDFLVH--AIGFSDKDELTGRYIDTSEANFTNTMLIS 144

Query: 107 STNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLAC 166
             +  +   +S+ A  L      GSI+ ++  G  + +P+ ++ G  K A+    K LA 
Sbjct: 145 VYSLTA---VSRRAEKLMAD--GGSILTLTYYGAEKVMPNYNVMGVAKAALEASVKYLAV 199

Query: 167 EWAKDNIRTNTVAPWVIKT---SMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLV 223
           +    NIR N ++   IKT   S I  F         L       P+ R    DEV  + 
Sbjct: 200 DLGPQNIRVNAISAGPIKTLAASGIGDF------RYILKWNEYNAPLRRTVTIDEVGDVG 253

Query: 224 AFLCLPAASYITGQIICVDGGVTVT 248
            +     +  +TG++   D G  V 
Sbjct: 254 LYFLSDLSRSVTGEVHHADSGYHVI 278

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} Length = 319

 Score = 80.6 bits (199), Expect = 6e-18
 Identities = 46/208 (22%), Positives = 86/208 (41%), Gaps = 26/208 (12%)

Query: 56  CDLSSREQREKLIE-TVTSIFQ------GKLNILINNAAIAF----VKPTVDITAEDMST 104
            ++SS ++   +   T++ + +      G+++IL++  ++A      KP +  + +    
Sbjct: 104 PEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVH--SLANGPEVTKPLLQTSRKGYLA 161

Query: 105 VSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLY----GAYKGAMNQL 160
             S++  S   L Q   PL K    GS + +S +   + IP    Y     + K A+   
Sbjct: 162 AVSSSSYSFVSLLQHFLPLMKE--GGSALALSYIASEKVIPG---YGGGMSSAKAALESD 216

Query: 161 TKNLACEW-AKDNIRTNTVAPWVIKT---SMIKPFEEGPEGSEFLDGIARQTPIGRAGEP 216
            + LA E      +R N ++   +K+   S I    +       +D      P+ +  E 
Sbjct: 217 CRTLAFEAGRARAVRVNCISAGPLKSRAASAIGKAGDKTFIDLAIDYSEANAPLQKELES 276

Query: 217 DEVSSLVAFLCLPAASYITGQIICVDGG 244
           D+V     FL  P A  +TG  + VD G
Sbjct: 277 DDVGRAALFLLSPLARAVTGATLYVDNG 304

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* Length = 315

 Score = 80.6 bits (199), Expect = 6e-18
 Identities = 46/205 (22%), Positives = 81/205 (39%), Gaps = 20/205 (9%)

Query: 56  CDLSSREQREKLIE-TVTSIFQ------GKLNILINNAAIAF----VKPTVDITAEDMST 104
            D+   ++   +   T+  +        G ++IL++  ++A      KP ++ + +    
Sbjct: 91  QDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVH--SLANGPEVTKPLLETSRKGYLA 148

Query: 105 VSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPS-VSLYGAYKGAMNQLTKN 163
            SS +  S   L Q   P+      GS V +S +   R +P       + K A+   T+ 
Sbjct: 149 ASSNSAYSFVSLLQHFGPIMNE--GGSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRT 206

Query: 164 LACEW-AKDNIRTNTVAPWVIKT---SMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEV 219
           LA E   K  +R N ++   +K+   S I    E       +D      P+ R    D+V
Sbjct: 207 LAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEKSFIDYAIDYSYNNAPLRRDLHSDDV 266

Query: 220 SSLVAFLCLPAASYITGQIICVDGG 244
                FL  P A  ++G  + VD G
Sbjct: 267 GGAALFLLSPLARAVSGVTLYVDNG 291

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... Length = 269

 Score = 77.3 bits (191), Expect = 5e-17
 Identities = 51/213 (23%), Positives = 84/213 (39%), Gaps = 28/213 (13%)

Query: 56  CDLSSREQREKLIETVTSIF--QGKLNILINNAAIAFVKPT-------VDITAEDMST-- 104
            D+ + E    L   VT       KL+ +++  +I F+  T        D    D+S   
Sbjct: 63  LDVQNEEHLASLAGRVTEAIGAGNKLDGVVH--SIGFMPQTGMGINPFFDAPYADVSKGI 120

Query: 105 -VSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKN 163
            +S+ ++ S   +++   P+      GSIV +      R +P+ +     K A+  + + 
Sbjct: 121 HISAYSYAS---MAKALLPIMNP--GGSIVGMDF-DPSRAMPAYNWMTVAKSALESVNRF 174

Query: 164 LACEWAKDNIRTNTVAPWVIKT---SMIKPFEEGPEG----SEFLDGIARQTPIGR-AGE 215
           +A E  K  +R+N VA   I+T   S I     G E         +G  ++ PIG    +
Sbjct: 175 VAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKD 234

Query: 216 PDEVSSLVAFLCLPAASYITGQIICVDGGVTVT 248
              V+  V  L        TG II  DGG    
Sbjct: 235 ATPVAKTVCALLSDWLPATTGDIIYADGGAHTQ 267

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* Length = 297

 Score = 76.3 bits (188), Expect = 2e-16
 Identities = 50/199 (25%), Positives = 82/199 (41%), Gaps = 20/199 (10%)

Query: 59  SSREQREKLIETVTSIFQGKLNILINNAAIAF----VKPTVDITAEDMSTVSSTNFESVF 114
           SS    ++  E V   F G ++IL++  ++A      KP ++ + +      S +  S  
Sbjct: 101 SSNWTVQEAAECVRQDF-GSIDILVH--SLANGPEVSKPLLETSRKGYLAAISASSYSFV 157

Query: 115 HLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLY-GAYKGAMNQLTKNLACEW-AKDN 172
            L     P+      G+ + ++ +   R IP       + K A+   T+ LA E   K N
Sbjct: 158 SLLSHFLPIMNP--GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQN 215

Query: 173 IRTNTVAPWVIKT---SMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLP 229
           IR NT++   + +     I   +        ++      PI +    DEV +  AFL  P
Sbjct: 216 IRVNTISAGPLGSRAAKAIGFIDT------MIEYSYNNAPIQKTLTADEVGNAAAFLVSP 269

Query: 230 AASYITGQIICVDGGVTVT 248
            AS ITG  I VD G+   
Sbjct: 270 LASAITGATIYVDNGLNSM 288

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... Length = 329

 Score = 64.9 bits (158), Expect = 2e-12
 Identities = 40/245 (16%), Positives = 84/245 (34%), Gaps = 63/245 (25%)

Query: 56  CDLSSREQREKLIETVTSIFQGKLNILINNAAIAF----VKPTVDITAEDMST---VSST 108
            ++      E +   +   + GK+N+L++  ++A      K  ++ + +        SS 
Sbjct: 92  YNMLQNYTIEDVANLIHQKY-GKINMLVH--SLANAKEVQKDLLNTSRKGYLDALSKSSY 148

Query: 109 NFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLY----GAYKGAMNQLTKNL 164
           +  S   L +    + K     SI+ ++     + +P    Y     + K A+   T+ L
Sbjct: 149 SLIS---LCKYFVNIMK--PQSSIISLTYHASQKVVPG---YGGGMSSAKAALESDTRVL 200

Query: 165 ACEW-AKDNIRTNTVAPWVIKT---SMIKPF----------------------------- 191
           A       NIR NT++   +K+   + I                                
Sbjct: 201 AYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTNQNKNRNRHDVHNIMNNSGEK 260

Query: 192 --------EEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVDG 243
                   +        ++   +  P+ +     ++ S+ +FL    +  ITGQ I VD 
Sbjct: 261 EEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAITGQTIYVDN 320

Query: 244 GVTVT 248
           G+ + 
Sbjct: 321 GLNIM 325

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 63.4 bits (154), Expect = 5e-12
 Identities = 27/143 (18%), Positives = 45/143 (31%), Gaps = 17/143 (11%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            A+V  GT  +G  +   LA  GA V  C R   +  A       + FKV  +  + +  
Sbjct: 121 KAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR-FKVNVTAAETADD 179

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
             R + ++          + +    AI        +        SS    + ++    A 
Sbjct: 180 ASRAEAVKGA--------HFVFTAGAIGL----ELLPQAAWQNESSIEIVADYN----AQ 223

Query: 122 PLFKASGNGSIVFISSVGGVRGI 144
           P     G  +       GG R  
Sbjct: 224 PPLGIGGIDATDKGKEYGGKRAF 246

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 56.1 bits (136), Expect = 2e-09
 Identities = 37/142 (26%), Positives = 56/142 (39%), Gaps = 14/142 (9%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           T ++TG   G+G  T  ELAR GA V    R+  + +A          +V     DL   
Sbjct: 18  TVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAG---QVEVRELDLQDL 74

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
               +  + V+       ++LINNA I  V   +  T +   +   TN    F L+ L  
Sbjct: 75  SSVRRFADGVS-----GADVLINNAGIMAVPYAL--TVDGFESQIGTNHLGHFALTNLLL 127

Query: 122 PLFKASGNGSIVFISSVGGVRG 143
           P         +V +SS+    G
Sbjct: 128 PRLTD----RVVTVSSMAHWPG 145

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score = 56.8 bits (137), Expect = 2e-09
 Identities = 41/164 (25%), Positives = 65/164 (39%), Gaps = 10/164 (6%)

Query: 2    TALVTGGTRGIGHATVEELARFGA--IVHTCSRNQI---ELDARLHEWKNKGFKVTGSVC 56
            + ++TGG  G G    + L   GA  +V T SR+ I       ++ EW+ +G +V  S  
Sbjct: 1886 SYVITGGLGGFGLQLAQWLRLRGAQKLVLT-SRSGIRTGYQARQVREWRRQGVQVLVSTS 1944

Query: 57   DLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHL 116
            + SS +    LI   T    G +  + N A +       + T E    VS   +    +L
Sbjct: 1945 NASSLDGARSLITEATQ--LGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANL 2002

Query: 117  SQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160
             ++             V  SSV   RG    + YG    AM ++
Sbjct: 2003 DRVTREA--CPELDYFVIFSSVSCGRGNAGQANYGFANSAMERI 2044

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} Length = 422

 Score = 48.2 bits (114), Expect = 1e-06
 Identities = 39/293 (13%), Positives = 73/293 (24%), Gaps = 55/293 (18%)

Query: 2   TALVTGGTRGIGHATVEELA-RFGAIVHTCSRNQIELDARL------------HEWKNKG 48
             LV G + G G A+    A  FGA        +    ++                K  G
Sbjct: 63  KVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAG 122

Query: 49  FKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAI-------------------- 88
                   D  S   R ++IE + +   G++++++ + A                     
Sbjct: 123 LYSKSINGDAFSDAARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIG 182

Query: 89  -AFVKPTVDITAEDM--------------STVSSTNFESVFHLSQLAHPLFKASGNGSIV 133
             +    +D   + +               T++    +               +     V
Sbjct: 183 QTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGGQDWELWIDALEGAGVLADGARSV 242

Query: 134 FISSVGGVRGIP--SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191
             S +G     P       G  K  +++  + L    AK     N      + T      
Sbjct: 243 AFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQASAAI 302

Query: 192 EEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVDGG 244
              P     +        +   G  +     +  L         GQ   VD  
Sbjct: 303 PVMPLYISMV-----YKIMKEKGLHEGTIEQLDRLFRERLYRQDGQPAEVDEQ 350

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* Length = 496

 Score = 46.6 bits (111), Expect = 4e-06
 Identities = 47/164 (28%), Positives = 64/164 (39%), Gaps = 27/164 (16%)

Query: 2   TALVTGGTRGIGHATVEELARFGA--IVHTCSR------NQIELDARLHEWKNKGFKVTG 53
           + LVTGGT GIG      LA  GA  +V T SR         EL A L +    G +VT 
Sbjct: 241 SVLVTGGTGGIGGRVARRLAEQGAAHLVLT-SRRGADAPGAAELRAELEQ---LGVRVTI 296

Query: 54  SVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAF-VKPTVDITAEDMSTVSSTNFES 112
           + CD + RE    L+  +       L  + ++A +A    P  D+T   +  +      +
Sbjct: 297 AACDAADREALAALLAELPE--DAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTA 354

Query: 113 VFHLSQLA--HPL--FKASGNGSIVFISSVGGVRGIPSVSLYGA 152
             HL +L     L  F        V  SS   V G      Y A
Sbjct: 355 ARHLHELTADLDLDAF--------VLFSSGAAVWGSGGQPGYAA 390

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} Length = 525

 Score = 46.3 bits (110), Expect = 4e-06
 Identities = 34/167 (20%), Positives = 56/167 (33%), Gaps = 18/167 (10%)

Query: 2   TALVTGGTRGIGHATVEELARFGA--IVHTCSR-------------NQIELDARLHEWKN 46
           T LVTG            LAR GA  ++   +                  L   + E  +
Sbjct: 253 TVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELAD 312

Query: 47  KGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVS 106
            G   T   CDL+  E   +L+  V+      L+ +++       +P     A+ ++ V 
Sbjct: 313 LGATATVVTCDLTDAEAAARLLAGVSD--AHPLSAVLHLPPTVDSEPLAATDADALARVV 370

Query: 107 STNFESVFHLSQL-AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGA 152
           +    +  HL +L             +V  SSV  + G      Y A
Sbjct: 371 TAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWGGAGQGAYAA 417

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 45.9 bits (109), Expect = 7e-06
 Identities = 38/168 (22%), Positives = 58/168 (34%), Gaps = 37/168 (22%)

Query: 2   TALVTGGTRGIGHATVEELA-RFGA--IVHTCSRNQI---ELDARLHEWKNKGFKVTGSV 55
           T LVTGGT  +G      L    G   +V   SR           + +    G +V+   
Sbjct: 532 TVLVTGGTGALGAEVARHLVIERGVRNLVLV-SRRGPAASGAAELVAQLTAYGAEVSLQA 590

Query: 56  CDLSSREQREKLIET------VTSIFQGKLNILINNAAIAFV---KPTVDITAEDMSTVS 106
           CD++ RE   K++ +      +T++              A V     +  +T E +  V 
Sbjct: 591 CDVADRETLAKVLASIPDEHPLTAVVHA-----------AGVLDDGVSESLTVERLDQVL 639

Query: 107 STNFESVFHLSQLAHPL--FKASGNGSIVFISSVGGVRGIPSVSLYGA 152
               +   +L +L  P            V  SSV GV G      Y A
Sbjct: 640 RPKVDGARNLLELIDPDVAL--------VLFSSVSGVLGSGGQGNYAA 679

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* Length = 486

 Score = 45.5 bits (108), Expect = 9e-06
 Identities = 43/163 (26%), Positives = 61/163 (37%), Gaps = 26/163 (15%)

Query: 2   TALVTGGTRGIGHATVEELARFGA--IVHTCSR------NQIELDARLHEWKNKGFKVTG 53
           T LVTGGT G+G      LAR GA  ++   SR         EL A L      G + T 
Sbjct: 228 TVLVTGGTGGVGGQIARWLARRGAPHLLLV-SRSGPDADGAGELVAELEA---LGARTTV 283

Query: 54  SVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESV 113
           + CD++ RE   +L+  +       L+ + + AA         +T E +   S       
Sbjct: 284 AACDVTDRESVRELLGGIGD--DVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGA 341

Query: 114 FHLSQLA--HPL--FKASGNGSIVFISSVGGVRGIPSVSLYGA 152
            +L +L     L  F        V  SS     G P +  Y  
Sbjct: 342 RNLHELTRELDLTAF--------VLFSSFASAFGAPGLGGYAP 376

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} Length = 511

 Score = 40.6 bits (95), Expect = 4e-04
 Identities = 43/164 (26%), Positives = 55/164 (33%), Gaps = 31/164 (18%)

Query: 2   TALVTGGTRGIGHATVEELARFGA--IVHTCSR------NQIELDARLHEWKNKGFKVTG 53
           T L+TGG   IG      LA  GA  +V T SR         EL   L      G +V  
Sbjct: 261 TVLITGGMGAIGRRLARRLAAEGAERLVLT-SRRGPEAPGAAELAEELRG---HGCEVVH 316

Query: 54  SVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESV 113
           + CD++ R+    L+           N + + A I        ++ E   TV        
Sbjct: 317 AACDVAERDALAALVTAYP------PNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGA 370

Query: 114 FHLSQL---AHPL--FKASGNGSIVFISSVGGVRGIPSVSLYGA 152
             L QL      L  F        V  SSV G  G      Y A
Sbjct: 371 ELLHQLTADIKGLDAF--------VLFSSVTGTWGNAGQGAYAA 406

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	259
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	100.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	100.0
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	100.0
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	100.0
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	100.0
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	100.0
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	100.0
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	100.0
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	100.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	100.0
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	100.0
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	100.0
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	100.0
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	100.0
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	100.0
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	100.0
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	100.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	100.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	100.0
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	100.0
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	100.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	100.0
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	100.0
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	100.0
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	100.0
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	100.0
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	100.0
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	100.0
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	100.0
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.97
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.97
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.97
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.96
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.96
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.96
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.96
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.96
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.96
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.95
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.95
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.95
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.95
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.95
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.95
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.94
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.94
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.94
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.94
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.94
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.94
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.94
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.94
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.94
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.94
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.94
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.94
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.94
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.94
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.94
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.93
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.93
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.93
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.93
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.93
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.93
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.93
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.93
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.93
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.93
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.93
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.93
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.93
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.93
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.93
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.93
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.93
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.92
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.92
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.92
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.92
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.92
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.92
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.92
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.91
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.91
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.91
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.91
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.91
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.91
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.9
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.9
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.9
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.9
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.9
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.9
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.9
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.89
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.89
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.89
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.89
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.89
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.89
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.89
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.89
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.88
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.88
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.87
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.87
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.87
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.86
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.86
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.84
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.83
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.83
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.83
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.81
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.81
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.8
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.8
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.79
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.76
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.75
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.74
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.73
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.66
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.44
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.37
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.99
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.98
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.9
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.88
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.79
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.63
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.62
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.61
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.57
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.52
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.49
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.46
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.46
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.44
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.41
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.4
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.39
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.39
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.37
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.37
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.33
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.33
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.3
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.3
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.29
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.28
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	98.27
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	98.24
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.2
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.19
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	98.16
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.14
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.1
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	98.09
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.07
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	98.06
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.03
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	98.02
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	98.02
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	98.01
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.0
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.97
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.96
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.94
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.94
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.9
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.89
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.89
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.88
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.84
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.83
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.79
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.78
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.77
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.75
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.73
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.71
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.69
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.68
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.67
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.64
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.64
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.64
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.63
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.6
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.59
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	97.58
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.54
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.45
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.45
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.39
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.36
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.34
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.33
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.32
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.31
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.31
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.3
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.27
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.26
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.21
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.18
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.17
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.16
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.11
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	97.1
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	97.09
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	97.07
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	97.06
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.05
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	97.04
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.04
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	97.03
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	97.02
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	97.02
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	96.99
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	96.97
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.95
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.95
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.94
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.94
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	96.92
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	96.92
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	96.91
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	96.9
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	96.89
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	96.87
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	96.85
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	96.84
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	96.83
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	96.82
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.81
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	96.79
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	96.78
3tl2_A	315	Malate dehydrogenase; center for structural genomi	96.77
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	96.77
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.76
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.75
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	96.72
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	96.72
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.71
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.7
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	96.7
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	96.69
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	96.69
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	96.68
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	96.68
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.66
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	96.65
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	96.65
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.62
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.62
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	96.6
3qha_A	296	Putative oxidoreductase; seattle structural genomi	96.59
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	96.58
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	96.56
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	96.56
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	96.55
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.55
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.53
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	96.52
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	96.51
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.49
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.48
1lnq_A	336	MTHK channels, potassium channel related protein;	96.48
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	96.46
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.42
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.41
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.4
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	96.38
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.38
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	96.36
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	96.36
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	96.35
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	96.32
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	96.29
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	96.27
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	96.25
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	96.23
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	96.23
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	96.22
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	96.2
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	96.2
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	96.19
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	96.17
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	96.15
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	96.11
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	96.05
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	95.99
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	95.98
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	95.93
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	95.91
3l07_A	285	Bifunctional protein fold; structural genomics, ID	95.91
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	95.87
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	95.87
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	95.85
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	95.79
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	95.79
3mog_A	483	Probable 3-hydroxybutyryl-COA dehydrogenase; struc	95.78
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	95.69
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	95.68
4g65_A	461	TRK system potassium uptake protein TRKA; structur	95.67
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	95.67

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=9.8e-61  Score=392.52  Aligned_cols=245  Identities=27%  Similarity=0.402  Sum_probs=227.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||+++|+.|+++|++|++++|+++++++..+++.+.+.++.++++|++|+++++++++++.+++ +++|
T Consensus         8 KvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~-G~iD   86 (254)
T 4fn4_A            8 KVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY-SRID   86 (254)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH-SCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence            899999999999999999999999999999999999999999998888899999999999999999999999999 7999


Q ss_pred             EEEEcCCCCC-CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      +||||||+.. ..++.+.+.++|++++++|+.++++++|+++|+|.+++.|+|||+||..+..+.++..+|++||+|+.+
T Consensus        87 iLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~~~Y~asKaal~~  166 (254)
T 4fn4_A           87 VLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIG  166 (254)
T ss_dssp             EEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSCHHHHHHHHHHHH
T ss_pred             EEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCChHHHHHHHHHHH
Confidence            9999999864 468899999999999999999999999999999999889999999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      |+|++|.|++++|||||+|+||+++||+........ ...........+|.+|+++|+|++++++||+|++++|+|||.|
T Consensus       167 ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~-~~~~~~~~~~~~~~~R~g~pediA~~v~fLaSd~a~~iTG~~i  245 (254)
T 4fn4_A          167 LTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPS-ELGMRTLTKLMSLSSRLAEPEDIANVIVFLASDEASFVNGDAV  245 (254)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCC-HHHHHHHHHHHTTCCCCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCc-HHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhcCCcCCEE
Confidence            999999999999999999999999999976554332 2223344455678899999999999999999999999999999


Q ss_pred             EeCCCcee
Q 024994          240 CVDGGVTV  247 (259)
Q Consensus       240 ~~dgG~~~  247 (259)
                      .+|||+++
T Consensus       246 ~VDGG~t~  253 (254)
T 4fn4_A          246 VVDGGLTV  253 (254)
T ss_dssp             EESTTGGG
T ss_pred             EeCCCccc
Confidence            99999876

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=1.5e-60  Score=391.57  Aligned_cols=242  Identities=36%  Similarity=0.478  Sum_probs=228.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||+++|+.|+++|++|++++|+++.+++..+++.+.+.++.++++|++|+++++++++++.+++ +++|
T Consensus        10 KvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-G~iD   88 (255)
T 4g81_D           10 KTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEG-IHVD   88 (255)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTT-CCCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHC-CCCc
Confidence            799999999999999999999999999999999999999999998888899999999999999999999999999 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHh-CCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKA-SGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      +||||||+....++.+.+.++|++++++|+.++++++|+++|+|.+ .+.|+||++||..+..+.+...+|++||+++.+
T Consensus        89 iLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~  168 (255)
T 4g81_D           89 ILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKM  168 (255)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTCHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCchhHHHHHHHHHH
Confidence            9999999998899999999999999999999999999999999965 467999999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      |+|++|.|++++|||||+|+||+++||+......+   +...+.+...+|++|+++|+|++++++||+|++++|+|||.|
T Consensus       169 ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~---~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S~~a~~iTG~~i  245 (255)
T 4g81_D          169 LTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIED---KQFDSWVKSSTPSQRWGRPEELIGTAIFLSSKASDYINGQII  245 (255)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTC---HHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCC---HHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhCCCcCCEE
Confidence            99999999999999999999999999998655433   336677888999999999999999999999999999999999


Q ss_pred             EeCCCce
Q 024994          240 CVDGGVT  246 (259)
Q Consensus       240 ~~dgG~~  246 (259)
                      .+|||+.
T Consensus       246 ~VDGG~~  252 (255)
T 4g81_D          246 YVDGGWL  252 (255)
T ss_dssp             EESTTGG
T ss_pred             EECCCeE
Confidence            9999975

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=2.6e-58  Score=381.64  Aligned_cols=241  Identities=29%  Similarity=0.440  Sum_probs=217.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||+++|+.|+++|++|++++|+.+++++..+++   +.++..+++|++|+++++++++++.+++ |++|
T Consensus        30 KvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~---g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-G~iD  105 (273)
T 4fgs_A           30 KIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---GGGAVGIQADSANLAELDRLYEKVKAEA-GRID  105 (273)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHHHH-SCEE
T ss_pred             CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCCeEEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence            79999999999999999999999999999999999998887776   5578899999999999999999999999 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||.....++.+.+.++|++++++|+.++++++|+++|+|++  .|+||+++|..+..+.|...+|++||+|+.+|
T Consensus       106 iLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~--~G~IInisS~~~~~~~~~~~~Y~asKaav~~l  183 (273)
T 4fgs_A          106 VLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR--GSSVVLTGSTAGSTGTPAFSVYAASKAALRSF  183 (273)
T ss_dssp             EEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEECCGGGGSCCTTCHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCeEEEEeehhhccCCCCchHHHHHHHHHHHH
Confidence            9999999988899999999999999999999999999999999965  48999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCC--chHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPE--GSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI  238 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~  238 (259)
                      +|++|.|++++|||||+|+||+++|++.........  .+...+.+...+|++|+++|+|++++++||+|++++|+||+.
T Consensus       184 tr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~FLaSd~a~~iTG~~  263 (273)
T 4fgs_A          184 ARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALFLASDDSSFVTGAE  263 (273)
T ss_dssp             HHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCccCCe
Confidence            999999999999999999999999999876543221  223556677889999999999999999999999999999999


Q ss_pred             EEeCCCcee
Q 024994          239 ICVDGGVTV  247 (259)
Q Consensus       239 l~~dgG~~~  247 (259)
                      |.+|||.+.
T Consensus       264 i~VDGG~s~  272 (273)
T 4fgs_A          264 LFVDGGSAQ  272 (273)
T ss_dssp             EEESTTTTT
T ss_pred             EeECcChhh
Confidence            999999864

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.8e-58  Score=376.00  Aligned_cols=236  Identities=30%  Similarity=0.405  Sum_probs=215.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||+++|+.|+++|++|++++|+..  ++..+++...+.++.++++|++|+++++++++     + +++|
T Consensus        10 KvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~-----~-g~iD   81 (247)
T 4hp8_A           10 RKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDGGNASALLIDFADPLAAKDSFT-----D-AGFD   81 (247)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHTTCCEEEEECCTTSTTTTTTSST-----T-TCCC
T ss_pred             CEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhCCcEEEEEccCCCHHHHHHHHH-----h-CCCC
Confidence            79999999999999999999999999999999864  34556666778899999999999998877664     3 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      +||||||+....++.+.+.++|++++++|+.++|+++|+++|+|.+++ .|+||++||..+..+.++..+|++||+++.+
T Consensus        82 iLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~Y~asKaav~~  161 (247)
T 4hp8_A           82 ILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVAG  161 (247)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChHHHHHHHHHHH
Confidence            999999999888999999999999999999999999999999997664 7999999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      |+|++|.|++++|||||+|+||+++||+......+   +...+.+...+|++|+++|+|++++++||+|++++|+||+.|
T Consensus       162 ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~---~~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~a~~iTG~~i  238 (247)
T 4hp8_A          162 LTKLLANEWAAKGINVNAIAPGYIETNNTEALRAD---AARNKAILERIPAGRWGHSEDIAGAAVFLSSAAADYVHGAIL  238 (247)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTS---HHHHHHHHTTCTTSSCBCTHHHHHHHHHHTSGGGTTCCSCEE
T ss_pred             HHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccC---HHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcCCcCCeE
Confidence            99999999999999999999999999998655433   235667788999999999999999999999999999999999


Q ss_pred             EeCCCcee
Q 024994          240 CVDGGVTV  247 (259)
Q Consensus       240 ~~dgG~~~  247 (259)
                      .+|||++.
T Consensus       239 ~VDGG~~A  246 (247)
T 4hp8_A          239 NVDGGWLA  246 (247)
T ss_dssp             EESTTGGG
T ss_pred             EECccccc
Confidence            99999763

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=1.4e-56  Score=366.48  Aligned_cols=235  Identities=24%  Similarity=0.369  Sum_probs=213.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+||||||++|||+++|++|+++|++|++++|+++.+++..    +...++.++++|++|+++++++++++.+++ +++|
T Consensus         3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~----~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~-g~iD   77 (247)
T 3ged_A            3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFA----KERPNLFYFHGDVADPLTLKKFVEYAMEKL-QRID   77 (247)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH----TTCTTEEEEECCTTSHHHHHHHHHHHHHHH-SCCC
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HhcCCEEEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence            89999999999999999999999999999999988776544    335678999999999999999999999999 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||.....++.+.+.++|++++++|+.++++++|+++|+|.++ +|+||++||..+..+.|...+|++||+++.+|
T Consensus        78 iLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~-~G~IInisS~~~~~~~~~~~~Y~asKaal~~l  156 (247)
T 3ged_A           78 VLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN-KGRIINIASTRAFQSEPDSEAYASAKGGIVAL  156 (247)
T ss_dssp             EEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCcEEEEeecccccCCCCCHHHHHHHHHHHHH
Confidence            99999999988899999999999999999999999999999999876 59999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC  240 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~  240 (259)
                      +|++|.|+++ |||||+|+||+++|++.+..         .+.....+|++|+++|+|++++++||+++  +|+|||.|.
T Consensus       157 tk~lA~ela~-~IrVN~I~PG~i~t~~~~~~---------~~~~~~~~Pl~R~g~pediA~~v~fL~s~--~~iTG~~i~  224 (247)
T 3ged_A          157 THALAMSLGP-DVLVNCIAPGWINVTEQQEF---------TQEDCAAIPAGKVGTPKDISNMVLFLCQQ--DFITGETII  224 (247)
T ss_dssp             HHHHHHHHTT-TSEEEEEEECSBCCCC---C---------CHHHHHTSTTSSCBCHHHHHHHHHHHHHC--SSCCSCEEE
T ss_pred             HHHHHHHHCC-CCEEEEEecCcCCCCCcHHH---------HHHHHhcCCCCCCcCHHHHHHHHHHHHhC--CCCCCCeEE
Confidence            9999999998 99999999999999976432         23455678999999999999999999984  699999999


Q ss_pred             eCCCceeeecccc
Q 024994          241 VDGGVTVTVNVNG  253 (259)
Q Consensus       241 ~dgG~~~~~~~~~  253 (259)
                      +|||.+....+.+
T Consensus       225 VDGG~s~r~~~~~  237 (247)
T 3ged_A          225 VDGGMSKRMIYHG  237 (247)
T ss_dssp             ESTTGGGCCCCTT
T ss_pred             ECcCHHHhCcccC
Confidence            9999988765543

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=2.8e-57  Score=368.30  Aligned_cols=230  Identities=35%  Similarity=0.529  Sum_probs=205.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||+++|+.|+++|++|++++|+.+.+++      ..+.++..+++|++|+++++++++    ++ +++|
T Consensus        12 K~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~------~~~~~~~~~~~Dv~~~~~v~~~~~----~~-g~iD   80 (242)
T 4b79_A           12 QQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA------PRHPRIRREELDITDSQRLQRLFE----AL-PRLD   80 (242)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS------CCCTTEEEEECCTTCHHHHHHHHH----HC-SCCS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh------hhcCCeEEEEecCCCHHHHHHHHH----hc-CCCC
Confidence            899999999999999999999999999999999877643      224589999999999999888775    45 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||+.  .+..+.+.++|++++++|+.++++++|+++|+|+++ +|+|||+||..+..+.++..+|++||+++.+|
T Consensus        81 iLVNNAGi~--~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS~~~~~~~~~~~~Y~asKaav~~l  157 (242)
T 4b79_A           81 VLVNNAGIS--RDREEYDLATFERVLRLNLSAAMLASQLARPLLAQR-GGSILNIASMYSTFGSADRPAYSASKGAIVQL  157 (242)
T ss_dssp             EEEECCCCC--CGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-CEEEEEECCGGGTSCCSSCHHHHHHHHHHHHH
T ss_pred             EEEECCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEeeccccCCCCCCHHHHHHHHHHHHH
Confidence            999999985  467788999999999999999999999999999765 59999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC  240 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~  240 (259)
                      +|+++.|++++|||||+|+||+++||+......+   +...+.+.+.+|++|+++|+|++++++||+|++++|+||+.|.
T Consensus       158 tr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~---~~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~a~~iTG~~l~  234 (242)
T 4b79_A          158 TRSLACEYAAERIRVNAIAPGWIDTPLGAGLKAD---VEATRRIMQRTPLARWGEAPEVASAAAFLCGPGASFVTGAVLA  234 (242)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBCCC-----CCC---HHHHHHHHHTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEE
T ss_pred             HHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCC---HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCccCceEE
Confidence            9999999999999999999999999998765443   3367778889999999999999999999999999999999999


Q ss_pred             eCCCcee
Q 024994          241 VDGGVTV  247 (259)
Q Consensus       241 ~dgG~~~  247 (259)
                      +|||+..
T Consensus       235 VDGG~la  241 (242)
T 4b79_A          235 VDGGYLC  241 (242)
T ss_dssp             ESTTGGG
T ss_pred             ECccHhh
Confidence            9999753

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=9.9e-57  Score=370.31  Aligned_cols=243  Identities=30%  Similarity=0.376  Sum_probs=214.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||+++|+.|+++|++|++++|+.+..+ ..+++.+.+.++.++++|++|+++++++++++.++| +++|
T Consensus         8 KvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~-G~iD   85 (258)
T 4gkb_A            8 KVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGA-FLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATF-GRLD   85 (258)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-HHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-HHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHh-CCCC
Confidence            89999999999999999999999999999999987754 345566667789999999999999999999999999 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||+....+ .+.+.++|++++++|+.+++.++|+++|+|+++ +|+||++||..+..+.++..+|++||+|+.+|
T Consensus        86 iLVNnAGi~~~~~-~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS~~~~~~~~~~~~Y~asKaav~~l  163 (258)
T 4gkb_A           86 GLVNNAGVNDGIG-LDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT-RGAIVNISSKTAVTGQGNTSGYCASKGAQLAL  163 (258)
T ss_dssp             EEEECCCCCCCCC-TTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCTHHHHCCSSCHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCC-ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEEEeehhhccCCCCchHHHHHHHHHHHH
Confidence            9999999865444 478999999999999999999999999999765 59999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCC-CCchHHHHhhhhcCCCC-CCCCHHHHHHHHHHHhCCCCCCccccE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEG-PEGSEFLDGIARQTPIG-RAGEPDEVSSLVAFLCLPAASYITGQI  238 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~va~~~~~l~~~~~~~~~G~~  238 (259)
                      +|++|.|++++|||||+|+||+++|++.+..... ...+...+.+....|++ |+++|+|++++++||+|++++|+|||.
T Consensus       164 tr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~peeiA~~v~fLaS~~a~~iTG~~  243 (258)
T 4gkb_A          164 TREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDEIADTAVFLLSPRASHTTGEW  243 (258)
T ss_dssp             HHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhcCccCCe
Confidence            9999999999999999999999999998765332 22233567777888885 899999999999999999999999999


Q ss_pred             EEeCCCcee
Q 024994          239 ICVDGGVTV  247 (259)
Q Consensus       239 l~~dgG~~~  247 (259)
                      |.+|||++.
T Consensus       244 i~VDGG~T~  252 (258)
T 4gkb_A          244 LFVDGGYTH  252 (258)
T ss_dssp             EEESTTTTT
T ss_pred             EEECCCcch
Confidence            999999863

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=1.8e-54  Score=358.15  Aligned_cols=241  Identities=22%  Similarity=0.224  Sum_probs=220.2

Q ss_pred             CEEEEEcCcc--hHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024994            1 MTALVTGGTR--GIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG-FKVTGSVCDLSSREQREKLIETVTSIFQG   77 (259)
Q Consensus         1 k~~lItG~s~--giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (259)
                      |++|||||+|  |||+++|++|+++|++|++++|+++.++++.+++.+.+ .++.++++|++|+++++++++++.+++ +
T Consensus         7 K~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-G   85 (256)
T 4fs3_A            7 KTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDV-G   85 (256)
T ss_dssp             CEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHH-C
T ss_pred             CEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHh-C
Confidence            8999999875  99999999999999999999999999988888887654 478999999999999999999999999 7


Q ss_pred             CccEEEEcCCCCCC----CCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhh
Q 024994           78 KLNILINNAAIAFV----KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAY  153 (259)
Q Consensus        78 ~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  153 (259)
                      ++|+||||||+...    .++.+.+.++|+..+++|+.+++.+++.+.|++.+  +|+||++||..+..+.+++..|++|
T Consensus        86 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~--~G~IVnisS~~~~~~~~~~~~Y~as  163 (256)
T 4fs3_A           86 NIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPE--GGSIVATTYLGGEFAVQNYNVMGVA  163 (256)
T ss_dssp             CCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTT--CEEEEEEECGGGTSCCTTTHHHHHH
T ss_pred             CCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCEEEEEeccccccCcccchhhHHH
Confidence            99999999998643    35567889999999999999999999999887754  5999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 024994          154 KGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASY  233 (259)
Q Consensus       154 K~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  233 (259)
                      |+|+.+|+|+++.|++++|||||+|+||+++|++.+....   .+...+.+...+|++|+++|+||+++++||+|++++|
T Consensus       164 Kaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~---~~~~~~~~~~~~Pl~R~g~peevA~~v~fL~Sd~a~~  240 (256)
T 4fs3_A          164 KASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGG---FNTILKEIKERAPLKRNVDQVEVGKTAAYLLSDLSSG  240 (256)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTT---HHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccC---CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence            9999999999999999999999999999999999876533   2346778888999999999999999999999999999


Q ss_pred             ccccEEEeCCCcee
Q 024994          234 ITGQIICVDGGVTV  247 (259)
Q Consensus       234 ~~G~~l~~dgG~~~  247 (259)
                      +||+.|.+|||++.
T Consensus       241 iTG~~i~VDGG~~a  254 (256)
T 4fs3_A          241 VTGENIHVDSGFHA  254 (256)
T ss_dssp             CCSCEEEESTTGGG
T ss_pred             ccCCEEEECcCHHh
Confidence            99999999999864

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=1.1e-54  Score=359.02  Aligned_cols=236  Identities=28%  Similarity=0.364  Sum_probs=208.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||+++|+.|+++|++|++++|+.+..          .....++++|++|+++++++++++.+++ +++|
T Consensus        12 K~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-G~iD   80 (261)
T 4h15_A           12 KRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG----------LPEELFVEADLTTKEGCAIVAEATRQRL-GGVD   80 (261)
T ss_dssp             CEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT----------SCTTTEEECCTTSHHHHHHHHHHHHHHT-SSCS
T ss_pred             CEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC----------CCcEEEEEcCCCCHHHHHHHHHHHHHHc-CCCC
Confidence            7999999999999999999999999999999976421          1233478899999999999999999999 7999


Q ss_pred             EEEEcCCCCC--CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCC-CChhhhhhHHHH
Q 024994           81 ILINNAAIAF--VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIP-SVSLYGAYKGAM  157 (259)
Q Consensus        81 ~vi~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~-~~~~Y~~sK~a~  157 (259)
                      +||||||+..  .+++.+.+.++|++++++|+.++++++|+++|+|.+++.|+||++||..+..+.| +..+|++||+|+
T Consensus        81 ilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~~~~Y~asKaal  160 (261)
T 4h15_A           81 VIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPESTTAYAAAKAAL  160 (261)
T ss_dssp             EEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTTCHHHHHHHHHH
T ss_pred             EEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCccHHHHHHHHHH
Confidence            9999999754  3578899999999999999999999999999999998899999999999999876 578999999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcC------CC---CchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhC
Q 024994          158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE------GP---EGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCL  228 (259)
Q Consensus       158 ~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~------~~---~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  228 (259)
                      .+|+|+++.|++++|||||+|+||+++|++......      ..   ............+|++|+++|+||+++++||+|
T Consensus       161 ~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peevA~~v~fLaS  240 (261)
T 4h15_A          161 STYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPAKPEEVANLIAFLAS  240 (261)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTSSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhC
Confidence            999999999999999999999999999998643211      11   112344555677899999999999999999999


Q ss_pred             CCCCCccccEEEeCCCcee
Q 024994          229 PAASYITGQIICVDGGVTV  247 (259)
Q Consensus       229 ~~~~~~~G~~l~~dgG~~~  247 (259)
                      ++++|+||+.|.+|||...
T Consensus       241 ~~a~~itG~~i~VDGG~v~  259 (261)
T 4h15_A          241 DRAASITGAEYTIDGGTVP  259 (261)
T ss_dssp             GGGTTCCSCEEEESTTCSC
T ss_pred             chhcCccCcEEEECCcCcc
Confidence            9999999999999999754

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=2.6e-52  Score=345.74  Aligned_cols=246  Identities=29%  Similarity=0.435  Sum_probs=228.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEe-eCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTC-SRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||++|||++++++|+++|++|+++ +|+.+.+++..+++...+.++.++++|++|.++++++++++.+.+ +++
T Consensus         5 k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~i   83 (258)
T 3oid_A            5 KCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETF-GRL   83 (258)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH-SCC
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-CCC
Confidence            789999999999999999999999999997 899999988888888777889999999999999999999999999 799


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      |+||||||.....++.+.+.++|++++++|+.+++.++++++|+|.+++.++||++||..+..+.++...|++||+++++
T Consensus        84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~  163 (258)
T 3oid_A           84 DVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEA  163 (258)
T ss_dssp             CEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTTCHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCCcHHHHHHHHHHHH
Confidence            99999999888888899999999999999999999999999999998888999999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      |+++++.|++++||+||+|+||+++|++......   .+...+.+....|.+|+.+|+|++++++||+++.++++||+.|
T Consensus       164 l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~~~~itG~~i  240 (258)
T 3oid_A          164 LTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPN---REDLLEDARQNTPAGRMVEIKDMVDTVEFLVSSKADMIRGQTI  240 (258)
T ss_dssp             HHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTT---HHHHHHHHHHHCTTSSCBCHHHHHHHHHHHTSSTTTTCCSCEE
T ss_pred             HHHHHHHHHhhcCcEEEEEeeCCCcChhhhhccc---CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccCCccCCEE
Confidence            9999999999999999999999999999865432   2335667778899999999999999999999999999999999


Q ss_pred             EeCCCceeeec
Q 024994          240 CVDGGVTVTVN  250 (259)
Q Consensus       240 ~~dgG~~~~~~  250 (259)
                      .+|||.++...
T Consensus       241 ~vdGG~~~~~~  251 (258)
T 3oid_A          241 IVDGGRSLLVL  251 (258)
T ss_dssp             EESTTGGGBCC
T ss_pred             EECCCccCCCC
Confidence            99999887554

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=4.3e-52  Score=344.12  Aligned_cols=243  Identities=34%  Similarity=0.532  Sum_probs=225.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++++|++|.++++++++++.+.+ +++|
T Consensus        13 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~id   91 (256)
T 3gaf_A           13 AVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQF-GKIT   91 (256)
T ss_dssp             CEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-CCCC
Confidence            789999999999999999999999999999999999999888888878899999999999999999999999999 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||.....++ +.+.++|++++++|+.+++.++++++|+|.+++.++||++||..+..+.++...|++||+++++|
T Consensus        92 ~lv~nAg~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~  170 (256)
T 3gaf_A           92 VLVNNAGGGGPKPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHL  170 (256)
T ss_dssp             EEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCCchHHHHHHHHHHHH
Confidence            99999999877777 88999999999999999999999999999988889999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC  240 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~  240 (259)
                      +++++.|++++|||||+|+||+++|++.....    .+...+.+....|.+|+.+|+|++++++||+++.+.++||+.|+
T Consensus       171 ~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~----~~~~~~~~~~~~p~~r~~~~~dva~~~~~L~s~~~~~itG~~i~  246 (256)
T 3gaf_A          171 TRNIAFDVGPMGIRVNAIAPGAIKTDALATVL----TPEIERAMLKHTPLGRLGEAQDIANAALFLCSPAAAWISGQVLT  246 (256)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECCBCCHHHHHHC----CHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHHhhhCcEEEEEEEccccCchhhhcc----CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCcccCccCCEEE
Confidence            99999999999999999999999999875432    22355667778899999999999999999999999999999999


Q ss_pred             eCCCceeee
Q 024994          241 VDGGVTVTV  249 (259)
Q Consensus       241 ~dgG~~~~~  249 (259)
                      +|||...++
T Consensus       247 vdgG~~~~~  255 (256)
T 3gaf_A          247 VSGGGVQEL  255 (256)
T ss_dssp             ESTTSCCC-
T ss_pred             ECCCccccC
Confidence            999987654

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=8.4e-52  Score=343.47  Aligned_cols=247  Identities=33%  Similarity=0.501  Sum_probs=228.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG-FKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++...+ .++.++++|++|.++++++++++.+++ +++
T Consensus        11 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~i   89 (262)
T 3pk0_A           11 RSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEF-GGI   89 (262)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHH-SCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHh-CCC
Confidence            789999999999999999999999999999999999999888887665 689999999999999999999999999 799


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCcc-CCCCCChhhhhhHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV-RGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~-~~~~~~~~Y~~sK~a~~  158 (259)
                      |+||||||+....++.+.+.++|++++++|+.+++.++++++|+|.+++.++||++||..+. .+.++...|++||++++
T Consensus        90 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK~a~~  169 (262)
T 3pk0_A           90 DVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQL  169 (262)
T ss_dssp             SEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCTTCHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCCChhhHHHHHHHH
Confidence            99999999988888999999999999999999999999999999998888999999999886 78899999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI  238 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~  238 (259)
                      +|+++++.|++++||+||+|+||+++|++....     .+...+.+....|.+|+.+|+|++++++||+++.+.++||+.
T Consensus       170 ~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~-----~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~itG~~  244 (262)
T 3pk0_A          170 GFMRTAAIELAPHKITVNAIMPGNIMTEGLLEN-----GEEYIASMARSIPAGALGTPEDIGHLAAFLATKEAGYITGQA  244 (262)
T ss_dssp             HHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTT-----CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHhhCcEEEEEEeCcCcCcccccc-----CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCCE
Confidence            999999999999999999999999999976532     233567777889999999999999999999999999999999


Q ss_pred             EEeCCCceeeecccc
Q 024994          239 ICVDGGVTVTVNVNG  253 (259)
Q Consensus       239 l~~dgG~~~~~~~~~  253 (259)
                      |.+|||..+..++..
T Consensus       245 i~vdGG~~~~~~~~~  259 (262)
T 3pk0_A          245 IAVDGGQVLPESLDA  259 (262)
T ss_dssp             EEESTTTTCCSSGGG
T ss_pred             EEECCCeecCcchhh
Confidence            999999998766554

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=9.3e-52  Score=343.76  Aligned_cols=246  Identities=29%  Similarity=0.420  Sum_probs=221.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHh-c-CCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKN-K-GFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++.. . +.++.++++|++|.++++++++++.+.+ ++
T Consensus         9 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~   87 (265)
T 3lf2_A            9 AVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTL-GC   87 (265)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHH-CS
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHc-CC
Confidence            7899999999999999999999999999999999999888888875 3 3359999999999999999999999999 79


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      +|+||||||+....++.+.+.++|++++++|+.+++.++++++|+|.+++.++||++||..+..+.++...|++||++++
T Consensus        88 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~  167 (265)
T 3lf2_A           88 ASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGVK  167 (265)
T ss_dssp             CSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTTBHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCCchhhHHHHHHHH
Confidence            99999999998888899999999999999999999999999999999888899999999999999999999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCC-----CchHHHHhhhhc--CCCCCCCCHHHHHHHHHHHhCCCC
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGP-----EGSEFLDGIARQ--TPIGRAGEPDEVSSLVAFLCLPAA  231 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~-----~~~~~~~~~~~~--~~~~~~~~~~~va~~~~~l~~~~~  231 (259)
                      +|+++++.|++++|||||+|+||+++|++........     ..+.........  .|.+|+++|+|++++++||+++.+
T Consensus       168 ~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~~  247 (265)
T 3lf2_A          168 NLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAILFLASPLS  247 (265)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCcCCCcCHHHHHHHHHHHhCchh
Confidence            9999999999999999999999999999865432211     112222222222  899999999999999999999999


Q ss_pred             CCccccEEEeCCCcee
Q 024994          232 SYITGQIICVDGGVTV  247 (259)
Q Consensus       232 ~~~~G~~l~~dgG~~~  247 (259)
                      +++||+.|.+|||.++
T Consensus       248 ~~itG~~i~vdGG~~~  263 (265)
T 3lf2_A          248 AYTTGSHIDVSGGLSR  263 (265)
T ss_dssp             TTCCSEEEEESSSCCC
T ss_pred             cCcCCCEEEECCCCcC
Confidence            9999999999999875

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=1.9e-52  Score=348.87  Aligned_cols=244  Identities=32%  Similarity=0.479  Sum_probs=227.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...+.++.++++|++|.++++++++++.+.+ +++|
T Consensus        27 k~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD  105 (271)
T 4ibo_A           27 RTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQG-IDVD  105 (271)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHT-CCCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHC-CCCC
Confidence            789999999999999999999999999999999999999999988878889999999999999999999999999 7899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||+....++.+.+.++|++++++|+.+++.++++++|.|.+++.++||++||..+..+.++...|++||+++++|
T Consensus       106 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asKaa~~~l  185 (271)
T 4ibo_A          106 ILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTVAKGGIKML  185 (271)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCCchhHHHHHHHHHHH
Confidence            99999999888888999999999999999999999999999999988789999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC  240 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~  240 (259)
                      +++++.|++++||+||+|+||+++|++.......   +...+.+....|.+|+++|+|++++++||+++.+.++||+.|.
T Consensus       186 ~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~---~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~~~~itG~~i~  262 (271)
T 4ibo_A          186 TRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDN---PEFDAWVKARTPAKRWGKPQELVGTAVFLSASASDYVNGQIIY  262 (271)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHC---HHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHHhhhCeEEEEEEeccEeCcchhhcccC---HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCcEEE
Confidence            9999999999999999999999999987544221   2356667788999999999999999999999999999999999


Q ss_pred             eCCCceee
Q 024994          241 VDGGVTVT  248 (259)
Q Consensus       241 ~dgG~~~~  248 (259)
                      +|||..++
T Consensus       263 vdGG~~~~  270 (271)
T 4ibo_A          263 VDGGMLSV  270 (271)
T ss_dssp             ESTTGGGB
T ss_pred             ECCCeecc
Confidence            99998765

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=2.2e-51  Score=338.35  Aligned_cols=238  Identities=34%  Similarity=0.473  Sum_probs=220.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+.+++..+++..   +..++++|++|.++++++++++.+++ +++|
T Consensus        10 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD   85 (248)
T 3op4_A           10 KVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD---NGKGMALNVTNPESIEAVLKAITDEF-GGVD   85 (248)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG---GEEEEECCTTCHHHHHHHHHHHHHHH-CCCS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc---cceEEEEeCCCHHHHHHHHHHHHHHc-CCCC
Confidence            7899999999999999999999999999999999998887777643   57889999999999999999999999 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||+....++.+.+.++|++++++|+.+++.++++++|+|.+++.++||++||..+..+.++...|++||+++++|
T Consensus        86 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l  165 (248)
T 3op4_A           86 ILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGF  165 (248)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHHHHHHH
Confidence            99999999888888899999999999999999999999999999888889999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC  240 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~  240 (259)
                      +++++.|++++|||||+|+||+++|++.+...     ...........|.+++.+|+|++++++||+++.+.++||++|.
T Consensus       166 ~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-----~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~itG~~i~  240 (248)
T 3op4_A          166 TKSMAREVASRGVTVNTVAPGFIETDMTKALN-----DEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETLH  240 (248)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBSSTTTTTSC-----HHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHHHHhCeEEEEEeeCCCCCchhhhcC-----HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCccCCccCcEEE
Confidence            99999999999999999999999999876542     2345566778899999999999999999999999999999999


Q ss_pred             eCCCcee
Q 024994          241 VDGGVTV  247 (259)
Q Consensus       241 ~dgG~~~  247 (259)
                      +|||..+
T Consensus       241 vdgG~~~  247 (248)
T 3op4_A          241 VNGGMYM  247 (248)
T ss_dssp             ESTTSSC
T ss_pred             ECCCeec
Confidence            9999764

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=3.8e-52  Score=346.27  Aligned_cols=244  Identities=31%  Similarity=0.403  Sum_probs=225.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKN-KGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++.. .+.++.++++|++|.++++++++++.+.+ +++
T Consensus        21 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~i   99 (266)
T 4egf_A           21 KRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAF-GGL   99 (266)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHH-TSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc-CCC
Confidence            7899999999999999999999999999999999999888888765 46789999999999999999999999999 799


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      |+||||||+....++.+.+.++|++++++|+.+++.++++++|+|.+++ .++||++||..+..+.++...|++||++++
T Consensus       100 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~  179 (266)
T 4egf_A          100 DVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLV  179 (266)
T ss_dssp             SEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCChHHHHHHHHHH
Confidence            9999999998888889999999999999999999999999999998765 689999999999999999999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI  238 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~  238 (259)
                      +|+++++.|++++|||||+|+||+++|++......   .......+....|.+|+.+|+|++++++||+++.+.++||+.
T Consensus       180 ~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~itG~~  256 (266)
T 4egf_A          180 MATKVLARELGPHGIRANSVCPTVVLTEMGQRVWG---DEAKSAPMIARIPLGRFAVPHEVSDAVVWLASDAASMINGVD  256 (266)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTC---SHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhcc---ChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCccCcE
Confidence            99999999999999999999999999998754432   123556677788999999999999999999999999999999


Q ss_pred             EEeCCCceee
Q 024994          239 ICVDGGVTVT  248 (259)
Q Consensus       239 l~~dgG~~~~  248 (259)
                      |++|||++++
T Consensus       257 i~vdGG~~~~  266 (266)
T 4egf_A          257 IPVDGGYTMG  266 (266)
T ss_dssp             EEESTTGGGC
T ss_pred             EEECCCccCC
Confidence            9999998763

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.2e-51  Score=344.49  Aligned_cols=246  Identities=30%  Similarity=0.435  Sum_probs=220.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...+.++.++++|++|.++++++++++.+.+ +++|
T Consensus        29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD  107 (283)
T 3v8b_A           29 PVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKF-GHLD  107 (283)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh-CCCC
Confidence            689999999999999999999999999999999999999988888777889999999999999999999999999 7999


Q ss_pred             EEEEcCCCCCC-CCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccC--CCCCChhhhhhHHHH
Q 024994           81 ILINNAAIAFV-KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR--GIPSVSLYGAYKGAM  157 (259)
Q Consensus        81 ~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~--~~~~~~~Y~~sK~a~  157 (259)
                      +||||||+... .++.+.+.++|++++++|+.+++.++++++|+|++++.++||++||..+..  +.++...|++||+++
T Consensus       108 ~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~~~Y~asKaa~  187 (283)
T 3v8b_A          108 IVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQ  187 (283)
T ss_dssp             EEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCSTTCHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCCCCchHHHHHHHHH
Confidence            99999998644 788899999999999999999999999999999988889999999999877  778899999999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchH--HHHhhhhcCCC--CCCCCHHHHHHHHHHHhCCCCCC
Q 024994          158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSE--FLDGIARQTPI--GRAGEPDEVSSLVAFLCLPAASY  233 (259)
Q Consensus       158 ~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~va~~~~~l~~~~~~~  233 (259)
                      ++|+++++.|++++||+||+|+||+++|++............  ..+......|.  +|+++|+|++++++||+++.+++
T Consensus       188 ~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~pedvA~~v~fL~s~~a~~  267 (283)
T 3v8b_A          188 VAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVSERARH  267 (283)
T ss_dssp             HHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHHHHHHHHHHHTSGGGTT
T ss_pred             HHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCCCCHHHHHHHHHHHcCccccC
Confidence            999999999999999999999999999999865432211000  01223345566  89999999999999999999999


Q ss_pred             ccccEEEeCCCcee
Q 024994          234 ITGQIICVDGGVTV  247 (259)
Q Consensus       234 ~~G~~l~~dgG~~~  247 (259)
                      +||+.|.+|||.++
T Consensus       268 itG~~i~vdGG~~~  281 (283)
T 3v8b_A          268 VTGSPVWIDGGQGL  281 (283)
T ss_dssp             CCSCEEEESTTHHH
T ss_pred             CcCCEEEECcCccc
Confidence            99999999999864

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=2.4e-51  Score=337.72  Aligned_cols=241  Identities=33%  Similarity=0.463  Sum_probs=223.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeC-ChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSR-NQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||++|||++++++|+++|++|++++| +.+..++..+++...+.++.++++|++|.++++++++++.+.+ +++
T Consensus         5 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~i   83 (246)
T 3osu_A            5 KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQF-GSL   83 (246)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHH-SCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-CCC
Confidence            78999999999999999999999999999877 5677778888887777789999999999999999999999999 799


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      |+||||||.....++.+.+.++|++++++|+.+++.++++++|+|.+++.++||++||..+..+.++...|++||+++++
T Consensus        84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~  163 (246)
T 3osu_A           84 DVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIG  163 (246)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHHHHHH
Confidence            99999999988888899999999999999999999999999999988888999999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      |+++++.|++++||+||+|+||+++|++.....     +...+.+....|.+++++|+|++++++||+++.+.++||+.|
T Consensus       164 ~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~-----~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~~~itG~~i  238 (246)
T 3osu_A          164 LTKSAARELASRGITVNAVAPGFIVSDMTDALS-----DELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTI  238 (246)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSC-----HHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEE
T ss_pred             HHHHHHHHhcccCeEEEEEEECCCcCCcccccC-----HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEE
Confidence            999999999999999999999999999876532     335667778899999999999999999999999999999999


Q ss_pred             EeCCCcee
Q 024994          240 CVDGGVTV  247 (259)
Q Consensus       240 ~~dgG~~~  247 (259)
                      ++|||..+
T Consensus       239 ~vdgG~~~  246 (246)
T 3osu_A          239 HVNGGMYM  246 (246)
T ss_dssp             EESTTSCC
T ss_pred             EeCCCccC
Confidence            99999764

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=6.8e-51  Score=340.98  Aligned_cols=247  Identities=29%  Similarity=0.364  Sum_probs=225.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++...+.++.++++|++|.++++++++++.+.+ +++|
T Consensus         9 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD   87 (280)
T 3tox_A            9 KIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRF-GGLD   87 (280)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-CCCC
Confidence            689999999999999999999999999999999999999988887777789999999999999999999999999 7999


Q ss_pred             EEEEcCCCC-CCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCcc-CCCCCChhhhhhHHHHH
Q 024994           81 ILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV-RGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        81 ~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~-~~~~~~~~Y~~sK~a~~  158 (259)
                      +||||||+. ...++.+.+.++|++++++|+.+++.++++++|+|.+++.++||++||..+. .+.++...|++||++++
T Consensus        88 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~  167 (280)
T 3tox_A           88 TAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLI  167 (280)
T ss_dssp             EEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTTCHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCCchhHHHHHHHHH
Confidence            999999986 4468888999999999999999999999999999999888999999999988 78889999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI  238 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~  238 (259)
                      +|+++++.|++++||+||+|+||+++|++....... ..+.....+....|.+++.+|+|++++++||+++.++++||+.
T Consensus       168 ~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~a~~itG~~  246 (280)
T 3tox_A          168 GLVQALAVELGARGIRVNALLPGGTDTPANFANLPG-AAPETRGFVEGLHALKRIARPEEIAEAALYLASDGASFVTGAA  246 (280)
T ss_dssp             HHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTT-CCTHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccc-cCHHHHHHHhccCccCCCcCHHHHHHHHHHHhCccccCCcCcE
Confidence            999999999999999999999999999987652211 1233556677788999999999999999999999999999999


Q ss_pred             EEeCCCceeee
Q 024994          239 ICVDGGVTVTV  249 (259)
Q Consensus       239 l~~dgG~~~~~  249 (259)
                      |++|||.+++-
T Consensus       247 i~vdGG~~~~~  257 (280)
T 3tox_A          247 LLADGGASVTK  257 (280)
T ss_dssp             EEESTTGGGCC
T ss_pred             EEECCCccccc
Confidence            99999988753

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=5.5e-51  Score=337.66  Aligned_cols=246  Identities=28%  Similarity=0.414  Sum_probs=221.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++...+.++.++++|++|.++++++++++.+.+ +++|
T Consensus         7 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~id   85 (257)
T 3imf_A            7 KVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKF-GRID   85 (257)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence            789999999999999999999999999999999999999888887777789999999999999999999999999 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhH-hCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFK-ASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.++++++|+|. +.+.++||++||..+..+.++...|++||+++++
T Consensus        86 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~  165 (257)
T 3imf_A           86 ILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLA  165 (257)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTCHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCcHHHHHHHHHHHH
Confidence            999999998888889999999999999999999999999999994 4557999999999999999999999999999999


Q ss_pred             HHHHHHHHHc-cCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 024994          160 LTKNLACEWA-KDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI  238 (259)
Q Consensus       160 ~~~~~a~e~~-~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~  238 (259)
                      |+++++.|++ ++|||||+|+||+++|++........  +...+.+....|.+|+.+|+|++++++||+++.+.++||+.
T Consensus       166 l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~--~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~  243 (257)
T 3imf_A          166 MTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWIS--EEMAKRTIQSVPLGRLGTPEEIAGLAYYLCSDEAAYINGTC  243 (257)
T ss_dssp             HHHHHHHHHHHHHCCEEEEEEECCBSSCCCC---------CCSHHHHTTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccC--HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCE
Confidence            9999999997 77999999999999999865421111  11334556778999999999999999999999999999999


Q ss_pred             EEeCCCceeee
Q 024994          239 ICVDGGVTVTV  249 (259)
Q Consensus       239 l~~dgG~~~~~  249 (259)
                      |.+|||.++..
T Consensus       244 i~vdGG~~~~~  254 (257)
T 3imf_A          244 MTMDGGQHLHQ  254 (257)
T ss_dssp             EEESTTTTSCC
T ss_pred             EEECCCcccCC
Confidence            99999988753

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=1.8e-51  Score=342.88  Aligned_cols=242  Identities=34%  Similarity=0.516  Sum_probs=225.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|.++++++++++.+.+ +++|
T Consensus        29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD  107 (270)
T 3ftp_A           29 QVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEF-GALN  107 (270)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHc-CCCC
Confidence            789999999999999999999999999999999999998888887777788999999999999999999999999 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||+....++.+.+.++|++++++|+.+++.++++++|.|.+++.++||++||..+..+.++...|++||+++++|
T Consensus       108 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l  187 (270)
T 3ftp_A          108 VLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGVAGM  187 (270)
T ss_dssp             EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCchhHHHHHHHHHHH
Confidence            99999999888888899999999999999999999999999999888789999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC  240 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~  240 (259)
                      +++++.|++++||+||+|+||+++|++.....     ......+....|.+++.+|+|++++++||+++.+.++||++|+
T Consensus       188 ~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-----~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~  262 (270)
T 3ftp_A          188 TRALAREIGSRGITVNCVAPGFIDTDMTKGLP-----QEQQTALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGTTLH  262 (270)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBCSHHHHHSC-----HHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHHhhhCeEEEEEEeCCCcCcchhhcC-----HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCCCcCCccCcEEE
Confidence            99999999999999999999999999875432     2245666778899999999999999999999999999999999


Q ss_pred             eCCCceee
Q 024994          241 VDGGVTVT  248 (259)
Q Consensus       241 ~dgG~~~~  248 (259)
                      +|||..++
T Consensus       263 vdGG~~~s  270 (270)
T 3ftp_A          263 VNGGMFMS  270 (270)
T ss_dssp             ESTTSSCC
T ss_pred             ECCCcccC
Confidence            99998763

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=8.9e-51  Score=341.41  Aligned_cols=246  Identities=26%  Similarity=0.367  Sum_probs=217.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCC----------------hhHHHHHHHHHHhcCCcEEEEEecCCCHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRN----------------QIELDARLHEWKNKGFKVTGSVCDLSSREQR   64 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~----------------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   64 (259)
                      |++|||||++|||+++|++|+++|++|++++|+                .+.+++..+++...+.++.++++|++|.+++
T Consensus        12 k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   91 (286)
T 3uve_A           12 KVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYDAL   91 (286)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHHHH
Confidence            789999999999999999999999999999887                6777777777777777899999999999999


Q ss_pred             HHHHHHHHHHcCCCccEEEEcCCCCCCC-CCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccC
Q 024994           65 EKLIETVTSIFQGKLNILINNAAIAFVK-PTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVR  142 (259)
Q Consensus        65 ~~~~~~~~~~~~~~id~vi~~ag~~~~~-~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~  142 (259)
                      +++++++.+.+ +++|+||||||+.... ++.+.+.++|++++++|+.+++.++++++|+|.+++ .++||++||..+..
T Consensus        92 ~~~~~~~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  170 (286)
T 3uve_A           92 KAAVDSGVEQL-GRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLK  170 (286)
T ss_dssp             HHHHHHHHHHH-SCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS
T ss_pred             HHHHHHHHHHh-CCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhhcc
Confidence            99999999999 7999999999987665 478899999999999999999999999999998765 68999999999999


Q ss_pred             CCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCc---------CCCCchHHH--HhhhhcCCCC
Q 024994          143 GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE---------EGPEGSEFL--DGIARQTPIG  211 (259)
Q Consensus       143 ~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~---------~~~~~~~~~--~~~~~~~~~~  211 (259)
                      +.++...|++||+++++|+++++.|++++||+||+|+||+++|++.....         ..+......  .......| +
T Consensus       171 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~  249 (286)
T 3uve_A          171 AYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFHTLP-I  249 (286)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHTTCSSS-C
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhHHHHHHhhhccC-C
Confidence            99999999999999999999999999999999999999999999975310         111111111  12334556 8


Q ss_pred             CCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCceee
Q 024994          212 RAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVT  248 (259)
Q Consensus       212 ~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~  248 (259)
                      ++.+|+|++++++||+++.++|+||+.|++|||.+++
T Consensus       250 r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~l~  286 (286)
T 3uve_A          250 PWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCLK  286 (286)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             CcCCHHHHHHHHHHHcCccccCCcCCEEeECCccccc
Confidence            9999999999999999999999999999999998763

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=4.6e-51  Score=339.41  Aligned_cols=245  Identities=24%  Similarity=0.304  Sum_probs=224.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++...+.++.++++|++|.++++++++++.+.+ +++|
T Consensus        12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~id   90 (264)
T 3ucx_A           12 KVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAY-GRVD   90 (264)
T ss_dssp             CEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT-SCCS
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-CCCc
Confidence            789999999999999999999999999999999999999988888878889999999999999999999999999 7999


Q ss_pred             EEEEcCCCC-CCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      +||||||.. ...++.+.+.++|++++++|+.+++.++++++|.|.+++ ++||++||..+..+.+++..|++||+++++
T Consensus        91 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKaa~~~  169 (264)
T 3ucx_A           91 VVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQAKYGAYKMAKSALLA  169 (264)
T ss_dssp             EEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCCTTCHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccCCCccHHHHHHHHHHHH
Confidence            999999985 557888999999999999999999999999999998764 999999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcC------CCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE------GPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASY  233 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  233 (259)
                      |+++++.|++++|||||+|+||+++|++......      ....+...+.+....|.+|+.+|+|++++++||+++.+.+
T Consensus       170 ~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~  249 (264)
T 3ucx_A          170 MSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAILFMASDLASG  249 (264)
T ss_dssp             HHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSSCCBHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCcccCCCHHHHHHHHHHHcCccccC
Confidence            9999999999999999999999999998654321      1122345667778899999999999999999999999999


Q ss_pred             ccccEEEeCCCcee
Q 024994          234 ITGQIICVDGGVTV  247 (259)
Q Consensus       234 ~~G~~l~~dgG~~~  247 (259)
                      +||+.|++|||..+
T Consensus       250 itG~~i~vdGG~~~  263 (264)
T 3ucx_A          250 ITGQALDVNCGEYK  263 (264)
T ss_dssp             CCSCEEEESTTSSC
T ss_pred             CCCCEEEECCCccC
Confidence            99999999999865

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=3e-51  Score=343.10  Aligned_cols=246  Identities=32%  Similarity=0.465  Sum_probs=225.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++...+.++.++++|++|.++++++++++.+.+ +++|
T Consensus        25 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~id  103 (279)
T 3sju_A           25 QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERF-GPIG  103 (279)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH-CSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-CCCc
Confidence            689999999999999999999999999999999999999988888777889999999999999999999999999 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHH--HhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP--LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~--~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.++++++|  .|.+++.++||++||..+..+.++...|++||++++
T Consensus       104 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asKaa~~  183 (279)
T 3sju_A          104 ILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVV  183 (279)
T ss_dssp             EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCCChhHHHHHHHHH
Confidence            999999998888888999999999999999999999999999  577777899999999999999999999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcC------CCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCC
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE------GPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAAS  232 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  232 (259)
                      +|+++++.|++++||+||+|+||+++|++......      ....+...+.+....|.+|+.+|+|++++++||+++.+.
T Consensus       184 ~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~a~  263 (279)
T 3sju_A          184 GFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAGLVGYLVTDAAA  263 (279)
T ss_dssp             HHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSSGGG
T ss_pred             HHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccc
Confidence            99999999999999999999999999998643211      112344566777889999999999999999999999999


Q ss_pred             CccccEEEeCCCcee
Q 024994          233 YITGQIICVDGGVTV  247 (259)
Q Consensus       233 ~~~G~~l~~dgG~~~  247 (259)
                      ++||+.|++|||.++
T Consensus       264 ~itG~~i~vdGG~~~  278 (279)
T 3sju_A          264 SITAQALNVCGGLGN  278 (279)
T ss_dssp             GCCSCEEEESTTCCC
T ss_pred             CcCCcEEEECCCccC
Confidence            999999999999764

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=6.7e-51  Score=340.56  Aligned_cols=246  Identities=30%  Similarity=0.471  Sum_probs=223.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++++|++|.++++++++++.+.+ +++|
T Consensus        28 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD  103 (277)
T 4dqx_A           28 RVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI---GSKAFGVRVDVSSAKDAESMVEKTTAKW-GRVD  103 (277)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence            78999999999999999999999999999999999888777664   5578999999999999999999999999 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||+....++.+.+.++|++++++|+.+++.++++++|+|++++.++||++||..+..+.++...|++||+++++|
T Consensus       104 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l  183 (277)
T 4dqx_A          104 VLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSL  183 (277)
T ss_dssp             EEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCCChhHHHHHHHHHHH
Confidence            99999999888888999999999999999999999999999999988889999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCC-cCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPF-EEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      +++++.|++++||+||+|+||+++|++.... ............+....|.+|+.+|+|++++++||+++.++++||+.|
T Consensus       184 ~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~~~~itG~~i  263 (277)
T 4dqx_A          184 TRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAMLFLASDRSRFATGSIL  263 (277)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCcccCCcCHHHHHHHHHHHhCCccCCCcCCEE
Confidence            9999999999999999999999999984322 222232334444677889999999999999999999999999999999


Q ss_pred             EeCCCceeeec
Q 024994          240 CVDGGVTVTVN  250 (259)
Q Consensus       240 ~~dgG~~~~~~  250 (259)
                      ++|||.++...
T Consensus       264 ~vdGG~~~~~~  274 (277)
T 4dqx_A          264 TVDGGSSIGNH  274 (277)
T ss_dssp             EESSSSSSCCT
T ss_pred             EECCchhhhhc
Confidence            99999887643

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=5.9e-51  Score=343.33  Aligned_cols=244  Identities=34%  Similarity=0.461  Sum_probs=226.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG-FKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++...+ .++.++++|++|.++++++++++.+.+ +++
T Consensus        42 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~i  120 (293)
T 3rih_A           42 RSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAF-GAL  120 (293)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHH-SCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHc-CCC
Confidence            789999999999999999999999999999999999998888887665 689999999999999999999999999 799


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCcc-CCCCCChhhhhhHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV-RGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~-~~~~~~~~Y~~sK~a~~  158 (259)
                      |+||||||+....++.+.+.++|++++++|+.+++.++++++|.|.+++.++||++||..+. .+.++...|++||++++
T Consensus       121 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~~~~~Y~asKaa~~  200 (293)
T 3rih_A          121 DVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQL  200 (293)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCTTCHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCCCCHHHHHHHHHHH
Confidence            99999999988888999999999999999999999999999999998888999999999986 88899999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI  238 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~  238 (259)
                      +|+++++.|++++||+||+|+||+++|++.....     +...+.+....|.+|+++|+|++++++||+++.+.++||++
T Consensus       201 ~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~-----~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~s~~a~~itG~~  275 (293)
T 3rih_A          201 GFMRTAAIELAPRGVTVNAILPGNILTEGLVDMG-----EEYISGMARSIPMGMLGSPVDIGHLAAFLATDEAGYITGQA  275 (293)
T ss_dssp             HHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTC-----HHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHhhhCeEEEEEecCCCcCcchhhcc-----HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCCCCCE
Confidence            9999999999999999999999999999865432     33566777889999999999999999999999999999999


Q ss_pred             EEeCCCceeeec
Q 024994          239 ICVDGGVTVTVN  250 (259)
Q Consensus       239 l~~dgG~~~~~~  250 (259)
                      |.+|||..+...
T Consensus       276 i~vdGG~~~~~~  287 (293)
T 3rih_A          276 IVVDGGQVLPES  287 (293)
T ss_dssp             EEESTTTTCBSS
T ss_pred             EEECCCccCCCC
Confidence            999999987644

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=7.4e-51  Score=338.99  Aligned_cols=239  Identities=35%  Similarity=0.457  Sum_probs=221.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeC-ChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSR-NQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||++|||+++|++|+++|++|++++| +.+..++..+++...+.++.++++|++|.++++++++++.+.+ +++
T Consensus        29 k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~-g~i  107 (269)
T 4dmm_A           29 RIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERW-GRL  107 (269)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH-SCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-CCC
Confidence            78999999999999999999999999999988 6777777888887777789999999999999999999999999 799


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      |+||||||+....++.+.+.++|++++++|+.+++.++++++|+|.+++.++||++||..+..+.++...|++||+++++
T Consensus       108 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~  187 (269)
T 4dmm_A          108 DVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIG  187 (269)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTTCHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCchhHHHHHHHHHH
Confidence            99999999988888889999999999999999999999999999988878999999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCC-CCCCccccE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLP-AASYITGQI  238 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~-~~~~~~G~~  238 (259)
                      |+++++.|++++||+||+|+||+++|++....        ..+.+....|.+|+++|+|++++++||+++ .+.++||+.
T Consensus       188 l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~--------~~~~~~~~~p~~r~~~~~dvA~~v~~l~s~~~~~~itG~~  259 (269)
T 4dmm_A          188 LTKTVAKELASRGITVNAVAPGFIATDMTSEL--------AAEKLLEVIPLGRYGEAAEVAGVVRFLAADPAAAYITGQV  259 (269)
T ss_dssp             HHHHHHHHHGGGTCEEEEEEECCBTTSCSCHH--------HHHHHGGGCTTSSCBCHHHHHHHHHHHHHCGGGGGCCSCE
T ss_pred             HHHHHHHHHhhhCcEEEEEEECCCcCcccccc--------cHHHHHhcCCCCCCCCHHHHHHHHHHHhCCcccCCCcCCE
Confidence            99999999999999999999999999987532        225567788999999999999999999997 788999999


Q ss_pred             EEeCCCceee
Q 024994          239 ICVDGGVTVT  248 (259)
Q Consensus       239 l~~dgG~~~~  248 (259)
                      |++|||..++
T Consensus       260 i~vdGG~~~s  269 (269)
T 4dmm_A          260 INIDGGLVMA  269 (269)
T ss_dssp             EEESTTSCCC
T ss_pred             EEECCCeecC
Confidence            9999998764

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=5.6e-51  Score=341.81  Aligned_cols=244  Identities=28%  Similarity=0.410  Sum_probs=225.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCC---cEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF---KVTGSVCDLSSREQREKLIETVTSIFQG   77 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+.   ++.++++|++|.++++++++++.+.+ +
T Consensus        12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g   90 (281)
T 3svt_A           12 RTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWH-G   90 (281)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHH-S
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHc-C
Confidence            7899999999999999999999999999999999999998888876654   79999999999999999999999999 7


Q ss_pred             CccEEEEcCCC-CCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHH
Q 024994           78 KLNILINNAAI-AFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGA  156 (259)
Q Consensus        78 ~id~vi~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  156 (259)
                      ++|+||||||. ....++.+.+.++|++++++|+.+++.++++++|.|.+++.|+||++||..+..+.++...|++||++
T Consensus        91 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a  170 (281)
T 3svt_A           91 RLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSA  170 (281)
T ss_dssp             CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTCTHHHHHHHH
T ss_pred             CCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCCChhHHHHHHH
Confidence            99999999998 45567888999999999999999999999999999998888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccc
Q 024994          157 MNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG  236 (259)
Q Consensus       157 ~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G  236 (259)
                      +++|+++++.|++++|||||+|+||+++|++.......   ......+....|.+++++|+|++++++||+++.+.++||
T Consensus       171 ~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~---~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~itG  247 (281)
T 3svt_A          171 VDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITES---AELSSDYAMCTPLPRQGEVEDVANMAMFLLSDAASFVTG  247 (281)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTC---HHHHHHHHHHCSSSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccC---HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccCCCCC
Confidence            99999999999999999999999999999987643222   235667778899999999999999999999999999999


Q ss_pred             cEEEeCCCceee
Q 024994          237 QIICVDGGVTVT  248 (259)
Q Consensus       237 ~~l~~dgG~~~~  248 (259)
                      +.|++|||..++
T Consensus       248 ~~~~vdgG~~~~  259 (281)
T 3svt_A          248 QVINVDGGQMLR  259 (281)
T ss_dssp             CEEEESTTGGGS
T ss_pred             CEEEeCCChhcc
Confidence            999999999876

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=3.4e-50  Score=337.01  Aligned_cols=248  Identities=27%  Similarity=0.330  Sum_probs=217.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCC------------hhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRN------------QIELDARLHEWKNKGFKVTGSVCDLSSREQREKLI   68 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   68 (259)
                      |++|||||++|||+++|++|+++|++|++++|+            .+.+++..+++...+.++.++++|++|.+++++++
T Consensus        11 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   90 (281)
T 3s55_A           11 KTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALESFV   90 (281)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence            789999999999999999999999999999997            56667777777777788999999999999999999


Q ss_pred             HHHHHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCCh
Q 024994           69 ETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVS  148 (259)
Q Consensus        69 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~  148 (259)
                      +++.+.+ +++|+||||||+....++.+.+.++|++++++|+.+++.++++++|+|.+++.++||++||..+..+.++..
T Consensus        91 ~~~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  169 (281)
T 3s55_A           91 AEAEDTL-GGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQA  169 (281)
T ss_dssp             HHHHHHH-TCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCTTCH
T ss_pred             HHHHHhc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCCCCCCc
Confidence            9999999 799999999999888888999999999999999999999999999999888789999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCC------cC---CCCchHHHHhh-hhcCCCCCCCCHHH
Q 024994          149 LYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF------EE---GPEGSEFLDGI-ARQTPIGRAGEPDE  218 (259)
Q Consensus       149 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~------~~---~~~~~~~~~~~-~~~~~~~~~~~~~~  218 (259)
                      .|++||+++++|+++++.|++++||+||+|+||+++|++....      ..   .+........+ ......+++.+|+|
T Consensus       170 ~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~d  249 (281)
T 3s55_A          170 SYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAPFLKPEE  249 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHHHHCSSSCSCBCHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHHhhhccCcCCCCHHH
Confidence            9999999999999999999999999999999999999997531      11   11111111111 11222388999999


Q ss_pred             HHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          219 VSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       219 va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      ++++++||+++.+.++||+.|++|||..+++
T Consensus       250 vA~~v~~L~s~~~~~itG~~i~vdgG~~~~~  280 (281)
T 3s55_A          250 VTRAVLFLVDEASSHITGTVLPIDAGATARM  280 (281)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTGGGGC
T ss_pred             HHHHHHHHcCCcccCCCCCEEEECCCcccCC
Confidence            9999999999999999999999999988764

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=4.9e-50  Score=338.90  Aligned_cols=246  Identities=28%  Similarity=0.403  Sum_probs=217.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCC------------hhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRN------------QIELDARLHEWKNKGFKVTGSVCDLSSREQREKLI   68 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   68 (259)
                      |++|||||++|||+++|++|+++|++|++++|+            .+.+++..+++...+.++.++++|++|.+++++++
T Consensus        29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  108 (299)
T 3t7c_A           29 KVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQAAV  108 (299)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHH
Confidence            789999999999999999999999999999987            67777888888777889999999999999999999


Q ss_pred             HHHHHHcCCCccEEEEcCCCCCCCC-CCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccCCCCC
Q 024994           69 ETVTSIFQGKLNILINNAAIAFVKP-TVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPS  146 (259)
Q Consensus        69 ~~~~~~~~~~id~vi~~ag~~~~~~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~~~~~  146 (259)
                      +++.+.+ +++|+||||||+....+ +.+.+.++|++++++|+.+++.++++++|+|.+++ .++||++||..+..+.++
T Consensus       109 ~~~~~~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~  187 (299)
T 3t7c_A          109 DDGVTQL-GRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAEN  187 (299)
T ss_dssp             HHHHHHH-SCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSCCTT
T ss_pred             HHHHHHh-CCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCC
Confidence            9999999 79999999999876654 88899999999999999999999999999987764 689999999999999999


Q ss_pred             ChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCc---------CCCCchHH--HHhhhhcCCCCCCCC
Q 024994          147 VSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE---------EGPEGSEF--LDGIARQTPIGRAGE  215 (259)
Q Consensus       147 ~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~---------~~~~~~~~--~~~~~~~~~~~~~~~  215 (259)
                      ...|++||+++++|+++++.|++++||+||+|+||+++|++.....         ..+.....  ........| +++.+
T Consensus       188 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~r~~~  266 (299)
T 3t7c_A          188 IGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLP-IPYVE  266 (299)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHSSSS-CSCBC
T ss_pred             cchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhhhhcccC-cCCCC
Confidence            9999999999999999999999999999999999999999975321         11111111  112334455 88999


Q ss_pred             HHHHHHHHHHHhCCCCCCccccEEEeCCCceee
Q 024994          216 PDEVSSLVAFLCLPAASYITGQIICVDGGVTVT  248 (259)
Q Consensus       216 ~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~  248 (259)
                      |+|++++++||+++.++++||+.|.+|||.+++
T Consensus       267 pedvA~~v~fL~s~~a~~itG~~i~vdGG~~l~  299 (299)
T 3t7c_A          267 PADISNAILFLVSDDARYITGVSLPVDGGALLK  299 (299)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHHHHHhCcccccCcCCEEeeCCCcccC
Confidence            999999999999999999999999999998763

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=1.7e-50  Score=335.09  Aligned_cols=244  Identities=29%  Similarity=0.392  Sum_probs=220.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++++|++|.++++++++++.+++ +++|
T Consensus         9 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~id   84 (259)
T 4e6p_A            9 KSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI---GPAAYAVQMDVTRQDSIDAAIAATVEHA-GGLD   84 (259)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHS-SSCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCCceEEEeeCCCHHHHHHHHHHHHHHc-CCCC
Confidence            68999999999999999999999999999999999888877766   4578999999999999999999999999 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.++++++|.|.+++ .++||++||..+..+.++...|++||+++++
T Consensus        85 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~  164 (259)
T 4e6p_A           85 ILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATKAAVIS  164 (259)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCChHHHHHHHHHHH
Confidence            999999998888889999999999999999999999999999998765 6899999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCc------CCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE------EGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASY  233 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  233 (259)
                      |+++++.|++++||+||+|+||+++|++.....      ...........+....|.+|+++|+|++++++||+++.+.+
T Consensus       165 ~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~~~~  244 (259)
T 4e6p_A          165 LTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIFLASAESDY  244 (259)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHHHHHTTSGGGTT
T ss_pred             HHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCCccCC
Confidence            999999999999999999999999999865330      00012234566677889999999999999999999999999


Q ss_pred             ccccEEEeCCCceee
Q 024994          234 ITGQIICVDGGVTVT  248 (259)
Q Consensus       234 ~~G~~l~~dgG~~~~  248 (259)
                      +||+.|++|||..++
T Consensus       245 itG~~i~vdgG~~~s  259 (259)
T 4e6p_A          245 IVSQTYNVDGGNWMS  259 (259)
T ss_dssp             CCSCEEEESTTSSCC
T ss_pred             CCCCEEEECcChhcC
Confidence            999999999998764

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=1e-50  Score=335.64  Aligned_cols=243  Identities=31%  Similarity=0.423  Sum_probs=219.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++++|++|.++++++++++.+.+ +++|
T Consensus         9 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~id   84 (255)
T 4eso_A            9 KKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF---GPRVHALRSDIADLNEIAVLGAAAGQTL-GAID   84 (255)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHH-SSEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHHh-CCCC
Confidence            78999999999999999999999999999999999888877766   4479999999999999999999999999 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.++++++|+|++  .++||++||..+..+.++...|++||+++++|
T Consensus        85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~  162 (255)
T 4eso_A           85 LLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE--GGSIVFTSSVADEGGHPGMSVYSASKAALVSF  162 (255)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCGGGSSBCTTBHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc--CCEEEEECChhhcCCCCCchHHHHHHHHHHHH
Confidence            9999999988888999999999999999999999999999999865  48999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCC-CchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGP-EGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      +++++.|++++||+||+|+||+++|++........ .............|.+|+++|+|++++++||+++ ++++||+.|
T Consensus       163 ~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~-~~~itG~~i  241 (255)
T 4eso_A          163 ASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVLFLAFE-ATFTTGAKL  241 (255)
T ss_dssp             HHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHHT-CTTCCSCEE
T ss_pred             HHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCCCCCcCHHHHHHHHHHHcCc-CcCccCCEE
Confidence            99999999999999999999999999875432111 1122344556678999999999999999999998 899999999


Q ss_pred             EeCCCceeeec
Q 024994          240 CVDGGVTVTVN  250 (259)
Q Consensus       240 ~~dgG~~~~~~  250 (259)
                      .+|||...++.
T Consensus       242 ~vdGG~~~~l~  252 (255)
T 4eso_A          242 AVDGGLGQKLS  252 (255)
T ss_dssp             EESTTTTTTBC
T ss_pred             EECCCccccCc
Confidence            99999887653

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=7.3e-51  Score=335.04  Aligned_cols=238  Identities=29%  Similarity=0.407  Sum_probs=216.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++++|++|.++++++++++.+.+ +++|
T Consensus         7 k~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~id   82 (247)
T 3rwb_A            7 KTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI---GKKARAIAADISDPGSVKALFAEIQALT-GGID   82 (247)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEECCCCTTCHHHHHHHHHHHHHHH-SCCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHC-CCCC
Confidence            79999999999999999999999999999999999888877766   5589999999999999999999999999 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.++++++|+|.+++ .++||++||..+..+.+++..|++||+++++
T Consensus        83 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~  162 (247)
T 3rwb_A           83 ILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIG  162 (247)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTCHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCchhhHHHHHHHHH
Confidence            999999998888888999999999999999999999999999998765 6999999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      |+++++.|++++|||||+|+||+++|++........    .........|+++..+|+|+++++.||+++.++++||+.|
T Consensus       163 ~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~----~~~~~~~~~~~~r~~~pedva~~v~~L~s~~~~~itG~~i  238 (247)
T 3rwb_A          163 FTRALATELGKYNITANAVTPGLIESDGVKASPHNE----AFGFVEMLQAMKGKGQPEHIADVVSFLASDDARWITGQTL  238 (247)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGG----GHHHHHHHSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhH----HHHHHhcccccCCCcCHHHHHHHHHHHhCccccCCCCCEE
Confidence            999999999999999999999999999876532211    2222233378999999999999999999999999999999


Q ss_pred             EeCCCce
Q 024994          240 CVDGGVT  246 (259)
Q Consensus       240 ~~dgG~~  246 (259)
                      .+|||..
T Consensus       239 ~vdGG~~  245 (247)
T 3rwb_A          239 NVDAGMV  245 (247)
T ss_dssp             EESTTSS
T ss_pred             EECCCcc
Confidence            9999975

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=1.4e-50  Score=336.84  Aligned_cols=238  Identities=29%  Similarity=0.380  Sum_probs=209.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++   +.++.++++|++|.++++++++++.+.+ +++|
T Consensus        28 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD  103 (266)
T 3grp_A           28 RKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL---GKDVFVFSANLSDRKSIKQLAEVAEREM-EGID  103 (266)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CSSEEEEECCTTSHHHHHHHHHHHHHHH-TSCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEeecCCHHHHHHHHHHHHHHc-CCCC
Confidence            78999999999999999999999999999999999888776654   5589999999999999999999999999 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.++++++|.|.+++.++||++||..+..+.++...|++||+++++|
T Consensus       104 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~~  183 (266)
T 3grp_A          104 ILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGLIGF  183 (266)
T ss_dssp             EEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------CHHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCCchhHHHHHHHHHHH
Confidence            99999999887888899999999999999999999999999999888889999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC  240 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~  240 (259)
                      +++++.|++++||+||+|+||+++|++....     .+...+.+....|.+|+++|+|++++++||+++.+.++||+.|.
T Consensus       184 ~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~-----~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s~~~~~itG~~i~  258 (266)
T 3grp_A          184 SKALAQEIASRNITVNCIAPGFIKSAMTDKL-----NEKQKEAIMAMIPMKRMGIGEEIAFATVYLASDEAAYLTGQTLH  258 (266)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBCSHHHHTC-----CHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHhhhhCcEEEEEeeCcCCCchhhcc-----CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEE
Confidence            9999999999999999999999999987543     22356667788999999999999999999999999999999999


Q ss_pred             eCCCcee
Q 024994          241 VDGGVTV  247 (259)
Q Consensus       241 ~dgG~~~  247 (259)
                      +|||.++
T Consensus       259 vdGG~~~  265 (266)
T 3grp_A          259 INGGMAM  265 (266)
T ss_dssp             ESTTC--
T ss_pred             ECCCeee
Confidence            9999865

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=6.8e-51  Score=340.65  Aligned_cols=246  Identities=28%  Similarity=0.386  Sum_probs=224.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKN-KGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++.. .+.++.++++|++|.++++++++++.+.+ +++
T Consensus        28 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~i  106 (277)
T 4fc7_A           28 KVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEF-GRI  106 (277)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH-SCC
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-CCC
Confidence            7899999999999999999999999999999999988888777754 36689999999999999999999999999 799


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      |+||||||.....++.+.+.++|++++++|+.+++.++++++|.|.+++.++||++||..+..+.++...|++||+++++
T Consensus       107 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~  186 (277)
T 4fc7_A          107 DILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDA  186 (277)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTTCHHHHHHHHHHHH
T ss_pred             CEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCcHHHHHHHHHHHH
Confidence            99999999888788889999999999999999999999999999987778999999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      |+++++.|++++|||||+|+||+++|++......  .............|++|+++|+|++++++||+++.++++||+.|
T Consensus       187 l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~s~~~~~itG~~i  264 (277)
T 4fc7_A          187 MTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLG--GPQASLSTKVTASPLQRLGNKTEIAHSVLYLASPLASYVTGAVL  264 (277)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHS--CCHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHhhhcCeEEEEEEECCEecchhhhhcc--CCHHHHHHHhccCCCCCCcCHHHHHHHHHHHcCCccCCcCCCEE
Confidence            9999999999999999999999999986432211  11235566777899999999999999999999999999999999


Q ss_pred             EeCCCceeee
Q 024994          240 CVDGGVTVTV  249 (259)
Q Consensus       240 ~~dgG~~~~~  249 (259)
                      .+|||..++.
T Consensus       265 ~vdGG~~~~~  274 (277)
T 4fc7_A          265 VADGGAWLTF  274 (277)
T ss_dssp             EESTTHHHHC
T ss_pred             EECCCcccCC
Confidence            9999998764

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.4e-50  Score=337.04  Aligned_cols=246  Identities=28%  Similarity=0.354  Sum_probs=212.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeC-ChhHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSR-NQIELDARLHEWKNK-GFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||++|||+++|++|+++|++|++++| +.+.++...+++... +.++.++++|++|.++++++++++.+.+ ++
T Consensus        26 k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~  104 (281)
T 3v2h_A           26 KTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRF-GG  104 (281)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHT-SS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHC-CC
Confidence            78999999999999999999999999999999 667777777777654 5689999999999999999999999999 79


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      +|+||||||+....++.+.+.++|++++++|+.+++.++++++|.|.+++.++||++||..+..+.++...|++||++++
T Consensus       105 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~  184 (281)
T 3v2h_A          105 ADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIM  184 (281)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCCchHHHHHHHHHH
Confidence            99999999998888888999999999999999999999999999999888899999999999999999999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCC-------chHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCC
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPE-------GSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAA  231 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  231 (259)
                      +|+++++.|++++||+||+|+||+++|++.........       .+...+.+....|.+++.+|+|++++++||+++.+
T Consensus       185 ~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s~~a  264 (281)
T 3v2h_A          185 GLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASLALYLAGDDA  264 (281)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTTCSCBCHHHHHHHHHHHHSSGG
T ss_pred             HHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHcCCCc
Confidence            99999999999999999999999999999765432211       01112235567899999999999999999999999


Q ss_pred             CCccccEEEeCCCcee
Q 024994          232 SYITGQIICVDGGVTV  247 (259)
Q Consensus       232 ~~~~G~~l~~dgG~~~  247 (259)
                      .++||+.|++|||+++
T Consensus       265 ~~itG~~i~vdGG~~~  280 (281)
T 3v2h_A          265 AQITGTHVSMDGGWTA  280 (281)
T ss_dssp             GGCCSCEEEESTTGGG
T ss_pred             CCCCCcEEEECCCccC
Confidence            9999999999999764

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=2.7e-50  Score=336.70  Aligned_cols=240  Identities=32%  Similarity=0.485  Sum_probs=221.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++++|++|.++++++++++.+.+ +++|
T Consensus        33 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~-g~iD  111 (276)
T 3r1i_A           33 KRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGEL-GGID  111 (276)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH-SCCS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-CCCC
Confidence            789999999999999999999999999999999999999888888877789999999999999999999999999 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccCCC--CCChhhhhhHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGI--PSVSLYGAYKGAM  157 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~~~--~~~~~Y~~sK~a~  157 (259)
                      +||||||+....++.+.+.++|++++++|+.+++.++++++|.|.+++ .++||++||..+..+.  ++...|++||+++
T Consensus       112 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~asKaa~  191 (276)
T 3r1i_A          112 IAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAV  191 (276)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSCCHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCCcchHHHHHHHH
Confidence            999999998888888999999999999999999999999999998765 4899999999887664  3678999999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcccc
Q 024994          158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ  237 (259)
Q Consensus       158 ~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~  237 (259)
                      ++|+++++.|++++|||||+|+||+++|++.....      .....+....|.+|+.+|+|++++++||+++.++++||+
T Consensus       192 ~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~------~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~~~~itG~  265 (276)
T 3r1i_A          192 VHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLA------DYHALWEPKIPLGRMGRPEELTGLYLYLASAASSYMTGS  265 (276)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGG------GGHHHHGGGSTTSSCBCGGGSHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccch------HHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCc
Confidence            99999999999999999999999999999986542      145666778899999999999999999999999999999


Q ss_pred             EEEeCCCcee
Q 024994          238 IICVDGGVTV  247 (259)
Q Consensus       238 ~l~~dgG~~~  247 (259)
                      .|.+|||.+.
T Consensus       266 ~i~vdGG~~~  275 (276)
T 3r1i_A          266 DIVIDGGYTC  275 (276)
T ss_dssp             EEEESTTTTC
T ss_pred             EEEECcCccC
Confidence            9999999764

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.9e-50  Score=338.40  Aligned_cols=242  Identities=26%  Similarity=0.380  Sum_probs=198.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeC-ChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSR-NQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||++|||++++++|+++|++|++++| +.+.+++..+++...+.++.++++|++|.++++++++++.+.+ +++
T Consensus        30 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~i  108 (280)
T 4da9_A           30 PVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEF-GRI  108 (280)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHH-SCC
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc-CCC
Confidence            68999999999999999999999999999995 7778888888888777889999999999999999999999999 799


Q ss_pred             cEEEEcCCC--CCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC---CCEEEEecCCCccCCCCCChhhhhhH
Q 024994           80 NILINNAAI--AFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG---NGSIVFISSVGGVRGIPSVSLYGAYK  154 (259)
Q Consensus        80 d~vi~~ag~--~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~~~ii~isS~~~~~~~~~~~~Y~~sK  154 (259)
                      |+||||||+  ....++.+.+.++|++++++|+.+++.++++++|.|.+++   .++||++||..+..+.++...|++||
T Consensus       109 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK  188 (280)
T 4da9_A          109 DCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDYCMSK  188 (280)
T ss_dssp             CEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------CCHHHHHHH
T ss_pred             CEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCCccHHHHHH
Confidence            999999998  4556888899999999999999999999999999998755   68999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhh-cCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 024994          155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIAR-QTPIGRAGEPDEVSSLVAFLCLPAASY  233 (259)
Q Consensus       155 ~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~va~~~~~l~~~~~~~  233 (259)
                      +++++|+++++.|++++||+||+|+||+++|++.......     ....... ..|.+|+++|+|++++++||+++.+.+
T Consensus       189 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-----~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~  263 (280)
T 4da9_A          189 AGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGK-----YDGLIESGLVPMRRWGEPEDIGNIVAGLAGGQFGF  263 (280)
T ss_dssp             HHHHHHHHHHHHHHTTTTEEEEEEEECCBCC---------------------------CCBCHHHHHHHHHHHHTSTTGG
T ss_pred             HHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchh-----HHHHHhhcCCCcCCcCCHHHHHHHHHHHhCccccC
Confidence            9999999999999999999999999999999998654322     1222333 678999999999999999999999999


Q ss_pred             ccccEEEeCCCceee
Q 024994          234 ITGQIICVDGGVTVT  248 (259)
Q Consensus       234 ~~G~~l~~dgG~~~~  248 (259)
                      +||+.|++|||.++.
T Consensus       264 itG~~i~vdGG~~~~  278 (280)
T 4da9_A          264 ATGSVIQADGGLSIG  278 (280)
T ss_dssp             GTTCEEEESTTCC--
T ss_pred             CCCCEEEECCCcccC
Confidence            999999999998763

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=1.5e-50  Score=338.51  Aligned_cols=245  Identities=26%  Similarity=0.351  Sum_probs=216.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeC-------------ChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSR-------------NQIELDARLHEWKNKGFKVTGSVCDLSSREQREKL   67 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r-------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   67 (259)
                      |++|||||++|||+++|++|+++|++|++++|             +.+.+++..+++...+.++.++.+|++|.++++++
T Consensus        12 k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (277)
T 3tsc_A           12 RVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLRKV   91 (277)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence            78999999999999999999999999999998             67777787777777778899999999999999999


Q ss_pred             HHHHHHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccCCCCC
Q 024994           68 IETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPS  146 (259)
Q Consensus        68 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~~~~~  146 (259)
                      ++++.+.+ +++|+||||||+....++.+.+.++|++++++|+.+++.++++++|.|.+++ .++||++||..+..+.++
T Consensus        92 ~~~~~~~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  170 (277)
T 3tsc_A           92 VDDGVAAL-GRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPF  170 (277)
T ss_dssp             HHHHHHHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCSS
T ss_pred             HHHHHHHc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCCCCC
Confidence            99999999 7999999999998888888999999999999999999999999999998765 689999999999999999


Q ss_pred             ChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCC------CCchHHHHhhhhcCCCCCCCCHHHHH
Q 024994          147 VSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEG------PEGSEFLDGIARQTPIGRAGEPDEVS  220 (259)
Q Consensus       147 ~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~va  220 (259)
                      ...|++||+++++|+++++.|++++||+||+|+||+++|++.......      ...+.....+....|. ++.+|+|++
T Consensus       171 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-r~~~pedvA  249 (277)
T 3tsc_A          171 MIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPD-WVAEPEDIA  249 (277)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCCSSSC-SCBCHHHHH
T ss_pred             chhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHhhhccCC-CCCCHHHHH
Confidence            999999999999999999999999999999999999999987531000      0001112223334454 789999999


Q ss_pred             HHHHHHhCCCCCCccccEEEeCCCcee
Q 024994          221 SLVAFLCLPAASYITGQIICVDGGVTV  247 (259)
Q Consensus       221 ~~~~~l~~~~~~~~~G~~l~~dgG~~~  247 (259)
                      ++++||+++.++++||+.|.+|||.++
T Consensus       250 ~~v~~L~s~~~~~itG~~i~vdGG~~~  276 (277)
T 3tsc_A          250 DTVCWLASDESRKVTAAQIPVDQGSTQ  276 (277)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHhCccccCCcCCEEeeCCCccc
Confidence            999999999999999999999999764

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=1.5e-50  Score=337.81  Aligned_cols=242  Identities=31%  Similarity=0.423  Sum_probs=218.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||+++|++|+++|++|++++|+ +..++..+++...+.++.++++|++|.++++++.+. .+.+ +++|
T Consensus        32 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~-~~~~-g~iD  108 (273)
T 3uf0_A           32 RTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADGGGSAEAVVADLADLEGAANVAEE-LAAT-RRVD  108 (273)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHH-HHHH-SCCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH-HHhc-CCCc
Confidence            689999999999999999999999999999976 455667777777777899999999999999999544 4556 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||+....++.+.+.++|++++++|+.+++.++++++|.|.+++.++||++||..+..+.++...|++||+++++|
T Consensus       109 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa~~~l  188 (273)
T 3uf0_A          109 VLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGL  188 (273)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSCHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCCChhHHHHHHHHHHH
Confidence            99999999888889999999999999999999999999999999988889999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC  240 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~  240 (259)
                      +++++.|++++||+||+|+||+++|++.......   +.....+....|.+|+.+|+|++++++||+++.+.++||+.|+
T Consensus       189 ~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~---~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~a~~itG~~i~  265 (273)
T 3uf0_A          189 TRALASEWAGRGVGVNALAPGYVVTANTAALRAD---DERAAEITARIPAGRWATPEDMVGPAVFLASDAASYVHGQVLA  265 (273)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTS---HHHHHHHHHHSTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccC---HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCCcCCEEE
Confidence            9999999999999999999999999987544322   2356677788999999999999999999999999999999999


Q ss_pred             eCCCceee
Q 024994          241 VDGGVTVT  248 (259)
Q Consensus       241 ~dgG~~~~  248 (259)
                      +|||..++
T Consensus       266 vdGG~~~s  273 (273)
T 3uf0_A          266 VDGGWLAS  273 (273)
T ss_dssp             ESTTGGGC
T ss_pred             ECcCccCC
Confidence            99998753

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=9.6e-50  Score=328.18  Aligned_cols=242  Identities=34%  Similarity=0.456  Sum_probs=226.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.+.++.++++|++|.++++++++++.+.+ +++|
T Consensus         6 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id   84 (247)
T 3lyl_A            6 KVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAEN-LAID   84 (247)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTT-CCCS
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence            789999999999999999999999999999999999999888888878889999999999999999999999988 7899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||+....++.+.+.++|++++++|+.+++.+++.++|.|.+++.++||++||..+..+.++...|++||+++++|
T Consensus        85 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  164 (247)
T 3lyl_A           85 ILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGF  164 (247)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCcHHHHHHHHHHHHH
Confidence            99999999888888889999999999999999999999999999888789999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC  240 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~  240 (259)
                      +++++.|++++||++|+|+||+++|++.....     +.....+....|.+++.+|+|++++++|++++.+.+++|+.|+
T Consensus       165 ~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~~tG~~i~  239 (247)
T 3lyl_A          165 SKSLAYEVASRNITVNVVAPGFIATDMTDKLT-----DEQKSFIATKIPSGQIGEPKDIAAAVAFLASEEAKYITGQTLH  239 (247)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBCCTTTTTSC-----HHHHHHHHTTSTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHHHHcCeEEEEEeeCcEecccchhcc-----HHHHHHHhhcCCCCCCcCHHHHHHHHHHHhCCCcCCccCCEEE
Confidence            99999999999999999999999999986542     2345566778899999999999999999999999999999999


Q ss_pred             eCCCceee
Q 024994          241 VDGGVTVT  248 (259)
Q Consensus       241 ~dgG~~~~  248 (259)
                      +|||..++
T Consensus       240 vdgG~~~~  247 (247)
T 3lyl_A          240 VNGGMYMA  247 (247)
T ss_dssp             ESTTSSCC
T ss_pred             ECCCEecC
Confidence            99998764

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.5e-50  Score=338.48  Aligned_cols=243  Identities=29%  Similarity=0.408  Sum_probs=216.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++++|++|.++++++++++.+.+ +++|
T Consensus        30 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD  105 (277)
T 3gvc_A           30 KVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI---GCGAAACRVDVSDEQQIIAMVDACVAAF-GGVD  105 (277)
T ss_dssp             CEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CSSCEEEECCTTCHHHHHHHHHHHHHHH-SSCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCcceEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence            78999999999999999999999999999999999888877766   5578899999999999999999999999 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||+....++.+.+.++|++++++|+.+++.++++++|.|.+++.++||++||..+..+.++...|++||+++++|
T Consensus       106 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l  185 (277)
T 3gvc_A          106 KLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQL  185 (277)
T ss_dssp             EEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCchhHHHHHHHHHHH
Confidence            99999999888889999999999999999999999999999999988889999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhh---cCCCCCCCCHHHHHHHHHHHhCCCCCCcccc
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIAR---QTPIGRAGEPDEVSSLVAFLCLPAASYITGQ  237 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~  237 (259)
                      +++++.|++++||+||+|+||+++|++.......... ........   ..|.+|+.+|+|++++++||+++.+.++||+
T Consensus       186 ~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~a~~itG~  264 (277)
T 3gvc_A          186 SRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDG-ALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSDDASMITGT  264 (277)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC-------CCHHHHHHHHHSSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchh-hHHHHhhhhhhhccccCCCCHHHHHHHHHHHcCCccCCccCc
Confidence            9999999999999999999999999986442211000 01111112   4567899999999999999999999999999


Q ss_pred             EEEeCCCceee
Q 024994          238 IICVDGGVTVT  248 (259)
Q Consensus       238 ~l~~dgG~~~~  248 (259)
                      .|.+|||...+
T Consensus       265 ~i~vdGG~~~~  275 (277)
T 3gvc_A          265 TQIADGGTIAA  275 (277)
T ss_dssp             EEEESTTGGGS
T ss_pred             EEEECCcchhc
Confidence            99999998765

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=6.3e-50  Score=333.00  Aligned_cols=238  Identities=26%  Similarity=0.384  Sum_probs=212.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEe-eCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTC-SRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||++|||+++|++|+++|++|+++ .|+.+..++..+++...+.++.++++|++|.++++++++++.+.+ +++
T Consensus        28 k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g~i  106 (267)
T 3u5t_A           28 KVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAF-GGV  106 (267)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-SCE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-CCC
Confidence            689999999999999999999999999987 567777788888887777889999999999999999999999999 799


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      |+||||||+....++.+.+.++|++++++|+.+++.++++++|.|++  .++||++||..+..+.++...|++||+++++
T Consensus       107 D~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~  184 (267)
T 3u5t_A          107 DVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRV--GGRIINMSTSQVGLLHPSYGIYAAAKAGVEA  184 (267)
T ss_dssp             EEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCTHHHHCCTTCHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CCeEEEEeChhhccCCCCchHHHHHHHHHHH
Confidence            99999999988888899999999999999999999999999999965  4899999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      |+++++.|++++|||||+|+||+++|++.......    ...+.+....|.+|+.+|+|++++++||+++.+.++||++|
T Consensus       185 l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~----~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i  260 (267)
T 3u5t_A          185 MTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSD----EVRDRFAKLAPLERLGTPQDIAGAVAFLAGPDGAWVNGQVL  260 (267)
T ss_dssp             HHHHHHHHTTTSCCEEEEEEECCBC---------------CHHHHHTSSTTCSCBCHHHHHHHHHHHHSTTTTTCCSEEE
T ss_pred             HHHHHHHHhhhhCCEEEEEEECCCcCccccccCCH----HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEE
Confidence            99999999999999999999999999987543222    24556677889999999999999999999999999999999


Q ss_pred             EeCCCc
Q 024994          240 CVDGGV  245 (259)
Q Consensus       240 ~~dgG~  245 (259)
                      .+|||.
T Consensus       261 ~vdGG~  266 (267)
T 3u5t_A          261 RANGGI  266 (267)
T ss_dssp             EESSSC
T ss_pred             EeCCCc
Confidence            999995

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=8.4e-50  Score=332.84  Aligned_cols=243  Identities=27%  Similarity=0.397  Sum_probs=218.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeC-ChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSR-NQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||++|||++++++|+++|++|+++++ +.+.+++..+++...+.++.++++|++|.++++++++++.+++ +++
T Consensus        19 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~i   97 (270)
T 3is3_A           19 KVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHF-GHL   97 (270)
T ss_dssp             CEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH-SCC
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-CCC
Confidence            78999999999999999999999999999765 5666777788887778889999999999999999999999999 799


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCC-ccCCCCCChhhhhhHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVG-GVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~-~~~~~~~~~~Y~~sK~a~~  158 (259)
                      |+||||||+....++.+.+.++|++++++|+.+++.++++++|+|.+  .++||++||.. +..+.++...|++||++++
T Consensus        98 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~  175 (270)
T 3is3_A           98 DIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE--GGRIVLTSSNTSKDFSVPKHSLYSGSKGAVD  175 (270)
T ss_dssp             CEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCTTTTTCCCTTCHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCeEEEEeCchhccCCCCCCchhHHHHHHHH
Confidence            99999999988888899999999999999999999999999999965  58999999988 6678889999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcC-------CCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCC
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE-------GPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAA  231 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  231 (259)
                      +|+++++.|++++|||||+|+||+++|++......       ....+...+.+....|.+|+++|+|++++++||+++.+
T Consensus       176 ~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~  255 (270)
T 3is3_A          176 SFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVVGFLVSKEG  255 (270)
T ss_dssp             HHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHTSGGG
T ss_pred             HHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCcc
Confidence            99999999999999999999999999998752210       11223455566778899999999999999999999999


Q ss_pred             CCccccEEEeCCCce
Q 024994          232 SYITGQIICVDGGVT  246 (259)
Q Consensus       232 ~~~~G~~l~~dgG~~  246 (259)
                      +++||+.|.+|||..
T Consensus       256 ~~itG~~i~vdGG~~  270 (270)
T 3is3_A          256 EWVNGKVLTLDGGAA  270 (270)
T ss_dssp             TTCCSCEEEESTTCC
T ss_pred             CCccCcEEEeCCCCC
Confidence            999999999999963

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=2.2e-49  Score=330.84  Aligned_cols=248  Identities=58%  Similarity=0.935  Sum_probs=217.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++...+.++.++++|++|.++++++++++.+.+++++|
T Consensus        22 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id  101 (273)
T 1ae1_A           22 TTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLN  101 (273)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCC
T ss_pred             CEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCc
Confidence            68999999999999999999999999999999999888888888766778999999999999999999999998845899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.++++++|+|++++.++||++||..+..+.++...|++||+++++|
T Consensus       102 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~  181 (273)
T 1ae1_A          102 ILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQM  181 (273)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCCcchhHHHHHHHHHH
Confidence            99999999877788899999999999999999999999999999887779999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcC-CCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE-GPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      +++++.|++++||+||+|+||+++|++...... .+......+.+....|.+++.+|+|++++++|++++.+.+++|+++
T Consensus       182 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i  261 (273)
T 1ae1_A          182 TKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASYITGQII  261 (273)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcCCCEE
Confidence            999999999999999999999999998754322 1112234455566789999999999999999999988899999999


Q ss_pred             EeCCCceee
Q 024994          240 CVDGGVTVT  248 (259)
Q Consensus       240 ~~dgG~~~~  248 (259)
                      .+|||..+.
T Consensus       262 ~vdGG~~~~  270 (273)
T 1ae1_A          262 WADGGFTAN  270 (273)
T ss_dssp             EESTTGGGC
T ss_pred             EECCCcccC
Confidence            999998753

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=2.2e-49  Score=330.42  Aligned_cols=237  Identities=30%  Similarity=0.413  Sum_probs=217.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|.++++++++++.+.+ +++|
T Consensus        12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~id   87 (271)
T 3tzq_B           12 KVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV---GRGAVHHVVDLTNEVSVRALIDFTIDTF-GRLD   87 (271)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCCeEEEECCCCCHHHHHHHHHHHHHHc-CCCC
Confidence            78999999999999999999999999999999999888877666   5578899999999999999999999999 7999


Q ss_pred             EEEEcCCCCC--CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           81 ILINNAAIAF--VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        81 ~vi~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      +||||||...  ..++.+.+.++|++++++|+.+++.++++++|+|.+++.++||++||..+..+.++...|++||++++
T Consensus        88 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~  167 (271)
T 3tzq_B           88 IVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIE  167 (271)
T ss_dssp             EEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSSCHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCCChHHHHHHHHHH
Confidence            9999999873  34667889999999999999999999999999999888899999999999999999999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI  238 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~  238 (259)
                      +|+++++.|++++||+||+|+||+++|++.....    .+...+.+....|.+|+.+|+|++++++||+++.+.++||+.
T Consensus       168 ~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s~~~~~itG~~  243 (271)
T 3tzq_B          168 TLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGL----PQPIVDIFATHHLAGRIGEPHEIAELVCFLASDRAAFITGQV  243 (271)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECCBCCTTTC-------CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHhhcCEEEEEEEeCCCcCccccccC----CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccCCcCCCE
Confidence            9999999999999999999999999999876322    233566777888999999999999999999999999999999


Q ss_pred             EEeCCCc
Q 024994          239 ICVDGGV  245 (259)
Q Consensus       239 l~~dgG~  245 (259)
                      |.+|||.
T Consensus       244 i~vdGG~  250 (271)
T 3tzq_B          244 IAADSGL  250 (271)
T ss_dssp             EEESTTT
T ss_pred             EEECCCc
Confidence            9999993

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=7.4e-50  Score=334.85  Aligned_cols=245  Identities=28%  Similarity=0.400  Sum_probs=215.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeC-------------ChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSR-------------NQIELDARLHEWKNKGFKVTGSVCDLSSREQREKL   67 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r-------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   67 (259)
                      |++|||||++|||++++++|+++|++|++++|             +.+.+++..+++...+.++.++++|++|.++++++
T Consensus        16 k~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   95 (280)
T 3pgx_A           16 RVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALREL   95 (280)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence            78999999999999999999999999999998             67788888888887788899999999999999999


Q ss_pred             HHHHHHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccCCCCC
Q 024994           68 IETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPS  146 (259)
Q Consensus        68 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~~~~~  146 (259)
                      ++++.+.+ +++|+||||||.....++.+.+.++|++++++|+.+++.++++++|+|.+++ .++||++||..+..+.++
T Consensus        96 ~~~~~~~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  174 (280)
T 3pgx_A           96 VADGMEQF-GRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPG  174 (280)
T ss_dssp             HHHHHHHH-CCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTT
T ss_pred             HHHHHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccCCCC
Confidence            99999999 7999999999998888889999999999999999999999999999998765 789999999999999999


Q ss_pred             ChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCC---CchHHHHh--hhhcCCCCCCCCHHHHHH
Q 024994          147 VSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGP---EGSEFLDG--IARQTPIGRAGEPDEVSS  221 (259)
Q Consensus       147 ~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~---~~~~~~~~--~~~~~~~~~~~~~~~va~  221 (259)
                      ...|++||+++++|+++++.|++++||+||+|+||+++|++........   ......+.  .....|. ++.+|+|+++
T Consensus       175 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-r~~~p~dvA~  253 (280)
T 3pgx_A          175 NGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQPN-GFMTADEVAD  253 (280)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGSCCBTTBCS-SCBCHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhhhhcccCCC-CCCCHHHHHH
Confidence            9999999999999999999999999999999999999999875310000   00000111  1122344 6889999999


Q ss_pred             HHHHHhCCCCCCccccEEEeCCCcee
Q 024994          222 LVAFLCLPAASYITGQIICVDGGVTV  247 (259)
Q Consensus       222 ~~~~l~~~~~~~~~G~~l~~dgG~~~  247 (259)
                      +++||+++.+.++||+.|.+|||...
T Consensus       254 ~v~~L~s~~~~~itG~~i~vdGG~~~  279 (280)
T 3pgx_A          254 VVAWLAGDGSGTLTGTQIPVDKGALK  279 (280)
T ss_dssp             HHHHHHSGGGTTCSSCEEEESTTGGG
T ss_pred             HHHHHhCccccCCCCCEEEECCCccC
Confidence            99999999999999999999999753

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.6e-49  Score=329.12  Aligned_cols=237  Identities=32%  Similarity=0.414  Sum_probs=215.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCC-hhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRN-QIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||++|||++++++|+++|++|++++++ .+..++..+++...+.++.++++|++|.++++++++++.+.+ +++
T Consensus        32 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~i  110 (271)
T 3v2g_A           32 KTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEAL-GGL  110 (271)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-SCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-CCC
Confidence            789999999999999999999999999998654 567777788887778889999999999999999999999999 799


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCC-CCCChhhhhhHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-IPSVSLYGAYKGAMN  158 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~-~~~~~~Y~~sK~a~~  158 (259)
                      |+||||||+....++.+.+.++|++++++|+.+++.++++++|.|.+  .++||++||..+..+ .++...|++||++++
T Consensus       111 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~--~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~  188 (271)
T 3v2g_A          111 DILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD--GGRIITIGSNLAELVPWPGISLYSASKAALA  188 (271)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCGGGTCCCSTTCHHHHHHHHHHH
T ss_pred             cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEeChhhccCCCCCchHHHHHHHHHH
Confidence            99999999988888899999999999999999999999999999964  589999999877655 788999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI  238 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~  238 (259)
                      +|+++++.|++++|||||+|+||+++|++.....   .   ..+......|.+|+++|+|++++++||+++.++++||+.
T Consensus       189 ~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~---~---~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~~~~itG~~  262 (271)
T 3v2g_A          189 GLTKGLARDLGPRGITVNIVHPGSTDTDMNPADG---D---HAEAQRERIATGSYGEPQDIAGLVAWLAGPQGKFVTGAS  262 (271)
T ss_dssp             HHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSC---S---SHHHHHHTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHhhhhCeEEEEEecCCCcCCcccccc---h---hHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccCCccCCE
Confidence            9999999999999999999999999999876421   1   345566788999999999999999999999999999999


Q ss_pred             EEeCCCce
Q 024994          239 ICVDGGVT  246 (259)
Q Consensus       239 l~~dgG~~  246 (259)
                      |.+|||..
T Consensus       263 i~vdGG~~  270 (271)
T 3v2g_A          263 LTIDGGAN  270 (271)
T ss_dssp             EEESTTTT
T ss_pred             EEeCcCcc
Confidence            99999974

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=2.7e-49  Score=325.43  Aligned_cols=240  Identities=32%  Similarity=0.460  Sum_probs=219.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeC-ChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSR-NQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||++|||++++++|+++|++|++++| +.+++++..+++...+.++.++++|++|.++++++++++.+.+ +++
T Consensus         5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~i   83 (246)
T 2uvd_A            5 KVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVF-GQV   83 (246)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-SCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-CCC
Confidence            78999999999999999999999999999999 8888888777777666789999999999999999999999999 789


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      |+||||||.....++.+.+.++|++++++|+.+++.++++++|.|.+++.++||++||..+..+.++...|++||+++++
T Consensus        84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~  163 (246)
T 2uvd_A           84 DILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIG  163 (246)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTBHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCCCchHHHHHHHHHH
Confidence            99999999987778888999999999999999999999999999988777999999999998888999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      |+++++.|++++||+||+|+||+++|++.....  .   .....+....|.+++.+|+|++++++|++++.+.+++|+.+
T Consensus       164 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~---~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~  238 (246)
T 2uvd_A          164 LTKTSAKELASRNITVNAIAPGFIATDMTDVLD--E---NIKAEMLKLIPAAQFGEAQDIANAVTFFASDQSKYITGQTL  238 (246)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCC--T---THHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHhhhcCeEEEEEEeccccCcchhhcC--H---HHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCCCEE
Confidence            999999999999999999999999999875432  1   13444556678899999999999999999988899999999


Q ss_pred             EeCCCce
Q 024994          240 CVDGGVT  246 (259)
Q Consensus       240 ~~dgG~~  246 (259)
                      .+|||..
T Consensus       239 ~vdgG~~  245 (246)
T 2uvd_A          239 NVDGGMV  245 (246)
T ss_dssp             EESTTSC
T ss_pred             EECcCcc
Confidence            9999975

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=1.3e-49  Score=329.56  Aligned_cols=247  Identities=30%  Similarity=0.444  Sum_probs=220.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhH--HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE--LDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+.  +++..+++...+.++.++++|++|.++++++++++.+.+ ++
T Consensus         3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~   81 (258)
T 3a28_C            3 KVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKL-GG   81 (258)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH-TC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh-CC
Confidence            789999999999999999999999999999999887  777777777666789999999999999999999999999 78


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCC-CEEEEecCCCccCCCCCChhhhhhHHHH
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGN-GSIVFISSVGGVRGIPSVSLYGAYKGAM  157 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~ii~isS~~~~~~~~~~~~Y~~sK~a~  157 (259)
                      +|+||||||.....++.+.+.++|++++++|+.+++.++++++|.|.+++. ++||++||..+..+.++...|++||+++
T Consensus        82 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~  161 (258)
T 3a28_C           82 FDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAV  161 (258)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCCchhHHHHHHHH
Confidence            999999999987778888999999999999999999999999999987766 9999999999999999999999999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcC------CCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCC
Q 024994          158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE------GPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAA  231 (259)
Q Consensus       158 ~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  231 (259)
                      ++|+++++.|++++||+||+|+||+++|++......      ....+...+.+....|.+++.+|+|++++++|++++.+
T Consensus       162 ~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~  241 (258)
T 3a28_C          162 RGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVSFLASENS  241 (258)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCccc
Confidence            999999999999999999999999999998643110      01112234455566789999999999999999999888


Q ss_pred             CCccccEEEeCCCceee
Q 024994          232 SYITGQIICVDGGVTVT  248 (259)
Q Consensus       232 ~~~~G~~l~~dgG~~~~  248 (259)
                      .+++|+.+.+|||..++
T Consensus       242 ~~~tG~~i~vdGG~~~~  258 (258)
T 3a28_C          242 NYVTGQVMLVDGGMLYN  258 (258)
T ss_dssp             TTCCSCEEEESSSSCCC
T ss_pred             CCCCCCEEEECCCEecC
Confidence            99999999999997653

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=2.2e-49  Score=329.73  Aligned_cols=247  Identities=32%  Similarity=0.444  Sum_probs=219.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++...  +.++.++++|++|.++++++++++.+.+ ++
T Consensus        14 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~   92 (267)
T 1iy8_A           14 RVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF-GR   92 (267)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH-SC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHc-CC
Confidence            78999999999999999999999999999999999888877777654  5678999999999999999999999999 79


Q ss_pred             ccEEEEcCCCCCC-CCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHH
Q 024994           79 LNILINNAAIAFV-KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAM  157 (259)
Q Consensus        79 id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~  157 (259)
                      +|+||||||.... .++.+.+.++|++++++|+.+++.++++++|.|.+++.++||++||..+..+.++...|++||+++
T Consensus        93 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~  172 (267)
T 1iy8_A           93 IDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGV  172 (267)
T ss_dssp             CSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHHHHHH
T ss_pred             CCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCCCCccHHHHHHHH
Confidence            9999999998766 678889999999999999999999999999999887789999999999999999999999999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEeCCceeCCCCCCC--c-CCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 024994          158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF--E-EGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYI  234 (259)
Q Consensus       158 ~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~  234 (259)
                      ++|+++++.|++++||+||+|+||+++|++....  . .........+.+....|.+++.+|+|++++++|++++.+.++
T Consensus       173 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s~~~~~~  252 (267)
T 1iy8_A          173 VGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDASYV  252 (267)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGGGTTC
T ss_pred             HHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCCCCCCcCHHHHHHHHHHHcCccccCC
Confidence            9999999999999999999999999999986432  1 111111112245566789999999999999999999888999


Q ss_pred             cccEEEeCCCceee
Q 024994          235 TGQIICVDGGVTVT  248 (259)
Q Consensus       235 ~G~~l~~dgG~~~~  248 (259)
                      +|+.|.+|||..++
T Consensus       253 tG~~i~vdGG~~~~  266 (267)
T 1iy8_A          253 NATVVPIDGGQSAA  266 (267)
T ss_dssp             CSCEEEESTTTTTB
T ss_pred             CCCEEEECCCcccC
Confidence            99999999998654

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=2.8e-49  Score=329.48  Aligned_cols=243  Identities=32%  Similarity=0.471  Sum_probs=219.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEee-CChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCS-RNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||++|||++++++|+++|++|++++ |+.+..+....++...+.++.++.+|++|.++++++++++.+.+ +++
T Consensus        26 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g~i  104 (269)
T 3gk3_A           26 RVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADF-GKV  104 (269)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHH-SCC
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc-CCC
Confidence            6899999999999999999999999999998 66666777777776667789999999999999999999999999 799


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      |+||||||+....++.+.+.++|++++++|+.+++.+++.++|.|.+++.++||++||..+..+.++...|++||+++++
T Consensus       105 d~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~  184 (269)
T 3gk3_A          105 DVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIHG  184 (269)
T ss_dssp             SEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHHHHHH
T ss_pred             CEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCCcchHHHHHHHHHH
Confidence            99999999988888889999999999999999999999999999988878999999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      |+++++.|++++||+||+|+||+++|++........    ....+....|.+++.+|+|++++++||+++.+.++||+.|
T Consensus       185 ~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~----~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i  260 (269)
T 3gk3_A          185 FTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDV----LEAKILPQIPVGRLGRPDEVAALIAFLCSDDAGFVTGADL  260 (269)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-----------CCSGGGCTTSSCBCHHHHHHHHHHHTSTTCTTCCSCEE
T ss_pred             HHHHHHHHhhhcCCEEEEEecCcccchhhhhhchhH----HHHHhhhcCCcCCccCHHHHHHHHHHHhCCCcCCeeCcEE
Confidence            999999999999999999999999999987653321    2224566788999999999999999999999999999999


Q ss_pred             EeCCCceee
Q 024994          240 CVDGGVTVT  248 (259)
Q Consensus       240 ~~dgG~~~~  248 (259)
                      ++|||.+++
T Consensus       261 ~vdgG~~~s  269 (269)
T 3gk3_A          261 AINGGMHMS  269 (269)
T ss_dssp             EESTTSCCC
T ss_pred             EECCCEeCc
Confidence            999998764

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=3.3e-49  Score=327.52  Aligned_cols=246  Identities=28%  Similarity=0.357  Sum_probs=212.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhH-HHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE-LDARLHEWKNK-GFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+. +++..+++... +.++.++++|++|.++++++++++.+.+ ++
T Consensus         5 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~   83 (260)
T 1x1t_A            5 KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM-GR   83 (260)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH-SC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc-CC
Confidence            789999999999999999999999999999999887 77777777554 5678899999999999999999999999 79


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      +|+||||||.....++.+.+.++|++++++|+.+++.++++++|+|.+++.++||++||..+..+.++...|++||++++
T Consensus        84 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~  163 (260)
T 1x1t_A           84 IDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVV  163 (260)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCCCchHHHHHHHHH
Confidence            99999999988777888899999999999999999999999999998877799999999999999999999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCC------CchHHHHhh-hhcCCCCCCCCHHHHHHHHHHHhCCCC
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGP------EGSEFLDGI-ARQTPIGRAGEPDEVSSLVAFLCLPAA  231 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~------~~~~~~~~~-~~~~~~~~~~~~~~va~~~~~l~~~~~  231 (259)
                      +|+++++.|++++||+||+|+||+++|++........      ..+...+.+ ....|.+++.+|+|++++++|++++.+
T Consensus       164 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~s~~~  243 (260)
T 1x1t_A          164 GFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLASDAA  243 (260)
T ss_dssp             HHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCCCCCcCHHHHHHHHHHHhChhh
Confidence            9999999999999999999999999999875432110      001122333 455788999999999999999999888


Q ss_pred             CCccccEEEeCCCcee
Q 024994          232 SYITGQIICVDGGVTV  247 (259)
Q Consensus       232 ~~~~G~~l~~dgG~~~  247 (259)
                      .+++|+.+.+|||..+
T Consensus       244 ~~~tG~~~~vdgG~~~  259 (260)
T 1x1t_A          244 AQITGTTVSVDGGWTA  259 (260)
T ss_dssp             TTCCSCEEEESTTGGG
T ss_pred             cCCCCCEEEECCCccC
Confidence            9999999999999764

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=2.6e-49  Score=328.06  Aligned_cols=248  Identities=57%  Similarity=0.886  Sum_probs=221.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++++|++|.++++++++++.+.+++++|
T Consensus        10 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   89 (260)
T 2ae2_A           10 CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLN   89 (260)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCC
Confidence            68999999999999999999999999999999999888888887766778999999999999999999999998845899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.++++++|+|.+++.++||++||..+..+.++...|++||+++++|
T Consensus        90 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  169 (260)
T 2ae2_A           90 ILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQL  169 (260)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCcchHHHHHHHHHHH
Confidence            99999999877788889999999999999999999999999999888789999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC  240 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~  240 (259)
                      +++++.|++++||+||+|+||+++|++.......+........+....|.+++.+|+|++++++|++++.+.+++|+++.
T Consensus       170 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~  249 (260)
T 2ae2_A          170 TRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYVTGQIIY  249 (260)
T ss_dssp             HHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCCCCCEEE
Confidence            99999999999999999999999999864322111101111245566788999999999999999999888999999999


Q ss_pred             eCCCceee
Q 024994          241 VDGGVTVT  248 (259)
Q Consensus       241 ~dgG~~~~  248 (259)
                      +|||..++
T Consensus       250 vdgG~~~~  257 (260)
T 2ae2_A          250 VDGGLMAN  257 (260)
T ss_dssp             ESTTGGGC
T ss_pred             ECCCcccc
Confidence            99998764

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=1.6e-49  Score=328.48  Aligned_cols=241  Identities=30%  Similarity=0.430  Sum_probs=223.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEee-CChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCS-RNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||++|||+++|++|+++|++|++++ |+.+..++..+++...+.++.++++|++|.++++++++++.+.+ +++
T Consensus        14 k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~i   92 (256)
T 3ezl_A           14 RIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEV-GEI   92 (256)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHT-CCE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhc-CCC
Confidence            6899999999999999999999999999988 67777777777777777789999999999999999999999999 799


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      |+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|.+++.++||++||..+..+.++...|++||+++++
T Consensus        93 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~  172 (256)
T 3ezl_A           93 DVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHG  172 (256)
T ss_dssp             EEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSCCHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCCCcccHHHHHHHHH
Confidence            99999999988888889999999999999999999999999999998888999999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      |+++++.|++++||++|+|+||+++|++.....     +...+.+....|.+++.+|+|++++++|++++.+.+++|+.+
T Consensus       173 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i  247 (256)
T 3ezl_A          173 FTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIR-----PDVLEKIVATIPVRRLGSPDEIGSIVAWLASEESGFSTGADF  247 (256)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC-----HHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHHHHhCCEEEEEEECcccCccccccC-----HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCcccCCcCcEE
Confidence            999999999999999999999999999876532     335667778889999999999999999999999999999999


Q ss_pred             EeCCCcee
Q 024994          240 CVDGGVTV  247 (259)
Q Consensus       240 ~~dgG~~~  247 (259)
                      ++|||..+
T Consensus       248 ~vdgG~~~  255 (256)
T 3ezl_A          248 SLNGGLHM  255 (256)
T ss_dssp             EESTTSCC
T ss_pred             EECCCEeC
Confidence            99999876

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=2.3e-49  Score=327.70  Aligned_cols=246  Identities=30%  Similarity=0.419  Sum_probs=220.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++...+.++.++++|++|.++++++++++.+.+ +++|
T Consensus         3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~id   81 (256)
T 1geg_A            3 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTL-GGFD   81 (256)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHT-TCCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh-CCCC
Confidence            789999999999999999999999999999999998888888877666789999999999999999999999999 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.++++++|.|.+++ .++||++||..+..+.++...|++||+++++
T Consensus        82 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~  161 (256)
T 1geg_A           82 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRG  161 (256)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCchhHHHHHHHHHH
Confidence            999999988777888899999999999999999999999999998766 6899999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCc----C--CCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE----E--GPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASY  233 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  233 (259)
                      |+++++.|++++||+||+|+||+++|++.....    .  ........+.+....|.+++.+|+|++++++|++++.+.+
T Consensus       162 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~  241 (256)
T 1geg_A          162 LTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDY  241 (256)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccC
Confidence            999999999999999999999999999854321    0  0001123344556678899999999999999999988899


Q ss_pred             ccccEEEeCCCcee
Q 024994          234 ITGQIICVDGGVTV  247 (259)
Q Consensus       234 ~~G~~l~~dgG~~~  247 (259)
                      ++|+.|.+|||.++
T Consensus       242 ~tG~~i~vdGG~~~  255 (256)
T 1geg_A          242 MTGQSLLIDGGMVF  255 (256)
T ss_dssp             CCSCEEEESSSSSC
T ss_pred             CCCCEEEeCCCccC
Confidence            99999999999764

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=3.4e-49  Score=328.66  Aligned_cols=243  Identities=35%  Similarity=0.549  Sum_probs=219.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHH-HhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEW-KNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++ ...+.++.++++|++|.++++++++++.+.+ +++
T Consensus        22 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g~i  100 (267)
T 1vl8_A           22 RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF-GKL  100 (267)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH-SCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-CCC
Confidence            78999999999999999999999999999999999888877776 3446678899999999999999999999999 789


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCC-ccCCCCCChhhhhhHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVG-GVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~-~~~~~~~~~~Y~~sK~a~~  158 (259)
                      |+||||||+....++.+.+.++|++++++|+.+++.++++++|+|.+++.++||++||.. +..+.++...|++||++++
T Consensus       101 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK~a~~  180 (267)
T 1vl8_A          101 DTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVA  180 (267)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHHHHHHH
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCCCChhHHHHHHHHH
Confidence            999999999877788889999999999999999999999999999887789999999998 8888889999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI  238 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~  238 (259)
                      +|+++++.|++++||+||+|+||+++|++.......   +.....+....|.+++.+|+|++++++|++++.+.+++|+.
T Consensus       181 ~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~---~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~itG~~  257 (267)
T 1vl8_A          181 SLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSD---PEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKYVTGQI  257 (267)
T ss_dssp             HHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTC---HHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHhcccCeEEEEEEeccCccccccccccC---hHHHHHHHhhCCCCCCcCHHHHHHHHHHHcCccccCCcCCe
Confidence            999999999999999999999999999986532211   22344455667889999999999999999998889999999


Q ss_pred             EEeCCCcee
Q 024994          239 ICVDGGVTV  247 (259)
Q Consensus       239 l~~dgG~~~  247 (259)
                      +.+|||+.+
T Consensus       258 i~vdGG~~~  266 (267)
T 1vl8_A          258 IFVDGGWTA  266 (267)
T ss_dssp             EEESTTGGG
T ss_pred             EEECCCCCC
Confidence            999999764

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=2e-49  Score=328.63  Aligned_cols=241  Identities=29%  Similarity=0.381  Sum_probs=204.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEe-eCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTC-SRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||++|||++++++|+++|++|+++ +|+.+..++..+++...+.++.++++|++|.++++++++++.+.+ +++
T Consensus         9 k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~i   87 (259)
T 3edm_A            9 RTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKF-GEI   87 (259)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHH-CSE
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh-CCC
Confidence            789999999999999999999999999998 677777788888887777789999999999999999999999999 799


Q ss_pred             cEEEEcCCCC-CCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCcc-CCCCCChhhhhhHHHH
Q 024994           80 NILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV-RGIPSVSLYGAYKGAM  157 (259)
Q Consensus        80 d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~-~~~~~~~~Y~~sK~a~  157 (259)
                      |+||||||.. ...++.+.+.++|++++++|+.+++.++++++|.|.+  .++||++||..+. .+.++...|++||+++
T Consensus        88 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y~asKaa~  165 (259)
T 3edm_A           88 HGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK--GGAIVTFSSQAGRDGGGPGALAYATSKGAV  165 (259)
T ss_dssp             EEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHCCSTTCHHHHHHHHHH
T ss_pred             CEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCEEEEEcCHHhccCCCCCcHHHHHHHHHH
Confidence            9999999987 5678889999999999999999999999999999966  5899999999888 7888999999999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcccc
Q 024994          158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ  237 (259)
Q Consensus       158 ~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~  237 (259)
                      ++|+++++.|+++. ||||+|+||+++|++.......    ...+.+....|.+|+++|+|++++++||+++.+.++||+
T Consensus       166 ~~l~~~la~e~~~~-I~vn~v~PG~v~T~~~~~~~~~----~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~~~~itG~  240 (259)
T 3edm_A          166 MTFTRGLAKEVGPK-IRVNAVCPGMISTTFHDTFTKP----EVRERVAGATSLKREGSSEDVAGLVAFLASDDAAYVTGA  240 (259)
T ss_dssp             HHHHHHHHHHHTTT-CEEEEEEECCBCC--------------------------CCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHCCC-CEEEEEEECCCcCcccccccCh----HHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCC
Confidence            99999999999887 9999999999999998765331    244556677899999999999999999999999999999


Q ss_pred             EEEeCCCceeee
Q 024994          238 IICVDGGVTVTV  249 (259)
Q Consensus       238 ~l~~dgG~~~~~  249 (259)
                      .|++|||.....
T Consensus       241 ~i~vdGg~~~~~  252 (259)
T 3edm_A          241 CYDINGGVLFSE  252 (259)
T ss_dssp             EEEESBCSSBC-
T ss_pred             EEEECCCcCCCC
Confidence            999999987653

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=4.9e-50  Score=335.02  Aligned_cols=241  Identities=32%  Similarity=0.366  Sum_probs=218.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...+.++.++++|++|.++++++++++.+.  +++|
T Consensus        34 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~--g~iD  111 (275)
T 4imr_A           34 RTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAI--APVD  111 (275)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH--SCCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh--CCCC
Confidence            78999999999999999999999999999999999998888888877888999999999999999999998876  5899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.++++++|+|.+++.++||++||..+..+.++...|++||+++++|
T Consensus       112 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l  191 (275)
T 4imr_A          112 ILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAATKAAQHNL  191 (275)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCchhhHHHHHHHHHH
Confidence            99999999888888899999999999999999999999999999888789999999999999888889999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcC-CCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQT-PIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      +++++.|++++||+||+|+||+++|++.......  .......+.... |.+|+++|+|++++++||+++.++++||+.|
T Consensus       192 ~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~a~~itG~~i  269 (275)
T 4imr_A          192 IQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQ--DPEGWDEYVRTLNWMGRAGRPEEMVGAALFLASEACSFMTGETI  269 (275)
T ss_dssp             HHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHH--CHHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHhcccCcEEEEEEeccccCccccccccc--ChHHHHHHHhhcCccCCCcCHHHHHHHHHHHcCcccCCCCCCEE
Confidence            9999999999999999999999999986543211  112333444444 8999999999999999999999999999999


Q ss_pred             EeCCCc
Q 024994          240 CVDGGV  245 (259)
Q Consensus       240 ~~dgG~  245 (259)
                      .+|||+
T Consensus       270 ~vdGG~  275 (275)
T 4imr_A          270 FLTGGY  275 (275)
T ss_dssp             EESSCC
T ss_pred             EeCCCC
Confidence            999995

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=1.1e-48  Score=333.20  Aligned_cols=246  Identities=29%  Similarity=0.411  Sum_probs=215.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCC------------hhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRN------------QIELDARLHEWKNKGFKVTGSVCDLSSREQREKLI   68 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   68 (259)
                      |++|||||++|||+++|++|+++|++|++++|+            .+.+++..+++...+.++.++++|++|.+++++++
T Consensus        47 k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~  126 (317)
T 3oec_A           47 KVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQAVV  126 (317)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHH
Confidence            689999999999999999999999999999886            66777777777777788999999999999999999


Q ss_pred             HHHHHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccCCCCCC
Q 024994           69 ETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSV  147 (259)
Q Consensus        69 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~~~~~~  147 (259)
                      +++.+.+ +++|+||||||+....++.+.+.++|++++++|+.+++.++++++|.|.+++ .++||++||..+..+.++.
T Consensus       127 ~~~~~~~-g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~  205 (317)
T 3oec_A          127 DEALAEF-GHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQ  205 (317)
T ss_dssp             HHHHHHH-SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCCTTB
T ss_pred             HHHHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCCCCC
Confidence            9999999 7999999999998888889999999999999999999999999999998764 6899999999999999999


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCC---------cCCCCchHHHHh--hhhcCCCCCCCCH
Q 024994          148 SLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF---------EEGPEGSEFLDG--IARQTPIGRAGEP  216 (259)
Q Consensus       148 ~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~---------~~~~~~~~~~~~--~~~~~~~~~~~~~  216 (259)
                      ..|++||+++++|+++++.|++++||+||+|+||+++|++....         ...+......+.  .....| .++.+|
T Consensus       206 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~p  284 (317)
T 3oec_A          206 SHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLP-IPWVEP  284 (317)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHHHHTTTCSSS-SSSBCH
T ss_pred             cchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHHHHHHhhhccCC-CCCCCH
Confidence            99999999999999999999999999999999999999975321         111111111221  122233 788899


Q ss_pred             HHHHHHHHHHhCCCCCCccccEEEeCCCceee
Q 024994          217 DEVSSLVAFLCLPAASYITGQIICVDGGVTVT  248 (259)
Q Consensus       217 ~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~  248 (259)
                      +|++++++||+++.++|+||+.|++|||..+.
T Consensus       285 edvA~av~fL~s~~a~~itG~~i~vdGG~~~~  316 (317)
T 3oec_A          285 EDVSNAVAWLASDEARYIHGAAIPVDGGQLAR  316 (317)
T ss_dssp             HHHHHHHHHHTSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHHHHcCCcccCCCCCEEEECcchhhc
Confidence            99999999999999999999999999998753

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=7.3e-49  Score=325.45  Aligned_cols=244  Identities=30%  Similarity=0.456  Sum_probs=204.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++   +.++.++++|++|.++++++++++.+.+ +++|
T Consensus        10 k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id   85 (261)
T 3n74_A           10 KVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI---GDAALAVAADISKEADVDAAVEAALSKF-GKVD   85 (261)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTSHHHHHHHHHHHHHHH-SCCC
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHhc-CCCC
Confidence            78999999999999999999999999999999999988877765   4579999999999999999999999999 7999


Q ss_pred             EEEEcCCCCC-CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC----CCEEEEecCCCccCCCCCChhhhhhHH
Q 024994           81 ILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG----NGSIVFISSVGGVRGIPSVSLYGAYKG  155 (259)
Q Consensus        81 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~----~~~ii~isS~~~~~~~~~~~~Y~~sK~  155 (259)
                      +||||||... ..++.+.+.++|++++++|+.+++.++++++|+|.+++    .++||++||..+..+.+....|++||+
T Consensus        86 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKa  165 (261)
T 3n74_A           86 ILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKG  165 (261)
T ss_dssp             EEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTCHHHHHHHH
T ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCccHHHHHHH
Confidence            9999999875 56777889999999999999999999999999998653    578999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcc
Q 024994          156 AMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT  235 (259)
Q Consensus       156 a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~  235 (259)
                      ++++|+++++.|++++||+||+|+||+++|++....... ..+...+.+....|.+++.+|+|++++++||+++.+.++|
T Consensus       166 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~it  244 (261)
T 3n74_A          166 WVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGE-DSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLCSPQASMIT  244 (261)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEEC--------------------------CTTSSCCCHHHHHHHHHHHTSGGGTTCC
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhccc-CcHHHHHHHhhcCCcCCCcCHHHHHHHHHHHcCCcccCcC
Confidence            999999999999999999999999999999998765432 2223556677788999999999999999999999999999


Q ss_pred             ccEEEeCCCceeee
Q 024994          236 GQIICVDGGVTVTV  249 (259)
Q Consensus       236 G~~l~~dgG~~~~~  249 (259)
                      |++|++|||.+++.
T Consensus       245 G~~i~vdgG~~~~~  258 (261)
T 3n74_A          245 GVALDVDGGRSIGG  258 (261)
T ss_dssp             SCEEEESTTTTC--
T ss_pred             CcEEEecCCcccCC
Confidence            99999999998753

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=7.6e-50  Score=332.59  Aligned_cols=244  Identities=28%  Similarity=0.334  Sum_probs=213.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+.+++..+++...  +..+.++.+|+++.+++++++++    + ++
T Consensus        11 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~----~-g~   85 (267)
T 3t4x_A           11 KTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEK----Y-PK   85 (267)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHH----C-CC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHh----c-CC
Confidence            68999999999999999999999999999999999998888888754  45688899999999998877653    5 78


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      +|+||||||.....++.+.+.++|++++++|+.+++.++++++|+|.+++.++||++||..+..+.++...|++||++++
T Consensus        86 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~  165 (267)
T 3t4x_A           86 VDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYSATKTMQL  165 (267)
T ss_dssp             CSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCcchHHHHHHHHHH
Confidence            99999999998888888999999999999999999999999999999888899999999999999999999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCc------CCCCchHHHH----hhhhcCCCCCCCCHHHHHHHHHHHhC
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE------EGPEGSEFLD----GIARQTPIGRAGEPDEVSSLVAFLCL  228 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~------~~~~~~~~~~----~~~~~~~~~~~~~~~~va~~~~~l~~  228 (259)
                      +|+++++.|++++|||||+|+||+++|++.....      .....+...+    ......|.+|+++|+|++++++||++
T Consensus       166 ~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~fL~s  245 (267)
T 3t4x_A          166 SLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEIAHLVTFLSS  245 (267)
T ss_dssp             HHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBCTHHHHHHHHHHHS
T ss_pred             HHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccCHHHHHHHHHHHcC
Confidence            9999999999999999999999999999754221      1111111222    22234578999999999999999999


Q ss_pred             CCCCCccccEEEeCCCceeee
Q 024994          229 PAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       229 ~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      +.++++||+.|.+|||...++
T Consensus       246 ~~~~~itG~~i~vdGG~~~si  266 (267)
T 3t4x_A          246 PLSSAINGSALRIDGGLVRSV  266 (267)
T ss_dssp             GGGTTCCSCEEEESTTCSCSC
T ss_pred             ccccCccCCeEEECCCccccc
Confidence            999999999999999987653

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=1.3e-48  Score=324.77  Aligned_cols=241  Identities=31%  Similarity=0.407  Sum_probs=212.1

Q ss_pred             CEEEEEcCc-chHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGT-RGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s-~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||+ +|||++++++|+++|++|++++|+.+++++..+++.+. +.++.++++|++|.++++++++++.+.+ ++
T Consensus        23 k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g~  101 (266)
T 3o38_A           23 KVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKA-GR  101 (266)
T ss_dssp             CEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHH-SC
T ss_pred             CEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHh-CC
Confidence            789999998 59999999999999999999999999999888888655 3589999999999999999999999999 79


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC-CCCEEEEecCCCccCCCCCChhhhhhHHHH
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVGGVRGIPSVSLYGAYKGAM  157 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~  157 (259)
                      +|+||||||+....++.+.+.++|++++++|+.+++.++++++|+|.++ +.++||++||..+..+.++...|++||+++
T Consensus       102 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~  181 (266)
T 3o38_A          102 LDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGV  181 (266)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTTCHHHHHHHHHH
T ss_pred             CcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCCCchHHHHHHHH
Confidence            9999999999888888899999999999999999999999999999876 678999999999999999999999999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcccc
Q 024994          158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ  237 (259)
Q Consensus       158 ~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~  237 (259)
                      ++|+++++.|++++||+||+|+||+++|++.......    ...+.+....|.+++.+|+|++++++|++++.+.++||+
T Consensus       182 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~----~~~~~~~~~~~~~r~~~~~dva~~i~~l~s~~~~~~tG~  257 (266)
T 3o38_A          182 MALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSS----ELLDRLASDEAFGRAAEPWEVAATIAFLASDYSSYMTGE  257 (266)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECCCCC---------------------CCTTSSCCCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcH----HHHHHHHhcCCcCCCCCHHHHHHHHHHHcCccccCccCC
Confidence            9999999999999999999999999999998654332    245566677899999999999999999999988999999


Q ss_pred             EEEeCCCce
Q 024994          238 IICVDGGVT  246 (259)
Q Consensus       238 ~l~~dgG~~  246 (259)
                      +|++|||++
T Consensus       258 ~i~vdgG~~  266 (266)
T 3o38_A          258 VVSVSSQRA  266 (266)
T ss_dssp             EEEESSCCC
T ss_pred             EEEEcCCcC
Confidence            999999974

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=7.5e-49  Score=327.26  Aligned_cols=241  Identities=33%  Similarity=0.433  Sum_probs=215.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeC-ChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSR-NQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||++|||+++|++|+++|++|++++| +.+..+...+++...+.++.++++|++|.++++++++++.+.+ +++
T Consensus        30 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~i  108 (271)
T 4iin_A           30 KNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSD-GGL  108 (271)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-SSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhc-CCC
Confidence            68999999999999999999999999999999 5556666677777777789999999999999999999999999 799


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      |+||||||+....++.+.+.++|++++++|+.+++.+++.++|+|.+++.++||++||..+..+.++...|++||+++++
T Consensus       109 d~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~  188 (271)
T 4iin_A          109 SYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYSASKGGMIA  188 (271)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHH
T ss_pred             CEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCCchHhHHHHHHHHH
Confidence            99999999988888888999999999999999999999999999998878999999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      |+++++.|++++||+||+|+||+++|++.......     ....+....|.+++.+|+|++++++|++++.+.+++|+.|
T Consensus       189 ~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~-----~~~~~~~~~~~~~~~~p~dvA~~i~~l~s~~~~~itG~~i  263 (271)
T 4iin_A          189 MSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDE-----LKADYVKNIPLNRLGSAKEVAEAVAFLLSDHSSYITGETL  263 (271)
T ss_dssp             HHHHHHHHHHTTTEEEEEEEECSBCCC-----------------CGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHH-----HHHHHHhcCCcCCCcCHHHHHHHHHHHhCCCcCCCcCCEE
Confidence            99999999999999999999999999998765322     3455667789999999999999999999999999999999


Q ss_pred             EeCCCcee
Q 024994          240 CVDGGVTV  247 (259)
Q Consensus       240 ~~dgG~~~  247 (259)
                      ++|||..|
T Consensus       264 ~vdGG~~~  271 (271)
T 4iin_A          264 KVNGGLYM  271 (271)
T ss_dssp             EESTTSCC
T ss_pred             EeCCCeeC
Confidence            99999864

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.9e-49  Score=326.51  Aligned_cols=237  Identities=25%  Similarity=0.347  Sum_probs=197.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+..++..+++   +.++.++++|++|.++++++++++.+.+ +++|
T Consensus         8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~id   83 (257)
T 3tpc_A            8 RVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL---GAAVRFRNADVTNEADATAALAFAKQEF-GHVH   83 (257)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC---------------CEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence            68999999999999999999999999999999998887776655   4478899999999999999999999999 7999


Q ss_pred             EEEEcCCCCCCCCC----CCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC------CCCEEEEecCCCccCCCCCChhh
Q 024994           81 ILINNAAIAFVKPT----VDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS------GNGSIVFISSVGGVRGIPSVSLY  150 (259)
Q Consensus        81 ~vi~~ag~~~~~~~----~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~~~~ii~isS~~~~~~~~~~~~Y  150 (259)
                      +||||||.....++    .+.+.++|++++++|+.+++.++++++|+|.++      +.++||++||..+..+.++...|
T Consensus        84 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  163 (257)
T 3tpc_A           84 GLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQAAY  163 (257)
T ss_dssp             EEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCHHH
T ss_pred             EEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCCCCcch
Confidence            99999998765543    367899999999999999999999999999874      57899999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCC-CCCCCHHHHHHHHHHHhCC
Q 024994          151 GAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPI-GRAGEPDEVSSLVAFLCLP  229 (259)
Q Consensus       151 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~~~  229 (259)
                      ++||+++++|+++++.|++++||+||+|+||+++|++.......     ..+.+....|. +|+++|+|++++++||+++
T Consensus       164 ~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~-----~~~~~~~~~p~~~r~~~~~dva~~v~~l~s~  238 (257)
T 3tpc_A          164 AASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQD-----VQDALAASVPFPPRLGRAEEYAALVKHICEN  238 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC-------------------CCSSSSCSCBCHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCHH-----HHHHHHhcCCCCCCCCCHHHHHHHHHHHccc
Confidence            99999999999999999999999999999999999998654322     34455667787 8999999999999999975


Q ss_pred             CCCCccccEEEeCCCceee
Q 024994          230 AASYITGQIICVDGGVTVT  248 (259)
Q Consensus       230 ~~~~~~G~~l~~dgG~~~~  248 (259)
                        .++||+.|.+|||.+++
T Consensus       239 --~~itG~~i~vdGG~~~~  255 (257)
T 3tpc_A          239 --TMLNGEVIRLDGALRMA  255 (257)
T ss_dssp             --TTCCSCEEEESTTCCC-
T ss_pred             --CCcCCcEEEECCCccCC
Confidence              79999999999998764

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=4.3e-49  Score=332.67  Aligned_cols=242  Identities=20%  Similarity=0.242  Sum_probs=216.4

Q ss_pred             CEEEEEcCcc--hHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTR--GIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~--giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||+|  |||+++|++|+++|++|++++|+.+..+...+.....+ .+.++++|++|.++++++++++.+++ ++
T Consensus        31 k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~  108 (296)
T 3k31_A           31 KKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLG-VKLTVPCDVSDAESVDNMFKVLAEEW-GS  108 (296)
T ss_dssp             CEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHT-CCEEEECCTTCHHHHHHHHHHHHHHH-SC
T ss_pred             CEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcC-CeEEEEcCCCCHHHHHHHHHHHHHHc-CC
Confidence            7899999997  99999999999999999999999866555444333333 46889999999999999999999999 79


Q ss_pred             ccEEEEcCCCCCC----CCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhH
Q 024994           79 LNILINNAAIAFV----KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYK  154 (259)
Q Consensus        79 id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  154 (259)
                      +|+||||||+...    .++.+.+.++|++++++|+.+++.++++++|+|.+  .++||++||..+..+.+++..|++||
T Consensus       109 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~IV~isS~~~~~~~~~~~~Y~asK  186 (296)
T 3k31_A          109 LDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN--GGSILTLSYYGAEKVVPHYNVMGVCK  186 (296)
T ss_dssp             CSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGTSCCTTTTHHHHHH
T ss_pred             CCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCEEEEEEehhhccCCCCchhhHHHH
Confidence            9999999998764    67888999999999999999999999999999965  68999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 024994          155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYI  234 (259)
Q Consensus       155 ~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~  234 (259)
                      +++++|+++++.|++++|||||+|+||+++|++......   .....+......|.+|+.+|+|++++++||+++.+.++
T Consensus       187 aal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~a~~i  263 (296)
T 3k31_A          187 AALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISD---FHYILTWNKYNSPLRRNTTLDDVGGAALYLLSDLGRGT  263 (296)
T ss_dssp             HHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHH---HHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccc---hHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCccCCc
Confidence            999999999999999999999999999999998765422   12345667778899999999999999999999999999


Q ss_pred             cccEEEeCCCceeee
Q 024994          235 TGQIICVDGGVTVTV  249 (259)
Q Consensus       235 ~G~~l~~dgG~~~~~  249 (259)
                      ||++|.+|||+++..
T Consensus       264 tG~~i~vdGG~~~~~  278 (296)
T 3k31_A          264 TGETVHVDCGYHVVG  278 (296)
T ss_dssp             CSCEEEESTTGGGCS
T ss_pred             cCCEEEECCCccccC
Confidence            999999999998764

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=1.4e-48  Score=324.19  Aligned_cols=247  Identities=30%  Similarity=0.429  Sum_probs=219.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++... +.++.++++|++|.++++++++++.+.+ +++
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~i   86 (263)
T 3ai3_A            8 KVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSF-GGA   86 (263)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHH-SSC
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc-CCC
Confidence            68999999999999999999999999999999999888877777654 5678999999999999999999999999 789


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      |+||||||.....++.+.+.++|++++++|+.+++.++++++|.|.+++.++||++||..+..+.++...|++||+++++
T Consensus        87 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~  166 (263)
T 3ai3_A           87 DILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMM  166 (263)
T ss_dssp             SEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCcchHHHHHHHHHH
Confidence            99999999987778889999999999999999999999999999987778999999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcC------CCCchHHHHhhhhc-CCCCCCCCHHHHHHHHHHHhCCCCC
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE------GPEGSEFLDGIARQ-TPIGRAGEPDEVSSLVAFLCLPAAS  232 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~------~~~~~~~~~~~~~~-~~~~~~~~~~~va~~~~~l~~~~~~  232 (259)
                      |+++++.|++++||+||+|+||+++|++......      ....+.....+... .|.+++.+|+|++++++|++++.+.
T Consensus       167 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~  246 (263)
T 3ai3_A          167 FSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFVFLCSERAT  246 (263)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTTCSCBCHHHHHHHHHHHTSTTCT
T ss_pred             HHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCcccc
Confidence            9999999999999999999999999997543210      00112233444445 7889999999999999999998889


Q ss_pred             CccccEEEeCCCceee
Q 024994          233 YITGQIICVDGGVTVT  248 (259)
Q Consensus       233 ~~~G~~l~~dgG~~~~  248 (259)
                      +++|+.+++|||..++
T Consensus       247 ~~~G~~~~vdgG~~~s  262 (263)
T 3ai3_A          247 YSVGSAYFVDGGMLKT  262 (263)
T ss_dssp             TCCSCEEEESTTCCCC
T ss_pred             CCCCcEEEECCCcccc
Confidence            9999999999998765

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=2.2e-48  Score=327.56  Aligned_cols=239  Identities=26%  Similarity=0.332  Sum_probs=217.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEee-CChhHHHHHHHHHH-hcCCcEEEEEecCCCHH----------------
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCS-RNQIELDARLHEWK-NKGFKVTGSVCDLSSRE----------------   62 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~-r~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~----------------   62 (259)
                      |++|||||++|||++++++|+++|++|++++ |+.+.+++..+++. ..+.++.++++|++|.+                
T Consensus        10 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   89 (291)
T 1e7w_A           10 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF   89 (291)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccccccchH
Confidence            6899999999999999999999999999999 99998888888776 44668999999999999                


Q ss_pred             -HHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCCCC--------------HHHHHHHHHHhhHhHHHHHHHHHHHhHhC
Q 024994           63 -QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDIT--------------AEDMSTVSSTNFESVFHLSQLAHPLFKAS  127 (259)
Q Consensus        63 -~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~  127 (259)
                       +++++++++.+.+ +++|+||||||+....++.+.+              .++|++++++|+.+++.++++++|+|.++
T Consensus        90 ~~v~~~~~~~~~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~  168 (291)
T 1e7w_A           90 TRCAELVAACYTHW-GRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT  168 (291)
T ss_dssp             HHHHHHHHHHHHHH-SCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHhc-CCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence             9999999999999 7999999999988777888888              99999999999999999999999999887


Q ss_pred             C------CCEEEEecCCCccCCCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHH
Q 024994          128 G------NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFL  201 (259)
Q Consensus       128 ~------~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~  201 (259)
                      +      .++||++||..+..+.++...|++||+++++|+++++.|++++||+||+|+||+++|++ . . .    +...
T Consensus       169 ~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~-~-~----~~~~  241 (291)
T 1e7w_A          169 PAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D-M-P----PAVW  241 (291)
T ss_dssp             CGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G-S-C----HHHH
T ss_pred             CCCCCCCCcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c-C-C----HHHH
Confidence            6      69999999999999999999999999999999999999999999999999999999998 4 2 1    2244


Q ss_pred             HhhhhcCCCC-CCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCcee
Q 024994          202 DGIARQTPIG-RAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTV  247 (259)
Q Consensus       202 ~~~~~~~~~~-~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~  247 (259)
                      +.+....|.+ ++.+|+|++++++||+++.+.++||+++.+|||..+
T Consensus       242 ~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~  288 (291)
T 1e7w_A          242 EGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL  288 (291)
T ss_dssp             HHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCccc
Confidence            5556677888 999999999999999998889999999999999865

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=9.5e-49  Score=330.05  Aligned_cols=244  Identities=19%  Similarity=0.239  Sum_probs=211.9

Q ss_pred             CEEEEEcCcc--hHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTR--GIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~--giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||+|  |||+++|++|+++|++|++++|+.+..+.. +++.....++.++++|++|.++++++++++.+.+ ++
T Consensus        32 k~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~  109 (293)
T 3grk_A           32 KRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRV-EPLAEELGAFVAGHCDVADAASIDAVFETLEKKW-GK  109 (293)
T ss_dssp             CEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHH-HHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHT-SC
T ss_pred             CEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-HHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhc-CC
Confidence            7899999994  599999999999999999999996544333 3333333468899999999999999999999999 79


Q ss_pred             ccEEEEcCCCCC----CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhH
Q 024994           79 LNILINNAAIAF----VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYK  154 (259)
Q Consensus        79 id~vi~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  154 (259)
                      +|+||||||+..    ..++.+.+.++|++++++|+.+++.++++++|+|.+  .++||++||..+..+.+++..|++||
T Consensus       110 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~Y~asK  187 (293)
T 3grk_A          110 LDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD--GGSILTLTYYGAEKVMPNYNVMGVAK  187 (293)
T ss_dssp             CSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT--CEEEEEEECGGGTSBCTTTTHHHHHH
T ss_pred             CCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC--CCEEEEEeehhhccCCCchHHHHHHH
Confidence            999999999876    467888999999999999999999999999999975  68999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 024994          155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYI  234 (259)
Q Consensus       155 ~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~  234 (259)
                      +++++|+++++.|++++||+||+|+||+++|++......   .....+.+....|.+|+.+|+|++++++||+++.+.++
T Consensus       188 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~i  264 (293)
T 3grk_A          188 AALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGD---FRYILKWNEYNAPLRRTVTIDEVGDVGLYFLSDLSRSV  264 (293)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CC---HHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccc---hHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCC
Confidence            999999999999999999999999999999998765422   23356677788999999999999999999999999999


Q ss_pred             cccEEEeCCCceeeecc
Q 024994          235 TGQIICVDGGVTVTVNV  251 (259)
Q Consensus       235 ~G~~l~~dgG~~~~~~~  251 (259)
                      ||++|.+|||+++....
T Consensus       265 tG~~i~vdGG~~~~~~~  281 (293)
T 3grk_A          265 TGEVHHADSGYHVIGMK  281 (293)
T ss_dssp             CSCEEEESTTGGGBCC-
T ss_pred             cceEEEECCCcccCCCC
Confidence            99999999999886543

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=2.3e-49  Score=333.99  Aligned_cols=242  Identities=29%  Similarity=0.341  Sum_probs=215.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCCh--hHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ--IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||++|||++++++|+++|++|++++|+.  +..+...+.+...+.++.++++|++|.++++++++++.+.+ ++
T Consensus        50 k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~  128 (294)
T 3r3s_A           50 RKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREAL-GG  128 (294)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHH-TC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHc-CC
Confidence            7899999999999999999999999999999873  45556666666667789999999999999999999999999 79


Q ss_pred             ccEEEEcCCCCC-CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHH
Q 024994           79 LNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAM  157 (259)
Q Consensus        79 id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~  157 (259)
                      +|+||||||... ..++.+.+.++|++++++|+.+++.++++++|+|.+  .++||++||..+..+.++...|++||+++
T Consensus       129 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~Y~asKaa~  206 (294)
T 3r3s_A          129 LDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK--GASIITTSSIQAYQPSPHLLDYAATKAAI  206 (294)
T ss_dssp             CCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT--TCEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             CCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--CCEEEEECChhhccCCCCchHHHHHHHHH
Confidence            999999999865 467888999999999999999999999999999854  48999999999999999999999999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcccc
Q 024994          158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ  237 (259)
Q Consensus       158 ~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~  237 (259)
                      ++|+++++.|++++||+||+|+||+++|++.......   ......+....|.+|+++|+|++++++||+++.++++||+
T Consensus       207 ~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~---~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~  283 (294)
T 3r3s_A          207 LNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQT---QDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAE  283 (294)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSC---GGGSTTTTTTSTTSSCBCGGGGHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCC---HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCC
Confidence            9999999999999999999999999999984322111   1234556677899999999999999999999999999999


Q ss_pred             EEEeCCCceee
Q 024994          238 IICVDGGVTVT  248 (259)
Q Consensus       238 ~l~~dgG~~~~  248 (259)
                      +|++|||.+++
T Consensus       284 ~i~vdGG~~l~  294 (294)
T 3r3s_A          284 VHGVCGGEHLG  294 (294)
T ss_dssp             EEEESTTCCCC
T ss_pred             EEEECCCccCc
Confidence            99999998763

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=6.5e-49  Score=326.08  Aligned_cols=243  Identities=29%  Similarity=0.438  Sum_probs=218.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++++|++|.++++++++++.+.+ +++|
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id   86 (262)
T 1zem_A            8 KVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF-GKID   86 (262)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh-CCCC
Confidence            689999999999999999999999999999999999888888887666789999999999999999999999999 7999


Q ss_pred             EEEEcCCCC-CCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      +||||||.. ...++.+.+.++|++++++|+.+++.++++++|+|.+++.++||++||..+..+.++...|++||+++++
T Consensus        87 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~  166 (262)
T 1zem_A           87 FLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIA  166 (262)
T ss_dssp             EEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCCchHHHHHHHHHH
Confidence            999999987 6678888999999999999999999999999999988778999999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCc---------C-CCCchH-HHHhhhhcCCCCCCCCHHHHHHHHHHHhC
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE---------E-GPEGSE-FLDGIARQTPIGRAGEPDEVSSLVAFLCL  228 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~---------~-~~~~~~-~~~~~~~~~~~~~~~~~~~va~~~~~l~~  228 (259)
                      |+++++.|++++||+||+|+||+++|++.....         . ....+. ..+.+....|.+|+++|+|++++++||++
T Consensus       167 ~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s  246 (262)
T 1zem_A          167 LTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAFLLG  246 (262)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHHHHHHS
T ss_pred             HHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC
Confidence            999999999999999999999999999864310         0 010122 33445567899999999999999999999


Q ss_pred             CCCCCccccEEEeCCC
Q 024994          229 PAASYITGQIICVDGG  244 (259)
Q Consensus       229 ~~~~~~~G~~l~~dgG  244 (259)
                      +.+.++||+.|.+|||
T Consensus       247 ~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          247 DDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             GGGTTCCSCEEEESCC
T ss_pred             chhcCcCCcEEecCCC
Confidence            9899999999999998

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=7.7e-50  Score=331.65  Aligned_cols=241  Identities=22%  Similarity=0.275  Sum_probs=206.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCC---hhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRN---QIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG   77 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (259)
                      |++|||||++|||+++|++|+++|++|++++|.   .+.+++..+++...+.++.++++|++|.++++++++++.+.+ +
T Consensus        12 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g   90 (262)
T 3ksu_A           12 KVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEF-G   90 (262)
T ss_dssp             CEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHH-C
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-C
Confidence            789999999999999999999999999998764   456777777787777889999999999999999999999999 7


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHH
Q 024994           78 KLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAM  157 (259)
Q Consensus        78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~  157 (259)
                      ++|+||||||+....++.+.+.++|++++++|+.+++.++++++|+|.  +.++||++||..+..+.++...|++||+++
T Consensus        91 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~--~~g~iv~isS~~~~~~~~~~~~Y~asKaa~  168 (262)
T 3ksu_A           91 KVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMN--PNGHIITIATSLLAAYTGFYSTYAGNKAPV  168 (262)
T ss_dssp             SEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEE--EEEEEEEECCCHHHHHHCCCCC-----CHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhc--CCCEEEEEechhhccCCCCCchhHHHHHHH
Confidence            999999999998888888999999999999999999999999999993  358999999999998889999999999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcccc
Q 024994          158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ  237 (259)
Q Consensus       158 ~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~  237 (259)
                      ++|+++++.|++++||+||+|+||+++|++........    ....+....|.+++.+|+|++++++||+++ +.++||+
T Consensus       169 ~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~----~~~~~~~~~~~~r~~~pedvA~~v~~L~s~-~~~itG~  243 (262)
T 3ksu_A          169 EHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETKE----STAFHKSQAMGNQLTKIEDIAPIIKFLTTD-GWWINGQ  243 (262)
T ss_dssp             HHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC----------------CCCCSCCGGGTHHHHHHHHTT-TTTCCSC
T ss_pred             HHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCchH----HHHHHHhcCcccCCCCHHHHHHHHHHHcCC-CCCccCC
Confidence            99999999999999999999999999999875432221    344556678899999999999999999998 8999999


Q ss_pred             EEEeCCCceeee
Q 024994          238 IICVDGGVTVTV  249 (259)
Q Consensus       238 ~l~~dgG~~~~~  249 (259)
                      .|.+|||.....
T Consensus       244 ~i~vdGg~~~~~  255 (262)
T 3ksu_A          244 TIFANGGYTTRE  255 (262)
T ss_dssp             EEEESTTCCCC-
T ss_pred             EEEECCCccCCC
Confidence            999999987643

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=2.6e-48  Score=320.14  Aligned_cols=239  Identities=31%  Similarity=0.399  Sum_probs=204.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCCh-hHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ-IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||++|||++++++|+++|++|++++|+. +++++   ++...+.++.++++|++|.++++++++++.+.+ +++
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~i   83 (249)
T 2ew8_A            8 KLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTF-GRC   83 (249)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-SCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHc-CCC
Confidence            6899999999999999999999999999999998 66654   333445678999999999999999999999999 799


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      |+||||||.....++.+.+.++|++++++|+.+++.++++++|.|.+++.++||++||..+..+.++...|++||+++++
T Consensus        84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~  163 (249)
T 2ew8_A           84 DILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIG  163 (249)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCchhHHHHHHHHHH
Confidence            99999999887778888999999999999999999999999999988778999999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCC-CCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIK-PFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI  238 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~  238 (259)
                      |+++++.|++++||+||+|+||+++|++.. ......  ....+.+.  .|.+++.+|+|++++++|++++.+++++|+.
T Consensus       164 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~--~~~~~~~~--~~~~~~~~p~dva~~~~~l~s~~~~~~tG~~  239 (249)
T 2ew8_A          164 FTRALASDLGKDGITVNAIAPSLVRTATTEASALSAM--FDVLPNML--QAIPRLQVPLDLTGAAAFLASDDASFITGQT  239 (249)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECCC--------------------CTT--SSSCSCCCTHHHHHHHHHHTSGGGTTCCSCE
T ss_pred             HHHHHHHHHHhcCcEEEEEecCcCcCccchhccccch--hhHHHHhh--CccCCCCCHHHHHHHHHHHcCcccCCCCCcE
Confidence            999999999999999999999999999875 322110  01122222  6788999999999999999998889999999


Q ss_pred             EEeCCCcee
Q 024994          239 ICVDGGVTV  247 (259)
Q Consensus       239 l~~dgG~~~  247 (259)
                      +.+|||.+.
T Consensus       240 ~~vdGG~~~  248 (249)
T 2ew8_A          240 LAVDGGMVR  248 (249)
T ss_dssp             EEESSSCCC
T ss_pred             EEECCCccC
Confidence            999999753

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=1.4e-48  Score=323.67  Aligned_cols=244  Identities=34%  Similarity=0.527  Sum_probs=219.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++...+.++.++.+|++|.++++++++++.+.+ +++|
T Consensus        15 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~iD   93 (260)
T 2zat_A           15 KVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLH-GGVD   93 (260)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence            689999999999999999999999999999999998888888877667788999999999999999999999999 7999


Q ss_pred             EEEEcCCCCC-CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      +||||||... ..++.+.+.++|++++++|+.+++.++++++|+|.+++.++||++||..+..+.++...|++||+++++
T Consensus        94 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~  173 (260)
T 2zat_A           94 ILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLG  173 (260)
T ss_dssp             EEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCCchhHHHHHHHHHH
Confidence            9999999864 467788899999999999999999999999999988878999999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      |+++++.|++++||+||+|+||+++|++.......   ......+....|.+++.+|+|++++++|++++.+.+++|+++
T Consensus       174 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~~  250 (260)
T 2zat_A          174 LTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMD---KARKEYMKESLRIRRLGNPEDCAGIVSFLCSEDASYITGETV  250 (260)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSS---HHHHHHHHHHHTCSSCBCGGGGHHHHHHHTSGGGTTCCSCEE
T ss_pred             HHHHHHHHhcccCeEEEEEEECcccCccchhcccC---hHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCCccCCEE
Confidence            99999999999999999999999999986432111   112333445668889999999999999999988899999999


Q ss_pred             EeCCCceee
Q 024994          240 CVDGGVTVT  248 (259)
Q Consensus       240 ~~dgG~~~~  248 (259)
                      ++|||...+
T Consensus       251 ~vdgG~~~s  259 (260)
T 2zat_A          251 VVGGGTASR  259 (260)
T ss_dssp             EESTTCCCC
T ss_pred             EECCCcccc
Confidence            999998765

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.3e-48  Score=320.47  Aligned_cols=241  Identities=24%  Similarity=0.309  Sum_probs=213.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCC--CEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFG--AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||++|||++++++|+++|  ++|++++|+.+.++++.+++   +.++.++++|++|.++++++++++.+.+ ++
T Consensus         3 k~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~   78 (254)
T 3kzv_A            3 KVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY---GDRFFYVVGDITEDSVLKQLVNAAVKGH-GK   78 (254)
T ss_dssp             CEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH---GGGEEEEESCTTSHHHHHHHHHHHHHHH-SC
T ss_pred             CEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh---CCceEEEECCCCCHHHHHHHHHHHHHhc-CC
Confidence            789999999999999999999985  78999999999888777665   4589999999999999999999999999 79


Q ss_pred             ccEEEEcCCCCC-CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHH
Q 024994           79 LNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAM  157 (259)
Q Consensus        79 id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~  157 (259)
                      +|+||||||... ..++.+.+.++|++++++|+.+++.++++++|+|.+++ ++||++||..+..+.+++..|++||+++
T Consensus        79 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a~  157 (254)
T 3kzv_A           79 IDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYFSSWGAYGSSKAAL  157 (254)
T ss_dssp             CCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCSSCCSHHHHHHHHHH
T ss_pred             ccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccCCCCcchHHHHHHHH
Confidence            999999999864 47888999999999999999999999999999998765 9999999999999999999999999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCC----CchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCC-CC
Q 024994          158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGP----EGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPA-AS  232 (259)
Q Consensus       158 ~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~-~~  232 (259)
                      ++|+++++.|+  .|||||+|+||+++|++........    ..+...+.+....|.+|+.+|+|++++++||+++. +.
T Consensus       158 ~~~~~~la~e~--~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~~L~s~~~~~  235 (254)
T 3kzv_A          158 NHFAMTLANEE--RQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYAKLALHGIPD  235 (254)
T ss_dssp             HHHHHHHHHHC--TTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTTC----CHHHHHHHHHHHHHCCCG
T ss_pred             HHHHHHHHhhc--cCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhcCCcCCcccHHHHHHHHHhhcccC
Confidence            99999999998  5899999999999999987654322    13445667778889999999999999999999988 49


Q ss_pred             CccccEEEeCCCceee
Q 024994          233 YITGQIICVDGGVTVT  248 (259)
Q Consensus       233 ~~~G~~l~~dgG~~~~  248 (259)
                      ++||++|.+|||....
T Consensus       236 ~itG~~i~vdg~~~~~  251 (254)
T 3kzv_A          236 GVNGQYLSYNDPALAD  251 (254)
T ss_dssp             GGTTCEEETTCGGGGG
T ss_pred             CCCccEEEecCccccc
Confidence            9999999999998654

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=8.5e-49  Score=328.03  Aligned_cols=241  Identities=29%  Similarity=0.366  Sum_probs=207.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCC------------hhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRN------------QIELDARLHEWKNKGFKVTGSVCDLSSREQREKLI   68 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   68 (259)
                      |++|||||++|||++++++|+++|++|++++|+            .+.+++..+++...+.++.++++|++|.+++++++
T Consensus        14 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   93 (278)
T 3sx2_A           14 KVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSAAL   93 (278)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence            789999999999999999999999999999987            67777777777766778999999999999999999


Q ss_pred             HHHHHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccCCC---
Q 024994           69 ETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGI---  144 (259)
Q Consensus        69 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~~~---  144 (259)
                      +++.+.+ +++|+||||||+....+    +.++|++++++|+.+++.++++++|+|.+++ .++||++||..+..+.   
T Consensus        94 ~~~~~~~-g~id~lv~nAg~~~~~~----~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  168 (278)
T 3sx2_A           94 QAGLDEL-GRLDIVVANAGIAPMSA----GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSA  168 (278)
T ss_dssp             HHHHHHH-CCCCEEEECCCCCCCSS----THHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCCS
T ss_pred             HHHHHHc-CCCCEEEECCCCCCCCC----CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCccC
Confidence            9999999 79999999999865433    5899999999999999999999999998764 6899999999998876   


Q ss_pred             -CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchH------HHHhhhhcCCCCCCCCHH
Q 024994          145 -PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSE------FLDGIARQTPIGRAGEPD  217 (259)
Q Consensus       145 -~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~  217 (259)
                       ++...|++||+++++|+++++.|++++||+||+|+||+++|++............      ....+....| +++.+|+
T Consensus       169 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~p~  247 (278)
T 3sx2_A          169 DPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMP-VEVLAPE  247 (278)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSSS-CSSBCHH
T ss_pred             CCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhhcC-cCcCCHH
Confidence             6778999999999999999999999999999999999999998754211000000      0011223345 7888999


Q ss_pred             HHHHHHHHHhCCCCCCccccEEEeCCCcee
Q 024994          218 EVSSLVAFLCLPAASYITGQIICVDGGVTV  247 (259)
Q Consensus       218 ~va~~~~~l~~~~~~~~~G~~l~~dgG~~~  247 (259)
                      |++++++||+++.++++||+.|++|||..+
T Consensus       248 dvA~~v~~l~s~~~~~itG~~i~vdGG~~~  277 (278)
T 3sx2_A          248 DVANAVAWLVSDQARYITGVTLPVDAGFLN  277 (278)
T ss_dssp             HHHHHHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred             HHHHHHHHHhCcccccccCCEEeECCCccc
Confidence            999999999999999999999999999865

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=6.9e-48  Score=316.91  Aligned_cols=235  Identities=30%  Similarity=0.387  Sum_probs=212.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++     .+.++++|++|.++++++++++.+.+ +++|
T Consensus         6 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id   79 (245)
T 1uls_A            6 KAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-----GAHPVVMDVADPASVERGFAEALAHL-GRLD   79 (245)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----TCEEEECCTTCHHHHHHHHHHHHHHH-SSCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCEEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence            68999999999999999999999999999999988877655433     27788999999999999999999999 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.++++++|+|.+++.++||++||.. ..+.++...|++||+++++|
T Consensus        80 ~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~~~~~Y~asK~a~~~~  158 (245)
T 1uls_A           80 GVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLGQANYAASMAGVVGL  158 (245)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTTCHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCCCchhHHHHHHHHHHH
Confidence            99999999877788889999999999999999999999999999887789999999998 88888999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC  240 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~  240 (259)
                      +++++.|+.++||+||+|+||+++|++.....     +...+.+....|.+++.+|+|++++++|++++.+.+++|+.+.
T Consensus       159 ~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-----~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~  233 (245)
T 1uls_A          159 TRTLALELGRWGIRVNTLAPGFIETRMTAKVP-----EKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFITGQVLF  233 (245)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBCCTTTSSSC-----HHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHHhHhCeEEEEEEeCcCcCcchhhcC-----HHHHHHHHhhCCCCCCcCHHHHHHHHHHHhCchhcCCcCCEEE
Confidence            99999999999999999999999999875431     2234455566788999999999999999999888999999999


Q ss_pred             eCCCcee
Q 024994          241 VDGGVTV  247 (259)
Q Consensus       241 ~dgG~~~  247 (259)
                      +|||..+
T Consensus       234 vdgG~~~  240 (245)
T 1uls_A          234 VDGGRTI  240 (245)
T ss_dssp             ESTTTTT
T ss_pred             ECCCccc
Confidence            9999765

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=5.5e-48  Score=323.62  Aligned_cols=245  Identities=28%  Similarity=0.346  Sum_probs=212.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++   +.++.++++|++|.++++++++++.+.+ +++|
T Consensus         6 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD   81 (281)
T 3zv4_A            6 EVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH---GGNAVGVVGDVRSLQDQKRAAERCLAAF-GKID   81 (281)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---BTTEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc---CCcEEEEEcCCCCHHHHHHHHHHHHHhc-CCCC
Confidence            78999999999999999999999999999999998887765543   5589999999999999999999999999 7999


Q ss_pred             EEEEcCCCCCCC-CC----CCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHH
Q 024994           81 ILINNAAIAFVK-PT----VDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKG  155 (259)
Q Consensus        81 ~vi~~ag~~~~~-~~----~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~  155 (259)
                      +||||||+.... ++    .+.+.++|++++++|+.+++.++++++|+|.++ .++||++||..+..+.++...|++||+
T Consensus        82 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKa  160 (281)
T 3zv4_A           82 TLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSS-RGSVVFTISNAGFYPNGGGPLYTATKH  160 (281)
T ss_dssp             EEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCGGGTSSSSSCHHHHHHHH
T ss_pred             EEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCeEEEEecchhccCCCCCchhHHHHH
Confidence            999999986432 22    345577899999999999999999999999875 499999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCC-----CchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhC-C
Q 024994          156 AMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGP-----EGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCL-P  229 (259)
Q Consensus       156 a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~-~  229 (259)
                      ++++|+++++.|+++. ||||+|+||+++|++........     ......+.+....|.+|+++|+|++++++||++ +
T Consensus       161 a~~~l~~~la~e~~~~-Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~  239 (281)
T 3zv4_A          161 AVVGLVRQMAFELAPH-VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAYVFFATRG  239 (281)
T ss_dssp             HHHHHHHHHHHHHTTT-SEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTTSSCCCGGGGSHHHHHHHSTT
T ss_pred             HHHHHHHHHHHHhcCC-CEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCCCCCCCHHHHHHHHHHhhccc
Confidence            9999999999999987 99999999999999875432111     111245667778899999999999999999999 7


Q ss_pred             CCCCccccEEEeCCCceeeecc
Q 024994          230 AASYITGQIICVDGGVTVTVNV  251 (259)
Q Consensus       230 ~~~~~~G~~l~~dgG~~~~~~~  251 (259)
                      .+.++||+.|.+|||.++...+
T Consensus       240 ~~~~itG~~i~vdGG~~~~~~~  261 (281)
T 3zv4_A          240 DSLPATGALLNYDGGMGVRGFL  261 (281)
T ss_dssp             TSTTCSSCEEEESSSGGGCCSS
T ss_pred             ccccccCcEEEECCCCccccch
Confidence            8899999999999999876544

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=7.2e-49  Score=326.96  Aligned_cols=239  Identities=31%  Similarity=0.473  Sum_probs=214.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+...          ....++++|++|.++++++++++.+.+ +++|
T Consensus        15 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD   83 (269)
T 3vtz_A           15 KVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV----------NVSDHFKIDVTNEEEVKEAVEKTTKKY-GRID   83 (269)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT----------TSSEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc----------CceeEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence            79999999999999999999999999999999876541          256778999999999999999999999 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||+....++.+.+.++|++++++|+.+++.++++++|+|.+++.++||++||..+..+.++...|++||+++++|
T Consensus        84 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l  163 (269)
T 3vtz_A           84 ILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGL  163 (269)
T ss_dssp             EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHHHHHHHH
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCChhHHHHHHHHHHH
Confidence            99999999888888899999999999999999999999999999988789999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCc------CCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE------EGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYI  234 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~  234 (259)
                      +++++.|+++ +|+||+|+||+++|++.....      .........+.+....|.+|+.+|+|++++++||+++.+.++
T Consensus       164 ~~~la~e~~~-~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~i  242 (269)
T 3vtz_A          164 TRSVAIDYAP-KIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLASDRSSFI  242 (269)
T ss_dssp             HHHHHHHHTT-TEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHhcC-CCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCccCCC
Confidence            9999999988 899999999999999864321      111113355666778899999999999999999999999999


Q ss_pred             cccEEEeCCCceeeecc
Q 024994          235 TGQIICVDGGVTVTVNV  251 (259)
Q Consensus       235 ~G~~l~~dgG~~~~~~~  251 (259)
                      ||+.|++|||....+.+
T Consensus       243 tG~~i~vdGG~~~~~~~  259 (269)
T 3vtz_A          243 TGACLTVDGGLLSKLPI  259 (269)
T ss_dssp             CSCEEEESTTGGGBCCC
T ss_pred             cCcEEEECCCccccCCC
Confidence            99999999999887665

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=3.3e-48  Score=320.05  Aligned_cols=234  Identities=25%  Similarity=0.299  Sum_probs=208.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcC-CcEEEEEecC--CCHHHHHHHHHHHHHHcCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG-FKVTGSVCDL--SSREQREKLIETVTSIFQG   77 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~--~~~~~~~~~~~~~~~~~~~   77 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++...+ .++.++.+|+  +|.++++++++++.+.+ +
T Consensus        13 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~-g   91 (252)
T 3f1l_A           13 RIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNY-P   91 (252)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHHC-S
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHhC-C
Confidence            789999999999999999999999999999999999988888876543 3788999999  99999999999999999 7


Q ss_pred             CccEEEEcCCCC-CCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHH
Q 024994           78 KLNILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGA  156 (259)
Q Consensus        78 ~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  156 (259)
                      ++|+||||||.. ...++.+.+.++|++++++|+.+++.++++++|+|.+++.++||++||..+..+.++...|++||++
T Consensus        92 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a  171 (252)
T 3f1l_A           92 RLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFA  171 (252)
T ss_dssp             CCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCCCchhHHHHHH
Confidence            999999999985 4468889999999999999999999999999999998888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccc
Q 024994          157 MNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG  236 (259)
Q Consensus       157 ~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G  236 (259)
                      +++|+++++.|+++. ||||+|+||+++|++.......             .+..++.+|+|++++++||+++.++++||
T Consensus       172 ~~~l~~~la~e~~~~-irvn~v~PG~v~t~~~~~~~~~-------------~~~~~~~~p~dva~~~~~L~s~~~~~itG  237 (252)
T 3f1l_A          172 TEGMMQVLADEYQQR-LRVNCINPGGTRTAMRASAFPT-------------EDPQKLKTPADIMPLYLWLMGDDSRRKTG  237 (252)
T ss_dssp             HHHHHHHHHHHTTTT-CEEEEEECCSBSSHHHHHHCTT-------------CCGGGSBCTGGGHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHhcCC-cEEEEEecCcccCchhhhhCCc-------------cchhccCCHHHHHHHHHHHcCccccCCCC
Confidence            999999999999887 9999999999999875432111             12235678999999999999999999999


Q ss_pred             cEEEeCCCceeee
Q 024994          237 QIICVDGGVTVTV  249 (259)
Q Consensus       237 ~~l~~dgG~~~~~  249 (259)
                      +.|.+|||...+.
T Consensus       238 ~~i~vdgG~~~~~  250 (252)
T 3f1l_A          238 MTFDAQPGRKPGI  250 (252)
T ss_dssp             CEEESSCC-----
T ss_pred             CEEEeCCCcCCCC
Confidence            9999999987653

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=1.3e-48  Score=322.60  Aligned_cols=240  Identities=31%  Similarity=0.413  Sum_probs=182.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++++|++|.++++++++++.+.+ +++|
T Consensus        10 k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id   88 (253)
T 3qiv_A           10 KVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEF-GGID   88 (253)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH-SCCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence            789999999999999999999999999999999999999999888878899999999999999999999999999 7999


Q ss_pred             EEEEcCCCC---CCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHH
Q 024994           81 ILINNAAIA---FVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAM  157 (259)
Q Consensus        81 ~vi~~ag~~---~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~  157 (259)
                      +||||||+.   ...++.+.+.++|++++++|+.+++.++++++|.|.+++.++||++||..+.   ++...|++||+++
T Consensus        89 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~---~~~~~Y~asK~a~  165 (253)
T 3qiv_A           89 YLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAW---LYSNYYGLAKVGI  165 (253)
T ss_dssp             EEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC--------------CCHHHH
T ss_pred             EEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCcccc---CCCchhHHHHHHH
Confidence            999999984   4456778899999999999999999999999999998888999999998876   4567899999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcccc
Q 024994          158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ  237 (259)
Q Consensus       158 ~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~  237 (259)
                      ++|+++++.|++++||++|+|+||+++|++.......    ...+.+....|.+++.+|+|++++++|++++...+++|+
T Consensus       166 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~  241 (253)
T 3qiv_A          166 NGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPK----EMVDDIVKGLPLSRMGTPDDLVGMCLFLLSDEASWITGQ  241 (253)
T ss_dssp             HHHHHHHHHHTTTTTEEEEEEEC-----------------------------------CCHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcH----HHHHHHhccCCCCCCCCHHHHHHHHHHHcCccccCCCCC
Confidence            9999999999999999999999999999987654322    245556677888999999999999999999988999999


Q ss_pred             EEEeCCCceee
Q 024994          238 IICVDGGVTVT  248 (259)
Q Consensus       238 ~l~~dgG~~~~  248 (259)
                      +|++|||..++
T Consensus       242 ~~~vdgG~~~~  252 (253)
T 3qiv_A          242 IFNVDGGQIIR  252 (253)
T ss_dssp             EEEC-------
T ss_pred             EEEECCCeecC
Confidence            99999998875

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=2.7e-48  Score=324.65  Aligned_cols=240  Identities=30%  Similarity=0.452  Sum_probs=215.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++...+ ++.++++|++|.++++++++++.+.+ +++|
T Consensus        30 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD  107 (276)
T 2b4q_A           30 RIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIPADLSSEAGARRLAQALGELS-ARLD  107 (276)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS-CEEECCCCTTSHHHHHHHHHHHHHHC-SCCS
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-ceEEEEeeCCCHHHHHHHHHHHHHhc-CCCC
Confidence            689999999999999999999999999999999998888877776544 78899999999999999999999999 7899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCC----CEEEEecCCCccCCCCCCh-hhhhhHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGN----GSIVFISSVGGVRGIPSVS-LYGAYKG  155 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~----~~ii~isS~~~~~~~~~~~-~Y~~sK~  155 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.++++++|.|++++.    ++||++||..+..+.++.. .|++||+
T Consensus       108 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~~~~~Y~asK~  187 (276)
T 2b4q_A          108 ILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKA  187 (276)
T ss_dssp             EEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCCSCTTHHHHHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCCCccccHHHHH
Confidence            9999999987778888999999999999999999999999999987655    8999999999998888888 9999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhh--cCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 024994          156 AMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIAR--QTPIGRAGEPDEVSSLVAFLCLPAASY  233 (259)
Q Consensus       156 a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~va~~~~~l~~~~~~~  233 (259)
                      ++++|+++++.|++++||+||+|+||+++|++.......     ....+..  ..|.+++.+|+|++++++|++++.+.+
T Consensus       188 a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-----~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~  262 (276)
T 2b4q_A          188 ALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIAND-----PQALEADSASIPMGRWGRPEEMAALAISLAGTAGAY  262 (276)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHC-----HHHHHHHHHTSTTSSCCCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchh-----HHHHHHhhcCCCCCCcCCHHHHHHHHHHHhCccccC
Confidence            999999999999999999999999999999986432111     2233334  678899999999999999999988899


Q ss_pred             ccccEEEeCCCcee
Q 024994          234 ITGQIICVDGGVTV  247 (259)
Q Consensus       234 ~~G~~l~~dgG~~~  247 (259)
                      ++|++|.+|||..+
T Consensus       263 ~tG~~i~vdGG~~L  276 (276)
T 2b4q_A          263 MTGNVIPIDGGFHL  276 (276)
T ss_dssp             CCSCEEEESTTTTC
T ss_pred             CCCCEEEeCCCccC
Confidence            99999999999753

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=2.4e-48  Score=321.60  Aligned_cols=248  Identities=32%  Similarity=0.447  Sum_probs=213.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+. ++..+++.    . .++++|++|.++++++++++.+.+ +++|
T Consensus         7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~----~-~~~~~D~~~~~~~~~~~~~~~~~~-g~iD   79 (256)
T 2d1y_A            7 KGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG----G-AFFQVDLEDERERVRFVEEAAYAL-GRVD   79 (256)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT----C-EEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh----C-CEEEeeCCCHHHHHHHHHHHHHHc-CCCC
Confidence            689999999999999999999999999999999887 66555553    4 788999999999999999999999 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.++++++|.|.+++.++||++||..+..+.++...|++||+++++|
T Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  159 (256)
T 2d1y_A           80 VLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNL  159 (256)
T ss_dssp             EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCChhHHHHHHHHHHH
Confidence            99999999877788899999999999999999999999999999988789999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCC-CCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEG-PEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      +++++.|++++||++|+|+||+++|++....... .......+.+....|.+++.+|+|++++++|++++.+.+++|+.+
T Consensus       160 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~  239 (256)
T 2d1y_A          160 TRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFITGAIL  239 (256)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCCCCEE
Confidence            9999999999999999999999999975432000 000112233445678899999999999999999988889999999


Q ss_pred             EeCCCceeeecccccc
Q 024994          240 CVDGGVTVTVNVNGLR  255 (259)
Q Consensus       240 ~~dgG~~~~~~~~~~~  255 (259)
                      ++|||..++..+.|.+
T Consensus       240 ~v~gG~~~~~~~~~~~  255 (256)
T 2d1y_A          240 PVDGGMTASFMMAGRP  255 (256)
T ss_dssp             EESTTGGGBC------
T ss_pred             EECCCccccccccCCc
Confidence            9999998887766653

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=4.2e-48  Score=320.82  Aligned_cols=244  Identities=30%  Similarity=0.404  Sum_probs=212.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++...  +.++.++++|++|.++++++++++.+.+ + 
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g-   85 (260)
T 2z1n_A            8 KLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLG-G-   85 (260)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTT-C-
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhc-C-
Confidence            68999999999999999999999999999999999888877777543  3378899999999999999999999988 6 


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      +|+||||||.....++.+.+.++|++++++|+.+++.++++++|.|.+++.++||++||..+..+.++...|++||++++
T Consensus        86 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~  165 (260)
T 2z1n_A           86 ADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVI  165 (260)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHTHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCchhHHHHHHHH
Confidence            99999999988777888899999999999999999999999999998877899999999999999999999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcC------CCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCC
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE------GPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAAS  232 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  232 (259)
                      +|+++++.|++++||+||+|+||+++|++......      ..........+....|.+++.+|+|++++++|++++.++
T Consensus       166 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~~  245 (260)
T 2z1n_A          166 GVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVAFLASEKAS  245 (260)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------CCTTSSCCCHHHHHHHHHHHTSGGGT
T ss_pred             HHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCcccc
Confidence            99999999999999999999999999998752100      000000123445567889999999999999999998889


Q ss_pred             CccccEEEeCCCce
Q 024994          233 YITGQIICVDGGVT  246 (259)
Q Consensus       233 ~~~G~~l~~dgG~~  246 (259)
                      +++|++|.+|||.+
T Consensus       246 ~~tG~~i~vdGG~~  259 (260)
T 2z1n_A          246 FITGAVIPVDGGAH  259 (260)
T ss_dssp             TCCSCEEEESTTTT
T ss_pred             CCCCCEEEeCCCcc
Confidence            99999999999975

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=7.9e-48  Score=319.13  Aligned_cols=232  Identities=19%  Similarity=0.267  Sum_probs=199.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.++..+...+.     .+.++.+|++|.++++++++++.+.+ +++|
T Consensus        28 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD  101 (260)
T 3gem_A           28 APILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQA-----GAVALYGDFSCETGIMAFIDLLKTQT-SSLR  101 (260)
T ss_dssp             CCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHH-----TCEEEECCTTSHHHHHHHHHHHHHHC-SCCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhc-----CCeEEECCCCCHHHHHHHHHHHHHhc-CCCC
Confidence            68999999999999999999999999999999987765444332     37889999999999999999999999 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||.....+ .+.+.++|++++++|+.+++.++++++|+|.+++.++||++||..+..+.++...|++||+++++|
T Consensus       102 ~lv~nAg~~~~~~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l  180 (260)
T 3gem_A          102 AVVHNASEWLAET-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATKAGLESL  180 (260)
T ss_dssp             EEEECCCCCCCCC-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSSCHHHHHHHHHHHHH
T ss_pred             EEEECCCccCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCcHhHHHHHHHHHHH
Confidence            9999999876655 567889999999999999999999999999988889999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC  240 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~  240 (259)
                      +++++.|+++ +|+||+|+||+++|++...       ......+....|.+++++|+|++++++||+  .+.++||+.|+
T Consensus       181 ~~~la~e~~~-~Irvn~v~PG~v~t~~~~~-------~~~~~~~~~~~p~~r~~~~edva~~v~~L~--~~~~itG~~i~  250 (260)
T 3gem_A          181 TLSFAARFAP-LVKVNGIAPALLMFQPKDD-------AAYRANALAKSALGIEPGAEVIYQSLRYLL--DSTYVTGTTLT  250 (260)
T ss_dssp             HHHHHHHHTT-TCEEEEEEECTTCC----------------------CCSCCCCCTHHHHHHHHHHH--HCSSCCSCEEE
T ss_pred             HHHHHHHHCC-CCEEEEEeecccccCCCCC-------HHHHHHHHhcCCCCCCCCHHHHHHHHHHHh--hCCCCCCCEEE
Confidence            9999999988 6999999999999987531       113455667789999999999999999999  56899999999


Q ss_pred             eCCCceeee
Q 024994          241 VDGGVTVTV  249 (259)
Q Consensus       241 ~dgG~~~~~  249 (259)
                      +|||.+++.
T Consensus       251 vdGG~~~~~  259 (260)
T 3gem_A          251 VNGGRHVKG  259 (260)
T ss_dssp             ESTTTTTC-
T ss_pred             ECCCcccCC
Confidence            999998753

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=1.8e-48  Score=328.14  Aligned_cols=241  Identities=29%  Similarity=0.405  Sum_probs=215.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhH-HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE-LDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+. .+...+.+...+.++.++++|++|.++++++++++.+++ +++
T Consensus        48 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~i  126 (291)
T 3ijr_A           48 KNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQL-GSL  126 (291)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHH-SSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-CCC
Confidence            689999999999999999999999999999998764 444455555667789999999999999999999999999 799


Q ss_pred             cEEEEcCCCCC-CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           80 NILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        80 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      |+||||||... ..++.+.+.++|++++++|+.+++.++++++|+|++  .++||++||..+..+.++...|++||++++
T Consensus       127 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asKaa~~  204 (291)
T 3ijr_A          127 NILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ--GDVIINTASIVAYEGNETLIDYSATKGAIV  204 (291)
T ss_dssp             CEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT--TCEEEEECCTHHHHCCTTCHHHHHHHHHHH
T ss_pred             CEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCEEEEEechHhcCCCCCChhHHHHHHHHH
Confidence            99999999864 357788899999999999999999999999999854  589999999999999999999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI  238 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~  238 (259)
                      +|+++++.|++++||+||+|+||+++|++.....    .......+....|.+|+++|+|++++++||+++.+.++||+.
T Consensus       205 ~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~----~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~  280 (291)
T 3ijr_A          205 AFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSF----DEKKVSQFGSNVPMQRPGQPYELAPAYVYLASSDSSYVTGQM  280 (291)
T ss_dssp             HHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHS----CHHHHHHTTTTSTTSSCBCGGGTHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccC----CHHHHHHHHccCCCCCCcCHHHHHHHHHHHhCCccCCCcCCE
Confidence            9999999999999999999999999999864322    123455667788999999999999999999999999999999


Q ss_pred             EEeCCCceee
Q 024994          239 ICVDGGVTVT  248 (259)
Q Consensus       239 l~~dgG~~~~  248 (259)
                      |.+|||..+.
T Consensus       281 i~vdGG~~~~  290 (291)
T 3ijr_A          281 IHVNGGVIVN  290 (291)
T ss_dssp             EEESSSCCCC
T ss_pred             EEECCCcccC
Confidence            9999998763

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=2.1e-48  Score=325.54  Aligned_cols=245  Identities=33%  Similarity=0.494  Sum_probs=219.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++++|++|.++++++++++.+.+ +++|
T Consensus        23 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD  101 (277)
T 2rhc_B           23 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERY-GPVD  101 (277)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT-CSCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHh-CCCC
Confidence            689999999999999999999999999999999998888888887666789999999999999999999999999 7899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHH--hHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPL--FKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~--~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.++++++|.  |.+++.++||++||..+..+.++...|++||++++
T Consensus       102 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~  181 (277)
T 2rhc_B          102 VLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVV  181 (277)
T ss_dssp             EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCCCCccHHHHHHHHH
Confidence            9999999887778888999999999999999999999999999  88776799999999999999999999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcC------CCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCC
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE------GPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAAS  232 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  232 (259)
                      +|+++++.|+++.||+||+|+||+++|++......      ........+.+....|.+++.+|+|++++++|++++.+.
T Consensus       182 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s~~~~  261 (277)
T 2rhc_B          182 GFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAA  261 (277)
T ss_dssp             HHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhc
Confidence            99999999999999999999999999998643210      000012334455667899999999999999999998889


Q ss_pred             CccccEEEeCCCce
Q 024994          233 YITGQIICVDGGVT  246 (259)
Q Consensus       233 ~~~G~~l~~dgG~~  246 (259)
                      +++|++|.+|||..
T Consensus       262 ~~tG~~~~vdGG~~  275 (277)
T 2rhc_B          262 AVTAQALNVCGGLG  275 (277)
T ss_dssp             TCCSCEEEESTTCC
T ss_pred             CCCCcEEEECCCcc
Confidence            99999999999965

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=4.9e-48  Score=319.30  Aligned_cols=242  Identities=29%  Similarity=0.377  Sum_probs=219.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEe-eCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC---
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTC-SRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ---   76 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~---   76 (259)
                      |++|||||++|||++++++|+++|++|+++ .|+.+..++..+++...+.++.++.+|++|.++++++++++.+.++   
T Consensus         8 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~   87 (255)
T 3icc_A            8 KVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNRT   87 (255)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhcccc
Confidence            789999999999999999999999999885 7788888888888887788899999999999999999999988762   


Q ss_pred             --CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhH
Q 024994           77 --GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYK  154 (259)
Q Consensus        77 --~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  154 (259)
                        +++|+||||||+....++.+.+.++|++++++|+.+++.++++++|+|.+  .++||++||..+..+.++...|++||
T Consensus        88 ~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~Y~asK  165 (255)
T 3icc_A           88 GSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD--NSRIINISSAATRISLPDFIAYSMTK  165 (255)
T ss_dssp             SSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             cCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCC--CCEEEEeCChhhccCCCCcchhHHhH
Confidence              24999999999987778888999999999999999999999999999843  58999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 024994          155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYI  234 (259)
Q Consensus       155 ~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~  234 (259)
                      +++++|+++++.|+.++||+||+|+||+++|++.......   ...........|.+++.+|+|++++++||+++.++++
T Consensus       166 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  242 (255)
T 3icc_A          166 GAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSD---PMMKQYATTISAFNRLGEVEDIADTAAFLASPDSRWV  242 (255)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTS---HHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhccc---HHHHHhhhccCCcCCCCCHHHHHHHHHHHhCcccCCc
Confidence            9999999999999999999999999999999998765432   2345666777899999999999999999999999999


Q ss_pred             cccEEEeCCCcee
Q 024994          235 TGQIICVDGGVTV  247 (259)
Q Consensus       235 ~G~~l~~dgG~~~  247 (259)
                      +|++|.+|||.++
T Consensus       243 tG~~i~vdgG~~l  255 (255)
T 3icc_A          243 TGQLIDVSGGSCL  255 (255)
T ss_dssp             CSCEEEESSSTTC
T ss_pred             cCCEEEecCCeeC
Confidence            9999999999864

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=2.4e-47  Score=317.47  Aligned_cols=238  Identities=30%  Similarity=0.388  Sum_probs=219.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEE-eeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHT-CSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||++|||++++++|+++|++|++ ..|+.+..++..+++...+.++.++++|++|.++++++++++.+.+ +++
T Consensus        27 k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g~i  105 (267)
T 4iiu_A           27 RSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQH-GAW  105 (267)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-CCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh-CCc
Confidence            68999999999999999999999999966 5678888888888888777889999999999999999999999999 799


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhH-hCCCCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFK-ASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      |+||||||.....++.+.+.++|++++++|+.+++.+++.++|.|. +.+.++||++||..+..+.++...|++||++++
T Consensus       106 d~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~  185 (267)
T 4iiu_A          106 YGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYSAAKAGII  185 (267)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTTCHHHHHHHHHHH
T ss_pred             cEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCCCchhHHHHHHHH
Confidence            9999999998888888899999999999999999999999988886 566799999999999999999999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI  238 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~  238 (259)
                      +|+++++.|++++||+|++|+||+++|++....      ...........|.+++.+|+|++++++||+++.+.++||+.
T Consensus       186 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~------~~~~~~~~~~~p~~~~~~~edva~~~~~L~s~~~~~itG~~  259 (267)
T 4iiu_A          186 GATKALAIELAKRKITVNCIAPGLIDTGMIEME------ESALKEAMSMIPMKRMGQAEEVAGLASYLMSDIAGYVTRQV  259 (267)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC------HHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHhhcCeEEEEEEEeeecCCccccc------HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCcccCccCCE
Confidence            999999999999999999999999999987643      33566677888999999999999999999999999999999


Q ss_pred             EEeCCCc
Q 024994          239 ICVDGGV  245 (259)
Q Consensus       239 l~~dgG~  245 (259)
                      |.+|||.
T Consensus       260 i~vdGG~  266 (267)
T 4iiu_A          260 ISINGGM  266 (267)
T ss_dssp             EEESTTC
T ss_pred             EEeCCCc
Confidence            9999996

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=8.3e-48  Score=324.91  Aligned_cols=247  Identities=27%  Similarity=0.445  Sum_probs=218.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCC---cEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF---KVTGSVCDLSSREQREKLIETVTSIFQG   77 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++...+.   ++.++++|++|.++++++++++.+.+ +
T Consensus        27 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g  105 (297)
T 1xhl_A           27 KSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF-G  105 (297)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH-S
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhc-C
Confidence            6899999999999999999999999999999999998888888776555   78999999999999999999999999 7


Q ss_pred             CccEEEEcCCCCCCCC--CCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCC-CCChhhhhhH
Q 024994           78 KLNILINNAAIAFVKP--TVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI-PSVSLYGAYK  154 (259)
Q Consensus        78 ~id~vi~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~-~~~~~Y~~sK  154 (259)
                      ++|+||||||.....+  +.+.+.++|++++++|+.+++.++++++|.|.+++ ++||++||..+..+. ++...|++||
T Consensus       106 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~~~~~~~Y~asK  184 (297)
T 1xhl_A          106 KIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHSGYPYYACAK  184 (297)
T ss_dssp             CCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCCTTSHHHHHHH
T ss_pred             CCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCCCCCcchHHHHH
Confidence            9999999999876666  78899999999999999999999999999998776 999999999998888 8899999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCC----CchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 024994          155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGP----EGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPA  230 (259)
Q Consensus       155 ~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  230 (259)
                      +++++|+++++.|++++||+||+|+||+++|++........    ........+....|.+++.+|+|++++++|++++.
T Consensus       185 aa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~l~s~~  264 (297)
T 1xhl_A          185 AALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLADRN  264 (297)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHCHH
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCc
Confidence            99999999999999999999999999999999865431000    00112334445578899999999999999999987


Q ss_pred             -CCCccccEEEeCCCceeee
Q 024994          231 -ASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       231 -~~~~~G~~l~~dgG~~~~~  249 (259)
                       +.+++|+.|.+|||..+..
T Consensus       265 ~~~~itG~~i~vdGG~~~~~  284 (297)
T 1xhl_A          265 LSSYIIGQSIVADGGSTLVM  284 (297)
T ss_dssp             HHTTCCSCEEEESTTGGGCC
T ss_pred             ccCCccCcEEEECCCccccc
Confidence             8899999999999987643

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=3.8e-48  Score=325.33  Aligned_cols=242  Identities=25%  Similarity=0.365  Sum_probs=208.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCC------------hhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRN------------QIELDARLHEWKNKGFKVTGSVCDLSSREQREKLI   68 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   68 (259)
                      |++|||||++|||+++|++|+++|++|++++|+            .+.+++...++...+.++.++++|++|.+++++++
T Consensus        11 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   90 (287)
T 3pxx_A           11 KVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSREL   90 (287)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHH
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHH
Confidence            789999999999999999999999999999998            66777777777777788999999999999999999


Q ss_pred             HHHHHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCC----
Q 024994           69 ETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI----  144 (259)
Q Consensus        69 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~----  144 (259)
                      +++.+.+ +++|+||||||+....  .+.+.++|++++++|+.+++.++++++|+|  .+.++||++||..+..+.    
T Consensus        91 ~~~~~~~-g~id~lv~nAg~~~~~--~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~--~~~g~iv~isS~~~~~~~~~~~  165 (287)
T 3pxx_A           91 ANAVAEF-GKLDVVVANAGICPLG--AHLPVQAFADAFDVDFVGVINTVHAALPYL--TSGASIITTGSVAGLIAAAQPP  165 (287)
T ss_dssp             HHHHHHH-SCCCEEEECCCCCCCC--TTCCTHHHHHHHHHHTHHHHHHHHHHGGGC--CTTCEEEEECCHHHHHHHHCCC
T ss_pred             HHHHHHc-CCCCEEEECCCcCccc--CcCCHHHHHHHhhhhhhhhHHHHHHHHHHh--hcCcEEEEeccchhcccccccc
Confidence            9999999 7999999999987654  337889999999999999999999999999  346899999998887655    


Q ss_pred             -------CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCc------C---CCCchHHHHh--hhh
Q 024994          145 -------PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE------E---GPEGSEFLDG--IAR  206 (259)
Q Consensus       145 -------~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~------~---~~~~~~~~~~--~~~  206 (259)
                             ++...|++||+++++|+++++.|++++||+||+|+||+++|++.....      .   .+........  ...
T Consensus       166 ~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (287)
T 3pxx_A          166 GAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFPAMQ  245 (287)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHGGGGC
T ss_pred             cccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHHHhhhhhhc
Confidence                   667889999999999999999999999999999999999999986421      1   1111111111  223


Q ss_pred             cCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCceee
Q 024994          207 QTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVT  248 (259)
Q Consensus       207 ~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~  248 (259)
                      ..| +++.+|+|++++++||+++.++++||+.|.+|||.+++
T Consensus       246 ~~~-~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~~  286 (287)
T 3pxx_A          246 AMP-TPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAMLK  286 (287)
T ss_dssp             SSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             ccC-CCCCCHHHHHhhHheecchhhcCCCCceEeECchhhhc
Confidence            344 88999999999999999999999999999999998875

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=8.8e-48  Score=322.23  Aligned_cols=249  Identities=28%  Similarity=0.440  Sum_probs=218.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCC---cEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF---KVTGSVCDLSSREQREKLIETVTSIFQG   77 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++...+.   ++.++++|++|.++++++++++.+.+ +
T Consensus         7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g   85 (280)
T 1xkq_A            7 KTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF-G   85 (280)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH-S
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhc-C
Confidence            6899999999999999999999999999999999998888887766555   79999999999999999999999999 7


Q ss_pred             CccEEEEcCCCCCCCC----CCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCC-CCChhhhh
Q 024994           78 KLNILINNAAIAFVKP----TVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI-PSVSLYGA  152 (259)
Q Consensus        78 ~id~vi~~ag~~~~~~----~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~-~~~~~Y~~  152 (259)
                      ++|+||||||.....+    +.+.+.++|++++++|+.+++.++++++|.|.+++ ++||++||..+..+. ++...|++
T Consensus        86 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~~Y~a  164 (280)
T 1xkq_A           86 KIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDFLYYAI  164 (280)
T ss_dssp             CCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCSSHHHHH
T ss_pred             CCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCCCCcccHHHH
Confidence            9999999999876666    77889999999999999999999999999998765 999999999998887 88999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCC----CchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhC
Q 024994          153 YKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGP----EGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCL  228 (259)
Q Consensus       153 sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  228 (259)
                      ||+++++|+++++.|++++||+||+|+||+++|++........    ........+....|.+++.+|+|++++++|+++
T Consensus       165 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v~~l~s  244 (280)
T 1xkq_A          165 AKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFLAD  244 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHHhcC
Confidence            9999999999999999999999999999999999865331000    001123344455788999999999999999999


Q ss_pred             CC-CCCccccEEEeCCCceeeecc
Q 024994          229 PA-ASYITGQIICVDGGVTVTVNV  251 (259)
Q Consensus       229 ~~-~~~~~G~~l~~dgG~~~~~~~  251 (259)
                      +. +.+++|+.|.+|||..+....
T Consensus       245 ~~~~~~~tG~~i~vdgG~~~~~~~  268 (280)
T 1xkq_A          245 RNLSFYILGQSIVADGGTSLVMGT  268 (280)
T ss_dssp             HHHHTTCCSCEEEESTTGGGCBGG
T ss_pred             cccccCccCCeEEECCCcccccCc
Confidence            87 889999999999998775443

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=3.2e-47  Score=325.49  Aligned_cols=239  Identities=26%  Similarity=0.322  Sum_probs=216.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEee-CChhHHHHHHHHHH-hcCCcEEEEEecCCCHH----------------
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCS-RNQIELDARLHEWK-NKGFKVTGSVCDLSSRE----------------   62 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~-r~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~----------------   62 (259)
                      |++|||||++|||++++++|+++|++|++++ |+.+.+++..+++. ..+.++.++++|++|.+                
T Consensus        47 k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~  126 (328)
T 2qhx_A           47 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF  126 (328)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCBCHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccccccccH
Confidence            6899999999999999999999999999999 99998888887776 44568999999999999                


Q ss_pred             -HHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCCCC--------------HHHHHHHHHHhhHhHHHHHHHHHHHhHhC
Q 024994           63 -QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDIT--------------AEDMSTVSSTNFESVFHLSQLAHPLFKAS  127 (259)
Q Consensus        63 -~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~  127 (259)
                       +++++++++.+.+ +++|+||||||+....++.+.+              .++|++++++|+.+++.++++++|.|.++
T Consensus       127 ~~v~~~~~~~~~~~-g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~  205 (328)
T 2qhx_A          127 TRCAELVAACYTHW-GRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT  205 (328)
T ss_dssp             HHHHHHHHHHHHHH-SCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHhc-CCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence             9999999999999 7999999999988777777888              99999999999999999999999999887


Q ss_pred             C------CCEEEEecCCCccCCCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHH
Q 024994          128 G------NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFL  201 (259)
Q Consensus       128 ~------~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~  201 (259)
                      +      .++||++||..+..+.++...|++||+++++|+++++.|++++||+||+|+||+++|++ ...      +...
T Consensus       206 ~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~~------~~~~  278 (328)
T 2qhx_A          206 PAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DMP------PAVW  278 (328)
T ss_dssp             CGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CSC------HHHH
T ss_pred             CCcCCCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-ccc------HHHH
Confidence            6      78999999999999999999999999999999999999999999999999999999998 322      2244


Q ss_pred             HhhhhcCCCC-CCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCcee
Q 024994          202 DGIARQTPIG-RAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTV  247 (259)
Q Consensus       202 ~~~~~~~~~~-~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~  247 (259)
                      +.+....|++ ++.+|+|++++++|++++.+.++||++|.+|||..+
T Consensus       279 ~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~  325 (328)
T 2qhx_A          279 EGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL  325 (328)
T ss_dssp             HHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCCccc
Confidence            5556677888 999999999999999998889999999999999765

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=1.5e-48  Score=324.55  Aligned_cols=236  Identities=32%  Similarity=0.466  Sum_probs=212.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||+++|++|+++|++|++++|+.+.++.           ...+++|++|.++++++++++.+.+ +++|
T Consensus        29 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~-----------~~~~~~Dv~~~~~~~~~~~~~~~~~-g~iD   96 (266)
T 3uxy_A           29 KVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAA-----------DLHLPGDLREAAYADGLPGAVAAGL-GRLD   96 (266)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCC-----------SEECCCCTTSHHHHHHHHHHHHHHH-SCCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHh-----------hhccCcCCCCHHHHHHHHHHHHHhc-CCCC
Confidence            789999999999999999999999999999998765422           2345799999999999999999999 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||+....++.+.+.++|++++++|+.+++.++++++|+|.+++.++||++||..+..+.++...|++||+++++|
T Consensus        97 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l  176 (266)
T 3uxy_A           97 IVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALASL  176 (266)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTTBHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCChHHHHHHHHHHHH
Confidence            99999999888888899999999999999999999999999999988889999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcC--CCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE--GPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI  238 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~  238 (259)
                      +++++.|++++||+||+|+||+++|++......  ....+...+.+....|.+++.+|+|++++++||+++.++++||+.
T Consensus       177 ~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~  256 (266)
T 3uxy_A          177 TQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFLASDAARYLCGSL  256 (266)
T ss_dssp             HHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCCE
Confidence            999999999999999999999999998643221  112233446677788999999999999999999999999999999


Q ss_pred             EEeCCCceee
Q 024994          239 ICVDGGVTVT  248 (259)
Q Consensus       239 l~~dgG~~~~  248 (259)
                      |.+|||.+++
T Consensus       257 i~vdGG~~~s  266 (266)
T 3uxy_A          257 VEVNGGKAVA  266 (266)
T ss_dssp             EEESTTCCCC
T ss_pred             EEECcCEeCC
Confidence            9999998764

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=3.3e-47  Score=320.01  Aligned_cols=240  Identities=29%  Similarity=0.347  Sum_probs=212.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCCh-hHHHHHHHHHH-hcCCcEEEEEecCCC----HHHHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ-IELDARLHEWK-NKGFKVTGSVCDLSS----REQREKLIETVTSI   74 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~-~~~~~~~~~~~-~~~~~~~~~~~D~~~----~~~~~~~~~~~~~~   74 (259)
                      |++|||||++|||++++++|+++|++|++++|+. +++++..+++. ..+.++.++++|++|    .++++++++++.+.
T Consensus        24 k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~~~  103 (288)
T 2x9g_A           24 PAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCFRA  103 (288)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHHHh
Confidence            6899999999999999999999999999999998 88888777776 446689999999999    99999999999999


Q ss_pred             cCCCccEEEEcCCCCCCCCC-----CC-----CCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC------CCEEEEecCC
Q 024994           75 FQGKLNILINNAAIAFVKPT-----VD-----ITAEDMSTVSSTNFESVFHLSQLAHPLFKASG------NGSIVFISSV  138 (259)
Q Consensus        75 ~~~~id~vi~~ag~~~~~~~-----~~-----~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~------~~~ii~isS~  138 (259)
                      + +++|+||||||+....++     .+     .+.++|++++++|+.+++.+++.++|.|.+++      .++||++||.
T Consensus       104 ~-g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~  182 (288)
T 2x9g_A          104 F-GRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDA  182 (288)
T ss_dssp             H-SCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEECCT
T ss_pred             c-CCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEecc
Confidence            9 799999999998766666     56     78899999999999999999999999998765      6899999999


Q ss_pred             CccCCCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCC-CCHH
Q 024994          139 GGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRA-GEPD  217 (259)
Q Consensus       139 ~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  217 (259)
                      .+..+.++...|++||+++++|+++++.|++++||+||+|+||+++|++ . ..     ......+....|.+++ .+|+
T Consensus       183 ~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~~-----~~~~~~~~~~~p~~r~~~~pe  255 (288)
T 2x9g_A          183 MVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-MG-----EEEKDKWRRKVPLGRREASAE  255 (288)
T ss_dssp             TTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-SC-----HHHHHHHHHTCTTTSSCCCHH
T ss_pred             cccCCCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-cC-----hHHHHHHHhhCCCCCCCCCHH
Confidence            9999999999999999999999999999999999999999999999998 3 21     1233445566788998 9999


Q ss_pred             HHHHHHHHHhCCCCCCccccEEEeCCCceee
Q 024994          218 EVSSLVAFLCLPAASYITGQIICVDGGVTVT  248 (259)
Q Consensus       218 ~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~  248 (259)
                      |++++++|++++.+.++||+.|.+|||..+.
T Consensus       256 dvA~~v~~l~s~~~~~itG~~i~vdGG~~~~  286 (288)
T 2x9g_A          256 QIADAVIFLVSGSAQYITGSIIKVDGGLSLV  286 (288)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHHHhCccccCccCCEEEECcchhhh
Confidence            9999999999998899999999999998654

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=3.9e-48  Score=320.00  Aligned_cols=238  Identities=32%  Similarity=0.401  Sum_probs=213.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++   +.++.++++|++|.++++++++++.+.+ +++|
T Consensus         6 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~iD   81 (254)
T 1hdc_A            6 KTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEF-GSVD   81 (254)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence            68999999999999999999999999999999998877765554   3478899999999999999999999999 7899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.+++.++|.|++++.++||++||..+..+.++...|++||+++++|
T Consensus        82 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~  161 (254)
T 1hdc_A           82 GLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGL  161 (254)
T ss_dssp             EEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCchhHHHHHHHHHHH
Confidence            99999998877788889999999999999999999999999999887789999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCC-CHHHHHHHHHHHhCCCCCCccccEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAG-EPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      +++++.|++++||+||+|+||+++|++.......     ..+.+....|.+++. +|+|++++++|++++.+.+++|+.+
T Consensus       162 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-----~~~~~~~~~p~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~  236 (254)
T 1hdc_A          162 SKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIR-----QGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAEL  236 (254)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCC-----CSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHhhhcCeEEEEEecccCcCccccccchh-----HHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCCCCCEE
Confidence            9999999999999999999999999986432111     112233446788899 9999999999999988899999999


Q ss_pred             EeCCCcee
Q 024994          240 CVDGGVTV  247 (259)
Q Consensus       240 ~~dgG~~~  247 (259)
                      .+|||..+
T Consensus       237 ~vdgG~~~  244 (254)
T 1hdc_A          237 AVDGGWTT  244 (254)
T ss_dssp             EESTTTTT
T ss_pred             EECCCccc
Confidence            99999765

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=4.6e-48  Score=319.70  Aligned_cols=244  Identities=32%  Similarity=0.402  Sum_probs=213.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+  +...+++...+.++.++++|++|.++++++++++.+.+ +++|
T Consensus         5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~id   81 (255)
T 2q2v_A            5 KTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREF-GGVD   81 (255)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHH-SSCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHc-CCCC
Confidence            78999999999999999999999999999999876  44555565556678899999999999999999999999 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.++++++|.|.+++.++||++||..+..+.++...|++||+++++|
T Consensus        82 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  161 (255)
T 2q2v_A           82 ILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGL  161 (255)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCCchhHHHHHHHHHHH
Confidence            99999998877788889999999999999999999999999999988789999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCC-CC----chHHHHhh-hhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEG-PE----GSEFLDGI-ARQTPIGRAGEPDEVSSLVAFLCLPAASYI  234 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-~~----~~~~~~~~-~~~~~~~~~~~~~~va~~~~~l~~~~~~~~  234 (259)
                      +++++.|++++||+||+|+||+++|++....... ..    .......+ ....|.+++.+|+|++++++|++++.+.++
T Consensus       162 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~  241 (255)
T 2q2v_A          162 TKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCSEAGSQV  241 (255)
T ss_dssp             HHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTTCCCBCHHHHHHHHHHHTSGGGTTC
T ss_pred             HHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCCccCCC
Confidence            9999999999999999999999999986432100 00    00001223 455788999999999999999999888999


Q ss_pred             cccEEEeCCCcee
Q 024994          235 TGQIICVDGGVTV  247 (259)
Q Consensus       235 ~G~~l~~dgG~~~  247 (259)
                      +|+.|.+|||..+
T Consensus       242 tG~~~~vdgG~~~  254 (255)
T 2q2v_A          242 RGAAWNVDGGWLA  254 (255)
T ss_dssp             CSCEEEESTTGGG
T ss_pred             CCCEEEECCCccC
Confidence            9999999999764

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=2.7e-47  Score=317.01  Aligned_cols=240  Identities=26%  Similarity=0.407  Sum_probs=217.1

Q ss_pred             CEEEEEcCc--chHHHHHHHHHHHCCCEEEEeeCChhHH-HHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024994            1 MTALVTGGT--RGIGHATVEELARFGAIVHTCSRNQIEL-DARLHEWKN-KGFKVTGSVCDLSSREQREKLIETVTSIFQ   76 (259)
Q Consensus         1 k~~lItG~s--~giG~~~a~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (259)
                      |++|||||+  +|||++++++|+++|++|++++|+.+.. ++..+++.. .+.++.++++|++|.++++++++++.+.+ 
T Consensus        21 k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-   99 (267)
T 3gdg_A           21 KVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVADF-   99 (267)
T ss_dssp             CEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHHT-
T ss_pred             CEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHHc-
Confidence            789999999  9999999999999999999999886654 555556543 36789999999999999999999999999 


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCC--CCChhhhhhH
Q 024994           77 GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI--PSVSLYGAYK  154 (259)
Q Consensus        77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~--~~~~~Y~~sK  154 (259)
                      +++|+||||||+....++.+.+.++|++++++|+.+++.++++++|+|.+++.++||++||..+..+.  ++...|++||
T Consensus       100 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK  179 (267)
T 3gdg_A          100 GQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYNVAK  179 (267)
T ss_dssp             SCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSSSCCHHHHHHH
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCCCCCCcchHHH
Confidence            79999999999988888889999999999999999999999999999998878999999999988775  5789999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 024994          155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYI  234 (259)
Q Consensus       155 ~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~  234 (259)
                      +++++|+++++.|+++. |+||+|+||+++|++.....     +...+.+....|.+|+.+|+|++++++||+++.+.++
T Consensus       180 ~a~~~~~~~la~e~~~~-i~v~~v~PG~v~t~~~~~~~-----~~~~~~~~~~~~~~r~~~~~dva~~~~~l~s~~~~~i  253 (267)
T 3gdg_A          180 AGCIHMARSLANEWRDF-ARVNSISPGYIDTGLSDFVP-----KETQQLWHSMIPMGRDGLAKELKGAYVYFASDASTYT  253 (267)
T ss_dssp             HHHHHHHHHHHHHTTTT-CEEEEEEECCEECSCGGGSC-----HHHHHHHHTTSTTSSCEETHHHHHHHHHHHSTTCTTC
T ss_pred             HHHHHHHHHHHHHhccC-cEEEEEECCccccchhhhCC-----HHHHHHHHhcCCCCCCcCHHHHHhHhheeecCccccc
Confidence            99999999999999887 99999999999999876432     2356667788899999999999999999999999999


Q ss_pred             cccEEEeCCCcee
Q 024994          235 TGQIICVDGGVTV  247 (259)
Q Consensus       235 ~G~~l~~dgG~~~  247 (259)
                      ||+.|.+|||.++
T Consensus       254 tG~~i~vdgG~~~  266 (267)
T 3gdg_A          254 TGADLLIDGGYTT  266 (267)
T ss_dssp             CSCEEEESTTGGG
T ss_pred             cCCEEEECCceec
Confidence            9999999999875

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=1.2e-47  Score=318.66  Aligned_cols=244  Identities=30%  Similarity=0.404  Sum_probs=208.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhH-HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE-LDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+. .+...+.+...+.++.++++|++|.++++++++++.+.+ +++
T Consensus         8 k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g~i   86 (264)
T 3i4f_A            8 RHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHF-GKI   86 (264)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHH-SCC
T ss_pred             CEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh-CCC
Confidence            689999999999999999999999999999776554 444444445556689999999999999999999999999 799


Q ss_pred             cEEEEcCC--CCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCC-Cc-cCCCCCChhhhhhHH
Q 024994           80 NILINNAA--IAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSV-GG-VRGIPSVSLYGAYKG  155 (259)
Q Consensus        80 d~vi~~ag--~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~-~~-~~~~~~~~~Y~~sK~  155 (259)
                      |+||||||  .....++.+.+.++|++++++|+.+++.++++++|+|.+++.++||++||. .. ..+.++...|++||+
T Consensus        87 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y~asKa  166 (264)
T 3i4f_A           87 DFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAKV  166 (264)
T ss_dssp             CEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCCTTCHHHHHHHH
T ss_pred             CEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCCCCCchhHHHHH
Confidence            99999999  445567888999999999999999999999999999998888999999998 44 566778899999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcc
Q 024994          156 AMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT  235 (259)
Q Consensus       156 a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~  235 (259)
                      ++++|+++++.|++++||+||+|+||+++|++.....     +..........|.+++.+|+|++++++|++++.+.++|
T Consensus       167 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-----~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~~~it  241 (264)
T 3i4f_A          167 GLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATI-----QEARQLKEHNTPIGRSGTGEDIARTISFLCEDDSDMIT  241 (264)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCH-----HHHHHC--------CCCCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhcc-----HHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCcccCCCC
Confidence            9999999999999999999999999999999876542     22445556678999999999999999999999889999


Q ss_pred             ccEEEeCCCceeeec
Q 024994          236 GQIICVDGGVTVTVN  250 (259)
Q Consensus       236 G~~l~~dgG~~~~~~  250 (259)
                      |++|++|||.+....
T Consensus       242 G~~i~vdGG~~~~~~  256 (264)
T 3i4f_A          242 GTIIEVTGAVDVIHR  256 (264)
T ss_dssp             SCEEEESCSCCCCC-
T ss_pred             CcEEEEcCceeeccC
Confidence            999999999887543

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=4.1e-47  Score=317.43  Aligned_cols=238  Identities=26%  Similarity=0.335  Sum_probs=209.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeC-ChhHHHHHHHHHHhc-CCcEEEEEecCCCH----HHHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSR-NQIELDARLHEWKNK-GFKVTGSVCDLSSR----EQREKLIETVTSI   74 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~----~~~~~~~~~~~~~   74 (259)
                      |++|||||++|||++++++|+++|++|++++| +.+.+++..+++... +.++.++++|++|.    ++++++++++.+.
T Consensus        12 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   91 (276)
T 1mxh_A           12 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   91 (276)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHHHh
Confidence            68999999999999999999999999999999 888888887777654 56789999999999    9999999999999


Q ss_pred             cCCCccEEEEcCCCCCCCCCCCCCH-----------HHHHHHHHHhhHhHHHHHHHHHHHhHhCCC------CEEEEecC
Q 024994           75 FQGKLNILINNAAIAFVKPTVDITA-----------EDMSTVSSTNFESVFHLSQLAHPLFKASGN------GSIVFISS  137 (259)
Q Consensus        75 ~~~~id~vi~~ag~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~------~~ii~isS  137 (259)
                      + +++|+||||||+....++.+.+.           ++|++++++|+.+++.++++++|+|. ++.      ++||++||
T Consensus        92 ~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~~~~~g~iv~isS  169 (276)
T 1mxh_A           92 F-GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EGGAWRSRNLSVVNLCD  169 (276)
T ss_dssp             H-SCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC--------CCCEEEEEECC
T ss_pred             c-CCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cCCCCCCCCcEEEEECc
Confidence            9 78999999999887777888888           99999999999999999999999997 545      89999999


Q ss_pred             CCccCCCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCC-CCCH
Q 024994          138 VGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGR-AGEP  216 (259)
Q Consensus       138 ~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  216 (259)
                      ..+..+.++...|++||+++++|+++++.|++++||+||+|+||+++|+  ...     .+.....+....|.++ +.+|
T Consensus       170 ~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~--~~~-----~~~~~~~~~~~~p~~r~~~~~  242 (276)
T 1mxh_A          170 AMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP--PAM-----PQETQEEYRRKVPLGQSEASA  242 (276)
T ss_dssp             GGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC--SSS-----CHHHHHHHHTTCTTTSCCBCH
T ss_pred             hhhcCCCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC--ccC-----CHHHHHHHHhcCCCCCCCCCH
Confidence            9999999999999999999999999999999999999999999999999  221     1223445556678888 9999


Q ss_pred             HHHHHHHHHHhCCCCCCccccEEEeCCCcee
Q 024994          217 DEVSSLVAFLCLPAASYITGQIICVDGGVTV  247 (259)
Q Consensus       217 ~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~  247 (259)
                      +|++++++|++++.+.+++|++|.+|||.++
T Consensus       243 ~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~  273 (276)
T 1mxh_A          243 AQIADAIAFLVSKDAGYITGTTLKVDGGLIL  273 (276)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHHhCccccCccCcEEEECCchhc
Confidence            9999999999998889999999999999764

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=6.7e-48  Score=321.09  Aligned_cols=242  Identities=23%  Similarity=0.272  Sum_probs=210.5

Q ss_pred             CEEEEEcCc--chHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGT--RGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s--~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||+  +|||++++++|+++|++|++++|+....+. .+++......+.++++|++|.++++++++++.+.+ ++
T Consensus        15 k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~   92 (271)
T 3ek2_A           15 KRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDR-ITEFAAEFGSELVFPCDVADDAQIDALFASLKTHW-DS   92 (271)
T ss_dssp             CEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHC-SC
T ss_pred             CEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHH-HHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHc-CC
Confidence            799999998  999999999999999999999998654443 33443333468899999999999999999999999 79


Q ss_pred             ccEEEEcCCCCCC----CCCCC-CCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhh
Q 024994           79 LNILINNAAIAFV----KPTVD-ITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAY  153 (259)
Q Consensus        79 id~vi~~ag~~~~----~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  153 (259)
                      +|+||||||+...    .++.+ .+.++|++++++|+.+++.++++++|+|.+  .++||++||..+..+.++...|++|
T Consensus        93 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~as  170 (271)
T 3ek2_A           93 LDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD--DASLLTLSYLGAERAIPNYNTMGLA  170 (271)
T ss_dssp             EEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTTTHHHHH
T ss_pred             CCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc--CceEEEEeccccccCCCCccchhHH
Confidence            9999999998764    55665 899999999999999999999999999974  5899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 024994          154 KGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASY  233 (259)
Q Consensus       154 K~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  233 (259)
                      |+++++|+++++.|++++||+||+|+||+++|++......   .+...+.+....|.+++.+|+|++++++|++++.+.+
T Consensus       171 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~~~~~~~~pedva~~i~~l~s~~~~~  247 (271)
T 3ek2_A          171 KAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKS---FGKILDFVESNSPLKRNVTIEQVGNAGAFLLSDLASG  247 (271)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHH---HHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccc---hHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCcccCC
Confidence            9999999999999999999999999999999998765432   1235667778899999999999999999999998899


Q ss_pred             ccccEEEeCCCceeee
Q 024994          234 ITGQIICVDGGVTVTV  249 (259)
Q Consensus       234 ~~G~~l~~dgG~~~~~  249 (259)
                      +||++|++|||.+++.
T Consensus       248 ~tG~~i~vdgG~~~~~  263 (271)
T 3ek2_A          248 VTAEVMHVDSGFNAVV  263 (271)
T ss_dssp             CCSEEEEESTTGGGBC
T ss_pred             eeeeEEEECCCeeeeh
Confidence            9999999999998764

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=2.7e-47  Score=316.96  Aligned_cols=245  Identities=22%  Similarity=0.291  Sum_probs=218.6

Q ss_pred             CEEEEEcCc--chHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024994            1 MTALVTGGT--RGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF-KVTGSVCDLSSREQREKLIETVTSIFQG   77 (259)
Q Consensus         1 k~~lItG~s--~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (259)
                      |++|||||+  +|||+++|++|+++|++|++++|+....+...+.....+. ++.++++|++|.++++++++++.+.+ +
T Consensus         8 k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g   86 (266)
T 3oig_A            8 RNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQV-G   86 (266)
T ss_dssp             CEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHH-S
T ss_pred             CEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHh-C
Confidence            789999999  6699999999999999999999997665555444444443 79999999999999999999999999 7


Q ss_pred             CccEEEEcCCCCC----CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhh
Q 024994           78 KLNILINNAAIAF----VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAY  153 (259)
Q Consensus        78 ~id~vi~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  153 (259)
                      ++|+||||||...    ..++.+.+.++|++++++|+.+++.++++++|+|++  .++||++||..+..+.++...|++|
T Consensus        87 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~as  164 (266)
T 3oig_A           87 VIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE--GGSIVTLTYLGGELVMPNYNVMGVA  164 (266)
T ss_dssp             CCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGTSCCTTTHHHHHH
T ss_pred             CeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC--CceEEEEecccccccCCCcchhHHH
Confidence            9999999999876    467788899999999999999999999999999964  5899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 024994          154 KGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASY  233 (259)
Q Consensus       154 K~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  233 (259)
                      |+++++|+++++.|++++||+||+|+||+++|++......   .......+....|.+++.+|+|++++++|++++.+.+
T Consensus       165 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~~~~~~~~p~dva~~v~~l~s~~~~~  241 (266)
T 3oig_A          165 KASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISD---FNSILKDIEERAPLRRTTTPEEVGDTAAFLFSDMSRG  241 (266)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTT---HHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccc---hHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCchhc
Confidence            9999999999999999999999999999999998765432   2345667778889999999999999999999998899


Q ss_pred             ccccEEEeCCCceeeecc
Q 024994          234 ITGQIICVDGGVTVTVNV  251 (259)
Q Consensus       234 ~~G~~l~~dgG~~~~~~~  251 (259)
                      ++|+.|.+|||++.....
T Consensus       242 ~tG~~i~vdGG~~~~~~~  259 (266)
T 3oig_A          242 ITGENLHVDSGFHITARL  259 (266)
T ss_dssp             CCSCEEEESTTGGGCCCC
T ss_pred             CcCCEEEECCCeEEeeec
Confidence            999999999998876543

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=3.6e-47  Score=318.14  Aligned_cols=247  Identities=28%  Similarity=0.444  Sum_probs=205.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHH---HhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEW---KNKGFKVTGSVCDLSSREQREKLIETVTSIFQG   77 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++   ...+.++.++++|++|.++++++++++.+.+ +
T Consensus         7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g   85 (278)
T 1spx_A            7 KVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF-G   85 (278)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH-S
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHc-C
Confidence            68999999999999999999999999999999999888877777   3334578999999999999999999999999 7


Q ss_pred             CccEEEEcCCCCCCCCCCCC----CHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCc-cCCCCCChhhhh
Q 024994           78 KLNILINNAAIAFVKPTVDI----TAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG-VRGIPSVSLYGA  152 (259)
Q Consensus        78 ~id~vi~~ag~~~~~~~~~~----~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~-~~~~~~~~~Y~~  152 (259)
                      ++|+||||||.....++.+.    +.++|++++++|+.+++.++++++|.|.+++ ++||++||..+ ..+.++...|++
T Consensus        86 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~~Y~~  164 (278)
T 1spx_A           86 KLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFPYYSI  164 (278)
T ss_dssp             CCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTSHHHHH
T ss_pred             CCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCCCCccHHHH
Confidence            99999999998776777777    9999999999999999999999999998765 99999999998 888899999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcC-CCCc---hHHHHhhhhcCCCCCCCCHHHHHHHHHHHhC
Q 024994          153 YKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE-GPEG---SEFLDGIARQTPIGRAGEPDEVSSLVAFLCL  228 (259)
Q Consensus       153 sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  228 (259)
                      ||+++++|+++++.|++++||++|+|+||+++|++...... ....   ......+....|.+++.+|+|++++++|+++
T Consensus       165 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s  244 (278)
T 1spx_A          165 AKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFLAD  244 (278)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCCCcCCCCHHHHHHHHHHHcC
Confidence            99999999999999999999999999999999998754211 1110   0113444556788999999999999999998


Q ss_pred             CCCCC-ccccEEEeCCCceeee
Q 024994          229 PAASY-ITGQIICVDGGVTVTV  249 (259)
Q Consensus       229 ~~~~~-~~G~~l~~dgG~~~~~  249 (259)
                      +...+ ++|+++.+|||..++.
T Consensus       245 ~~~~~~~tG~~~~vdgG~~~~~  266 (278)
T 1spx_A          245 RKTSSYIIGHQLVVDGGSSLIM  266 (278)
T ss_dssp             HHHHTTCCSCEEEESTTGGGC-
T ss_pred             ccccCcccCcEEEECCCccccc
Confidence            76676 9999999999987654

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=2.1e-47  Score=317.16  Aligned_cols=243  Identities=33%  Similarity=0.427  Sum_probs=214.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++.   .++.++++|++|.++++++++++.+.+ +++|
T Consensus        13 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~d~~~v~~~~~~~~~~~-g~iD   88 (263)
T 3ak4_A           13 RKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE---NGGFAVEVDVTKRASVDAAMQKAIDAL-GGFD   88 (263)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCT---TCCEEEECCTTCHHHHHHHHHHHHHHH-TCCC
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh---cCCeEEEEeCCCHHHHHHHHHHHHHHc-CCCC
Confidence            689999999999999999999999999999999988776655442   267888999999999999999999999 7899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.++++++|.|.+++ .++||++||..+..+.++...|++||+++++
T Consensus        89 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~  168 (263)
T 3ak4_A           89 LLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFG  168 (263)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCCchhHHHHHHHHHH
Confidence            999999988777888899999999999999999999999999998876 6999999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCc-----C-CCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE-----E-GPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASY  233 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  233 (259)
                      |+++++.|++++||++|+|+||+++|++.....     . ....+.....+....|.+++.+|+|++++++|++++.+.+
T Consensus       169 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~~~~  248 (263)
T 3ak4_A          169 WTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVFLASDAARF  248 (263)
T ss_dssp             HHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccC
Confidence            999999999999999999999999999854321     0 0011223344556678899999999999999999988889


Q ss_pred             ccccEEEeCCCcee
Q 024994          234 ITGQIICVDGGVTV  247 (259)
Q Consensus       234 ~~G~~l~~dgG~~~  247 (259)
                      ++|+.|++|||..+
T Consensus       249 ~tG~~~~vdgG~~~  262 (263)
T 3ak4_A          249 MTGQGINVTGGVRM  262 (263)
T ss_dssp             CCSCEEEESSSSSC
T ss_pred             CCCCEEEECcCEeC
Confidence            99999999999764

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=2.2e-47  Score=320.55  Aligned_cols=233  Identities=18%  Similarity=0.240  Sum_probs=212.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChh-------HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI-------ELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTS   73 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~-------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   73 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+       .+++..+++...+.++.++++|++|.++++++++++.+
T Consensus        10 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   89 (285)
T 3sc4_A           10 KTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKTVE   89 (285)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            78999999999999999999999999999999887       46666777776677899999999999999999999999


Q ss_pred             HcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCC-CCChhhhh
Q 024994           74 IFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI-PSVSLYGA  152 (259)
Q Consensus        74 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~-~~~~~Y~~  152 (259)
                      .+ +++|+||||||+....++.+.+.++|++++++|+.+++.++++++|+|++++.++||++||..+..+. ++...|++
T Consensus        90 ~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~a  168 (285)
T 3sc4_A           90 QF-GGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPYMM  168 (285)
T ss_dssp             HH-SCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGGSCSHHHHH
T ss_pred             Hc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCCCCCchHHH
Confidence            99 79999999999988888999999999999999999999999999999998888999999999998886 78899999


Q ss_pred             hHHHHHHHHHHHHHHHccCCceEEEEeCC-ceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCC
Q 024994          153 YKGAMNQLTKNLACEWAKDNIRTNTVAPW-VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAA  231 (259)
Q Consensus       153 sK~a~~~~~~~~a~e~~~~gi~v~~v~pg-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  231 (259)
                      ||+++++|+++++.|++++||+||+|+|| .+.|++...            ......+.+++.+|+|++++++|++++.+
T Consensus       169 sKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~------------~~~~~~~~~r~~~pedvA~~~~~l~s~~~  236 (285)
T 3sc4_A          169 AKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQN------------LLGGDEAMARSRKPEVYADAAYVVLNKPS  236 (285)
T ss_dssp             HHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHH------------HHTSCCCCTTCBCTHHHHHHHHHHHTSCT
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHh------------hccccccccCCCCHHHHHHHHHHHhCCcc
Confidence            99999999999999999999999999999 688876432            22334578899999999999999999888


Q ss_pred             CCccccEEEeCCCcee
Q 024994          232 SYITGQIICVDGGVTV  247 (259)
Q Consensus       232 ~~~~G~~l~~dgG~~~  247 (259)
                       ++||+.+.+|||...
T Consensus       237 -~~tG~~i~~dgg~~~  251 (285)
T 3sc4_A          237 -SYTGNTLLCEDVLLE  251 (285)
T ss_dssp             -TCCSCEEEHHHHHHH
T ss_pred             -cccceEEEEcCchhc
Confidence             999999999998664

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=5.9e-47  Score=317.67  Aligned_cols=243  Identities=28%  Similarity=0.420  Sum_probs=213.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhH-HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE-LDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+. .+...+++...+.++.++.+|++|.++++++++++.+.+ +++
T Consensus        30 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~i  108 (283)
T 1g0o_A           30 KVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF-GKL  108 (283)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-SCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHc-CCC
Confidence            689999999999999999999999999999998754 455566666667789999999999999999999999999 799


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCC-ChhhhhhHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPS-VSLYGAYKGAMN  158 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~-~~~Y~~sK~a~~  158 (259)
                      |+||||||.....++.+.+.++|++++++|+.+++.++++++|+|  .+.++||++||..+..+.++ ...|++||++++
T Consensus       109 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~--~~~g~iv~isS~~~~~~~~~~~~~Y~asK~a~~  186 (283)
T 1g0o_A          109 DIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHL--EIGGRLILMGSITGQAKAVPKHAVYSGSKGAIE  186 (283)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHS--CTTCEEEEECCGGGTCSSCSSCHHHHHHHHHHH
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH--hcCCeEEEEechhhccCCCCCCcchHHHHHHHH
Confidence            999999999877788889999999999999999999999999999  34689999999999887764 899999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCc----CCC--CchHHHHhhhh--cCCCCCCCCHHHHHHHHHHHhCCC
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE----EGP--EGSEFLDGIAR--QTPIGRAGEPDEVSSLVAFLCLPA  230 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~----~~~--~~~~~~~~~~~--~~~~~~~~~~~~va~~~~~l~~~~  230 (259)
                      +|+++++.|++++||+||+|+||+++|++.....    ...  ......+.+..  ..|.+|+++|+|++++++||+++.
T Consensus       187 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~  266 (283)
T 1g0o_A          187 TFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLASND  266 (283)
T ss_dssp             HHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCCCCCcCHHHHHHHHHHHhCcc
Confidence            9999999999999999999999999999754321    100  01223444555  689999999999999999999998


Q ss_pred             CCCccccEEEeCCCce
Q 024994          231 ASYITGQIICVDGGVT  246 (259)
Q Consensus       231 ~~~~~G~~l~~dgG~~  246 (259)
                      +.++||++|.+|||.+
T Consensus       267 ~~~itG~~i~vdgG~~  282 (283)
T 1g0o_A          267 GGWVTGKVIGIDGGAC  282 (283)
T ss_dssp             GTTCCSCEEEESTTCC
T ss_pred             ccCcCCCEEEeCCCcc
Confidence            8999999999999975

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-47  Score=316.39  Aligned_cols=238  Identities=30%  Similarity=0.322  Sum_probs=213.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++   +.++.++++|++|.++++++++++.+.+ +++|
T Consensus         7 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~id   82 (253)
T 1hxh_A            7 KVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRL-GTLN   82 (253)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHH-CSCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence            78999999999999999999999999999999998887776665   4578999999999999999999999999 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.++++++|.|.+++ ++||++||..+..+.++...|++||+++++|
T Consensus        83 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  161 (253)
T 1hxh_A           83 VLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAAVSAL  161 (253)
T ss_dssp             EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCCCCCccHHHHHHHHHHH
Confidence            999999998777888999999999999999999999999999998876 9999999999999999999999999999999


Q ss_pred             HHHHHHHHccC--CceEEEEeCCceeCCCCCCCcCCCCchHHHHh-hhh---cCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 024994          161 TKNLACEWAKD--NIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDG-IAR---QTPIGRAGEPDEVSSLVAFLCLPAASYI  234 (259)
Q Consensus       161 ~~~~a~e~~~~--gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~va~~~~~l~~~~~~~~  234 (259)
                      +++++.|++++  ||++|+|+||+++|++.........    ... +..   ..|.+++.+|+|++++++|++++.++++
T Consensus       162 ~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~----~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~  237 (253)
T 1hxh_A          162 TRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGV----SKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVM  237 (253)
T ss_dssp             HHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTC----CHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhh----hHHHHhhhhccCccCCCCCHHHHHHHHHHHcCccccCC
Confidence            99999999988  9999999999999998643211111    111 333   5678899999999999999999888999


Q ss_pred             cccEEEeCCCcee
Q 024994          235 TGQIICVDGGVTV  247 (259)
Q Consensus       235 ~G~~l~~dgG~~~  247 (259)
                      +|+.+.+|||...
T Consensus       238 tG~~~~vdgG~~~  250 (253)
T 1hxh_A          238 SGSELHADNSILG  250 (253)
T ss_dssp             CSCEEEESSSCTT
T ss_pred             CCcEEEECCCccc
Confidence            9999999999754

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.4e-47  Score=316.28  Aligned_cols=228  Identities=31%  Similarity=0.444  Sum_probs=206.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+..+         ..++.++++|++|.++++++++++.+.+ +++|
T Consensus        29 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD   98 (260)
T 3un1_A           29 KVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA---------DPDIHTVAGDISKPETADRIVREGIERF-GRID   98 (260)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS---------STTEEEEESCTTSHHHHHHHHHHHHHHH-SCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc---------cCceEEEEccCCCHHHHHHHHHHHHHHC-CCCC
Confidence            68999999999999999999999999999999876432         2368899999999999999999999999 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCC--CCCChhhhhhHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG--IPSVSLYGAYKGAMN  158 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~--~~~~~~Y~~sK~a~~  158 (259)
                      +||||||+....++.+.+.++|++++++|+.+++.++++++|.|.+++.++||++||..+..+  .++...|++||++++
T Consensus        99 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sKaa~~  178 (260)
T 3un1_A           99 SLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASLTKGGLN  178 (260)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTCCCHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCCccHHHHHHHHHHH
Confidence            999999998888888999999999999999999999999999999888899999999887643  456689999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI  238 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~  238 (259)
                      +|+++++.|++++||+||+|+||+++|++...        .....+....|.+++++|+|++++++||  +.+.+++|++
T Consensus       179 ~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~--------~~~~~~~~~~p~~r~~~~~dva~av~~L--~~~~~itG~~  248 (260)
T 3un1_A          179 AVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPA--------ETHSTLAGLHPVGRMGEIRDVVDAVLYL--EHAGFITGEI  248 (260)
T ss_dssp             HHHHHHHHHTTTTTEEEEEEEECCBCCTTSCG--------GGHHHHHTTSTTSSCBCHHHHHHHHHHH--HHCTTCCSCE
T ss_pred             HHHHHHHHHhCcCCeEEEEEeecCCCCCCCCH--------HHHHHHhccCCCCCCcCHHHHHHHHHHh--cccCCCCCcE
Confidence            99999999999999999999999999998642        1345566778999999999999999999  4678999999


Q ss_pred             EEeCCCceee
Q 024994          239 ICVDGGVTVT  248 (259)
Q Consensus       239 l~~dgG~~~~  248 (259)
                      |++|||..++
T Consensus       249 i~vdGG~~~~  258 (260)
T 3un1_A          249 LHVDGGQNAG  258 (260)
T ss_dssp             EEESTTGGGC
T ss_pred             EEECCCeecc
Confidence            9999998764

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=6.5e-48  Score=319.19  Aligned_cols=233  Identities=24%  Similarity=0.362  Sum_probs=200.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+...+   +   .+.++.++++|++|.++++++++.+.+ + +++|
T Consensus        10 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~---~---~~~~~~~~~~D~~~~~~v~~~~~~~~~-~-g~id   81 (257)
T 3tl3_A           10 AVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVA---D---LGDRARFAAADVTDEAAVASALDLAET-M-GTLR   81 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHH---H---TCTTEEEEECCTTCHHHHHHHHHHHHH-H-SCEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHH---h---cCCceEEEECCCCCHHHHHHHHHHHHH-h-CCCC
Confidence            789999999999999999999999999999996654322   2   256899999999999999999998877 7 7999


Q ss_pred             EEEEcCCCCCCC----CCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHh--------CCCCEEEEecCCCccCCCCCCh
Q 024994           81 ILINNAAIAFVK----PTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKA--------SGNGSIVFISSVGGVRGIPSVS  148 (259)
Q Consensus        81 ~vi~~ag~~~~~----~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--------~~~~~ii~isS~~~~~~~~~~~  148 (259)
                      +||||||.....    +..+.+.++|++++++|+.+++.++++++|+|.+        ++.++||++||..+..+.+++.
T Consensus        82 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  161 (257)
T 3tl3_A           82 IVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQA  161 (257)
T ss_dssp             EEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCHHHHH
T ss_pred             EEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCCCCCc
Confidence            999999986433    2335789999999999999999999999999987        5678999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCC-CCCCCHHHHHHHHHHHh
Q 024994          149 LYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPI-GRAGEPDEVSSLVAFLC  227 (259)
Q Consensus       149 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~  227 (259)
                      .|++||+++++|+++++.|++++||+||+|+||+++|++.....     +.....+....|. +|+.+|+|++++++||+
T Consensus       162 ~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-----~~~~~~~~~~~~~~~r~~~p~dva~~v~~l~  236 (257)
T 3tl3_A          162 AYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLP-----EEARASLGKQVPHPSRLGNPDEYGALAVHII  236 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---C-----HHHHHHHHHTSSSSCSCBCHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhcc-----HHHHHHHHhcCCCCCCccCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999986532     2245566667777 99999999999999999


Q ss_pred             CCCCCCccccEEEeCCCceee
Q 024994          228 LPAASYITGQIICVDGGVTVT  248 (259)
Q Consensus       228 ~~~~~~~~G~~l~~dgG~~~~  248 (259)
                      ++  .++||+.|.+|||.++.
T Consensus       237 s~--~~itG~~i~vdGG~~~~  255 (257)
T 3tl3_A          237 EN--PMLNGEVIRLDGAIRMA  255 (257)
T ss_dssp             HC--TTCCSCEEEESTTC---
T ss_pred             cC--CCCCCCEEEECCCccCC
Confidence            86  79999999999998875

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=2.3e-47  Score=316.85  Aligned_cols=236  Identities=29%  Similarity=0.428  Sum_probs=209.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++   ..++.++++|++|.++++++++++.+.+ +++|
T Consensus         7 k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~iD   82 (263)
T 2a4k_A            7 KTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL---EAEAIAVVADVSDPKAVEAVFAEALEEF-GRLH   82 (263)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC---CSSEEEEECCTTSHHHHHHHHHHHHHHH-SCCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cCceEEEEcCCCCHHHHHHHHHHHHHHc-CCCc
Confidence            68999999999999999999999999999999998877765544   3478899999999999999999999999 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.++++++|+| ++ .++||++||..+. +.++...|++||+++++|
T Consensus        83 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~-~g~iv~isS~~~~-~~~~~~~Y~asK~a~~~~  159 (263)
T 2a4k_A           83 GVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE-GGSLVLTGSVAGL-GAFGLAHYAAGKLGVVGL  159 (263)
T ss_dssp             EEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT-TCEEEEECCCTTC-CHHHHHHHHHCSSHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc-CCEEEEEecchhc-CCCCcHHHHHHHHHHHHH
Confidence            99999999877788889999999999999999999999999999 54 7999999999998 778889999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC  240 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~  240 (259)
                      +++++.|++++||+||+|+||+++|++.....     +.....+....|.+++.+|+|++++++|++++.+.+++|+.+.
T Consensus       160 ~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-----~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~  234 (263)
T 2a4k_A          160 ARTLALELARKGVRVNVLLPGLIQTPMTAGLP-----PWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQALY  234 (263)
T ss_dssp             HHHHHHHHTTTTCEEEEEEECSBCCGGGTTSC-----HHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHhhhhCcEEEEEEeCcCcCchhhhcC-----HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCCEEE
Confidence            99999999999999999999999999876431     2234455667788999999999999999999888999999999


Q ss_pred             eCCCceee
Q 024994          241 VDGGVTVT  248 (259)
Q Consensus       241 ~dgG~~~~  248 (259)
                      +|||..+.
T Consensus       235 vdgG~~~~  242 (263)
T 2a4k_A          235 VDGGRSIV  242 (263)
T ss_dssp             ESTTTTTC
T ss_pred             ECCCcccc
Confidence            99998764

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=2.6e-47  Score=319.38  Aligned_cols=242  Identities=24%  Similarity=0.304  Sum_probs=215.4

Q ss_pred             CEEEEEcCc--chHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGT--RGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s--~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||+  +|||+++|++|+++|++|++++|+.  .++..+++.....++.++++|++|.++++++++++.+.+ ++
T Consensus        27 k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g~  103 (280)
T 3nrc_A           27 KKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVW-DG  103 (280)
T ss_dssp             CEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHC-SS
T ss_pred             CEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHc-CC
Confidence            789999988  7799999999999999999999988  334444554444568899999999999999999999999 79


Q ss_pred             ccEEEEcCCCCCC----CCCCC-CCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhh
Q 024994           79 LNILINNAAIAFV----KPTVD-ITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAY  153 (259)
Q Consensus        79 id~vi~~ag~~~~----~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  153 (259)
                      +|+||||||+...    .++.+ .+.++|++++++|+.+++.++++++|+|.++ .++||++||..+..+.++...|++|
T Consensus       104 id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~as  182 (280)
T 3nrc_A          104 LDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR-NASMVALTYIGAEKAMPSYNTMGVA  182 (280)
T ss_dssp             CCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-TCEEEEEECGGGTSCCTTTHHHHHH
T ss_pred             CCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEEEeccccccCCCCchhhHHH
Confidence            9999999998754    44445 8899999999999999999999999999766 6999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 024994          154 KGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASY  233 (259)
Q Consensus       154 K~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  233 (259)
                      |+++++|+++++.|++++||+||+|+||+++|++......   .....+.+....|.+++.+|+|++++++||+++.+.+
T Consensus       183 Kaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~p~~~~~~pedvA~~v~~l~s~~~~~  259 (280)
T 3nrc_A          183 KASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISN---FKKMLDYNAMVSPLKKNVDIMEVGNTVAFLCSDMATG  259 (280)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTT---HHHHHHHHHHHSTTCSCCCHHHHHHHHHHTTSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcc---hHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccCC
Confidence            9999999999999999999999999999999998765432   2346677778899999999999999999999998999


Q ss_pred             ccccEEEeCCCceeee
Q 024994          234 ITGQIICVDGGVTVTV  249 (259)
Q Consensus       234 ~~G~~l~~dgG~~~~~  249 (259)
                      ++|++|.+|||.++..
T Consensus       260 ~tG~~i~vdgG~~~~~  275 (280)
T 3nrc_A          260 ITGEVVHVDAGYHCVS  275 (280)
T ss_dssp             CCSCEEEESTTGGGCC
T ss_pred             cCCcEEEECCCccccC
Confidence            9999999999998753

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=6.4e-47  Score=315.73  Aligned_cols=240  Identities=30%  Similarity=0.391  Sum_probs=206.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEe-eCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTC-SRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||++|||+++|++|+++|++|+++ .|+.+.++...+++...+.++.++.+|++|.++++++++++.+.+ +++
T Consensus        27 k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g~i  105 (272)
T 4e3z_A           27 PVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQF-GRL  105 (272)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH-SCC
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhC-CCC
Confidence            689999999999999999999999999876 788888888888888777899999999999999999999999999 799


Q ss_pred             cEEEEcCCCCCC-CCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC---CCCEEEEecCCCccCCCC-CChhhhhhH
Q 024994           80 NILINNAAIAFV-KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS---GNGSIVFISSVGGVRGIP-SVSLYGAYK  154 (259)
Q Consensus        80 d~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~~~ii~isS~~~~~~~~-~~~~Y~~sK  154 (259)
                      |+||||||.... .++.+.+.++|++++++|+.+++.+++.++|.|.+.   +.++||++||..+..+.+ .+..|++||
T Consensus       106 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK  185 (272)
T 4e3z_A          106 DGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAASK  185 (272)
T ss_dssp             CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTTCHHHHHHH
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCCcchhHHHH
Confidence            999999998764 678889999999999999999999999999999763   468999999999988776 678899999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 024994          155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYI  234 (259)
Q Consensus       155 ~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~  234 (259)
                      +++++|+++++.|++++||+|++|+||+++|++......    ...........|.+++.+|+|++++++|++++.+.++
T Consensus       186 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~edvA~~i~~l~s~~~~~~  261 (272)
T 4e3z_A          186 AAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGL----PDRAREMAPSVPMQRAGMPEEVADAILYLLSPSASYV  261 (272)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBC----------------------CCTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCC----hHHHHHHhhcCCcCCCcCHHHHHHHHHHHhCCccccc
Confidence            999999999999999999999999999999998754221    1134455667889999999999999999999989999


Q ss_pred             cccEEEeCCCc
Q 024994          235 TGQIICVDGGV  245 (259)
Q Consensus       235 ~G~~l~~dgG~  245 (259)
                      +|++|++|||.
T Consensus       262 tG~~i~vdgG~  272 (272)
T 4e3z_A          262 TGSILNVSGGR  272 (272)
T ss_dssp             CSCEEEESTTC
T ss_pred             cCCEEeecCCC
Confidence            99999999995

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.2e-47  Score=322.31  Aligned_cols=243  Identities=24%  Similarity=0.318  Sum_probs=214.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC---EEEEeeCChhHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA---IVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTSIF   75 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (259)
                      |++|||||++|||+++|++|+++|+   +|++++|+.+.++++.+++...  +.++.++++|++|.++++++++++.+.+
T Consensus        34 k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  113 (287)
T 3rku_A           34 KTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEF  113 (287)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCGGG
T ss_pred             CEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            7899999999999999999999998   9999999999999888888654  5689999999999999999999999999


Q ss_pred             CCCccEEEEcCCCCC-CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhH
Q 024994           76 QGKLNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYK  154 (259)
Q Consensus        76 ~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  154 (259)
                       +++|+||||||... ..++.+.+.++|++++++|+.+++.++++++|+|++++.++||++||..+..+.++...|++||
T Consensus       114 -g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asK  192 (287)
T 3rku_A          114 -KDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASK  192 (287)
T ss_dssp             -CSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             -CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCCCCchHHHHH
Confidence             79999999999875 5678889999999999999999999999999999988889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 024994          155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYI  234 (259)
Q Consensus       155 ~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~  234 (259)
                      +++++|+++++.|++++||+||+|+||+++|++....... ..+.....+...    ...+|+|++++++|++++.+.++
T Consensus       193 aa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~----~p~~pedvA~~v~~l~s~~~~~i  267 (287)
T 3rku_A          193 FAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRG-NEEQAKNVYKDT----TPLMADDVADLIVYATSRKQNTV  267 (287)
T ss_dssp             HHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTT-CHHHHHHHHTTS----CCEEHHHHHHHHHHHHTSCTTEE
T ss_pred             HHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccC-cHHHHHHhhccc----CCCCHHHHHHHHHHHhCCCCCeE
Confidence            9999999999999999999999999999999985322111 111122222222    23489999999999999999999


Q ss_pred             cccEEEeCCCceeee
Q 024994          235 TGQIICVDGGVTVTV  249 (259)
Q Consensus       235 ~G~~l~~dgG~~~~~  249 (259)
                      +|+++.+|+|.....
T Consensus       268 ~g~~i~v~~g~~~p~  282 (287)
T 3rku_A          268 IADTLIFPTNQASPH  282 (287)
T ss_dssp             EEEEEEEETTEEETT
T ss_pred             ecceEEeeCCCCCCc
Confidence            999999999987643

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=7.5e-47  Score=313.76  Aligned_cols=240  Identities=22%  Similarity=0.326  Sum_probs=203.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++...+.++.++.+|++|.++++++++++.+.+ +++|
T Consensus         5 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD   83 (264)
T 3tfo_A            5 KVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTW-GRID   83 (264)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-CCCC
Confidence            789999999999999999999999999999999999999999988878889999999999999999999999999 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||+....++.+.+.++|++++++|+.+++.++++++|.|.+++.|+||++||..+..+.++...|++||+++++|
T Consensus        84 ~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l  163 (264)
T 3tfo_A           84 VLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAI  163 (264)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCChhHHHHHHHHHHH
Confidence            99999999888888999999999999999999999999999999988789999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC  240 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~  240 (259)
                      +++++.|+ + |||||+|+||+++|++..........    ...  ........+|+|++++++|++++...+.+|+++.
T Consensus       164 ~~~la~e~-~-gIrvn~v~PG~v~T~~~~~~~~~~~~----~~~--~~~~~~~~~pedvA~~v~~l~s~~~~~~~~~i~i  235 (264)
T 3tfo_A          164 SDGLRQES-T-NIRVTCVNPGVVESELAGTITHEETM----AAM--DTYRAIALQPADIARAVRQVIEAPQSVDTTEITI  235 (264)
T ss_dssp             HHHHHHHC-S-SEEEEEEEECCC-----------------------------CCCHHHHHHHHHHHHHSCTTEEEEEEEE
T ss_pred             HHHHHHhC-C-CCEEEEEecCCCcCcccccccchhHH----HHH--HhhhccCCCHHHHHHHHHHHhcCCccCccceEEE
Confidence            99999998 5 99999999999999998654322110    000  0111235789999999999999999999999999


Q ss_pred             eCCCceeee
Q 024994          241 VDGGVTVTV  249 (259)
Q Consensus       241 ~dgG~~~~~  249 (259)
                      .++|+.+..
T Consensus       236 ~p~~~~~~~  244 (264)
T 3tfo_A          236 RPTASGNAE  244 (264)
T ss_dssp             EECC-----
T ss_pred             ecCcccccc
Confidence            999987643

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=7.2e-47  Score=311.70  Aligned_cols=233  Identities=27%  Similarity=0.349  Sum_probs=192.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+.        .. . .+.++.+|++|.++++++++++.+.+ +++|
T Consensus         8 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~--------~~-~-~~~~~~~D~~d~~~~~~~~~~~~~~~-g~id   76 (250)
T 2fwm_X            8 KNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ--------EQ-Y-PFATEVMDVADAAQVAQVCQRLLAET-ERLD   76 (250)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS--------SC-C-SSEEEECCTTCHHHHHHHHHHHHHHC-SCCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh--------hc-C-CceEEEcCCCCHHHHHHHHHHHHHHc-CCCC
Confidence            689999999999999999999999999999998752        11 1 27788999999999999999999999 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.++++++|+|++++.++||++||..+..+.++...|++||+++++|
T Consensus        77 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  156 (250)
T 2fwm_X           77 ALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSL  156 (250)
T ss_dssp             EEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCCchHHHHHHHHHHH
Confidence            99999999877788889999999999999999999999999999887789999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHH-hhhh-------cCCCCCCCCHHHHHHHHHHHhCCCCC
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLD-GIAR-------QTPIGRAGEPDEVSSLVAFLCLPAAS  232 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~-~~~~-------~~~~~~~~~~~~va~~~~~l~~~~~~  232 (259)
                      +++++.|++++||++|+|+||+++|++.........   ..+ .+..       ..|.+++.+|+|++++++|++++.+.
T Consensus       157 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~  233 (250)
T 2fwm_X          157 ALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDD---AEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLASDLAS  233 (250)
T ss_dssp             HHHHHHHHGGGTCEEEEEEECCC---------------------------------------CHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHhCccCCEEEEEECCcccCccccccccChh---HHHHHHhhhhhcccccCCCCCCcCHHHHHHHHHHHhCcccc
Confidence            999999999999999999999999998754321111   111 2222       56788999999999999999998889


Q ss_pred             CccccEEEeCCCcee
Q 024994          233 YITGQIICVDGGVTV  247 (259)
Q Consensus       233 ~~~G~~l~~dgG~~~  247 (259)
                      +++|+.+.+|||.++
T Consensus       234 ~~tG~~i~vdGG~~~  248 (250)
T 2fwm_X          234 HITLQDIVVDGGSTL  248 (250)
T ss_dssp             TCCSCEEEESTTTTT
T ss_pred             CCCCCEEEECCCccc
Confidence            999999999999764

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=3e-46  Score=309.77  Aligned_cols=234  Identities=33%  Similarity=0.427  Sum_probs=212.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++..   ++.++++|++|.++++++++++.+.+ +++|
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~~-g~iD   83 (260)
T 1nff_A            8 KVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD---AARYVHLDVTQPAQWKAAVDTAVTAF-GGLH   83 (260)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGG---GEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc---CceEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence            6899999999999999999999999999999999888776665532   58889999999999999999999999 7899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.++++++|.|.+++.++||++||..+..+.++...|++||+++++|
T Consensus        84 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  163 (260)
T 1nff_A           84 VLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGL  163 (260)
T ss_dssp             EEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCCchhHHHHHHHHHHH
Confidence            99999999877788889999999999999999999999999999887789999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC  240 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~  240 (259)
                      +++++.|++++||++|+|+||+++|++.. .. ..       .+. ..|.+++.+|+|++++++|++++.+.+++|+.+.
T Consensus       164 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-~~-~~-------~~~-~~~~~~~~~~~dvA~~v~~l~s~~~~~~~G~~~~  233 (260)
T 1nff_A          164 TKSTALELGPSGIRVNSIHPGLVKTPMTD-WV-PE-------DIF-QTALGRAAEPVEVSNLVVYLASDESSYSTGAEFV  233 (260)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECCBCSGGGT-TS-CT-------TCS-CCSSSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHhCccCcEEEEEEeCCCCCCccc-cc-hh-------hHH-hCccCCCCCHHHHHHHHHHHhCccccCCcCCEEE
Confidence            99999999999999999999999999864 21 11       111 4678899999999999999999888999999999


Q ss_pred             eCCCceee
Q 024994          241 VDGGVTVT  248 (259)
Q Consensus       241 ~dgG~~~~  248 (259)
                      +|||..+.
T Consensus       234 v~gG~~~~  241 (260)
T 1nff_A          234 VDGGTVAG  241 (260)
T ss_dssp             ESTTGGGS
T ss_pred             ECCCeecc
Confidence            99998764

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=3.3e-47  Score=317.83  Aligned_cols=234  Identities=22%  Similarity=0.306  Sum_probs=205.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhH-------HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE-------LDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTS   73 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   73 (259)
                      |++|||||++|||+++|++|+++|++|++++|+.++       +++..+++...+.++.++++|++|.++++++++++.+
T Consensus         7 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   86 (274)
T 3e03_A            7 KTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAATVD   86 (274)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence            799999999999999999999999999999998764       5666666666677899999999999999999999999


Q ss_pred             HcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCC--CCCChhhh
Q 024994           74 IFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG--IPSVSLYG  151 (259)
Q Consensus        74 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~--~~~~~~Y~  151 (259)
                      .+ +++|+||||||+....++.+.+.++|++++++|+.+++.++++++|+|++++.++||++||..+..+  .++...|+
T Consensus        87 ~~-g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~Y~  165 (274)
T 3e03_A           87 TF-GGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYT  165 (274)
T ss_dssp             HH-SCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHHHHHCHHHH
T ss_pred             Hc-CCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCCCCchHH
Confidence            99 7999999999998888888999999999999999999999999999999888899999999999887  67889999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEeCC-ceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 024994          152 AYKGAMNQLTKNLACEWAKDNIRTNTVAPW-VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPA  230 (259)
Q Consensus       152 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  230 (259)
                      +||+++++|+++++.|++++||+||+|+|| .++|++......              .+..+..+|+|++++++||+++.
T Consensus       166 asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~~~~--------------~~~~~~~~pedvA~~v~~l~s~~  231 (274)
T 3e03_A          166 LAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINMLPG--------------VDAAACRRPEIMADAAHAVLTRE  231 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-------C--------------CCGGGSBCTHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhhccc--------------ccccccCCHHHHHHHHHHHhCcc
Confidence            999999999999999999999999999999 689998733211              12335778999999999999999


Q ss_pred             CCCccccEEEeCCCceeeec
Q 024994          231 ASYITGQIICVDGGVTVTVN  250 (259)
Q Consensus       231 ~~~~~G~~l~~dgG~~~~~~  250 (259)
                      +.++||++| +|||......
T Consensus       232 ~~~itG~~i-~~~g~~~~~~  250 (274)
T 3e03_A          232 AAGFHGQFL-IDDEVLAQAG  250 (274)
T ss_dssp             CTTCCSCEE-EHHHHHHHTT
T ss_pred             ccccCCeEE-EcCcchhhcc
Confidence            999999999 8877655433

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=7.1e-47  Score=311.42  Aligned_cols=234  Identities=33%  Similarity=0.476  Sum_probs=196.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++.   .++.++.+|+++.+++++++++.     +++|
T Consensus        15 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~-----~~id   86 (249)
T 3f9i_A           15 KTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK---DNYTIEVCNLANKEECSNLISKT-----SNLD   86 (249)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---SSEEEEECCTTSHHHHHHHHHTC-----SCCS
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc---cCccEEEcCCCCHHHHHHHHHhc-----CCCC
Confidence            789999999999999999999999999999999999888776663   47889999999999988887654     6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.++++++|.|.+++.++||++||..+..+.++...|++||+++++|
T Consensus        87 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  166 (249)
T 3f9i_A           87 ILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGM  166 (249)
T ss_dssp             EEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSCSHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCCCchhHHHHHHHHHH
Confidence            99999999877777888999999999999999999999999999888789999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC  240 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~  240 (259)
                      +++++.|+.++||++|+|+||+++|++.....     ......+....|.+++.+|+|++++++|++++.+.+++|+.|+
T Consensus       167 ~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~  241 (249)
T 3f9i_A          167 TKSLSYEVATRGITVNAVAPGFIKSDMTDKLN-----EKQREAIVQKIPLGTYGIPEDVAYAVAFLASNNASYITGQTLH  241 (249)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECCBC------CC-----HHHHHHHHHHCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHHHHcCcEEEEEecCccccCcccccC-----HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCccCCccCcEEE
Confidence            99999999999999999999999999876542     2356667778899999999999999999999989999999999


Q ss_pred             eCCCcee
Q 024994          241 VDGGVTV  247 (259)
Q Consensus       241 ~dgG~~~  247 (259)
                      +|||..+
T Consensus       242 vdgG~~~  248 (249)
T 3f9i_A          242 VNGGMLM  248 (249)
T ss_dssp             ESTTSSC
T ss_pred             ECCCEee
Confidence            9999875

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=1.2e-46  Score=310.72  Aligned_cols=233  Identities=18%  Similarity=0.182  Sum_probs=196.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++...+.++.++++|++|.++++++++++.+.  +++|
T Consensus         8 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~--g~id   85 (252)
T 3h7a_A            8 ATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH--APLE   85 (252)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH--SCEE
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh--CCce
Confidence            68999999999999999999999999999999999999999998887889999999999999999999999887  5899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.++++++|+|.+++.++||++||..+..+.++...|++||+++++|
T Consensus        86 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l  165 (252)
T 3h7a_A           86 VTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKFGLRAV  165 (252)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTTCHHHHHHHHHHHHH
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCCCccHHHHHHHHHHH
Confidence            99999999888888899999999999999999999999999999988789999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceE-EEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          161 TKNLACEWAKDNIRT-NTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v-~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      +++++.|++++|||| |+|+||+++|++.......     ....+....|.+ +.+|+|++++++|++++...+++|++.
T Consensus       166 ~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~~-----~~~~~~~~~~~~-~~~pedvA~~~~~l~s~~~~~~~~~i~  239 (252)
T 3h7a_A          166 AQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQ-----MFGKDALANPDL-LMPPAAVAGAYWQLYQQPKSAWTFEME  239 (252)
T ss_dssp             HHHHHHHHGGGTEEEEEEEEC---------------------------------CCHHHHHHHHHHHHHCCGGGBCSEEE
T ss_pred             HHHHHHHhhhcCCEEEEEecCCccCChhhhccchh-----hhhhhhhcCCcc-CCCHHHHHHHHHHHHhCchhcceeeEE
Confidence            999999999999999 9999999999998764322     223344555666 899999999999999988888999875


Q ss_pred             Ee
Q 024994          240 CV  241 (259)
Q Consensus       240 ~~  241 (259)
                      ..
T Consensus       240 ~~  241 (252)
T 3h7a_A          240 IR  241 (252)
T ss_dssp             EB
T ss_pred             ee
Confidence            54

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=2.6e-46  Score=307.99  Aligned_cols=242  Identities=28%  Similarity=0.370  Sum_probs=216.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHH-HhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEW-KNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++ ...+.++.++++|++|.++++++++++.+.+ +++
T Consensus         3 k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i   81 (250)
T 2cfc_A            3 RVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQF-GAI   81 (250)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHH-SCC
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh-CCC
Confidence            68999999999999999999999999999999998888877776 3445579999999999999999999999999 689


Q ss_pred             cEEEEcCCCCCCCC---CCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHH
Q 024994           80 NILINNAAIAFVKP---TVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGA  156 (259)
Q Consensus        80 d~vi~~ag~~~~~~---~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  156 (259)
                      |+||||||.....+   +.+.+.++|++++++|+.+++.+++.++|.|.+++.++||++||..+..+.++...|++||++
T Consensus        82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  161 (250)
T 2cfc_A           82 DVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGA  161 (250)
T ss_dssp             CEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCchhHHHHHHH
Confidence            99999999876555   778899999999999999999999999999988778999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccc
Q 024994          157 MNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG  236 (259)
Q Consensus       157 ~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G  236 (259)
                      ++.|+++++.|+.++||+++.++||+++|++......   .+.....+....|.+++.+|+|+++++++++++...+++|
T Consensus       162 ~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  238 (250)
T 2cfc_A          162 VLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLD---QPELRDQVLARIPQKEIGTAAQVADAVMFLAGEDATYVNG  238 (250)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHT---SHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSTTCTTCCS
T ss_pred             HHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccC---CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhhcccC
Confidence            9999999999999999999999999999998653111   1223445556678899999999999999999988899999


Q ss_pred             cEEEeCCCce
Q 024994          237 QIICVDGGVT  246 (259)
Q Consensus       237 ~~l~~dgG~~  246 (259)
                      +++.+|||.+
T Consensus       239 ~~~~v~gG~~  248 (250)
T 2cfc_A          239 AALVMDGAYT  248 (250)
T ss_dssp             CEEEESTTGG
T ss_pred             CEEEECCcee
Confidence            9999999975

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=7.5e-47  Score=309.56  Aligned_cols=233  Identities=33%  Similarity=0.537  Sum_probs=208.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.++.   .+++   +  +.++++|++| ++++++++++.+.+ +++|
T Consensus         3 k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~---~~~~---~--~~~~~~D~~~-~~~~~~~~~~~~~~-g~id   72 (239)
T 2ekp_A            3 RKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEA---AQSL---G--AVPLPTDLEK-DDPKGLVKRALEAL-GGLH   72 (239)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHH---HHHH---T--CEEEECCTTT-SCHHHHHHHHHHHH-TSCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH---HHhh---C--cEEEecCCch-HHHHHHHHHHHHHc-CCCC
Confidence            6899999999999999999999999999999998762   2233   2  7788999999 99999999999998 7899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCC--CCChhhhhhHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI--PSVSLYGAYKGAMN  158 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~--~~~~~Y~~sK~a~~  158 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.++++++|.|.+++.++||++||..+..+.  ++...|++||++++
T Consensus        73 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~  152 (239)
T 2ekp_A           73 VLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALL  152 (239)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTSCCHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCCCCCccHHHHHHHHH
Confidence            9999999887778889999999999999999999999999999988778999999999998887  88999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI  238 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~  238 (259)
                      +|+++++.|++++||++|+|+||+++|++......   .+...+.+....|.+++.+|+|++++++|++++.+.+++|+.
T Consensus       153 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~  229 (239)
T 2ekp_A          153 GLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQ---NPELYEPITARIPMGRWARPEEIARVAAVLCGDEAEYLTGQA  229 (239)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHT---CHHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTTCCSCE
T ss_pred             HHHHHHHHHhhhcCcEEEEEEeCCccCchhhcccc---CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCCCE
Confidence            99999999999999999999999999998653211   122344555667889999999999999999998889999999


Q ss_pred             EEeCCCce
Q 024994          239 ICVDGGVT  246 (259)
Q Consensus       239 l~~dgG~~  246 (259)
                      +.+|||..
T Consensus       230 ~~vdgG~~  237 (239)
T 2ekp_A          230 VAVDGGFL  237 (239)
T ss_dssp             EEESTTTT
T ss_pred             EEECCCcc
Confidence            99999964

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=5.1e-47  Score=316.02  Aligned_cols=242  Identities=28%  Similarity=0.423  Sum_probs=210.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+.+++..+++.    ++.++++|++|.++++++++++.+.+ +++|
T Consensus        10 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD   84 (270)
T 1yde_A           10 KVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP----GAVFILCDVTQEDDVKTLVSETIRRF-GRLD   84 (270)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT----TEEEEECCTTSHHHHHHHHHHHHHHH-SCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----CCeEEEcCCCCHHHHHHHHHHHHHHc-CCCC
Confidence            689999999999999999999999999999999988776655442    47889999999999999999999999 7999


Q ss_pred             EEEEcCCCCC-CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      +||||||... ..++.+.+.++|++++++|+.+++.++++++|+|.++ .++||++||..+..+.++...|++||+++++
T Consensus        85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~  163 (270)
T 1yde_A           85 CVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQAQAVPYVATKGAVTA  163 (270)
T ss_dssp             EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCCTTCHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCEEEEEcCccccCCCCCCcccHHHHHHHHH
Confidence            9999999865 3577888999999999999999999999999999765 5999999999998898999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCC-CCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEG-PEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI  238 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~  238 (259)
                      |+++++.|++++||+||+|+||+++|++....... ..............|++|+++|+|++++++||+++ +.++||+.
T Consensus       164 ~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~-~~~itG~~  242 (270)
T 1yde_A          164 MTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE-ANFCTGIE  242 (270)
T ss_dssp             HHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHHH-CTTCCSCE
T ss_pred             HHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCCCCCcCHHHHHHHHHHHccc-CCCcCCCE
Confidence            99999999999999999999999999986432111 11111122233467899999999999999999997 78999999


Q ss_pred             EEeCCCceeee
Q 024994          239 ICVDGGVTVTV  249 (259)
Q Consensus       239 l~~dgG~~~~~  249 (259)
                      |.+|||..+..
T Consensus       243 i~vdGG~~~~~  253 (270)
T 1yde_A          243 LLVTGGAELGY  253 (270)
T ss_dssp             EEESTTTTSCC
T ss_pred             EEECCCeeccc
Confidence            99999987653

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=2.6e-46  Score=309.91  Aligned_cols=248  Identities=28%  Similarity=0.405  Sum_probs=221.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeC-ChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSR-NQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||++|||++++++|+++|++|++++| +.+.+++..+++...+.++.++++|++|.++++++++++.+.+ +++
T Consensus         8 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~i   86 (261)
T 1gee_A            8 KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF-GKL   86 (261)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH-SCC
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc-CCC
Confidence            68999999999999999999999999999999 8888877777777666789999999999999999999999998 689


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      |+||||||.....++.+.+.++|++++++|+.+++.++++++|.|.+++ .++||++||..+..+.++...|++||++++
T Consensus        87 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~  166 (261)
T 1gee_A           87 DVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMK  166 (261)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCCccHHHHHHHHHH
Confidence            9999999988777788889999999999999999999999999998876 789999999999999999999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI  238 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~  238 (259)
                      .++++++.++.++||++++++||+++|++.......   +.....+....|.+++.+|+|+++++++++++.+.+++|+.
T Consensus       167 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~  243 (261)
T 1gee_A          167 LMTETLALEYAPKGIRVNNIGPGAINTPINAEKFAD---PEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTGIT  243 (261)
T ss_dssp             HHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHS---HHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccC---hhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCcE
Confidence            999999999999999999999999999986432111   12334445567888999999999999999998888999999


Q ss_pred             EEeCCCceeeeccc
Q 024994          239 ICVDGGVTVTVNVN  252 (259)
Q Consensus       239 l~~dgG~~~~~~~~  252 (259)
                      +.+|||..+..++.
T Consensus       244 ~~v~gg~~~~~~~~  257 (261)
T 1gee_A          244 LFADGGMTLYPSFQ  257 (261)
T ss_dssp             EEESTTGGGCGGGG
T ss_pred             EEEcCCcccCCCCC
Confidence            99999998765554

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=5.9e-47  Score=314.14  Aligned_cols=241  Identities=24%  Similarity=0.323  Sum_probs=210.8

Q ss_pred             CEEEEEcCc--chHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGT--RGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s--~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||+  +|||++++++|+++|++|++++|+.+ .++..+++......+.++++|++|.++++++++++.+.+ ++
T Consensus         9 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~   86 (261)
T 2wyu_A            9 KKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAF-GG   86 (261)
T ss_dssp             CEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHH-SS
T ss_pred             CEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHc-CC
Confidence            689999999  99999999999999999999999885 333444444322247889999999999999999999999 79


Q ss_pred             ccEEEEcCCCCCC----CCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhH
Q 024994           79 LNILINNAAIAFV----KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYK  154 (259)
Q Consensus        79 id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  154 (259)
                      +|+||||||....    .++.+.+.++|++++++|+.+++.++++++|.|.+  .++||++||..+..+.++...|++||
T Consensus        87 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asK  164 (261)
T 2wyu_A           87 LDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYASEKVVPKYNVMAIAK  164 (261)
T ss_dssp             EEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEEECGGGTSBCTTCHHHHHHH
T ss_pred             CCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc--CCEEEEEecccccCCCCCchHHHHHH
Confidence            9999999998753    56778899999999999999999999999999864  48999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 024994          155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYI  234 (259)
Q Consensus       155 ~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~  234 (259)
                      +++++|+++++.|++++||+||+|+||+++|++.....   ..+...+.+....|.+++.+|+|++++++|++++.+.++
T Consensus       165 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~s~~~~~~  241 (261)
T 2wyu_A          165 AALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIP---GFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPLASGI  241 (261)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCT---THHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhcc---ccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhcCC
Confidence            99999999999999999999999999999999865421   112344556667899999999999999999999888999


Q ss_pred             cccEEEeCCCceee
Q 024994          235 TGQIICVDGGVTVT  248 (259)
Q Consensus       235 ~G~~l~~dgG~~~~  248 (259)
                      +|+.+++|||.+++
T Consensus       242 tG~~~~vdgG~~~~  255 (261)
T 2wyu_A          242 TGEVVYVDAGYHIM  255 (261)
T ss_dssp             CSCEEEESTTGGGB
T ss_pred             CCCEEEECCCcccc
Confidence            99999999998764

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=9e-47  Score=311.11  Aligned_cols=232  Identities=20%  Similarity=0.240  Sum_probs=203.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhc--C-CcEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK--G-FKVTGSVCDLSSREQREKLIETVTSIFQG   77 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++...  + .++.++++|++|.++++++++++.+.+ +
T Consensus         8 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g   86 (250)
T 3nyw_A            8 GLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKY-G   86 (250)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHH-C
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhc-C
Confidence            68999999999999999999999999999999999998888887654  2 578899999999999999999999999 7


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHH
Q 024994           78 KLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAM  157 (259)
Q Consensus        78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~  157 (259)
                      ++|+||||||.....++ +.+.++|++++++|+.+++.++++++|+|.+++.++||++||..+..+.++...|++||+++
T Consensus        87 ~iD~lvnnAg~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~  165 (250)
T 3nyw_A           87 AVDILVNAAAMFMDGSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGSTKFAL  165 (250)
T ss_dssp             CEEEEEECCCCCCCCCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CCTTHHHHHHHHH
T ss_pred             CCCEEEECCCcCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCCCcchHHHHHHH
Confidence            99999999999877777 77899999999999999999999999999988789999999999999777799999999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCC-CCCccc
Q 024994          158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPA-ASYITG  236 (259)
Q Consensus       158 ~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~-~~~~~G  236 (259)
                      ++|+++++.|++++|||||+|+||+++|++.....             ...+.+++.+|+|++++++|++++. ..++++
T Consensus       166 ~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-------------~~~~~~~~~~p~dva~~v~~l~s~~~~~~~~~  232 (250)
T 3nyw_A          166 LGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAG-------------TPFKDEEMIQPDDLLNTIRCLLNLSENVCIKD  232 (250)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHTT-------------CCSCGGGSBCHHHHHHHHHHHHTSCTTEECCE
T ss_pred             HHHHHHHHHHhhhcCcEEEEEecCcccCchhhhcC-------------CCcccccCCCHHHHHHHHHHHHcCCCceEeeE
Confidence            99999999999999999999999999999764332             2235567889999999999999955 457888


Q ss_pred             cEEEeCCCcee
Q 024994          237 QIICVDGGVTV  247 (259)
Q Consensus       237 ~~l~~dgG~~~  247 (259)
                      ..|.+|||...
T Consensus       233 ~~i~vd~~~~~  243 (250)
T 3nyw_A          233 IVFEMKKSIIE  243 (250)
T ss_dssp             EEEEEHHHHHC
T ss_pred             EEEEeeccccc
Confidence            89999999754

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=4.3e-47  Score=313.50  Aligned_cols=230  Identities=33%  Similarity=0.496  Sum_probs=200.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.++++           .+.++++|++|.++++++++++.+.+ +++|
T Consensus        22 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~Dl~d~~~v~~~~~~~~~~~-g~iD   89 (253)
T 2nm0_A           22 RSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE-----------GFLAVKCDITDTEQVEQAYKEIEETH-GPVE   89 (253)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-----------TSEEEECCTTSHHHHHHHHHHHHHHT-CSCS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc-----------cceEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence            68999999999999999999999999999999876432           26788999999999999999999999 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.++++++|.|.+++.++||++||..+..+.++...|++||+++++|
T Consensus        90 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~  169 (253)
T 2nm0_A           90 VLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGF  169 (253)
T ss_dssp             EEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCcHHHHHHHHHHHHH
Confidence            99999999877778888999999999999999999999999999887789999999999988888889999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC  240 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~  240 (259)
                      +++++.|++++||++|+|+||+++|++......  .   ..+.+....|.+++.+|+|++++++|++++.+.+++|+.+.
T Consensus       170 ~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~--~---~~~~~~~~~p~~~~~~p~dvA~~i~~l~s~~~~~~tG~~i~  244 (253)
T 2nm0_A          170 ARSLARELGSRNITFNVVAPGFVDTDMTKVLTD--E---QRANIVSQVPLGRYARPEEIAATVRFLASDDASYITGAVIP  244 (253)
T ss_dssp             HHHHHHHHCSSSEEEEEEEECSBCC--------------CHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHhhhcCeEEEEEEeCcCcCcchhhcCH--H---HHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCcEEE
Confidence            999999999999999999999999998754321  1   23344556788999999999999999999888999999999


Q ss_pred             eCCCcee
Q 024994          241 VDGGVTV  247 (259)
Q Consensus       241 ~dgG~~~  247 (259)
                      +|||..+
T Consensus       245 vdGG~~~  251 (253)
T 2nm0_A          245 VDGGLGM  251 (253)
T ss_dssp             ESTTTTC
T ss_pred             ECCcccc
Confidence            9999865

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=9.9e-47  Score=311.58  Aligned_cols=241  Identities=24%  Similarity=0.309  Sum_probs=210.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.++++...+ +...+.++..+     |.++++++++++.+.+ +++|
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~~~~~~~~-----d~~~v~~~~~~~~~~~-g~iD   74 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAETYPQLKPM-----SEQEPAELIEAVTSAY-GQVD   74 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHHCTTSEEC-----CCCSHHHHHHHHHHHH-SCCC
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhcCCcEEEE-----CHHHHHHHHHHHHHHh-CCCC
Confidence            689999999999999999999999999999999888776654 54444455443     6667788899998888 7999


Q ss_pred             EEEEcCCCC-CCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      +||||||.. ...++.+.+.++|++++++|+.+++.++++++|+|.+++.++||++||..+..+.++...|++||+++++
T Consensus        75 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~  154 (254)
T 1zmt_A           75 VLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACT  154 (254)
T ss_dssp             EEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHH
T ss_pred             EEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCCchHHHHHHHHHHH
Confidence            999999987 6678888999999999999999999999999999988778999999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCce---------eCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVI---------KTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPA  230 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v---------~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  230 (259)
                      |+++++.|++++||+||+|+||++         +|++....      +.....+....|.+++.+|+|++++++|++++.
T Consensus       155 ~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~------~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~  228 (254)
T 1zmt_A          155 LANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTN------PEHVAHVKKVTALQRLGTQKELGELVAFLASGS  228 (254)
T ss_dssp             HHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTC------HHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccC------hHHHHHHhccCCCCCCcCHHHHHHHHHHHhCcc
Confidence            999999999999999999999999         66654321      123444556678999999999999999999998


Q ss_pred             CCCccccEEEeCCCceeeeccccc
Q 024994          231 ASYITGQIICVDGGVTVTVNVNGL  254 (259)
Q Consensus       231 ~~~~~G~~l~~dgG~~~~~~~~~~  254 (259)
                      +.+++|+++.+|||..+...|.++
T Consensus       229 ~~~~tG~~~~vdgG~~~~~~~~~~  252 (254)
T 1zmt_A          229 CDYLTGQVFWLAGGFPMIERWPGM  252 (254)
T ss_dssp             CGGGTTCEEEESTTCCCCCCCTTC
T ss_pred             cCCccCCEEEECCCchhhccCCCC
Confidence            899999999999998876666554

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=1.1e-46  Score=314.80  Aligned_cols=240  Identities=20%  Similarity=0.255  Sum_probs=211.2

Q ss_pred             CEEEEEcCc--chHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGT--RGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s--~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||+  +|||++++++|+++|++|++++|+.+ .++..+++......+.++++|++|.++++++++++.+.+ ++
T Consensus         7 k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~   84 (275)
T 2pd4_A            7 KKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL-GS   84 (275)
T ss_dssp             CEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT-SC
T ss_pred             CEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHc-CC
Confidence            689999999  99999999999999999999999886 444444444332347889999999999999999999999 79


Q ss_pred             ccEEEEcCCCCCC----CCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhH
Q 024994           79 LNILINNAAIAFV----KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYK  154 (259)
Q Consensus        79 id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  154 (259)
                      +|+||||||+...    .++.+.+.++|++++++|+.+++.++++++|.|.+  .++||++||..+..+.++...|++||
T Consensus        85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asK  162 (275)
T 2pd4_A           85 LDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN--GASVLTLSYLGSTKYMAHYNVMGLAK  162 (275)
T ss_dssp             EEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTCHHHHHHH
T ss_pred             CCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEecchhcCCCCCchhhHHHH
Confidence            9999999998754    56778899999999999999999999999999964  48999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 024994          155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYI  234 (259)
Q Consensus       155 ~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~  234 (259)
                      +++++|+++++.|++++||+||+|+||+++|++.....   ..+.....+....|.+++.+|+|++++++|++++.+.++
T Consensus       163 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~---~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~s~~~~~~  239 (275)
T 2pd4_A          163 AALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIA---DFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSSGV  239 (275)
T ss_dssp             HHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGST---THHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhcc---ccHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCccccCC
Confidence            99999999999999999999999999999999875432   112244555667899999999999999999999888999


Q ss_pred             cccEEEeCCCcee
Q 024994          235 TGQIICVDGGVTV  247 (259)
Q Consensus       235 ~G~~l~~dgG~~~  247 (259)
                      +|+.+.+|||..+
T Consensus       240 tG~~~~vdgg~~~  252 (275)
T 2pd4_A          240 SGEVHFVDAGYHV  252 (275)
T ss_dssp             CSCEEEESTTGGG
T ss_pred             CCCEEEECCCccc
Confidence            9999999999865

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=3.6e-46  Score=313.20  Aligned_cols=242  Identities=24%  Similarity=0.328  Sum_probs=210.7

Q ss_pred             CEEEEEcCc--chHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGT--RGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s--~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||+  +|||++++++|+++|++|++++|+.+ .++..+++......+.++++|++|.++++++++++.+.+ ++
T Consensus        22 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g~   99 (285)
T 2p91_A           22 KRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENW-GS   99 (285)
T ss_dssp             CEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT-SC
T ss_pred             CEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHc-CC
Confidence            689999999  99999999999999999999999885 344444444322347788999999999999999999999 79


Q ss_pred             ccEEEEcCCCCCC----CCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhH
Q 024994           79 LNILINNAAIAFV----KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYK  154 (259)
Q Consensus        79 id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  154 (259)
                      +|+||||||....    .++.+.+.++|++++++|+.+++.++++++|.|.++ .++||++||..+..+.++...|++||
T Consensus       100 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK  178 (285)
T 2p91_A          100 LDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR-NGAIVTLSYYGAEKVVPHYNVMGIAK  178 (285)
T ss_dssp             CCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS-CCEEEEEECGGGTSBCTTTTHHHHHH
T ss_pred             CCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCEEEEEccchhccCCCCccHHHHHH
Confidence            9999999998754    567788999999999999999999999999999754 59999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 024994          155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYI  234 (259)
Q Consensus       155 ~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~  234 (259)
                      +++++|+++++.|++++||+||+|+||+++|++.....   ......+.+....|.+++.+|+|++++++|++++.+.++
T Consensus       179 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~s~~~~~~  255 (285)
T 2p91_A          179 AALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSIT---GFHLLMEHTTKVNPFGKPITIEDVGDTAVFLCSDWARAI  255 (285)
T ss_dssp             HHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CT---THHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGGTTC
T ss_pred             HHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhccc---chHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCcccCC
Confidence            99999999999999999999999999999999865432   112244555667889999999999999999999888999


Q ss_pred             cccEEEeCCCceee
Q 024994          235 TGQIICVDGGVTVT  248 (259)
Q Consensus       235 ~G~~l~~dgG~~~~  248 (259)
                      +|+.+.+|||..+.
T Consensus       256 tG~~~~vdgg~~~~  269 (285)
T 2p91_A          256 TGEVVHVDNGYHIM  269 (285)
T ss_dssp             CSCEEEESTTGGGB
T ss_pred             CCCEEEECCCcccc
Confidence            99999999998764

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=7.9e-47  Score=314.03  Aligned_cols=241  Identities=20%  Similarity=0.322  Sum_probs=209.4

Q ss_pred             CEEEEEcCc--chHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGT--RGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s--~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||+  +|||++++++|+++|++|++++|+. ..++..+++........++++|++|.++++++++++.+.+ ++
T Consensus        10 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~   87 (265)
T 1qsg_A           10 KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW-PK   87 (265)
T ss_dssp             CEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC-SS
T ss_pred             CEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHc-CC
Confidence            689999999  9999999999999999999999987 3444444444332234788999999999999999999988 79


Q ss_pred             ccEEEEcCCCCCC----CCCCC-CCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhh
Q 024994           79 LNILINNAAIAFV----KPTVD-ITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAY  153 (259)
Q Consensus        79 id~vi~~ag~~~~----~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  153 (259)
                      +|+||||||....    .++.+ .+.++|++++++|+.+++.++++++|+|.+  .++||++||..+..+.++...|++|
T Consensus        88 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~s  165 (265)
T 1qsg_A           88 FDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNYNVMGLA  165 (265)
T ss_dssp             EEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTTTHHHHH
T ss_pred             CCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEcchhhccCCCCchHHHHH
Confidence            9999999998653    55667 889999999999999999999999999964  4899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 024994          154 KGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASY  233 (259)
Q Consensus       154 K~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  233 (259)
                      |+++++|+++++.|++++||+||+|+||+++|++.....   ......+.+....|.+++.+|+|++++++|++++.+.+
T Consensus       166 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~s~~~~~  242 (265)
T 1qsg_A          166 KASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIK---DFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAG  242 (265)
T ss_dssp             HHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGST---THHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGGTT
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhccc---ccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcC
Confidence            999999999999999999999999999999999865432   11224455566678999999999999999999988899


Q ss_pred             ccccEEEeCCCceee
Q 024994          234 ITGQIICVDGGVTVT  248 (259)
Q Consensus       234 ~~G~~l~~dgG~~~~  248 (259)
                      ++|++|.+|||..++
T Consensus       243 ~tG~~~~vdgG~~~~  257 (265)
T 1qsg_A          243 ISGEVVHVDGGFSIA  257 (265)
T ss_dssp             CCSCEEEESTTGGGB
T ss_pred             ccCCEEEECCCcCCC
Confidence            999999999998764

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=8.7e-47  Score=310.68  Aligned_cols=230  Identities=31%  Similarity=0.484  Sum_probs=198.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++           +..+++|++|.++++++++++.+.+ +++|
T Consensus        16 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-----------~~~~~~D~~~~~~~~~~~~~~~~~~-g~id   83 (247)
T 1uzm_A           16 RSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG-----------LFGVEVDVTDSDAVDRAFTAVEEHQ-GPVE   83 (247)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT-----------SEEEECCTTCHHHHHHHHHHHHHHH-SSCS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH-----------hcCeeccCCCHHHHHHHHHHHHHHc-CCCC
Confidence            689999999999999999999999999999998765432           1137899999999999999999999 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.++++++|+|++++.++||++||..+..+.++...|++||+++++|
T Consensus        84 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  163 (247)
T 1uzm_A           84 VLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGM  163 (247)
T ss_dssp             EEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCCChhHHHHHHHHHHH
Confidence            99999999877788889999999999999999999999999999888789999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC  240 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~  240 (259)
                      +++++.|++++||+||+|+||+++|++.....     ......+....|.+++.+|+|+++.++|++++.+.+++|++|.
T Consensus       164 ~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-----~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~~G~~i~  238 (247)
T 1uzm_A          164 ARSIARELSKANVTANVVAPGYIDTDMTRALD-----ERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIP  238 (247)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBCCHHHHHSC-----HHHHHHHGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHhhhcCcEEEEEEeCCCcccchhhcC-----HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCCcCCEEE
Confidence            99999999999999999999999999864321     1234445566788999999999999999999888999999999


Q ss_pred             eCCCcee
Q 024994          241 VDGGVTV  247 (259)
Q Consensus       241 ~dgG~~~  247 (259)
                      +|||..+
T Consensus       239 vdgG~~~  245 (247)
T 1uzm_A          239 VDGGMGM  245 (247)
T ss_dssp             ESTTTTC
T ss_pred             ECCCccc
Confidence            9999764

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=6.7e-47  Score=311.17  Aligned_cols=237  Identities=23%  Similarity=0.352  Sum_probs=205.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++.. ++    .++.++++|++|.+++++++    +.+ +++|
T Consensus         7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~----~~~~~~~~D~~~~~~~~~~~----~~~-~~id   76 (246)
T 2ag5_A            7 KVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY----PGIQTRVLDVTKKKQIDQFA----NEV-ERLD   76 (246)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS----TTEEEEECCTTCHHHHHHHH----HHC-SCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc----cCceEEEeeCCCHHHHHHHH----HHh-CCCC
Confidence            68999999999999999999999999999999987765543 22    26889999999999988444    445 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCC-CChhhhhhHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIP-SVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~-~~~~Y~~sK~a~~~  159 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.++++++|+|.+++.++||++||..+..+.+ +...|++||+++++
T Consensus        77 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sK~a~~~  156 (246)
T 2ag5_A           77 VLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIG  156 (246)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHHHHHH
T ss_pred             EEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCCCCccHHHHHHHHHH
Confidence            99999999877788889999999999999999999999999999887789999999999988877 88999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcC-CCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE-GPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI  238 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~  238 (259)
                      |+++++.|++++||++|+|+||+++|++...... ..........+....|.+++.+|+|++++++|++++.+.+++|+.
T Consensus       157 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~  236 (246)
T 2ag5_A          157 LTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVTGNP  236 (246)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCCCCCE
Confidence            9999999999999999999999999997543110 111122344455667889999999999999999999889999999


Q ss_pred             EEeCCCcee
Q 024994          239 ICVDGGVTV  247 (259)
Q Consensus       239 l~~dgG~~~  247 (259)
                      |.+|||.++
T Consensus       237 i~vdgG~~~  245 (246)
T 2ag5_A          237 VIIDGGWSL  245 (246)
T ss_dssp             EEECTTGGG
T ss_pred             EEECCCccC
Confidence            999999754

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=1.3e-46  Score=313.33  Aligned_cols=240  Identities=23%  Similarity=0.260  Sum_probs=206.2

Q ss_pred             CEEEEEcC--cchHHHHHHHHHHHCCCEEEEeeCChhHH-HHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024994            1 MTALVTGG--TRGIGHATVEELARFGAIVHTCSRNQIEL-DARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG   77 (259)
Q Consensus         1 k~~lItG~--s~giG~~~a~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (259)
                      |++|||||  ++|||++++++|+++|++|++++|+.++. ++..++   .+.++.++++|++|.++++++++++.+.+ +
T Consensus         8 k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g   83 (269)
T 2h7i_A            8 KRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDR---LPAKAPLLELDVQNEEHLASLAGRVTEAI-G   83 (269)
T ss_dssp             CEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTT---SSSCCCEEECCTTCHHHHHHHHHHHHHHH-C
T ss_pred             CEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHh---cCCCceEEEccCCCHHHHHHHHHHHHHHh-C
Confidence            68999999  99999999999999999999999987653 443332   24467889999999999999999999999 6


Q ss_pred             ---CccEEEEcCCCCC-----CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChh
Q 024994           78 ---KLNILINNAAIAF-----VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSL  149 (259)
Q Consensus        78 ---~id~vi~~ag~~~-----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~  149 (259)
                         ++|+||||||...     ..++.+.+.++|++++++|+.+++.++++++|+|.+  .++||++||..+ .+.+.+..
T Consensus        84 ~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~iss~~~-~~~~~~~~  160 (269)
T 2h7i_A           84 AGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP--GGSIVGMDFDPS-RAMPAYNW  160 (269)
T ss_dssp             TTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECCCS-SCCTTTHH
T ss_pred             CCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--CCeEEEEcCccc-cccCchHH
Confidence               8999999999875     457788899999999999999999999999999965  389999999876 67788999


Q ss_pred             hhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCch-------HHHHhhhhcCCCC-CCCCHHHHHH
Q 024994          150 YGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGS-------EFLDGIARQTPIG-RAGEPDEVSS  221 (259)
Q Consensus       150 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~-------~~~~~~~~~~~~~-~~~~~~~va~  221 (259)
                      |++||+++++|+++++.|++++||+||+|+||+++|++..........+       ...+.+....|.+ |+.+|+|+++
T Consensus       161 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~rr~~~p~dvA~  240 (269)
T 2h7i_A          161 MTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAK  240 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCCcccCCCCHHHHHH
Confidence            9999999999999999999999999999999999999764321110001       1223445678898 6999999999


Q ss_pred             HHHHHhCCCCCCccccEEEeCCCcee
Q 024994          222 LVAFLCLPAASYITGQIICVDGGVTV  247 (259)
Q Consensus       222 ~~~~l~~~~~~~~~G~~l~~dgG~~~  247 (259)
                      +++||+++.+.++||+.|.+|||.++
T Consensus       241 ~v~~L~s~~~~~itG~~i~vdGG~~~  266 (269)
T 2h7i_A          241 TVCALLSDWLPATTGDIIYADGGAHT  266 (269)
T ss_dssp             HHHHHHSSSCTTCCSEEEEESTTGGG
T ss_pred             HHHHHhCchhccCcceEEEecCCeee
Confidence            99999999999999999999999765

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=5.8e-46  Score=308.76  Aligned_cols=244  Identities=62%  Similarity=0.983  Sum_probs=191.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++...+.++.++.+|++|.++++++++++.+.+++++|
T Consensus        15 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   94 (266)
T 1xq1_A           15 KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLD   94 (266)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCCCc
Confidence            68999999999999999999999999999999999888888887766678999999999999999999999998845899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.++++++|.|.+.+.++||++||..+..+.++...|++||++++.|
T Consensus        95 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  174 (266)
T 1xq1_A           95 ILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQL  174 (266)
T ss_dssp             EEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCCCchHHHHHHHHHHH
Confidence            99999998877788888999999999999999999999999999887789999999999998888999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC  240 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~  240 (259)
                      +++++.+++++||++++|+||+++|++...... .   .....+....|.+++.+|+|++++++|++++.+.+++|+.+.
T Consensus       175 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~  250 (266)
T 1xq1_A          175 ARNLACEWASDGIRANAVAPAVIATPLAEAVYD-D---EFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYITGQTIC  250 (266)
T ss_dssp             HHHHHHHHGGGTCEEEEEECCSCC-----------------------------CCGGGGHHHHHHHTSGGGTTCCSCEEE
T ss_pred             HHHHHHHHhHhCcEEEEEeeCCCccchhhhhcC-H---HHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCcEEE
Confidence            999999999999999999999999998765321 1   123334455678889999999999999999888899999999


Q ss_pred             eCCCceee
Q 024994          241 VDGGVTVT  248 (259)
Q Consensus       241 ~dgG~~~~  248 (259)
                      +|||..+.
T Consensus       251 v~gG~~~~  258 (266)
T 1xq1_A          251 VDGGLTVN  258 (266)
T ss_dssp             CCCCEEET
T ss_pred             EcCCcccc
Confidence            99998763

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=2.2e-46  Score=311.20  Aligned_cols=238  Identities=30%  Similarity=0.424  Sum_probs=210.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+.           +.++.++++|++|.++++++++++.+.+ +++|
T Consensus         9 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g~iD   76 (264)
T 2dtx_A            9 KVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-----------EAKYDHIECDVTNPDQVKASIDHIFKEY-GSIS   76 (264)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-----------SCSSEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-----------CCceEEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence            789999999999999999999999999999998764           3467889999999999999999999999 7899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.++++++|.|.+++.++||++||..+..+.++...|++||+++++|
T Consensus        77 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  156 (264)
T 2dtx_A           77 VLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGL  156 (264)
T ss_dssp             EEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCCchhHHHHHHHHHHH
Confidence            99999999877788899999999999999999999999999999887789999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcC---CCCc---hHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE---GPEG---SEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYI  234 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~---~~~~---~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~  234 (259)
                      +++++.|+.+. |+||+|+||+++|++......   ....   ....+.+....|.+++.+|+|++++++|++++.+.++
T Consensus       157 ~~~la~e~~~~-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~  235 (264)
T 2dtx_A          157 TKSIALDYAPL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLASREASFI  235 (264)
T ss_dssp             HHHHHHHHTTT-SEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHhcCC-cEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCC
Confidence            99999999988 999999999999998643210   0010   0233444556788999999999999999999888999


Q ss_pred             cccEEEeCCCceeeecc
Q 024994          235 TGQIICVDGGVTVTVNV  251 (259)
Q Consensus       235 ~G~~l~~dgG~~~~~~~  251 (259)
                      +|+.+.+|||..+..+.
T Consensus       236 tG~~i~vdGG~~~~~p~  252 (264)
T 2dtx_A          236 TGTCLYVDGGLSIRAPI  252 (264)
T ss_dssp             CSCEEEESTTGGGCCCC
T ss_pred             CCcEEEECCCcccCCCC
Confidence            99999999998775544

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=1.5e-46  Score=320.69  Aligned_cols=239  Identities=26%  Similarity=0.318  Sum_probs=212.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCC----------hhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRN----------QIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIET   70 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~----------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   70 (259)
                      |++|||||++|||+++|++|+++|++|++++|+          .+.+++..+++...+.++.++.+|++|.+++++++++
T Consensus        28 k~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~  107 (322)
T 3qlj_A           28 RVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLIQT  107 (322)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence            689999999999999999999999999999998          6778888888887778899999999999999999999


Q ss_pred             HHHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC------CCEEEEecCCCccCCC
Q 024994           71 VTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG------NGSIVFISSVGGVRGI  144 (259)
Q Consensus        71 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~------~~~ii~isS~~~~~~~  144 (259)
                      +.+.+ +++|+||||||+....++.+.+.++|++++++|+.+++.++++++|+|.+.+      .++||++||..+..+.
T Consensus       108 ~~~~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~  186 (322)
T 3qlj_A          108 AVETF-GGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGS  186 (322)
T ss_dssp             HHHHH-SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHHCB
T ss_pred             HHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHccCC
Confidence            99999 7999999999998888888999999999999999999999999999997532      3799999999999999


Q ss_pred             CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHH
Q 024994          145 PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVA  224 (259)
Q Consensus       145 ~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~  224 (259)
                      ++...|++||+++++|+++++.|++++||+||+|+|| +.|++.........     .   ...+..+..+|+|++++++
T Consensus       187 ~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~-----~---~~~~~~~~~~pedva~~v~  257 (322)
T 3qlj_A          187 VGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMM-----A---TQDQDFDAMAPENVSPLVV  257 (322)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC----------------CCTTCGGGTHHHHH
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhh-----h---ccccccCCCCHHHHHHHHH
Confidence            9999999999999999999999999999999999999 99998865433211     0   1112234568999999999


Q ss_pred             HHhCCCCCCccccEEEeCCCceeee
Q 024994          225 FLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       225 ~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      ||+++.+.++||++|.+|||.....
T Consensus       258 ~L~s~~~~~itG~~i~vdGG~~~~~  282 (322)
T 3qlj_A          258 WLGSAEARDVTGKVFEVEGGKIRVA  282 (322)
T ss_dssp             HHTSGGGGGCCSCEEEEETTEEEEE
T ss_pred             HHhCccccCCCCCEEEECCCccccC
Confidence            9999999999999999999987743

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=3.5e-45  Score=301.08  Aligned_cols=233  Identities=24%  Similarity=0.329  Sum_probs=206.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++...+.++.++++|++|.++++++++++.+.+ +++|
T Consensus         8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~-g~id   86 (247)
T 2jah_A            8 KVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEAL-GGLD   86 (247)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-SCCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-CCCC
Confidence            689999999999999999999999999999999999888888887666789999999999999999999999999 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||....+++.+.+.++|++++++|+.+++.++++++|+|.+++ ++||++||..+..+.++...|++||+++++|
T Consensus        87 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~  165 (247)
T 2jah_A           87 ILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVRNAAVYQATKFGVNAF  165 (247)
T ss_dssp             EEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCCTTCHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCCCCCcHHHHHHHHHHHH
Confidence            999999998778888999999999999999999999999999998776 9999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCC--CCHHHHHHHHHHHhCCCCCCccccE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRA--GEPDEVSSLVAFLCLPAASYITGQI  238 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~va~~~~~l~~~~~~~~~G~~  238 (259)
                      +++++.|++++||+||+|+||+++|++......    ......+. ..| +++  .+|+|++++++|++++.+.++++++
T Consensus       166 ~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~----~~~~~~~~-~~~-~~~~~~~pedvA~~v~~l~s~~~~~~~~~i  239 (247)
T 2jah_A          166 SETLRQEVTERGVRVVVIEPGTTDTELRGHITH----TATKEMYE-QRI-SQIRKLQAQDIAEAVRYAVTAPHHATVHEI  239 (247)
T ss_dssp             HHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCC----HHHHHHHH-HHT-TTSCCBCHHHHHHHHHHHHHSCTTEEEEEE
T ss_pred             HHHHHHHhcccCcEEEEEECCCCCCcchhcccc----hhhHHHHH-hcc-cccCCCCHHHHHHHHHHHhCCCccCccceE
Confidence            999999999999999999999999998654321    11112222 224 555  8999999999999998888888764


Q ss_pred             EEeC
Q 024994          239 ICVD  242 (259)
Q Consensus       239 l~~d  242 (259)
                       .++
T Consensus       240 -~i~  242 (247)
T 2jah_A          240 -FIR  242 (247)
T ss_dssp             -EEE
T ss_pred             -Eec
Confidence             444

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=1.9e-45  Score=308.78  Aligned_cols=240  Identities=31%  Similarity=0.467  Sum_probs=215.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++...+.++.++.+|++|.++++++++++.+.+ +++|
T Consensus        45 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~-~~id  123 (285)
T 2c07_A           45 KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH-KNVD  123 (285)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC-SCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhc-CCCC
Confidence            689999999999999999999999999999999998888888887666789999999999999999999999998 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.+++.++|.|.+.+.++||++||..+..+.++...|++||++++.|
T Consensus       124 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~  203 (285)
T 2c07_A          124 ILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGF  203 (285)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCCchHHHHHHHHHHH
Confidence            99999999877788889999999999999999999999999999877779999999999999989999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC  240 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~  240 (259)
                      +++++.|+.+.||++++|+||+++|++.....     +.....+....|.+++.+|+|+++++++++++.+.+++|+.+.
T Consensus       204 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~G~~i~  278 (285)
T 2c07_A          204 TKSLAKELASRNITVNAIAPGFISSDMTDKIS-----EQIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGYINGRVFV  278 (285)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBCC-----CC-----HHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHHHHhCcEEEEEEeCcEecCchhhcC-----HHHHHHHHhhCCCCCCCCHHHHHHHHHHHhCCCcCCCCCCEEE
Confidence            99999999999999999999999999875421     2244455566788899999999999999999888899999999


Q ss_pred             eCCCce
Q 024994          241 VDGGVT  246 (259)
Q Consensus       241 ~dgG~~  246 (259)
                      +|||.+
T Consensus       279 v~gG~~  284 (285)
T 2c07_A          279 IDGGLS  284 (285)
T ss_dssp             ESTTSC
T ss_pred             eCCCcc
Confidence            999975

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=3.9e-45  Score=302.64  Aligned_cols=241  Identities=33%  Similarity=0.484  Sum_probs=217.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+.++...+++...+.++.++++|++|.++++++++++.+.+ +++|
T Consensus        14 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id   92 (260)
T 3awd_A           14 RVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQE-GRVD   92 (260)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence            689999999999999999999999999999999988888777777666789999999999999999999999998 7899


Q ss_pred             EEEEcCCCCC-CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCC--hhhhhhHHHH
Q 024994           81 ILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSV--SLYGAYKGAM  157 (259)
Q Consensus        81 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~--~~Y~~sK~a~  157 (259)
                      +||||||... ..++.+.+.++|++++++|+.+++.++++++|.|.+++.++||++||..+..+.++.  ..|++||+++
T Consensus        93 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~Y~~sK~a~  172 (260)
T 3awd_A           93 ILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGV  172 (260)
T ss_dssp             EEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCCHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCCCCccccHHHHHHH
Confidence            9999999876 567888899999999999999999999999999987778999999999988877776  8999999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEeCCceeCCCCC-CCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccc
Q 024994          158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK-PFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG  236 (259)
Q Consensus       158 ~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G  236 (259)
                      +.|+++++.|+.++||+++.|+||+++|++.. ...    .+.....+....|.+++.+|+|+++++.+++++...+++|
T Consensus       173 ~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  248 (260)
T 3awd_A          173 HQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGME----KPELYDAWIAGTPMGRVGQPDEVASVVQFLASDAASLMTG  248 (260)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHT----CHHHHHHHHHTCTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccC----ChHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCchhccCCC
Confidence            99999999999999999999999999999875 221    1224455566778899999999999999999988889999


Q ss_pred             cEEEeCCCce
Q 024994          237 QIICVDGGVT  246 (259)
Q Consensus       237 ~~l~~dgG~~  246 (259)
                      +.+++|||..
T Consensus       249 ~~~~v~gg~~  258 (260)
T 3awd_A          249 AIVNVDAGFT  258 (260)
T ss_dssp             CEEEESTTTT
T ss_pred             cEEEECCcee
Confidence            9999999975

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=9.7e-46  Score=317.94  Aligned_cols=234  Identities=21%  Similarity=0.267  Sum_probs=210.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhH-------HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE-------LDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTS   73 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   73 (259)
                      |++|||||++|||++++++|+++|++|++++|+.++       +++..+++...+.++.++++|++|.++++++++++.+
T Consensus        46 k~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~  125 (346)
T 3kvo_A           46 CTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAIK  125 (346)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            789999999999999999999999999999998874       5566777777778999999999999999999999999


Q ss_pred             HcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCC--CCCChhhh
Q 024994           74 IFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG--IPSVSLYG  151 (259)
Q Consensus        74 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~--~~~~~~Y~  151 (259)
                      .+ +++|+||||||+....++.+.+.++|++++++|+.+++.++++++|+|++++.++||++||..+..+  .+++..|+
T Consensus       126 ~~-g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~~~~~~~Y~  204 (346)
T 3kvo_A          126 KF-GGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYT  204 (346)
T ss_dssp             HH-SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGGTSSSHHHH
T ss_pred             Hc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCCCCCchHHH
Confidence            99 7999999999998888899999999999999999999999999999999888899999999999887  78899999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEeCCc-eeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 024994          152 AYKGAMNQLTKNLACEWAKDNIRTNTVAPWV-IKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPA  230 (259)
Q Consensus       152 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  230 (259)
                      +||+++++|+++++.|++ .||+||+|+||+ ++|++..             .+....+.++..+|+|+|++++||+++ 
T Consensus       205 aSKaal~~l~~~la~e~~-~gIrvn~v~PG~~i~T~~~~-------------~~~~~~~~~r~~~pedvA~~v~~L~s~-  269 (346)
T 3kvo_A          205 IAKYGMSMYVLGMAEEFK-GEIAVNALWPKTAIHTAAMD-------------MLGGPGIESQCRKVDIIADAAYSIFQK-  269 (346)
T ss_dssp             HHHHHHHHHHHHHHHHTT-TTCEEEEEECSBCBCCHHHH-------------HHCC--CGGGCBCTHHHHHHHHHHHTS-
T ss_pred             HHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCccccHHHH-------------hhccccccccCCCHHHHHHHHHHHHhc-
Confidence            999999999999999999 899999999995 8887543             222334567888999999999999999 


Q ss_pred             CCCccccEEEeCCCceeeecc
Q 024994          231 ASYITGQIICVDGGVTVTVNV  251 (259)
Q Consensus       231 ~~~~~G~~l~~dgG~~~~~~~  251 (259)
                      ++++||+++ +|||......+
T Consensus       270 ~~~itG~~i-vdgg~~~~~g~  289 (346)
T 3kvo_A          270 PKSFTGNFV-IDENILKEEGI  289 (346)
T ss_dssp             CTTCCSCEE-EHHHHHHHTTC
T ss_pred             CCCCCceEE-ECCcEehhcee
Confidence            899999998 99996654443

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=1.2e-45  Score=302.94  Aligned_cols=240  Identities=30%  Similarity=0.437  Sum_probs=216.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEE-eeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHT-CSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||++|||++++++|+++|++|++ .+|+.+..+...+++...+.++.++++|++|.++++++++++.+.+ +++
T Consensus         2 k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~i   80 (244)
T 1edo_A            2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAW-GTI   80 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHS-SCC
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHc-CCC
Confidence            78999999999999999999999999999 4899888887777776666789999999999999999999999999 789


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      |+||||||.....++.+.+.++|++++++|+.+++.++++++|+|.+++.++||++||..+..+.++...|++||+++++
T Consensus        81 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (244)
T 1edo_A           81 DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIG  160 (244)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCCCccchhhHHHHHH
Confidence            99999999987777888899999999999999999999999999988778999999999998898999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHh-CCCCCCccccE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLC-LPAASYITGQI  238 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~-~~~~~~~~G~~  238 (259)
                      |+++++.++.++||+++.++||+++|++.....     ......+....|.+++.+|+|++++++|++ ++.+.+++|+.
T Consensus       161 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~~G~~  235 (244)
T 1edo_A          161 FSKTAAREGASRNINVNVVCPGFIASDMTAKLG-----EDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQA  235 (244)
T ss_dssp             HHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC-----HHHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCSGGGGCCSCE
T ss_pred             HHHHHHHHhhhcCCEEEEEeeCccccchhhhcC-----hHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCccCCcCCCE
Confidence            999999999999999999999999999865431     223444556678889999999999999999 66778999999


Q ss_pred             EEeCCCce
Q 024994          239 ICVDGGVT  246 (259)
Q Consensus       239 l~~dgG~~  246 (259)
                      +++|||..
T Consensus       236 ~~v~gG~~  243 (244)
T 1edo_A          236 FTIDGGIA  243 (244)
T ss_dssp             EEESTTTT
T ss_pred             EEeCCCcc
Confidence            99999975

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=1.6e-45  Score=308.60  Aligned_cols=236  Identities=25%  Similarity=0.368  Sum_probs=210.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++   +.++.++++|++|.++++++++++ +.+ +++|
T Consensus        31 k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~-~~~-~~id  105 (281)
T 3ppi_A           31 ASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL---GNRAEFVSTNVTSEDSVLAAIEAA-NQL-GRLR  105 (281)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHH-TTS-SEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHH-HHh-CCCC
Confidence            68999999999999999999999999999999999988877776   457999999999999999999999 777 6899


Q ss_pred             EEEEc-CCCCCCCCC-----CCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHh------CCCCEEEEecCCCccCCCCCCh
Q 024994           81 ILINN-AAIAFVKPT-----VDITAEDMSTVSSTNFESVFHLSQLAHPLFKA------SGNGSIVFISSVGGVRGIPSVS  148 (259)
Q Consensus        81 ~vi~~-ag~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~------~~~~~ii~isS~~~~~~~~~~~  148 (259)
                      ++||| +|.....++     .+.+.++|++++++|+.+++.++++++|.|.+      .+.++||++||..+..+.++..
T Consensus       106 ~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  185 (281)
T 3ppi_A          106 YAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQT  185 (281)
T ss_dssp             EEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCCTTCH
T ss_pred             eEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCCCCCc
Confidence            99999 555444433     36789999999999999999999999999986      4578999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCC-CCCCCHHHHHHHHHHHh
Q 024994          149 LYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPI-GRAGEPDEVSSLVAFLC  227 (259)
Q Consensus       149 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~  227 (259)
                      .|++||+++++|+++++.|++++||+||+|+||+++|++.....     ......+....|. +++.+|+|++++++|++
T Consensus       186 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-----~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~  260 (281)
T 3ppi_A          186 AYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVG-----EEALAKFAANIPFPKRLGTPDEFADAAAFLL  260 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTC-----HHHHHHHHHTCCSSSSCBCHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhccc-----HHHHHHHHhcCCCCCCCCCHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999876532     2355666677777 89999999999999999


Q ss_pred             CCCCCCccccEEEeCCCceee
Q 024994          228 LPAASYITGQIICVDGGVTVT  248 (259)
Q Consensus       228 ~~~~~~~~G~~l~~dgG~~~~  248 (259)
                      ++  .+++|+.|.+|||.+++
T Consensus       261 s~--~~~tG~~i~vdGG~~~~  279 (281)
T 3ppi_A          261 TN--GYINGEVMRLDGAQRFT  279 (281)
T ss_dssp             HC--SSCCSCEEEESTTCCCC
T ss_pred             cC--CCcCCcEEEECCCcccC
Confidence            74  69999999999998864

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=2.6e-46  Score=307.30  Aligned_cols=232  Identities=25%  Similarity=0.313  Sum_probs=204.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEe-e--CChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTC-S--RNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG   77 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~-~--r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (259)
                      |++|||||++|||++++++|+++|++|+++ +  |+.+++++..+++  .+       .|+.|.++++++++++.+.+ +
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~--~~-------~~~~~~~~v~~~~~~~~~~~-g   71 (244)
T 1zmo_A            2 VIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN--PG-------TIALAEQKPERLVDATLQHG-E   71 (244)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS--TT-------EEECCCCCGGGHHHHHGGGS-S
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh--CC-------CcccCHHHHHHHHHHHHHHc-C
Confidence            789999999999999999999999999999 6  9998887766554  12       23337778888999998888 7


Q ss_pred             CccEEEEcCCCCCC---CCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhH
Q 024994           78 KLNILINNAAIAFV---KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYK  154 (259)
Q Consensus        78 ~id~vi~~ag~~~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  154 (259)
                      ++|+||||||....   .++.+.+.++|++++++|+.+++.++++++|+|.+++.++||++||..+..+.++...|++||
T Consensus        72 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  151 (244)
T 1zmo_A           72 AIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPAR  151 (244)
T ss_dssp             CEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTCTTHHHHH
T ss_pred             CCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCCchHHHHHH
Confidence            89999999998877   788899999999999999999999999999999888789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEeCCceeCCCC---CCCcCCCCchHHHHhhhh-cCCCCCCCCHHHHHHHHHHHhCCC
Q 024994          155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI---KPFEEGPEGSEFLDGIAR-QTPIGRAGEPDEVSSLVAFLCLPA  230 (259)
Q Consensus       155 ~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~va~~~~~l~~~~  230 (259)
                      +++++|+++++.|++++||+||+|+||+++|++.   .....    +.....+.. ..|.+++.+|+|++++++|++++.
T Consensus       152 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~----~~~~~~~~~~~~p~~r~~~pe~vA~~v~~l~s~~  227 (244)
T 1zmo_A          152 AATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWEN----NPELRERVDRDVPLGRLGRPDEMGALITFLASRR  227 (244)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHH----CHHHHHHHHHHCTTCSCBCHHHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccc----hHHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCcc
Confidence            9999999999999999999999999999999986   43211    112333444 678899999999999999999998


Q ss_pred             CCCccccEEEeCCCce
Q 024994          231 ASYITGQIICVDGGVT  246 (259)
Q Consensus       231 ~~~~~G~~l~~dgG~~  246 (259)
                      +.++||+.|.+|||.+
T Consensus       228 ~~~~tG~~i~vdgG~~  243 (244)
T 1zmo_A          228 AAPIVGQFFAFTGGYL  243 (244)
T ss_dssp             TGGGTTCEEEESTTCC
T ss_pred             ccCccCCEEEeCCCCC
Confidence            9999999999999964

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=7.8e-45  Score=301.53  Aligned_cols=231  Identities=26%  Similarity=0.352  Sum_probs=204.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++...+.++.++.+|++|.++++++++++.+.+ +++|
T Consensus        30 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~id  108 (262)
T 3rkr_A           30 QVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAH-GRCD  108 (262)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH-SCCS
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhc-CCCC
Confidence            689999999999999999999999999999999999999988888778889999999999999999999999999 7999


Q ss_pred             EEEEcCCC-CCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAI-AFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      +||||||. ...+++.+.+.++|++++++|+.+++.++++++|+|.+++.++||++||..+..+.++...|++||+++++
T Consensus       109 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~  188 (262)
T 3rkr_A          109 VLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLNG  188 (262)
T ss_dssp             EEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTTCHHHHHHHHHHHH
T ss_pred             EEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCchHHHHHHHHHH
Confidence            99999998 45567888999999999999999999999999999998888999999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      |+++++.|+.+.||+|++|+||+++|++......             ..+..+..+|+|++++++|++++.+.+++|+++
T Consensus       189 l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-------------~~~~~~~~~p~dvA~~v~~l~s~~~~~~~g~~~  255 (262)
T 3rkr_A          189 LMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLSA-------------KKSALGAIEPDDIADVVALLATQADQSFISEVL  255 (262)
T ss_dssp             HHHHHHHHHGGGTCEEEEEEECCC-----------------------------CCCHHHHHHHHHHHHTCCTTCCEEEEE
T ss_pred             HHHHHHHHhhhcCcEEEEEecCCCcCCccccccc-------------ccccccCCCHHHHHHHHHHHhcCccccccCcEE
Confidence            9999999999999999999999999998754321             224556789999999999999999999999999


Q ss_pred             EeCCCc
Q 024994          240 CVDGGV  245 (259)
Q Consensus       240 ~~dgG~  245 (259)
                      ..+.+.
T Consensus       256 i~p~~~  261 (262)
T 3rkr_A          256 VRPTLK  261 (262)
T ss_dssp             EECCCC
T ss_pred             eccccC
Confidence            888764

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=3.8e-45  Score=301.20  Aligned_cols=241  Identities=30%  Similarity=0.437  Sum_probs=215.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+.++...+++... .++.++.+|++|.++++++++++.+.+ +++|
T Consensus         7 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id   84 (251)
T 1zk4_A            7 KVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP-DQIQFFQHDSSDEDGWTKLFDATEKAF-GPVS   84 (251)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT-TTEEEEECCTTCHHHHHHHHHHHHHHH-SSCC
T ss_pred             cEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcc-CceEEEECCCCCHHHHHHHHHHHHHHh-CCCC
Confidence            68999999999999999999999999999999998887776666432 578999999999999999999999999 7899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCC-CEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGN-GSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.+++.++|.|.+++. ++||++||..+..+.++...|++||++++.
T Consensus        85 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~  164 (251)
T 1zk4_A           85 TLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRI  164 (251)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCCCccchHHHHHHHH
Confidence            9999999887778888999999999999999999999999999988765 899999999999999999999999999999


Q ss_pred             HHHHHHHHHc--cCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcccc
Q 024994          160 LTKNLACEWA--KDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ  237 (259)
Q Consensus       160 ~~~~~a~e~~--~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~  237 (259)
                      |+++++.|+.  +.||++++++||+++|++.....    .......+....|.+++.+|+|+++++++++++...+++|+
T Consensus       165 ~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~  240 (251)
T 1zk4_A          165 MSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLP----GAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFATGS  240 (251)
T ss_dssp             HHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTST----THHHHHTSTTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcC----chhhhHHHhhcCCCCCCcCHHHHHHHHHHHcCcccccccCc
Confidence            9999999988  88999999999999999875431    11122224455688899999999999999999888899999


Q ss_pred             EEEeCCCcee
Q 024994          238 IICVDGGVTV  247 (259)
Q Consensus       238 ~l~~dgG~~~  247 (259)
                      .+.+|||.++
T Consensus       241 ~~~v~gG~~~  250 (251)
T 1zk4_A          241 EFVVDGGYTA  250 (251)
T ss_dssp             EEEESTTGGG
T ss_pred             EEEECCCccC
Confidence            9999999865

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=6.4e-46  Score=308.67  Aligned_cols=236  Identities=21%  Similarity=0.272  Sum_probs=210.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+.+++..      ..++.++++|++|.++++++++++.+.+ +++|
T Consensus        17 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD   89 (266)
T 3p19_A           17 KLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN------LPNTLCAQVDVTDKYTFDTAITRAEKIY-GPAD   89 (266)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTC------CTTEEEEECCTTCHHHHHHHHHHHHHHH-CSEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhh------cCCceEEEecCCCHHHHHHHHHHHHHHC-CCCC
Confidence            68999999999999999999999999999999987765432      2378899999999999999999999999 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.++++++|.|.+++.++||++||..+..+.++...|++||+++++|
T Consensus        90 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asK~a~~~~  169 (266)
T 3p19_A           90 AIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAI  169 (266)
T ss_dssp             EEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCCCchHHHHHHHHHHH
Confidence            99999999888889999999999999999999999999999999988889999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhh-cCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIAR-QTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      +++++.|++++||+||+|+||+++|++......    ......+.. ..|.+++++|+|++++++|+++....+.+++++
T Consensus       170 ~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~----~~~~~~~~~~~~~~~r~~~pedvA~av~~l~~~~~~~~~~~i~  245 (266)
T 3p19_A          170 SENVREEVAASNVRVMTIAPSAVKTELLSHTTS----QQIKDGYDAWRVDMGGVLAADDVARAVLFAYQQPQNVCIREIA  245 (266)
T ss_dssp             HHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSC----HHHHHHHHHHHHHTTCCBCHHHHHHHHHHHHHSCTTEEEEEEE
T ss_pred             HHHHHHHhcccCcEEEEEeeCccccchhhcccc----hhhhHHHHhhcccccCCCCHHHHHHHHHHHHcCCCCccceeeE
Confidence            999999999999999999999999999765432    112222222 347899999999999999999998889999988


Q ss_pred             EeCCCcee
Q 024994          240 CVDGGVTV  247 (259)
Q Consensus       240 ~~dgG~~~  247 (259)
                      ....++..
T Consensus       246 i~p~~~~~  253 (266)
T 3p19_A          246 LAPTKQQP  253 (266)
T ss_dssp             EEETTCCC
T ss_pred             EecCCCCC
Confidence            87776543

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=8.2e-47  Score=310.28  Aligned_cols=232  Identities=28%  Similarity=0.342  Sum_probs=204.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHH-CCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELAR-FGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||++|||++++++|++ .|++|++++|+.+..          ...+.++++|++|.++++++++.+.  + +++
T Consensus         5 k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~~~--~-~~i   71 (244)
T 4e4y_A            5 ANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS----------AENLKFIKADLTKQQDITNVLDIIK--N-VSF   71 (244)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC----------CTTEEEEECCTTCHHHHHHHHHHTT--T-CCE
T ss_pred             CeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc----------cccceEEecCcCCHHHHHHHHHHHH--h-CCC
Confidence            6899999999999999999999 789999999876521          2367899999999999999996553  5 689


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      |+||||||+....++.+.+.++|++++++|+.+++.++++++|.|.+.  ++||++||..+..+.++...|++||+++++
T Consensus        72 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--g~iv~~sS~~~~~~~~~~~~Y~asKaa~~~  149 (244)
T 4e4y_A           72 DGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVG--ASIVFNGSDQCFIAKPNSFAYTLSKGAIAQ  149 (244)
T ss_dssp             EEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEE--EEEEEECCGGGTCCCTTBHHHHHHHHHHHH
T ss_pred             CEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccC--cEEEEECCHHHccCCCCCchhHHHHHHHHH
Confidence            999999999888889999999999999999999999999999999664  899999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCC------CCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEG------PEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASY  233 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  233 (259)
                      |+++++.|++++||+||+|+||+++|++.......      ...+..........|.+++.+|+|++++++||+++.+.+
T Consensus       150 ~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~  229 (244)
T 4e4y_A          150 MTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLSDKSKF  229 (244)
T ss_dssp             HHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhcCcccc
Confidence            99999999999999999999999999986543211      111224555667789999999999999999999999999


Q ss_pred             ccccEEEeCCCcee
Q 024994          234 ITGQIICVDGGVTV  247 (259)
Q Consensus       234 ~~G~~l~~dgG~~~  247 (259)
                      +||+.|.+|||.++
T Consensus       230 itG~~i~vdGG~~~  243 (244)
T 4e4y_A          230 MTGGLIPIDGGYTA  243 (244)
T ss_dssp             CCSCEEEESTTGGG
T ss_pred             ccCCeEeECCCccC
Confidence            99999999999875

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=2e-45  Score=305.01  Aligned_cols=243  Identities=30%  Similarity=0.436  Sum_probs=208.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcC-------CcEEEEEecCCCHHHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG-------FKVTGSVCDLSSREQREKLIETVTS   73 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~~~~~~~~~~~   73 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+       .++.++++|++|.++++++++++.+
T Consensus         8 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   87 (264)
T 2pd6_A            8 ALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQVQA   87 (264)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHHHH
Confidence            689999999999999999999999999999999988877766554433       5688999999999999999999999


Q ss_pred             HcCCCc-cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccCCCCCChhhh
Q 024994           74 IFQGKL-NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYG  151 (259)
Q Consensus        74 ~~~~~i-d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~~~~~~~~Y~  151 (259)
                      .+ +++ |+||||||.....++.+.+.++|++++++|+.+++.+++++.|.|.+++ .++||++||..+..+.++...|+
T Consensus        88 ~~-g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  166 (264)
T 2pd6_A           88 CF-SRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYA  166 (264)
T ss_dssp             HH-SSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCTTBHHHH
T ss_pred             Hh-CCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCCCChhhH
Confidence            99 687 9999999998777888889999999999999999999999999998765 68999999999989999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCC
Q 024994          152 AYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAA  231 (259)
Q Consensus       152 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  231 (259)
                      +||++++.|+++++.++.++||++++++||+++|++......     .....+....|.+++.+|+|+++++++++++.+
T Consensus       167 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-----~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  241 (264)
T 2pd6_A          167 ASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQ-----KVVDKITEMIPMGHLGDPEDVADVVAFLASEDS  241 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC---------------CTGGGCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCH-----HHHHHHHHhCCCCCCCCHHHHHHHHHHHcCCcc
Confidence            999999999999999999999999999999999998754321     133444556788899999999999999999878


Q ss_pred             CCccccEEEeCCCceeee
Q 024994          232 SYITGQIICVDGGVTVTV  249 (259)
Q Consensus       232 ~~~~G~~l~~dgG~~~~~  249 (259)
                      .+++|+.+.+|||..++.
T Consensus       242 ~~~~G~~~~v~gg~~~~~  259 (264)
T 2pd6_A          242 GYITGTSVEVTGGLFMAE  259 (264)
T ss_dssp             TTCCSCEEEESTTC----
T ss_pred             cCCCCCEEEECCCceecc
Confidence            899999999999988754

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=4e-45  Score=301.61  Aligned_cols=243  Identities=32%  Similarity=0.482  Sum_probs=219.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+||||++++++|+++|++|++++|+.+.++...+++...+.++.++.+|++|.++++++++++.+.+ +++|
T Consensus        12 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~d   90 (255)
T 1fmc_A           12 KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL-GKVD   90 (255)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-SSCC
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhc-CCCC
Confidence            689999999999999999999999999999999998888888877666789999999999999999999999998 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||.....++ +.+.++|++.+++|+.+++.++++++|.|.+.+.++||++||..+..+.++...|++||++++.+
T Consensus        91 ~vi~~Ag~~~~~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~  169 (255)
T 1fmc_A           91 ILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHL  169 (255)
T ss_dssp             EEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCCcccHHHHHHHHHH
Confidence            99999998766665 67899999999999999999999999999887789999999999999989999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC  240 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~  240 (259)
                      +++++.++.+.||+++.++||+++|++.....    .+..........|.+++++|+|+++++++++++...+++|+.++
T Consensus       170 ~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~  245 (255)
T 1fmc_A          170 VRNMAFDLGEKNIRVNGIAPGAILTDALKSVI----TPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQILT  245 (255)
T ss_dssp             HHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC----CHHHHHHHHHTCSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHhhhcCcEEEEEecccCcchhhhhcc----ChHHHHHHHhcCCcccCCCHHHHHHHHHHHhCCccccCCCcEEE
Confidence            99999999999999999999999999764321    12244555667788999999999999999999878899999999


Q ss_pred             eCCCceeee
Q 024994          241 VDGGVTVTV  249 (259)
Q Consensus       241 ~dgG~~~~~  249 (259)
                      +|||...++
T Consensus       246 v~gg~~~s~  254 (255)
T 1fmc_A          246 VSGGGVQEL  254 (255)
T ss_dssp             ESTTSCCCC
T ss_pred             ECCceeccC
Confidence            999988764

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=1.7e-45  Score=302.51  Aligned_cols=241  Identities=32%  Similarity=0.512  Sum_probs=194.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEe-eCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTC-SRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||++|||++++++|+++|++|+++ +|+.+.+++..+++...+.++.++++|++|.++++++++++.+.+ +++
T Consensus         6 ~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~   84 (247)
T 2hq1_A            6 KTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAF-GRI   84 (247)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHH-SCC
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhc-CCC
Confidence            689999999999999999999999999999 677777777777776666789999999999999999999999998 689


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      |+||||||.....++.+.+.++|++++++|+.+++.++++++|.|.+++.++||++||..+..+.++...|++||++++.
T Consensus        85 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  164 (247)
T 2hq1_A           85 DILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGLIG  164 (247)
T ss_dssp             CEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------CHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcHhHHHHHHHHH
Confidence            99999999877677778889999999999999999999999999988778999999999999998999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      ++++++.|+.+.||++|.++||+++|++.....     ....+.+....|.+++.+|+|+++++++++++.+.+++|+.+
T Consensus       165 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~  239 (247)
T 2hq1_A          165 FTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLP-----DKVKEMYLNNIPLKRFGTPEEVANVVGFLASDDSNYITGQVI  239 (247)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC-----HHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHHHHcCcEEEEEEEEEEeccchhhcc-----hHHHHHHHhhCCCCCCCCHHHHHHHHHHHcCcccccccCcEE
Confidence            999999999999999999999999999764321     223444556678889999999999999999987889999999


Q ss_pred             EeCCCcee
Q 024994          240 CVDGGVTV  247 (259)
Q Consensus       240 ~~dgG~~~  247 (259)
                      ++|||.++
T Consensus       240 ~v~gG~~~  247 (247)
T 2hq1_A          240 NIDGGLVM  247 (247)
T ss_dssp             EESTTC--
T ss_pred             EeCCCccC
Confidence            99999753

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=4.4e-45  Score=304.51  Aligned_cols=234  Identities=22%  Similarity=0.235  Sum_probs=191.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++++|++|.++++++++++.+.+ +++|
T Consensus        29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD  104 (272)
T 4dyv_A           29 KIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI---GDDALCVPTDVTDPDSVRALFTATVEKF-GRVD  104 (272)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---TSCCEEEECCTTSHHHHHHHHHHHHHHH-SCCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence            68999999999999999999999999999999999988877776   3578899999999999999999999999 7999


Q ss_pred             EEEEcCCCCCC-CCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC--CCEEEEecCCCccCCCCCChhhhhhHHHH
Q 024994           81 ILINNAAIAFV-KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG--NGSIVFISSVGGVRGIPSVSLYGAYKGAM  157 (259)
Q Consensus        81 ~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~ii~isS~~~~~~~~~~~~Y~~sK~a~  157 (259)
                      +||||||.... .++.+.+.++|++++++|+.+++.++++++|.|.+++  .++||++||..+..+.++...|++||+++
T Consensus       105 ~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa~  184 (272)
T 4dyv_A          105 VLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAI  184 (272)
T ss_dssp             EEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTCHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCchHHHHHHHHH
Confidence            99999998654 6788899999999999999999999999999998875  68999999999999999999999999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcccc
Q 024994          158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ  237 (259)
Q Consensus       158 ~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~  237 (259)
                      ++|+++++.|++++||+||+|+||+++|++........      .......+.+++.+|+|++++++||++.......++
T Consensus       185 ~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~------~~~~~~~~~~~~~~pedvA~~v~fL~s~~~~~~~~~  258 (272)
T 4dyv_A          185 TGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAGV------PQADLSIKVEPVMDVAHVASAVVYMASLPLDANVQF  258 (272)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEEEECC------------------------------CHHHHHHHHHHHHHSCTTSCCCE
T ss_pred             HHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcccc------hhhhhcccccCCCCHHHHHHHHHHHhCCCCcCccce
Confidence            99999999999999999999999999999986553321      122234577889999999999999999766555554


Q ss_pred             EEEeCCC
Q 024994          238 IICVDGG  244 (259)
Q Consensus       238 ~l~~dgG  244 (259)
                      +.....+
T Consensus       259 i~i~~~~  265 (272)
T 4dyv_A          259 MTIMATK  265 (272)
T ss_dssp             EEEEEC-
T ss_pred             EEEeccC
Confidence            4433333

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=100.00  E-value=5.5e-47  Score=324.32  Aligned_cols=245  Identities=19%  Similarity=0.199  Sum_probs=207.5

Q ss_pred             CEEEEEcCcc--hHHHHHHHHHHHCCCEEEEeeCCh---------hHHHHHHHHHHh---cCCcEEEEEecCCCH--H--
Q 024994            1 MTALVTGGTR--GIGHATVEELARFGAIVHTCSRNQ---------IELDARLHEWKN---KGFKVTGSVCDLSSR--E--   62 (259)
Q Consensus         1 k~~lItG~s~--giG~~~a~~l~~~G~~V~~~~r~~---------~~~~~~~~~~~~---~~~~~~~~~~D~~~~--~--   62 (259)
                      |++||||+++  |||+++|++|+++|++|++++|+.         ++++........   ....+.++++|+++.  +  
T Consensus         3 k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~   82 (329)
T 3lt0_A            3 DICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTANDI   82 (329)
T ss_dssp             CEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGGC
T ss_pred             cEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhhh
Confidence            7999999986  999999999999999999777665         222221111111   123478889999988  7  


Q ss_pred             ----------------HHHHHHHHHHHHcCCCccEEEEcCCCC--CCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHh
Q 024994           63 ----------------QREKLIETVTSIFQGKLNILINNAAIA--FVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLF  124 (259)
Q Consensus        63 ----------------~~~~~~~~~~~~~~~~id~vi~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~  124 (259)
                                      +++++++++.+.+ +++|+||||||+.  ...++.+.+.++|++++++|+.+++.++++++|+|
T Consensus        83 ~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~-g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m  161 (329)
T 3lt0_A           83 DEETKNNKRYNMLQNYTIEDVANLIHQKY-GKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM  161 (329)
T ss_dssp             CHHHHTSHHHHTCCSCSHHHHHHHHHHHH-CCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             hhhhcccccccccCHHHHHHHHHHHHHhc-CCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence                            9999999999999 7999999999974  35688889999999999999999999999999999


Q ss_pred             HhCCCCEEEEecCCCccCCCCCCh-hhhhhHHHHHHHHHHHHHHHcc-CCceEEEEeCCceeCCCCCCCcCCC-------
Q 024994          125 KASGNGSIVFISSVGGVRGIPSVS-LYGAYKGAMNQLTKNLACEWAK-DNIRTNTVAPWVIKTSMIKPFEEGP-------  195 (259)
Q Consensus       125 ~~~~~~~ii~isS~~~~~~~~~~~-~Y~~sK~a~~~~~~~~a~e~~~-~gi~v~~v~pg~v~t~~~~~~~~~~-------  195 (259)
                      .++  |+||++||..+..+.+... .|++||+++.+|+++++.|+++ +||+||+|+||+++|++........       
T Consensus       162 ~~~--g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~  239 (329)
T 3lt0_A          162 KPQ--SSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNT  239 (329)
T ss_dssp             EEE--EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTCC----------
T ss_pred             hhC--CeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhhhhhcccccccc
Confidence            775  8999999999999999985 9999999999999999999998 8999999999999999976542110       


Q ss_pred             --------------------Cc-------------hHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEEeC
Q 024994          196 --------------------EG-------------SEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD  242 (259)
Q Consensus       196 --------------------~~-------------~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~~d  242 (259)
                                          ..             +...+.+....|.+|+.+|+|+|++++||+++.+.++||+.|.+|
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~fL~s~~a~~itG~~i~vd  319 (329)
T 3lt0_A          240 NQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAITGQTIYVD  319 (329)
T ss_dssp             --------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             cccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCcccCcCCHHHHHHHHHHHhCchhccccCcEEEEc
Confidence                                00             012556677889999999999999999999999999999999999


Q ss_pred             CCceee
Q 024994          243 GGVTVT  248 (259)
Q Consensus       243 gG~~~~  248 (259)
                      ||.++.
T Consensus       320 GG~~~~  325 (329)
T 3lt0_A          320 NGLNIM  325 (329)
T ss_dssp             TTGGGC
T ss_pred             CCeeEE
Confidence            999874

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=1.1e-44  Score=295.84  Aligned_cols=230  Identities=22%  Similarity=0.248  Sum_probs=207.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHH-hcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK-NKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++. ..+.++.++++|++|.++++++++++.+.+ +++
T Consensus         3 k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~i   81 (235)
T 3l77_A            3 KVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERF-GDV   81 (235)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHH-SSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhc-CCC
Confidence            789999999999999999999999999999999999988888776 446789999999999999999999999999 799


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      |+||||||.....++.+.+.++|++++++|+.+++.++++++|+|.+ +.+++|+++|..+..+.+....|++||+++++
T Consensus        82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~~~  160 (235)
T 3l77_A           82 DVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKR-TGGLALVTTSDVSARLIPYGGGYVSTKWAARA  160 (235)
T ss_dssp             SEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEECCGGGSSCCTTCHHHHHHHHHHHH
T ss_pred             CEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCcEEEEecchhcccCCCcchHHHHHHHHHH
Confidence            99999999988888999999999999999999999999999999954 46899999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      |+++++  +.+.||+||+|+||+++|++.........             ..++.+|+|++++++|++++...+++|+++
T Consensus       161 ~~~~l~--~~~~~i~v~~v~PG~v~T~~~~~~~~~~~-------------~~~~~~p~dva~~v~~l~~~~~~~~~~~~~  225 (235)
T 3l77_A          161 LVRTFQ--IENPDVRFFELRPGAVDTYFGGSKPGKPK-------------EKGYLKPDEIAEAVRCLLKLPKDVRVEELM  225 (235)
T ss_dssp             HHHHHH--HHCTTSEEEEEEECSBSSSTTTCCSCCCG-------------GGTCBCHHHHHHHHHHHHTSCTTCCCCEEE
T ss_pred             HHHHHh--hcCCCeEEEEEeCCccccccccccCCccc-------------ccCCCCHHHHHHHHHHHHcCCCCCccceEE
Confidence            999994  44679999999999999999876543221             126779999999999999999999999999


Q ss_pred             EeCCCcee
Q 024994          240 CVDGGVTV  247 (259)
Q Consensus       240 ~~dgG~~~  247 (259)
                      ..|+|+..
T Consensus       226 ~~~~~~~~  233 (235)
T 3l77_A          226 LRSVYQRP  233 (235)
T ss_dssp             ECCTTSCC
T ss_pred             EeecccCC
Confidence            99999753

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=5.5e-46  Score=307.91  Aligned_cols=239  Identities=23%  Similarity=0.244  Sum_probs=207.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHH---CCCEEEEeeCChhHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHH--
Q 024994            1 MTALVTGGTRGIGHATVEELAR---FGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTS--   73 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~---~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~--   73 (259)
                      |++|||||++|||++++++|++   +|++|++++|+.+.+++..+++...  +.++.++++|++|.++++++++++.+  
T Consensus         7 k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   86 (259)
T 1oaa_A            7 AVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELP   86 (259)
T ss_dssp             EEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSC
T ss_pred             cEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHhcc
Confidence            6899999999999999999999   8999999999999988888777653  55799999999999999999999988  


Q ss_pred             HcCCCcc--EEEEcCCCCCC--CCCCC-CCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC--CCCEEEEecCCCccCCCCC
Q 024994           74 IFQGKLN--ILINNAAIAFV--KPTVD-ITAEDMSTVSSTNFESVFHLSQLAHPLFKAS--GNGSIVFISSVGGVRGIPS  146 (259)
Q Consensus        74 ~~~~~id--~vi~~ag~~~~--~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~ii~isS~~~~~~~~~  146 (259)
                      .+ +++|  +||||||+...  .++.+ .+.++|++++++|+.+++.++++++|.|.++  +.++||++||..+..+.++
T Consensus        87 ~~-g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  165 (259)
T 1oaa_A           87 RP-EGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKG  165 (259)
T ss_dssp             CC-TTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCCTT
T ss_pred             cc-ccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCCCCC
Confidence            55 5788  99999998643  45677 6899999999999999999999999999876  5689999999999999999


Q ss_pred             ChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHH
Q 024994          147 VSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFL  226 (259)
Q Consensus       147 ~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  226 (259)
                      ...|++||+++++|+++++.|+.  +|+||+|+||+++|++..........+...+.+....|.+++.+|+|+++.++|+
T Consensus       166 ~~~Y~asKaa~~~~~~~la~e~~--~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l  243 (259)
T 1oaa_A          166 WGLYCAGKAARDMLYQVLAAEEP--SVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKLLGL  243 (259)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHCT--TEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHhhCC--CceEEEecCCCcCcchHHHHhhccCChhHHHHHHHhhhcCCcCCHHHHHHHHHHH
Confidence            99999999999999999999986  3999999999999998643221111122344455566788999999999999999


Q ss_pred             hCCCCCCccccEEEeCC
Q 024994          227 CLPAASYITGQIICVDG  243 (259)
Q Consensus       227 ~~~~~~~~~G~~l~~dg  243 (259)
                      +++ .+++||+.|.+||
T Consensus       244 ~~~-~~~itG~~i~vdg  259 (259)
T 1oaa_A          244 LQK-DTFQSGAHVDFYD  259 (259)
T ss_dssp             HHH-CCSCTTEEEETTC
T ss_pred             Hhh-ccccCCcEEeccC
Confidence            985 6899999999986

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=4.5e-45  Score=298.28  Aligned_cols=223  Identities=21%  Similarity=0.216  Sum_probs=191.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++..   ++.++++|++|.++++++++++.+.+ +++|
T Consensus         4 k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~~-g~id   79 (235)
T 3l6e_A            4 GHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGN---AVIGIVADLAHHEDVDVAFAAAVEWG-GLPE   79 (235)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG---GEEEEECCTTSHHHHHHHHHHHHHHH-CSCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcC---CceEEECCCCCHHHHHHHHHHHHHhc-CCCc
Confidence            6899999999999999999999999999999999998888777732   68999999999999999999999999 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.++++++|.|.+++ ++||++||..+..+.++...|++||+++++|
T Consensus        80 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~  158 (235)
T 3l6e_A           80 LVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQVGKANESLYCASKWGMRGF  158 (235)
T ss_dssp             EEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-EEEEEECCEECCSSCSSHHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHHhcCCCCCCcHHHHHHHHHHHH
Confidence            999999998778888999999999999999999999999999998764 5999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhC-CCCCCccccEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCL-PAASYITGQII  239 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~-~~~~~~~G~~l  239 (259)
                      +++++.|++++||+||+|+||+++|++......              .+.+++.+|+|+++.++|+++ +...+++|-.+
T Consensus       159 ~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~--------------~~~~~~~~pedvA~~v~~l~~~~~~~~i~~i~~  224 (235)
T 3l6e_A          159 LESLRAELKDSPLRLVNLYPSGIRSEFWDNTDH--------------VDPSGFMTPEDAAAYMLDALEARSSCHVTDLFI  224 (235)
T ss_dssp             HHHHHHHTTTSSEEEEEEEEEEECCCC-------------------------CBCHHHHHHHHHHHTCCCSSEEEEEEEE
T ss_pred             HHHHHHHhhccCCEEEEEeCCCccCcchhccCC--------------CCCcCCCCHHHHHHHHHHHHhCCCCcceeeEEE
Confidence            999999999999999999999999998754321              133478899999999999998 55678888655


Q ss_pred             EeC
Q 024994          240 CVD  242 (259)
Q Consensus       240 ~~d  242 (259)
                      .-.
T Consensus       225 ~~~  227 (235)
T 3l6e_A          225 GRN  227 (235)
T ss_dssp             EEC
T ss_pred             ecC
Confidence            443

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=4.3e-45  Score=301.38  Aligned_cols=238  Identities=34%  Similarity=0.487  Sum_probs=213.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcE-EEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKV-TGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||+||||++++++|+++|++|++++|+.+++++..+++   +.++ .++.+|++|.++++++++++.+ + +++
T Consensus        12 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~-~-~~i   86 (254)
T 2wsb_A           12 ACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL---GAAVAARIVADVTDAEAMTAAAAEAEA-V-APV   86 (254)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEEECCTTCHHHHHHHHHHHHH-H-SCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cccceeEEEEecCCHHHHHHHHHHHHh-h-CCC
Confidence            68999999999999999999999999999999998887776665   3356 8899999999999999999988 7 689


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCC--hhhhhhHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSV--SLYGAYKGAM  157 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~--~~Y~~sK~a~  157 (259)
                      |+||||||.....++.+.+.++|++++++|+.+++.++++++|.|.+++.++||++||..+..+.+..  ..|++||+++
T Consensus        87 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~sK~a~  166 (254)
T 2wsb_A           87 SILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAV  166 (254)
T ss_dssp             CEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCBHHHHHHHHHH
T ss_pred             cEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCCcchHHHHHHHHH
Confidence            99999999987778888999999999999999999999999999988778999999999988887777  8999999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcccc
Q 024994          158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ  237 (259)
Q Consensus       158 ~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~  237 (259)
                      +.++++++.++.++||+++.|+||+++|++......   .+.....+....|.+++.+|+|+++++++++++.+.+++|+
T Consensus       167 ~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~  243 (254)
T 2wsb_A          167 HQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRE---RPELFETWLDMTPMGRCGEPSEIAAAALFLASPAASYVTGA  243 (254)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHT---CHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHhhcCeEEEEEEecccCchhhhcccc---ChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccccccCC
Confidence            999999999999999999999999999998653321   12244555566788899999999999999999888899999


Q ss_pred             EEEeCCCce
Q 024994          238 IICVDGGVT  246 (259)
Q Consensus       238 ~l~~dgG~~  246 (259)
                      .+.+|||.+
T Consensus       244 ~~~v~gG~~  252 (254)
T 2wsb_A          244 ILAVDGGYT  252 (254)
T ss_dssp             EEEESTTGG
T ss_pred             EEEECCCEe
Confidence            999999975

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=5.6e-44  Score=298.45  Aligned_cols=245  Identities=25%  Similarity=0.371  Sum_probs=213.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+..++..+++.. ..++.++++|++|.++++++++++.+.+ +++|
T Consensus        17 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id   94 (278)
T 2bgk_A           17 KVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS-PDVISFVHCDVTKDEDVRNLVDTTIAKH-GKLD   94 (278)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCC-CCceEEEECCCCCHHHHHHHHHHHHHHc-CCCC
Confidence            6899999999999999999999999999999998887776666533 2378999999999999999999999999 7899


Q ss_pred             EEEEcCCCCCC--CCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCC-CChhhhhhHHHH
Q 024994           81 ILINNAAIAFV--KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIP-SVSLYGAYKGAM  157 (259)
Q Consensus        81 ~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~-~~~~Y~~sK~a~  157 (259)
                      +||||||....  .++.+.+.++|++++++|+.+++.++++++|.|.+++.++||++||..+..+.+ +...|++||+++
T Consensus        95 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~sK~a~  174 (278)
T 2bgk_A           95 IMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAV  174 (278)
T ss_dssp             EEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHHHHHH
T ss_pred             EEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCCCCcchHHHHHHH
Confidence            99999998643  567788999999999999999999999999999887789999999999988887 788999999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhc--CCCCCCCCHHHHHHHHHHHhCCCCCCcc
Q 024994          158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQ--TPIGRAGEPDEVSSLVAFLCLPAASYIT  235 (259)
Q Consensus       158 ~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~va~~~~~l~~~~~~~~~  235 (259)
                      ++++++++.|++++||+++.|+||+++|++.......  .......+...  .+.+++.+|+|+++++++++++.+.+++
T Consensus       175 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  252 (278)
T 2bgk_A          175 LGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGV--DSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKYVS  252 (278)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSC--CHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhccc--chhHHHHhhhcccccccccCCHHHHHHHHHHHcCcccccCC
Confidence            9999999999999999999999999999987654321  12223333332  3467899999999999999998888999


Q ss_pred             ccEEEeCCCceeee
Q 024994          236 GQIICVDGGVTVTV  249 (259)
Q Consensus       236 G~~l~~dgG~~~~~  249 (259)
                      |+.+++|||..++.
T Consensus       253 G~~~~v~gg~~~~~  266 (278)
T 2bgk_A          253 GLNLVIDGGYTRTN  266 (278)
T ss_dssp             SCEEEESTTGGGCC
T ss_pred             CCEEEECCcccccC
Confidence            99999999987754

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=2.1e-44  Score=304.70  Aligned_cols=244  Identities=27%  Similarity=0.425  Sum_probs=214.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++... +.++.++++|++|.++++++++++.+.+ +++
T Consensus        27 k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g~i  105 (302)
T 1w6u_A           27 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVA-GHP  105 (302)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHT-CSC
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHc-CCC
Confidence            68999999999999999999999999999999999888877777654 5679999999999999999999999998 799


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhH-hCCCCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFK-ASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      |+||||||.....++.+.+.++|++++++|+.+++.++++++|.|. +.+.++||++||..+..+.++...|++||++++
T Consensus       106 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~  185 (302)
T 1w6u_A          106 NIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVE  185 (302)
T ss_dssp             SEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCCcchhHHHHHHHH
Confidence            9999999987777888889999999999999999999999999997 445689999999999999899999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCC-CCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcccc
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTS-MIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ  237 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~  237 (259)
                      .|+++++.++.++||++++++||+++|+ +.......   ......+....|.+++.+|+|+++++++++++...+++|+
T Consensus       186 ~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~~~~~~p~~~~~~~~dva~~~~~l~~~~~~~~~G~  262 (302)
T 1w6u_A          186 AMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPT---GTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWINGA  262 (302)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECCBCC------CCTT---SHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTTCCSC
T ss_pred             HHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccc---hhhHHHHHhcCCcCCCCCHHHHHHHHHHHcCCcccccCCC
Confidence            9999999999999999999999999998 43332211   1122345566788999999999999999999888899999


Q ss_pred             EEEeCCCceee
Q 024994          238 IICVDGGVTVT  248 (259)
Q Consensus       238 ~l~~dgG~~~~  248 (259)
                      .+++|||..++
T Consensus       263 ~~~v~gg~~~~  273 (302)
T 1w6u_A          263 VIKFDGGEEVL  273 (302)
T ss_dssp             EEEESTTHHHH
T ss_pred             EEEECCCeeec
Confidence            99999998765

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=1.2e-44  Score=302.88  Aligned_cols=240  Identities=28%  Similarity=0.399  Sum_probs=213.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+..+...+++...+.++.++++|++|.++++++++++.+.+ +++|
T Consensus        35 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g~id  113 (279)
T 3ctm_A           35 KVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDF-GTID  113 (279)
T ss_dssp             CEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHH-SCCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHh-CCCC
Confidence            689999999999999999999999999999999887777666666556689999999999999999999999999 7899


Q ss_pred             EEEEcCCCCCC-CCCC-CCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCC--CCCChhhhhhHHH
Q 024994           81 ILINNAAIAFV-KPTV-DITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG--IPSVSLYGAYKGA  156 (259)
Q Consensus        81 ~vi~~ag~~~~-~~~~-~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~--~~~~~~Y~~sK~a  156 (259)
                      +||||||.... .++. +.+.++|++++++|+.+++.+++.++|.|.+++.++||++||..+..+  .++...|++||++
T Consensus       114 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~sK~a  193 (279)
T 3ctm_A          114 VFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTAKAA  193 (279)
T ss_dssp             EEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC---CCHHHHHHHHHH
T ss_pred             EEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCCCCcccHHHHHHH
Confidence            99999998765 6666 788999999999999999999999999998877899999999999888  7888999999999


Q ss_pred             HHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccc
Q 024994          157 MNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG  236 (259)
Q Consensus       157 ~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G  236 (259)
                      ++.|+++++.|+.+++ ++|+|+||+++|++....     .......+....|.+++.+|+|++++++|++++.+.+++|
T Consensus       194 ~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~-----~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG  267 (279)
T 3ctm_A          194 CTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFA-----SKDMKAKWWQLTPLGREGLTQELVGGYLYLASNASTFTTG  267 (279)
T ss_dssp             HHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSC-----CHHHHHHHHHHSTTCSCBCGGGTHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHhcccC-CEEEEeccCCcccccccc-----ChHHHHHHHHhCCccCCcCHHHHHHHHHHHhCccccCccC
Confidence            9999999999999999 999999999999987432     1223444556778899999999999999999988899999


Q ss_pred             cEEEeCCCcee
Q 024994          237 QIICVDGGVTV  247 (259)
Q Consensus       237 ~~l~~dgG~~~  247 (259)
                      +.+.+|||..+
T Consensus       268 ~~i~vdgG~~~  278 (279)
T 3ctm_A          268 SDVVIDGGYTC  278 (279)
T ss_dssp             CEEEESTTCCC
T ss_pred             CEEEECCCeec
Confidence            99999999764

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=1.1e-44  Score=297.81  Aligned_cols=227  Identities=29%  Similarity=0.360  Sum_probs=203.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcC-CcEEEEEecC--CCHHHHHHHHHHHHHHcCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG-FKVTGSVCDL--SSREQREKLIETVTSIFQG   77 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~--~~~~~~~~~~~~~~~~~~~   77 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++...+ .+..++.+|+  +|.++++++++++.+.+ +
T Consensus        15 k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~~-g   93 (247)
T 3i1j_A           15 RVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHEF-G   93 (247)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHHH-S
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHhC-C
Confidence            789999999999999999999999999999999999998888887654 4677777777  99999999999999999 7


Q ss_pred             CccEEEEcCCCC-CCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHH
Q 024994           78 KLNILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGA  156 (259)
Q Consensus        78 ~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  156 (259)
                      ++|+||||||.. ...++.+.+.++|++++++|+.+++.++++++|+|.+++.++||++||..+..+.+++..|++||++
T Consensus        94 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  173 (247)
T 3i1j_A           94 RLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVSKFA  173 (247)
T ss_dssp             CCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCCcchhHHHHHH
Confidence            999999999985 4567888999999999999999999999999999988888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHcc-CCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcc
Q 024994          157 MNQLTKNLACEWAK-DNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT  235 (259)
Q Consensus       157 ~~~~~~~~a~e~~~-~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~  235 (259)
                      +++|+++++.|+.+ .||+||+|+||+++|++........             +..+..+|+|+++.++||+++++.++|
T Consensus       174 ~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~~~~~-------------~~~~~~~p~dva~~~~~l~s~~~~~it  240 (247)
T 3i1j_A          174 TEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAYPDE-------------NPLNNPAPEDIMPVYLYLMGPDSTGIN  240 (247)
T ss_dssp             HHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHHSTTS-------------CGGGSCCGGGGTHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhccccc-------------CccCCCCHHHHHHHHHHHhCchhcccc
Confidence            99999999999976 7999999999999999764322211             123456899999999999999999999


Q ss_pred             ccEEEe
Q 024994          236 GQIICV  241 (259)
Q Consensus       236 G~~l~~  241 (259)
                      |+.|++
T Consensus       241 G~~i~~  246 (247)
T 3i1j_A          241 GQALNA  246 (247)
T ss_dssp             SCEEEC
T ss_pred             CeeecC
Confidence            999986

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=1.6e-44  Score=296.83  Aligned_cols=239  Identities=36%  Similarity=0.464  Sum_probs=215.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKN-KGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||++|||++++++|+++|++|++++|+.++++...+++.. .+.++.++.+|++|.++++++++++.+.+ +++
T Consensus         8 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~   86 (248)
T 2pnf_A            8 KVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLV-DGI   86 (248)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHS-SCC
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhc-CCC
Confidence            6899999999999999999999999999999999888877776654 35678999999999999999999999999 789


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      |+||||||.....++.+.+.++|++++++|+.+++.+++.++|.|.+++.++||++||..+..+.++...|++||++++.
T Consensus        87 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  166 (248)
T 2pnf_A           87 DILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIG  166 (248)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCCCchHHHHHHHHHH
Confidence            99999999887777788899999999999999999999999999988777999999999888888899999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      ++++++.++.+.||+++.++||+++|++.....     ......+....|.+++.+|+|+++++++++++...+++|+.+
T Consensus       167 ~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~  241 (248)
T 2pnf_A          167 FTKSLAKELAPRNVLVNAVAPGFIETDMTAVLS-----EEIKQKYKEQIPLGRFGSPEEVANVVLFLCSELASYITGEVI  241 (248)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSC-----HHHHHHHHHTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHhcccCeEEEEEEeceecCchhhhcc-----HHHHHHHHhcCCCCCccCHHHHHHHHHHHhCchhhcCCCcEE
Confidence            999999999999999999999999999875421     223344555678889999999999999999987789999999


Q ss_pred             EeCCCc
Q 024994          240 CVDGGV  245 (259)
Q Consensus       240 ~~dgG~  245 (259)
                      .+|||.
T Consensus       242 ~v~gg~  247 (248)
T 2pnf_A          242 HVNGGM  247 (248)
T ss_dssp             EESTTC
T ss_pred             EeCCCc
Confidence            999996

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=2.1e-44  Score=299.08  Aligned_cols=237  Identities=26%  Similarity=0.391  Sum_probs=205.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++   +.++.++++|++|.++++++++++.+.+ +++|
T Consensus        13 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~id   88 (265)
T 2o23_A           13 LVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL---GNNCVFAPADVTSEKDVQTALALAKGKF-GRVD   88 (265)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHC-CCCC
Confidence            68999999999999999999999999999999998887776665   4578999999999999999999999999 7899


Q ss_pred             EEEEcCCCCCCCCCC------CCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC------CCCEEEEecCCCccCCCCCCh
Q 024994           81 ILINNAAIAFVKPTV------DITAEDMSTVSSTNFESVFHLSQLAHPLFKAS------GNGSIVFISSVGGVRGIPSVS  148 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~------~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~~~~ii~isS~~~~~~~~~~~  148 (259)
                      +||||||.....+..      +.+.++|++++++|+.+++.+++++.|.|.++      +.++||++||..+..+.++..
T Consensus        89 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~  168 (265)
T 2o23_A           89 VAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQA  168 (265)
T ss_dssp             EEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCH
T ss_pred             EEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCCCCCc
Confidence            999999987655444      37899999999999999999999999999876      678999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCC-CCCCCHHHHHHHHHHHh
Q 024994          149 LYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPI-GRAGEPDEVSSLVAFLC  227 (259)
Q Consensus       149 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~  227 (259)
                      .|++||+++++|+++++.|+.++||++|+|+||+++|++.......     ....+....|. +++.+|+|+++.++|++
T Consensus       169 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~dva~~~~~l~  243 (265)
T 2o23_A          169 AYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEK-----VCNFLASQVPFPSRLGDPAEYAHLVQAII  243 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC---------------CHHHHTCSSSCSCBCHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCHH-----HHHHHHHcCCCcCCCCCHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999987643221     22334455677 88999999999999999


Q ss_pred             CCCCCCccccEEEeCCCceee
Q 024994          228 LPAASYITGQIICVDGGVTVT  248 (259)
Q Consensus       228 ~~~~~~~~G~~l~~dgG~~~~  248 (259)
                      +  +.+++|+.+.+|||.++.
T Consensus       244 ~--~~~~~G~~i~vdgG~~~~  262 (265)
T 2o23_A          244 E--NPFLNGEVIRLDGAIRMQ  262 (265)
T ss_dssp             H--CTTCCSCEEEESTTCCCC
T ss_pred             h--cCccCceEEEECCCEecC
Confidence            5  578999999999998764

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=1.3e-44  Score=296.91  Aligned_cols=240  Identities=35%  Similarity=0.493  Sum_probs=215.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEe-eCChhHHHHHHHHHHhcCCcEEE-EEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTC-SRNQIELDARLHEWKNKGFKVTG-SVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~-~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||+||||++++++|+++|++|+++ +|+.+.+++..+++...+.++.+ +.+|++|.++++++++++.+.+ ++
T Consensus         2 k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~   80 (245)
T 2ph3_A            2 RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVL-GG   80 (245)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHH-TC
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhc-CC
Confidence            789999999999999999999999999998 89998888877777666666666 8999999999999999999999 78


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      +|+||||||.....++.+.+.++|++++++|+.+++.+++.++|.|.+.+.++||++||..+..+.++...|++||++++
T Consensus        81 ~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  160 (245)
T 2ph3_A           81 LDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGLI  160 (245)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSSBHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCCCcchHHHHHHHH
Confidence            99999999988777788889999999999999999999999999998877799999999998888899999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI  238 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~  238 (259)
                      +++++++.++.++||+++.++||+++|++.....     ......+....|.+++.+|+|+++++++++++...+++|++
T Consensus       161 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~  235 (245)
T 2ph3_A          161 GFTRAVAKEYAQRGITVNAVAPGFIETEMTERLP-----QEVKEAYLKQIPAGRFGRPEEVAEAVAFLVSEKAGYITGQT  235 (245)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC-----HHHHHHHHHTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcC-----HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccccccCCE
Confidence            9999999999999999999999999999865421     22344455667888999999999999999998778999999


Q ss_pred             EEeCCCce
Q 024994          239 ICVDGGVT  246 (259)
Q Consensus       239 l~~dgG~~  246 (259)
                      +.+|||..
T Consensus       236 ~~v~gg~~  243 (245)
T 2ph3_A          236 LCVDGGLT  243 (245)
T ss_dssp             EEESTTCS
T ss_pred             EEECCCCC
Confidence            99999964

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=4.3e-45  Score=302.73  Aligned_cols=240  Identities=23%  Similarity=0.285  Sum_probs=198.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH-cCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSI-FQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~~i   79 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++++|++|.++++++++++.+. + +++
T Consensus         6 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~-g~i   84 (260)
T 2qq5_A            6 QVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQ-GRL   84 (260)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHT-TCC
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcC-CCc
Confidence            78999999999999999999999999999999999888888877666678999999999999999999999886 7 789


Q ss_pred             cEEEEcCC--CC-----CCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhh
Q 024994           80 NILINNAA--IA-----FVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGA  152 (259)
Q Consensus        80 d~vi~~ag--~~-----~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~  152 (259)
                      |+||||||  ..     ...++.+.+.++|++++++|+.+++.+++.++|.|.+++.++||++||..+..+. +...|++
T Consensus        85 d~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-~~~~Y~a  163 (260)
T 2qq5_A           85 DVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYM-FNVPYGV  163 (260)
T ss_dssp             CEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCC-SSHHHHH
T ss_pred             eEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCC-CCCchHH
Confidence            99999995  32     2456778889999999999999999999999999988778999999999887654 4689999


Q ss_pred             hHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhh-hcCCCCCCCCHHHHHHHHHHHhCCCC
Q 024994          153 YKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIA-RQTPIGRAGEPDEVSSLVAFLCLPAA  231 (259)
Q Consensus       153 sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~va~~~~~l~~~~~  231 (259)
                      ||+++++|+++++.|++++||+||+|+||+++|++........... ...... ...|.++..+|+|++++++||+++.+
T Consensus       164 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~pe~va~~v~~l~s~~~  242 (260)
T 2qq5_A          164 GKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVL-QDPVLKQFKSAFSSAETTELSGKCVVALATDPN  242 (260)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC-----------------------CHHHHHHHHHHHHHHHHTCTT
T ss_pred             HHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhcccccc-chhHHHHHHhhhccCCCHHHHHHHHHHHhcCcc
Confidence            9999999999999999999999999999999999875432211100 000011 12355667789999999999999876


Q ss_pred             -CCccccEEEeCC
Q 024994          232 -SYITGQIICVDG  243 (259)
Q Consensus       232 -~~~~G~~l~~dg  243 (259)
                       .++||++|.+|+
T Consensus       243 ~~~itG~~i~~~~  255 (260)
T 2qq5_A          243 ILSLSGKVLPSCD  255 (260)
T ss_dssp             GGGGTTCEEEHHH
T ss_pred             cccccceeechhh
Confidence             489999998873

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=1.6e-44  Score=299.67  Aligned_cols=241  Identities=31%  Similarity=0.440  Sum_probs=211.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKN-KGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+..++..+++.. .+.++.++++|++|.++++++++++.+.+ +++
T Consensus        15 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~i   93 (265)
T 1h5q_A           15 KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL-GPI   93 (265)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHS-CSE
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhc-CCC
Confidence            5899999999999999999999999999999977666555555533 25578999999999999999999999998 789


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccCCCCC-------Chhhh
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPS-------VSLYG  151 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~~~~~-------~~~Y~  151 (259)
                      |+||||||.....++.+.+.++|++++++|+.+++.++++++|.|.+++ .++||++||..+..+.+.       ...|+
T Consensus        94 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~Y~  173 (265)
T 1h5q_A           94 SGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYN  173 (265)
T ss_dssp             EEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSCHHHH
T ss_pred             CEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccccccccccccccH
Confidence            9999999998777888899999999999999999999999999998754 489999999888766542       78999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCC
Q 024994          152 AYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAA  231 (259)
Q Consensus       152 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  231 (259)
                      +||+++++|+++++.|+.++||++++|+||+++|++.....     +.....+....|.+++.+|+|++++++|++++.+
T Consensus       174 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  248 (265)
T 1h5q_A          174 SSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMD-----KKIRDHQASNIPLNRFAQPEEMTGQAILLLSDHA  248 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSC-----HHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccc-----hhHHHHHHhcCcccCCCCHHHHHHHHHhhccCch
Confidence            99999999999999999999999999999999999876431     2234455566788999999999999999999888


Q ss_pred             CCccccEEEeCCCcee
Q 024994          232 SYITGQIICVDGGVTV  247 (259)
Q Consensus       232 ~~~~G~~l~~dgG~~~  247 (259)
                      .+++|+.+.+|||+++
T Consensus       249 ~~~~G~~~~v~gG~~~  264 (265)
T 1h5q_A          249 TYMTGGEYFIDGGQLI  264 (265)
T ss_dssp             TTCCSCEEEECTTGGG
T ss_pred             hcCcCcEEEecCCEeC
Confidence            8999999999999764

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=4.8e-45  Score=305.69  Aligned_cols=235  Identities=23%  Similarity=0.282  Sum_probs=199.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF-KVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...+. .+.++++|++|.++++++++++.+.+ +++
T Consensus        34 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~i  112 (281)
T 4dry_A           34 RIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEF-ARL  112 (281)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH-SCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHc-CCC
Confidence            6899999999999999999999999999999999999888888765433 45899999999999999999999999 799


Q ss_pred             cEEEEcCCCCCC-CCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC--CCEEEEecCCCccCCCCCChhhhhhHHH
Q 024994           80 NILINNAAIAFV-KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG--NGSIVFISSVGGVRGIPSVSLYGAYKGA  156 (259)
Q Consensus        80 d~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~ii~isS~~~~~~~~~~~~Y~~sK~a  156 (259)
                      |+||||||.... .++.+.+.++|++++++|+.+++.++++++|.|.+++  .++||++||..+..+.++...|++||++
T Consensus       113 D~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa  192 (281)
T 4dry_A          113 DLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHA  192 (281)
T ss_dssp             SEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTTCHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCCChhHHHHHHH
Confidence            999999998654 6788899999999999999999999999999998875  6899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCC-CCcc
Q 024994          157 MNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAA-SYIT  235 (259)
Q Consensus       157 ~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~-~~~~  235 (259)
                      +++|+++++.|++++||+||+|+||+++|++........      .......+.+++.+|+|+|++++||++... ..++
T Consensus       193 ~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~------~~~~~~~~~~~~~~pedvA~~v~fL~s~~~~~~i~  266 (281)
T 4dry_A          193 ITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTGV------LQANGEVAAEPTIPIEHIAEAVVYMASLPLSANVL  266 (281)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CEE------ECTTSCEEECCCBCHHHHHHHHHHHHHSCTTEEEE
T ss_pred             HHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcchh------hhhhhcccccCCCCHHHHHHHHHHHhCCCccCccc
Confidence            999999999999999999999999999999986543211      111233456788999999999999999554 3455


Q ss_pred             ccEEEeC
Q 024994          236 GQIICVD  242 (259)
Q Consensus       236 G~~l~~d  242 (259)
                      +..+...
T Consensus       267 ~~~i~p~  273 (281)
T 4dry_A          267 TMTVMAT  273 (281)
T ss_dssp             EEEEEET
T ss_pred             cEEEEec
Confidence            5444433

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=100.00  E-value=2.9e-44  Score=294.77  Aligned_cols=235  Identities=32%  Similarity=0.465  Sum_probs=206.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++.    ...++++|++|.++++++++    .+ +++|
T Consensus         8 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~----~~-~~id   78 (244)
T 3d3w_A            8 RRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP----GIEPVCVDLGDWEATERALG----SV-GPVD   78 (244)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHT----TC-CCCC
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC----CCCEEEEeCCCHHHHHHHHH----Hc-CCCC
Confidence            689999999999999999999999999999999888776655432    35667999999999988876    34 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.+++++.|.|.+++ .++||++||..+..+.++...|++||++++.
T Consensus        79 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  158 (244)
T 3d3w_A           79 LLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDM  158 (244)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred             EEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCCCchHHHHHHHHHH
Confidence            999999988777888889999999999999999999999999998766 6999999999999998999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      ++++++.|++++||+++.|+||+++|++.......+.   ....+....|.+++.+|+|+++++++++++.+.+++|+++
T Consensus       159 ~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~  235 (244)
T 3d3w_A          159 LTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPH---KAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGSTL  235 (244)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTT---HHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHhcccCeEEEEEEeccccccchhhhccChH---HHHHHHhhCCCCCCcCHHHHHHHHHHHcCccccCCCCCEE
Confidence            9999999999999999999999999998653222111   3345556678899999999999999999987789999999


Q ss_pred             EeCCCcee
Q 024994          240 CVDGGVTV  247 (259)
Q Consensus       240 ~~dgG~~~  247 (259)
                      ++|||.++
T Consensus       236 ~v~gG~~~  243 (244)
T 3d3w_A          236 PVEGGFWA  243 (244)
T ss_dssp             EESTTGGG
T ss_pred             EECCCccC
Confidence            99999765

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=6.6e-44  Score=301.78  Aligned_cols=246  Identities=36%  Similarity=0.520  Sum_probs=215.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHh-----cCCcEEEEEecCCCHHHHHHHHHHHHHHc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKN-----KGFKVTGSVCDLSSREQREKLIETVTSIF   75 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+.++...+++..     .+.++.++++|++|.++++++++++.+.+
T Consensus        19 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   98 (303)
T 1yxm_A           19 QVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTF   98 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHHHc
Confidence            6899999999999999999999999999999999988888887765     35679999999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHH
Q 024994           76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKG  155 (259)
Q Consensus        76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~  155 (259)
                       +++|+||||||.....++.+.+.++|++++++|+.+++.++++++|.+.+.+.++||++||.. ..+.+....|+++|+
T Consensus        99 -g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~~~~~~Y~~sK~  176 (303)
T 1yxm_A           99 -GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGFPLAVHSGAARA  176 (303)
T ss_dssp             -SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCCTTCHHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccCCCcchhhHHHHH
Confidence             789999999998777778888999999999999999999999999966555579999999988 788888999999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcc
Q 024994          156 AMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT  235 (259)
Q Consensus       156 a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~  235 (259)
                      ++++++++++.++.++||++++|+||+++|++....... .............|.+++.+|+|++++++|++++.+.+++
T Consensus       177 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~~~~~~~~~  255 (303)
T 1yxm_A          177 GVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGS-WGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAASFIT  255 (303)
T ss_dssp             HHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGG-GGGGGGTTGGGGSTTSSCBCTHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccc-cchHHHHHHHhcCcccCCCCHHHHHHHHHHHhCcccccCC
Confidence            999999999999999999999999999999953211110 0111233445567888999999999999999998889999


Q ss_pred             ccEEEeCCCceeee
Q 024994          236 GQIICVDGGVTVTV  249 (259)
Q Consensus       236 G~~l~~dgG~~~~~  249 (259)
                      |+.+.+|||..+..
T Consensus       256 G~~~~v~gG~~~~~  269 (303)
T 1yxm_A          256 GQSVDVDGGRSLYT  269 (303)
T ss_dssp             SCEEEESTTGGGCB
T ss_pred             CcEEEECCCeeccc
Confidence            99999999987754

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=2.9e-44  Score=295.82  Aligned_cols=235  Identities=22%  Similarity=0.286  Sum_probs=196.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++.   .++.++++|++|.++++++++++.+.+ +++|
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD   76 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG---DNLYIAQLDVRNRAAIEEMLASLPAEW-CNID   76 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---TTEEEEECCTTCHHHHHHHHHTSCTTT-CCCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---CceEEEEcCCCCHHHHHHHHHHHHHhC-CCCC
Confidence            799999999999999999999999999999999988877766653   478899999999999999999998888 6899


Q ss_pred             EEEEcCCCCC-CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      +||||||+.. ..++.+.+.++|++++++|+.+++.++++++|+|.+++.++||++||..+..+.++...|++||+++++
T Consensus        77 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~  156 (248)
T 3asu_A           77 ILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQ  156 (248)
T ss_dssp             EEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred             EEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCCCchHHHHHHHHHH
Confidence            9999999863 567788899999999999999999999999999987778999999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCcee-CCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIK-TSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI  238 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~  238 (259)
                      |+++++.|++++||+||+|+||+++ |++......... . .....   .......+|+|++++++|++++ ..+++|+.
T Consensus       157 ~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~~-~-~~~~~---~~~~~~~~p~dvA~~v~~l~s~-~~~~~g~~  230 (248)
T 3asu_A          157 FSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDD-G-KAEKT---YQNTVALTPEDVSEAVWWVSTL-PAHVNINT  230 (248)
T ss_dssp             HHHHHHHHTTTSCCEEEEEEECSBCC---------------------------CCBCHHHHHHHHHHHHHS-CTTCCCCE
T ss_pred             HHHHHHHHhhhcCcEEEEEeccccccCcchhhcccCch-H-HHHHH---HhccCCCCHHHHHHHHHHHhcC-CccceeeE
Confidence            9999999999999999999999999 998643211000 0 11110   1112346899999999999996 57899999


Q ss_pred             EEeCCCc
Q 024994          239 ICVDGGV  245 (259)
Q Consensus       239 l~~dgG~  245 (259)
                      +.++++.
T Consensus       231 i~v~~~~  237 (248)
T 3asu_A          231 LEMMPVT  237 (248)
T ss_dssp             EEECCTT
T ss_pred             EEEcccc
Confidence            9999874

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=1.6e-44  Score=320.38  Aligned_cols=237  Identities=27%  Similarity=0.334  Sum_probs=204.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhH--HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE--LDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||++|||++++++|+++|++|++++|+...  +++..+++     .+.++.+|++|.++++++++++.+.++++
T Consensus       214 k~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~-----~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~  288 (454)
T 3u0b_A          214 KVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKV-----GGTALTLDVTADDAVDKITAHVTEHHGGK  288 (454)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHH-----TCEEEECCTTSTTHHHHHHHHHHHHSTTC
T ss_pred             CEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc-----CCeEEEEecCCHHHHHHHHHHHHHHcCCC
Confidence            689999999999999999999999999999997532  23333222     35688999999999999999999999445


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      +|+||||||+....++.+.+.++|++++++|+.+++++.+++.|.|.+++.++||++||..+..+.+++..|++||++++
T Consensus       289 id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~~~YaasKaal~  368 (454)
T 3u0b_A          289 VDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKAGMI  368 (454)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTCHHHHHHHHHHH
T ss_pred             ceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCCHHHHHHHHHHH
Confidence            99999999998888889999999999999999999999999999998877899999999999999999999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI  238 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~  238 (259)
                      +|+++++.|+.++||+||+|+||+++|++........     .+......+.++.++|+|+++++.||+++.+.++||++
T Consensus       369 ~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~-----~~~~~~~~~l~r~g~pedvA~~v~fL~s~~a~~itG~~  443 (454)
T 3u0b_A          369 GLAEALAPVLADKGITINAVAPGFIETKMTEAIPLAT-----REVGRRLNSLFQGGQPVDVAELIAYFASPASNAVTGNT  443 (454)
T ss_dssp             HHHHHHHHHHHTTTCEEEEEEECSBCC---------------CHHHHHSBTTSSCBCHHHHHHHHHHHHCGGGTTCCSCE
T ss_pred             HHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhh-----HHHHHhhccccCCCCHHHHHHHHHHHhCCccCCCCCcE
Confidence            9999999999999999999999999999986543321     12234456788999999999999999999999999999


Q ss_pred             EEeCCCcee
Q 024994          239 ICVDGGVTV  247 (259)
Q Consensus       239 l~~dgG~~~  247 (259)
                      |.+|||..+
T Consensus       444 i~vdGG~~l  452 (454)
T 3u0b_A          444 IRVCGQAML  452 (454)
T ss_dssp             EEESSSBSC
T ss_pred             EEECCcccc
Confidence            999999875

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.6e-44  Score=301.19  Aligned_cols=238  Identities=23%  Similarity=0.319  Sum_probs=200.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++... .++.++++|++|.++++++++++.+.+ +++|
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD   99 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK-TRVLPLTLDVRDRAAMSAAVDNLPEEF-ATLR   99 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT-SCEEEEECCTTCHHHHHHHHHTCCGGG-SSCC
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHh-CCCC
Confidence            78999999999999999999999999999999999888877777543 578899999999999999999998888 7999


Q ss_pred             EEEEcCCCCCC-CCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCC-EEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           81 ILINNAAIAFV-KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNG-SIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        81 ~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~-~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      +||||||+... .++.+.+.++|++++++|+.+++.++++++|.|.+++.+ +||++||..+..+.++...|++||++++
T Consensus       100 ~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~~~~Y~asKaa~~  179 (272)
T 2nwq_A          100 GLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVE  179 (272)
T ss_dssp             EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCCCchHHHHHHHHH
Confidence            99999998754 678889999999999999999999999999999887778 9999999999999999999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI  238 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~  238 (259)
                      +|+++++.|++++||+||+|+||+++|++......... . ...   .........+|+|++++++|++++ ..+++|+.
T Consensus       180 ~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~-~-~~~---~~~~~~~~~~pedvA~~v~~l~s~-~~~~~g~~  253 (272)
T 2nwq_A          180 QFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQ-A-RYD---KTYAGAHPIQPEDIAETIFWIMNQ-PAHLNINS  253 (272)
T ss_dssp             HHHHHHHTTCTTSCCEEEEEEECSBC-------------------------CCCCBCHHHHHHHHHHHHTS-CTTEEEEE
T ss_pred             HHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccch-H-HHH---HhhccCCCCCHHHHHHHHHHHhCC-CccCccce
Confidence            99999999999999999999999999998643211100 0 011   111112357999999999999986 57899999


Q ss_pred             EEeCCCce
Q 024994          239 ICVDGGVT  246 (259)
Q Consensus       239 l~~dgG~~  246 (259)
                      +.+|+|..
T Consensus       254 i~v~~~~~  261 (272)
T 2nwq_A          254 LEIMPVSQ  261 (272)
T ss_dssp             EEEEETTE
T ss_pred             EEEeeccC
Confidence            99998854

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=1.7e-44  Score=298.24  Aligned_cols=240  Identities=30%  Similarity=0.449  Sum_probs=214.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCC-hhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRN-QIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||+||||++++++|+++|++|++++|+ .+.+++..+++...+.++.++.+|++|.++++++++++.+.+ +++
T Consensus         8 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~i   86 (258)
T 3afn_B            8 KRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKF-GGI   86 (258)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH-SSC
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc-CCC
Confidence            689999999999999999999999999999999 788888777777667789999999999999999999999999 789


Q ss_pred             cEEEEcCCC-CCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC--C---CEEEEecCCCccC-CCCCChhhhh
Q 024994           80 NILINNAAI-AFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG--N---GSIVFISSVGGVR-GIPSVSLYGA  152 (259)
Q Consensus        80 d~vi~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~---~~ii~isS~~~~~-~~~~~~~Y~~  152 (259)
                      |+||||||. ....++.+.+.++|++++++|+.+++.++++++|.|.+++  .   ++||++||..+.. +.++...|++
T Consensus        87 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~  166 (258)
T 3afn_B           87 DVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGA  166 (258)
T ss_dssp             SEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCTTCHHHHH
T ss_pred             CEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCCCchHHHH
Confidence            999999998 6666778889999999999999999999999999997643  3   8999999998887 7888999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCC
Q 024994          153 YKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAAS  232 (259)
Q Consensus       153 sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  232 (259)
                      ||++++.++++++.++.++||+++.|+||+++|++....     .+.....+....|.+++.+|+|+++++++++++...
T Consensus       167 sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~-----~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~  241 (258)
T 3afn_B          167 AKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADK-----TQDVRDRISNGIPMGRFGTAEEMAPAFLFFASHLAS  241 (258)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTC-----CHHHHHHHHTTCTTCSCBCGGGTHHHHHHHHCHHHH
T ss_pred             HHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccccccc-----CHHHHHHHhccCCCCcCCCHHHHHHHHHHHhCcchh
Confidence            999999999999999999999999999999999987543     122445556677888999999999999999987666


Q ss_pred             -CccccEEEeCCCce
Q 024994          233 -YITGQIICVDGGVT  246 (259)
Q Consensus       233 -~~~G~~l~~dgG~~  246 (259)
                       +++|+.+++|||..
T Consensus       242 ~~~~G~~~~v~gg~~  256 (258)
T 3afn_B          242 GYITGQVLDINGGQY  256 (258)
T ss_dssp             TTCCSEEEEESTTSS
T ss_pred             ccccCCEEeECCCcc
Confidence             89999999999974

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=100.00  E-value=1.4e-44  Score=293.01  Aligned_cols=216  Identities=27%  Similarity=0.372  Sum_probs=194.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+                    +|++|.++++++++++     +++|
T Consensus         7 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------------------~D~~~~~~v~~~~~~~-----g~id   61 (223)
T 3uce_A            7 TVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--------------------LDISDEKSVYHYFETI-----GAFD   61 (223)
T ss_dssp             EEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT--------------------CCTTCHHHHHHHHHHH-----CSEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc--------------------cCCCCHHHHHHHHHHh-----CCCC
Confidence            68999999999999999999999999999999765                    8999999999998765     7899


Q ss_pred             EEEEcCCCC-CCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      +||||||.. ...++.+.+.++|++++++|+.+++.++++++|+|++  .++||++||..+..+.++...|++||+++++
T Consensus        62 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~Y~asK~a~~~  139 (223)
T 3uce_A           62 HLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ--GGSITLTSGMLSRKVVANTYVKAAINAAIEA  139 (223)
T ss_dssp             EEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE--EEEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC--CeEEEEecchhhccCCCCchHHHHHHHHHHH
Confidence            999999987 5678889999999999999999999999999999965  4899999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      |+++++.|+.+  ||||+|+||+++|++....... ......+.+....|.+++.+|+|++++++|+++  +.+++|+.|
T Consensus       140 ~~~~la~e~~~--i~vn~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~--~~~~tG~~i  214 (223)
T 3uce_A          140 TTKVLAKELAP--IRVNAISPGLTKTEAYKGMNAD-DRDAMYQRTQSHLPVGKVGEASDIAMAYLFAIQ--NSYMTGTVI  214 (223)
T ss_dssp             HHHHHHHHHTT--SEEEEEEECSBCSGGGTTSCHH-HHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHH--CTTCCSCEE
T ss_pred             HHHHHHHhhcC--cEEEEEEeCCCcchhhhhcchh-hHHHHHHHHhhcCCCCCccCHHHHHHHHHHHcc--CCCCCCcEE
Confidence            99999999976  9999999999999988654321 112244566778899999999999999999997  479999999


Q ss_pred             EeCCCceee
Q 024994          240 CVDGGVTVT  248 (259)
Q Consensus       240 ~~dgG~~~~  248 (259)
                      ++|||..++
T Consensus       215 ~vdgG~~~s  223 (223)
T 3uce_A          215 DVDGGALLG  223 (223)
T ss_dssp             EESTTGGGC
T ss_pred             EecCCeecC
Confidence            999998763

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=2.3e-43  Score=289.45  Aligned_cols=232  Identities=24%  Similarity=0.330  Sum_probs=212.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-------EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-------IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTS   73 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   73 (259)
                      |++|||||++|||++++++|+++|+       +|++++|+.+.++...+++...+.++.++++|++|.++++++++++.+
T Consensus         3 k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (244)
T 2bd0_A            3 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   82 (244)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHHH
Confidence            6899999999999999999999999       999999999988888888776677899999999999999999999999


Q ss_pred             HcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhh
Q 024994           74 IFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAY  153 (259)
Q Consensus        74 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  153 (259)
                      .+ +++|+||||||.....++.+.+.++|++++++|+.+++.++++++|+|.+++.++||++||..+..+.++...|++|
T Consensus        83 ~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  161 (244)
T 2bd0_A           83 RY-GHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMS  161 (244)
T ss_dssp             HT-SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             hC-CCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCCCCchhHHH
Confidence            98 78999999999987778888999999999999999999999999999987778999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 024994          154 KGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASY  233 (259)
Q Consensus       154 K~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  233 (259)
                      |+++++|+++++.++.++||+++.++||+++|++........              ..++.+|+|+++.+++++++...+
T Consensus       162 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~--------------~~~~~~~~dva~~~~~l~~~~~~~  227 (244)
T 2bd0_A          162 KFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDEM--------------QALMMMPEDIAAPVVQAYLQPSRT  227 (244)
T ss_dssp             HHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCSTT--------------GGGSBCHHHHHHHHHHHHTSCTTE
T ss_pred             HHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccccc--------------cccCCCHHHHHHHHHHHHhCCccc
Confidence            999999999999999999999999999999999876532110              125779999999999999999999


Q ss_pred             ccccEEEeCCCcee
Q 024994          234 ITGQIICVDGGVTV  247 (259)
Q Consensus       234 ~~G~~l~~dgG~~~  247 (259)
                      ++|+++..++++.+
T Consensus       228 ~~g~~~~~~~~~~~  241 (244)
T 2bd0_A          228 VVEEIILRPTSGDI  241 (244)
T ss_dssp             EEEEEEEEETTCCC
T ss_pred             cchheEEecccccc
Confidence            99999999998765

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=8.5e-44  Score=293.17  Aligned_cols=226  Identities=34%  Similarity=0.450  Sum_probs=196.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+..++    +   + .+.++ +|+  .++++++++++     .++|
T Consensus        20 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~----~---~-~~~~~-~D~--~~~~~~~~~~~-----~~iD   83 (249)
T 1o5i_A           20 KGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR----S---G-HRYVV-CDL--RKDLDLLFEKV-----KEVD   83 (249)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH----T---C-SEEEE-CCT--TTCHHHHHHHS-----CCCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHh----h---C-CeEEE-eeH--HHHHHHHHHHh-----cCCC
Confidence            789999999999999999999999999999999743322    2   2 56677 999  44566666554     4799


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.++++++|.|.+++.++||++||..+..+.++...|++||+++++|
T Consensus        84 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  163 (249)
T 1o5i_A           84 ILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGF  163 (249)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCCCchHHHHHHHHHHH
Confidence            99999998877788889999999999999999999999999999887789999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHH-hhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLD-GIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      +++++.|++++||++|+|+||+++|++.....     +.... .+....|.+++.+|+|++++++|++++.+.+++|+++
T Consensus       164 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-----~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~s~~~~~~tG~~~  238 (249)
T 1o5i_A          164 LKTLSFEVAPYGITVNCVAPGWTETERVKELL-----SEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQTI  238 (249)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBCCTTHHHHS-----CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHhhhcCeEEEEEeeCCCccCcccccc-----hhhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCCCCCEE
Confidence            99999999999999999999999999864321     11233 4556678899999999999999999988899999999


Q ss_pred             EeCCCcee
Q 024994          240 CVDGGVTV  247 (259)
Q Consensus       240 ~~dgG~~~  247 (259)
                      .+|||...
T Consensus       239 ~vdgG~~~  246 (249)
T 1o5i_A          239 VVDGGLSK  246 (249)
T ss_dssp             EESTTCCC
T ss_pred             EECCCccc
Confidence            99999764

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=100.00  E-value=3.9e-43  Score=292.62  Aligned_cols=242  Identities=27%  Similarity=0.424  Sum_probs=213.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeC-ChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSR-NQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||+||||++++++|+++|++|++++| +.+.+++..+++...+.++.++++|++|.++++++++++.+.+ +++
T Consensus        22 k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~  100 (274)
T 1ja9_A           22 KVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF-GGL  100 (274)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH-SCE
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc-CCC
Confidence            68999999999999999999999999999999 7777877777777667789999999999999999999999999 689


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCcc-CCCCCChhhhhhHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV-RGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~-~~~~~~~~Y~~sK~a~~  158 (259)
                      |+||||||.....++.+.+.++|++++++|+.+++.++++++|.|. + +++||++||..+. .+.++...|++||++++
T Consensus       101 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~-~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~~  178 (274)
T 1ja9_A          101 DFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCR-R-GGRIILTSSIAAVMTGIPNHALYAGSKAAVE  178 (274)
T ss_dssp             EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEE-E-EEEEEEECCGGGTCCSCCSCHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHh-h-CCEEEEEcChHhccCCCCCCchHHHHHHHHH
Confidence            9999999988777778889999999999999999999999999987 3 3899999999888 77888999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCc----C----CCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE----E----GPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPA  230 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~----~----~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  230 (259)
                      .++++++.++.++||+++.++||+++|++.....    .    ..........+....|.+++.+++|+++++++++++.
T Consensus       179 ~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~~~~  258 (274)
T 1ja9_A          179 GFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSALCQEE  258 (274)
T ss_dssp             HHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCcc
Confidence            9999999999999999999999999998764210    0    1111234445556778889999999999999999987


Q ss_pred             CCCccccEEEeCCCc
Q 024994          231 ASYITGQIICVDGGV  245 (259)
Q Consensus       231 ~~~~~G~~l~~dgG~  245 (259)
                      ..+++|+++++|||.
T Consensus       259 ~~~~~G~~~~v~gG~  273 (274)
T 1ja9_A          259 SEWINGQVIKLTGGG  273 (274)
T ss_dssp             GTTCCSCEEEESTTC
T ss_pred             cccccCcEEEecCCc
Confidence            889999999999995

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=100.00  E-value=2.1e-43  Score=289.60  Aligned_cols=235  Identities=32%  Similarity=0.449  Sum_probs=206.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+||||++++++|+++|++|++++|+.+.+++..+++    ....++.+|++|.++++++++    .+ +++|
T Consensus         8 ~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~----~~-~~id   78 (244)
T 1cyd_A            8 LRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC----PGIEPVCVDLGDWDATEKALG----GI-GPVD   78 (244)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHHT----TC-CCCS
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----cCCCcEEecCCCHHHHHHHHH----Hc-CCCC
Confidence            68999999999999999999999999999999988776655432    245667999999999988876    34 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.++++++|.|.+++ .++||++||..+..+.++...|++||++++.
T Consensus        79 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  158 (244)
T 1cyd_A           79 LLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTM  158 (244)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred             EEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCCcchhHHHHHHHHH
Confidence            999999988777788889999999999999999999999999998766 6899999999999998999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      ++++++.++.+.||++++++||+++|++......   .......+....|.+++.+++|+++++++++++.+.+++|+.+
T Consensus       159 ~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~  235 (244)
T 1cyd_A          159 LTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSA---DPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTSGGGI  235 (244)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTC---CHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSSEE
T ss_pred             HHHHHHHHhhhcCeEEEEEecCcccCcccccccc---CHHHHHHHHhcCCccCCCCHHHHHHHHHHHhCchhhcccCCEE
Confidence            9999999999999999999999999987542211   1224455666778899999999999999999988889999999


Q ss_pred             EeCCCcee
Q 024994          240 CVDGGVTV  247 (259)
Q Consensus       240 ~~dgG~~~  247 (259)
                      .+|||..+
T Consensus       236 ~v~gG~~~  243 (244)
T 1cyd_A          236 LVDAGYLA  243 (244)
T ss_dssp             EESTTGGG
T ss_pred             EECCCccC
Confidence            99999764

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=2e-43  Score=287.57  Aligned_cols=224  Identities=16%  Similarity=0.173  Sum_probs=188.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++   +.++.++.+|++|.++++++++++.+    .+|
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~----~~d   74 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL---SNNVGYRARDLASHQEVEQLFEQLDS----IPS   74 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC---SSCCCEEECCTTCHHHHHHHHHSCSS----CCS
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH---hhccCeEeecCCCHHHHHHHHHHHhh----cCC
Confidence            68999999999999999999999999999999999887776554   45788999999999999998876532    459


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.++++++|.|.+++ ++||++||..+..+.++...|++||+++++|
T Consensus        75 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~  153 (230)
T 3guy_A           75 TVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQP-VNVVMIMSTAAQQPKAQESTYCAVKWAVKGL  153 (230)
T ss_dssp             EEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-CEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred             EEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEeecccCCCCCCCchhHHHHHHHHHH
Confidence            999999998888888999999999999999999999999999998764 4999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhC-CCCCCccccEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCL-PAASYITGQII  239 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~-~~~~~~~G~~l  239 (259)
                      +++++.|++++||+||+|+||+++|++......             ..+.+++.+|+|+++.++|+++ +...+++|+.+
T Consensus       154 ~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-------------~~~~~~~~~~~dvA~~i~~l~~~~~~~~itg~~~  220 (230)
T 3guy_A          154 IESVRLELKGKPMKIIAVYPGGMATEFWETSGK-------------SLDTSSFMSAEDAALMIHGALANIGNGYVSDITV  220 (230)
T ss_dssp             HHHHHHHTTTSSCEEEEEEECCC-----------------------------CCCHHHHHHHHHHHCCEETTEEEEEEEE
T ss_pred             HHHHHHHHHhcCeEEEEEECCcccChHHHhcCC-------------CCCcccCCCHHHHHHHHHHHHhCcCCCCccceee
Confidence            999999999999999999999999998754321             2356788999999999999987 67789999999


Q ss_pred             EeCCCc
Q 024994          240 CVDGGV  245 (259)
Q Consensus       240 ~~dgG~  245 (259)
                      ..+...
T Consensus       221 ~~~~~~  226 (230)
T 3guy_A          221 NREGHH  226 (230)
T ss_dssp             EC----
T ss_pred             cCCCCC
Confidence            988764

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=100.00  E-value=2.5e-43  Score=299.93  Aligned_cols=245  Identities=24%  Similarity=0.294  Sum_probs=196.8

Q ss_pred             CEEEEEcC--cchHHHHHHHHHHHCCCEEEEeeCChhH------HH-HHHHHHHhc--CCc---EEEEEec---------
Q 024994            1 MTALVTGG--TRGIGHATVEELARFGAIVHTCSRNQIE------LD-ARLHEWKNK--GFK---VTGSVCD---------   57 (259)
Q Consensus         1 k~~lItG~--s~giG~~~a~~l~~~G~~V~~~~r~~~~------~~-~~~~~~~~~--~~~---~~~~~~D---------   57 (259)
                      |++|||||  ++|||++++++|+++|++|++++|+...      .. ...+++...  +..   ..++.+|         
T Consensus        10 k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~   89 (315)
T 2o2s_A           10 QTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDKPEDV   89 (315)
T ss_dssp             CEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSSTTSS
T ss_pred             CEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccccccchh
Confidence            68999999  8999999999999999999999986420      00 011111111  111   2344443         


Q ss_pred             ---CC--------CHHHHHHHHHHHHHHcCCCccEEEEcCCCCC--CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHh
Q 024994           58 ---LS--------SREQREKLIETVTSIFQGKLNILINNAAIAF--VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLF  124 (259)
Q Consensus        58 ---~~--------~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~  124 (259)
                         ++        |.++++++++++.+.+ +++|+||||||+..  ..++.+.+.++|++++++|+.+++.++++++|+|
T Consensus        90 ~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~-g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m  168 (315)
T 2o2s_A           90 PQDIKDNKRYAGVDGYTIKEVAVKVKQDL-GNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIM  168 (315)
T ss_dssp             CHHHHTCGGGSSCCCCSHHHHHHHHHHHH-CSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTTE
T ss_pred             hhhhhcccccccCCHHHHHHHHHHHHHhc-CCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence               33        2568999999999999 79999999999763  4677889999999999999999999999999999


Q ss_pred             HhCCCCEEEEecCCCccCCCCCC-hhhhhhHHHHHHHHHHHHHHHcc-CCceEEEEeCCceeCCCCCCCcCCCCc---hH
Q 024994          125 KASGNGSIVFISSVGGVRGIPSV-SLYGAYKGAMNQLTKNLACEWAK-DNIRTNTVAPWVIKTSMIKPFEEGPEG---SE  199 (259)
Q Consensus       125 ~~~~~~~ii~isS~~~~~~~~~~-~~Y~~sK~a~~~~~~~~a~e~~~-~gi~v~~v~pg~v~t~~~~~~~~~~~~---~~  199 (259)
                      .+  .|+||++||..+..+.+++ ..|++||+++++|+++++.|+++ +|||||+|+||+++|++..........   ..
T Consensus       169 ~~--~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~  246 (315)
T 2o2s_A          169 NE--GGSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEKSFIDY  246 (315)
T ss_dssp             EE--EEEEEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCSSSSCHHHH
T ss_pred             hc--CCEEEEEecccccccCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhccccccchhHHH
Confidence            65  3899999999999888887 58999999999999999999985 899999999999999986543211110   11


Q ss_pred             HHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCceee
Q 024994          200 FLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVT  248 (259)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~  248 (259)
                      ..+.+....|.+|.++|+|++++++||+++.+.++||+.|.+|||..+.
T Consensus       247 ~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  295 (315)
T 2o2s_A          247 AIDYSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLHAM  295 (315)
T ss_dssp             HHHHHHHHSSSCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHhccCCCCCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCeeee
Confidence            2233445679999999999999999999998999999999999998763

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=100.00  E-value=9.4e-44  Score=303.06  Aligned_cols=245  Identities=24%  Similarity=0.258  Sum_probs=164.6

Q ss_pred             CEEEEEcC--cchHHHHHHHHHHHCCCEEEEeeCCh-----------hHHH-----------HHHHHHHhcCC---cEEE
Q 024994            1 MTALVTGG--TRGIGHATVEELARFGAIVHTCSRNQ-----------IELD-----------ARLHEWKNKGF---KVTG   53 (259)
Q Consensus         1 k~~lItG~--s~giG~~~a~~l~~~G~~V~~~~r~~-----------~~~~-----------~~~~~~~~~~~---~~~~   53 (259)
                      |++|||||  ++|||++++++|+++|++|++++|+.           ++++           +..+++...+.   ...+
T Consensus        10 k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (319)
T 2ptg_A           10 KTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVFDKI   89 (319)
T ss_dssp             CEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------CCSEE
T ss_pred             CEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccccccccc
Confidence            68999999  89999999999999999999998753           2221           12222222111   0234


Q ss_pred             EEec------------CCC--------HHHHHHHHHHHHHHcCCCccEEEEcCCCCC--CCCCCCCCHHHHHHHHHHhhH
Q 024994           54 SVCD------------LSS--------REQREKLIETVTSIFQGKLNILINNAAIAF--VKPTVDITAEDMSTVSSTNFE  111 (259)
Q Consensus        54 ~~~D------------~~~--------~~~~~~~~~~~~~~~~~~id~vi~~ag~~~--~~~~~~~~~~~~~~~~~~n~~  111 (259)
                      +.+|            ++|        .++++++++++.+.+ +++|+||||||+..  ..++.+.+.++|++++++|+.
T Consensus        90 ~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~-g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~  168 (319)
T 2ptg_A           90 YPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADV-GQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSY  168 (319)
T ss_dssp             EECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHH-SCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHTH
T ss_pred             ccccccccccccccchhcccccccccCHHHHHHHHHHHHHHc-CCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhhH
Confidence            4433            232        447899999999999 79999999999763  467788999999999999999


Q ss_pred             hHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCC-hhhhhhHHHHHHHHHHHHHHHcc-CCceEEEEeCCceeCCCCC
Q 024994          112 SVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSV-SLYGAYKGAMNQLTKNLACEWAK-DNIRTNTVAPWVIKTSMIK  189 (259)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~-~~Y~~sK~a~~~~~~~~a~e~~~-~gi~v~~v~pg~v~t~~~~  189 (259)
                      +++.++++++|+|.+  .++||++||..+..+.+++ ..|++||+++++|+++++.|+++ +|||||+|+||+++|++..
T Consensus       169 g~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~  246 (319)
T 2ptg_A          169 SFVSLLQHFLPLMKE--GGSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRAAS  246 (319)
T ss_dssp             HHHHHHHHHGGGEEE--EEEEEEEEECC------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC-----
T ss_pred             HHHHHHHHHHHHHhc--CceEEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccChhhh
Confidence            999999999999965  3899999999999888887 69999999999999999999985 8999999999999999876


Q ss_pred             CCcCCCC---chHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCceee
Q 024994          190 PFEEGPE---GSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVT  248 (259)
Q Consensus       190 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~  248 (259)
                      .......   .+...+.+....|.+|+.+|+|++++++||+++.+.++||+.|.+|||.++.
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~~  308 (319)
T 2ptg_A          247 AIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNGLHAM  308 (319)
T ss_dssp             --------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCTTC
T ss_pred             hcccccchhhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCceee
Confidence            4321110   0111222334578899999999999999999998999999999999998653

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=9.4e-43  Score=318.75  Aligned_cols=228  Identities=27%  Similarity=0.392  Sum_probs=195.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||+++|++|+++|++|++++|+.  .++..+++...+.++..+.+|++  ++.+++++++.+++ +++|
T Consensus       323 kvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~~~~~i~~~g~~~~~~~~Dv~--~~~~~~~~~~~~~~-G~iD  397 (604)
T 2et6_A          323 KVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKAAGGEAWPDQHDVA--KDSEAIIKNVIDKY-GTID  397 (604)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHHTTCEEEEECCCHH--HHHHHHHHHHHHHH-SCCC
T ss_pred             CeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HHHHHHHHHhcCCeEEEEEcChH--HHHHHHHHHHHHhc-CCCC
Confidence            7899999999999999999999999999998742  34455566555667777778884  45677889999999 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||+....++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||.++..+.++...|++||+|+.+|
T Consensus       398 iLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~asKaal~~l  477 (604)
T 2et6_A          398 ILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGL  477 (604)
T ss_dssp             EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTBHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCChhHHHHHHHHHHH
Confidence            99999999877888999999999999999999999999999999988789999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC  240 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~  240 (259)
                      +++++.|++++|||||+|+||. .|++.......              ......+|+|++++++||+++.+. +||+.|.
T Consensus       478 t~~la~El~~~gIrVn~v~PG~-~T~m~~~~~~~--------------~~~~~~~pe~vA~~v~~L~s~~~~-itG~~~~  541 (604)
T 2et6_A          478 SKTMAIEGAKNNIKVNIVAPHA-ETAMTLSIMRE--------------QDKNLYHADQVAPLLVYLGTDDVP-VTGETFE  541 (604)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECC-CCCC-----------------------CCSSCGGGTHHHHHHTTSTTCC-CCSCEEE
T ss_pred             HHHHHHHhCccCeEEEEEcCCC-CCccccccCch--------------hhccCCCHHHHHHHHHHHhCCccC-CCCcEEE
Confidence            9999999999999999999995 99986532110              012345899999999999999888 9999999


Q ss_pred             eCCCceeee
Q 024994          241 VDGGVTVTV  249 (259)
Q Consensus       241 ~dgG~~~~~  249 (259)
                      +|||.....
T Consensus       542 vdGG~~~~~  550 (604)
T 2et6_A          542 IGGGWIGNT  550 (604)
T ss_dssp             EETTEEEEE
T ss_pred             ECCCeeEee
Confidence            999987643

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=3e-43  Score=322.03  Aligned_cols=231  Identities=27%  Similarity=0.377  Sum_probs=200.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCCh---------hHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ---------IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETV   71 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~---------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   71 (259)
                      |++|||||++|||+++|++|+++|++|++++|+.         +.+++..+++...+.+.   .+|++|.++++++++++
T Consensus         9 kvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~---~~d~~d~~~~~~~v~~~   85 (604)
T 2et6_A            9 KVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVA---VADYNNVLDGDKIVETA   85 (604)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEE---EEECCCTTCHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeE---EEEcCCHHHHHHHHHHH
Confidence            7899999999999999999999999999998765         56677777776655443   36888888889999999


Q ss_pred             HHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhh
Q 024994           72 TSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYG  151 (259)
Q Consensus        72 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~  151 (259)
                      .+.+ +++|+||||||+....++.+.+.++|++++++|+.+++.++|+++|+|++++.|+||++||..+..+.++...|+
T Consensus        86 ~~~~-G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~  164 (604)
T 2et6_A           86 VKNF-GTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYA  164 (604)
T ss_dssp             HHHH-SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHH
T ss_pred             HHHc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCchHHH
Confidence            9999 799999999999877788999999999999999999999999999999887789999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCC
Q 024994          152 AYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAA  231 (259)
Q Consensus       152 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  231 (259)
                      +||+|+.+|+++++.|++++|||||+|+|| +.|++......    +...          ...+|+|++.+++||+++. 
T Consensus       165 asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m~~~~~~----~~~~----------~~~~pe~vA~~v~~L~s~~-  228 (604)
T 2et6_A          165 SAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRMTESIMP----PPML----------EKLGPEKVAPLVLYLSSAE-  228 (604)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHHHHTTSC----HHHH----------TTCSHHHHHHHHHHHTSSS-
T ss_pred             HHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCccccccCC----hhhh----------ccCCHHHHHHHHHHHhCCc-
Confidence            999999999999999999999999999998 68876533211    1010          1358999999999999988 


Q ss_pred             CCccccEEEeCCCceeeecc
Q 024994          232 SYITGQIICVDGGVTVTVNV  251 (259)
Q Consensus       232 ~~~~G~~l~~dgG~~~~~~~  251 (259)
                      .++||+.|.+|||......|
T Consensus       229 ~~itG~~~~vdgG~~~~~~~  248 (604)
T 2et6_A          229 NELTGQFFEVAAGFYAQIRW  248 (604)
T ss_dssp             CCCCSCEEEEETTEEEEEEE
T ss_pred             ccCCCCEEEECCCeEEEEEE
Confidence            99999999999998766554

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=3.8e-42  Score=288.08  Aligned_cols=237  Identities=23%  Similarity=0.303  Sum_probs=202.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++   +.++.++++|++|.++++++++++.+.+ +++|
T Consensus         6 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~-g~id   81 (281)
T 3m1a_A            6 KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY---PDRAEAISLDVTDGERIDVVAADVLARY-GRVD   81 (281)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC---TTTEEEEECCTTCHHHHHHHHHHHHHHH-SCCS
T ss_pred             cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---cCCceEEEeeCCCHHHHHHHHHHHHHhC-CCCC
Confidence            68999999999999999999999999999999998887765543   4579999999999999999999999999 7899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.++++++|.|++++.++||++||..+..+.++...|++||+++++|
T Consensus        82 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~  161 (281)
T 3m1a_A           82 VLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQL  161 (281)
T ss_dssp             EEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHH
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCCchHHHHHHHHHHHH
Confidence            99999999877888899999999999999999999999999999988789999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcC-----CCCch---HHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCC
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE-----GPEGS---EFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAAS  232 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~-----~~~~~---~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  232 (259)
                      +++++.|++++||++|+|+||+++|++......     .....   ..........+.+++.+|+|++++++++++... 
T Consensus       162 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~~~-  240 (281)
T 3m1a_A          162 SEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPAKAAAAIRLALDTEK-  240 (281)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----CBCHHHHHHHHHHHHHSSS-
T ss_pred             HHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccCCCCCCHHHHHHHHHHHHhCCC-
Confidence            999999999999999999999999999754321     11110   112234455678889999999999999997653 


Q ss_pred             CccccEEEeCCC
Q 024994          233 YITGQIICVDGG  244 (259)
Q Consensus       233 ~~~G~~l~~dgG  244 (259)
                        .+..+++.++
T Consensus       241 --~~~~~~l~s~  250 (281)
T 3m1a_A          241 --TPLRLALGGD  250 (281)
T ss_dssp             --CCSEEEESHH
T ss_pred             --CCeEEecCch
Confidence              4667777655

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=100.00  E-value=1.4e-42  Score=293.06  Aligned_cols=241  Identities=24%  Similarity=0.263  Sum_probs=196.6

Q ss_pred             CEEEEEcCc--chHHHHHHHHHHHCCCEEEEeeCChhHH-----------HHHHHHHHhcC--CcEEEEEec--------
Q 024994            1 MTALVTGGT--RGIGHATVEELARFGAIVHTCSRNQIEL-----------DARLHEWKNKG--FKVTGSVCD--------   57 (259)
Q Consensus         1 k~~lItG~s--~giG~~~a~~l~~~G~~V~~~~r~~~~~-----------~~~~~~~~~~~--~~~~~~~~D--------   57 (259)
                      |++|||||+  +|||++++++|+++|++|++++|+....           ++. +++....  .....+.+|        
T Consensus         9 k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d   87 (297)
T 1d7o_A            9 KRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS-RVLPDGSLMEIKKVYPLDAVFDNPED   87 (297)
T ss_dssp             CEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGG-GBCTTSSBCCEEEEEEECTTCCSGGG
T ss_pred             CEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhh-hhhccccccccccccccceeccchhh
Confidence            689999999  9999999999999999999998764211           111 1111100  112344443        


Q ss_pred             CCC------------HHHHHHHHHHHHHHcCCCccEEEEcCCCCC--CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHH
Q 024994           58 LSS------------REQREKLIETVTSIFQGKLNILINNAAIAF--VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPL  123 (259)
Q Consensus        58 ~~~------------~~~~~~~~~~~~~~~~~~id~vi~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  123 (259)
                      +++            .++++++++++.+.+ +++|+||||||+..  ..++.+.+.++|++++++|+.+++.++++++|+
T Consensus        88 v~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  166 (297)
T 1d7o_A           88 VPEDVKANKRYAGSSNWTVQEAAECVRQDF-GSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPI  166 (297)
T ss_dssp             SCHHHHTSHHHHHCCCCSHHHHHHHHHHHH-SCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             hhhhhhccccccccCHHHHHHHHHHHHHHc-CCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence            332            568899999999999 79999999999753  467788899999999999999999999999999


Q ss_pred             hHhCCCCEEEEecCCCccCCCCCC-hhhhhhHHHHHHHHHHHHHHHcc-CCceEEEEeCCceeCCCCCCCcCCCCchHHH
Q 024994          124 FKASGNGSIVFISSVGGVRGIPSV-SLYGAYKGAMNQLTKNLACEWAK-DNIRTNTVAPWVIKTSMIKPFEEGPEGSEFL  201 (259)
Q Consensus       124 ~~~~~~~~ii~isS~~~~~~~~~~-~~Y~~sK~a~~~~~~~~a~e~~~-~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~  201 (259)
                      |.+  .++||++||..+..+.+++ ..|++||+++++|+++++.|+++ +||+||+|+||+++|++.....   ..+...
T Consensus       167 m~~--~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~---~~~~~~  241 (297)
T 1d7o_A          167 MNP--GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIG---FIDTMI  241 (297)
T ss_dssp             EEE--EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCS---HHHHHH
T ss_pred             hcc--CceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhcc---ccHHHH
Confidence            965  3899999999999988887 69999999999999999999985 8999999999999999875431   112234


Q ss_pred             HhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCceee
Q 024994          202 DGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVT  248 (259)
Q Consensus       202 ~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~  248 (259)
                      ..+....|.+++.+|+|++++++||+++.+.+++|+.|.+|||.++.
T Consensus       242 ~~~~~~~p~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~~~~  288 (297)
T 1d7o_A          242 EYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSM  288 (297)
T ss_dssp             HHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHhhccCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCceee
Confidence            44556678999999999999999999988899999999999998753

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=1.8e-42  Score=292.84  Aligned_cols=229  Identities=24%  Similarity=0.367  Sum_probs=196.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++...+.++.++++|++|.++++++++++.+.+ +++|
T Consensus        32 k~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~id  110 (301)
T 3tjr_A           32 RAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLL-GGVD  110 (301)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-SSCS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhC-CCCC
Confidence            689999999999999999999999999999999999999988888778889999999999999999999999999 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      +||||||+...+++.+.+.++|++++++|+.+++.++++++|+|.+++ .++||++||..+..+.++...|++||+++++
T Consensus       111 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~  190 (301)
T 3tjr_A          111 VVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVG  190 (301)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCchHHHHHHHHHHH
Confidence            999999998888888999999999999999999999999999998766 6899999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCc-----hHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEG-----SEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPA  230 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  230 (259)
                      |+++++.|+.+.||+|++|+||+++|++..........     ......+..........+|+|+|+.++..+...
T Consensus       191 ~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~~~l~~~  266 (301)
T 3tjr_A          191 LAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTADAILAN  266 (301)
T ss_dssp             HHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC----------------------CCCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhccccccccCCCCHHHHHHHHHHHHhcC
Confidence            99999999999999999999999999986532110000     000111111223345679999999999888644

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=100.00  E-value=1.7e-41  Score=276.65  Aligned_cols=225  Identities=24%  Similarity=0.293  Sum_probs=190.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+||||++++++|+++|++|++++|+.+++++..+++.    ++.++.+|++|.++++++++++.+.+ +++|
T Consensus         6 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id   80 (234)
T 2ehd_A            6 GAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE----GALPLPGDVREEGDWARAVAAMEEAF-GELS   80 (234)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh----hceEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence            689999999999999999999999999999999888776655442    67889999999999999999999999 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.+++.++|.|.+++.++||++||..+..+.++...|+++|++++.+
T Consensus        81 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (234)
T 2ehd_A           81 ALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGL  160 (234)
T ss_dssp             EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHH
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCCCchhhHHHHHHHHH
Confidence            99999998877788889999999999999999999999999999988789999999999999989999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC  240 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~  240 (259)
                      +++++.++.++||+++.|+||+++|++.....   .      .+       ...+|+|+++++++++++.+.+++|+++.
T Consensus       161 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~------~~-------~~~~~~dvA~~~~~l~~~~~~~~~g~~~~  224 (234)
T 2ehd_A          161 AGAAMLDLREANVRVVNVLPGSVDTGFAGNTP---G------QA-------WKLKPEDVAQAVLFALEMPGHAMVSEIEL  224 (234)
T ss_dssp             HHHHHHHHGGGTEEEEEEECC--------------------------------CCHHHHHHHHHHHHHSCCSSCCCEEEC
T ss_pred             HHHHHHHHhhcCcEEEEEEeCCCcCCcccccc---c------cc-------CCCCHHHHHHHHHHHhCCCcccccceEEE
Confidence            99999999999999999999999999865321   0      01       03589999999999999888999999776


Q ss_pred             eCCCce
Q 024994          241 VDGGVT  246 (259)
Q Consensus       241 ~dgG~~  246 (259)
                      .++...
T Consensus       225 ~~~~~~  230 (234)
T 2ehd_A          225 RPTRPT  230 (234)
T ss_dssp             CC----
T ss_pred             eecCCC
Confidence            666544

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=100.00  E-value=1.1e-42  Score=285.17  Aligned_cols=221  Identities=17%  Similarity=0.097  Sum_probs=195.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC-CCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ-GKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~~i   79 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+..+          ....++++|++|.++++++++++.+.++ +++
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~i   77 (241)
T 1dhr_A            8 RRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA----------SASVIVKMTDSFTEQADQVTAEVGKLLGDQKV   77 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS----------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc----------CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCC
Confidence            68999999999999999999999999999999876532          1457788999999999999999999884 489


Q ss_pred             cEEEEcCCCCCCCCC-CCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           80 NILINNAAIAFVKPT-VDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        80 d~vi~~ag~~~~~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      |+||||||.....++ .+.+.++|++++++|+.+++.++++++|.|.+  .++||++||..+..+.++...|++||++++
T Consensus        78 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asK~a~~  155 (241)
T 1dhr_A           78 DAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAALDGTPGMIGYGMAKGAVH  155 (241)
T ss_dssp             EEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHHHH
T ss_pred             CEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--CCEEEEECCHHHccCCCCchHHHHHHHHHH
Confidence            999999998877777 77889999999999999999999999999965  489999999999999999999999999999


Q ss_pred             HHHHHHHHHHc--cCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccc
Q 024994          159 QLTKNLACEWA--KDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG  236 (259)
Q Consensus       159 ~~~~~~a~e~~--~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G  236 (259)
                      +|+++++.|++  ++||+||+|+||+++|++........             ...+..+++|+++.+++++++...+++|
T Consensus       156 ~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~-------------~~~~~~~~~~vA~~v~~l~~~~~~~~~G  222 (241)
T 1dhr_A          156 QLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPEA-------------DFSSWTPLEFLVETFHDWITGNKRPNSG  222 (241)
T ss_dssp             HHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTTS-------------CGGGSEEHHHHHHHHHHHHTTTTCCCTT
T ss_pred             HHHHHHHHHhccCCCCeEEEEEecCcccCccccccCcch-------------hhccCCCHHHHHHHHHHHhcCCCcCccc
Confidence            99999999998  89999999999999999754321111             1123457899999999999999999999


Q ss_pred             cEEEeCCCce
Q 024994          237 QIICVDGGVT  246 (259)
Q Consensus       237 ~~l~~dgG~~  246 (259)
                      +.+.+|||..
T Consensus       223 ~~~~v~g~~~  232 (241)
T 1dhr_A          223 SLIQVVTTDG  232 (241)
T ss_dssp             CEEEEEEETT
T ss_pred             eEEEEeCCCC
Confidence            9999999865

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=3.2e-42  Score=286.53  Aligned_cols=240  Identities=23%  Similarity=0.283  Sum_probs=198.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++...  +.++.++++|++|.++++++++++.+.+ ++
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~   86 (267)
T 2gdz_A            8 KVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF-GR   86 (267)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH-SC
T ss_pred             CEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc-CC
Confidence            68999999999999999999999999999999998887777666542  3468899999999999999999999999 79


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC---CCEEEEecCCCccCCCCCChhhhhhHH
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG---NGSIVFISSVGGVRGIPSVSLYGAYKG  155 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~~~ii~isS~~~~~~~~~~~~Y~~sK~  155 (259)
                      +|+||||||...        .++|++++++|+.+++.+++.++|.|.+++   .++||++||..+..+.++...|++||+
T Consensus        87 id~lv~~Ag~~~--------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  158 (267)
T 2gdz_A           87 LDILVNNAGVNN--------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKH  158 (267)
T ss_dssp             CCEEEECCCCCC--------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCEEEECCCCCC--------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCCchHHHHHH
Confidence            999999999742        356899999999999999999999997653   589999999999999999999999999


Q ss_pred             HHHHHHHHH--HHHHccCCceEEEEeCCceeCCCCCCCcCCCCch---HHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 024994          156 AMNQLTKNL--ACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGS---EFLDGIARQTPIGRAGEPDEVSSLVAFLCLPA  230 (259)
Q Consensus       156 a~~~~~~~~--a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  230 (259)
                      ++++|++++  +.|+.+.||+||+|+||+++|++...........   ...+......+..++.+|+|++++++|++++.
T Consensus       159 a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~  238 (267)
T 2gdz_A          159 GIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIEDD  238 (267)
T ss_dssp             HHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHHHCT
T ss_pred             HHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHHHhccccCCCHHHHHHHHHHHhcCc
Confidence            999999995  6889999999999999999999864321100000   00111111122234679999999999999865


Q ss_pred             CCCccccEEEeCCCceeeecc
Q 024994          231 ASYITGQIICVDGGVTVTVNV  251 (259)
Q Consensus       231 ~~~~~G~~l~~dgG~~~~~~~  251 (259)
                        +++|+++.+|||...++.-
T Consensus       239 --~~~G~~~~v~gg~~~~~~~  257 (267)
T 2gdz_A          239 --ALNGAIMKITTSKGIHFQD  257 (267)
T ss_dssp             --TCSSCEEEEETTTEEEECC
T ss_pred             --CCCCcEEEecCCCcccccC
Confidence              5999999999998776543

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=100.00  E-value=2.9e-42  Score=284.32  Aligned_cols=220  Identities=16%  Similarity=0.151  Sum_probs=196.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.++.+            ...+.+|++|.++++++++++.+.+ +++|
T Consensus        23 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~------------~~~~~~d~~d~~~v~~~~~~~~~~~-g~iD   89 (251)
T 3orf_A           23 KNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA------------DHSFTIKDSGEEEIKSVIEKINSKS-IKVD   89 (251)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS------------SEEEECSCSSHHHHHHHHHHHHTTT-CCEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc------------ccceEEEeCCHHHHHHHHHHHHHHc-CCCC
Confidence            78999999999999999999999999999999886542            1356799999999999999999988 7999


Q ss_pred             EEEEcCCCCCCCC-CCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAFVKP-TVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~~~~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      +||||||+....+ ..+.+.++|++++++|+.+++.++++++|.|++  .++||++||..+..+.++...|++||+++++
T Consensus        90 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~  167 (251)
T 3orf_A           90 TFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ--GGLFVLTGASAALNRTSGMIAYGATKAATHH  167 (251)
T ss_dssp             EEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHHHHH
T ss_pred             EEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc--CCEEEEEechhhccCCCCCchhHHHHHHHHH
Confidence            9999999876654 677889999999999999999999999999965  4899999999999999999999999999999


Q ss_pred             HHHHHHHHHc--cCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCC-CCCCccc
Q 024994          160 LTKNLACEWA--KDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLP-AASYITG  236 (259)
Q Consensus       160 ~~~~~a~e~~--~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~-~~~~~~G  236 (259)
                      |+++++.|++  ++||+||+|+||+++|++....             ....+.+++.+|+|+++++++++++ .+.+++|
T Consensus       168 ~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~-------------~~~~~~~~~~~~~dva~~i~~l~~~~~~~~~tG  234 (251)
T 3orf_A          168 IIKDLASENGGLPAGSTSLGILPVTLDTPTNRKY-------------MSDANFDDWTPLSEVAEKLFEWSTNSDSRPTNG  234 (251)
T ss_dssp             HHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHH-------------CTTSCGGGSBCHHHHHHHHHHHHHCGGGCCCTT
T ss_pred             HHHHHHHHhcccCCCcEEEEEecCcCcCcchhhh-------------cccccccccCCHHHHHHHHHHHhcCccccCCcc
Confidence            9999999986  8899999999999999875332             2233556788999999999999998 8899999


Q ss_pred             cEEEeCCCceee
Q 024994          237 QIICVDGGVTVT  248 (259)
Q Consensus       237 ~~l~~dgG~~~~  248 (259)
                      +.+.+++|...+
T Consensus       235 ~~i~v~~g~~~~  246 (251)
T 3orf_A          235 SLVKFETKSKVT  246 (251)
T ss_dssp             CEEEEEEETTEE
T ss_pred             eEEEEecCCccc
Confidence            999999887665

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=4.9e-41  Score=281.09  Aligned_cols=238  Identities=24%  Similarity=0.308  Sum_probs=202.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG--FKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++...+  .++.++.+|++|.++++++++++.+.+ ++
T Consensus        33 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g~  111 (279)
T 1xg5_A           33 RLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH-SG  111 (279)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH-CC
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC-CC
Confidence            689999999999999999999999999999999998888877776543  468899999999999999999999998 68


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCC--CEEEEecCCCcc--CCCCCChhhhhhH
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGN--GSIVFISSVGGV--RGIPSVSLYGAYK  154 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~ii~isS~~~~--~~~~~~~~Y~~sK  154 (259)
                      +|+||||||.....++.+.+.++|++++++|+.+++.+++.++|.|.+.+.  ++||++||..+.  .+.++...|+++|
T Consensus       112 iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK  191 (279)
T 1xg5_A          112 VDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATK  191 (279)
T ss_dssp             CSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCCCCCchhHHHH
Confidence            999999999887778888899999999999999999999999999988753  899999999887  5677788999999


Q ss_pred             HHHHHHHHHHHHHHc--cCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCC
Q 024994          155 GAMNQLTKNLACEWA--KDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAAS  232 (259)
Q Consensus       155 ~a~~~~~~~~a~e~~--~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  232 (259)
                      +++++|+++++.|+.  +.+|++++|+||+++|++....... . .   .......+..++.+|+|+++++++++++...
T Consensus       192 ~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~-~-~---~~~~~~~~~~~~~~~~dvA~~i~~l~~~~~~  266 (279)
T 1xg5_A          192 YAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDK-D-P---EKAAATYEQMKCLKPEDVAEAVIYVLSTPAH  266 (279)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTT-C-H---HHHHHHHC---CBCHHHHHHHHHHHHHSCTT
T ss_pred             HHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhccc-C-h---hHHhhhcccccCCCHHHHHHHHHHHhcCCcc
Confidence            999999999999998  7899999999999999984322111 1 1   1122223455788999999999999998888


Q ss_pred             CccccEEEeCCC
Q 024994          233 YITGQIICVDGG  244 (259)
Q Consensus       233 ~~~G~~l~~dgG  244 (259)
                      +.+|++...++|
T Consensus       267 ~~~g~i~i~~~~  278 (279)
T 1xg5_A          267 IQIGDIQMRPTG  278 (279)
T ss_dssp             EEEEEEEEEETT
T ss_pred             eEeeeEEEccCC
Confidence            888875554444

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=8.3e-42  Score=279.53  Aligned_cols=227  Identities=25%  Similarity=0.316  Sum_probs=198.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+ .           .++.++++|++|.++++++++++ +.+ +++|
T Consensus         3 k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~-----------~~~~~~~~D~~~~~~~~~~~~~~-~~~-~~~d   68 (242)
T 1uay_A            3 RSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G-----------EDLIYVEGDVTREEDVRRAVARA-QEE-APLF   68 (242)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S-----------SSSEEEECCTTCHHHHHHHHHHH-HHH-SCEE
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c-----------cceEEEeCCCCCHHHHHHHHHHH-Hhh-CCce
Confidence            68999999999999999999999999999999875 1           14578899999999999999999 777 6899


Q ss_pred             EEEEcCCCCCCCCCCCC----CHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC---C---CEEEEecCCCccCCCCCChhh
Q 024994           81 ILINNAAIAFVKPTVDI----TAEDMSTVSSTNFESVFHLSQLAHPLFKASG---N---GSIVFISSVGGVRGIPSVSLY  150 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~----~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~---~~ii~isS~~~~~~~~~~~~Y  150 (259)
                      ++|||||.....++.+.    +.++|++++++|+.+++.+++++.|.|.+++   .   ++||++||..+..+.++...|
T Consensus        69 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y  148 (242)
T 1uay_A           69 AVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAY  148 (242)
T ss_dssp             EEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHH
T ss_pred             EEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCchh
Confidence            99999998766655554    3559999999999999999999999998754   3   399999999999888999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCC-CCCCCHHHHHHHHHHHhCC
Q 024994          151 GAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPI-GRAGEPDEVSSLVAFLCLP  229 (259)
Q Consensus       151 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~~~  229 (259)
                      ++||++++.++++++.|++++||+++.|+||+++|++.....     ......+....|. +++.+|+|+++++++++++
T Consensus       149 ~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  223 (242)
T 1uay_A          149 AASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLP-----EKAKASLAAQVPFPPRLGRPEEYAALVLHILEN  223 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSC-----HHHHHHHHTTCCSSCSCCCHHHHHHHHHHHHHC
T ss_pred             hHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccc-----hhHHHHHHhhCCCcccCCCHHHHHHHHHHHhcC
Confidence            999999999999999999999999999999999999865431     2234555566777 8899999999999999986


Q ss_pred             CCCCccccEEEeCCCceee
Q 024994          230 AASYITGQIICVDGGVTVT  248 (259)
Q Consensus       230 ~~~~~~G~~l~~dgG~~~~  248 (259)
                        .+++|+.+.+|||++++
T Consensus       224 --~~~~G~~~~v~gG~~~~  240 (242)
T 1uay_A          224 --PMLNGEVVRLDGALRMA  240 (242)
T ss_dssp             --TTCCSCEEEESTTCCCC
T ss_pred             --CCCCCcEEEEcCCeecC
Confidence              78999999999998764

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=5.8e-41  Score=285.72  Aligned_cols=229  Identities=24%  Similarity=0.301  Sum_probs=189.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCC--cEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF--KVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||+||||++++++|+++|++|++++|+.+++++..+++...+.  ++.++++|++|.++++++++++.+.+ ++
T Consensus         9 k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g~   87 (319)
T 3ioy_A            9 RTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF-GP   87 (319)
T ss_dssp             CEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT-CC
T ss_pred             CEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC-CC
Confidence            6899999999999999999999999999999999999988888876554  79999999999999999999999999 79


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC------CCCEEEEecCCCccCCCCCChhhhh
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS------GNGSIVFISSVGGVRGIPSVSLYGA  152 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~~~~ii~isS~~~~~~~~~~~~Y~~  152 (259)
                      +|+||||||+...+++.+.+.++|++++++|+.+++.++++++|.|.++      +.|+||++||..+..+.++...|++
T Consensus        88 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~~~~Y~a  167 (319)
T 3ioy_A           88 VSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNT  167 (319)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSSSHHHHH
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCCCHHHHH
Confidence            9999999999888889999999999999999999999999999999764      5799999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchH-----HHH-hhhhcCCC-CCCCCHHHHHHHHHH
Q 024994          153 YKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSE-----FLD-GIARQTPI-GRAGEPDEVSSLVAF  225 (259)
Q Consensus       153 sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~-----~~~-~~~~~~~~-~~~~~~~~va~~~~~  225 (259)
                      ||+++++|+++++.|+.+.||+|++|+||+|+|++............     ... ......+. ....+|+++++.++.
T Consensus       168 SKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~vA~~~~~  247 (319)
T 3ioy_A          168 TKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPDVIGARVIE  247 (319)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------CCGGGSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHhhhcCCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999864322111000     000 00001111 122689999999998


Q ss_pred             HhCCC
Q 024994          226 LCLPA  230 (259)
Q Consensus       226 l~~~~  230 (259)
                      .+...
T Consensus       248 al~~~  252 (319)
T 3ioy_A          248 AMKAN  252 (319)
T ss_dssp             HHHTT
T ss_pred             HHHcC
Confidence            88654

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=100.00  E-value=2.6e-42  Score=290.57  Aligned_cols=225  Identities=21%  Similarity=0.193  Sum_probs=183.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++   +.++.++++|++|.++++++++++     +++|
T Consensus        17 k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~v~~~~~~~-----~~iD   88 (291)
T 3rd5_A           17 RTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM---AGQVEVRELDLQDLSSVRRFADGV-----SGAD   88 (291)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS---SSEEEEEECCTTCHHHHHHHHHTC-----CCEE
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---cCCeeEEEcCCCCHHHHHHHHHhc-----CCCC
Confidence            78999999999999999999999999999999998887766544   568999999999999999988865     5899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCC-------------CCCC
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-------------IPSV  147 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~-------------~~~~  147 (259)
                      +||||||+..  +..+.+.++|++++++|+.+++.++++++|.|.+    +||++||..+..+             .++.
T Consensus        89 ~lv~nAg~~~--~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~----riv~isS~~~~~~~~~~~~~~~~~~~~~~~  162 (291)
T 3rd5_A           89 VLINNAGIMA--VPYALTVDGFESQIGTNHLGHFALTNLLLPRLTD----RVVTVSSMAHWPGRINLEDLNWRSRRYSPW  162 (291)
T ss_dssp             EEEECCCCCS--CCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE----EEEEECCGGGTTCCCCSSCTTCSSSCCCHH
T ss_pred             EEEECCcCCC--CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh----heeEeechhhccCCCCcccccccccCCCCc
Confidence            9999999864  3355678899999999999999999999999854    8999999887755             3456


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHccCC--ceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCC-HHHHHHHHH
Q 024994          148 SLYGAYKGAMNQLTKNLACEWAKDN--IRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGE-PDEVSSLVA  224 (259)
Q Consensus       148 ~~Y~~sK~a~~~~~~~~a~e~~~~g--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~va~~~~  224 (259)
                      ..|++||+++++|+++++.++.++|  |++|+|+||+++|++.......      ........+.++... |+|+++.++
T Consensus       163 ~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~A~~~~  236 (291)
T 3rd5_A          163 LAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRK------LGDALMSAATRVVATDADFGARQTL  236 (291)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC--------------------------CHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchH------HHHHHHHHHHHHHhCCHHHHHHHHH
Confidence            7899999999999999999999888  9999999999999998764321      112223355666665 999999999


Q ss_pred             HHhCCCCCCccccEEEeCCCcee
Q 024994          225 FLCLPAASYITGQIICVDGGVTV  247 (259)
Q Consensus       225 ~l~~~~~~~~~G~~l~~dgG~~~  247 (259)
                      |++++  ++++|+++.+|||+.-
T Consensus       237 ~l~~~--~~~~G~~~~vdgG~~~  257 (291)
T 3rd5_A          237 YAASQ--DLPGDSFVGPRFGYLG  257 (291)
T ss_dssp             HHHHS--CCCTTCEEEETTSSSS
T ss_pred             HHHcC--CCCCCceeCCcccccC
Confidence            99987  4899999999999764

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=100.00  E-value=1.3e-42  Score=298.16  Aligned_cols=238  Identities=15%  Similarity=0.058  Sum_probs=199.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHH-CCCEEEEeeCChhHHH------------HHHHHHHhcCCcEEEEEecCCCHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELAR-FGAIVHTCSRNQIELD------------ARLHEWKNKGFKVTGSVCDLSSREQREKL   67 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~-~G~~V~~~~r~~~~~~------------~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   67 (259)
                      |++|||||++|||+++++.|++ +|++|++++|+.+..+            ...+++...+.++..+.+|++|.++++++
T Consensus        48 KvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v~~~  127 (405)
T 3zu3_A           48 KRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIKQLT  127 (405)
T ss_dssp             SEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHH
T ss_pred             CEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHHHHH
Confidence            7899999999999999999999 9999999998765421            23334555577889999999999999999


Q ss_pred             HHHHHHHcCCCccEEEEcCCCC-------------CCCCC---------------------CCCCHHHHHHHHHHhhHhH
Q 024994           68 IETVTSIFQGKLNILINNAAIA-------------FVKPT---------------------VDITAEDMSTVSSTNFESV  113 (259)
Q Consensus        68 ~~~~~~~~~~~id~vi~~ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~n~~~~  113 (259)
                      ++++.+.+ |++|+||||||..             ...++                     .+.+.++|++++++|..+.
T Consensus       128 v~~i~~~~-G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~~~  206 (405)
T 3zu3_A          128 IDAIKQDL-GQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGGED  206 (405)
T ss_dssp             HHHHHHHT-SCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSHH
T ss_pred             HHHHHHHc-CCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhchhH
Confidence            99999999 7999999999974             23344                     6789999999999999999


Q ss_pred             H-HHHHHHHHH-hHhCCCCEEEEecCCCccCCCCCC--hhhhhhHHHHHHHHHHHHHHHccC-CceEEEEeCCceeCCCC
Q 024994          114 F-HLSQLAHPL-FKASGNGSIVFISSVGGVRGIPSV--SLYGAYKGAMNQLTKNLACEWAKD-NIRTNTVAPWVIKTSMI  188 (259)
Q Consensus       114 ~-~~~~~~~~~-~~~~~~~~ii~isS~~~~~~~~~~--~~Y~~sK~a~~~~~~~~a~e~~~~-gi~v~~v~pg~v~t~~~  188 (259)
                      + .+++++.+. |.+ ++|+||++||.++..+.|.+  ..|++||+++++|+|+++.|++++ |||||+|+||.+.|++.
T Consensus       207 ~~~~~~~~~~~~m~~-~gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T~~s  285 (405)
T 3zu3_A          207 WQMWIDALLDAGVLA-EGAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVSQAS  285 (405)
T ss_dssp             HHHHHHHHHHHTCEE-EEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCCHHH
T ss_pred             HHHHHHHHHHHhhhh-CCcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcCchh
Confidence            8 788877654 443 46999999999999988877  999999999999999999999999 99999999999999987


Q ss_pred             CCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCceee
Q 024994          189 KPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVT  248 (259)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~  248 (259)
                      ...+..   +....  ....+++|.+.|||+++.+.||+++   ++.|+.+.+|++..+.
T Consensus       286 ~~ip~~---p~y~~--~l~~~mkr~G~~Ed~a~~i~~L~sd---~l~~~~~~~D~~~~~r  337 (405)
T 3zu3_A          286 SAIPMM---PLYLS--LLFKVMKEKGTHEGCIEQVYSLYKD---SLCGDSPHMDQEGRLR  337 (405)
T ss_dssp             HTSTTH---HHHHH--HHHHHHHHHTCCCCHHHHHHHHHHH---TTSSSCCCBCTTSCEE
T ss_pred             hcCCCC---cHHHH--HHHHHHhcCCCcHHHHHHHHHHHhc---cccCCCCCcCCCcCCC
Confidence            654321   11111  2222789999999999999999987   6788989999886654

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=3.1e-42  Score=281.61  Aligned_cols=222  Identities=17%  Similarity=0.135  Sum_probs=193.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC-CCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ-GKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~~i   79 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+..+          ....++++|++|.++++++++++.+.++ +++
T Consensus         4 k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~i   73 (236)
T 1ooe_A            4 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA----------DSNILVDGNKNWTEQEQSILEQTASSLQGSQV   73 (236)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS----------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc----------cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCC
Confidence            58999999999999999999999999999999876532          1456778999999999999999999884 489


Q ss_pred             cEEEEcCCCCCCCCC-CCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           80 NILINNAAIAFVKPT-VDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        80 d~vi~~ag~~~~~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      |+||||||.....++ .+.+.++|++++++|+.+++.++++++|.|.+  .++||++||..+..+.++...|++||++++
T Consensus        74 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~  151 (236)
T 1ooe_A           74 DGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLLQLTGAAAAMGPTPSMIGYGMAKAAVH  151 (236)
T ss_dssp             EEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHHHH
T ss_pred             CEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEECchhhccCCCCcHHHHHHHHHHH
Confidence            999999998877777 77889999999999999999999999999965  489999999999999999999999999999


Q ss_pred             HHHHHHHHHHc--cCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHH-HHhCCCCCCcc
Q 024994          159 QLTKNLACEWA--KDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVA-FLCLPAASYIT  235 (259)
Q Consensus       159 ~~~~~~a~e~~--~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~-~l~~~~~~~~~  235 (259)
                      +|+++++.|+.  ++||++|+|+||+++|++.......             .+..+..+|+|+++.++ +++++...+++
T Consensus       152 ~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~-------------~~~~~~~~~~dvA~~i~~~l~s~~~~~~~  218 (236)
T 1ooe_A          152 HLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPN-------------ADHSSWTPLSFISEHLLKWTTETSSRPSS  218 (236)
T ss_dssp             HHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTT-------------CCGGGCBCHHHHHHHHHHHHHCGGGCCCT
T ss_pred             HHHHHHHHHhcccCCCeEEEEEecCcccCcchhhcCCC-------------ccccccCCHHHHHHHHHHHHcCCCccccc
Confidence            99999999998  8999999999999999975432111             11234567999999998 55588889999


Q ss_pred             ccEEEeCCCcee
Q 024994          236 GQIICVDGGVTV  247 (259)
Q Consensus       236 G~~l~~dgG~~~  247 (259)
                      |+.+.+|||...
T Consensus       219 G~~~~v~gg~~~  230 (236)
T 1ooe_A          219 GALLKITTENGT  230 (236)
T ss_dssp             TCEEEEEEETTE
T ss_pred             ccEEEEecCCCc
Confidence            999999998653

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=100.00  E-value=2.2e-41  Score=288.09  Aligned_cols=231  Identities=27%  Similarity=0.387  Sum_probs=200.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEee---------CChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCS---------RNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETV   71 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~---------r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   71 (259)
                      |++|||||++|||++++++|+++|++|++++         |+.++++...+++...+..+   .+|+++.++++++++++
T Consensus        10 k~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~---~~D~~~~~~~~~~~~~~   86 (319)
T 1gz6_A           10 RVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKA---VANYDSVEAGEKLVKTA   86 (319)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEE---EEECCCGGGHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeE---EEeCCCHHHHHHHHHHH
Confidence            7899999999999999999999999999964         56777777777776655433   58999999999999999


Q ss_pred             HHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhh
Q 024994           72 TSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYG  151 (259)
Q Consensus        72 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~  151 (259)
                      .+.+ +++|+||||||+....++.+.+.++|++++++|+.+++.++++++|+|++++.++||++||..+..+.+++..|+
T Consensus        87 ~~~~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~~~~~Y~  165 (319)
T 1gz6_A           87 LDTF-GRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYS  165 (319)
T ss_dssp             HHHT-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHH
T ss_pred             HHHc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCCHHHH
Confidence            9999 799999999999877778888999999999999999999999999999887789999999999988888999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCC
Q 024994          152 AYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAA  231 (259)
Q Consensus       152 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  231 (259)
                      +||+++++|+++++.|++++||+||+|+||++ |++......    ....          +..+|+|+++.++|++++ .
T Consensus       166 aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~~~----~~~~----------~~~~p~dvA~~~~~l~s~-~  229 (319)
T 1gz6_A          166 AAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETVMP----EDLV----------EALKPEYVAPLVLWLCHE-S  229 (319)
T ss_dssp             HHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGGSC----HHHH----------HHSCGGGTHHHHHHHTST-T
T ss_pred             HHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccccCC----hhhh----------ccCCHHHHHHHHHHHhCc-h
Confidence            99999999999999999999999999999998 877543211    1111          124799999999999987 4


Q ss_pred             CCccccEEEeCCCceeeecc
Q 024994          232 SYITGQIICVDGGVTVTVNV  251 (259)
Q Consensus       232 ~~~~G~~l~~dgG~~~~~~~  251 (259)
                      .+++|++|.+|||+.....+
T Consensus       230 ~~~tG~~~~v~GG~~~~~~~  249 (319)
T 1gz6_A          230 CEENGGLFEVGAGWIGKLRW  249 (319)
T ss_dssp             CCCCSCEEEEETTEEEEEEE
T ss_pred             hhcCCCEEEECCCeEEEEee
Confidence            68999999999998765544

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=100.00  E-value=8.5e-42  Score=281.90  Aligned_cols=234  Identities=19%  Similarity=0.246  Sum_probs=192.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCE-EEEeeCChhHHHHHHHHHHhc--CCcEEEEEecCCCH-HHHHHHHHHHHHHcC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAI-VHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSR-EQREKLIETVTSIFQ   76 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~   76 (259)
                      |++|||||++|||++++++|+++|++ |++++|+.+.  +..+++.+.  +.++.++.+|++|. ++++++++++.+.+ 
T Consensus         6 k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-   82 (254)
T 1sby_A            6 KNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL-   82 (254)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH-
T ss_pred             cEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhc-
Confidence            68999999999999999999999996 9999998642  112222222  45788999999998 99999999999999 


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC---CCEEEEecCCCccCCCCCChhhhhh
Q 024994           77 GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG---NGSIVFISSVGGVRGIPSVSLYGAY  153 (259)
Q Consensus        77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~~~ii~isS~~~~~~~~~~~~Y~~s  153 (259)
                      +++|+||||||..        +.++|++++++|+.+++.++++++|.|.+++   .++||++||..+..+.++...|++|
T Consensus        83 g~id~lv~~Ag~~--------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  154 (254)
T 1sby_A           83 KTVDILINGAGIL--------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSAS  154 (254)
T ss_dssp             SCCCEEEECCCCC--------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHHHH
T ss_pred             CCCCEEEECCccC--------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCCchHHHHH
Confidence            7899999999974        3467899999999999999999999997653   5899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 024994          154 KGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASY  233 (259)
Q Consensus       154 K~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  233 (259)
                      |+++++|+++++.++.+.||++|+|+||+++|++.....................|   ..+|+|+++.++++++   .+
T Consensus       155 K~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~dvA~~i~~~~~---~~  228 (254)
T 1sby_A          155 KAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHP---TQTSEQCGQNFVKAIE---AN  228 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSC---CEEHHHHHHHHHHHHH---HC
T ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHhcCC---CCCHHHHHHHHHHHHH---cC
Confidence            99999999999999987899999999999999986543210000011222333333   3489999999999985   47


Q ss_pred             ccccEEEeCCCceeeecc
Q 024994          234 ITGQIICVDGGVTVTVNV  251 (259)
Q Consensus       234 ~~G~~l~~dgG~~~~~~~  251 (259)
                      .+|+++.+|||....+.|
T Consensus       229 ~~G~~~~v~gG~~~~~~~  246 (254)
T 1sby_A          229 KNGAIWKLDLGTLEAIEW  246 (254)
T ss_dssp             CTTCEEEEETTEEEECCC
T ss_pred             CCCCEEEEeCCceeEecc
Confidence            899999999998776666

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=4.7e-41  Score=276.12  Aligned_cols=221  Identities=21%  Similarity=0.214  Sum_probs=190.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCC--CEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC-
Q 024994            1 MTALVTGGTRGIGHATVEELARFG--AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG-   77 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~-   77 (259)
                      |++|||||++|||++++++|+++|  ++|++++|+.+.++.+.+ +  .+.++.++.+|++|.++++++++++.+.+ + 
T Consensus         4 k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~-~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~   79 (250)
T 1yo6_A            4 GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS-I--KDSRVHVLPLTVTCDKSLDTFVSKVGEIV-GS   79 (250)
T ss_dssp             SEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT-C--CCTTEEEEECCTTCHHHHHHHHHHHHHHH-GG
T ss_pred             CEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHh-c--cCCceEEEEeecCCHHHHHHHHHHHHHhc-CC
Confidence            689999999999999999999999  999999999887755422 2  25579999999999999999999999988 5 


Q ss_pred             -CccEEEEcCCCCC-CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC------C-----CCEEEEecCCCccCCC
Q 024994           78 -KLNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS------G-----NGSIVFISSVGGVRGI  144 (259)
Q Consensus        78 -~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~-----~~~ii~isS~~~~~~~  144 (259)
                       ++|+||||||... ..++.+.+.+++++++++|+.+++.++++++|.|.++      +     .++||++||..+..+.
T Consensus        80 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~  159 (250)
T 1yo6_A           80 DGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITD  159 (250)
T ss_dssp             GCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTT
T ss_pred             CCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCC
Confidence             8999999999877 6778888999999999999999999999999999875      5     6899999999888776


Q ss_pred             -------CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHH
Q 024994          145 -------PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPD  217 (259)
Q Consensus       145 -------~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (259)
                             ++...|++||+++++|+++++.++.++||++++|+||+++|++...                    .+..+|+
T Consensus       160 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--------------------~~~~~~~  219 (250)
T 1yo6_A          160 NTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK--------------------NAALTVE  219 (250)
T ss_dssp             CCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC---------------------------------H
T ss_pred             cccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC--------------------CCCCCHH
Confidence                   6788999999999999999999999999999999999999998642                    1345799


Q ss_pred             HHHHHHHHHhCCCCCCccccEEEeCCCc
Q 024994          218 EVSSLVAFLCLPAASYITGQIICVDGGV  245 (259)
Q Consensus       218 ~va~~~~~l~~~~~~~~~G~~l~~dgG~  245 (259)
                      |+++.+++++++...+++|+++.+|||.
T Consensus       220 ~~a~~~~~~~~~~~~~~~G~~~~~~g~~  247 (250)
T 1yo6_A          220 QSTAELISSFNKLDNSHNGRFFMRNLKP  247 (250)
T ss_dssp             HHHHHHHHHHTTCCGGGTTCEEETTEEE
T ss_pred             HHHHHHHHHHhcccccCCCeEEEECCcC
Confidence            9999999999988888999999999985

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=100.00  E-value=1.4e-42  Score=300.47  Aligned_cols=242  Identities=17%  Similarity=0.118  Sum_probs=198.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHH-CCCEEEEeeCChhHHH------------HHHHHHHhcCCcEEEEEecCCCHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELAR-FGAIVHTCSRNQIELD------------ARLHEWKNKGFKVTGSVCDLSSREQREKL   67 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~-~G~~V~~~~r~~~~~~------------~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   67 (259)
                      |++||||||+|||+++|+.|++ +|++|++++|+.+..+            .+.+++...+.++..+.+|++|.++++++
T Consensus        62 KvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~~~  141 (422)
T 3s8m_A           62 KKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARAQV  141 (422)
T ss_dssp             SEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHH
T ss_pred             CEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHHHH
Confidence            7899999999999999999999 9999999999865432            23355556677899999999999999999


Q ss_pred             HHHHHHHcCCCccEEEEcCCCC-------------CCCCC---------------------CCCCHHHHHHHHHHhhHhH
Q 024994           68 IETVTSIFQGKLNILINNAAIA-------------FVKPT---------------------VDITAEDMSTVSSTNFESV  113 (259)
Q Consensus        68 ~~~~~~~~~~~id~vi~~ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~n~~~~  113 (259)
                      ++++.+.++|++|+||||||..             ...++                     .+.+.++|++++++|..+.
T Consensus       142 v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~~~  221 (422)
T 3s8m_A          142 IELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGGQD  221 (422)
T ss_dssp             HHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSHH
T ss_pred             HHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhchhH
Confidence            9999999844899999999972             22344                     3679999999999999998


Q ss_pred             H-HHHHHHHHHhHhCCCCEEEEecCCCccCCCCCC--hhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCC
Q 024994          114 F-HLSQLAHPLFKASGNGSIVFISSVGGVRGIPSV--SLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP  190 (259)
Q Consensus       114 ~-~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~--~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~  190 (259)
                      + .+++.+.+.+...++|+||++||.++..+.|.+  .+|++||+++.+|+|+++.|++++|||||+|+||++.|++...
T Consensus       222 ~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~~~~  301 (422)
T 3s8m_A          222 WELWIDALEGAGVLADGARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQASAA  301 (422)
T ss_dssp             HHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGG
T ss_pred             HHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcChhhhc
Confidence            7 788887654333346899999999999887766  9999999999999999999999999999999999999999865


Q ss_pred             CcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcc-ccEEEeCCCceee
Q 024994          191 FEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT-GQIICVDGGVTVT  248 (259)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~-G~~l~~dgG~~~~  248 (259)
                      .+..+   ...  .....|++|.+.|||+++.+.||+++. -|.+ |+...+|++..+.
T Consensus       302 ip~~~---~~~--~~~~~~m~r~G~pEdva~~v~~L~sd~-ly~~~~~~~~~d~~~~~r  354 (422)
T 3s8m_A          302 IPVMP---LYI--SMVYKIMKEKGLHEGTIEQLDRLFRER-LYRQDGQPAEVDEQNRLR  354 (422)
T ss_dssp             STHHH---HHH--HHHHHHHHHTTCCCCHHHHHHHHHHHT-TTCTTCCCCCCCTTSCEE
T ss_pred             CCCCh---HHH--HHHHhhhcCCcChHHHHHHHHHHhcch-hhccCCCCcccCCCCCCc
Confidence            43211   111  122337899999999999999999975 3665 7766699876654

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=100.00  E-value=3.1e-42  Score=284.78  Aligned_cols=220  Identities=25%  Similarity=0.358  Sum_probs=176.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.++++.          .   +++|++|.+++++++++.   . +++|
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~----------~---~~~Dl~~~~~v~~~~~~~---~-~~id   64 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA----------D---LSTAEGRKQAIADVLAKC---S-KGMD   64 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC----------C---TTSHHHHHHHHHHHHTTC---T-TCCS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc----------c---cccCCCCHHHHHHHHHHh---C-CCCC
Confidence            689999999999999999999999999999998765321          1   568999999998888743   2 5899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCcc-------------------
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV-------------------  141 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~-------------------  141 (259)
                      +||||||.....       +.|++++++|+.+++.++++++|.|.+++.++||++||..+.                   
T Consensus        65 ~lv~~Ag~~~~~-------~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~  137 (257)
T 1fjh_A           65 GLVLCAGLGPQT-------KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEA  137 (257)
T ss_dssp             EEEECCCCCTTC-------SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHH
T ss_pred             EEEECCCCCCCc-------ccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchh
Confidence            999999975411       128999999999999999999999988878999999999887                   


Q ss_pred             ---------CCCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhh--cCCC
Q 024994          142 ---------RGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIAR--QTPI  210 (259)
Q Consensus       142 ---------~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~  210 (259)
                               .+.++...|++||++++.|+++++.++.++||+||+|+||+++|++.........    ......  ..|.
T Consensus       138 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~----~~~~~~~~~~~~  213 (257)
T 1fjh_A          138 KARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPR----YGESIAKFVPPM  213 (257)
T ss_dssp             HHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-------------------------CCCST
T ss_pred             hhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchh----HHHHHHhccccc
Confidence                     3445678999999999999999999999999999999999999999765411111    111112  4677


Q ss_pred             CCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCceee
Q 024994          211 GRAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVT  248 (259)
Q Consensus       211 ~~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~  248 (259)
                      +++.+|+|++++++|++++.+.+++|+.+.+|||..++
T Consensus       214 ~~~~~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG~~~~  251 (257)
T 1fjh_A          214 GRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGIDAV  251 (257)
T ss_dssp             TSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHH
T ss_pred             CCCCCHHHHHHHHHHHhCchhcCCcCCEEEECCCcccc
Confidence            88999999999999999988889999999999998654

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=100.00  E-value=2.1e-41  Score=310.78  Aligned_cols=232  Identities=27%  Similarity=0.343  Sum_probs=190.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeC---------ChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSR---------NQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETV   71 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   71 (259)
                      |++|||||++|||+++|++|+++|++|++++|         +.+.++...+++...+..+   .+|++|.++++++++++
T Consensus        20 k~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~D~~d~~~~~~~~~~~   96 (613)
T 3oml_A           20 RVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEA---VADYNSVIDGAKVIETA   96 (613)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCE---EECCCCGGGHHHHHC--
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeE---EEEeCCHHHHHHHHHHH
Confidence            78999999999999999999999999999988         6777778888887665544   48999999999999999


Q ss_pred             HHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhh
Q 024994           72 TSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYG  151 (259)
Q Consensus        72 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~  151 (259)
                      .+.+ +++|+||||||+....++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||.++..+.++...|+
T Consensus        97 ~~~~-g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~~~~~~Y~  175 (613)
T 3oml_A           97 IKAF-GRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNYT  175 (613)
T ss_dssp             ---------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCCTTCHHHH
T ss_pred             HHHC-CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCChHHH
Confidence            9999 799999999999888888999999999999999999999999999999998889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCC
Q 024994          152 AYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAA  231 (259)
Q Consensus       152 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  231 (259)
                      +||+|+++|+++++.|++++||+||+|+||.+ |++......    ...          .+..+|+|++++++||+++. 
T Consensus       176 asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~~~----~~~----------~~~~~pedvA~~v~~L~s~~-  239 (613)
T 3oml_A          176 AAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGILP----DIL----------FNELKPKLIAPVVAYLCHES-  239 (613)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCCCC----HHH----------HTTCCGGGTHHHHHHTTSTT-
T ss_pred             HHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhhhhccc----hhh----------hhcCCHHHHHHHHHHhcCCC-
Confidence            99999999999999999999999999999975 565543221    111          12347999999999999988 


Q ss_pred             CCccccEEEeCCCceeeeccc
Q 024994          232 SYITGQIICVDGGVTVTVNVN  252 (259)
Q Consensus       232 ~~~~G~~l~~dgG~~~~~~~~  252 (259)
                      .++||++|.+|||......|.
T Consensus       240 ~~~tG~~i~vdGG~~~~~~~~  260 (613)
T 3oml_A          240 CEDNGSYIESAAGWATKLHMV  260 (613)
T ss_dssp             CCCCSCEEEEETTEEEEECCC
T ss_pred             cCCCceEEEECCCeEEEEEEE
Confidence            899999999999999887774

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=4.4e-40  Score=280.64  Aligned_cols=240  Identities=21%  Similarity=0.260  Sum_probs=189.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCC-----hhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRN-----QIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIF   75 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (259)
                      |++|||||++|||++++++|+++|++|++++|+     .+.++.+.+.+...+.++.++++|++|.++++++++++.+.+
T Consensus         6 k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~   85 (324)
T 3u9l_A            6 KIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGED   85 (324)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            689999999999999999999999999987765     556666666666667789999999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCC-CCCChhhhhhH
Q 024994           76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-IPSVSLYGAYK  154 (259)
Q Consensus        76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~-~~~~~~Y~~sK  154 (259)
                       +++|+||||||+...+++.+.+.++|++++++|+.+++.++++++|+|++++.++||++||.++..+ .+....|++||
T Consensus        86 -g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~~~~~Y~asK  164 (324)
T 3u9l_A           86 -GRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAPYFAAK  164 (324)
T ss_dssp             -SCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCSSCHHHHHHH
T ss_pred             -CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCCcchhHHHHH
Confidence             7999999999998888899999999999999999999999999999999888899999999988854 46678999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCC-CCchHHHHhhhh--------------cCCCCCCCCHHHH
Q 024994          155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEG-PEGSEFLDGIAR--------------QTPIGRAGEPDEV  219 (259)
Q Consensus       155 ~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~~~~~--------------~~~~~~~~~~~~v  219 (259)
                      +++++|+++++.|+++.||+|++|+||++.|++....... +........+..              ........+|+++
T Consensus       165 aa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~p~~v  244 (324)
T 3u9l_A          165 AAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEEIKKAFAAIVPPDADVSLV  244 (324)
T ss_dssp             HHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTTHHHHHHHHHHHTSCTTCCTHHH
T ss_pred             HHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccccCCHHHHHHHHHHhcCCCCCHHHH
Confidence            9999999999999999999999999999998765322111 111111111110              0011223578999


Q ss_pred             HHHHHHHhCCCCCCccccEEEeC
Q 024994          220 SSLVAFLCLPAASYITGQIICVD  242 (259)
Q Consensus       220 a~~~~~l~~~~~~~~~G~~l~~d  242 (259)
                      ++++++++.... ......+.++
T Consensus       245 A~aiv~~~~~~~-~~~~~~~~~g  266 (324)
T 3u9l_A          245 ADAIVRVVGTAS-GKRPFRVHVD  266 (324)
T ss_dssp             HHHHHHHHTSCT-TCCCSEEEEC
T ss_pred             HHHHHHHhcCCC-CCCCeEEEeC
Confidence            999988886442 1234556665

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=100.00  E-value=8.3e-40  Score=271.71  Aligned_cols=223  Identities=22%  Similarity=0.247  Sum_probs=198.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCC---CEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFG---AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG   77 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (259)
                      |++|||||++|||++++++|+++|   ++|++++|+.+..+.+ +++...+.++.++.+|++|.++++++++++.+.+ +
T Consensus        22 k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g   99 (267)
T 1sny_A           22 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVT-K   99 (267)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHH-G
T ss_pred             CEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhccCCceEEEEecCCChHHHHHHHHHHHHhc-C
Confidence            689999999999999999999999   9999999998766543 3444435689999999999999999999999988 5


Q ss_pred             --CccEEEEcCCCCC-CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC------C-----CCEEEEecCCCccCC
Q 024994           78 --KLNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS------G-----NGSIVFISSVGGVRG  143 (259)
Q Consensus        78 --~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~-----~~~ii~isS~~~~~~  143 (259)
                        ++|+||||||... ..++.+.+.+++++++++|+.+++.++++++|.|.+.      +     .++||++||..+..+
T Consensus       100 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~  179 (267)
T 1sny_A          100 DQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQ  179 (267)
T ss_dssp             GGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCST
T ss_pred             CCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEeccccccc
Confidence              7999999999876 6677888999999999999999999999999999865      3     589999999988776


Q ss_pred             CC---CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHH
Q 024994          144 IP---SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVS  220 (259)
Q Consensus       144 ~~---~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va  220 (259)
                      .+   +...|++||+++++|+++++.++.++||++++|+||+++|++...                    ....+|++++
T Consensus       180 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--------------------~~~~~~~~~a  239 (267)
T 1sny_A          180 GNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS--------------------SAPLDVPTST  239 (267)
T ss_dssp             TCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT--------------------TCSBCHHHHH
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC--------------------CCCCCHHHHH
Confidence            53   678899999999999999999999999999999999999998642                    1345799999


Q ss_pred             HHHHHHhCCCCCCccccEEEeCCCc
Q 024994          221 SLVAFLCLPAASYITGQIICVDGGV  245 (259)
Q Consensus       221 ~~~~~l~~~~~~~~~G~~l~~dgG~  245 (259)
                      +.++++++.....++|+.+.+||+.
T Consensus       240 ~~~~~~~~~~~~~~~G~~~~~~g~~  264 (267)
T 1sny_A          240 GQIVQTISKLGEKQNGGFVNYDGTP  264 (267)
T ss_dssp             HHHHHHHHHCCGGGTTCEECTTSCB
T ss_pred             HHHHHHHHhcCcCCCCcEEccCCcC
Confidence            9999999888889999999999985

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=7.4e-40  Score=272.99  Aligned_cols=215  Identities=26%  Similarity=0.325  Sum_probs=193.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|.++++++++++.+.+ +++|
T Consensus        32 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g~iD  110 (272)
T 1yb1_A           32 EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI-GDVS  110 (272)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT-CCCS
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHC-CCCc
Confidence            689999999999999999999999999999999998888888887767789999999999999999999999998 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.+++.++|.|.+++.++||++||..+..+.++...|++||+++++|
T Consensus       111 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~l  190 (272)
T 1yb1_A          111 ILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGF  190 (272)
T ss_dssp             EEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCchhHHHHHHHHHHH
Confidence            99999998877777888899999999999999999999999999988789999999999998888889999999999999


Q ss_pred             HHHHHHHHc---cCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCC
Q 024994          161 TKNLACEWA---KDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAA  231 (259)
Q Consensus       161 ~~~~a~e~~---~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  231 (259)
                      +++++.|+.   +.||++++|+||+++|++...     .   .       .+.+++.+|+|+++.+++++....
T Consensus       191 ~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~-----~---~-------~~~~~~~~~~dva~~i~~~~~~~~  249 (272)
T 1yb1_A          191 HKTLTDELAALQITGVKTTCLCPNFVNTGFIKN-----P---S-------TSLGPTLEPEEVVNRLMHGILTEQ  249 (272)
T ss_dssp             HHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC-----T---H-------HHHCCCCCHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc-----c---c-------ccccCCCCHHHHHHHHHHHHHcCC
Confidence            999999997   679999999999999998531     0   0       123567899999999999997543

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=100.00  E-value=1.4e-40  Score=284.28  Aligned_cols=236  Identities=20%  Similarity=0.249  Sum_probs=186.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHH---HHHHH---hcCCcEEEEEecCCCHHHHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDAR---LHEWK---NKGFKVTGSVCDLSSREQREKLIETVTSI   74 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~---~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   74 (259)
                      |++|||||++|||++++++|+++|++|++++|+...++..   .++..   ..+.++.++++|++|.++++++++++.  
T Consensus         3 k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~--   80 (327)
T 1jtv_A            3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT--   80 (327)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT--
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh--
Confidence            6899999999999999999999999998888765443332   22222   123578999999999999999999873  


Q ss_pred             cCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhH
Q 024994           75 FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYK  154 (259)
Q Consensus        75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  154 (259)
                      + +++|+||||||+....++.+.+.++|++++++|+.+++.++++++|+|.+++.++||++||..+..+.+....|++||
T Consensus        81 ~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~~~~Y~aSK  159 (327)
T 1jtv_A           81 E-GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASK  159 (327)
T ss_dssp             T-SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHHHH
T ss_pred             c-CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCCChHHHHHH
Confidence            4 689999999998877788889999999999999999999999999999877789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCC------chHHH---Hhhhh--cCCCCCC-CCHHHHHHH
Q 024994          155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPE------GSEFL---DGIAR--QTPIGRA-GEPDEVSSL  222 (259)
Q Consensus       155 ~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~------~~~~~---~~~~~--~~~~~~~-~~~~~va~~  222 (259)
                      +++++|+++++.|+.+.||+||+|+||+|+|++.........      .....   ..+..  ..++++. .+|+|+++.
T Consensus       160 ~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~  239 (327)
T 1jtv_A          160 FALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEV  239 (327)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHHHhhhhcCCCHHHHHHH
Confidence            999999999999999999999999999999999765322100      00011   11110  1122343 589999999


Q ss_pred             HHHHhCC---CCCCccccEE
Q 024994          223 VAFLCLP---AASYITGQII  239 (259)
Q Consensus       223 ~~~l~~~---~~~~~~G~~l  239 (259)
                      ++++++.   ..+|++|+.+
T Consensus       240 i~~l~~~~~~~~~~~tg~~~  259 (327)
T 1jtv_A          240 FLTALRAPKPTLRYFTTERF  259 (327)
T ss_dssp             HHHHHHCSSCCSEEESCSTT
T ss_pred             HHHHHcCCCCCeEEEeCchH
Confidence            9999874   3457777653

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=100.00  E-value=3.9e-40  Score=270.61  Aligned_cols=221  Identities=25%  Similarity=0.269  Sum_probs=161.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||++++++|++ |++|++++|+.+.++...+     ..++.++.+|+++.++ .+.+.+..+.+ +++|
T Consensus         6 k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~-~~~~~~~~~~~-~~id   77 (245)
T 3e9n_A            6 KIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-----IEGVEPIESDIVKEVL-EEGGVDKLKNL-DHVD   77 (245)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-----STTEEEEECCHHHHHH-TSSSCGGGTTC-SCCS
T ss_pred             CEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-----hcCCcceecccchHHH-HHHHHHHHHhc-CCCC
Confidence            7899999999999999999988 9999999999888766543     2368899999998876 44444445556 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.++++++|.|++.+ ++||++||..+..+.++...|++||+++++|
T Consensus        78 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~  156 (245)
T 3e9n_A           78 TLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGPHPGNTIYAASKHALRGL  156 (245)
T ss_dssp             EEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC----------CHHHHHHHHHHHHH
T ss_pred             EEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCCCCchHHHHHHHHHHHH
Confidence            999999998878888889999999999999999999999999998764 9999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC  240 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~  240 (259)
                      +++++.|++++||+||+|+||+++|++........         ....+.+++.+|+|++++++|+++...   ++++++
T Consensus       157 ~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~---------~~~~~~~~~~~p~dvA~~i~~l~~~~~---~~~~~~  224 (245)
T 3e9n_A          157 ADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDSQ---------GTNFRPEIYIEPKEIANAIRFVIDAGE---TTQITN  224 (245)
T ss_dssp             HHHHHHHHGGGTCEEEEEEECCC-------------------------CCGGGSCHHHHHHHHHHHHTSCT---TEEEEE
T ss_pred             HHHHHHHhhhcCeEEEEEecCCccCchhhhhhhhh---------hcccccccCCCHHHHHHHHHHHHcCCC---ccceee
Confidence            99999999999999999999999999876543221         123455678899999999999997654   455555


Q ss_pred             eC
Q 024994          241 VD  242 (259)
Q Consensus       241 ~d  242 (259)
                      +|
T Consensus       225 i~  226 (245)
T 3e9n_A          225 VD  226 (245)
T ss_dssp             EE
T ss_pred             eE
Confidence            54

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=1.2e-38  Score=269.83  Aligned_cols=216  Identities=25%  Similarity=0.299  Sum_probs=187.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcC-CcEEEEEecCCCH-HHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG-FKVTGSVCDLSSR-EQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+ .++.++++|++|. ++++++++++.+.+ ++
T Consensus        13 k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~-g~   91 (311)
T 3o26_A           13 RCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHF-GK   91 (311)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHH-SS
T ss_pred             cEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhC-CC
Confidence            689999999999999999999999999999999999998888887654 4799999999997 99999999999999 79


Q ss_pred             ccEEEEcCCCCCC------------------------------CCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC
Q 024994           79 LNILINNAAIAFV------------------------------KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG  128 (259)
Q Consensus        79 id~vi~~ag~~~~------------------------------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~  128 (259)
                      +|+||||||+...                              .++.+.+.+++++++++|+.+++.++++++|+|.+++
T Consensus        92 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~  171 (311)
T 3o26_A           92 LDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSD  171 (311)
T ss_dssp             CCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS
T ss_pred             CCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhccCC
Confidence            9999999998642                              1445678999999999999999999999999998887


Q ss_pred             CCEEEEecCCCccCCC-------------------------------------------CCChhhhhhHHHHHHHHHHHH
Q 024994          129 NGSIVFISSVGGVRGI-------------------------------------------PSVSLYGAYKGAMNQLTKNLA  165 (259)
Q Consensus       129 ~~~ii~isS~~~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~~a  165 (259)
                      .++||++||..+..+.                                           ++...|++||+++++|+++++
T Consensus       172 ~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la  251 (311)
T 3o26_A          172 SPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRVLA  251 (311)
T ss_dssp             SCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHHHHHH
Confidence            8999999999887653                                           356789999999999999999


Q ss_pred             HHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          166 CEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       166 ~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      .++.  +|+||+|+||+|.|++.....                    ..++++.++.+++++.......+|..+
T Consensus       252 ~e~~--~i~v~~v~PG~v~T~~~~~~~--------------------~~~~~~~a~~~~~~~~~~~~~~~g~~~  303 (311)
T 3o26_A          252 NKIP--KFQVNCVCPGLVKTEMNYGIG--------------------NYTAEEGAEHVVRIALFPDDGPSGFFY  303 (311)
T ss_dssp             HHCT--TSEEEEECCCSBCSGGGTTCC--------------------SBCHHHHHHHHHHHHTCCSSCCCSCEE
T ss_pred             hhcC--CceEEEecCCceecCCcCCCC--------------------CCCHHHHHHHHHHHHhCCCCCCCceEe
Confidence            9985  499999999999999875431                    136899999999998755555555544

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=100.00  E-value=1.5e-38  Score=264.69  Aligned_cols=219  Identities=28%  Similarity=0.357  Sum_probs=189.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHH-CCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELAR-FGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||++|||++++++|++ +|++|++++|+.+..+...+++...+.++.++.+|++|.++++++++++.+.+ +++
T Consensus         5 k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g~i   83 (276)
T 1wma_A            5 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY-GGL   83 (276)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH-SSE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhc-CCC
Confidence            6899999999999999999999 99999999999998888888887666788999999999999999999999999 789


Q ss_pred             cEEEEcCCCCCCCCCCCCC-HHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCC---------------
Q 024994           80 NILINNAAIAFVKPTVDIT-AEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG---------------  143 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~-~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~---------------  143 (259)
                      |+||||||...... .+.+ .+++++++++|+.+++.++++++|.|.+  .++||++||..+..+               
T Consensus        84 d~li~~Ag~~~~~~-~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~  160 (276)
T 1wma_A           84 DVLVNNAGIAFKVA-DPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP--QGRVVNVSSIMSVRALKSCSPELQQKFRSE  160 (276)
T ss_dssp             EEEEECCCCCCCTT-CCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHHHHTSCHHHHHHHHCS
T ss_pred             CEEEECCcccccCC-CccccHHHHHhhhheeeeeHHHHHHHHHHhhCC--CCEEEEECChhhhcccccCChhHHhhcccc
Confidence            99999999875443 3334 5899999999999999999999999865  389999999876532               


Q ss_pred             --------------------------CCCChhhhhhHHHHHHHHHHHHHHHcc----CCceEEEEeCCceeCCCCCCCcC
Q 024994          144 --------------------------IPSVSLYGAYKGAMNQLTKNLACEWAK----DNIRTNTVAPWVIKTSMIKPFEE  193 (259)
Q Consensus       144 --------------------------~~~~~~Y~~sK~a~~~~~~~~a~e~~~----~gi~v~~v~pg~v~t~~~~~~~~  193 (259)
                                                ..+...|++||++++.|+++++.++.+    .||++++|+||++.|++...   
T Consensus       161 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~---  237 (276)
T 1wma_A          161 TITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP---  237 (276)
T ss_dssp             SCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT---
T ss_pred             ccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc---
Confidence                                      012378999999999999999999987    79999999999999998642   


Q ss_pred             CCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCC--CCCccccEEEeCCC
Q 024994          194 GPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPA--ASYITGQIICVDGG  244 (259)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~--~~~~~G~~l~~dgG  244 (259)
                                       .+..+|+|+++.++|+++..  ..+++|++|. +++
T Consensus       238 -----------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~-~~~  272 (276)
T 1wma_A          238 -----------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS-EKR  272 (276)
T ss_dssp             -----------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE-TTE
T ss_pred             -----------------cccCChhHhhhhHhhhhcCcccccccCceEec-cCc
Confidence                             13568999999999999844  3699999887 554

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=100.00  E-value=6e-40  Score=286.13  Aligned_cols=240  Identities=14%  Similarity=0.068  Sum_probs=199.1

Q ss_pred             CEEEEEcCcchHHHH--HHHHHHHCCCEEEEeeCChhH------------HHHHHHHHHhcCCcEEEEEecCCCHHHHHH
Q 024994            1 MTALVTGGTRGIGHA--TVEELARFGAIVHTCSRNQIE------------LDARLHEWKNKGFKVTGSVCDLSSREQREK   66 (259)
Q Consensus         1 k~~lItG~s~giG~~--~a~~l~~~G~~V~~~~r~~~~------------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   66 (259)
                      |++|||||++|||++  +++.|+++|++|++++|+...            .+.+.+.+...+.++.++.+|++|.+++++
T Consensus        61 K~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~v~~  140 (418)
T 4eue_A           61 KKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNETKDK  140 (418)
T ss_dssp             SEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHHHHH
Confidence            789999999999999  999999999999999987543            234444445557789999999999999999


Q ss_pred             HHHHHHHHcCCCccEEEEcCCCC-------------CCCCC---------------------CCCCHHHHHHHHHHhhHh
Q 024994           67 LIETVTSIFQGKLNILINNAAIA-------------FVKPT---------------------VDITAEDMSTVSSTNFES  112 (259)
Q Consensus        67 ~~~~~~~~~~~~id~vi~~ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~n~~~  112 (259)
                      +++++.+.+ +++|+||||||..             ...++                     .+.+.++|++++++|..+
T Consensus       141 ~v~~i~~~~-G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~~~  219 (418)
T 4eue_A          141 VIKYIKDEF-GKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMGGE  219 (418)
T ss_dssp             HHHHHHHTT-CCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHSSH
T ss_pred             HHHHHHHHc-CCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhhHH
Confidence            999999999 7999999999974             22333                     356899999999999998


Q ss_pred             HH-HHHHHHHHHhHhCCCCEEEEecCCCccCCCCCC--hhhhhhHHHHHHHHHHHHHHHcc-CCceEEEEeCCceeCCCC
Q 024994          113 VF-HLSQLAHPLFKASGNGSIVFISSVGGVRGIPSV--SLYGAYKGAMNQLTKNLACEWAK-DNIRTNTVAPWVIKTSMI  188 (259)
Q Consensus       113 ~~-~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~--~~Y~~sK~a~~~~~~~~a~e~~~-~gi~v~~v~pg~v~t~~~  188 (259)
                      .+ .+++.+.+.+...++++||++||.++..+.|.+  ..|++||+++++|+++++.|+++ +|||||+|+||++.|++.
T Consensus       220 ~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T~~s  299 (418)
T 4eue_A          220 DWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVTKAS  299 (418)
T ss_dssp             HHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCCHHH
T ss_pred             HHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcChhh
Confidence            88 777877765544456899999999999988887  99999999999999999999999 999999999999999987


Q ss_pred             CCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCceee
Q 024994          189 KPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVT  248 (259)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~  248 (259)
                      ...+..+   ....  ....++++.+++|++++.+.||+++  .+.+|+.+.+|+|..+.
T Consensus       300 ~~ip~~p---~y~~--~~~~~mk~~G~~E~v~e~~~~L~sd--~~~~g~~~~~D~~~~~r  352 (418)
T 4eue_A          300 AYIPTFP---LYAA--ILYKVMKEKNIHENCIMQIERMFSE--KIYSNEKIQFDDKGRLR  352 (418)
T ss_dssp             HTSTTHH---HHHH--HHHHHHHHTTCCCCHHHHHHHHHHH--TTSSSSCCCCCTTSCEE
T ss_pred             hcCCCCc---HHHH--HHHHHHhhcCChHHHHHHHHHHhhc--cccCCCccccCCCceee
Confidence            6553211   1111  1222577889999999999999976  67899999999876654

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=100.00  E-value=1.3e-36  Score=255.01  Aligned_cols=214  Identities=23%  Similarity=0.253  Sum_probs=184.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF-KVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||+||||++++++|+++|++|++++|+.+++++..+++...+. ++.++.+|++|.++++++++++.+.+ +++
T Consensus        29 k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~-g~i  107 (286)
T 1xu9_A           29 KKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM-GGL  107 (286)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH-TSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHc-CCC
Confidence            6899999999999999999999999999999999998888777765443 78999999999999999999999998 699


Q ss_pred             cEEEEc-CCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           80 NILINN-AAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        80 d~vi~~-ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      |+|||| +|... .+..+.+.+++++++++|+.+++.++++++|.|.+. .++||++||..+..+.++...|++||++++
T Consensus       108 D~li~naag~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK~a~~  185 (286)
T 1xu9_A          108 DMLILNHITNTS-LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAAYSASKFALD  185 (286)
T ss_dssp             SEEEECCCCCCC-CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSCCTTCHHHHHHHHHHH
T ss_pred             CEEEECCccCCC-CccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC-CCEEEEECCcccccCCCCccHHHHHHHHHH
Confidence            999999 56543 345567899999999999999999999999998765 589999999999999999999999999999


Q ss_pred             HHHHHHHHHH--ccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 024994          159 QLTKNLACEW--AKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPA  230 (259)
Q Consensus       159 ~~~~~~a~e~--~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  230 (259)
                      +|+++++.|+  ...+|+++.|+||+++|++.......             .......+|+|+++.++..+...
T Consensus       186 ~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~-------------~~~~~~~~~~~vA~~i~~~~~~~  246 (286)
T 1xu9_A          186 GFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSG-------------IVHMQAAPKEECALEIIKGGALR  246 (286)
T ss_dssp             HHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCG-------------GGGGGCBCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHhccc-------------cccCCCCCHHHHHHHHHHHHhcC
Confidence            9999999999  57799999999999999975321100             00113468999999999888643

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=100.00  E-value=1.4e-36  Score=242.12  Aligned_cols=199  Identities=23%  Similarity=0.231  Sum_probs=176.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+||||++++++|+ +|++|++++|+.+                 ++.+|++|.++++++++++     +++|
T Consensus         4 M~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-----------------~~~~D~~~~~~~~~~~~~~-----~~~d   60 (202)
T 3d7l_A            4 MKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-----------------DVTVDITNIDSIKKMYEQV-----GKVD   60 (202)
T ss_dssp             CEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-----------------SEECCTTCHHHHHHHHHHH-----CCEE
T ss_pred             cEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-----------------ceeeecCCHHHHHHHHHHh-----CCCC
Confidence            389999999999999999999 9999999999864                 4689999999999988765     6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.+++++.|.|.+  .++||++||..+..+.++...|+++|++++.+
T Consensus        61 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~  138 (202)
T 3d7l_A           61 AIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLND--KGSFTLTTGIMMEDPIVQGASAAMANGAVTAF  138 (202)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEE--EEEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhcc--CCEEEEEcchhhcCCCCccHHHHHHHHHHHHH
Confidence            9999999877777888899999999999999999999999998854  38999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC  240 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~  240 (259)
                      +++++.|+ ++||+++.++||+++|++..              .....+..++.+++|++++++++++   .+++|+.++
T Consensus       139 ~~~~~~e~-~~gi~v~~v~pg~v~~~~~~--------------~~~~~~~~~~~~~~dva~~~~~~~~---~~~~G~~~~  200 (202)
T 3d7l_A          139 AKSAAIEM-PRGIRINTVSPNVLEESWDK--------------LEPFFEGFLPVPAAKVARAFEKSVF---GAQTGESYQ  200 (202)
T ss_dssp             HHHHTTSC-STTCEEEEEEECCBGGGHHH--------------HGGGSTTCCCBCHHHHHHHHHHHHH---SCCCSCEEE
T ss_pred             HHHHHHHc-cCCeEEEEEecCccCCchhh--------------hhhhccccCCCCHHHHHHHHHHhhh---ccccCceEe
Confidence            99999998 78999999999999998642              1123345678899999999988873   568999999


Q ss_pred             eC
Q 024994          241 VD  242 (259)
Q Consensus       241 ~d  242 (259)
                      +|
T Consensus       201 vd  202 (202)
T 3d7l_A          201 VY  202 (202)
T ss_dssp             EC
T ss_pred             cC
Confidence            87

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=100.00  E-value=2.4e-37  Score=254.67  Aligned_cols=221  Identities=27%  Similarity=0.385  Sum_probs=183.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+||||++++++|+++|++|++++|+.++.+.             .+.+|++|.+++++++++.   . +++|
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------------~~~~D~~~~~~~~~~~~~~---~-~~~d   64 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA-------------DLSTPGGRETAVAAVLDRC---G-GVLD   64 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------------CTTSHHHHHHHHHHHHHHH---T-TCCS
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc-------------cccCCcccHHHHHHHHHHc---C-CCcc
Confidence            689999999999999999999999999999998764321             1568999999988888754   2 5899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCC----------------
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI----------------  144 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~----------------  144 (259)
                      +||||||....       .+++++++++|+.+++.+++++.|.|.+.+.++||++||..+..+.                
T Consensus        65 ~vi~~Ag~~~~-------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  137 (255)
T 2dkn_A           65 GLVCCAGVGVT-------AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEA  137 (255)
T ss_dssp             EEEECCCCCTT-------SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHH
T ss_pred             EEEECCCCCCc-------chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchh
Confidence            99999997541       1237899999999999999999999988777999999999887654                


Q ss_pred             ----------CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcC--CCCC
Q 024994          145 ----------PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQT--PIGR  212 (259)
Q Consensus       145 ----------~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~  212 (259)
                                ++...|+.||++++.+++.++.++.+.||+++.++||+++|++..........    .......  +.++
T Consensus       138 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~  213 (255)
T 2dkn_A          138 RAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRY----GESTRRFVAPLGR  213 (255)
T ss_dssp             HHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTTT----HHHHHSCCCTTSS
T ss_pred             hhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchhh----HHHHHHHHHHhcC
Confidence                      46678999999999999999999988999999999999999976543111111    1111222  7778


Q ss_pred             CCCHHHHHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          213 AGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       213 ~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      +.+++|+++++++++++...+++|+.+++|||..++.
T Consensus       214 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~  250 (255)
T 2dkn_A          214 GSEPREVAEAIAFLLGPQASFIHGSVLFVDGGMDALM  250 (255)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHHH
T ss_pred             CCCHHHHHHHHHHHhCCCcccceeeEEEecCCeEeee
Confidence            9999999999999998777789999999999987653

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=100.00  E-value=1.1e-35  Score=237.73  Aligned_cols=200  Identities=19%  Similarity=0.206  Sum_probs=172.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+||||++++++|+++  +|++++|+.++++...+++.    . .++++|++|.+++++++++    + +++|
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~----~-~~~~~D~~~~~~~~~~~~~----~-~~id   68 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVG----A-RALPADLADELEAKALLEE----A-GPLD   68 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHT----C-EECCCCTTSHHHHHHHHHH----H-CSEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhcc----C-cEEEeeCCCHHHHHHHHHh----c-CCCC
Confidence            78999999999999999999999  99999999988877666553    1 7888999999999999887    4 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.+++++    .+.+.++||++||..+..+.++...|+++|++++.+
T Consensus        69 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~  144 (207)
T 2yut_A           69 LLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAY  144 (207)
T ss_dssp             EEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHC----CEEEEEEEEEECCCHHHHSSTTBHHHHHHHHHHHHH
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH----HhcCCcEEEEEcChhhccCCCCcchHHHHHHHHHHH
Confidence            9999999887778888899999999999999999999988    344468999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCC
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAA  231 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  231 (259)
                      +++++.+++++||+++.++||+++|++...               ...+.+++.+++|++++++++++...
T Consensus       145 ~~~~~~~~~~~gi~v~~v~pg~v~t~~~~~---------------~~~~~~~~~~~~dva~~~~~~~~~~~  200 (207)
T 2yut_A          145 LEAARKELLREGVHLVLVRLPAVATGLWAP---------------LGGPPKGALSPEEAARKVLEGLFREP  200 (207)
T ss_dssp             HHHHHHHHHTTTCEEEEECCCCBCSGGGGG---------------GTSCCTTCBCHHHHHHHHHHHHC--C
T ss_pred             HHHHHHHHhhhCCEEEEEecCcccCCCccc---------------cCCCCCCCCCHHHHHHHHHHHHhCCC
Confidence            999999999999999999999999987321               11345778899999999999997654

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=100.00  E-value=1.1e-36  Score=299.40  Aligned_cols=237  Identities=19%  Similarity=0.191  Sum_probs=197.8

Q ss_pred             CEEEEEcCcch-HHHHHHHHHHHCCCEEEEe-eCChhHHHHHHHHHHh----cCCcEEEEEecCCCHHHHHHHHHHHHHH
Q 024994            1 MTALVTGGTRG-IGHATVEELARFGAIVHTC-SRNQIELDARLHEWKN----KGFKVTGSVCDLSSREQREKLIETVTSI   74 (259)
Q Consensus         1 k~~lItG~s~g-iG~~~a~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~   74 (259)
                      |++|||||++| ||+++|++|+++|++|+++ +|+.+.+++..+++..    .+.++.++.+|++|.++++++++++.+.
T Consensus       676 KvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i~~~  755 (1887)
T 2uv8_A          676 KYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYDT  755 (1887)
T ss_dssp             CEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHSC
T ss_pred             CEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHHHHh
Confidence            68999999998 9999999999999999998 6887777666665532    2567999999999999999999999987


Q ss_pred             -----cCC-CccEEEEcCCCCCCC-CCCCCC--HHHHHHHHHHhhHhHHHHHHHH--HHHhHhCCCCEEEEecCCCccCC
Q 024994           75 -----FQG-KLNILINNAAIAFVK-PTVDIT--AEDMSTVSSTNFESVFHLSQLA--HPLFKASGNGSIVFISSVGGVRG  143 (259)
Q Consensus        75 -----~~~-~id~vi~~ag~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~~~~~~--~~~~~~~~~~~ii~isS~~~~~~  143 (259)
                           + + ++|+||||||+...+ ++.+.+  .++|+++|++|+.+++.+++.+  +|.|.+++.++||++||..+..+
T Consensus       756 ~~~~G~-G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag~~g  834 (1887)
T 2uv8_A          756 EKNGGL-GWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG  834 (1887)
T ss_dssp             TTTTSC-CCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTTCSS
T ss_pred             cccccc-CCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHhccC
Confidence                 5 5 899999999998777 788888  8999999999999999999988  78887766689999999998887


Q ss_pred             CCCChhhhhhHHHHHHH-HHHHHHHHccCCceEEEEeCCcee-CCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHH
Q 024994          144 IPSVSLYGAYKGAMNQL-TKNLACEWAKDNIRTNTVAPWVIK-TSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSS  221 (259)
Q Consensus       144 ~~~~~~Y~~sK~a~~~~-~~~~a~e~~~~gi~v~~v~pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~  221 (259)
                        +...|++||+++++| ++.++.++.+. |+||+|+||+++ |++....   ..    ........|. +..+|+|+++
T Consensus       835 --g~~aYaASKAAL~~Lttr~lA~ela~~-IrVNaV~PG~V~tT~m~~~~---~~----~~~~~~~~pl-r~~sPEEVA~  903 (1887)
T 2uv8_A          835 --GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSAN---NI----IAEGIEKMGV-RTFSQKEMAF  903 (1887)
T ss_dssp             --CBTTHHHHHHHGGGHHHHHHHSSCTTT-EEEEEEEECCEECC-----C---CT----THHHHHTTSC-CCEEHHHHHH
T ss_pred             --CCchHHHHHHHHHHHHHHHHHHHhCCC-eEEEEEEecccccccccccc---hh----HHHHHHhcCC-CCCCHHHHHH
Confidence              678999999999999 99999999887 999999999999 7876531   11    1122233444 6679999999


Q ss_pred             HHHHHhCCC-CCCccccEEEeC--CCceeee
Q 024994          222 LVAFLCLPA-ASYITGQIICVD--GGVTVTV  249 (259)
Q Consensus       222 ~~~~l~~~~-~~~~~G~~l~~d--gG~~~~~  249 (259)
                      .++||+++. ..+++|+.+.+|  ||.....
T Consensus       904 avlfLaSd~~as~iTGq~I~VDVDGG~~~~~  934 (1887)
T 2uv8_A          904 NLLGLLTPEVVELCQKSPVMADLNGGLQFVP  934 (1887)
T ss_dssp             HHHGGGSHHHHHHHHHSCEEEEESCSTTTSS
T ss_pred             HHHHHhCCCccccccCcEEEEECCCCeeccc
Confidence            999999987 679999999875  9976543

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=100.00  E-value=1.8e-35  Score=290.32  Aligned_cols=236  Identities=19%  Similarity=0.206  Sum_probs=196.9

Q ss_pred             CEEEEEcCcch-HHHHHHHHHHHCCCEEEEee-CChhHHHHHHHHHH----hcCCcEEEEEecCCCHHHHHHHHHHHHHH
Q 024994            1 MTALVTGGTRG-IGHATVEELARFGAIVHTCS-RNQIELDARLHEWK----NKGFKVTGSVCDLSSREQREKLIETVTSI   74 (259)
Q Consensus         1 k~~lItG~s~g-iG~~~a~~l~~~G~~V~~~~-r~~~~~~~~~~~~~----~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   74 (259)
                      |++|||||++| ||+++|++|+++|++|++++ |+.+.+++..+++.    ..+.++.++.+|++|.++++++++++.+.
T Consensus       653 KvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i~~~  732 (1878)
T 2uv9_A          653 KHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYIYDT  732 (1878)
T ss_dssp             CEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHCS
T ss_pred             CEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            68999999999 99999999999999999995 66666655554442    23567999999999999999999999987


Q ss_pred             ---cCC-CccEEEEcCCCCCCC-CCCCCC--HHHHHHHHHHhhHhHHHHHHH--HHHHhHhCCCCEEEEecCCCccCCCC
Q 024994           75 ---FQG-KLNILINNAAIAFVK-PTVDIT--AEDMSTVSSTNFESVFHLSQL--AHPLFKASGNGSIVFISSVGGVRGIP  145 (259)
Q Consensus        75 ---~~~-~id~vi~~ag~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~~~~~--~~~~~~~~~~~~ii~isS~~~~~~~~  145 (259)
                         + + ++|+||||||+...+ ++.+.+  .++|+++|++|+.+++.+++.  ++|.|.+++.++||++||..+..+  
T Consensus       733 ~~~~-G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~g--  809 (1878)
T 2uv9_A          733 KNGL-GWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTFG--  809 (1878)
T ss_dssp             SSSC-CCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSSS--
T ss_pred             hccc-CCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhccC--
Confidence               7 6 899999999998776 888888  899999999999999999987  678887666689999999999887  


Q ss_pred             CChhhhhhHHHHHHHHHHHHHH-HccCCceEEEEeCCcee-CCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHH
Q 024994          146 SVSLYGAYKGAMNQLTKNLACE-WAKDNIRTNTVAPWVIK-TSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLV  223 (259)
Q Consensus       146 ~~~~Y~~sK~a~~~~~~~~a~e-~~~~gi~v~~v~pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  223 (259)
                      +...|++||+++++|++.++.+ +++. |+||+|+||+++ |++....       ..........+. +..+|+|+++++
T Consensus       810 g~~aYaASKAAL~aLt~~laAeEla~~-IrVNaVaPG~V~gT~m~~~~-------~~~~~~~~~~pl-r~~sPeEVA~av  880 (1878)
T 2uv9_A          810 NDGLYSESKLALETLFNRWYSESWGNY-LTICGAVIGWTRGTGLMSAN-------NLVAEGVEKLGV-RTFSQQEMAFNL  880 (1878)
T ss_dssp             CCSSHHHHHHHHTTHHHHHHHSTTTTT-EEEEEEEECCBCCTTSCSHH-------HHTHHHHHTTTC-CCBCHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEecceecCcccccc-------hhhHHHHHhcCC-CCCCHHHHHHHH
Confidence            4788999999999999876554 7766 999999999999 9986431       111222233444 566999999999


Q ss_pred             HHHhCCCC-CCccccEEEe--CCCceee
Q 024994          224 AFLCLPAA-SYITGQIICV--DGGVTVT  248 (259)
Q Consensus       224 ~~l~~~~~-~~~~G~~l~~--dgG~~~~  248 (259)
                      +||+++.. .++||+.+.+  |||....
T Consensus       881 lfLaSd~a~s~iTGq~I~VDVDGG~~~~  908 (1878)
T 2uv9_A          881 LGLMAPAIVNLCQSDPVFADLNGGLQFI  908 (1878)
T ss_dssp             HHHHSHHHHHHHTTSCEEEEESCSGGGC
T ss_pred             HHHhCCcccccccCcEEEEEcCCCcccc
Confidence            99999876 7999999987  5997654

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.8e-37  Score=295.30  Aligned_cols=237  Identities=19%  Similarity=0.194  Sum_probs=198.9

Q ss_pred             CEEEEEcCcch-HHHHHHHHHHHCCCEEEEe-eCChhHHHHHHHHHHh----cCCcEEEEEecCCCHHHHHHHHHHHHHH
Q 024994            1 MTALVTGGTRG-IGHATVEELARFGAIVHTC-SRNQIELDARLHEWKN----KGFKVTGSVCDLSSREQREKLIETVTSI   74 (259)
Q Consensus         1 k~~lItG~s~g-iG~~~a~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~   74 (259)
                      |++|||||++| ||+++|++|+++|++|+++ +|+.+.+++..+++..    .+.++.++++|++|.++++++++++.+.
T Consensus       477 KvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I~e~  556 (1688)
T 2pff_A          477 KYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYDT  556 (1688)
T ss_dssp             CCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHHHSC
T ss_pred             CEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence            68999999998 9999999999999999998 6777766666666532    2457899999999999999999999987


Q ss_pred             -----cCC-CccEEEEcCCCCCCC-CCCCCC--HHHHHHHHHHhhHhHHHHHHHH--HHHhHhCCCCEEEEecCCCccCC
Q 024994           75 -----FQG-KLNILINNAAIAFVK-PTVDIT--AEDMSTVSSTNFESVFHLSQLA--HPLFKASGNGSIVFISSVGGVRG  143 (259)
Q Consensus        75 -----~~~-~id~vi~~ag~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~~~~~~--~~~~~~~~~~~ii~isS~~~~~~  143 (259)
                           + + ++|+||||||+...+ ++.+.+  .++|++++++|+.+++.+++.+  .|.|.+++.++||++||..+..+
T Consensus       557 ~~~~Gf-G~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG~~G  635 (1688)
T 2pff_A          557 EKNGGL-GWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG  635 (1688)
T ss_dssp             TTSSSC-CCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTTTSS
T ss_pred             cccccc-CCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHhccC
Confidence                 6 5 899999999998776 788888  9999999999999999999998  78887776689999999998877


Q ss_pred             CCCChhhhhhHHHHHHH-HHHHHHHHccCCceEEEEeCCcee-CCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHH
Q 024994          144 IPSVSLYGAYKGAMNQL-TKNLACEWAKDNIRTNTVAPWVIK-TSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSS  221 (259)
Q Consensus       144 ~~~~~~Y~~sK~a~~~~-~~~~a~e~~~~gi~v~~v~pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~  221 (259)
                        +...|++||+++++| ++.++.++++. |+||+|+||+++ |++.....  .     ........+. +..+|+|+++
T Consensus       636 --g~saYaASKAAL~aLttrsLAeEla~~-IRVNaVaPG~V~TT~M~~~~e--~-----~~~~l~~ipl-R~~sPEEVA~  704 (1688)
T 2pff_A          636 --GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSANN--I-----IAEGIEKMGV-RTFSQKEMAF  704 (1688)
T ss_dssp             --CBTTHHHHHHHHTHHHHHTTTSSCTTT-EECCCCCCCCCCCCSSSCTTT--T-----CSTTTSSSSC-CCCCCCTTHH
T ss_pred             --CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEECcCcCCcccCCch--H-----HHHHHHhCCC-CCCCHHHHHH
Confidence              678999999999999 88888888877 999999999999 78764310  0     0111223344 5568999999


Q ss_pred             HHHHHhCCC-CCCccccEEEeC--CCceeee
Q 024994          222 LVAFLCLPA-ASYITGQIICVD--GGVTVTV  249 (259)
Q Consensus       222 ~~~~l~~~~-~~~~~G~~l~~d--gG~~~~~  249 (259)
                      +++||+++. ..+++|+.+.+|  ||.....
T Consensus       705 aIlFLaSd~sAs~ITGq~I~VDVDGG~~~~~  735 (1688)
T 2pff_A          705 NLLGLLTPEVVELCQKSPVMADLNGGLQFVP  735 (1688)
T ss_dssp             HHHHHTSTTHHHHHTTSCCCCCCSCSGGGSS
T ss_pred             HHHHHhCCCccccccCcEEEEEcCCCeeecC
Confidence            999999987 689999999876  9976543

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=100.00  E-value=1.9e-33  Score=253.37  Aligned_cols=216  Identities=20%  Similarity=0.180  Sum_probs=180.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCE-EEEe-eCC-------------hhHHHHHHHHHHhcCCcEEEEEecCCCHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAI-VHTC-SRN-------------QIELDARLHEWKNKGFKVTGSVCDLSSREQRE   65 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~-V~~~-~r~-------------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~   65 (259)
                      |++|||||++|||.+++++|+++|++ |+++ +|+             .+.+++..+++...+.++.++.+|++|.++++
T Consensus       252 ~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~  331 (525)
T 3qp9_A          252 GTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEAAA  331 (525)
T ss_dssp             SEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHHHH
T ss_pred             CEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHHHH
Confidence            68999999999999999999999997 7777 898             35566777777777889999999999999999


Q ss_pred             HHHHHHHHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccCCC
Q 024994           66 KLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGI  144 (259)
Q Consensus        66 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~~~  144 (259)
                      ++++++. .+ +++|+||||||+...+++.+.+.++|++++++|+.+++++.+.+.+.+.+++ .++||++||.++..+.
T Consensus       332 ~~~~~i~-~~-g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g~  409 (525)
T 3qp9_A          332 RLLAGVS-DA-HPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWGG  409 (525)
T ss_dssp             HHHHTSC-TT-SCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTCC
T ss_pred             HHHHHHH-hc-CCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCCC
Confidence            9999988 56 6899999999998888899999999999999999999999999999998765 6899999999999999


Q ss_pred             CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHH
Q 024994          145 PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVA  224 (259)
Q Consensus       145 ~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~  224 (259)
                      ++...|+++|+++++|+    .++.++||++++|+||+++|+|....    .   ....+. .. .-+..+|+++++++.
T Consensus       410 ~g~~~YaaaKa~l~~lA----~~~~~~gi~v~sI~pG~~~tgm~~~~----~---~~~~~~-~~-g~~~l~pee~a~~l~  476 (525)
T 3qp9_A          410 AGQGAYAAGTAFLDALA----GQHRADGPTVTSVAWSPWEGSRVTEG----A---TGERLR-RL-GLRPLAPATALTALD  476 (525)
T ss_dssp             TTCHHHHHHHHHHHHHH----TSCCSSCCEEEEEEECCBTTSGGGSS----H---HHHHHH-HT-TBCCBCHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHH----HHHHhCCCCEEEEECCccccccccch----h---hHHHHH-hc-CCCCCCHHHHHHHHH
Confidence            99999999999999875    45667899999999999999887421    1   112221 11 124568999999999


Q ss_pred             HHhCCCC
Q 024994          225 FLCLPAA  231 (259)
Q Consensus       225 ~l~~~~~  231 (259)
                      ++++...
T Consensus       477 ~~l~~~~  483 (525)
T 3qp9_A          477 TALGHGD  483 (525)
T ss_dssp             HHHHHTC
T ss_pred             HHHhCCC
Confidence            9997553

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.97  E-value=1.2e-30  Score=232.99  Aligned_cols=213  Identities=23%  Similarity=0.241  Sum_probs=174.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCCh---hHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQ---IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ   76 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (259)
                      |++|||||++|||++++++|+++|+ +|++++|+.   +..+++.+++...+.++.++.+|++|.++++++++++.+.  
T Consensus       240 ~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~--  317 (496)
T 3mje_A          240 GSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED--  317 (496)
T ss_dssp             SEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT--
T ss_pred             CEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh--
Confidence            6899999999999999999999999 899999974   3466777778777889999999999999999999987654  


Q ss_pred             CCccEEEEcCCCC-CCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHH
Q 024994           77 GKLNILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKG  155 (259)
Q Consensus        77 ~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~  155 (259)
                      +++|+||||||+. ...++.+.+.++|++++++|+.+++++.+.+.    ....++||++||.++..+.+++..|+++|+
T Consensus       318 g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~----~~~~~~iV~~SS~a~~~g~~g~~~YaAaKa  393 (496)
T 3mje_A          318 APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTA----DLDLDAFVLFSSGAAVWGSGGQPGYAAANA  393 (496)
T ss_dssp             SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHT----TSCCSEEEEEEEHHHHTTCTTCHHHHHHHH
T ss_pred             CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhh----ccCCCEEEEEeChHhcCCCCCcHHHHHHHH
Confidence            4899999999997 67788999999999999999999999988874    445689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCC
Q 024994          156 AMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAA  231 (259)
Q Consensus       156 a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  231 (259)
                      ++++|++.+    .+.||++++|+||++.++.+.....  .    .+.+.. .. -...+|++.++.+.+++....
T Consensus       394 ~ldala~~~----~~~Gi~v~sV~pG~w~~~gm~~~~~--~----~~~l~~-~g-~~~l~pe~~~~~l~~~l~~~~  457 (496)
T 3mje_A          394 YLDALAEHR----RSLGLTASSVAWGTWGEVGMATDPE--V----HDRLVR-QG-VLAMEPEHALGALDQMLENDD  457 (496)
T ss_dssp             HHHHHHHHH----HHTTCCCEEEEECEESSSCC------------CHHHHH-TT-EEEECHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHH----HhcCCeEEEEECCcccCCccccChH--H----HHHHHh-cC-CCCCCHHHHHHHHHHHHcCCC
Confidence            999888755    4569999999999997765532211  1    111111 11 123479999999998886543

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.97  E-value=2.2e-31  Score=272.71  Aligned_cols=235  Identities=19%  Similarity=0.198  Sum_probs=178.9

Q ss_pred             CEEEEEcCcch-HHHHHHHHHHHCCCEEEEeeCChhH-----HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH-
Q 024994            1 MTALVTGGTRG-IGHATVEELARFGAIVHTCSRNQIE-----LDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTS-   73 (259)
Q Consensus         1 k~~lItG~s~g-iG~~~a~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-   73 (259)
                      |++|||||++| ||+++|+.|+++|++|++++|+.+.     ++++.+++...+.++..+++|++|.++++++++++.+ 
T Consensus      2137 KvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i~~~ 2216 (3089)
T 3zen_D         2137 EVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWVGTE 2216 (3089)
T ss_dssp             CEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHTSC
T ss_pred             CEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHHHhh
Confidence            79999999999 9999999999999999999998776     5566666655567889999999999999999999988 


Q ss_pred             ---HcCCCccEEEEcCCC----CC-CCCCCCCCHHH----HHHHHHHhhHhHHHHHHHHHHHhHhCCCC----EEEEecC
Q 024994           74 ---IFQGKLNILINNAAI----AF-VKPTVDITAED----MSTVSSTNFESVFHLSQLAHPLFKASGNG----SIVFISS  137 (259)
Q Consensus        74 ---~~~~~id~vi~~ag~----~~-~~~~~~~~~~~----~~~~~~~n~~~~~~~~~~~~~~~~~~~~~----~ii~isS  137 (259)
                         .+ |++|+||||||+    .. .....+.+.++    ++..+++|+.+++.+++.+.|.|...+.+    .++..++
T Consensus      2217 ~~~~f-G~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~~ss 2295 (3089)
T 3zen_D         2217 QTESL-GPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLPGSP 2295 (3089)
T ss_dssp             CEEEE-SSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEEECS
T ss_pred             hhhhc-CCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEECCc
Confidence               78 799999999997    21 12223333333    45559999999999999999999876432    2333343


Q ss_pred             CCccCCCCCChhhhhhHHHHHHHHHHHHHH--HccCCceEEEEeCCcee-CCCCCCCcCCCCchHHHHhhhhcCCCCCCC
Q 024994          138 VGGVRGIPSVSLYGAYKGAMNQLTKNLACE--WAKDNIRTNTVAPWVIK-TSMIKPFEEGPEGSEFLDGIARQTPIGRAG  214 (259)
Q Consensus       138 ~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e--~~~~gi~v~~v~pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (259)
                      ..+..  ++...|++||+|+.+|+|+++.|  +++ +|+||+++||++. |++....   ..   . .......+. +..
T Consensus      2296 ~~g~~--g~~~aYsASKaAl~~LtrslA~E~~~a~-~IrVn~v~PG~v~tT~l~~~~---~~---~-~~~~~~~~~-r~~ 2364 (3089)
T 3zen_D         2296 NRGMF--GGDGAYGEAKSALDALENRWSAEKSWAE-RVSLAHALIGWTKGTGLMGQN---DA---I-VSAVEEAGV-TTY 2364 (3089)
T ss_dssp             STTSC--SSCSSHHHHGGGHHHHHHHHHHCSTTTT-TEEEEEEECCCEECSTTTTTT---TT---T-HHHHGGGSC-BCE
T ss_pred             ccccC--CCchHHHHHHHHHHHHHHHHHhccccCC-CeEEEEEeecccCCCcccccc---hh---H-HHHHHhcCC-CCC
Confidence            33322  34568999999999999999999  665 6999999999998 6654321   11   1 112223333 444


Q ss_pred             CHHHHHHHHHHHhCCCCCCc-cccEEEeC--CCcee
Q 024994          215 EPDEVSSLVAFLCLPAASYI-TGQIICVD--GGVTV  247 (259)
Q Consensus       215 ~~~~va~~~~~l~~~~~~~~-~G~~l~~d--gG~~~  247 (259)
                      +|+|||.+++||++++++++ +|+.+.+|  ||..-
T Consensus      2365 ~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~ 2400 (3089)
T 3zen_D         2365 TTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGD 2400 (3089)
T ss_dssp             EHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSS
T ss_pred             CHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCc
Confidence            89999999999999886544 55655555  98754

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.97  E-value=1.9e-30  Score=243.85  Aligned_cols=223  Identities=20%  Similarity=0.206  Sum_probs=178.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHH-HCCC-EEEEeeCC---hhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Q 024994            1 MTALVTGGTRGIGHATVEELA-RFGA-IVHTCSRN---QIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIF   75 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~-~~G~-~V~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (259)
                      |++|||||++|||+++|++|+ ++|+ +|++++|+   .+..++..+++...+.++.++.||++|.++++++++++.+.+
T Consensus       531 ~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~~~  610 (795)
T 3slk_A          531 GTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPDEH  610 (795)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTS
T ss_pred             cceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Confidence            689999999999999999999 7999 59999998   455677888888888899999999999999999999987654


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHH
Q 024994           76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKG  155 (259)
Q Consensus        76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~  155 (259)
                        ++|+||||||+....++.+++.++|++++++|+.|++++.+++.|.|      +||++||.++..+.+++..|+++|+
T Consensus       611 --~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l------~iV~~SS~ag~~g~~g~~~YaAaka  682 (795)
T 3slk_A          611 --PLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV------ALVLFSSVSGVLGSGGQGNYAAANS  682 (795)
T ss_dssp             --CEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS------EEEEEEETHHHHTCSSCHHHHHHHH
T ss_pred             --CCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC------EEEEEccHHhcCCCCCCHHHHHHHH
Confidence              89999999999988889999999999999999999999999987666      8999999999999999999999995


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcc
Q 024994          156 AMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT  235 (259)
Q Consensus       156 a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~  235 (259)
                          |+++|+.++.++||++|+|+||++.|+++.....    +...+. .....+. ..++++....+...+......+.
T Consensus       683 ----~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~~~~~----~~~~~~-~~~~g~~-~l~~~e~~~~~~~~l~~~~~~~~  752 (795)
T 3slk_A          683 ----FLDALAQQRQSRGLPTRSLAWGPWAEHGMASTLR----EAEQDR-LARSGLL-PISTEEGLSQFDAACGGAHTVVA  752 (795)
T ss_dssp             ----HHHHHHHHHHHTTCCEEEEEECCCSCCCHHHHHH----HHHHHH-HHHTTBC-CCCHHHHHHHHHHHHTSSCSSCC
T ss_pred             ----HHHHHHHHHHHcCCeEEEEECCeECcchhhcccc----HHHHHH-HHhcCCC-CCCHHHHHHHHHHHHhCCCcEEE
Confidence                6667777777889999999999999886532110    001111 2223333 34567776666666654444444


Q ss_pred             ccEEEe
Q 024994          236 GQIICV  241 (259)
Q Consensus       236 G~~l~~  241 (259)
                      ...++.
T Consensus       753 ~~~~d~  758 (795)
T 3slk_A          753 PVRFSR  758 (795)
T ss_dssp             CCCBCC
T ss_pred             EEecCH
Confidence            333333

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.96  E-value=1.2e-28  Score=220.47  Aligned_cols=212  Identities=23%  Similarity=0.211  Sum_probs=171.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChh---HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQI---ELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ   76 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (259)
                      |++|||||+||||.+++++|+++|+ +|++++|+..   ..+++.+++...+.++.++.+|++|.++++++++++ +.+ 
T Consensus       227 ~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i-~~~-  304 (486)
T 2fr1_A          227 GTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI-GDD-  304 (486)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS-CTT-
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH-Hhc-
Confidence            6899999999999999999999999 4999999875   456666777777778999999999999999999988 555 


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHH
Q 024994           77 GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGA  156 (259)
Q Consensus        77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  156 (259)
                      +++|+||||||+...+++.+.+.+++++++++|+.+++++.+++    ...+.++||++||.++..+.++...|+++|++
T Consensus       305 g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~----~~~~~~~~V~~SS~a~~~g~~g~~~Yaaaka~  380 (486)
T 2fr1_A          305 VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELT----RELDLTAFVLFSSFASAFGAPGLGGYAPGNAY  380 (486)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHH----TTSCCSEEEEEEEHHHHTCCTTCTTTHHHHHH
T ss_pred             CCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHh----CcCCCCEEEEEcChHhcCCCCCCHHHHHHHHH
Confidence            68999999999988778888999999999999999999999887    34457899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCC
Q 024994          157 MNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAA  231 (259)
Q Consensus       157 ~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  231 (259)
                      ++.|++.+    ...|+++++|+||++.++.+...   .    ....+..  ..-...+++++++++..++....
T Consensus       381 l~~la~~~----~~~gi~v~~i~pG~~~~~gm~~~---~----~~~~~~~--~g~~~i~~e~~a~~l~~~l~~~~  442 (486)
T 2fr1_A          381 LDGLAQQR----RSDGLPATAVAWGTWAGSGMAEG---P----VADRFRR--HGVIEMPPETACRALQNALDRAE  442 (486)
T ss_dssp             HHHHHHHH----HHTTCCCEEEEECCBC-------------------CTT--TTEECBCHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHH----HhcCCeEEEEECCeeCCCcccch---h----HHHHHHh--cCCCCCCHHHHHHHHHHHHhCCC
Confidence            99887654    34699999999999987632111   0    0011100  11135689999999999886543

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.96  E-value=5.8e-29  Score=202.68  Aligned_cols=199  Identities=18%  Similarity=0.127  Sum_probs=158.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcE-EEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKV-TGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||+|+||++++++|+++|++|++++|+.++.+.+..      .++ .++.+|++         +.+.+.+ +++
T Consensus        22 ~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~------~~~~~~~~~Dl~---------~~~~~~~-~~~   85 (236)
T 3e8x_A           22 MRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE------RGASDIVVANLE---------EDFSHAF-ASI   85 (236)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH------TTCSEEEECCTT---------SCCGGGG-TTC
T ss_pred             CeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh------CCCceEEEcccH---------HHHHHHH-cCC
Confidence            689999999999999999999999999999999988765432      257 88999998         2333445 589


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCC---CCChhhhhhHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI---PSVSLYGAYKGA  156 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~---~~~~~Y~~sK~a  156 (259)
                      |+||||||....        +++++.+++|+.++..+++++    .+.+.++||++||.++..+.   ++...|+.+|++
T Consensus        86 D~vi~~ag~~~~--------~~~~~~~~~n~~~~~~l~~a~----~~~~~~~iv~~SS~~~~~~~~~~~~~~~Y~~sK~~  153 (236)
T 3e8x_A           86 DAVVFAAGSGPH--------TGADKTILIDLWGAIKTIQEA----EKRGIKRFIMVSSVGTVDPDQGPMNMRHYLVAKRL  153 (236)
T ss_dssp             SEEEECCCCCTT--------SCHHHHHHTTTHHHHHHHHHH----HHHTCCEEEEECCTTCSCGGGSCGGGHHHHHHHHH
T ss_pred             CEEEECCCCCCC--------CCccccchhhHHHHHHHHHHH----HHcCCCEEEEEecCCCCCCCCChhhhhhHHHHHHH
Confidence            999999997532        457889999999999999988    44456899999998776664   467899999999


Q ss_pred             HHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccc
Q 024994          157 MNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG  236 (259)
Q Consensus       157 ~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G  236 (259)
                      ++.+++       ..|++++.++||++.++........         .........+.+++|++++++++++...  .+|
T Consensus       154 ~e~~~~-------~~gi~~~~lrpg~v~~~~~~~~~~~---------~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~g  215 (236)
T 3e8x_A          154 ADDELK-------RSSLDYTIVRPGPLSNEESTGKVTV---------SPHFSEITRSITRHDVAKVIAELVDQQH--TIG  215 (236)
T ss_dssp             HHHHHH-------HSSSEEEEEEECSEECSCCCSEEEE---------ESSCSCCCCCEEHHHHHHHHHHHTTCGG--GTT
T ss_pred             HHHHHH-------HCCCCEEEEeCCcccCCCCCCeEEe---------ccCCCcccCcEeHHHHHHHHHHHhcCcc--ccC
Confidence            998876       4589999999999999865332110         0011123557789999999999997543  789


Q ss_pred             cEEEeCCCc
Q 024994          237 QIICVDGGV  245 (259)
Q Consensus       237 ~~l~~dgG~  245 (259)
                      +++++++|.
T Consensus       216 ~~~~v~~~~  224 (236)
T 3e8x_A          216 KTFEVLNGD  224 (236)
T ss_dssp             EEEEEEECS
T ss_pred             CeEEEeCCC
Confidence            999998883

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.96  E-value=5.1e-28  Score=207.45  Aligned_cols=227  Identities=15%  Similarity=0.077  Sum_probs=169.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCCh-hHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ-IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||+|+||++++++|+++|++|++++|+. .........+.. ..++.++.+|++|.++++++++..      ++
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~Dl~d~~~~~~~~~~~------~~   74 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS-LGNFEFVHGDIRNKNDVTRLITKY------MP   74 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT-TCCCEEEECCTTCHHHHHHHHHHH------CC
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc-CCceEEEEcCCCCHHHHHHHHhcc------CC
Confidence            6899999999999999999999999999999853 222233334433 236888999999999998888752      69


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccC-----------------
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR-----------------  142 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~-----------------  142 (259)
                      |+|||+|+....    +.+.+++++.+++|+.++..+++++.+.+.   .++||++||.+.+.                 
T Consensus        75 d~vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~---~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~  147 (347)
T 1orr_A           75 DSCFHLAGQVAM----TTSIDNPCMDFEINVGGTLNLLEAVRQYNS---NCNIIYSSTNKVYGDLEQYKYNETETRYTCV  147 (347)
T ss_dssp             SEEEECCCCCCH----HHHHHCHHHHHHHHHHHHHHHHHHHHHHCT---TCEEEEEEEGGGGTTCTTSCEEECSSCEEET
T ss_pred             CEEEECCcccCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHhCC---CceEEEeccHHHhCCCCcCCccccccccccc
Confidence            999999996432    123457788999999999999999976542   26999999976432                 


Q ss_pred             ----------CCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcC----
Q 024994          143 ----------GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQT----  208 (259)
Q Consensus       143 ----------~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~----  208 (259)
                                +..+...|+.+|++.+.+++.++.++   |++++.++||+++++.............+........    
T Consensus       148 ~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (347)
T 1orr_A          148 DKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGIN  224 (347)
T ss_dssp             TCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCC
T ss_pred             ccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCC
Confidence                      22356789999999999999999887   8999999999999997643211111111222222211    


Q ss_pred             -CCC---------CCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCc
Q 024994          209 -PIG---------RAGEPDEVSSLVAFLCLPAASYITGQIICVDGGV  245 (259)
Q Consensus       209 -~~~---------~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~  245 (259)
                       +..         .+.+++|+++++++++.. ....+|+++++++|.
T Consensus       225 ~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~-~~~~~g~~~~v~~~~  270 (347)
T 1orr_A          225 KPFTISGNGKQVRDVLHAEDMISLYFTALAN-VSKIRGNAFNIGGTI  270 (347)
T ss_dssp             CCEEEESSSCCEEECEEHHHHHHHHHHHHHT-HHHHTTCEEEESSCG
T ss_pred             CCeEEecCCcceEeeEEHHHHHHHHHHHHhc-cccCCCCEEEeCCCC
Confidence             222         155799999999998863 245689999999996

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.96  E-value=8.8e-28  Score=215.70  Aligned_cols=207  Identities=23%  Similarity=0.232  Sum_probs=171.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChh---HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQI---ELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ   76 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (259)
                      |++|||||+||||.+++++|+++|+ +|++++|+..   ..++..+++...+.++.++.+|++|.+++++++++      
T Consensus       260 ~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~------  333 (511)
T 2z5l_A          260 GTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA------  333 (511)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH------
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc------
Confidence            6899999999999999999999999 6999999874   45666777777777899999999999999998876      


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHH
Q 024994           77 GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGA  156 (259)
Q Consensus        77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  156 (259)
                      +++|+||||||+....++.+.+.+++++++++|+.+++++.+.+.+.   .+.++||++||..+..+.++...|+++|++
T Consensus       334 ~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~---~~~~~~V~~SS~a~~~g~~g~~~YaaaKa~  410 (511)
T 2z5l_A          334 YPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADI---KGLDAFVLFSSVTGTWGNAGQGAYAAANAA  410 (511)
T ss_dssp             SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC---TTCCCEEEEEEGGGTTCCTTBHHHHHHHHH
T ss_pred             CCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhc---cCCCEEEEEeCHHhcCCCCCCHHHHHHHHH
Confidence            48999999999988788888999999999999999999998876321   146899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCceEEEEeCCce-eCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 024994          157 MNQLTKNLACEWAKDNIRTNTVAPWVI-KTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPA  230 (259)
Q Consensus       157 ~~~~~~~~a~e~~~~gi~v~~v~pg~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  230 (259)
                      ++.|++.+    ...|+++++|+||++ +|+|....        ....+..  ..-...+++++++.+...+...
T Consensus       411 ld~la~~~----~~~gi~v~sv~pG~~~~tgm~~~~--------~~~~~~~--~g~~~l~~e~~a~~l~~al~~~  471 (511)
T 2z5l_A          411 LDALAERR----RAAGLPATSVAWGLWGGGGMAAGA--------GEESLSR--RGLRAMDPDAAVDALLGAMGRN  471 (511)
T ss_dssp             HHHHHHHH----HTTTCCCEEEEECCBCSTTCCCCH--------HHHHHHH--HTBCCBCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHH----HHcCCcEEEEECCcccCCcccccc--------cHHHHHh--cCCCCCCHHHHHHHHHHHHhCC
Confidence            99998865    356999999999998 77765431        1111111  1113568999999999888643

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.96  E-value=1.8e-28  Score=203.60  Aligned_cols=194  Identities=18%  Similarity=0.201  Sum_probs=156.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+||||++++++|+++|++|++++|+..+.+         +.++.++.+|++|.++++++++        ++|
T Consensus         4 k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~--------~~D   66 (267)
T 3rft_A            4 KRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA---------GPNEECVQCDLADANAVNAMVA--------GCD   66 (267)
T ss_dssp             EEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC---------CTTEEEEECCTTCHHHHHHHHT--------TCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc---------CCCCEEEEcCCCCHHHHHHHHc--------CCC
Confidence            58999999999999999999999999999999875543         4478999999999999988874        699


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCcc------------CCCCCCh
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV------------RGIPSVS  148 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~------------~~~~~~~  148 (259)
                      +||||||..        +.++|++++++|+.+++.+++++    .+.+.++||++||..++            .+.++..
T Consensus        67 ~vi~~Ag~~--------~~~~~~~~~~~N~~g~~~l~~a~----~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~  134 (267)
T 3rft_A           67 GIVHLGGIS--------VEKPFEQILQGNIIGLYNLYEAA----RAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPDG  134 (267)
T ss_dssp             EEEECCSCC--------SCCCHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCS
T ss_pred             EEEECCCCc--------CcCCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCC
Confidence            999999973        23457889999999999999998    44567899999998776            3445668


Q ss_pred             hhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhC
Q 024994          149 LYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCL  228 (259)
Q Consensus       149 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  228 (259)
                      .|+.||++++.+++.++.++   |++++.|+||.+.++.....        ...         .+.+++|+++.+..++.
T Consensus       135 ~Y~~sK~~~e~~~~~~a~~~---g~~~~~vr~~~v~~~~~~~~--------~~~---------~~~~~~d~a~~~~~~~~  194 (267)
T 3rft_A          135 LYGVSKCFGENLARMYFDKF---GQETALVRIGSCTPEPNNYR--------MLS---------TWFSHDDFVSLIEAVFR  194 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH---CCCEEEEEECBCSSSCCSTT--------HHH---------HBCCHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHh---CCeEEEEEeecccCCCCCCC--------cee---------eEEcHHHHHHHHHHHHh
Confidence            99999999999999999887   89999999999988754211        111         13468999999988886


Q ss_pred             CCCCCccccEEEeCCCc
Q 024994          229 PAASYITGQIICVDGGV  245 (259)
Q Consensus       229 ~~~~~~~G~~l~~dgG~  245 (259)
                      ...  ..+.++.+.++.
T Consensus       195 ~~~--~~~~~~~~~s~~  209 (267)
T 3rft_A          195 APV--LGCPVVWGASAN  209 (267)
T ss_dssp             CSC--CCSCEEEECCCC
T ss_pred             CCC--CCceEEEEeCCC
Confidence            432  334455555544

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.96  E-value=9.2e-28  Score=205.58  Aligned_cols=233  Identities=15%  Similarity=0.075  Sum_probs=171.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||+|+||++++++|+++|++|++++|+.+......+++... +.++.++.+|++|.+++++++++      .++
T Consensus         6 ~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~------~~~   79 (341)
T 3enk_A            6 GTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA------HPI   79 (341)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH------SCC
T ss_pred             cEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc------cCC
Confidence            68999999999999999999999999999999876655554444332 45788999999999999998875      479


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCcc-----------CCCCCCh
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV-----------RGIPSVS  148 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~-----------~~~~~~~  148 (259)
                      |+||||||......    ..+..++.+++|+.++..+++++    .+.+.++||++||.+.+           .+..+..
T Consensus        80 d~vih~A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~  151 (341)
T 3enk_A           80 TAAIHFAALKAVGE----SVAKPIEYYRNNLDSLLSLLRVM----RERAVKRIVFSSSATVYGVPERSPIDETFPLSATN  151 (341)
T ss_dssp             CEEEECCCCCCHHH----HHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBCSS
T ss_pred             cEEEECccccccCc----cccChHHHHHHHHHHHHHHHHHH----HhCCCCEEEEEecceEecCCCCCCCCCCCCCCCCC
Confidence            99999999754321    23445678889999999987766    55666899999997654           2223457


Q ss_pred             hhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCC------C-chHHHHhhhhc-CCC----------
Q 024994          149 LYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGP------E-GSEFLDGIARQ-TPI----------  210 (259)
Q Consensus       149 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~------~-~~~~~~~~~~~-~~~----------  210 (259)
                      .|+.||++.+.+++.++.++.  +++++.++|+.++++.........      . ........... .++          
T Consensus       152 ~Y~~sK~~~e~~~~~~~~~~~--~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  229 (341)
T 3enk_A          152 PYGQTKLMAEQILRDVEAADP--SWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTP  229 (341)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCT--TCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSST
T ss_pred             hhHHHHHHHHHHHHHHhhcCC--CceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCC
Confidence            899999999999999988862  599999999999998653221110      0 01111111111 111          


Q ss_pred             -----CCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          211 -----GRAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       211 -----~~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                           ..+..++|+++++++++........|+++++++|..+++
T Consensus       230 ~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~  273 (341)
T 3enk_A          230 DGTGVRDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGYSV  273 (341)
T ss_dssp             TSSCEECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCEEH
T ss_pred             CCCeeEeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCceeH
Confidence                 124568999999998886422235789999999987664

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.95  E-value=1.2e-27  Score=203.29  Aligned_cols=217  Identities=18%  Similarity=0.127  Sum_probs=168.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+|+||++++++|+++|++|++++|+... +.    +     ++.++.+|++|.++++++++.      +++|
T Consensus        13 ~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l-----~~~~~~~Dl~d~~~~~~~~~~------~~~d   76 (321)
T 2pk3_A           13 MRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P-----NVEMISLDIMDSQRVKKVISD------IKPD   76 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T-----TEEEEECCTTCHHHHHHHHHH------HCCS
T ss_pred             ceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c-----eeeEEECCCCCHHHHHHHHHh------cCCC
Confidence            689999999999999999999999999999998765 21    1     678899999999999888875      2699


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCC-------------CCCC
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-------------IPSV  147 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~-------------~~~~  147 (259)
                      +|||+||.....    .+.+++++.+++|+.++..+++++ +.+  .+.++||++||...+.+             .++.
T Consensus        77 ~vih~A~~~~~~----~~~~~~~~~~~~Nv~g~~~l~~a~-~~~--~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~  149 (321)
T 2pk3_A           77 YIFHLAAKSSVK----DSWLNKKGTFSTNVFGTLHVLDAV-RDS--NLDCRILTIGSSEEYGMILPEESPVSEENQLRPM  149 (321)
T ss_dssp             EEEECCSCCCHH----HHTTCHHHHHHHHHHHHHHHHHHH-HHH--TCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCC
T ss_pred             EEEEcCcccchh----hhhhcHHHHHHHHHHHHHHHHHHH-HHh--CCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCCC
Confidence            999999975321    122357889999999999999998 444  24689999999865432             2456


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhh---c-----------CCCCCC
Q 024994          148 SLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIAR---Q-----------TPIGRA  213 (259)
Q Consensus       148 ~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~---~-----------~~~~~~  213 (259)
                      ..|+.+|++.+.+++.++.++   |++++.++|+++.++......   ....+......   .           .+...+
T Consensus       150 ~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  223 (321)
T 2pk3_A          150 SPYGVSKASVGMLARQYVKAY---GMDIIHTRTFNHIGPGQSLGF---VTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDF  223 (321)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCTTS---HHHHHHHHHHHHHTTSSCSEEEESCSSCEEEE
T ss_pred             CccHHHHHHHHHHHHHHHHHc---CCCEEEEEeCcccCcCCCCCc---hHHHHHHHHHHHhcCCCCCeEEeCCCCcEEee
Confidence            789999999999999998876   899999999999999764310   01112222222   1           112235


Q ss_pred             CCHHHHHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          214 GEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       214 ~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      .+++|++++++++++..   .+|+++++++|..+++
T Consensus       224 v~v~Dva~a~~~~~~~~---~~g~~~~i~~~~~~s~  256 (321)
T 2pk3_A          224 TDVRDIVQAYWLLSQYG---KTGDVYNVCSGIGTRI  256 (321)
T ss_dssp             EEHHHHHHHHHHHHHHC---CTTCEEEESCSCEEEH
T ss_pred             EEHHHHHHHHHHHHhCC---CCCCeEEeCCCCCeeH
Confidence            67999999999998643   4789999999987664

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.95  E-value=1.9e-26  Score=185.90  Aligned_cols=191  Identities=9%  Similarity=0.024  Sum_probs=146.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHH-HCCCEEEEeeCChh-HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELA-RFGAIVHTCSRNQI-ELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~-~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||+|+||++++++|+ ++|++|++++|+.+ +++++.    ....++.++++|++|.++++++++        +
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~D~~d~~~~~~~~~--------~   73 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----IDHERVTVIEGSFQNPGXLEQAVT--------N   73 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----HTSTTEEEEECCTTCHHHHHHHHT--------T
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----cCCCceEEEECCCCCHHHHHHHHc--------C
Confidence            579999999999999999999 89999999999987 655432    235579999999999999888774        6


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCCh----------
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVS----------  148 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~----------  148 (259)
                      +|+||||||..                   |+.     ++.+++.|.+.+.++||++||..++.+.+...          
T Consensus        74 ~d~vv~~ag~~-------------------n~~-----~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~  129 (221)
T 3r6d_A           74 AEVVFVGAMES-------------------GSD-----MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNLPI  129 (221)
T ss_dssp             CSEEEESCCCC-------------------HHH-----HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHTSCH
T ss_pred             CCEEEEcCCCC-------------------Chh-----HHHHHHHHHhcCCCeEEEEeeceecCCCCccccccccccccc
Confidence            89999999953                   222     67778888888778999999998877655443          


Q ss_pred             hhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCC-CCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHh
Q 024994          149 LYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM-IKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLC  227 (259)
Q Consensus       149 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  227 (259)
                      .|+.+|.+++.+++.       .|++++.|+||++.++. ........         ......++..+++|+|+++++++
T Consensus       130 ~y~~~K~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~~~~~---------~~~~~~~~~~~~~dvA~~~~~l~  193 (221)
T 3r6d_A          130 SYVQGERQARNVLRE-------SNLNYTILRLTWLYNDPEXTDYELIP---------EGAQFNDAQVSREAVVKAIFDIL  193 (221)
T ss_dssp             HHHHHHHHHHHHHHH-------SCSEEEEEEECEEECCTTCCCCEEEC---------TTSCCCCCEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHh-------CCCCEEEEechhhcCCCCCcceeecc---------CCccCCCceeeHHHHHHHHHHHH
Confidence            899999999987753       58999999999998883 22221110         01122234678999999999999


Q ss_pred             --CCCCCCccccEEEeCCC
Q 024994          228 --LPAASYITGQIICVDGG  244 (259)
Q Consensus       228 --~~~~~~~~G~~l~~dgG  244 (259)
                        ++.+.++++ .+.+++.
T Consensus       194 ~~~~~~~~~~~-~~~i~~~  211 (221)
T 3r6d_A          194 HAADETPFHRT-SIGVGEP  211 (221)
T ss_dssp             TCSCCGGGTTE-EEEEECT
T ss_pred             HhcChhhhhcc-eeeecCC
Confidence              877666655 4555443

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.95  E-value=1.2e-27  Score=206.29  Aligned_cols=228  Identities=16%  Similarity=0.139  Sum_probs=171.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHC-CCEEEEeeCChh--HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024994            1 MTALVTGGTRGIGHATVEELARF-GAIVHTCSRNQI--ELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG   77 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~-G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (259)
                      |++|||||+|+||++++++|+++ |++|++++|+..  ..+.+ .++.. ..++.++.+|++|.+++.+++++.      
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~------   72 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDISE-SNRYNFEHADICDSAEITRIFEQY------   72 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTTT-CTTEEEEECCTTCHHHHHHHHHHH------
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhhc-CCCeEEEECCCCCHHHHHHHHhhc------
Confidence            67999999999999999999998 799999998652  22221 11111 347889999999999998888652      


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-----CCEEEEecCCCccC----------
Q 024994           78 KLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-----NGSIVFISSVGGVR----------  142 (259)
Q Consensus        78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~~~ii~isS~~~~~----------  142 (259)
                      ++|+|||+||....    +.+.+++++++++|+.++..+++++.+.|...+     .++||++||.+.+-          
T Consensus        73 ~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~  148 (361)
T 1kew_A           73 QPDAVMHLAAESHV----DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVEN  148 (361)
T ss_dssp             CCSEEEECCSCCCH----HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCT
T ss_pred             CCCEEEECCCCcCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccc
Confidence            79999999997531    123466788999999999999999988875421     35999999965321          


Q ss_pred             -----------CCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCC--
Q 024994          143 -----------GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTP--  209 (259)
Q Consensus       143 -----------~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~--  209 (259)
                                 +.++...|+.||++.+.+++.++.++   |++++.++|+.++++.....   .....+........+  
T Consensus       149 ~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~~vrp~~v~G~~~~~~---~~~~~~~~~~~~~~~~~  222 (361)
T 1kew_A          149 SVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPE---KLIPLVILNALEGKPLP  222 (361)
T ss_dssp             TSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTT---SHHHHHHHHHHHTCCEE
T ss_pred             cccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCcEEEEeeceeECCCCCcc---cHHHHHHHHHHcCCCce
Confidence                       23456789999999999999999887   89999999999999975321   111112233322221  


Q ss_pred             -------CCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          210 -------IGRAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       210 -------~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                             ...+..++|++++++++++..   .+|+++++++|..+++
T Consensus       223 ~~~~~~~~~~~i~v~Dva~a~~~~~~~~---~~g~~~~v~~~~~~s~  266 (361)
T 1kew_A          223 IYGKGDQIRDWLYVEDHARALHMVVTEG---KAGETYNIGGHNEKKN  266 (361)
T ss_dssp             EETTSCCEEEEEEHHHHHHHHHHHHHHC---CTTCEEEECCCCEEEH
T ss_pred             EcCCCceeEeeEEHHHHHHHHHHHHhCC---CCCCEEEecCCCeeeH
Confidence                   123567999999999998643   4799999999987654

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.95  E-value=4.9e-26  Score=195.87  Aligned_cols=229  Identities=13%  Similarity=0.076  Sum_probs=170.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChh----HHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHHHc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI----ELDARLHEWKNK-GFKVTGSVCDLSSREQREKLIETVTSIF   75 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (259)
                      |++|||||+|+||++++++|+++|++|++++|+..    .++.+.+++... ..++.++.+|++|.++++++++      
T Consensus        28 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------  101 (352)
T 1sb8_A           28 KVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA------  101 (352)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT------
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc------
Confidence            68999999999999999999999999999999753    233322222110 2478899999999988877764      


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCC----------
Q 024994           76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIP----------  145 (259)
Q Consensus        76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~----------  145 (259)
                        ++|+|||+|+.....    .+.+++++.+++|+.++..+++++.    +.+.++||++||...+.+.+          
T Consensus       102 --~~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~~v~~SS~~~~~~~~~~~~~E~~~~  171 (352)
T 1sb8_A          102 --GVDYVLHQAALGSVP----RSINDPITSNATNIDGFLNMLIAAR----DAKVQSFTYAASSSTYGDHPGLPKVEDTIG  171 (352)
T ss_dssp             --TCSEEEECCSCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHH----HTTCSEEEEEEEGGGGTTCCCSSBCTTCCC
T ss_pred             --CCCEEEECCcccCch----hhhhCHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEeccHHhcCCCCCCCCCCCCCC
Confidence              699999999974321    1346788899999999999999884    34568999999987654332          


Q ss_pred             -CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCC-CCchHHHHhhhhcCCC---------CCCC
Q 024994          146 -SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEG-PEGSEFLDGIARQTPI---------GRAG  214 (259)
Q Consensus       146 -~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~---------~~~~  214 (259)
                       +...|+.+|++.+.+++.++.++   |++++.++||.+.++........ .....+........+.         ..+.
T Consensus       172 ~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i  248 (352)
T 1sb8_A          172 KPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFC  248 (352)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCE
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeE
Confidence             45789999999999999998886   89999999999999875432100 1111233333333322         1356


Q ss_pred             CHHHHHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          215 EPDEVSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       215 ~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      .++|+++++++++... ....|+++++++|..+++
T Consensus       249 ~v~Dva~a~~~~~~~~-~~~~~~~~ni~~~~~~s~  282 (352)
T 1sb8_A          249 YIENTVQANLLAATAG-LDARNQVYNIAVGGRTSL  282 (352)
T ss_dssp             EHHHHHHHHHHHHTCC-GGGCSEEEEESCSCCEEH
T ss_pred             EHHHHHHHHHHHHhcc-ccCCCceEEeCCCCCccH
Confidence            7999999998888642 346789999999977654

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.95  E-value=1.2e-26  Score=198.32  Aligned_cols=223  Identities=16%  Similarity=0.133  Sum_probs=166.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhc-CCcEEEE-EecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGS-VCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~-~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||+|+||++++++|+++|++|++++|+.++.+.+.+.+... +.++.++ .+|++|.+++++++        .+
T Consensus        12 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~--------~~   83 (342)
T 1y1p_A           12 SLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVI--------KG   83 (342)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTT--------TT
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHH--------cC
Confidence            68999999999999999999999999999999988776555444322 3478888 79999988776655        36


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccC-CC-------------
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR-GI-------------  144 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~-~~-------------  144 (259)
                      +|+|||+|+.....       +++++.+++|+.++..+++++.+   ..+.++||++||..++. +.             
T Consensus        84 ~d~vih~A~~~~~~-------~~~~~~~~~n~~g~~~ll~~~~~---~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~  153 (342)
T 1y1p_A           84 AAGVAHIASVVSFS-------NKYDEVVTPAIGGTLNALRAAAA---TPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSW  153 (342)
T ss_dssp             CSEEEECCCCCSCC-------SCHHHHHHHHHHHHHHHHHHHHT---CTTCCEEEEECCGGGTCCCCTTCCCCEECTTCC
T ss_pred             CCEEEEeCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHh---CCCCcEEEEeccHHHhcCCCCCCCCcccCcccc
Confidence            99999999975432       24567899999999999998843   23458999999987652 21             


Q ss_pred             -----------------CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhc
Q 024994          145 -----------------PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQ  207 (259)
Q Consensus       145 -----------------~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~  207 (259)
                                       .+...|+.||++.+.+++.++.++.+ +++++.++|++++++.............+...+...
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~  232 (342)
T 1y1p_A          154 NLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-HFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNG  232 (342)
T ss_dssp             CHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-SSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTT
T ss_pred             CchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCC-CceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcC
Confidence                             12367999999999999999999866 899999999999999865422110111122222221


Q ss_pred             C--------CCCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCC
Q 024994          208 T--------PIGRAGEPDEVSSLVAFLCLPAASYITGQIICVDGG  244 (259)
Q Consensus       208 ~--------~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG  244 (259)
                      .        +...+.+++|+++++++++..  ...+|+.+..+|+
T Consensus       233 ~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~--~~~~g~~~~~~g~  275 (342)
T 1y1p_A          233 EVSPALALMPPQYYVSAVDIGLLHLGCLVL--PQIERRRVYGTAG  275 (342)
T ss_dssp             CCCHHHHTCCSEEEEEHHHHHHHHHHHHHC--TTCCSCEEEECCE
T ss_pred             CCccccccCCcCCEeEHHHHHHHHHHHHcC--cccCCceEEEeCC
Confidence            1        233467899999999988864  3457876666654

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.95  E-value=5.5e-27  Score=188.86  Aligned_cols=193  Identities=13%  Similarity=0.168  Sum_probs=157.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS-REQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||+|+||++++++|+++|++|++++|+.++.+..        .++.++++|++| .+++.+++        .++
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--------~~~~~~~~D~~d~~~~~~~~~--------~~~   64 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY--------NNVKAVHFDVDWTPEEMAKQL--------HGM   64 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC--------TTEEEEECCTTSCHHHHHTTT--------TTC
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc--------CCceEEEecccCCHHHHHHHH--------cCC
Confidence            6899999999999999999999999999999998765432        478999999999 88877766        369


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCC-------Chhhhh
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPS-------VSLYGA  152 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~-------~~~Y~~  152 (259)
                      |+||||||....            +.+++|+.++..+++++    ++.+.++||++||..+..+.+.       ...|+.
T Consensus        65 d~vi~~ag~~~~------------~~~~~n~~~~~~l~~a~----~~~~~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~  128 (219)
T 3dqp_A           65 DAIINVSGSGGK------------SLLKVDLYGAVKLMQAA----EKAEVKRFILLSTIFSLQPEKWIGAGFDALKDYYI  128 (219)
T ss_dssp             SEEEECCCCTTS------------SCCCCCCHHHHHHHHHH----HHTTCCEEEEECCTTTTCGGGCCSHHHHHTHHHHH
T ss_pred             CEEEECCcCCCC------------CcEeEeHHHHHHHHHHH----HHhCCCEEEEECcccccCCCcccccccccccHHHH
Confidence            999999997642            15678999999998887    5556689999999888776665       789999


Q ss_pred             hHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCC
Q 024994          153 YKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAAS  232 (259)
Q Consensus       153 sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  232 (259)
                      +|++.+.+++      ...|++++.++||++.++.......            .......+.+++|+++++++++...  
T Consensus       129 sK~~~e~~~~------~~~~i~~~ilrp~~v~g~~~~~~~~------------~~~~~~~~i~~~Dva~~i~~~l~~~--  188 (219)
T 3dqp_A          129 AKHFADLYLT------KETNLDYTIIQPGALTEEEATGLID------------INDEVSASNTIGDVADTIKELVMTD--  188 (219)
T ss_dssp             HHHHHHHHHH------HSCCCEEEEEEECSEECSCCCSEEE------------ESSSCCCCEEHHHHHHHHHHHHTCG--
T ss_pred             HHHHHHHHHH------hccCCcEEEEeCceEecCCCCCccc------------cCCCcCCcccHHHHHHHHHHHHhCc--
Confidence            9999998886      3569999999999999885432211            1134456778999999999999754  


Q ss_pred             CccccEEEeCCCc
Q 024994          233 YITGQIICVDGGV  245 (259)
Q Consensus       233 ~~~G~~l~~dgG~  245 (259)
                      ...|+++++++|.
T Consensus       189 ~~~g~~~~i~~g~  201 (219)
T 3dqp_A          189 HSIGKVISMHNGK  201 (219)
T ss_dssp             GGTTEEEEEEECS
T ss_pred             cccCcEEEeCCCC
Confidence            3569999997764

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.94  E-value=2e-26  Score=197.95  Aligned_cols=215  Identities=18%  Similarity=0.115  Sum_probs=168.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHC-CC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARF-GA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~-G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||+|+||++++++|+++ |+ +|++++|+..+.....+++.  ..++.++.+|++|.+++.++++        +
T Consensus        22 k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~--------~   91 (344)
T 2gn4_A           22 QTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN--DPRMRFFIGDVRDLERLNYALE--------G   91 (344)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC--CTTEEEEECCTTCHHHHHHHTT--------T
T ss_pred             CEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc--CCCEEEEECCCCCHHHHHHHHh--------c
Confidence            68999999999999999999999 98 99999999888776665553  3578999999999988877763        6


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      +|+|||+||.....    ....+.++.+++|+.++.++++++.+    .+.++||++||..+..|   ...|+.||++++
T Consensus        92 ~D~Vih~Aa~~~~~----~~~~~~~~~~~~Nv~gt~~l~~aa~~----~~v~~~V~~SS~~~~~p---~~~Y~~sK~~~E  160 (344)
T 2gn4_A           92 VDICIHAAALKHVP----IAEYNPLECIKTNIMGASNVINACLK----NAISQVIALSTDKAANP---INLYGATKLCSD  160 (344)
T ss_dssp             CSEEEECCCCCCHH----HHHHSHHHHHHHHHHHHHHHHHHHHH----TTCSEEEEECCGGGSSC---CSHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCC----chhcCHHHHHHHHHHHHHHHHHHHHh----CCCCEEEEecCCccCCC---ccHHHHHHHHHH
Confidence            99999999975321    12234568899999999999999854    45689999999776543   578999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcC-C--------CCCCCCHHHHHHHHHHHhCC
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQT-P--------IGRAGEPDEVSSLVAFLCLP  229 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-~--------~~~~~~~~~va~~~~~l~~~  229 (259)
                      .++++++.++.+.|+++++++||++.++....      .+.+...+.... +        ...+.+++|+++++++++..
T Consensus       161 ~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~~------i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~~~l~~  234 (344)
T 2gn4_A          161 KLFVSANNFKGSSQTQFSVVRYGNVVGSRGSV------VPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKR  234 (344)
T ss_dssp             HHHHHGGGCCCSSCCEEEEECCCEETTCTTSH------HHHHHHHHHHTCCCEEESCTTCEEEEECHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCcEEEEEEeccEECCCCCH------HHHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHHHHHHHhh
Confidence            99999988887789999999999999875321      111223222221 1        11256899999999998864


Q ss_pred             CCCCccccEEEeCCCc
Q 024994          230 AASYITGQIICVDGGV  245 (259)
Q Consensus       230 ~~~~~~G~~l~~dgG~  245 (259)
                      .   ..|++++++++.
T Consensus       235 ~---~~g~~~~~~~~~  247 (344)
T 2gn4_A          235 M---HGGEIFVPKIPS  247 (344)
T ss_dssp             C---CSSCEEEECCCE
T ss_pred             c---cCCCEEecCCCc
Confidence            3   368899988763

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.94  E-value=5.4e-27  Score=198.49  Aligned_cols=221  Identities=22%  Similarity=0.186  Sum_probs=163.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+|+||++++++|+++|++|++++|.......      ....++.++.+|++|.+++++++++.      ++|
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~------~~~~~~~~~~~Dl~~~~~~~~~~~~~------~~d   68 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE------NVPKGVPFFRVDLRDKEGVERAFREF------RPT   68 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG------GSCTTCCEECCCTTCHHHHHHHHHHH------CCS
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh------hcccCeEEEECCCCCHHHHHHHHHhc------CCC
Confidence            689999999999999999999999999999985432111      11135678899999999998887642      689


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCC-------------CCCC
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-------------IPSV  147 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~-------------~~~~  147 (259)
                      +|||+|+....    ..+.+++++.+++|+.+++.+++++    .+.+.++||++||.++.++             ..+.
T Consensus        69 ~vi~~a~~~~~----~~~~~~~~~~~~~N~~g~~~l~~a~----~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~  140 (311)
T 2p5y_A           69 HVSHQAAQASV----KVSVEDPVLDFEVNLLGGLNLLEAC----RQYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPK  140 (311)
T ss_dssp             EEEECCSCCCH----HHHHHCHHHHHHHHTHHHHHHHHHH----HHTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCC
T ss_pred             EEEECccccCc----hhhhhCHHHHHHHHHHHHHHHHHHH----HHhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCC
Confidence            99999996432    1235667889999999999999988    3445679999999722211             1245


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCC--------------CCCC
Q 024994          148 SLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTP--------------IGRA  213 (259)
Q Consensus       148 ~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~  213 (259)
                      ..|+.||++++.+++.++.++   |++++.++|+.+++|.............+........+              ...+
T Consensus       141 ~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  217 (311)
T 2p5y_A          141 SPYAASKAAFEHYLSVYGQSY---GLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDY  217 (311)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECE
T ss_pred             ChHHHHHHHHHHHHHHHHHHc---CCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEee
Confidence            789999999999999998876   89999999999999975432110001112222222222              1234


Q ss_pred             CCHHHHHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          214 GEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       214 ~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      ..++|+++++++++...     |+.+++++|..+++
T Consensus       218 i~v~Dva~a~~~~~~~~-----~~~~~i~~~~~~s~  248 (311)
T 2p5y_A          218 VYVGDVAEAHALALFSL-----EGIYNVGTGEGHTT  248 (311)
T ss_dssp             EEHHHHHHHHHHHHHHC-----CEEEEESCSCCEEH
T ss_pred             EEHHHHHHHHHHHHhCC-----CCEEEeCCCCCccH
Confidence            57899999999888642     88999999987654

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.94  E-value=1.7e-27  Score=194.50  Aligned_cols=194  Identities=16%  Similarity=0.171  Sum_probs=149.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC--EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||+|+||++++++|+++|+  +|++++|+.++.+...      ..++.++.+|++|.+++++++        .+
T Consensus        19 ~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~------~~~~~~~~~D~~d~~~~~~~~--------~~   84 (242)
T 2bka_A           19 KSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA------YKNVNQEVVDFEKLDDYASAF--------QG   84 (242)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG------GGGCEEEECCGGGGGGGGGGG--------SS
T ss_pred             CeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc------cCCceEEecCcCCHHHHHHHh--------cC
Confidence            6899999999999999999999999  9999999876543211      125788899999988877655        37


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      +|+||||||....       .+++++.+++|+.++..+++++    .+.+.++||++||.+++.  ++...|+.+|++++
T Consensus        85 ~d~vi~~ag~~~~-------~~~~~~~~~~n~~~~~~~~~~~----~~~~~~~iv~~SS~~~~~--~~~~~Y~~sK~~~e  151 (242)
T 2bka_A           85 HDVGFCCLGTTRG-------KAGAEGFVRVDRDYVLKSAELA----KAGGCKHFNLLSSKGADK--SSNFLYLQVKGEVE  151 (242)
T ss_dssp             CSEEEECCCCCHH-------HHHHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEECCTTCCT--TCSSHHHHHHHHHH
T ss_pred             CCEEEECCCcccc-------cCCcccceeeeHHHHHHHHHHH----HHCCCCEEEEEccCcCCC--CCcchHHHHHHHHH
Confidence            9999999996421       2457889999999999988876    455568999999988764  34568999999999


Q ss_pred             HHHHHHHHHHccCCc-eEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCC----CCCCCCHHHHHHHHHHHhCCCCC
Q 024994          159 QLTKNLACEWAKDNI-RTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTP----IGRAGEPDEVSSLVAFLCLPAAS  232 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi-~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~va~~~~~l~~~~~~  232 (259)
                      .+++.+       ++ +++.++||+++|+.....    .............|    .+++.+++|+++++++++++...
T Consensus       152 ~~~~~~-------~~~~~~~vrpg~v~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~  219 (242)
T 2bka_A          152 AKVEEL-------KFDRYSVFRPGVLLCDRQESR----PGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPRD  219 (242)
T ss_dssp             HHHHTT-------CCSEEEEEECCEEECTTGGGS----HHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCCC
T ss_pred             HHHHhc-------CCCCeEEEcCceecCCCCCCc----HHHHHHHHhhcccCccccCCcccCHHHHHHHHHHHHhCccc
Confidence            988764       56 799999999999975321    01112222222334    45678999999999999986543

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.94  E-value=8e-27  Score=199.33  Aligned_cols=223  Identities=15%  Similarity=0.065  Sum_probs=166.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCC--CEEEEeeCChh--HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024994            1 MTALVTGGTRGIGHATVEELARFG--AIVHTCSRNQI--ELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ   76 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G--~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (259)
                      |++|||||+|+||++++++|+++|  ++|++++|+..  ..+.+ .++.. ..++.++.+|++|.+++++++        
T Consensus         4 m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~~~-~~~~~~~~~Dl~d~~~~~~~~--------   73 (336)
T 2hun_A            4 MKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDLED-DPRYTFVKGDVADYELVKELV--------   73 (336)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTTTT-CTTEEEEECCTTCHHHHHHHH--------
T ss_pred             CeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhhcc-CCceEEEEcCCCCHHHHHHHh--------
Confidence            579999999999999999999997  89999998642  11111 11111 347889999999999888877        


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccC-----------CCC
Q 024994           77 GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR-----------GIP  145 (259)
Q Consensus        77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~-----------~~~  145 (259)
                      +++|+|||+||....    +.+.+++++.+++|+.++..+++++.+.   ...++||++||...+-           +.+
T Consensus        74 ~~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~  146 (336)
T 2hun_A           74 RKVDGVVHLAAESHV----DRSISSPEIFLHSNVIGTYTLLESIRRE---NPEVRFVHVSTDEVYGDILKGSFTENDRLM  146 (336)
T ss_dssp             HTCSEEEECCCCCCH----HHHHHCTHHHHHHHHHHHHHHHHHHHHH---CTTSEEEEEEEGGGGCCCSSSCBCTTBCCC
T ss_pred             hCCCEEEECCCCcCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHh---CCCcEEEEeccHHHHCCCCCCCcCCCCCCC
Confidence            269999999997531    1234567889999999999999999765   2247999999975431           334


Q ss_pred             CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCC---------CCCCCCH
Q 024994          146 SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTP---------IGRAGEP  216 (259)
Q Consensus       146 ~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~  216 (259)
                      +...|+.||++.+.+++.++.++   |++++.++|+.++++.....   ..............+         ...+..+
T Consensus       147 ~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  220 (336)
T 2hun_A          147 PSSPYSATKAASDMLVLGWTRTY---NLNASITRCTNNYGPYQFPE---KLIPKTIIRASLGLKIPIYGTGKNVRDWLYV  220 (336)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHT---TCEEEEEEECEEESTTCCTT---SHHHHHHHHHHTTCCEEEETC---CEEEEEH
T ss_pred             CCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeeeeeCcCCCcC---chHHHHHHHHHcCCCceEeCCCCceeeeEEH
Confidence            56789999999999999998876   89999999999999975321   111112223322221         1235678


Q ss_pred             HHHHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          217 DEVSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       217 ~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      +|++++++++++..   .+|+++++++|..++.
T Consensus       221 ~Dva~~~~~~~~~~---~~g~~~~v~~~~~~s~  250 (336)
T 2hun_A          221 EDHVRAIELVLLKG---ESREIYNISAGEEKTN  250 (336)
T ss_dssp             HHHHHHHHHHHHHC---CTTCEEEECCSCEECH
T ss_pred             HHHHHHHHHHHhCC---CCCCEEEeCCCCcccH
Confidence            99999999988643   4799999999987654

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.94  E-value=2.5e-26  Score=188.25  Aligned_cols=212  Identities=12%  Similarity=0.042  Sum_probs=156.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHC--CCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARF--GAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||+|+||++++++|+++  |++|++++|+.++.+..       ..++.++.+|++|.++++++++        +
T Consensus         5 ~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~D~~d~~~~~~~~~--------~   69 (253)
T 1xq6_A            5 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-------GGEADVFIGDITDADSINPAFQ--------G   69 (253)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-------TCCTTEEECCTTSHHHHHHHHT--------T
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-------CCCeeEEEecCCCHHHHHHHHc--------C
Confidence            68999999999999999999999  89999999998765432       3356788999999998888763        6


Q ss_pred             ccEEEEcCCCCCCCCC---------CCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChh
Q 024994           79 LNILINNAAIAFVKPT---------VDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSL  149 (259)
Q Consensus        79 id~vi~~ag~~~~~~~---------~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~  149 (259)
                      +|+||||||.......         .+...+++++.+++|+.++..+++++.    +.+.++||++||..+..+.++...
T Consensus        70 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~  145 (253)
T 1xq6_A           70 IDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAK----VAGVKHIVVVGSMGGTNPDHPLNK  145 (253)
T ss_dssp             CSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHH----HHTCSEEEEEEETTTTCTTCGGGG
T ss_pred             CCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHH----HcCCCEEEEEcCccCCCCCCcccc
Confidence            8999999997642211         122234455678899999999988873    444689999999887665444444


Q ss_pred             -----hhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHH
Q 024994          150 -----YGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVA  224 (259)
Q Consensus       150 -----Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~  224 (259)
                           |+.+|++++.+++.       .|++++.++||++.++..........   .......  ...++.+++|++++++
T Consensus       146 ~~~~~y~~sK~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~~~~~---~~~~~~~--~~~~~~~~~Dva~~~~  213 (253)
T 1xq6_A          146 LGNGNILVWKRKAEQYLAD-------SGTPYTIIRAGGLLDKEGGVRELLVG---KDDELLQ--TDTKTVPRADVAEVCI  213 (253)
T ss_dssp             GGGCCHHHHHHHHHHHHHT-------SSSCEEEEEECEEECSCSSSSCEEEE---STTGGGG--SSCCEEEHHHHHHHHH
T ss_pred             ccchhHHHHHHHHHHHHHh-------CCCceEEEecceeecCCcchhhhhcc---CCcCCcC--CCCcEEcHHHHHHHHH
Confidence                 55699999987753       58999999999999986532110000   0001111  1235678999999999


Q ss_pred             HHhCCCCCCccccEEEeCCCc
Q 024994          225 FLCLPAASYITGQIICVDGGV  245 (259)
Q Consensus       225 ~l~~~~~~~~~G~~l~~dgG~  245 (259)
                      +++...  ...|++++++++.
T Consensus       214 ~~~~~~--~~~g~~~~i~~~~  232 (253)
T 1xq6_A          214 QALLFE--EAKNKAFDLGSKP  232 (253)
T ss_dssp             HHTTCG--GGTTEEEEEEECC
T ss_pred             HHHcCc--cccCCEEEecCCC
Confidence            999653  3578999999863

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.94  E-value=3.3e-25  Score=190.49  Aligned_cols=229  Identities=17%  Similarity=0.117  Sum_probs=172.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcC-----CcEEEEEecCCCHHHHHHHHHHHHHHc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG-----FKVTGSVCDLSSREQREKLIETVTSIF   75 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (259)
                      |++|||||+|+||++++++|+++|++|++++|+..........+....     .++.++.+|++|.+++.++++      
T Consensus        26 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   99 (351)
T 3ruf_A           26 KTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK------   99 (351)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT------
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc------
Confidence            689999999999999999999999999999997654444344443221     478999999999988877763      


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCC-----------
Q 024994           76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI-----------  144 (259)
Q Consensus        76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~-----------  144 (259)
                        ++|+|||+|+....    ..+.++++..+++|+.++..+++++    .+.+.+++|++||...+...           
T Consensus       100 --~~d~Vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~  169 (351)
T 3ruf_A          100 --GVDHVLHQAALGSV----PRSIVDPITTNATNITGFLNILHAA----KNAQVQSFTYAASSSTYGDHPALPKVEENIG  169 (351)
T ss_dssp             --TCSEEEECCCCCCH----HHHHHCHHHHHHHHTHHHHHHHHHH----HHTTCSEEEEEEEGGGGTTCCCSSBCTTCCC
T ss_pred             --CCCEEEECCccCCc----chhhhCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEecHHhcCCCCCCCCccCCCC
Confidence              69999999996432    1234567788999999999999988    45556799999998665322           


Q ss_pred             CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCC-CCchHHHHhhhhcCCCC---------CCC
Q 024994          145 PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEG-PEGSEFLDGIARQTPIG---------RAG  214 (259)
Q Consensus       145 ~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~---------~~~  214 (259)
                      .+...|+.+|.+.+.+++.++.++   |++++.++|+.++++........ .....+........+..         .+.
T Consensus       170 ~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i  246 (351)
T 3ruf_A          170 NPLSPYAVTKYVNEIYAQVYARTY---GFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFC  246 (351)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCE
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeE
Confidence            235789999999999999998887   89999999999999875432111 11122333333333321         245


Q ss_pred             CHHHHHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          215 EPDEVSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       215 ~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      .++|++++++.++... ....|+++++.+|..+++
T Consensus       247 ~v~Dva~a~~~~~~~~-~~~~~~~~ni~~~~~~s~  280 (351)
T 3ruf_A          247 YIDNVIQMNILSALAK-DSAKDNIYNVAVGDRTTL  280 (351)
T ss_dssp             EHHHHHHHHHHHHTCC-GGGCSEEEEESCSCCEEH
T ss_pred             EHHHHHHHHHHHHhhc-cccCCCEEEeCCCCcccH
Confidence            6899999999888642 356899999999987654

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.94  E-value=4.3e-26  Score=194.64  Aligned_cols=213  Identities=12%  Similarity=0.070  Sum_probs=158.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+|+||++++++|+++|++|++++|+.....+...++    .++.++.+|++|.+++++++++.      ++|
T Consensus        21 ~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l----~~v~~~~~Dl~d~~~~~~~~~~~------~~D   90 (330)
T 2pzm_A           21 MRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV----AGLSVIEGSVTDAGLLERAFDSF------KPT   90 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC----TTEEEEECCTTCHHHHHHHHHHH------CCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc----CCceEEEeeCCCHHHHHHHHhhc------CCC
Confidence            68999999999999999999999999999999754322111111    36889999999999998888754      699


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCC-----C------CChh
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI-----P------SVSL  149 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~-----~------~~~~  149 (259)
                      +||||||.....     +.++++  +++|+.++..+++++.    +.+.++||++||.+.+.+.     +      +...
T Consensus        91 ~vih~A~~~~~~-----~~~~~~--~~~N~~~~~~l~~a~~----~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~~~~~~  159 (330)
T 2pzm_A           91 HVVHSAAAYKDP-----DDWAED--AATNVQGSINVAKAAS----KAGVKRLLNFQTALCYGRPATVPIPIDSPTAPFTS  159 (330)
T ss_dssp             EEEECCCCCSCT-----TCHHHH--HHHHTHHHHHHHHHHH----HHTCSEEEEEEEGGGGCSCSSSSBCTTCCCCCCSH
T ss_pred             EEEECCccCCCc-----cccChh--HHHHHHHHHHHHHHHH----HcCCCEEEEecCHHHhCCCccCCCCcCCCCCCCCh
Confidence            999999975432     345555  8999999999999985    3346899999998765433     2      5678


Q ss_pred             hhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhc-CC-----CCCCCCHHHHHH-H
Q 024994          150 YGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQ-TP-----IGRAGEPDEVSS-L  222 (259)
Q Consensus       150 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~va~-~  222 (259)
                      |+.+|++++.+++.+       +++...++|+.+..|....    .....+...+... ..     ...+.+++|+++ +
T Consensus       160 Y~~sK~~~e~~~~~~-------~~~~~~iR~~~v~gp~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~a  228 (330)
T 2pzm_A          160 YGISKTAGEAFLMMS-------DVPVVSLRLANVTGPRLAI----GPIPTFYKRLKAGQKCFCSDTVRDFLDMSDFLAIA  228 (330)
T ss_dssp             HHHHHHHHHHHHHTC-------SSCEEEEEECEEECTTCCS----SHHHHHHHHHHTTCCCCEESCEECEEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHc-------CCCEEEEeeeeeECcCCCC----CHHHHHHHHHHcCCEEeCCCCEecceeHHHHHHHH
Confidence            999999999998876       5777888888887776310    0111112222111 11     234678999999 9


Q ss_pred             HHHHhCCCCCCccccEEEeCCCceeee
Q 024994          223 VAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       223 ~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      ++++++.. .   |+++++++|..+++
T Consensus       229 ~~~~~~~~-~---g~~~~v~~~~~~s~  251 (330)
T 2pzm_A          229 DLSLQEGR-P---TGVFNVSTGEGHSI  251 (330)
T ss_dssp             HHHTSTTC-C---CEEEEESCSCCEEH
T ss_pred             HHHHhhcC-C---CCEEEeCCCCCCCH
Confidence            99998753 2   89999999987654

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.94  E-value=8e-26  Score=194.82  Aligned_cols=228  Identities=15%  Similarity=0.072  Sum_probs=168.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+|+||++++++|+++|++|++++|+.+........+. ...++.++.+|++|.+++.++++..      ++|
T Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~------~~d   82 (357)
T 1rkx_A           10 KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR-VADGMQSEIGDIRDQNKLLESIREF------QPE   82 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT-TTTTSEEEECCTTCHHHHHHHHHHH------CCS
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc-cCCceEEEEccccCHHHHHHHHHhc------CCC
Confidence            689999999999999999999999999999998765444333332 2447889999999999998888754      699


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccC------------CCCCCh
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR------------GIPSVS  148 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~------------~~~~~~  148 (259)
                      +|||+||...    .+.+.+++++.+++|+.++..+++++.+.   ...++||++||...+-            +..+..
T Consensus        83 ~vih~A~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~~  155 (357)
T 1rkx_A           83 IVFHMAAQPL----VRLSYSEPVETYSTNVMGTVYLLEAIRHV---GGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYD  155 (357)
T ss_dssp             EEEECCSCCC----HHHHHHCHHHHHHHHTHHHHHHHHHHHHH---CCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSS
T ss_pred             EEEECCCCcc----cccchhCHHHHHHHHHHHHHHHHHHHHHh---CCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCCC
Confidence            9999999632    12245677889999999999999998542   2257999999976421            334567


Q ss_pred             hhhhhHHHHHHHHHHHHHHHc------cCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCC--------CCCC
Q 024994          149 LYGAYKGAMNQLTKNLACEWA------KDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPI--------GRAG  214 (259)
Q Consensus       149 ~Y~~sK~a~~~~~~~~a~e~~------~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~  214 (259)
                      .|+.+|.+.+.+++.++.++.      +.|++++.++||++.+|.....  ......+...+....+.        ..+.
T Consensus       156 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~v  233 (357)
T 1rkx_A          156 PYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWAL--DRIVPDILRAFEQSQPVIIRNPHAIRPWQ  233 (357)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCS--SCHHHHHHHHHHTTCCEECSCTTCEECCE
T ss_pred             ccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCcc--ccHHHHHHHHHhcCCCEEECCCCCeeccE
Confidence            899999999999999998874      4589999999999999864211  11111223332222221        1255


Q ss_pred             CHHHHHHHHHHHhCCC--CCCccccEEEeCCC
Q 024994          215 EPDEVSSLVAFLCLPA--ASYITGQIICVDGG  244 (259)
Q Consensus       215 ~~~~va~~~~~l~~~~--~~~~~G~~l~~dgG  244 (259)
                      .++|++++++.++...  .....|+++++.+|
T Consensus       234 ~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~  265 (357)
T 1rkx_A          234 HVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPN  265 (357)
T ss_dssp             ETHHHHHHHHHHHHHHHHTCGGGCSEEECCCC
T ss_pred             eHHHHHHHHHHHHHhhhhcCCCCCceEEECCC
Confidence            7899999998887521  11246789999875

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.94  E-value=1.1e-25  Score=192.61  Aligned_cols=213  Identities=12%  Similarity=0.092  Sum_probs=157.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+|+||++++++|+++|++|++++|+.++.+.+    .  ..++.++.+|++|.+++.++++        ++|
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l----~--~~~~~~~~~Dl~d~~~~~~~~~--------~~d   79 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRL----A--YLEPECRVAEMLDHAGLERALR--------GLD   79 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGG----G--GGCCEEEECCTTCHHHHHHHTT--------TCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhh----c--cCCeEEEEecCCCHHHHHHHHc--------CCC
Confidence            4799999999999999999999999999999987654322    1  1257888999999988877663        699


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCC--------------
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPS--------------  146 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~--------------  146 (259)
                      +|||+|+...      ...+++++.+++|+.++..+++++.+    .+.++||++||...+.+.+.              
T Consensus        80 ~vih~a~~~~------~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~  149 (342)
T 2x4g_A           80 GVIFSAGYYP------SRPRRWQEEVASALGQTNPFYAACLQ----ARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLP  149 (342)
T ss_dssp             EEEEC------------------CHHHHHHHHHHHHHHHHHH----HTCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCC
T ss_pred             EEEECCccCc------CCCCCHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEECCHHhhCcCCCCCCCCCCCCCCccc
Confidence            9999999642      23456788999999999999999854    34589999999877544333              


Q ss_pred             --ChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCC----CC--CCCHHH
Q 024994          147 --VSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPI----GR--AGEPDE  218 (259)
Q Consensus       147 --~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~  218 (259)
                        ...|+.+|.+.+.+++.++.   + |++++.++||.++++.....  .  .......+....+.    .+  +.+++|
T Consensus       150 ~~~~~Y~~sK~~~e~~~~~~~~---~-g~~~~ilrp~~v~g~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~i~v~D  221 (342)
T 2x4g_A          150 SGKSSYVLCKWALDEQAREQAR---N-GLPVVIGIPGMVLGELDIGP--T--TGRVITAIGNGEMTHYVAGQRNVIDAAE  221 (342)
T ss_dssp             TTSCHHHHHHHHHHHHHHHHHH---T-TCCEEEEEECEEECSCCSSC--S--TTHHHHHHHTTCCCEEECCEEEEEEHHH
T ss_pred             cccChHHHHHHHHHHHHHHHhh---c-CCcEEEEeCCceECCCCccc--c--HHHHHHHHHcCCCccccCCCcceeeHHH
Confidence              67899999999999999875   3 89999999999999876210  1  12233333333221    22  568999


Q ss_pred             HHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          219 VSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       219 va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      +++++++++....   .|+++++++|. ++.
T Consensus       222 va~~~~~~~~~~~---~g~~~~v~~~~-~s~  248 (342)
T 2x4g_A          222 AGRGLLMALERGR---IGERYLLTGHN-LEM  248 (342)
T ss_dssp             HHHHHHHHHHHSC---TTCEEEECCEE-EEH
T ss_pred             HHHHHHHHHhCCC---CCceEEEcCCc-ccH
Confidence            9999999987443   28999999997 554

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.94  E-value=1.1e-26  Score=196.56  Aligned_cols=218  Identities=18%  Similarity=0.117  Sum_probs=164.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+|+||++++++|+++|++|++++|+.+......      ...+.++.+|++|.+ +.+++        .. |
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------~~~~~~~~~Dl~d~~-~~~~~--------~~-d   64 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV------NPSAELHVRDLKDYS-WGAGI--------KG-D   64 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS------CTTSEEECCCTTSTT-TTTTC--------CC-S
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc------CCCceEEECccccHH-HHhhc--------CC-C
Confidence            78999999999999999999999999999999776533221      346888999999976 55443        23 9


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccC-----------CCCCChh
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR-----------GIPSVSL  149 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~-----------~~~~~~~  149 (259)
                      +|||+|+....    ..+.++++..+++|+.++..+++++    .+.+.++||++||...+-           +..+...
T Consensus        65 ~vih~A~~~~~----~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~  136 (312)
T 3ko8_A           65 VVFHFAANPEV----RLSTTEPIVHFNENVVATFNVLEWA----RQTGVRTVVFASSSTVYGDADVIPTPEEEPYKPISV  136 (312)
T ss_dssp             EEEECCSSCSS----SGGGSCHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSH
T ss_pred             EEEECCCCCCc----hhhhhCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCCh
Confidence            99999996432    2345567888999999999999988    444567999999976542           2335688


Q ss_pred             hhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhc-CCC---------CCCCCHHHH
Q 024994          150 YGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQ-TPI---------GRAGEPDEV  219 (259)
Q Consensus       150 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~---------~~~~~~~~v  219 (259)
                      |+.+|.+.+.+++.++.++   |++++.++|+++++|.....    ....+....... .++         ..+..++|+
T Consensus       137 Y~~sK~~~e~~~~~~~~~~---g~~~~~lrp~~v~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv  209 (312)
T 3ko8_A          137 YGAAKAAGEVMCATYARLF---GVRCLAVRYANVVGPRLRHG----VIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDA  209 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCSS----HHHHHHHHHHHCTTEEEEC----CEECEEEHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHh---CCCEEEEeeccccCcCCCCC----hHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHH
Confidence            9999999999999999887   89999999999999975421    111122322222 111         124568999


Q ss_pred             HHHHHHHhCC-CCCCccccEEEeCCCceeee
Q 024994          220 SSLVAFLCLP-AASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       220 a~~~~~l~~~-~~~~~~G~~l~~dgG~~~~~  249 (259)
                      ++++++++.. ......|+++++.+|..+++
T Consensus       210 a~a~~~~~~~~~~~~~~~~~~ni~~~~~~s~  240 (312)
T 3ko8_A          210 VEATLAAWKKFEEMDAPFLALNVGNVDAVRV  240 (312)
T ss_dssp             HHHHHHHHHHHHHSCCSEEEEEESCSSCEEH
T ss_pred             HHHHHHHHHhccccCCCCcEEEEcCCCceeH
Confidence            9999999864 11345789999999877654

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.94  E-value=1.3e-24  Score=190.15  Aligned_cols=231  Identities=15%  Similarity=0.119  Sum_probs=165.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHH----------------HHHHHH-HhcCCcEEEEEecCCCHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELD----------------ARLHEW-KNKGFKVTGSVCDLSSREQ   63 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~----------------~~~~~~-~~~~~~~~~~~~D~~~~~~   63 (259)
                      +++|||||+|+||.+++++|+++|++|++++|+.....                +...++ .....++.++.+|++|.++
T Consensus        12 ~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d~~~   91 (404)
T 1i24_A           12 SRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFEF   91 (404)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHHH
T ss_pred             CeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCCHHH
Confidence            47999999999999999999999999999998754321                111111 1124578899999999999


Q ss_pred             HHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCC-CEEEEecCCCccC
Q 024994           64 REKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGN-GSIVFISSVGGVR  142 (259)
Q Consensus        64 ~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~ii~isS~~~~~  142 (259)
                      ++++++..      ++|+|||+||....... ..++++++.++++|+.++..+++++.+.    +. .+||++||.+.+-
T Consensus        92 ~~~~~~~~------~~D~Vih~A~~~~~~~~-~~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~~~~~V~~SS~~vyg  160 (404)
T 1i24_A           92 LAESFKSF------EPDSVVHFGEQRSAPYS-MIDRSRAVYTQHNNVIGTLNVLFAIKEF----GEECHLVKLGTMGEYG  160 (404)
T ss_dssp             HHHHHHHH------CCSEEEECCSCCCHHHH-TSCHHHHHHHHHHHHHHHHHHHHHHHHH----CTTCEEEEECCGGGGC
T ss_pred             HHHHHhcc------CCCEEEECCCCCCccch-hhCccchhhhHHHHHHHHHHHHHHHHHh----CCCcEEEEeCcHHHhC
Confidence            98888754      59999999997543211 2256778889999999999999988532    33 5999999975432


Q ss_pred             ------------------------CCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCc------
Q 024994          143 ------------------------GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE------  192 (259)
Q Consensus       143 ------------------------~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~------  192 (259)
                                              +..+...|+.||++.+.+++.++.++   |++++.++||.+++|......      
T Consensus       161 ~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ivrp~~v~Gp~~~~~~~~~~~~  237 (404)
T 1i24_A          161 TPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVKTDETEMHEELR  237 (404)
T ss_dssp             CCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSCCTTGGGSGGGC
T ss_pred             CCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc---CCeEEEEecceeeCCCCCccccccccc
Confidence                                    23345789999999999999998887   899999999999998753210      


Q ss_pred             -----C---CCCchHHHHhhhhcCCC---------CCCCCHHHHHHHHHHHhCCCCCCccc--cEEEeCCCceee
Q 024994          193 -----E---GPEGSEFLDGIARQTPI---------GRAGEPDEVSSLVAFLCLPAASYITG--QIICVDGGVTVT  248 (259)
Q Consensus       193 -----~---~~~~~~~~~~~~~~~~~---------~~~~~~~~va~~~~~l~~~~~~~~~G--~~l~~dgG~~~~  248 (259)
                           .   ......+........+.         ..+..++|++++++.++....  ..|  +++++.+ ..++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~--~~g~~~~yni~~-~~~s  309 (404)
T 1i24_A          238 NRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPA--KAGEFRVFNQFT-EQFS  309 (404)
T ss_dssp             CCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCC--CTTCEEEEEECS-EEEE
T ss_pred             cccccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcc--cCCCceEEEECC-CCCc
Confidence                 0   01112233333332221         124568999999998885432  246  7899976 4443

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.94  E-value=9.9e-26  Score=193.38  Aligned_cols=225  Identities=14%  Similarity=0.053  Sum_probs=163.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCC--CEEEEeeCChhHH-HHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFG--AIVHTCSRNQIEL-DARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG   77 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G--~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (259)
                      |+||||||+|+||.+++++|+++|  ++|+..+|..... ......+ ....++.++.+|++|.+++.++++..      
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~------   97 (346)
T 4egb_A           25 MNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSI-QDHPNYYFVKGEIQNGELLEHVIKER------   97 (346)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTT-TTCTTEEEEECCTTCHHHHHHHHHHH------
T ss_pred             CeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhh-ccCCCeEEEEcCCCCHHHHHHHHhhc------
Confidence            589999999999999999999999  7888888764211 1111111 11347999999999999999988753      


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCC------------C
Q 024994           78 KLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI------------P  145 (259)
Q Consensus        78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~------------~  145 (259)
                      ++|+|||+|+.....    ...+++++.+++|+.++..+++++    .+.+.+++|++||...+...            .
T Consensus        98 ~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~v~~SS~~vy~~~~~~~~~~E~~~~~  169 (346)
T 4egb_A           98 DVQVIVNFAAESHVD----RSIENPIPFYDTNVIGTVTLLELV----KKYPHIKLVQVSTDEVYGSLGKTGRFTEETPLA  169 (346)
T ss_dssp             TCCEEEECCCCC-------------CHHHHHHTHHHHHHHHHH----HHSTTSEEEEEEEGGGGCCCCSSCCBCTTSCCC
T ss_pred             CCCEEEECCcccchh----hhhhCHHHHHHHHHHHHHHHHHHH----HhcCCCEEEEeCchHHhCCCCcCCCcCCCCCCC
Confidence            699999999976432    245667889999999999999988    45556899999997554322            2


Q ss_pred             CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCC---------CCCH
Q 024994          146 SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGR---------AGEP  216 (259)
Q Consensus       146 ~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~  216 (259)
                      +...|+.+|.+.+.+++.++.++   |++++.++|++++++.....   .....+........+...         +..+
T Consensus       170 p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  243 (346)
T 4egb_A          170 PNSPYSSSKASADMIALAYYKTY---QLPVIVTRCSNNYGPYQYPE---KLIPLMVTNALEGKKLPLYGDGLNVRDWLHV  243 (346)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTT---SHHHHHHHHHHTTCCCEEETTSCCEECEEEH
T ss_pred             CCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeecceeCcCCCcc---chHHHHHHHHHcCCCceeeCCCCeEEeeEEH
Confidence            34789999999999999998876   89999999999999875321   111223333333333221         2358


Q ss_pred             HHHHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          217 DEVSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       217 ~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      +|+++++++++....   .|+++++.+|..+++
T Consensus       244 ~Dva~a~~~~~~~~~---~g~~~~i~~~~~~s~  273 (346)
T 4egb_A          244 TDHCSAIDVVLHKGR---VGEVYNIGGNNEKTN  273 (346)
T ss_dssp             HHHHHHHHHHHHHCC---TTCEEEECCSCCEEH
T ss_pred             HHHHHHHHHHHhcCC---CCCEEEECCCCceeH
Confidence            999999999987543   889999999987654

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.94  E-value=1.1e-25  Score=192.41  Aligned_cols=223  Identities=18%  Similarity=0.150  Sum_probs=164.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHC---C---CEEEEeeCChhHH-HHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARF---G---AIVHTCSRNQIEL-DARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTS   73 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~---G---~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   73 (259)
                      |++|||||+|+||++++++|+++   |   ++|++++|+.... .....++. ...++.++.+|++|.+++++++     
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~-----   74 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVD-ADPRLRFVHGDIRDAGLLAREL-----   74 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGT-TCTTEEEEECCTTCHHHHHHHT-----
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcc-cCCCeEEEEcCCCCHHHHHHHh-----
Confidence            68999999999999999999997   8   9999999864210 01111111 1347889999999998887766     


Q ss_pred             HcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccC-----------
Q 024994           74 IFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR-----------  142 (259)
Q Consensus        74 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~-----------  142 (259)
                         .++|+|||+|+....    +.+.+++++.+++|+.++..+++++.+    .+.++||++||.+.+-           
T Consensus        75 ---~~~d~Vih~A~~~~~----~~~~~~~~~~~~~Nv~~~~~l~~a~~~----~~~~~~v~~SS~~vyg~~~~~~~~E~~  143 (337)
T 1r6d_A           75 ---RGVDAIVHFAAESHV----DRSIAGASVFTETNVQGTQTLLQCAVD----AGVGRVVHVSTNQVYGSIDSGSWTESS  143 (337)
T ss_dssp             ---TTCCEEEECCSCCCH----HHHHHCCHHHHHHHTHHHHHHHHHHHH----TTCCEEEEEEEGGGGCCCSSSCBCTTS
T ss_pred             ---cCCCEEEECCCccCc----hhhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEecchHHhCCCCCCCCCCCC
Confidence               479999999996532    123456778999999999999999854    3457999999975432           


Q ss_pred             CCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCC---------CCC
Q 024994          143 GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPI---------GRA  213 (259)
Q Consensus       143 ~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~  213 (259)
                      +..+...|+.+|++.+.+++.++.++   |++++.++|++++++.....   .....+........+.         ..+
T Consensus       144 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilrp~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (337)
T 1r6d_A          144 PLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQHPE---KLIPLFVTNLLDGGTLPLYGDGANVREW  217 (337)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTT---SHHHHHHHHHHTTCCEEEETTSCCEEEE
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHH---CCCEEEEEeeeeECCCCCCC---ChHHHHHHHHhcCCCcEEeCCCCeeEee
Confidence            23456789999999999999998876   89999999999999875321   1111122333222211         134


Q ss_pred             CCHHHHHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          214 GEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       214 ~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      ..++|+++++++++...   .+|+++++++|..+++
T Consensus       218 i~v~Dva~a~~~~~~~~---~~g~~~~v~~~~~~s~  250 (337)
T 1r6d_A          218 VHTDDHCRGIALVLAGG---RAGEIYHIGGGLELTN  250 (337)
T ss_dssp             EEHHHHHHHHHHHHHHC---CTTCEEEECCCCEEEH
T ss_pred             EeHHHHHHHHHHHHhCC---CCCCEEEeCCCCCccH
Confidence            57899999999988643   3789999999987654

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.94  E-value=1e-24  Score=190.40  Aligned_cols=172  Identities=17%  Similarity=0.141  Sum_probs=136.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHH-HCCCEEEEeeCChhH---------HHHHHHHHHhc-----CCc---EEEEEecCCCHH
Q 024994            1 MTALVTGGTRGIGHATVEELA-RFGAIVHTCSRNQIE---------LDARLHEWKNK-----GFK---VTGSVCDLSSRE   62 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~-~~G~~V~~~~r~~~~---------~~~~~~~~~~~-----~~~---~~~~~~D~~~~~   62 (259)
                      |++|||||+|+||.+++++|+ ++|++|++++|+...         .+.+.+.+...     ..+   +.++.+|++|.+
T Consensus         3 m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~   82 (397)
T 1gy8_A            3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED   82 (397)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCHH
Confidence            689999999999999999999 999999999987654         33332223322     124   889999999999


Q ss_pred             HHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccC
Q 024994           63 QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR  142 (259)
Q Consensus        63 ~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~  142 (259)
                      ++++++++    + +++|+|||+|+.....    .+.+++++.+++|+.++..+++++    .+.+.++||++||.+.+-
T Consensus        83 ~~~~~~~~----~-~~~d~vih~A~~~~~~----~~~~~~~~~~~~Nv~g~~~ll~a~----~~~~~~~iv~~SS~~v~g  149 (397)
T 1gy8_A           83 FLNGVFTR----H-GPIDAVVHMCAFLAVG----ESVRDPLKYYDNNVVGILRLLQAM----LLHKCDKIIFSSSAAIFG  149 (397)
T ss_dssp             HHHHHHHH----S-CCCCEEEECCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGTB
T ss_pred             HHHHHHHh----c-CCCCEEEECCCccCcC----cchhhHHHHHHHHhHHHHHHHHHH----HHhCCCEEEEECCHHHhC
Confidence            98887764    3 4599999999975322    134677889999999999999987    445568999999965432


Q ss_pred             CCC------------------CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCC
Q 024994          143 GIP------------------SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI  188 (259)
Q Consensus       143 ~~~------------------~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~  188 (259)
                      ...                  +...|+.||++.+.+++.++.++   |++++.++|+++.++..
T Consensus       150 ~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilRp~~v~G~~~  210 (397)
T 1gy8_A          150 NPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGAHE  210 (397)
T ss_dssp             SCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECCCT
T ss_pred             CCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH---CCcEEEEeccceeCCCc
Confidence            111                  25789999999999999999887   89999999999998864

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.93  E-value=6.3e-25  Score=174.55  Aligned_cols=197  Identities=12%  Similarity=0.053  Sum_probs=149.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+|+||++++++|+++|++|++++|+.++.+..      ...++.++.+|++|.+++.++++        .+|
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~--------~~d   69 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE------GPRPAHVVVGDVLQAADVDKTVA--------GQD   69 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS------SCCCSEEEESCTTSHHHHHHHHT--------TCS
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc------cCCceEEEEecCCCHHHHHHHHc--------CCC
Confidence            6899999999999999999999999999999998764321      13468899999999998877763        589


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCC----CChhhhhhHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIP----SVSLYGAYKGA  156 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~----~~~~Y~~sK~a  156 (259)
                      +|||++|.....   +.        .++|+.++..+++++    .+.+.+++|++||...+...+    +...|+.+|.+
T Consensus        70 ~vi~~a~~~~~~---~~--------~~~n~~~~~~~~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~y~~~K~~  134 (206)
T 1hdo_A           70 AVIVLLGTRNDL---SP--------TTVMSEGARNIVAAM----KAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIR  134 (206)
T ss_dssp             EEEECCCCTTCC---SC--------CCHHHHHHHHHHHHH----HHHTCCEEEEECCGGGTSCTTCSCGGGHHHHHHHHH
T ss_pred             EEEECccCCCCC---Cc--------cchHHHHHHHHHHHH----HHhCCCeEEEEeeeeeccCcccccccchhHHHHHHH
Confidence            999999975431   11        137888888888777    344567999999987654443    56789999999


Q ss_pred             HHHHHHHHHHHHccCCceEEEEeCCce-eCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcc
Q 024994          157 MNQLTKNLACEWAKDNIRTNTVAPWVI-KTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT  235 (259)
Q Consensus       157 ~~~~~~~~a~e~~~~gi~v~~v~pg~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~  235 (259)
                      ++.+++.       .+++++.++||++ .++....+..         .+ ...|.+.+.+++|+++++.+++...  ..+
T Consensus       135 ~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~~~~---------~~-~~~~~~~~i~~~Dva~~~~~~~~~~--~~~  195 (206)
T 1hdo_A          135 MHKVLRE-------SGLKYVAVMPPHIGDQPLTGAYTV---------TL-DGRGPSRVISKHDLGHFMLRCLTTD--EYD  195 (206)
T ss_dssp             HHHHHHH-------TCSEEEEECCSEEECCCCCSCCEE---------ES-SSCSSCSEEEHHHHHHHHHHTTSCS--TTT
T ss_pred             HHHHHHh-------CCCCEEEEeCCcccCCCCCcceEe---------cc-cCCCCCCccCHHHHHHHHHHHhcCc--ccc
Confidence            9988742       4899999999998 3433221111         00 1122246778999999999999753  378


Q ss_pred             ccEEEeCCCc
Q 024994          236 GQIICVDGGV  245 (259)
Q Consensus       236 G~~l~~dgG~  245 (259)
                      |++++++||+
T Consensus       196 g~~~~i~~g~  205 (206)
T 1hdo_A          196 GHSTYPSHQY  205 (206)
T ss_dssp             TCEEEEECCC
T ss_pred             ccceeeeccc
Confidence            9999999985

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.93  E-value=4.6e-25  Score=189.29  Aligned_cols=233  Identities=16%  Similarity=0.109  Sum_probs=163.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhH------HHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE------LDARLHEWKN-KGFKVTGSVCDLSSREQREKLIETVTS   73 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~------~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~   73 (259)
                      |++|||||+|+||.+++++|+++|++|++++|+...      ..+..+++.. .+.++.++.+|++|.+++++++++   
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~---   79 (348)
T 1ek6_A            3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK---   79 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH---
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHh---
Confidence            689999999999999999999999999999885432      1122222222 244688899999999998888764   


Q ss_pred             HcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCC----------
Q 024994           74 IFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG----------  143 (259)
Q Consensus        74 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~----------  143 (259)
                         .++|+|||+||......    +.+++++.+++|+.++..+++++    .+.+.++||++||...+..          
T Consensus        80 ---~~~d~vih~A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~SS~~~~g~~~~~~~~E~~  148 (348)
T 1ek6_A           80 ---YSFMAVIHFAGLKAVGE----SVQKPLDYYRVNLTGTIQLLEIM----KAHGVKNLVFSSSATVYGNPQYLPLDEAH  148 (348)
T ss_dssp             ---CCEEEEEECCSCCCHHH----HHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGGCSCSSSSBCTTS
T ss_pred             ---cCCCEEEECCCCcCccc----hhhchHHHHHHHHHHHHHHHHHH----HHhCCCEEEEECcHHHhCCCCCCCcCCCC
Confidence               26999999999753221    34567889999999999999876    4555689999999765421          


Q ss_pred             -C-CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcC-C-----CC-chHHHHhhh-hcCC----
Q 024994          144 -I-PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE-G-----PE-GSEFLDGIA-RQTP----  209 (259)
Q Consensus       144 -~-~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~-~-----~~-~~~~~~~~~-~~~~----  209 (259)
                       . |....|+.+|++.+.+++.++.+  ..+++++.++|+.+.++....... .     .. ......... ...+    
T Consensus       149 ~~~p~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (348)
T 1ek6_A          149 PTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVF  226 (348)
T ss_dssp             CCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEE
T ss_pred             CCCCCCCchHHHHHHHHHHHHHHHhc--CCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEe
Confidence             1 22678999999999999999877  236999999999999884311110 0     01 111122222 1111    


Q ss_pred             -----------CCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          210 -----------IGRAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       210 -----------~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                                 ...+..++|++++++.++........++++++.+|..+++
T Consensus       227 g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s~  277 (348)
T 1ek6_A          227 GNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSV  277 (348)
T ss_dssp             CSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEH
T ss_pred             CCcccCCCCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCccH
Confidence                       1124578999999988885321122248999998876654

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.93  E-value=7.9e-26  Score=194.06  Aligned_cols=221  Identities=17%  Similarity=0.088  Sum_probs=164.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHC--CCEEEEeeCChhH-HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024994            1 MTALVTGGTRGIGHATVEELARF--GAIVHTCSRNQIE-LDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG   77 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~--G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (259)
                      |++|||||+|+||.+++++|+++  |++|++++|+... ......++  ...++.++.+|++|.++++++++        
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~--------   74 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI--LGDRVELVVGDIADAELVDKLAA--------   74 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG--CSSSEEEEECCTTCHHHHHHHHT--------
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhh--ccCCeEEEECCCCCHHHHHHHhh--------
Confidence            58999999999999999999999  8999999996521 11111111  12478899999999988887764        


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccC---------------
Q 024994           78 KLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR---------------  142 (259)
Q Consensus        78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~---------------  142 (259)
                      .+|+|||+||....    +.+.+++++.+++|+.++..+++++.+.    + .+||++||...+-               
T Consensus        75 ~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~-~~~v~~SS~~vyg~~~~~~~~~~~~~~~  145 (348)
T 1oc2_A           75 KADAIVHYAAESHN----DNSLNDPSPFIHTNFIGTYTLLEAARKY----D-IRFHHVSTDEVYGDLPLREDLPGHGEGP  145 (348)
T ss_dssp             TCSEEEECCSCCCH----HHHHHCCHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGGGGCCBCCGGGSTTTTCST
T ss_pred             cCCEEEECCcccCc----cchhhCHHHHHHHHHHHHHHHHHHHHHh----C-CeEEEecccceeCCCccccccccccccc
Confidence            57999999997532    1234567789999999999999998654    3 4999999975331               


Q ss_pred             --------CCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCC-----
Q 024994          143 --------GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTP-----  209 (259)
Q Consensus       143 --------~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-----  209 (259)
                              +.++...|+.+|++.+.+++.++.++   |++++.++|+.++++.....   .....+........+     
T Consensus       146 ~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~~  219 (348)
T 1oc2_A          146 GEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQHIE---KFIPRQITNILAGIKPKLYG  219 (348)
T ss_dssp             TSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCCTT---SHHHHHHHHHHHTCCCEEET
T ss_pred             CCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeceeeCCCCCcc---chHHHHHHHHHcCCCceEec
Confidence                    23356789999999999999998887   89999999999999875321   111112233322222     


Q ss_pred             ----CCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          210 ----IGRAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       210 ----~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                          ...+.+++|++++++++++..   .+|+++++++|..+++
T Consensus       220 ~~~~~~~~i~v~Dva~~~~~~~~~~---~~g~~~~i~~~~~~s~  260 (348)
T 1oc2_A          220 EGKNVRDWIHTNDHSTGVWAILTKG---RMGETYLIGADGEKNN  260 (348)
T ss_dssp             TSCCEEECEEHHHHHHHHHHHHHHC---CTTCEEEECCSCEEEH
T ss_pred             CCCceEeeEEHHHHHHHHHHHhhCC---CCCCeEEeCCCCCCCH
Confidence                123567999999999998643   4799999999987654

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.93  E-value=2.2e-25  Score=181.63  Aligned_cols=194  Identities=13%  Similarity=0.073  Sum_probs=138.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCC-CEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||+|+||++++++|+++| ++|++++|+.++++..      ...++.++++|++|.++++++++        .+
T Consensus        24 k~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~------~~~~~~~~~~Dl~d~~~~~~~~~--------~~   89 (236)
T 3qvo_A           24 KNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP------YPTNSQIIMGDVLNHAALKQAMQ--------GQ   89 (236)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS------CCTTEEEEECCTTCHHHHHHHHT--------TC
T ss_pred             cEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc------ccCCcEEEEecCCCHHHHHHHhc--------CC
Confidence            589999999999999999999999 8999999998765432      13478899999999999888774        68


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChh---------h
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSL---------Y  150 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~---------Y  150 (259)
                      |+||||+|..        ..              ...++.+++.|++.+.++||++||..++.+.+....         +
T Consensus        90 D~vv~~a~~~--------~~--------------~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~  147 (236)
T 3qvo_A           90 DIVYANLTGE--------DL--------------DIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIGEP  147 (236)
T ss_dssp             SEEEEECCST--------TH--------------HHHHHHHHHHHHHTTCCEEEEECCCCC----------------CGG
T ss_pred             CEEEEcCCCC--------ch--------------hHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcccch
Confidence            9999999852        11              123456778888887889999999887655443211         1


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 024994          151 GAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPA  230 (259)
Q Consensus       151 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  230 (259)
                      ...+...       ...+.+.||+++.|+||++.++........         .......+++.+++|+++++++++++.
T Consensus       148 ~~~~~~~-------~~~l~~~gi~~~~vrPg~i~~~~~~~~~~~---------~~~~~~~~~~i~~~DvA~~i~~ll~~~  211 (236)
T 3qvo_A          148 LKPFRRA-------ADAIEASGLEYTILRPAWLTDEDIIDYELT---------SRNEPFKGTIVSRKSVAALITDIIDKP  211 (236)
T ss_dssp             GHHHHHH-------HHHHHTSCSEEEEEEECEEECCSCCCCEEE---------CTTSCCSCSEEEHHHHHHHHHHHHHST
T ss_pred             HHHHHHH-------HHHHHHCCCCEEEEeCCcccCCCCcceEEe---------ccCCCCCCcEECHHHHHHHHHHHHcCc
Confidence            1112111       122346799999999999998865332110         011122366789999999999999977


Q ss_pred             CCCccccEEEeCCCcee
Q 024994          231 ASYITGQIICVDGGVTV  247 (259)
Q Consensus       231 ~~~~~G~~l~~dgG~~~  247 (259)
                      ..++ |+.+.++++.+.
T Consensus       212 ~~~~-g~~~~i~~~~~~  227 (236)
T 3qvo_A          212 EKHI-GENIGINQPGTD  227 (236)
T ss_dssp             TTTT-TEEEEEECSSCC
T ss_pred             cccc-CeeEEecCCCCC
Confidence            6555 889999988654

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.93  E-value=7.1e-26  Score=191.76  Aligned_cols=215  Identities=18%  Similarity=0.112  Sum_probs=160.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+|+||.+++++|+++|..|++..|+....+.       ....+.++.+|+++ +++.++++        ++|
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~-------~~~~~~~~~~Dl~~-~~~~~~~~--------~~d   65 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEF-------VNEAARLVKADLAA-DDIKDYLK--------GAE   65 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGG-------SCTTEEEECCCTTT-SCCHHHHT--------TCS
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhh-------cCCCcEEEECcCCh-HHHHHHhc--------CCC
Confidence            579999999999999999999999666665555443221       13468899999999 77777663        799


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCcc-----------CCCCCChh
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV-----------RGIPSVSL  149 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~-----------~~~~~~~~  149 (259)
                      +|||+|+....    +.+.+++++.+++|+.++..+++++    .+.+.++||++||...+           .+..+...
T Consensus        66 ~vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~  137 (313)
T 3ehe_A           66 EVWHIAANPDV----RIGAENPDEIYRNNVLATYRLLEAM----RKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISL  137 (313)
T ss_dssp             EEEECCCCCCC----C-CCCCHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSH
T ss_pred             EEEECCCCCCh----hhhhhCHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCH
Confidence            99999996422    3345667889999999999999886    44456899999997654           23445678


Q ss_pred             hhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhc-CC---------CCCCCCHHHH
Q 024994          150 YGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQ-TP---------IGRAGEPDEV  219 (259)
Q Consensus       150 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~---------~~~~~~~~~v  219 (259)
                      |+.+|.+.+.+++.++.++   |++++.++|+.++++.....    ....+....... .+         ...+..++|+
T Consensus       138 Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv  210 (313)
T 3ehe_A          138 YGASKLACEALIESYCHTF---DMQAWIYRFANVIGRRSTHG----VIYDFIMKLKRNPEELEILGNGEQNKSYIYISDC  210 (313)
T ss_dssp             HHHHHHHHHHHHHHHHHHT---TCEEEEEECSCEESTTCCCS----HHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhc---CCCEEEEeeccccCcCCCcC----hHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHH
Confidence            9999999999999998886   89999999999999865421    111122222222 11         1235678999


Q ss_pred             HHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          220 SSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       220 a~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      ++++++++.   ....|+++++.+|..+++
T Consensus       211 a~a~~~~~~---~~~~~~~~ni~~~~~~s~  237 (313)
T 3ehe_A          211 VDAMLFGLR---GDERVNIFNIGSEDQIKV  237 (313)
T ss_dssp             HHHHHHHTT---CCSSEEEEECCCSCCEEH
T ss_pred             HHHHHHHhc---cCCCCceEEECCCCCeeH
Confidence            999999987   235789999999977654

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.93  E-value=4e-25  Score=189.18  Aligned_cols=228  Identities=18%  Similarity=0.056  Sum_probs=157.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHH-HHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDA-RLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||+|+||.+++++|+++|++|++++|+.+.... ..+++. ...++.++.+|++|.+++.++++.+      ++
T Consensus         4 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~------~~   76 (345)
T 2z1m_A            4 KRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELG-IENDVKIIHMDLLEFSNIIRTIEKV------QP   76 (345)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTT-CTTTEEECCCCTTCHHHHHHHHHHH------CC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhcc-ccCceeEEECCCCCHHHHHHHHHhc------CC
Confidence            689999999999999999999999999999998765321 112211 1246889999999999999888754      68


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCcc-----------CCCCCCh
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV-----------RGIPSVS  148 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~-----------~~~~~~~  148 (259)
                      |+||||||....    +.+.+++++.+++|+.++..+++++...   ...++||++||.+.+           .+.++..
T Consensus        77 d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~  149 (345)
T 2z1m_A           77 DEVYNLAAQSFV----GVSFEQPILTAEVDAIGVLRILEALRTV---KPDTKFYQASTSEMFGKVQEIPQTEKTPFYPRS  149 (345)
T ss_dssp             SEEEECCCCCCH----HHHTTSHHHHHHHHTHHHHHHHHHHHHH---CTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCS
T ss_pred             CEEEECCCCcch----hhhhhCHHHHHHHHHHHHHHHHHHHHHh---CCCceEEEEechhhcCCCCCCCCCccCCCCCCC
Confidence            999999997531    1123467889999999999999998642   113799999997543           2344567


Q ss_pred             hhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhc---------CCCCC-CCCHHH
Q 024994          149 LYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQ---------TPIGR-AGEPDE  218 (259)
Q Consensus       149 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~-~~~~~~  218 (259)
                      .|+.||++.+.+++.++.++   ++.+...+|..+..|.....................         .+..+ +..++|
T Consensus       150 ~Y~~sK~~~e~~~~~~~~~~---~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~D  226 (345)
T 2z1m_A          150 PYAVAKLFGHWITVNYREAY---NMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPE  226 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHh---CCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHH
Confidence            89999999999999999887   444444444444433321100000000011111111         11122 678999


Q ss_pred             HHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          219 VSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       219 va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      ++++++++++...    ++.+++.+|..+++
T Consensus       227 va~a~~~~~~~~~----~~~~~i~~~~~~s~  253 (345)
T 2z1m_A          227 YVEAMWLMMQQPE----PDDYVIATGETHTV  253 (345)
T ss_dssp             HHHHHHHHHTSSS----CCCEEECCSCCEEH
T ss_pred             HHHHHHHHHhCCC----CceEEEeCCCCccH
Confidence            9999999997542    36788888876554

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.93  E-value=2.6e-25  Score=193.33  Aligned_cols=221  Identities=17%  Similarity=0.048  Sum_probs=164.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+|+||++++++|+++|++|++++|+.......      ...++.++.+|++|.+++.++++        ++|
T Consensus        30 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~v~~~~~Dl~d~~~~~~~~~--------~~d   95 (379)
T 2c5a_A           30 LKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE------DMFCDEFHLVDLRVMENCLKVTE--------GVD   95 (379)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG------GGTCSEEEECCTTSHHHHHHHHT--------TCS
T ss_pred             CeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh------ccCCceEEECCCCCHHHHHHHhC--------CCC
Confidence            6899999999999999999999999999999986543211      12367888999999998887763        699


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccC------------------
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR------------------  142 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~------------------  142 (259)
                      +|||+|+.......   +.+++++.+++|+.++..+++++    .+.+.++||++||...+.                  
T Consensus        96 ~Vih~A~~~~~~~~---~~~~~~~~~~~Nv~g~~~ll~a~----~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~  168 (379)
T 2c5a_A           96 HVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMIEAA----RINGIKRFFYASSACIYPEFKQLETTNVSLKESDAW  168 (379)
T ss_dssp             EEEECCCCCCCHHH---HTTCHHHHHHHHHHHHHHHHHHH----HHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGS
T ss_pred             EEEECceecCcccc---cccCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCC
Confidence            99999997532111   12456788999999999999988    444567999999976532                  


Q ss_pred             CCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCC-CchHHHHhhhhcCC----------CC
Q 024994          143 GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGP-EGSEFLDGIARQTP----------IG  211 (259)
Q Consensus       143 ~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~-~~~~~~~~~~~~~~----------~~  211 (259)
                      +..+...|+.+|++.+.+++.++.++   |++++.++||+++++......... ....+...+....+          ..
T Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~  245 (379)
T 2c5a_A          169 PAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTR  245 (379)
T ss_dssp             SBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEE
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHH---CCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeE
Confidence            23346789999999999999998876   899999999999998754321110 11123333322221          12


Q ss_pred             CCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          212 RAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       212 ~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      .+..++|+++++++++...    .++.+++.+|..+++
T Consensus       246 ~~i~v~Dva~ai~~~l~~~----~~~~~ni~~~~~~s~  279 (379)
T 2c5a_A          246 SFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVSM  279 (379)
T ss_dssp             CCEEHHHHHHHHHHHHHSS----CCSCEEECCCCCEEH
T ss_pred             EEEEHHHHHHHHHHHhhcc----CCCeEEeCCCCccCH
Confidence            3556999999999998643    577899999877654

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.93  E-value=6.4e-26  Score=183.35  Aligned_cols=211  Identities=9%  Similarity=0.001  Sum_probs=157.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+|+||++++++|+++|++|++++|+.++....       ..++.++.+|++|.+++.++++        ++|
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~Dl~d~~~~~~~~~--------~~d   69 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE-------NEHLKVKKADVSSLDEVCEVCK--------GAD   69 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC-------CTTEEEECCCTTCHHHHHHHHT--------TCS
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc-------cCceEEEEecCCCHHHHHHHhc--------CCC
Confidence            5899999999999999999999999999999998765322       2478999999999999888774        689


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCC----------CCChhh
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI----------PSVSLY  150 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~----------~~~~~Y  150 (259)
                      +|||+||....          ..+.+++|+.++..+++++    .+.+.+++|++||.+...+.          .+...|
T Consensus        70 ~vi~~a~~~~~----------~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y  135 (227)
T 3dhn_A           70 AVISAFNPGWN----------NPDIYDETIKVYLTIIDGV----KKAGVNRFLMVGGAGSLFIAPGLRLMDSGEVPENIL  135 (227)
T ss_dssp             EEEECCCC----------------CCSHHHHHHHHHHHHH----HHTTCSEEEEECCSTTSEEETTEEGGGTTCSCGGGH
T ss_pred             EEEEeCcCCCC----------ChhHHHHHHHHHHHHHHHH----HHhCCCEEEEeCChhhccCCCCCccccCCcchHHHH
Confidence            99999986411          1126789999999998887    45556799999998765443          246789


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 024994          151 GAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPA  230 (259)
Q Consensus       151 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  230 (259)
                      +.+|++.+.+.+.++.   ..+++++.++||++.++..........    ............+.+++|+++++++++...
T Consensus       136 ~~sK~~~e~~~~~~~~---~~~~~~~ilrp~~v~g~~~~~~~~~~~----~~~~~~~~~~~~~i~~~Dva~ai~~~l~~~  208 (227)
T 3dhn_A          136 PGVKALGEFYLNFLMK---EKEIDWVFFSPAADMRPGVRTGRYRLG----KDDMIVDIVGNSHISVEDYAAAMIDELEHP  208 (227)
T ss_dssp             HHHHHHHHHHHHTGGG---CCSSEEEEEECCSEEESCCCCCCCEEE----SSBCCCCTTSCCEEEHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHHHhh---ccCccEEEEeCCcccCCCccccceeec----CCCcccCCCCCcEEeHHHHHHHHHHHHhCc
Confidence            9999999999988865   358999999999998886532110000    000000000123567999999999999643


Q ss_pred             CCCccccEEEeCCCceeee
Q 024994          231 ASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       231 ~~~~~G~~l~~dgG~~~~~  249 (259)
                        ...|+++.+.+....++
T Consensus       209 --~~~g~~~~~~~~~~~~~  225 (227)
T 3dhn_A          209 --KHHQERFTIGYLEHHHH  225 (227)
T ss_dssp             --CCCSEEEEEECCSCCC-
T ss_pred             --cccCcEEEEEeehhccc
Confidence              46899999998876654

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.93  E-value=1.1e-24  Score=189.41  Aligned_cols=232  Identities=16%  Similarity=0.015  Sum_probs=165.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhH-----HHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE-----LDARLHEWKNKGF-KVTGSVCDLSSREQREKLIETVTSI   74 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~   74 (259)
                      |++|||||+|+||.+++++|+++|++|++++|+.+.     ++.+..++...+. ++.++.+|++|.+++.++++.+   
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---  105 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI---  105 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc---
Confidence            589999999999999999999999999999997654     2222111111123 6888999999999998888754   


Q ss_pred             cCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC-CCCEEEEecCCCccC----------C
Q 024994           75 FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVGGVR----------G  143 (259)
Q Consensus        75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~isS~~~~~----------~  143 (259)
                         ++|+|||+||.....    .+.++++..+++|+.++..+++++.+...++ +.++||++||...+-          +
T Consensus       106 ---~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E~~~  178 (381)
T 1n7h_A          106 ---KPDEVYNLAAQSHVA----VSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTP  178 (381)
T ss_dssp             ---CCSEEEECCSCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSC
T ss_pred             ---CCCEEEECCcccCcc----ccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCCCCC
Confidence               689999999975321    2356788899999999999999998876542 346999999976542          2


Q ss_pred             CCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcC----------CCCCC
Q 024994          144 IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQT----------PIGRA  213 (259)
Q Consensus       144 ~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~  213 (259)
                      ..+...|+.+|++.+.+++.++.++   ++.+..++|..+..|......................          ....+
T Consensus       179 ~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~  255 (381)
T 1n7h_A          179 FHPRSPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDW  255 (381)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEEC
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeee
Confidence            3456789999999999999998887   7777778888777765421100000001111211111          11236


Q ss_pred             CCHHHHHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          214 GEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       214 ~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      ..++|+++++++++....    ++.+++.+|..+++
T Consensus       256 v~v~Dva~a~~~~~~~~~----~~~~~i~~~~~~s~  287 (381)
T 1n7h_A          256 GFAGDYVEAMWLMLQQEK----PDDYVVATEEGHTV  287 (381)
T ss_dssp             EEHHHHHHHHHHHHTSSS----CCEEEECCSCEEEH
T ss_pred             EEHHHHHHHHHHHHhCCC----CCeEEeeCCCCCcH
Confidence            679999999999986532    47899999976654

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.93  E-value=5.4e-25  Score=188.09  Aligned_cols=212  Identities=14%  Similarity=0.007  Sum_probs=156.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+|+||++++++|+++|++|++++|+.....+..   .. -.++.++.+|++|.++++++++.      .++|
T Consensus        22 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l---~~-~~~~~~~~~Dl~d~~~~~~~~~~------~~~D   91 (333)
T 2q1w_A           22 KKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHL---KD-HPNLTFVEGSIADHALVNQLIGD------LQPD   91 (333)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGS---CC-CTTEEEEECCTTCHHHHHHHHHH------HCCS
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhH---hh-cCCceEEEEeCCCHHHHHHHHhc------cCCc
Confidence            68999999999999999999999999999999754321111   11 13688899999999998888864      2699


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccC----CC--------CCC-
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR----GI--------PSV-  147 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~----~~--------~~~-  147 (259)
                      +|||+||.....     +.++++  +++|+.++..+++++.+    .+.++||++||...+-    ..        .+. 
T Consensus        92 ~vih~A~~~~~~-----~~~~~~--~~~N~~~~~~l~~a~~~----~~~~~iV~~SS~~~~g~~~~~~~~~~~E~~~p~~  160 (333)
T 2q1w_A           92 AVVHTAASYKDP-----DDWYND--TLTNCVGGSNVVQAAKK----NNVGRFVYFQTALCYGVKPIQQPVRLDHPRNPAN  160 (333)
T ss_dssp             EEEECCCCCSCT-----TCHHHH--HHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGCSCCCSSSBCTTSCCCCTT
T ss_pred             EEEECceecCCC-----ccCChH--HHHHHHHHHHHHHHHHH----hCCCEEEEECcHHHhCCCcccCCCCcCCCCCCCC
Confidence            999999975432     234444  89999999999999854    4568999999976643    21        234 


Q ss_pred             hhhhhhHHHHHHHHHH-HHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhc------CCCCCCCCHHHHH
Q 024994          148 SLYGAYKGAMNQLTKN-LACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQ------TPIGRAGEPDEVS  220 (259)
Q Consensus       148 ~~Y~~sK~a~~~~~~~-~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~va  220 (259)
                      ..|+.+|++.+.+++. ++        +++.++|+.+.++...    ......+.......      .+...+.+++|++
T Consensus       161 ~~Y~~sK~~~E~~~~~s~~--------~~~ilR~~~v~gp~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  228 (333)
T 2q1w_A          161 SSYAISKSANEDYLEYSGL--------DFVTFRLANVVGPRNV----SGPLPIFFQRLSEGKKCFVTKARRDFVFVKDLA  228 (333)
T ss_dssp             CHHHHHHHHHHHHHHHHTC--------CEEEEEESEEESTTCC----SSHHHHHHHHHHTTCCCEEEECEECEEEHHHHH
T ss_pred             CchHHHHHHHHHHHHhhhC--------CeEEEeeceEECcCCc----CcHHHHHHHHHHcCCeeeCCCceEeeEEHHHHH
Confidence            7899999999999987 64        6788999999887621    01111122222111      1223466899999


Q ss_pred             HHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          221 SLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       221 ~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      ++++++++...    |+++++++|..+++
T Consensus       229 ~ai~~~~~~~~----g~~~~v~~~~~~s~  253 (333)
T 2q1w_A          229 RATVRAVDGVG----HGAYHFSSGTDVAI  253 (333)
T ss_dssp             HHHHHHHTTCC----CEEEECSCSCCEEH
T ss_pred             HHHHHHHhcCC----CCEEEeCCCCCccH
Confidence            99999997543    89999999987654

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.93  E-value=2.5e-25  Score=190.93  Aligned_cols=214  Identities=16%  Similarity=0.072  Sum_probs=159.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+||||||+|+||.+++++|+++|++|++++|+.+.            .++.++.+|++|.+++.++++        ++|
T Consensus        20 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~------------~~~~~~~~Dl~d~~~~~~~~~--------~~d   79 (347)
T 4id9_A           20 HMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG------------TGGEEVVGSLEDGQALSDAIM--------GVS   79 (347)
T ss_dssp             -CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS------------SCCSEEESCTTCHHHHHHHHT--------TCS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC------------CCccEEecCcCCHHHHHHHHh--------CCC
Confidence            689999999999999999999999999999998765            367788999999999887764        799


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccC-------------CCCCC
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR-------------GIPSV  147 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~-------------~~~~~  147 (259)
                      +|||+|+....      +.+++++.+++|+.++..+++++    .+.+.++||++||...+-             +..+.
T Consensus        80 ~vih~A~~~~~------~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~  149 (347)
T 4id9_A           80 AVLHLGAFMSW------APADRDRMFAVNVEGTRRLLDAA----SAAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPN  149 (347)
T ss_dssp             EEEECCCCCCS------SGGGHHHHHHHHTHHHHHHHHHH----HHTTCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCC
T ss_pred             EEEECCcccCc------chhhHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEECCHHHhCCCCCCCCCcCCCCCCCCC
Confidence            99999996533      33445889999999999999988    445567999999965432             23456


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCcee-------------CCCCCCCc--------CCCCchHHHHhhhh
Q 024994          148 SLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIK-------------TSMIKPFE--------EGPEGSEFLDGIAR  206 (259)
Q Consensus       148 ~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~-------------t~~~~~~~--------~~~~~~~~~~~~~~  206 (259)
                      ..|+.+|.+.+.+++.++.++   +++++.++|+++.             ++......        .......+......
T Consensus       150 ~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (347)
T 4id9_A          150 SPYGLTKLLGEELVRFHQRSG---AMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDI  226 (347)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHS---SSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCC
T ss_pred             ChHHHHHHHHHHHHHHHHHhc---CCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHc
Confidence            789999999999999998775   8999999999998             33211000        00000111222222


Q ss_pred             cCC---------CCCC----CCHHHHHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          207 QTP---------IGRA----GEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       207 ~~~---------~~~~----~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      ..+         ...+    ..++|+++++++++....  ..|+++++.+|..+++
T Consensus       227 ~~~~~~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~--~~~~~~ni~~~~~~s~  280 (347)
T 4id9_A          227 GEPSHILARNENGRPFRMHITDTRDMVAGILLALDHPE--AAGGTFNLGADEPADF  280 (347)
T ss_dssp             SSCCEEEEECTTCCBCEECEEEHHHHHHHHHHHHHCGG--GTTEEEEESCSSCEEH
T ss_pred             CCCeEEeCCCCcccCCccCcEeHHHHHHHHHHHhcCcc--cCCCeEEECCCCcccH
Confidence            222         1123    778999999999996542  4589999999987654

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.93  E-value=2.7e-24  Score=186.07  Aligned_cols=231  Identities=16%  Similarity=0.069  Sum_probs=159.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHH-HHHHHHHh----cCCcEEEEEecCCCHHHHHHHHHHHHHHc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELD-ARLHEWKN----KGFKVTGSVCDLSSREQREKLIETVTSIF   75 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (259)
                      |++|||||+|+||++++++|+++|++|++++|+.+... ...+++..    .+.++.++.+|++|.+++.++++..    
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----   77 (372)
T 1db3_A            2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV----   77 (372)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH----
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc----
Confidence            68999999999999999999999999999999865421 11112111    1347888999999999998888754    


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCC-----------C
Q 024994           76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-----------I  144 (259)
Q Consensus        76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~-----------~  144 (259)
                        ++|+||||||.....    .+.+++++.+++|+.++..+++++.+...+ +.++||++||.+.+.+           .
T Consensus        78 --~~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~iv~~SS~~v~g~~~~~~~~E~~~~  150 (372)
T 1db3_A           78 --QPDEVYNLGAMSHVA----VSFESPEYTADVDAMGTLRLLEAIRFLGLE-KKTRFYQASTSELYGLVQEIPQKETTPF  150 (372)
T ss_dssp             --CCSEEEECCCCCTTT----TTTSCHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGGTTCCSSSBCTTSCC
T ss_pred             --CCCEEEECCcccCcc----ccccCHHHHHHHHHHHHHHHHHHHHHhCCC-CCcEEEEeCChhhhCCCCCCCCCccCCC
Confidence              689999999975432    234457788999999999999998655432 2389999999765422           2


Q ss_pred             CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcC-C---C------CCCC
Q 024994          145 PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQT-P---I------GRAG  214 (259)
Q Consensus       145 ~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-~---~------~~~~  214 (259)
                      .+...|+.||++.+.+++.++.++   ++.+..++|..+++|...................... +   .      ..+.
T Consensus       151 ~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i  227 (372)
T 1db3_A          151 YPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWG  227 (372)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCE
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHh---CCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeee
Confidence            346789999999999999999886   7888888888887775422100000011122222211 1   1      1256


Q ss_pred             CHHHHHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          215 EPDEVSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       215 ~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      .++|++++++.++....    ++.+++.+|..+++
T Consensus       228 ~v~Dva~a~~~~~~~~~----~~~~ni~~~~~~s~  258 (372)
T 1db3_A          228 HAKDYVKMQWMMLQQEQ----PEDFVIATGVQYSV  258 (372)
T ss_dssp             EHHHHHHHHHHTTSSSS----CCCEEECCCCCEEH
T ss_pred             EHHHHHHHHHHHHhcCC----CceEEEcCCCceeH
Confidence            78999999988875432    46789888876554

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.93  E-value=6.2e-25  Score=193.87  Aligned_cols=221  Identities=13%  Similarity=0.078  Sum_probs=159.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChh---HHHHHHHHHHh---------cCCcEEEEEecCCCHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI---ELDARLHEWKN---------KGFKVTGSVCDLSSREQREKLI   68 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~---------~~~~~~~~~~D~~~~~~~~~~~   68 (259)
                      |+||||||+|+||.+++++|+++|++|++++|+.+   ..+.+.+.+..         ...++.++.+|++|.+++.   
T Consensus        70 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~---  146 (427)
T 4f6c_A           70 GNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV---  146 (427)
T ss_dssp             EEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC---
T ss_pred             CEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC---
Confidence            48999999999999999999999999999999887   33333333221         1357999999999987776   


Q ss_pred             HHHHHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCc--------
Q 024994           69 ETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG--------  140 (259)
Q Consensus        69 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~--------  140 (259)
                           .+ +++|+|||||+...       ..+++++.+++|+.++..+++++.+     +..++|++||...        
T Consensus       147 -----~~-~~~d~Vih~A~~~~-------~~~~~~~~~~~Nv~g~~~l~~aa~~-----~~~~~v~~SS~~~G~~~~~~~  208 (427)
T 4f6c_A          147 -----LP-ENMDTIIHAGARTD-------HFGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISVGTYFDIDT  208 (427)
T ss_dssp             -----CS-SCCSEEEECCCCC--------------CHHHHHHHHHHHHHHHHHH-----TTCEEEEEEEGGGGSEECSSC
T ss_pred             -----Cc-CCCCEEEECCcccC-------CCCCHHHHHHHHHHHHHHHHHHHHh-----cCCcEEEECchHhCCCccCCC
Confidence                 23 68999999999753       2356788999999999999999854     4589999999876        


Q ss_pred             ----------cCCCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCC----chHHHHhhhh
Q 024994          141 ----------VRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPE----GSEFLDGIAR  206 (259)
Q Consensus       141 ----------~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~----~~~~~~~~~~  206 (259)
                                ..+..+...|+.+|++.+.+++.++.    .|++++.++||+|.++..........    ..........
T Consensus       209 ~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  284 (427)
T 4f6c_A          209 EDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQ  284 (427)
T ss_dssp             SCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH----TTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHH
T ss_pred             CCccccccccccCCCCCCchHHHHHHHHHHHHHHHH----cCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHh
Confidence                      00122678899999999999998753    58999999999999987654321110    1122333222


Q ss_pred             cCCC--------CCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          207 QTPI--------GRAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       207 ~~~~--------~~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      ..+.        ..+.+++|+++++++++....   .|+++++++|..+++
T Consensus       285 ~~~~~~~~~~~~~~~v~v~DvA~ai~~~~~~~~---~g~~~~l~~~~~~s~  332 (427)
T 4f6c_A          285 LDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT---PQIIYHVLSPNKMPV  332 (427)
T ss_dssp             SSEEEHHHHTCEECCEEHHHHHHHHHHHTTSCC---CCSEEEESCSCCEEH
T ss_pred             cCCCCCccccceEEEeeHHHHHHHHHHHHcCCC---CCCEEEecCCCCCcH
Confidence            2221        226678999999999986543   899999999987654

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.93  E-value=1.2e-24  Score=189.04  Aligned_cols=222  Identities=13%  Similarity=0.058  Sum_probs=162.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCC-CEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||+|+||.+++++|+++| ++|++++|+.......   +. ...++.++.+|++|.+++++++        .++
T Consensus        33 ~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~---l~-~~~~v~~~~~Dl~d~~~l~~~~--------~~~  100 (377)
T 2q1s_A           33 TNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKIN---VP-DHPAVRFSETSITDDALLASLQ--------DEY  100 (377)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGG---SC-CCTTEEEECSCTTCHHHHHHCC--------SCC
T ss_pred             CEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhh---cc-CCCceEEEECCCCCHHHHHHHh--------hCC
Confidence            589999999999999999999999 9999999986543211   10 1347889999999998876655        379


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC-CCCEEEEecCCCccC----------------
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVGGVR----------------  142 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~isS~~~~~----------------  142 (259)
                      |+|||+|+.....    .+.+++++.+++|+.++..+++++    .+. +.++||++||...+-                
T Consensus       101 d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~  172 (377)
T 2q1s_A          101 DYVFHLATYHGNQ----SSIHDPLADHENNTLTTLKLYERL----KHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIV  172 (377)
T ss_dssp             SEEEECCCCSCHH----HHHHCHHHHHHHHTHHHHHHHHHH----TTCSSCCEEEEEEEC--------------CCCCCC
T ss_pred             CEEEECCCccCch----hhhhCHHHHHHHHHHHHHHHHHHH----HHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccc
Confidence            9999999964321    234567889999999999999988    444 567999999975321                


Q ss_pred             CC-CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCC---------CCCcC-CCCchHHHHhhhhcCCCC
Q 024994          143 GI-PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI---------KPFEE-GPEGSEFLDGIARQTPIG  211 (259)
Q Consensus       143 ~~-~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~---------~~~~~-~~~~~~~~~~~~~~~~~~  211 (259)
                      +. .+...|+.+|++.+.+++.++.++   |++++.++||.+.++..         ..... ......+...+....+..
T Consensus       173 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~  249 (377)
T 2q1s_A          173 SLHNNDSPYSMSKIFGEFYSVYYHKQH---QLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLP  249 (377)
T ss_dssp             CSSCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCC
T ss_pred             cccCCCCchHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeE
Confidence            22 456789999999999999998876   89999999999999875         11000 111122333333333332


Q ss_pred             C---------CCCHHHHHHH-HHHHhCCCCCCccccEEEeCCCceeee
Q 024994          212 R---------AGEPDEVSSL-VAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       212 ~---------~~~~~~va~~-~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      .         +..++|++++ +++++....   +| ++++++|..+++
T Consensus       250 ~~g~g~~~~~~i~v~Dva~a~i~~~~~~~~---~g-~~~i~~~~~~s~  293 (377)
T 2q1s_A          250 LENGGVATRDFIFVEDVANGLIACAADGTP---GG-VYNIASGKETSI  293 (377)
T ss_dssp             CSGGGCCEECCEEHHHHHHHHHHHHHHCCT---TE-EEECCCCCCEEH
T ss_pred             EeCCCCeEEeeEEHHHHHHHHHHHHHhcCC---CC-eEEecCCCceeH
Confidence            2         3458999999 988886532   78 999999876654

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.93  E-value=1.3e-24  Score=186.03  Aligned_cols=224  Identities=15%  Similarity=0.109  Sum_probs=163.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHC-CCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARF-GAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS-REQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||+|+||.+++++|+++ |++|++++|+.++.+...     ...++.++.+|++| .+.++++++        +
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~--------~   67 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHVK--------K   67 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-----TCTTEEEEECCTTTCSHHHHHHHH--------H
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh-----cCCCeEEEeccccCcHHHHHhhcc--------C
Confidence            78999999999999999999998 899999999877653321     13478899999998 455666553        5


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCC-------------
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIP-------------  145 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~-------------  145 (259)
                      +|+|||+||......    ..+++++.+++|+.++..+++++    .+.+ +++|++||...+-..+             
T Consensus        68 ~d~vih~A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~  138 (345)
T 2bll_A           68 CDVVLPLVAIATPIE----YTRNPLRVFELDFEENLRIIRYC----VKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIV  138 (345)
T ss_dssp             CSEEEECBCCCCHHH----HHHSHHHHHHHHTHHHHHHHHHH----HHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBC
T ss_pred             CCEEEEcccccCccc----hhcCHHHHHHHHHHHHHHHHHHH----HHhC-CeEEEEecHHHcCCCCCCCcCCccccccc
Confidence            899999999753211    23456788999999999998887    3444 8999999976542211             


Q ss_pred             -----CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcC---CC--CchHHHHhhhhcCCC-----
Q 024994          146 -----SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE---GP--EGSEFLDGIARQTPI-----  210 (259)
Q Consensus       146 -----~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~---~~--~~~~~~~~~~~~~~~-----  210 (259)
                           +...|+.+|.+.+.+++.++.++   |++++.++|+.++++.......   ..  ....+........+.     
T Consensus       139 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (345)
T 2bll_A          139 GPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDG  215 (345)
T ss_dssp             CCTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGG
T ss_pred             CcccCcccccHHHHHHHHHHHHHHHHhc---CCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECC
Confidence                 12379999999999999998776   8999999999999987543211   00  011122222222221     


Q ss_pred             ----CCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCc-eeee
Q 024994          211 ----GRAGEPDEVSSLVAFLCLPAASYITGQIICVDGGV-TVTV  249 (259)
Q Consensus       211 ----~~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~-~~~~  249 (259)
                          ..+..++|+++++++++........|+++++.+|. .+++
T Consensus       216 g~~~~~~i~v~Dva~a~~~~~~~~~~~~~g~~~~i~~~~~~~s~  259 (345)
T 2bll_A          216 GKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASI  259 (345)
T ss_dssp             SCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTSEEEH
T ss_pred             CCEEEEEEEHHHHHHHHHHHHhhccccCCCceEEeCCCCCCCCH
Confidence                12567999999999998754334679999999985 5554

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.93  E-value=2.3e-24  Score=184.26  Aligned_cols=216  Identities=18%  Similarity=0.112  Sum_probs=153.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhc---CCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK---GFKVTGSVCDLSSREQREKLIETVTSIFQG   77 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (259)
                      |++|||||+|+||++++++|+++|++|+++.|+.+...... .+...   ..++.++++|++|.++++++++        
T Consensus         6 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--------   76 (337)
T 2c29_D            6 ETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVK-HLLDLPKAETHLTLWKADLADEGSFDEAIK--------   76 (337)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHH-HHHTSTTHHHHEEEEECCTTSTTTTHHHHT--------
T ss_pred             CEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHH-HHHhcccCCCeEEEEEcCCCCHHHHHHHHc--------
Confidence            68999999999999999999999999999999876443221 11111   1258889999999988877763        


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCC------------
Q 024994           78 KLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIP------------  145 (259)
Q Consensus        78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~------------  145 (259)
                      .+|+|||+|+...   ....  +..++.+++|+.++..+++++.+..   ..++||++||.++..+.+            
T Consensus        77 ~~d~Vih~A~~~~---~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~---~~~riV~~SS~~~~~~~~~~~~~~~E~~~~  148 (337)
T 2c29_D           77 GCTGVFHVATPMD---FESK--DPENEVIKPTIEGMLGIMKSCAAAK---TVRRLVFTSSAGTVNIQEHQLPVYDESCWS  148 (337)
T ss_dssp             TCSEEEECCCCCC---SSCS--SHHHHTHHHHHHHHHHHHHHHHHHS---CCCEEEEECCGGGTSCSSSCCSEECTTCCC
T ss_pred             CCCEEEEeccccC---CCCC--ChHHHHHHHHHHHHHHHHHHHHhCC---CccEEEEeeeHhhcccCCCCCcccCcccCC
Confidence            5899999998641   2212  2235688999999999999885432   257999999987544321            


Q ss_pred             ----------CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHh---h------hh
Q 024994          146 ----------SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDG---I------AR  206 (259)
Q Consensus       146 ----------~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~---~------~~  206 (259)
                                +...|+.||.+.+.+++.++.++   |++++.++|+++++|.......    ......   .      ..
T Consensus       149 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~~lrp~~v~Gp~~~~~~~----~~~~~~~~~~~g~~~~~~  221 (337)
T 2c29_D          149 DMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKEN---NIDFITIIPTLVVGPFIMSSMP----PSLITALSPITGNEAHYS  221 (337)
T ss_dssp             CHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHH---TCCEEEEEECEEESCCSCSSCC----HHHHHHTHHHHTCGGGHH
T ss_pred             chhhhcccCCccchHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCceECCCCCCCCC----chHHHHHHHHcCCCcccc
Confidence                      23369999999999998887654   8999999999999997543211    001100   0      00


Q ss_pred             cCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCC
Q 024994          207 QTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVDG  243 (259)
Q Consensus       207 ~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dg  243 (259)
                      ..+..++..++|+++++++++...  ...|.+ ++.+
T Consensus       222 ~~~~~~~i~v~Dva~a~~~~~~~~--~~~~~~-~~~~  255 (337)
T 2c29_D          222 IIRQGQFVHLDDLCNAHIYLFENP--KAEGRY-ICSS  255 (337)
T ss_dssp             HHTEEEEEEHHHHHHHHHHHHHCT--TCCEEE-EECC
T ss_pred             ccCCCCEEEHHHHHHHHHHHhcCc--ccCceE-EEeC
Confidence            112334789999999999988642  345654 4433

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.93  E-value=1.7e-24  Score=187.74  Aligned_cols=231  Identities=16%  Similarity=0.023  Sum_probs=162.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhH-----HHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE-----LDARLHEWKN-KGFKVTGSVCDLSSREQREKLIETVTSI   74 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~   74 (259)
                      |++|||||+|+||++++++|+++|++|++++|+.+.     ++.+..++.. ...++.++.+|++|.+++.++++.+   
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV---  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc---
Confidence            589999999999999999999999999999997543     2221111110 1346889999999999998888754   


Q ss_pred             cCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCC-----------
Q 024994           75 FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-----------  143 (259)
Q Consensus        75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~-----------  143 (259)
                         ++|+|||+||.....    .+.+++++.+++|+.++..+++++.+... .+.++||++||...+..           
T Consensus       102 ---~~d~vih~A~~~~~~----~~~~~~~~~~~~N~~g~~~l~~a~~~~~~-~~~~~iv~~SS~~~~~~~~~~~~~E~~~  173 (375)
T 1t2a_A          102 ---KPTEIYNLGAQSHVK----ISFDLAEYTADVDGVGTLRLLDAVKTCGL-INSVKFYQASTSELYGKVQEIPQKETTP  173 (375)
T ss_dssp             ---CCSEEEECCSCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHTTC-TTTCEEEEEEEGGGTCSCSSSSBCTTSC
T ss_pred             ---CCCEEEECCCccccc----ccccCHHHHHHHHHHHHHHHHHHHHHhCC-CccceEEEecchhhhCCCCCCCCCccCC
Confidence               689999999974321    13467788999999999999999865442 12379999999766432           


Q ss_pred             CCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhc-CC---C------CCC
Q 024994          144 IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQ-TP---I------GRA  213 (259)
Q Consensus       144 ~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~---~------~~~  213 (259)
                      ..+...|+.+|++.+.+++.++.++   ++++..++|+.+.+|.................+... .+   .      ..+
T Consensus       174 ~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~  250 (375)
T 1t2a_A          174 FYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDW  250 (375)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECC
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeee
Confidence            2345789999999999999998877   789999999988877542110000001112222221 11   1      125


Q ss_pred             CCHHHHHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          214 GEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       214 ~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      ..++|++++++.++....    ++.+++.+|..+++
T Consensus       251 i~v~Dva~a~~~~~~~~~----~~~~ni~~~~~~s~  282 (375)
T 1t2a_A          251 GHAKDYVEAMWLMLQNDE----PEDFVIATGEVHSV  282 (375)
T ss_dssp             EEHHHHHHHHHHHHHSSS----CCCEEECCSCCEEH
T ss_pred             EEHHHHHHHHHHHHhcCC----CceEEEeCCCcccH
Confidence            578999999998886432    36788888876554

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.92  E-value=3.9e-25  Score=190.99  Aligned_cols=222  Identities=16%  Similarity=0.095  Sum_probs=158.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHH--CCCEEEEeeCChhHHHHHH-------HHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELAR--FGAIVHTCSRNQIELDARL-------HEWKNKGFKVTGSVCDLSSREQREKLIETV   71 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~--~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   71 (259)
                      |+||||||+|+||++++++|++  +|++|++++|+........       ......+.++.++.+|++|.++++++    
T Consensus        11 ~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~----   86 (362)
T 3sxp_A           11 QTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRL----   86 (362)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHH----
T ss_pred             CEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHh----
Confidence            6899999999999999999999  9999999999765211000       00011234678999999999988876    


Q ss_pred             HHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCC--------
Q 024994           72 TSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG--------  143 (259)
Q Consensus        72 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~--------  143 (259)
                        .. .++|+|||+||....      +.+++++.+++|+.++..+++++    .+.+ .+||++||...+-.        
T Consensus        87 --~~-~~~D~vih~A~~~~~------~~~~~~~~~~~Nv~gt~~ll~aa----~~~~-~~~V~~SS~~vyg~~~~~~~E~  152 (362)
T 3sxp_A           87 --EK-LHFDYLFHQAAVSDT------TMLNQELVMKTNYQAFLNLLEIA----RSKK-AKVIYASSAGVYGNTKAPNVVG  152 (362)
T ss_dssp             --TT-SCCSEEEECCCCCGG------GCCCHHHHHHHHTHHHHHHHHHH----HHTT-CEEEEEEEGGGGCSCCSSBCTT
T ss_pred             --hc-cCCCEEEECCccCCc------cccCHHHHHHHHHHHHHHHHHHH----HHcC-CcEEEeCcHHHhCCCCCCCCCC
Confidence              12 579999999996422      33567889999999999999988    4443 56999999554322        


Q ss_pred             --CCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcC-CCCchHHHHhhhhcCCC---------C
Q 024994          144 --IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE-GPEGSEFLDGIARQTPI---------G  211 (259)
Q Consensus       144 --~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~---------~  211 (259)
                        ..+...|+.||++.+.+++.++.+     ++++.++|+.+.+|....... ......+........+.         .
T Consensus       153 ~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  227 (362)
T 3sxp_A          153 KNESPENVYGFSKLCMDEFVLSHSND-----NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLR  227 (362)
T ss_dssp             SCCCCSSHHHHHHHHHHHHHHHTTTT-----SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEE
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHhcc-----CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEE
Confidence              123456999999999999988654     789999999999887543211 01111233333332222         1


Q ss_pred             CCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          212 RAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       212 ~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      .+..++|+++++++++...   .+| ++++++|..+++
T Consensus       228 ~~i~v~Dva~ai~~~~~~~---~~g-~~~i~~~~~~s~  261 (362)
T 3sxp_A          228 DFVYIEDVIQANVKAMKAQ---KSG-VYNVGYSQARSY  261 (362)
T ss_dssp             ECEEHHHHHHHHHHHTTCS---SCE-EEEESCSCEEEH
T ss_pred             ccEEHHHHHHHHHHHHhcC---CCC-EEEeCCCCCccH
Confidence            2456899999999999754   367 999999987654

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.92  E-value=2.7e-24  Score=183.22  Aligned_cols=226  Identities=14%  Similarity=0.075  Sum_probs=162.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+|+||.+++++|+++|++|++++|+.....+      ....++.++.+|++|.+++++++++      .++|
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~D~~~~~~~~~~~~~------~~~d   69 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHED------AITEGAKFYNGDLRDKAFLRDVFTQ------ENIE   69 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG------GSCTTSEEEECCTTCHHHHHHHHHH------SCEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchh------hcCCCcEEEECCCCCHHHHHHHHhh------cCCC
Confidence            689999999999999999999999999999987643221      1122678899999999998888764      3799


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCC-----------CCCChh
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-----------IPSVSL  149 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~-----------~~~~~~  149 (259)
                      +|||+|+.....    .+.+++++.+++|+.++..+++++    .+.+.+++|++||...+..           ..+...
T Consensus        70 ~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~  141 (330)
T 2c20_A           70 AVMHFAADSLVG----VSMEKPLQYYNNNVYGALCLLEVM----DEFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNT  141 (330)
T ss_dssp             EEEECCCCCCHH----HHHHSHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSH
T ss_pred             EEEECCcccCcc----ccccCHHHHHHHHhHHHHHHHHHH----HHcCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCCh
Confidence            999999975321    134677889999999999999987    4455679999999765421           224678


Q ss_pred             hhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcC-----CCC-chHHHHhhhhc-CCC------------
Q 024994          150 YGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE-----GPE-GSEFLDGIARQ-TPI------------  210 (259)
Q Consensus       150 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~-----~~~-~~~~~~~~~~~-~~~------------  210 (259)
                      |+.+|++.+.+++.++.++   |++++.++|+++.++.......     ... ........... .++            
T Consensus       142 Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g  218 (330)
T 2c20_A          142 YGETKLAIEKMLHWYSQAS---NLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDG  218 (330)
T ss_dssp             HHHHHHHHHHHHHHHHHTS---SCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSS
T ss_pred             HHHHHHHHHHHHHHHHHHh---CCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCC
Confidence            9999999999999998765   8999999999999886322110     011 01111111111 111            


Q ss_pred             ---CCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          211 ---GRAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       211 ---~~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                         ..+..++|++++++.++........++++++.+|..+++
T Consensus       219 ~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~  260 (330)
T 2c20_A          219 TCIRDYIHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGFSV  260 (330)
T ss_dssp             SCEECEEEHHHHHHHHHHHHHHHHTTCCCEEEECCCTTCBCH
T ss_pred             ceeEeeEeHHHHHHHHHHHHhccccCCCCCeEEeCCCCCccH
Confidence               124568999999988875322222468999988876553

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.92  E-value=2e-24  Score=184.42  Aligned_cols=227  Identities=18%  Similarity=0.062  Sum_probs=162.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHH-HHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELD-ARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||+|+||.+++++|+++|++|++++|+.+... ...+.+. ...++.++.+|++|.+++.++++..      ++
T Consensus        15 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~------~~   87 (335)
T 1rpn_A           15 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG-IEGDIQYEDGDMADACSVQRAVIKA------QP   87 (335)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHH------CC
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhcc-ccCceEEEECCCCCHHHHHHHHHHc------CC
Confidence            68999999999999999999999999999999865421 1111111 1346889999999999998888754      68


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccCCC-----------CCC
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGI-----------PSV  147 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~~~-----------~~~  147 (259)
                      |+|||+|+.....    .+.+++++.+++|+.++..+++++.+    .+ .+++|++||.+.+.+.           .+.
T Consensus        88 d~Vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~  159 (335)
T 1rpn_A           88 QEVYNLAAQSFVG----ASWNQPVTTGVVDGLGVTHLLEAIRQ----FSPETRFYQASTSEMFGLIQAERQDENTPFYPR  159 (335)
T ss_dssp             SEEEECCSCCCHH----HHTTSHHHHHHHHTHHHHHHHHHHHH----HCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCC
T ss_pred             CEEEECccccchh----hhhhChHHHHHHHHHHHHHHHHHHHH----hCCCCeEEEEeCHHHhCCCCCCCCCcccCCCCC
Confidence            9999999964321    11235678899999999999998843    33 3799999997654321           235


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcC-C---CC------CCCCHH
Q 024994          148 SLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQT-P---IG------RAGEPD  217 (259)
Q Consensus       148 ~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-~---~~------~~~~~~  217 (259)
                      ..|+.+|++.+.+++.++.++   +++++.++|+.+.+|...................... +   .+      .+..++
T Consensus       160 ~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~  236 (335)
T 1rpn_A          160 SPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAG  236 (335)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHc---CCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHH
Confidence            689999999999999998876   7899999999998886432110000011122222221 1   11      245689


Q ss_pred             HHHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          218 EVSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       218 ~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      |++++++.++....    ++.+++.+|..+++
T Consensus       237 Dva~a~~~~~~~~~----~~~~ni~~~~~~s~  264 (335)
T 1rpn_A          237 DYVEAMWLMLQQDK----ADDYVVATGVTTTV  264 (335)
T ss_dssp             HHHHHHHHHHHSSS----CCCEEECCSCEEEH
T ss_pred             HHHHHHHHHHhcCC----CCEEEEeCCCCccH
Confidence            99999998886432    36899988876654

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.92  E-value=7.6e-24  Score=181.04  Aligned_cols=233  Identities=16%  Similarity=0.062  Sum_probs=158.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKN-KGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||+|+||++++++|+++|++|++++|...........+.. .+.++.++.+|++|.++++++++.      .++
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~------~~~   74 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHD------HAI   74 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHH------TTC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhc------cCC
Confidence            6899999999999999999999999999998643211111112221 134678889999999998888764      269


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccC-----------CC-CCC
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR-----------GI-PSV  147 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~-----------~~-~~~  147 (259)
                      |+||||||......    ..++.++.+++|+.++..+++++    .+.+.++||++||...+-           +. ++.
T Consensus        75 D~vih~A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~  146 (338)
T 1udb_A           75 DTVIHFAGLKAVGE----SVQKPLEYYDNNVNGTLRLISAM----RAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQ  146 (338)
T ss_dssp             SEEEECCSCCCHHH----HHHCHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCS
T ss_pred             CEEEECCccCcccc----chhcHHHHHHHHHHHHHHHHHHH----HhcCCCeEEEEccHHHhCCCCCCCcCcccCCCCCC
Confidence            99999999643211    23456778999999999998876    444567999999976532           11 236


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcC-C-----CC-chHHHHhhh-hcCC----------
Q 024994          148 SLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE-G-----PE-GSEFLDGIA-RQTP----------  209 (259)
Q Consensus       148 ~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~-~-----~~-~~~~~~~~~-~~~~----------  209 (259)
                      ..|+.||++++.+++.++.++  .+++++.++|+.+.++....... .     .. ......... ...+          
T Consensus       147 ~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  224 (338)
T 1udb_A          147 SPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPT  224 (338)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSS
T ss_pred             ChHHHHHHHHHHHHHHHHHhc--CCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccC
Confidence            789999999999999998774  37999999999988763211110 0     01 011111111 1111          


Q ss_pred             -C----CCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          210 -I----GRAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       210 -~----~~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                       .    ..+..++|++++++.++........++++++.+|..+++
T Consensus       225 ~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~~~s~  269 (338)
T 1udb_A          225 EDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSV  269 (338)
T ss_dssp             SSSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSCCEEH
T ss_pred             CCCceeeeeEEHHHHHHHHHHHHhhhhccCCCcEEEecCCCceeH
Confidence             0    124568999999887774211112347899988876543

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.92  E-value=2e-24  Score=183.24  Aligned_cols=222  Identities=16%  Similarity=0.081  Sum_probs=147.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeC-ChhHH---HHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSR-NQIEL---DARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ   76 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r-~~~~~---~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (259)
                      |++|||||+|+||++++++|+++|++|++++| +.+..   ... .++.....++.++.+|++|.++++++++       
T Consensus         2 k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   73 (322)
T 2p4h_X            2 GRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFL-TNLPGASEKLHFFNADLSNPDSFAAAIE-------   73 (322)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHH-HTSTTHHHHEEECCCCTTCGGGGHHHHT-------
T ss_pred             CEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHH-HhhhccCCceEEEecCCCCHHHHHHHHc-------
Confidence            78999999999999999999999999999998 55321   111 1111001257888999999988887764       


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHH-HHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCC---------
Q 024994           77 GKLNILINNAAIAFVKPTVDITAED-MSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPS---------  146 (259)
Q Consensus        77 ~~id~vi~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~---------  146 (259)
                       .+|+|||+|+..      +.+.++ +++++++|+.+++.+++++.+.   .+.++||++||..+..+.+.         
T Consensus        74 -~~d~vih~A~~~------~~~~~~~~~~~~~~nv~gt~~l~~aa~~~---~~~~~iV~~SS~~~~~~~~~~~~~~~e~~  143 (322)
T 2p4h_X           74 -GCVGIFHTASPI------DFAVSEPEEIVTKRTVDGALGILKACVNS---KTVKRFIYTSSGSAVSFNGKDKDVLDESD  143 (322)
T ss_dssp             -TCSEEEECCCCC--------------CHHHHHHHHHHHHHHHHHTTC---SSCCEEEEEEEGGGTSCSSSCCSEECTTC
T ss_pred             -CCCEEEEcCCcc------cCCCCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeccHHHcccCCCCCeecCCcc
Confidence             589999999742      112222 4568999999999999998432   14579999999875433211         


Q ss_pred             ------------C-hhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhh---cCCC
Q 024994          147 ------------V-SLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIAR---QTPI  210 (259)
Q Consensus       147 ------------~-~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~---~~~~  210 (259)
                                  . ..|+.||.+.+.+++.++.+   .|++++.++|+++++|+...... ............   ..+.
T Consensus       144 ~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~g~~~~~~~~-~~~~~~~~~~~g~~~~~~~  219 (322)
T 2p4h_X          144 WSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ---NGIDVVTLILPFIVGRFVCPKLP-DSIEKALVLVLGKKEQIGV  219 (322)
T ss_dssp             CCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---TTCCEEEEEECEEESCCCSSSCC-HHHHHHTHHHHSCGGGCCE
T ss_pred             ccchhhhcccCcccccHHHHHHHHHHHHHHHHHh---cCCcEEEEcCCceECCCCCCCCC-chHHHHHHHHhCCCccCcC
Confidence                        1 16999999988887776544   48999999999999997643211 000000000111   1111


Q ss_pred             C--CCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCceee
Q 024994          211 G--RAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVT  248 (259)
Q Consensus       211 ~--~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~  248 (259)
                      .  .+.+++|++++++++++..  ..+|+ +++. +..++
T Consensus       220 ~~~~~i~v~Dva~a~~~~~~~~--~~~g~-~~~~-~~~~s  255 (322)
T 2p4h_X          220 TRFHMVHVDDVARAHIYLLENS--VPGGR-YNCS-PFIVP  255 (322)
T ss_dssp             EEEEEEEHHHHHHHHHHHHHSC--CCCEE-EECC-CEEEE
T ss_pred             CCcCEEEHHHHHHHHHHHhhCc--CCCCC-EEEc-CCCCC
Confidence            1  3678999999999998642  25776 5554 44443

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.92  E-value=9.7e-24  Score=178.50  Aligned_cols=210  Identities=14%  Similarity=0.065  Sum_probs=157.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+|+||.+++++|+++|++|++++|+....+  .+       ++.++.+|++ .+++.++++        ++|
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~-------~~~~~~~Dl~-~~~~~~~~~--------~~d   64 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA--IN-------DYEYRVSDYT-LEDLINQLN--------DVD   64 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC--------------CCEEEECCCC-HHHHHHHTT--------TCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc--CC-------ceEEEEcccc-HHHHHHhhc--------CCC
Confidence            68999999999999999999999999999999844332  11       6788999999 888777663        799


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCC-----------CCCChh
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-----------IPSVSL  149 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~-----------~~~~~~  149 (259)
                      +|||+|+.....        +.++.+++|+.++..+++++    .+.+.+++|++||...+-.           ..+...
T Consensus        65 ~Vih~a~~~~~~--------~~~~~~~~n~~~~~~ll~a~----~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~  132 (311)
T 3m2p_A           65 AVVHLAATRGSQ--------GKISEFHDNEILTQNLYDAC----YENNISNIVYASTISAYSDETSLPWNEKELPLPDLM  132 (311)
T ss_dssp             EEEECCCCCCSS--------SCGGGTHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSH
T ss_pred             EEEEccccCCCC--------ChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCch
Confidence            999999976443        34556789999999999888    5555679999999655422           224578


Q ss_pred             hhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCC---------CCCCHHHHH
Q 024994          150 YGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIG---------RAGEPDEVS  220 (259)
Q Consensus       150 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~va  220 (259)
                      |+.+|.+.+.+++.++.+.   |++++.++|+.+.++.....   .....+........+..         .+..++|++
T Consensus       133 Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva  206 (311)
T 3m2p_A          133 YGVSKLACEHIGNIYSRKK---GLCIKNLRFAHLYGFNEKNN---YMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAA  206 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHHS---CCEEEEEEECEEECSCC--C---CHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHc---CCCEEEEeeCceeCcCCCCC---CHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHH
Confidence            9999999999999997754   89999999999998876422   11112333333332221         244679999


Q ss_pred             HHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          221 SLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       221 ~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      +++..++....   .|+++++.+|..++.
T Consensus       207 ~a~~~~~~~~~---~~~~~~i~~~~~~s~  232 (311)
T 3m2p_A          207 KSVIYALKQEK---VSGTFNIGSGDALTN  232 (311)
T ss_dssp             HHHHHHTTCTT---CCEEEEECCSCEECH
T ss_pred             HHHHHHHhcCC---CCCeEEeCCCCcccH
Confidence            99999886543   789999999987654

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.92  E-value=1.8e-24  Score=187.35  Aligned_cols=223  Identities=17%  Similarity=0.129  Sum_probs=166.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHC-CCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCC-CHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARF-GAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLS-SREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~~~~   78 (259)
                      |+||||||+|+||.+++++|+++ |++|++++|+.+.......     ..++.++.+|++ |.+.+.++++        +
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-----~~~v~~~~~Dl~~d~~~~~~~~~--------~   91 (372)
T 3slg_A           25 KKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK-----HERMHFFEGDITINKEWVEYHVK--------K   91 (372)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG-----STTEEEEECCTTTCHHHHHHHHH--------H
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc-----CCCeEEEeCccCCCHHHHHHHhc--------c
Confidence            68999999999999999999998 9999999998866543321     247999999999 9999888775        5


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCC--------------
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI--------------  144 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~--------------  144 (259)
                      +|+|||+|+.....    ...++.++.+++|+.++..+++++    .+.+ .++|++||...+-..              
T Consensus        92 ~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~----~~~~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~  162 (372)
T 3slg_A           92 CDVILPLVAIATPA----TYVKQPLRVFELDFEANLPIVRSA----VKYG-KHLVFPSTSEVYGMCADEQFDPDASALTY  162 (372)
T ss_dssp             CSEEEECBCCCCHH----HHHHCHHHHHHHHTTTTHHHHHHH----HHHT-CEEEEECCGGGGBSCCCSSBCTTTCCEEE
T ss_pred             CCEEEEcCccccHH----HHhhCHHHHHHHHHHHHHHHHHHH----HHhC-CcEEEeCcHHHhCCCCCCCCCcccccccc
Confidence            89999999975332    123456788899999999999888    4444 799999996543211              


Q ss_pred             ----CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCC-----CCchHHHHhhhhcCCCC----
Q 024994          145 ----PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEG-----PEGSEFLDGIARQTPIG----  211 (259)
Q Consensus       145 ----~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-----~~~~~~~~~~~~~~~~~----  211 (259)
                          .+...|+.+|.+.+.+++.++.+    |++++.++|+.++++........     .....+...+....+..    
T Consensus       163 ~p~~~p~~~Y~~sK~~~E~~~~~~~~~----g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (372)
T 3slg_A          163 GPINKPRWIYACSKQLMDRVIWGYGME----GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDG  238 (372)
T ss_dssp             CCTTCTTHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGG
T ss_pred             CCCCCCCCcHHHHHHHHHHHHHHHHHC----CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCC
Confidence                23347999999999999998654    89999999999999876532110     01112333333332221    


Q ss_pred             -----CCCCHHHHHHHHHHHhCCCCCCccccEEEeCC-Cceeee
Q 024994          212 -----RAGEPDEVSSLVAFLCLPAASYITGQIICVDG-GVTVTV  249 (259)
Q Consensus       212 -----~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dg-G~~~~~  249 (259)
                           .+..++|++++++.++........|+++++.+ |..+++
T Consensus       239 g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~~s~  282 (372)
T 3slg_A          239 GSQKRAFTYVDDGISALMKIIENSNGVATGKIYNIGNPNNNFSV  282 (372)
T ss_dssp             GCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTCEEEH
T ss_pred             CceEEEEEEHHHHHHHHHHHHhcccCcCCCceEEeCCCCCCccH
Confidence                 25578999999999997554446899999999 566654

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.91  E-value=4.9e-24  Score=180.50  Aligned_cols=211  Identities=16%  Similarity=0.129  Sum_probs=130.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+|+||++++++|+++|++|++++|+.+.           . +  ++.+|++|.+++.++++..      ++|
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----------~-~--~~~~Dl~d~~~~~~~~~~~------~~d   62 (315)
T 2ydy_A            3 RRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-----------P-K--FEQVNLLDSNAVHHIIHDF------QPH   62 (315)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEC--------------------------------CHHHHHHH------CCS
T ss_pred             CeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-----------C-C--eEEecCCCHHHHHHHHHhh------CCC
Confidence            689999999999999999999999999999987543           1 2  6789999999988888753      699


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCC----------CCCChhh
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG----------IPSVSLY  150 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~----------~~~~~~Y  150 (259)
                      +|||+||.....    .+.+++++.+++|+.++..+++++.+    .+ .++|++||...+.+          ..+...|
T Consensus        63 ~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~v~~SS~~v~~~~~~~~~E~~~~~~~~~Y  133 (315)
T 2ydy_A           63 VIVHCAAERRPD----VVENQPDAASQLNVDASGNLAKEAAA----VG-AFLIYISSDYVFDGTNPPYREEDIPAPLNLY  133 (315)
T ss_dssp             EEEECC-----------------------CHHHHHHHHHHHH----HT-CEEEEEEEGGGSCSSSCSBCTTSCCCCCSHH
T ss_pred             EEEECCcccChh----hhhcCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEchHHHcCCCCCCCCCCCCCCCcCHH
Confidence            999999975322    24567889999999999999999854    23 59999999876543          3456789


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhh-hc-------CCCCCCCCHHHHHHH
Q 024994          151 GAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIA-RQ-------TPIGRAGEPDEVSSL  222 (259)
Q Consensus       151 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~-~~-------~~~~~~~~~~~va~~  222 (259)
                      +.+|++.+.+++.++       +++..++|+.+.++...... . .......... ..       .+...+..++|++++
T Consensus       134 ~~sK~~~e~~~~~~~-------~~~~~lR~~~v~G~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a  204 (315)
T 2ydy_A          134 GKTKLDGEKAVLENN-------LGAAVLRIPILYGEVEKLEE-S-AVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATV  204 (315)
T ss_dssp             HHHHHHHHHHHHHHC-------TTCEEEEECSEECSCSSGGG-S-TTGGGHHHHHCCSSCEEEECSSBBCCEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHhC-------CCeEEEeeeeeeCCCCcccc-c-HHHHHHHHHHhcCCCeeeccCceECcEEHHHHHHH
Confidence            999999999998873       34567888888876543110 0 0111222222 11       123456789999999


Q ss_pred             HHHHhCCC-CCCccccEEEeCCCceeee
Q 024994          223 VAFLCLPA-ASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       223 ~~~l~~~~-~~~~~G~~l~~dgG~~~~~  249 (259)
                      +++++... .....|+.+++++|..+++
T Consensus       205 ~~~~~~~~~~~~~~~~~~~i~~~~~~s~  232 (315)
T 2ydy_A          205 CRQLAEKRMLDPSIKGTFHWSGNEQMTK  232 (315)
T ss_dssp             HHHHHHHHHTCTTCCEEEECCCSCCBCH
T ss_pred             HHHHHHhhccccCCCCeEEEcCCCcccH
Confidence            99988642 1235789999999977654

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.91  E-value=8.8e-24  Score=170.33  Aligned_cols=200  Identities=16%  Similarity=0.068  Sum_probs=143.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+|+||++++++|+++|++|++++|+.++.+.+.      ..++.++.+|++|.++  +       .+ +++|
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~------~~~~~~~~~D~~d~~~--~-------~~-~~~d   64 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL------GATVATLVKEPLVLTE--A-------DL-DSVD   64 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT------CTTSEEEECCGGGCCH--H-------HH-TTCS
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc------CCCceEEecccccccH--h-------hc-ccCC
Confidence            68999999999999999999999999999999988765432      3478899999999877  2       22 5799


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCC--------------
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPS--------------  146 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~--------------  146 (259)
                      +||||||......           ..++|+.++..++++    +.+.+ +++|++||.++..+.+.              
T Consensus        65 ~vi~~ag~~~~~~-----------~~~~n~~~~~~l~~a----~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~  128 (224)
T 3h2s_A           65 AVVDALSVPWGSG-----------RGYLHLDFATHLVSL----LRNSD-TLAVFILGSASLAMPGADHPMILDFPESAAS  128 (224)
T ss_dssp             EEEECCCCCTTSS-----------CTHHHHHHHHHHHHT----CTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGG
T ss_pred             EEEECCccCCCcc-----------hhhHHHHHHHHHHHH----HHHcC-CcEEEEecceeeccCCCCccccccCCCCCcc
Confidence            9999999852111           124677776666554    46666 99999999876654433              


Q ss_pred             ChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHH
Q 024994          147 VSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFL  226 (259)
Q Consensus       147 ~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  226 (259)
                      ...|+.+|++.+.+ +.+   ....+++++.++||++.++.......  .   ....+........+.+++|++++++++
T Consensus       129 ~~~y~~sK~~~e~~-~~~---~~~~~i~~~ivrp~~v~g~~~~~~~~--~---~~~~~~~~~~~~~~i~~~DvA~~~~~~  199 (224)
T 3h2s_A          129 QPWYDGALYQYYEY-QFL---QMNANVNWIGISPSEAFPSGPATSYV--A---GKDTLLVGEDGQSHITTGNMALAILDQ  199 (224)
T ss_dssp             STTHHHHHHHHHHH-HHH---TTCTTSCEEEEEECSBCCCCCCCCEE--E---ESSBCCCCTTSCCBCCHHHHHHHHHHH
T ss_pred             chhhHHHHHHHHHH-HHH---HhcCCCcEEEEcCccccCCCcccCce--e---cccccccCCCCCceEeHHHHHHHHHHH
Confidence            67899999999854 222   24569999999999999883221100  0   000000011123467899999999999


Q ss_pred             hCCCCCCccccEEEeCC
Q 024994          227 CLPAASYITGQIICVDG  243 (259)
Q Consensus       227 ~~~~~~~~~G~~l~~dg  243 (259)
                      +...  ...|+++++.+
T Consensus       200 l~~~--~~~g~~~~~~~  214 (224)
T 3h2s_A          200 LEHP--TAIRDRIVVRD  214 (224)
T ss_dssp             HHSC--CCTTSEEEEEE
T ss_pred             hcCc--cccCCEEEEec
Confidence            9653  35788888754

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.91  E-value=2.9e-24  Score=177.97  Aligned_cols=193  Identities=18%  Similarity=0.180  Sum_probs=147.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+|+||++++++|+++|++|++++|+.....         ..++.++.+|++|.+++.++++        .+|
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~--------~~d   65 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA---------EAHEEIVACDLADAQAVHDLVK--------DCD   65 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC---------CTTEEECCCCTTCHHHHHHHHT--------TCS
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc---------CCCccEEEccCCCHHHHHHHHc--------CCC
Confidence            58999999999999999999999999999999875321         1357888999999988887764        699


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCC------------CCh
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIP------------SVS  148 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~------------~~~  148 (259)
                      +||||||...        .+++++.+++|+.++..+++++.    +.+.++||++||...+.+.+            +..
T Consensus        66 ~vi~~a~~~~--------~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~  133 (267)
T 3ay3_A           66 GIIHLGGVSV--------ERPWNDILQANIIGAYNLYEAAR----NLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDS  133 (267)
T ss_dssp             EEEECCSCCS--------CCCHHHHHHHTHHHHHHHHHHHH----HTTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCS
T ss_pred             EEEECCcCCC--------CCCHHHHHHHHHHHHHHHHHHHH----HhCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCC
Confidence            9999999751        23467889999999999999884    44568999999987654322            357


Q ss_pred             hhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCcee-CCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHh
Q 024994          149 LYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIK-TSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLC  227 (259)
Q Consensus       149 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  227 (259)
                      .|+.+|++++.+++.++.   +.|++++.++||++. ++.        ...    ..      ..+.+++|+++++..++
T Consensus       134 ~Y~~sK~~~e~~~~~~~~---~~gi~~~~lrp~~v~~~~~--------~~~----~~------~~~~~~~dva~~~~~~~  192 (267)
T 3ay3_A          134 LYGLSKCFGEDLASLYYH---KFDIETLNIRIGSCFPKPK--------DAR----MM------ATWLSVDDFMRLMKRAF  192 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHH---TTCCCEEEEEECBCSSSCC--------SHH----HH------HHBCCHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHH---HcCCCEEEEeceeecCCCC--------CCC----ee------eccccHHHHHHHHHHHH
Confidence            899999999999998864   358999999999985 321        111    11      12457999999999888


Q ss_pred             CCCCCCccccEEEeCCCc
Q 024994          228 LPAASYITGQIICVDGGV  245 (259)
Q Consensus       228 ~~~~~~~~G~~l~~dgG~  245 (259)
                      ....  ..+.++++.++.
T Consensus       193 ~~~~--~~~~~~~~~~~~  208 (267)
T 3ay3_A          193 VAPK--LGCTVVYGASAN  208 (267)
T ss_dssp             HSSC--CCEEEEEECCSC
T ss_pred             hCCC--CCceeEecCCCc
Confidence            6432  223555555543

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.91  E-value=2.1e-24  Score=221.86  Aligned_cols=176  Identities=23%  Similarity=0.267  Sum_probs=141.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCE-EEEeeCChhHH---HHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAI-VHTCSRNQIEL---DARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ   76 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~-V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (259)
                      |++|||||++|||+++|++|+++|++ |++++|+..+.   ++..+++...+.++.++.+|++|.++++++++++.+ + 
T Consensus      1885 k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~-~- 1962 (2512)
T 2vz8_A         1885 KSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQ-L- 1962 (2512)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHH-H-
T ss_pred             CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHh-c-
Confidence            68999999999999999999999996 88899986433   445566666677899999999999999999999874 6 


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHH
Q 024994           77 GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGA  156 (259)
Q Consensus        77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  156 (259)
                      +++|+||||||+....++.+++.++|++++++|+.|++++.+++.+.|.+.  ++||++||.++..+.+++..|+++|++
T Consensus      1963 g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~--g~iV~iSS~ag~~g~~g~~~Y~aaKaa 2040 (2512)
T 2vz8_A         1963 GPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPEL--DYFVIFSSVSCGRGNAGQANYGFANSA 2040 (2512)
T ss_dssp             SCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTC--CEEEEECCHHHHTTCTTCHHHHHHHHH
T ss_pred             CCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccC--CEEEEecchhhcCCCCCcHHHHHHHHH
Confidence            699999999999877788999999999999999999999999999888653  899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCceEEEEeCCcee
Q 024994          157 MNQLTKNLACEWAKDNIRTNTVAPWVIK  184 (259)
Q Consensus       157 ~~~~~~~~a~e~~~~gi~v~~v~pg~v~  184 (259)
                      +++|++..+.+    |++..++..|.+.
T Consensus      2041 l~~l~~~rr~~----Gl~~~a~~~g~~~ 2064 (2512)
T 2vz8_A         2041 MERICEKRRHD----GLPGLAVQWGAIG 2064 (2512)
T ss_dssp             HHHHHHHHHHT----TSCCCEEEECCBC
T ss_pred             HHHHHHHHHHC----CCcEEEEEccCcC
Confidence            99999987654    8888888888764

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.91  E-value=3.2e-24  Score=184.82  Aligned_cols=221  Identities=12%  Similarity=0.095  Sum_probs=158.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCC-CEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||+|+||.+++++|+++| ++|++++|+.....  ...+.    .+. +.+|++|.+.++++++.  ..+ +++
T Consensus        47 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~----~~~-~~~d~~~~~~~~~~~~~--~~~-~~~  116 (357)
T 2x6t_A           47 RMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV----DLN-IADYMDKEDFLIQIMAG--EEF-GDV  116 (357)
T ss_dssp             -CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGTT----TSC-CSEEEEHHHHHHHHHTT--CCC-SSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhccc----Cce-EeeecCcHHHHHHHHhh--ccc-CCC
Confidence            579999999999999999999999 99999999765421  01111    122 67899998888777652  112 479


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCC-----------CCh
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIP-----------SVS  148 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~-----------~~~  148 (259)
                      |+|||+|+....      +.+++++.+++|+.++..+++++.+    .+. +||++||...+.+.+           +..
T Consensus       117 d~Vih~A~~~~~------~~~~~~~~~~~n~~~~~~ll~a~~~----~~~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~~  185 (357)
T 2x6t_A          117 EAIFHEGACSST------TEWDGKYMMDNNYQYSKELLHYCLE----REI-PFLYASSAATYGGRTSDFIESREYEKPLN  185 (357)
T ss_dssp             CEEEECCSCCCT------TCCCHHHHHHHTHHHHHHHHHHHHH----HTC-CEEEEEEGGGGCSCSSCCCSSGGGCCCSS
T ss_pred             CEEEECCcccCC------ccCCHHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEcchHHhCCCCCCCcCCcCCCCCCC
Confidence            999999997543      2234678899999999999999854    344 999999986543322           256


Q ss_pred             hhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcC-CCCchHHHHhhhhcCC----------CCCCCCHH
Q 024994          149 LYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE-GPEGSEFLDGIARQTP----------IGRAGEPD  217 (259)
Q Consensus       149 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~----------~~~~~~~~  217 (259)
                      .|+.+|.+.+.+++.++.++   |++++.++|+.+.++....... ......+...+....+          ...+..++
T Consensus       186 ~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  262 (357)
T 2x6t_A          186 VFGYSKFLFDEYVRQILPEA---NSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVG  262 (357)
T ss_dssp             HHHHHHHHHHHHHHHHGGGC---SSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHH
T ss_pred             hhHHHHHHHHHHHHHHHHHc---CCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHH
Confidence            89999999999999987653   8999999999999886532100 0111112222222221          22356789


Q ss_pred             HHHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          218 EVSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       218 ~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      |+++++++++....    |+++++++|..+++
T Consensus       263 Dva~ai~~~~~~~~----~~~~~i~~~~~~s~  290 (357)
T 2x6t_A          263 DVADVNLWFLENGV----SGIFNLGTGRAESF  290 (357)
T ss_dssp             HHHHHHHHHHHHCC----CEEEEESCSCCEEH
T ss_pred             HHHHHHHHHHhcCC----CCeEEecCCCcccH
Confidence            99999999986442    88999999876654

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.91  E-value=9.2e-24  Score=176.97  Aligned_cols=196  Identities=19%  Similarity=0.118  Sum_probs=149.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+|+||++++++|+++|++|++++|+                     .+|++|.+++.++++..      ++|
T Consensus        13 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------------------~~Dl~d~~~~~~~~~~~------~~d   65 (292)
T 1vl0_A           13 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQ---------------------DLDITNVLAVNKFFNEK------KPN   65 (292)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT---------------------TCCTTCHHHHHHHHHHH------CCS
T ss_pred             ceEEEECCCChHHHHHHHHHHhCCCeEEeccCc---------------------cCCCCCHHHHHHHHHhc------CCC
Confidence            589999999999999999999999999999996                     37999999988888653      699


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCC-----------CChh
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIP-----------SVSL  149 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~-----------~~~~  149 (259)
                      +|||+||....    +.+.+++++.+++|+.++..+++++.+    .+. ++|++||.+.+.+.+           +...
T Consensus        66 ~vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~----~~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~  136 (292)
T 1vl0_A           66 VVINCAAHTAV----DKCEEQYDLAYKINAIGPKNLAAAAYS----VGA-EIVQISTDYVFDGEAKEPITEFDEVNPQSA  136 (292)
T ss_dssp             EEEECCCCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHH----HTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSH
T ss_pred             EEEECCccCCH----HHHhcCHHHHHHHHHHHHHHHHHHHHH----cCC-eEEEechHHeECCCCCCCCCCCCCCCCccH
Confidence            99999996432    123467889999999999999999854    333 999999976543322           3578


Q ss_pred             hhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCC-------CCCCCCHHHHHHH
Q 024994          150 YGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTP-------IGRAGEPDEVSSL  222 (259)
Q Consensus       150 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~va~~  222 (259)
                      |+.+|++.+.+++.++       .+++.++|+.+.++ ...+     ............+       ...+..++|++++
T Consensus       137 Y~~sK~~~E~~~~~~~-------~~~~~lR~~~v~G~-~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~  203 (292)
T 1vl0_A          137 YGKTKLEGENFVKALN-------PKYYIVRTAWLYGD-GNNF-----VKTMINLGKTHDELKVVHDQVGTPTSTVDLARV  203 (292)
T ss_dssp             HHHHHHHHHHHHHHHC-------SSEEEEEECSEESS-SSCH-----HHHHHHHHHHCSEEEEESSCEECCEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhC-------CCeEEEeeeeeeCC-CcCh-----HHHHHHHHhcCCcEEeecCeeeCCccHHHHHHH
Confidence            9999999999998863       25789999999977 2211     1112222222221       2346679999999


Q ss_pred             HHHHhCCCCCCccccEEEeCCCceeee
Q 024994          223 VAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       223 ~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      ++++++..    .|+.+++++|..+++
T Consensus       204 ~~~~~~~~----~~~~~~i~~~~~~s~  226 (292)
T 1vl0_A          204 VLKVIDEK----NYGTFHCTCKGICSW  226 (292)
T ss_dssp             HHHHHHHT----CCEEEECCCBSCEEH
T ss_pred             HHHHHhcC----CCcEEEecCCCCccH
Confidence            99998753    689999999876654

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.90  E-value=4.5e-23  Score=165.64  Aligned_cols=204  Identities=12%  Similarity=0.054  Sum_probs=136.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+|+||++++++|+++|++|++++|+.++.+.+.       .++.++.+|++|.++  +       .+ .++|
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-------~~~~~~~~D~~d~~~--~-------~~-~~~d   63 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-------KDINILQKDIFDLTL--S-------DL-SDQN   63 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-------SSSEEEECCGGGCCH--H-------HH-TTCS
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-------CCCeEEeccccChhh--h-------hh-cCCC
Confidence            68999999999999999999999999999999987765432       468899999999877  2       22 5799


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCC------------CCh
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIP------------SVS  148 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~------------~~~  148 (259)
                      +|||+||....             ..+.|+.++..+++++    ++.+.+++|++||..+..+.+            +..
T Consensus        64 ~vi~~ag~~~~-------------~~~~~~~~~~~l~~a~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~  126 (221)
T 3ew7_A           64 VVVDAYGISPD-------------EAEKHVTSLDHLISVL----NGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAP  126 (221)
T ss_dssp             EEEECCCSSTT-------------TTTSHHHHHHHHHHHH----CSCCSSEEEEECCCC-------------------CC
T ss_pred             EEEECCcCCcc-------------ccchHHHHHHHHHHHH----HhcCCceEEEEecceEEEcCCCCccccccCCCCCHH
Confidence            99999997421             1234666666665554    666678999999988765443            245


Q ss_pred             hhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhC
Q 024994          149 LYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCL  228 (259)
Q Consensus       149 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  228 (259)
                      .|+.+|.+.+.+ +.+..  ...|++++.++||++.++.........    ....+........+.+++|++++++.++.
T Consensus       127 ~y~~~k~~~e~~-~~~~~--~~~gi~~~ivrp~~v~g~~~~~~~~~~----~~~~~~~~~~~~~~i~~~Dva~~~~~~l~  199 (221)
T 3ew7_A          127 YYPTARAQAKQL-EHLKS--HQAEFSWTYISPSAMFEPGERTGDYQI----GKDHLLFGSDGNSFISMEDYAIAVLDEIE  199 (221)
T ss_dssp             CSCCHHHHHHHH-HHHHT--TTTTSCEEEEECSSCCCCC-------------------------CCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH-HHHHh--hccCccEEEEeCcceecCCCccCceEe----ccccceecCCCCceEeHHHHHHHHHHHHh
Confidence            699999999886 32321  156899999999999987221110000    00011111112346789999999999996


Q ss_pred             CCCCCccccEEEeCCCcee
Q 024994          229 PAASYITGQIICVDGGVTV  247 (259)
Q Consensus       229 ~~~~~~~G~~l~~dgG~~~  247 (259)
                      ..  ...|+.+++.+-...
T Consensus       200 ~~--~~~g~~~~~~~~~~~  216 (221)
T 3ew7_A          200 RP--NHLNEHFTVAGKLEH  216 (221)
T ss_dssp             SC--SCTTSEEECCC----
T ss_pred             Cc--cccCCEEEECCCCcc
Confidence            43  357899999876554

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.90  E-value=3.1e-23  Score=175.20  Aligned_cols=221  Identities=17%  Similarity=0.134  Sum_probs=159.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHC--CCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARF--GAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||+|+||.+++++|+++  |++|++++|+....+ .    ..   ++.++.+|++|.+++++++++.      +
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~----~~---~~~~~~~D~~d~~~~~~~~~~~------~   68 (312)
T 2yy7_A            3 PKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-V----VN---SGPFEVVNALDFNQIEHLVEVH------K   68 (312)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-H----HH---SSCEEECCTTCHHHHHHHHHHT------T
T ss_pred             ceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-c----cC---CCceEEecCCCHHHHHHHHhhc------C
Confidence            57999999999999999999999  899999999866522 1    11   4568899999999988887642      6


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCC------------CC
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI------------PS  146 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~------------~~  146 (259)
                      +|+|||+|+....     ...+++++.+++|+.++..+++++    .+.+.+++|++||...+.+.            .+
T Consensus        69 ~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~  139 (312)
T 2yy7_A           69 ITDIYLMAALLSA-----TAEKNPAFAWDLNMNSLFHVLNLA----KAKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEP  139 (312)
T ss_dssp             CCEEEECCCCCHH-----HHHHCHHHHHHHHHHHHHHHHHHH----HTTSCSEEECCEEGGGCCTTSCSSSBCSSCBCCC
T ss_pred             CCEEEECCccCCC-----chhhChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEeccHHHhCCCCCCCCccccCcCCC
Confidence            9999999996422     123567889999999999999988    44556799999997654321            23


Q ss_pred             ChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCC--chHHHHhhhhcC-C-C------CCCCCH
Q 024994          147 VSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPE--GSEFLDGIARQT-P-I------GRAGEP  216 (259)
Q Consensus       147 ~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~--~~~~~~~~~~~~-~-~------~~~~~~  216 (259)
                      ...|+.+|.+.+.+++.++.++   |++++.++|+.+.++..........  ...+........ + .      ..+..+
T Consensus       140 ~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  216 (312)
T 2yy7_A          140 STVYGISKQAGERWCEYYHNIY---GVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYM  216 (312)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHH---CCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEH
T ss_pred             CchhHHHHHHHHHHHHHHHHhc---CCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeH
Confidence            5789999999999999998776   8999999999999875432111001  011112121111 0 1      113467


Q ss_pred             HHHHHHHHHHhCCCCCCc-cccEEEeCCCceee
Q 024994          217 DEVSSLVAFLCLPAASYI-TGQIICVDGGVTVT  248 (259)
Q Consensus       217 ~~va~~~~~l~~~~~~~~-~G~~l~~dgG~~~~  248 (259)
                      +|++++++.++....... .|+++++.+ ..++
T Consensus       217 ~Dva~a~~~~~~~~~~~~~~~~~~ni~~-~~~s  248 (312)
T 2yy7_A          217 DDAIDATINIMKAPVEKIKIHSSYNLAA-MSFT  248 (312)
T ss_dssp             HHHHHHHHHHHHSCGGGCCCSSCEECCS-EEEC
T ss_pred             HHHHHHHHHHHhCcccccccCceEEeCC-CccC
Confidence            999999998886443222 258899975 5444

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.90  E-value=7.8e-24  Score=180.25  Aligned_cols=233  Identities=17%  Similarity=0.087  Sum_probs=169.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHH-HCCCEEEEeeCChhH------------HHHHHHHHHhcCCcEEEEEecCCCHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELA-RFGAIVHTCSRNQIE------------LDARLHEWKNKGFKVTGSVCDLSSREQREKL   67 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~-~~G~~V~~~~r~~~~------------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   67 (259)
                      |++||||||+|||++++..|+ +.|+.|+++.+..+.            .....++++..+.+...+.+|+++.++++++
T Consensus        51 K~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~~v  130 (401)
T 4ggo_A           51 KNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKAQV  130 (401)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHH
T ss_pred             CEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHHHH
Confidence            799999999999999999998 689999999875432            3345566667788999999999999999999


Q ss_pred             HHHHHHHcCCCccEEEEcCCCCCCC-------------C---------------------CCCCCHHHHH---HHHHHhh
Q 024994           68 IETVTSIFQGKLNILINNAAIAFVK-------------P---------------------TVDITAEDMS---TVSSTNF  110 (259)
Q Consensus        68 ~~~~~~~~~~~id~vi~~ag~~~~~-------------~---------------------~~~~~~~~~~---~~~~~n~  110 (259)
                      ++++.+.+ |++|+|||+++.....             |                     +...+.++++   +.|....
T Consensus       131 i~~i~~~~-G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vMg~s~  209 (401)
T 4ggo_A          131 IEEAKKKG-IKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVMGGED  209 (401)
T ss_dssp             HHHHHHTT-CCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHHSSHH
T ss_pred             HHHHHHhc-CCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHHhhhH
Confidence            99999999 7999999999975210             1                     1123455555   4555567


Q ss_pred             HhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCC--CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCC
Q 024994          111 ESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIP--SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI  188 (259)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~--~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~  188 (259)
                      ++.+...+...+.|.+  +++++.+|+.+...-.|  .+..++++|++|+..++.|+.+++  +++++.+.|+.+.|...
T Consensus       210 ~s~w~~al~~a~lla~--G~siva~SYiGse~t~P~Y~~G~mG~AKaaLEa~~r~La~eL~--~~~a~v~v~~a~vT~As  285 (401)
T 4ggo_A          210 WERWIKQLSKEGLLEE--GCITLAYSYIGPEATQALYRKGTIGKAKEHLEATAHRLNKENP--SIRAFVSVNKGLVTRAS  285 (401)
T ss_dssp             HHHHHHHHHHTTCEEE--EEEEEEEECCCCGGGHHHHTTSHHHHHHHHHHHHHHHHHHHCT--TEEEEEEECCCCCCTTG
T ss_pred             HHHHHHHHHhhhcccC--CceEEEEeccCcceeecCCCccHHHHHHHHHHHHHHHHHHhcC--CCcEEEEEcCccccchh
Confidence            7777777777777743  58999999988765444  456899999999999999999987  48999999999999987


Q ss_pred             CCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCC
Q 024994          189 KPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVDGG  244 (259)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG  244 (259)
                      ...+..+-   . -.+..+. ++..+.-|.+.+-+..|..+. -|-++..+.+|..
T Consensus       286 saIP~~pl---y-~~~l~kv-mk~~g~heg~ieq~~rl~~~~-ly~~~~~~~~D~~  335 (401)
T 4ggo_A          286 AVIPVIPL---Y-LASLFKV-MKEKGNHEGCIEQITRLYAER-LYRKDGTIPVDEE  335 (401)
T ss_dssp             GGSSSHHH---H-HHHHHHH-HHHHTCCCCHHHHHHHHHHHT-TSCTTCCCCCCTT
T ss_pred             hcCCCchH---H-HHHHHHH-HHhcCCCCchHHHHHHHHHHh-hccCCCCCCcCCC
Confidence            66543221   1 1111111 233344566767676666532 2333334556754

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.90  E-value=5e-23  Score=176.24  Aligned_cols=226  Identities=17%  Similarity=0.117  Sum_probs=154.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCC-------CEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFG-------AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTS   73 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   73 (259)
                      |++|||||+|+||.+++++|+++|       ++|++++|+.+....      ....++.++.+|++|.++++++++    
T Consensus        15 ~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~------~~~~~~~~~~~Dl~d~~~~~~~~~----   84 (342)
T 2hrz_A           15 MHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA------GFSGAVDARAADLSAPGEAEKLVE----   84 (342)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT------TCCSEEEEEECCTTSTTHHHHHHH----
T ss_pred             CEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc------ccCCceeEEEcCCCCHHHHHHHHh----
Confidence            579999999999999999999999       899999997653321      124578899999999998888775    


Q ss_pred             HcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC-CCCEEEEecCCCccCCC-C------
Q 024994           74 IFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVGGVRGI-P------  145 (259)
Q Consensus        74 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~isS~~~~~~~-~------  145 (259)
                         +++|+|||+||....     .+.+++++.+++|+.++..+++++.+...+. ..++||++||...+.+. +      
T Consensus        85 ---~~~d~vih~A~~~~~-----~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~  156 (342)
T 2hrz_A           85 ---ARPDVIFHLAAIVSG-----EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDE  156 (342)
T ss_dssp             ---TCCSEEEECCCCCHH-----HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTT
T ss_pred             ---cCCCEEEECCccCcc-----cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCC
Confidence               379999999996431     2356788999999999999999986643221 14799999998665432 1      


Q ss_pred             ----CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeC-CCCCCCcCCCCchHHHHhhhhcC----CCCC----
Q 024994          146 ----SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKT-SMIKPFEEGPEGSEFLDGIARQT----PIGR----  212 (259)
Q Consensus       146 ----~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t-~~~~~~~~~~~~~~~~~~~~~~~----~~~~----  212 (259)
                          +...|+.+|++.+.+++.++.++   +++...++|..+.. |......................    +.+.    
T Consensus       157 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (342)
T 2hrz_A          157 FHTTPLTSYGTQKAICELLLSDYSRRG---FFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRH  233 (342)
T ss_dssp             CCCCCSSHHHHHHHHHHHHHHHHHHTT---SCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEE
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHhc---CCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccce
Confidence                56789999999999999987653   55555555554443 22110000000011122222221    2221    


Q ss_pred             -CCCHHHHHHHHHHHhCCCCC-CccccEEEeCCCceee
Q 024994          213 -AGEPDEVSSLVAFLCLPAAS-YITGQIICVDGGVTVT  248 (259)
Q Consensus       213 -~~~~~~va~~~~~l~~~~~~-~~~G~~l~~dgG~~~~  248 (259)
                       +.+++|++++++.++..... ...++++++. |..++
T Consensus       234 ~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~-g~~~s  270 (342)
T 2hrz_A          234 WHASPRSAVGFLIHGAMIDVEKVGPRRNLSMP-GLSAT  270 (342)
T ss_dssp             EEECHHHHHHHHHHHHHSCHHHHCSCCEEECC-CEEEE
T ss_pred             eeEehHHHHHHHHHHHhccccccCCccEEEcC-CCCCC
Confidence             35789999999888853211 1146789984 55444

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.90  E-value=7.1e-23  Score=189.95  Aligned_cols=224  Identities=14%  Similarity=0.088  Sum_probs=163.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHC-CCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHH-HHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARF-GAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQ-REKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~~~~   78 (259)
                      |++|||||+|+||.+++++|+++ |++|++++|+.+..+...     ...++.++.+|++|.++ ++++++        +
T Consensus       316 ~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~-----~~~~v~~v~~Dl~d~~~~~~~~~~--------~  382 (660)
T 1z7e_A          316 TRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHVK--------K  382 (660)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGT-----TCTTEEEEECCTTTCHHHHHHHHH--------H
T ss_pred             ceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhc-----cCCceEEEECCCCCcHHHHHHhhc--------C
Confidence            57999999999999999999998 899999999876543221     13478899999998754 554543        5


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCC--------------
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI--------------  144 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~--------------  144 (259)
                      +|+|||+|+.....    ...+++++.+++|+.++..+++++.    +.+ +++|++||...+.+.              
T Consensus       383 ~D~Vih~Aa~~~~~----~~~~~~~~~~~~Nv~gt~~ll~aa~----~~~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~~  453 (660)
T 1z7e_A          383 CDVVLPLVAIATPI----EYTRNPLRVFELDFEENLRIIRYCV----KYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIV  453 (660)
T ss_dssp             CSEEEECCCCCCTH----HHHHSHHHHHHHHTHHHHHHHHHHH----HTT-CEEEEECCGGGGBTCCSSSBCTTTCCEEE
T ss_pred             CCEEEECceecCcc----ccccCHHHHHHhhhHHHHHHHHHHH----HhC-CEEEEEecHHHcCCCCCcccCCCcccccc
Confidence            89999999975321    1234667899999999999998884    444 899999997654221              


Q ss_pred             ----CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCc-----CCCCchHHHHhhhhcCCC-----
Q 024994          145 ----PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE-----EGPEGSEFLDGIARQTPI-----  210 (259)
Q Consensus       145 ----~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~-----~~~~~~~~~~~~~~~~~~-----  210 (259)
                          .+...|+.||.+.+.+++.++.++   |++++.++||++.++......     .......+...+....+.     
T Consensus       454 ~p~~~p~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~  530 (660)
T 1z7e_A          454 GPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDG  530 (660)
T ss_dssp             CCTTCTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGG
T ss_pred             CcccCCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCC
Confidence                123379999999999999998776   899999999999998753210     011111233333333332     


Q ss_pred             ----CCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCc-eeee
Q 024994          211 ----GRAGEPDEVSSLVAFLCLPAASYITGQIICVDGGV-TVTV  249 (259)
Q Consensus       211 ----~~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~-~~~~  249 (259)
                          ..+.+++|+++++++++........|+++++++|. .+++
T Consensus       531 g~~~~~~i~v~Dva~ai~~~l~~~~~~~~g~~~ni~~~~~~~s~  574 (660)
T 1z7e_A          531 GKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASI  574 (660)
T ss_dssp             GCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCGGGEEEH
T ss_pred             CCeEEEEEEHHHHHHHHHHHHhCccccCCCeEEEECCCCCCcCH
Confidence                12556899999999998754445689999999985 5543

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.90  E-value=2.7e-24  Score=183.83  Aligned_cols=219  Identities=18%  Similarity=0.111  Sum_probs=145.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHH--HHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDA--RLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||+|+||++++++|+++|++|+++.|+.+....  ....+. ...++.++++|++|.++++++++        .
T Consensus        10 ~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~--------~   80 (338)
T 2rh8_A           10 KTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ-ELGDLKIFRADLTDELSFEAPIA--------G   80 (338)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG-GGSCEEEEECCTTTSSSSHHHHT--------T
T ss_pred             CEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC-CCCcEEEEecCCCChHHHHHHHc--------C
Confidence            689999999999999999999999999999987653221  112222 13468889999999888777663        5


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCC---------C-----
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG---------I-----  144 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~---------~-----  144 (259)
                      +|+|||+|+....   .  ..+..++.+++|+.++..+++++.+..   +.++||++||.++..+         .     
T Consensus        81 ~D~Vih~A~~~~~---~--~~~~~~~~~~~nv~gt~~ll~aa~~~~---~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~  152 (338)
T 2rh8_A           81 CDFVFHVATPVHF---A--SEDPENDMIKPAIQGVVNVMKACTRAK---SVKRVILTSSAAAVTINQLDGTGLVVDEKNW  152 (338)
T ss_dssp             CSEEEEESSCCCC--------------CHHHHHHHHHHHHHHHHCT---TCCEEEEECCHHHHHHHHHTCSCCCCCTTTT
T ss_pred             CCEEEEeCCccCC---C--CCCcHHHHHHHHHHHHHHHHHHHHHcC---CcCEEEEEecHHHeecCCcCCCCcccChhhc
Confidence            8999999985421   1  112224588999999999999885321   2579999999763211         0     


Q ss_pred             -------C---CChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhh--------
Q 024994          145 -------P---SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIAR--------  206 (259)
Q Consensus       145 -------~---~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~--------  206 (259)
                             +   ....|+.||.+.+.+++.++.++   |++++.++|+.+++|........ ...........        
T Consensus       153 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~~lrp~~v~Gp~~~~~~~~-~~~~~~~~~~g~~~~~~~~  228 (338)
T 2rh8_A          153 TDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEEN---NIDLITVIPTLMAGSSLTSDVPS-SIGLAMSLITGNEFLINGM  228 (338)
T ss_dssp             TCC-------CCCCCCTTSCCHHHHHHHHHHHHH---TCCEEEEEECEEESCCSSSSCCH-HHHHHHHHHHTCHHHHHHH
T ss_pred             cchhhccccCCccchHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCceECCCCCCCCCc-hHHHHHHHHcCCccccccc
Confidence                   0   11159999999999998887654   89999999999999976432110 00000000000        


Q ss_pred             -c--CCCC--CCCCHHHHHHHHHHHhCCCCCCccccEEEeCC
Q 024994          207 -Q--TPIG--RAGEPDEVSSLVAFLCLPAASYITGQIICVDG  243 (259)
Q Consensus       207 -~--~~~~--~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dg  243 (259)
                       .  .+.+  .+..++|++++++++++..  ...|. +++.+
T Consensus       229 ~~~~~~~~~~~~i~v~Dva~a~~~~~~~~--~~~~~-~~~~~  267 (338)
T 2rh8_A          229 KGMQMLSGSVSIAHVEDVCRAHIFVAEKE--SASGR-YICCA  267 (338)
T ss_dssp             HHHHHHHSSEEEEEHHHHHHHHHHHHHCT--TCCEE-EEECS
T ss_pred             cccccccCcccEEEHHHHHHHHHHHHcCC--CcCCc-EEEec
Confidence             0  0001  3678999999999988642  23555 45543

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.90  E-value=4.1e-23  Score=174.21  Aligned_cols=220  Identities=12%  Similarity=0.109  Sum_probs=154.0

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCC-CEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            2 TALVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      ++|||||+|+||++++++|+++| ++|++++|+.....  ...+..    +. +.+|++|.+.++++++...  + +++|
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~~----~~-~~~d~~~~~~~~~~~~~~~--~-~~~d   70 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLVD----LN-IADYMDKEDFLIQIMAGEE--F-GDVE   70 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHHT----SC-CSEEEEHHHHHHHHHTTCC--C-SSCC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcCc----ce-eccccccHHHHHHHHhccc--c-CCCc
Confidence            48999999999999999999999 89999999765421  111211    12 6789998888777664110  1 2699


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCC-----------CCChh
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI-----------PSVSL  149 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~-----------~~~~~  149 (259)
                      +|||+|+....      ..+++++.+++|+.++..+++++.+    .+. ++|++||...+.+.           .+...
T Consensus        71 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~a~~~----~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~  139 (310)
T 1eq2_A           71 AIFHEGACSST------TEWDGKYMMDNNYQYSKELLHYCLE----REI-PFLYASSAATYGGRTSDFIESREYEKPLNV  139 (310)
T ss_dssp             EEEECCSCCCT------TCCCHHHHHHHTHHHHHHHHHHHHH----HTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSH
T ss_pred             EEEECcccccC------cccCHHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCCh
Confidence            99999997533      2234677889999999999998843    345 99999997654221           23568


Q ss_pred             hhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcC-CCCchHHHHhhhhcCC----------CCCCCCHHH
Q 024994          150 YGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE-GPEGSEFLDGIARQTP----------IGRAGEPDE  218 (259)
Q Consensus       150 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~----------~~~~~~~~~  218 (259)
                      |+.+|.+.+.+++.++.+   .|++++.++||++.++....... ......+...+....+          ...+..++|
T Consensus       140 Y~~sK~~~e~~~~~~~~~---~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~D  216 (310)
T 1eq2_A          140 YGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGD  216 (310)
T ss_dssp             HHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHH
T ss_pred             hHHHHHHHHHHHHHHHHH---cCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHH
Confidence            999999999999998755   48999999999999987532100 0011112222222111          223456899


Q ss_pred             HHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          219 VSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       219 va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      ++++++.++....    |+++++.+|..+++
T Consensus       217 va~~~~~~~~~~~----~~~~~i~~~~~~s~  243 (310)
T 1eq2_A          217 VADVNLWFLENGV----SGIFNLGTGRAESF  243 (310)
T ss_dssp             HHHHHHHHHHHCC----CEEEEESCSCCBCH
T ss_pred             HHHHHHHHHhcCC----CCeEEEeCCCccCH
Confidence            9999999886432    78999999876654

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.89  E-value=9.5e-23  Score=174.70  Aligned_cols=218  Identities=12%  Similarity=0.062  Sum_probs=154.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+|+||.+++++|+++|++|++++|+..........+. ...++.++.+|+++..            + .++|
T Consensus        28 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------~-~~~d   93 (343)
T 2b69_A           28 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI-GHENFELINHDVVEPL------------Y-IEVD   93 (343)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGT-TCTTEEEEECCTTSCC------------C-CCCS
T ss_pred             CEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhc-cCCceEEEeCccCChh------------h-cCCC
Confidence            689999999999999999999999999999986532211111111 1346889999998742            3 4799


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccC----------------CC
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR----------------GI  144 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~----------------~~  144 (259)
                      +|||+|+.......    .+++++.+++|+.++..+++++..    .+ .++|++||...+-                +.
T Consensus        94 ~vih~A~~~~~~~~----~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~  164 (343)
T 2b69_A           94 QIYHLASPASPPNY----MYNPIKTLKTNTIGTLNMLGLAKR----VG-ARLLLASTSEVYGDPEVHPQSEDYWGHVNPI  164 (343)
T ss_dssp             EEEECCSCCSHHHH----TTCHHHHHHHHHHHHHHHHHHHHH----HT-CEEEEEEEGGGGBSCSSSSBCTTCCCBCCSS
T ss_pred             EEEECccccCchhh----hhCHHHHHHHHHHHHHHHHHHHHH----hC-CcEEEECcHHHhCCCCCCCCcccccccCCCC
Confidence            99999997532211    123567889999999999998843    33 4999999975431                23


Q ss_pred             CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCC---------CCCCC
Q 024994          145 PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPI---------GRAGE  215 (259)
Q Consensus       145 ~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~  215 (259)
                      .+...|+.+|++.+.+++.++.++   +++++.++|+.++++...... ......+........+.         ..+..
T Consensus       165 ~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  240 (343)
T 2b69_A          165 GPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRMHMND-GRVVSNFILQALQGEPLTVYGSGSQTRAFQY  240 (343)
T ss_dssp             STTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTC-CCHHHHHHHHHHHTCCEEEESSSCCEEECEE
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEEcceeCcCCCCCc-ccHHHHHHHHHHcCCCceEcCCCCeEEeeEe
Confidence            345689999999999999998776   899999999999998653211 11111222333222221         12557


Q ss_pred             HHHHHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          216 PDEVSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       216 ~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      ++|++++++.++...    .++.+++.+|..+++
T Consensus       241 v~Dva~a~~~~~~~~----~~~~~~i~~~~~~s~  270 (343)
T 2b69_A          241 VSDLVNGLVALMNSN----VSSPVNLGNPEEHTI  270 (343)
T ss_dssp             HHHHHHHHHHHHTSS----CCSCEEESCCCEEEH
T ss_pred             HHHHHHHHHHHHhcC----CCCeEEecCCCCCcH
Confidence            899999999888643    267899999876654

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.89  E-value=3.8e-22  Score=178.47  Aligned_cols=222  Identities=17%  Similarity=0.086  Sum_probs=156.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHC---CCEEEEeeCChhHHHHHHHHHHh----------------cCCcEEEEEecCC--
Q 024994            1 MTALVTGGTRGIGHATVEELARF---GAIVHTCSRNQIELDARLHEWKN----------------KGFKVTGSVCDLS--   59 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~---G~~V~~~~r~~~~~~~~~~~~~~----------------~~~~~~~~~~D~~--   59 (259)
                      |+||||||+|+||.+++++|+++   |++|++++|+.+...... .+.+                ...++.++.+|++  
T Consensus        74 ~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~~~  152 (478)
T 4dqv_A           74 RTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARR-RLEKTFDSGDPELLRHFKELAADRLEVVAGDKSEP  152 (478)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHH-HHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTTSG
T ss_pred             CEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHH-HHHHHHHhcchhhhhhhhhhccCceEEEEeECCCc
Confidence            68999999999999999999999   999999999876543221 1111                1358999999998  


Q ss_pred             ----CHHHHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEe
Q 024994           60 ----SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFI  135 (259)
Q Consensus        60 ----~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~i  135 (259)
                          |.+.++++++        ++|+|||||+....        +.+++.+++|+.++..+++++    .+.+.+++|++
T Consensus       153 ~~gld~~~~~~~~~--------~~D~Vih~Aa~~~~--------~~~~~~~~~Nv~gt~~ll~aa----~~~~~~~~V~i  212 (478)
T 4dqv_A          153 DLGLDQPMWRRLAE--------TVDLIVDSAAMVNA--------FPYHELFGPNVAGTAELIRIA----LTTKLKPFTYV  212 (478)
T ss_dssp             GGGCCHHHHHHHHH--------HCCEEEECCSSCSB--------SSCCEEHHHHHHHHHHHHHHH----TSSSCCCEEEE
T ss_pred             ccCCCHHHHHHHHc--------CCCEEEECccccCC--------cCHHHHHHHHHHHHHHHHHHH----HhCCCCeEEEE
Confidence                6666666654        58999999998643        223456789999999999987    44555799999


Q ss_pred             cCCCccCCCCC----------------------ChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCC-c
Q 024994          136 SSVGGVRGIPS----------------------VSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF-E  192 (259)
Q Consensus       136 sS~~~~~~~~~----------------------~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~-~  192 (259)
                      ||.+.+.....                      ...|+.||.+.+.+++.++.+.   |++++.++||+|.++....- .
T Consensus       213 SS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ivRpg~v~G~~~~~g~~  289 (478)
T 4dqv_A          213 STADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC---ALPVAVFRCGMILADTSYAGQL  289 (478)
T ss_dssp             EEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECCSSSSSCC
T ss_pred             eehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh---CCCeEEEECceeeCCCccCCcC
Confidence            99654322111                      1349999999999999998766   89999999999988743211 1


Q ss_pred             CCCC-chHHHHhhhh--cCCC---------------CCCCCHHHHHHHHHHHhCCC--CCCccccEEEeCCCce
Q 024994          193 EGPE-GSEFLDGIAR--QTPI---------------GRAGEPDEVSSLVAFLCLPA--ASYITGQIICVDGGVT  246 (259)
Q Consensus       193 ~~~~-~~~~~~~~~~--~~~~---------------~~~~~~~~va~~~~~l~~~~--~~~~~G~~l~~dgG~~  246 (259)
                      .... ..........  ..|.               -.+.+.+|++++++.++...  .....|+++++.++..
T Consensus       290 ~~~~~~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~  363 (478)
T 4dqv_A          290 NMSDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHD  363 (478)
T ss_dssp             CTTBHHHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCC
T ss_pred             CHHHHHHHHHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCC
Confidence            1111 1111111111  1111               12357899999999887531  1234688999988876

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.89  E-value=3.3e-22  Score=169.59  Aligned_cols=213  Identities=13%  Similarity=0.059  Sum_probs=154.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+|+||.+++++|+++|++|++++|+.                    .+|++|.+++.+++++.      ++|
T Consensus         4 ~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~--------------------~~D~~d~~~~~~~~~~~------~~d   57 (321)
T 1e6u_A            4 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD--------------------ELNLLDSRAVHDFFASE------RID   57 (321)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT--------------------TCCTTCHHHHHHHHHHH------CCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc--------------------cCCccCHHHHHHHHHhc------CCC
Confidence            5899999999999999999999999999998863                    27999999988887653      699


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCC---------------C-
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG---------------I-  144 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~---------------~-  144 (259)
                      +|||+|+.....   ....++.++.+++|+.++..+++++    .+.+.+++|++||...+-+               . 
T Consensus        58 ~vih~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~  130 (321)
T 1e6u_A           58 QVYLAAAKVGGI---VANNTYPADFIYQNMMIESNIIHAA----HQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLE  130 (321)
T ss_dssp             EEEECCCCCCCH---HHHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCC
T ss_pred             EEEEcCeecCCc---chhhhCHHHHHHHHHHHHHHHHHHH----HHhCCCeEEEEccHHHcCCCCCCCcCccccccCCCC
Confidence            999999964311   1124556788999999999999988    4445579999999765421               1 


Q ss_pred             CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCC-chHHHHhhhhc-----CC---C-----
Q 024994          145 PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPE-GSEFLDGIARQ-----TP---I-----  210 (259)
Q Consensus       145 ~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~-~~~~~~~~~~~-----~~---~-----  210 (259)
                      |....|+.+|.+.+.+++.++.++   +++++.++|+.+.++.......... ...+...+...     .+   .     
T Consensus       131 p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~  207 (321)
T 1e6u_A          131 PTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTP  207 (321)
T ss_dssp             GGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCC
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCE
Confidence            113589999999999999998776   8999999999999987642111101 11122222210     11   1     


Q ss_pred             -CCCCCHHHHHHHHHHHhCCCCC------CccccEEEeCCCceeee
Q 024994          211 -GRAGEPDEVSSLVAFLCLPAAS------YITGQIICVDGGVTVTV  249 (259)
Q Consensus       211 -~~~~~~~~va~~~~~l~~~~~~------~~~G~~l~~dgG~~~~~  249 (259)
                       ..+..++|++++++.++.....      ...|+++++.+|..+++
T Consensus       208 ~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~  253 (321)
T 1e6u_A          208 MREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTI  253 (321)
T ss_dssp             EECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEH
T ss_pred             EEEeEEHHHHHHHHHHHHhCcccccccccccCCceEEeCCCCCccH
Confidence             1244789999999988864321      12378999988876654

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.89  E-value=5.3e-23  Score=171.91  Aligned_cols=196  Identities=17%  Similarity=0.183  Sum_probs=148.3

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCccE
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNI   81 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~   81 (259)
                      ++|||||+|+||.+++++|+++|++|++++|.                     ++|++|.+++.++++..      ++|+
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------------------~~D~~d~~~~~~~~~~~------~~d~   59 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK---------------------LLDITNISQVQQVVQEI------RPHI   59 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT---------------------TSCTTCHHHHHHHHHHH------CCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc---------------------ccCCCCHHHHHHHHHhc------CCCE
Confidence            89999999999999999999999999999991                     38999999998888754      6999


Q ss_pred             EEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCC-----------CCCChhh
Q 024994           82 LINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-----------IPSVSLY  150 (259)
Q Consensus        82 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~-----------~~~~~~Y  150 (259)
                      |||+|+......    ..+++++.+++|+.++..+++++.    +.+ .++|++||...+.+           ..+...|
T Consensus        60 vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y  130 (287)
T 3sc6_A           60 IIHCAAYTKVDQ----AEKERDLAYVINAIGARNVAVASQ----LVG-AKLVYISTDYVFQGDRPEGYDEFHNPAPINIY  130 (287)
T ss_dssp             EEECCCCCCHHH----HTTCHHHHHHHHTHHHHHHHHHHH----HHT-CEEEEEEEGGGSCCCCSSCBCTTSCCCCCSHH
T ss_pred             EEECCcccChHH----HhcCHHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEchhhhcCCCCCCCCCCCCCCCCCCHH
Confidence            999999764211    124577889999999999999884    333 48999999765422           2245789


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCC-------CCCCCHHHHHHHH
Q 024994          151 GAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPI-------GRAGEPDEVSSLV  223 (259)
Q Consensus       151 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~va~~~  223 (259)
                      +.+|.+.+.+++.++.       +++.++|+.+.++.....     ............+.       ..+..++|+++++
T Consensus       131 ~~sK~~~E~~~~~~~~-------~~~ilR~~~v~G~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  198 (287)
T 3sc6_A          131 GASKYAGEQFVKELHN-------KYFIVRTSWLYGKYGNNF-----VKTMIRLGKEREEISVVADQIGSPTYVADLNVMI  198 (287)
T ss_dssp             HHHHHHHHHHHHHHCS-------SEEEEEECSEECSSSCCH-----HHHHHHHHTTCSEEEEECSCEECCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCC-------CcEEEeeeeecCCCCCcH-----HHHHHHHHHcCCCeEeecCcccCceEHHHHHHHH
Confidence            9999999999987742       568999999998754321     11122222222222       2344599999999


Q ss_pred             HHHhCCCCCCccccEEEeCCCceeee
Q 024994          224 AFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       224 ~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      .+++....    ++++++.+|..+++
T Consensus       199 ~~~~~~~~----~~~~~i~~~~~~s~  220 (287)
T 3sc6_A          199 NKLIHTSL----YGTYHVSNTGSCSW  220 (287)
T ss_dssp             HHHHTSCC----CEEEECCCBSCEEH
T ss_pred             HHHHhCCC----CCeEEEcCCCcccH
Confidence            99997543    66999999876654

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.89  E-value=2.2e-24  Score=172.71  Aligned_cols=198  Identities=13%  Similarity=0.113  Sum_probs=148.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC--EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||+|+||++++++|+++|+  +|++++|+.++          ...++.++.+|++|.+++.+++          
T Consensus         6 ~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----------~~~~~~~~~~D~~~~~~~~~~~----------   65 (215)
T 2a35_A            6 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------EHPRLDNPVGPLAELLPQLDGS----------   65 (215)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------CCTTEECCBSCHHHHGGGCCSC----------
T ss_pred             ceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----------cCCCceEEeccccCHHHHHHhh----------
Confidence            5899999999999999999999998  99999998765          1246788889998776544332          


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      +|+|||+||....      +.+++++.+++|+.++..+++++    .+.+.+++|++||.....+  +...|+.+|++++
T Consensus        66 ~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~--~~~~y~~sK~~~e  133 (215)
T 2a35_A           66 IDTAFCCLGTTIK------EAGSEEAFRAVDFDLPLAVGKRA----LEMGARHYLVVSALGADAK--SSIFYNRVKGELE  133 (215)
T ss_dssp             CSEEEECCCCCHH------HHSSHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEECCTTCCTT--CSSHHHHHHHHHH
T ss_pred             hcEEEECeeeccc------cCCCHHHHHHhhHHHHHHHHHHH----HHcCCCEEEEECCcccCCC--CccHHHHHHHHHH
Confidence            8999999996421      23467788999999999999887    4445679999999877543  4568999999999


Q ss_pred             HHHHHHHHHHccCCce-EEEEeCCceeCCCCCCCcCCCCchHHHHhhh-hcCCC----CCCCCHHHHHHHHHHHhCCCCC
Q 024994          159 QLTKNLACEWAKDNIR-TNTVAPWVIKTSMIKPFEEGPEGSEFLDGIA-RQTPI----GRAGEPDEVSSLVAFLCLPAAS  232 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~-v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~va~~~~~l~~~~~~  232 (259)
                      .+++.       .|++ ++.++||++.++.....        +.+.+. ...+.    ..+.+++|+++++..++.... 
T Consensus       134 ~~~~~-------~~~~~~~~vrp~~v~g~~~~~~--------~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~-  197 (215)
T 2a35_A          134 QALQE-------QGWPQLTIARPSLLFGPREEFR--------LAEILAAPIARILPGKYHGIEACDLARALWRLALEEG-  197 (215)
T ss_dssp             HHHTT-------SCCSEEEEEECCSEESTTSCEE--------GGGGTTCCCC----CHHHHHHHHHHHHHHHHHHTCCC-
T ss_pred             HHHHH-------cCCCeEEEEeCceeeCCCCcch--------HHHHHHHhhhhccCCCcCcEeHHHHHHHHHHHHhcCC-
Confidence            88765       2898 99999999999865311        000000 00111    123467999999999997542 


Q ss_pred             CccccEEEeCCCceeee
Q 024994          233 YITGQIICVDGGVTVTV  249 (259)
Q Consensus       233 ~~~G~~l~~dgG~~~~~  249 (259)
                         ++.+++.++..+++
T Consensus       198 ---~~~~~i~~~~~~~~  211 (215)
T 2a35_A          198 ---KGVRFVESDELRKL  211 (215)
T ss_dssp             ---SEEEEEEHHHHHHH
T ss_pred             ---CCceEEcHHHHHHh
Confidence               77899888766543

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.89  E-value=1.6e-22  Score=167.57  Aligned_cols=198  Identities=20%  Similarity=0.126  Sum_probs=146.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+|+||++++++|+ +|++|++++|+.+..         .  +   +.+|++|.++++++++..      ++|
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~---------~--~---~~~Dl~~~~~~~~~~~~~------~~d   59 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEIQ---------G--G---YKLDLTDFPRLEDFIIKK------RPD   59 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCCT---------T--C---EECCTTSHHHHHHHHHHH------CCS
T ss_pred             CEEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcCC---------C--C---ceeccCCHHHHHHHHHhc------CCC
Confidence            679999999999999999999 589999999987421         1  2   789999999998888754      699


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCC----------CChhh
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIP----------SVSLY  150 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~----------~~~~Y  150 (259)
                      +||||||....    +.+.+++++.+++|+.++..+++++.    +.+ +++|++||...+.+.+          +...|
T Consensus        60 ~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y  130 (273)
T 2ggs_A           60 VIINAAAMTDV----DKCEIEKEKAYKINAEAVRHIVRAGK----VID-SYIVHISTDYVFDGEKGNYKEEDIPNPINYY  130 (273)
T ss_dssp             EEEECCCCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHH----HTT-CEEEEEEEGGGSCSSSCSBCTTSCCCCSSHH
T ss_pred             EEEECCcccCh----hhhhhCHHHHHHHhHHHHHHHHHHHH----HhC-CeEEEEecceeEcCCCCCcCCCCCCCCCCHH
Confidence            99999997532    12356788999999999999999984    333 5999999987764432          35789


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCC------CCCCCCHHHHHHHHH
Q 024994          151 GAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTP------IGRAGEPDEVSSLVA  224 (259)
Q Consensus       151 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~va~~~~  224 (259)
                      +.+|++++.+++.         +....++|+.+.++  ..     .............+      ...+.+++|++++++
T Consensus       131 ~~sK~~~e~~~~~---------~~~~~iR~~~v~G~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~  194 (273)
T 2ggs_A          131 GLSKLLGETFALQ---------DDSLIIRTSGIFRN--KG-----FPIYVYKTLKEGKTVFAFKGYYSPISARKLASAIL  194 (273)
T ss_dssp             HHHHHHHHHHHCC---------TTCEEEEECCCBSS--SS-----HHHHHHHHHHTTCCEEEESCEECCCBHHHHHHHHH
T ss_pred             HHHHHHHHHHHhC---------CCeEEEeccccccc--cH-----HHHHHHHHHHcCCCEEeecCCCCceEHHHHHHHHH
Confidence            9999999998877         34567788877741  00     00111122222222      345778999999999


Q ss_pred             HHhCCCCCCccccEEEeCCCceeee
Q 024994          225 FLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       225 ~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      ++++...   +| ++++++ ..++.
T Consensus       195 ~~~~~~~---~g-~~~i~~-~~~s~  214 (273)
T 2ggs_A          195 ELLELRK---TG-IIHVAG-ERISR  214 (273)
T ss_dssp             HHHHHTC---CE-EEECCC-CCEEH
T ss_pred             HHHhcCc---CC-eEEECC-CcccH
Confidence            9997532   45 899998 66554

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.89  E-value=3.6e-23  Score=173.88  Aligned_cols=204  Identities=16%  Similarity=0.123  Sum_probs=150.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+|+||++++++|+ +|++|++++|+..                 ++.+|++|.+++.++++..      ++|
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-----------------~~~~D~~d~~~~~~~~~~~------~~d   56 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-----------------EFCGDFSNPKGVAETVRKL------RPD   56 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-----------------SSCCCTTCHHHHHHHHHHH------CCS
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-----------------cccccCCCHHHHHHHHHhc------CCC
Confidence            689999999999999999999 8999999999761                 3468999999988887643      699


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCC-----------CCChh
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI-----------PSVSL  149 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~-----------~~~~~  149 (259)
                      +|||+|+.....    ...+++++.+++|+.++..+++++    .+.+ .++|++||...+.+.           .+...
T Consensus        57 ~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~----~~~~-~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~  127 (299)
T 1n2s_A           57 VIVNAAAHTAVD----KAESEPELAQLLNATSVEAIAKAA----NETG-AWVVHYSTDYVFPGTGDIPWQETDATSPLNV  127 (299)
T ss_dssp             EEEECCCCCCHH----HHTTCHHHHHHHHTHHHHHHHHHH----TTTT-CEEEEEEEGGGSCCCTTCCBCTTSCCCCSSH
T ss_pred             EEEECcccCCHh----hhhcCHHHHHHHHHHHHHHHHHHH----HHcC-CcEEEEecccEEeCCCCCCCCCCCCCCCccH
Confidence            999999965321    112356778899999999999988    3443 489999997654322           23568


Q ss_pred             hhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCC-------CCCCCHHHHHHH
Q 024994          150 YGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPI-------GRAGEPDEVSSL  222 (259)
Q Consensus       150 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~va~~  222 (259)
                      |+.+|.+.+.+++.++       .+++.++|++++++.....     ............+.       ..+..++|++++
T Consensus       128 Y~~sK~~~E~~~~~~~-------~~~~ilRp~~v~G~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~  195 (299)
T 1n2s_A          128 YGKTKLAGEKALQDNC-------PKHLIFRTSWVYAGKGNNF-----AKTMLRLAKERQTLSVINDQYGAPTGAELLADC  195 (299)
T ss_dssp             HHHHHHHHHHHHHHHC-------SSEEEEEECSEECSSSCCH-----HHHHHHHHHHCSEEEEECSCEECCEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhC-------CCeEEEeeeeecCCCcCcH-----HHHHHHHHhcCCCEEeecCcccCCeeHHHHHHH
Confidence            9999999999988763       2899999999999865311     11122322222222       224458999999


Q ss_pred             HHHHhCCCCCCc-cccEEEeCCCceeee
Q 024994          223 VAFLCLPAASYI-TGQIICVDGGVTVTV  249 (259)
Q Consensus       223 ~~~l~~~~~~~~-~G~~l~~dgG~~~~~  249 (259)
                      +++++....... .|+++++.+|..++.
T Consensus       196 ~~~~~~~~~~~~~~~~~~~i~~~~~~s~  223 (299)
T 1n2s_A          196 TAHAIRVALNKPEVAGLYHLVAGGTTTW  223 (299)
T ss_dssp             HHHHHHHHHHCGGGCEEEECCCBSCEEH
T ss_pred             HHHHHHHhccccccCceEEEeCCCCCCH
Confidence            999886432123 588999999876654

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.89  E-value=5.2e-22  Score=168.10  Aligned_cols=214  Identities=16%  Similarity=0.109  Sum_probs=153.7

Q ss_pred             EEEEEcCcchHHHHHHHHHHHC--CCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            2 TALVTGGTRGIGHATVEELARF--GAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      ++|||||+|+||++++++|+++  |++|++++|+....+           ++.++.+|++|.+++.+++++      .++
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----------~~~~~~~D~~d~~~~~~~~~~------~~~   63 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-----------GIKFITLDVSNRDEIDRAVEK------YSI   63 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-----------TCCEEECCTTCHHHHHHHHHH------TTC
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-----------CceEEEecCCCHHHHHHHHhh------cCC
Confidence            4899999999999999999999  899999998764321           356788999999998888764      269


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCC------------CCC
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI------------PSV  147 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~------------~~~  147 (259)
                      |+|||+|+....     ...+++++.+++|+.++..+++++    .+.+.+++|++||...+.+.            .+.
T Consensus        64 d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~  134 (317)
T 3ajr_A           64 DAIFHLAGILSA-----KGEKDPALAYKVNMNGTYNILEAA----KQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPR  134 (317)
T ss_dssp             CEEEECCCCCHH-----HHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCC
T ss_pred             cEEEECCcccCC-----ccccChHHHhhhhhHHHHHHHHHH----HHcCCCEEEEecCHHHhCCCCCCCCccccccCCCC
Confidence            999999996421     123567889999999999999988    34456799999998765432            146


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCC--chHHHHhhhhcCC--C------CCCCCHH
Q 024994          148 SLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPE--GSEFLDGIARQTP--I------GRAGEPD  217 (259)
Q Consensus       148 ~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~--~~~~~~~~~~~~~--~------~~~~~~~  217 (259)
                      ..|+.+|++.+.+++.++.++   |++++.++|+.+..+..........  ...+.........  .      ..+...+
T Consensus       135 ~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  211 (317)
T 3ajr_A          135 TMFGVTKIAAELLGQYYYEKF---GLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMP  211 (317)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHH
T ss_pred             chHHHHHHHHHHHHHHHHHhc---CCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHH
Confidence            789999999999999998765   8999999988887654321111001  0111111111110  0      1133579


Q ss_pred             HHHHHHHHHhCCCC-CCccccEEEeCCC
Q 024994          218 EVSSLVAFLCLPAA-SYITGQIICVDGG  244 (259)
Q Consensus       218 ~va~~~~~l~~~~~-~~~~G~~l~~dgG  244 (259)
                      |++++++.++.... ...+|+++++.|+
T Consensus       212 Dva~a~~~~l~~~~~~~~~g~~~~i~~~  239 (317)
T 3ajr_A          212 DALKALVDLYEADRDKLVLRNGYNVTAY  239 (317)
T ss_dssp             HHHHHHHHHHHCCGGGCSSCSCEECCSE
T ss_pred             HHHHHHHHHHhCCccccccCceEecCCc
Confidence            99999988875432 2345789999863

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.88  E-value=1.5e-22  Score=169.17  Aligned_cols=200  Identities=13%  Similarity=0.054  Sum_probs=148.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHC--CCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARF--GAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||+|+||++++++|+++  |++|++++|+.++.+.+..      .++.++.+|++|.+++.++++        .
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~------~~~~~~~~D~~d~~~l~~~~~--------~   66 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLAD------QGVEVRHGDYNQPESLQKAFA--------G   66 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHH------TTCEEEECCTTCHHHHHHHTT--------T
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhh------cCCeEEEeccCCHHHHHHHHh--------c
Confidence            68999999999999999999999  9999999998876544321      257788999999988877763        5


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      +|+|||+|+...       . +      ++|+.++..+++++    .+.+.++||++||.....   ....|+.+|.+.+
T Consensus        67 ~d~vi~~a~~~~-------~-~------~~n~~~~~~l~~a~----~~~~~~~~v~~Ss~~~~~---~~~~y~~~K~~~E  125 (287)
T 2jl1_A           67 VSKLLFISGPHY-------D-N------TLLIVQHANVVKAA----RDAGVKHIAYTGYAFAEE---SIIPLAHVHLATE  125 (287)
T ss_dssp             CSEEEECCCCCS-------C-H------HHHHHHHHHHHHHH----HHTTCSEEEEEEETTGGG---CCSTHHHHHHHHH
T ss_pred             CCEEEEcCCCCc-------C-c------hHHHHHHHHHHHHH----HHcCCCEEEEECCCCCCC---CCCchHHHHHHHH
Confidence            899999999521       1 1      57889998888887    455567999999987642   2347999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHH-hhh---hcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLD-GIA---RQTPIGRAGEPDEVSSLVAFLCLPAASYI  234 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~va~~~~~l~~~~~~~~  234 (259)
                      .+++.       .|++++.++||++.++......     ..... ...   .......+.+++|+++++..++...  ..
T Consensus       126 ~~~~~-------~~~~~~ilrp~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~--~~  191 (287)
T 2jl1_A          126 YAIRT-------TNIPYTFLRNALYTDFFVNEGL-----RASTESGAIVTNAGSGIVNSVTRNELALAAATVLTEE--GH  191 (287)
T ss_dssp             HHHHH-------TTCCEEEEEECCBHHHHSSGGG-----HHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHTSS--SC
T ss_pred             HHHHH-------cCCCeEEEECCEeccccchhhH-----HHHhhCCceeccCCCCccCccCHHHHHHHHHHHhcCC--CC
Confidence            88753       4899999999998776421110     00111 000   0011234678999999999998643  24


Q ss_pred             cccEEEeCCCceeee
Q 024994          235 TGQIICVDGGVTVTV  249 (259)
Q Consensus       235 ~G~~l~~dgG~~~~~  249 (259)
                      .|++++++||..+++
T Consensus       192 ~g~~~~i~~~~~~s~  206 (287)
T 2jl1_A          192 ENKTYNLVSNQPWTF  206 (287)
T ss_dssp             TTEEEEECCSSCBCH
T ss_pred             CCcEEEecCCCcCCH
Confidence            789999999976654

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.88  E-value=9.9e-22  Score=177.05  Aligned_cols=221  Identities=13%  Similarity=0.077  Sum_probs=157.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHH---HHHHHHHH---------hcCCcEEEEEecCCCHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIEL---DARLHEWK---------NKGFKVTGSVCDLSSREQREKLI   68 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~---~~~~~~~~---------~~~~~~~~~~~D~~~~~~~~~~~   68 (259)
                      |+||||||+|+||.+++++|.++|++|++++|+....   +.+.+.+.         ....++.++.+|+++.+++.   
T Consensus       151 ~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~---  227 (508)
T 4f6l_B          151 GNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV---  227 (508)
T ss_dssp             EEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC---
T ss_pred             CeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC---
Confidence            5899999999999999999999999999999987732   22222221         12468999999999977766   


Q ss_pred             HHHHHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCc--cC----
Q 024994           69 ETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG--VR----  142 (259)
Q Consensus        69 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~--~~----  142 (259)
                           .. .++|+|||+|+...       ...+++..+++|+.++..+++++.    + ...++|++||...  ..    
T Consensus       228 -----~~-~~~D~Vih~Aa~~~-------~~~~~~~~~~~Nv~gt~~ll~~a~----~-~~~~~v~iSS~~vG~~~~~~~  289 (508)
T 4f6l_B          228 -----LP-ENMDTIIHAGARTD-------HFGDDDEFEKVNVQGTVDVIRLAQ----Q-HHARLIYVSTISVGTYFDIDT  289 (508)
T ss_dssp             -----CS-SCCSEEEECCCC---------------CCHHHHHHHHHHHHHHHH----T-TTCEEEEEEESCTTSEECTTC
T ss_pred             -----Cc-cCCCEEEECCceec-------CCCCHHHHhhhHHHHHHHHHHHHH----h-CCCcEEEeCChhhccCCccCC
Confidence                 22 58999999999753       123556778899999999999884    3 4589999999776  10    


Q ss_pred             ------------CCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCC-C---chHHHHhhhh
Q 024994          143 ------------GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGP-E---GSEFLDGIAR  206 (259)
Q Consensus       143 ------------~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~-~---~~~~~~~~~~  206 (259)
                                  +..+...|+.+|.+.+.+++.++.    .|++++.++||.+.++......... .   ..........
T Consensus       290 ~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~  365 (508)
T 4f6l_B          290 EDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQ  365 (508)
T ss_dssp             SCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH----TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTT
T ss_pred             cCcccccccccccccCCCcHHHHHHHHHHHHHHHHH----cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHH
Confidence                        012467899999999999998753    4999999999999998765431111 1   1112222222


Q ss_pred             cC--CCC------CCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          207 QT--PIG------RAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       207 ~~--~~~------~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      ..  |..      .+.+++|+++++++++....   .|+++++.++..+++
T Consensus       366 ~~~~~~~~g~~~~~~v~v~DvA~ai~~~~~~~~---~~~~~nl~~~~~~s~  413 (508)
T 4f6l_B          366 LDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT---PQIIYHVLSPNKMPV  413 (508)
T ss_dssp             CSEEETTGGGSEEECEEHHHHHHHHHHHTTBCC---SCSEEEESCSCEEEH
T ss_pred             cCCCCCCccCceEEEEcHHHHHHHHHHHHhCCC---CCCEEEeCCCCCCCH
Confidence            11  111      14568999999999986543   789999999987765

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.87  E-value=2.6e-21  Score=180.61  Aligned_cols=234  Identities=17%  Similarity=0.074  Sum_probs=160.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKN-KGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||+|+||++++++|+++|++|++++|+.........++.. ...++.++.+|++|.+++++++++.      ++
T Consensus        12 ~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~------~~   85 (699)
T 1z45_A           12 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY------KI   85 (699)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS------CC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhC------CC
Confidence            6899999999999999999999999999999875432222222221 1346788899999999988887642      69


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCC---------------C
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG---------------I  144 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~---------------~  144 (259)
                      |+|||+|+......    ..+..++.+++|+.++..+++++    .+.+.++||++||.+.+-.               .
T Consensus        86 D~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~  157 (699)
T 1z45_A           86 DSVIHFAGLKAVGE----STQIPLRYYHNNILGTVVLLELM----QQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPL  157 (699)
T ss_dssp             CEEEECCSCCCHHH----HHHSHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCC
T ss_pred             CEEEECCcccCcCc----cccCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEECcHHHhCCCccccccCCccccCCC
Confidence            99999999753221    12334668899999999998876    4445689999999765321               1


Q ss_pred             CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCC------CCchHHHHhhhhc--CCC---C--
Q 024994          145 PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEG------PEGSEFLDGIARQ--TPI---G--  211 (259)
Q Consensus       145 ~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~------~~~~~~~~~~~~~--~~~---~--  211 (259)
                      .+...|+.+|++++.+++.++.+. +.+++++.++|+.+.++........      ...-.........  .++   +  
T Consensus       158 ~p~~~Y~~sK~~~E~~~~~~~~~~-~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  236 (699)
T 1z45_A          158 GPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDD  236 (699)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC---
T ss_pred             CCCChHHHHHHHHHHHHHHHHHhc-cCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCc
Confidence            235689999999999999998774 3589999999999988753321111      0100111111111  111   1  


Q ss_pred             ----------CCCCHHHHHHHHHHHhCCC----CCCccccEEEeCCCceeee
Q 024994          212 ----------RAGEPDEVSSLVAFLCLPA----ASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       212 ----------~~~~~~~va~~~~~l~~~~----~~~~~G~~l~~dgG~~~~~  249 (259)
                                -+...+|++++++.++...    ...-.++++++.+|..+++
T Consensus       237 ~~~~~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~  288 (699)
T 1z45_A          237 YDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTV  288 (699)
T ss_dssp             ---CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEH
T ss_pred             ccCCCCCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcH
Confidence                      1345799999988777421    1122467899998876653

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.87  E-value=3.8e-21  Score=162.21  Aligned_cols=215  Identities=15%  Similarity=0.031  Sum_probs=151.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+|+||++++++|+++|+      +..           .....+.++.+|++|.+++.++++.      .++|
T Consensus         7 ~~vlVtGatG~iG~~l~~~L~~~g~------~~~-----------~~~~~~~~~~~D~~d~~~~~~~~~~------~~~d   63 (319)
T 4b8w_A            7 MRILVTGGSGLVGKAIQKVVADGAG------LPG-----------EDWVFVSSKDADLTDTAQTRALFEK------VQPT   63 (319)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHTTTC------CTT-----------CEEEECCTTTCCTTSHHHHHHHHHH------SCCS
T ss_pred             CeEEEECCCcHHHHHHHHHHHhcCC------ccc-----------ccccccCceecccCCHHHHHHHHhh------cCCC
Confidence            6899999999999999999999997      100           0011233446899999998888874      2699


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCC----------------C
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG----------------I  144 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~----------------~  144 (259)
                      +|||+|+......   .+.++.++.+++|+.++..+++++    .+.+.+++|++||...+-.                .
T Consensus        64 ~Vih~A~~~~~~~---~~~~~~~~~~~~nv~gt~~ll~a~----~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~  136 (319)
T 4b8w_A           64 HVIHLAAMVGGLF---RNIKYNLDFWRKNVHMNDNVLHSA----FEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPH  136 (319)
T ss_dssp             EEEECCCCCCCHH---HHTTCHHHHHHHHHHHHHHHHHHH----HHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBSCCC
T ss_pred             EEEECceeccccc---ccccCHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEEcchhhcCCCCCCCccccccccCCCC
Confidence            9999999743111   122345678899999999999887    5555679999999865321                1


Q ss_pred             CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCC-CchHHHHh----hhhcCCCC--------
Q 024994          145 PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGP-EGSEFLDG----IARQTPIG--------  211 (259)
Q Consensus       145 ~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~-~~~~~~~~----~~~~~~~~--------  211 (259)
                      |....|+.+|.+.+.+++.++.++   |++++.++|+.+.+|......... ....+...    .....+..        
T Consensus       137 p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  213 (319)
T 4b8w_A          137 NSNFGYSYAKRMIDVQNRAYFQQY---GCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPR  213 (319)
T ss_dssp             SSSHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCE
T ss_pred             CCcchHHHHHHHHHHHHHHHHHhh---CCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCee
Confidence            222369999999999999998876   899999999999998764321111 11112232    22222221        


Q ss_pred             -CCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          212 -RAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       212 -~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                       .+..++|++++++.++... ....|+++++.+|..+++
T Consensus       214 ~~~i~v~Dva~a~~~~~~~~-~~~~~~~~ni~~~~~~s~  251 (319)
T 4b8w_A          214 RQFIYSLDLAQLFIWVLREY-NEVEPIILSVGEEDEVSI  251 (319)
T ss_dssp             ECEEEHHHHHHHHHHHHHHC-CCSSCEEECCCGGGCEEH
T ss_pred             EEEEeHHHHHHHHHHHHhcc-ccCCceEEEecCCCceeH
Confidence             2357899999999888643 224678999998877654

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.87  E-value=5.1e-23  Score=172.04  Aligned_cols=200  Identities=13%  Similarity=0.098  Sum_probs=148.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||| +|+||.+++++|+++|++|++++|+.+.+          ..++.++.+|++|.+++.++++       +++|
T Consensus         4 ~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~----------~~~~~~~~~Dl~d~~~~~~~~~-------~~~d   65 (286)
T 3gpi_A            4 SKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM----------PAGVQTLIADVTRPDTLASIVH-------LRPE   65 (286)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC----------CTTCCEEECCTTCGGGCTTGGG-------GCCS
T ss_pred             CcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc----------ccCCceEEccCCChHHHHHhhc-------CCCC
Confidence            5799999 59999999999999999999999987652          2468889999999988777664       3699


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCC-----------CCCChh
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-----------IPSVSL  149 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~-----------~~~~~~  149 (259)
                      +|||+|+..         ..+.+..+++|+.++..+++++    .+.+.+++|++||...+-.           ..+...
T Consensus        66 ~vih~a~~~---------~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~  132 (286)
T 3gpi_A           66 ILVYCVAAS---------EYSDEHYRLSYVEGLRNTLSAL----EGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDF  132 (286)
T ss_dssp             EEEECHHHH---------HHC-----CCSHHHHHHHHHHT----TTSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCCSH
T ss_pred             EEEEeCCCC---------CCCHHHHHHHHHHHHHHHHHHH----hhCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCCCh
Confidence            999999952         2445677889999999998887    4555689999999765322           224678


Q ss_pred             hhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhh------cCCCCCCCCHHHHHHHH
Q 024994          150 YGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIAR------QTPIGRAGEPDEVSSLV  223 (259)
Q Consensus       150 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~va~~~  223 (259)
                      |+.+|.+.+.+ +.+        ++++.++|+.+.++....         +...+..      ......+..++|+++++
T Consensus       133 Y~~sK~~~E~~-~~~--------~~~~ilR~~~v~G~~~~~---------~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  194 (286)
T 3gpi_A          133 SGKRMLEAEAL-LAA--------YSSTILRFSGIYGPGRLR---------MIRQAQTPEQWPARNAWTNRIHRDDGAAFI  194 (286)
T ss_dssp             HHHHHHHHHHH-GGG--------SSEEEEEECEEEBTTBCH---------HHHHTTCGGGSCSSBCEECEEEHHHHHHHH
T ss_pred             hhHHHHHHHHH-Hhc--------CCeEEEecccccCCCchh---------HHHHHHhcccCCCcCceeEEEEHHHHHHHH
Confidence            99999999988 542        899999999999886542         1122211      01112355689999999


Q ss_pred             HHHhCCCCCCccccEEEeCCCceeee
Q 024994          224 AFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       224 ~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      ++++........|+++++.+|..+++
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~s~  220 (286)
T 3gpi_A          195 AYLIQQRSHAVPERLYIVTDNQPLPV  220 (286)
T ss_dssp             HHHHHHHTTSCCCSEEEECCSCCEEH
T ss_pred             HHHHhhhccCCCCceEEEeCCCCCCH
Confidence            99987532245789999999876654

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.86  E-value=2.1e-22  Score=170.62  Aligned_cols=212  Identities=15%  Similarity=0.080  Sum_probs=145.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHh--cCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKN--KGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||+|+||.+++++|+++|++|++++|+..........+..  ...++.++.+|++                  +
T Consensus         8 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~------------------~   69 (321)
T 3vps_A            8 HRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS------------------D   69 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT------------------T
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc------------------c
Confidence            6899999999999999999999999999999977521000000000  0122333344443                  6


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCC-----------CCCC
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-----------IPSV  147 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~-----------~~~~  147 (259)
                      +|+|||+|+........+    +....++ |+.++..+++++    .+.+.+++|++||...+..           ..+.
T Consensus        70 ~d~vi~~a~~~~~~~~~~----~~~~~~~-n~~~~~~ll~a~----~~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~  140 (321)
T 3vps_A           70 VRLVYHLASHKSVPRSFK----QPLDYLD-NVDSGRHLLALC----TSVGVPKVVVGSTCEVYGQADTLPTPEDSPLSPR  140 (321)
T ss_dssp             EEEEEECCCCCCHHHHTT----STTTTHH-HHHHHHHHHHHH----HHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCC
T ss_pred             CCEEEECCccCChHHHHh----CHHHHHH-HHHHHHHHHHHH----HHcCCCeEEEecCHHHhCCCCCCCCCCCCCCCCC
Confidence            999999999764321111    1223455 999999999888    4444579999999765432           2235


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHccCCc-eEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCC---------CCCCCHH
Q 024994          148 SLYGAYKGAMNQLTKNLACEWAKDNI-RTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPI---------GRAGEPD  217 (259)
Q Consensus       148 ~~Y~~sK~a~~~~~~~~a~e~~~~gi-~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~  217 (259)
                      ..|+.+|.+.+.+++.++.++   ++ +++.++|+.+.++.....   .....+........+.         ..+..++
T Consensus       141 ~~Y~~sK~~~E~~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  214 (321)
T 3vps_A          141 SPYAASKVGLEMVAGAHQRAS---VAPEVGIVRFFNVYGPGERPD---ALVPRLCANLLTRNELPVEGDGEQRRDFTYIT  214 (321)
T ss_dssp             SHHHHHHHHHHHHHHHHHHSS---SSCEEEEEEECEEECTTCCTT---SHHHHHHHHHHHHSEEEEETTSCCEECEEEHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHc---CCCceEEEEeccccCcCCCCC---ChHHHHHHHHHcCCCeEEeCCCCceEceEEHH
Confidence            789999999999999997654   89 999999999999875431   1112233333333221         1245789


Q ss_pred             HHHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          218 EVSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       218 ~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      |+++++++++....   .| ++++.+|..+++
T Consensus       215 Dva~~~~~~~~~~~---~g-~~~i~~~~~~s~  242 (321)
T 3vps_A          215 DVVDKLVALANRPL---PS-VVNFGSGQSLSV  242 (321)
T ss_dssp             HHHHHHHHGGGSCC---CS-EEEESCSCCEEH
T ss_pred             HHHHHHHHHHhcCC---CC-eEEecCCCcccH
Confidence            99999999997654   37 999999987654

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.86  E-value=8.4e-22  Score=164.36  Aligned_cols=196  Identities=14%  Similarity=0.105  Sum_probs=139.6

Q ss_pred             EEEEEcCcchHHHHHHHHHHHC--CCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            2 TALVTGGTRGIGHATVEELARF--GAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      ++|||||+|+||++++++|+++  |++|++++|+.++.+.+..      .++.++.+|++|.+++.++++        .+
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~D~~d~~~~~~~~~--------~~   66 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA------QGITVRQADYGDEAALTSALQ--------GV   66 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHH------TTCEEEECCTTCHHHHHHHTT--------TC
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhc------CCCeEEEcCCCCHHHHHHHHh--------CC
Confidence            4899999999999999999999  9999999998876544321      257788999999988877663        68


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      |+|||+|+...                +.|+.++..+++++    .+.+.++||++||....   +....|+.+|.+.+.
T Consensus        67 d~vi~~a~~~~----------------~~~~~~~~~l~~a~----~~~~~~~~v~~Ss~~~~---~~~~~y~~sK~~~e~  123 (286)
T 2zcu_A           67 EKLLLISSSEV----------------GQRAPQHRNVINAA----KAAGVKFIAYTSLLHAD---TSPLGLADEHIETEK  123 (286)
T ss_dssp             SEEEECC------------------------CHHHHHHHHH----HHHTCCEEEEEEETTTT---TCCSTTHHHHHHHHH
T ss_pred             CEEEEeCCCCc----------------hHHHHHHHHHHHHH----HHcCCCEEEEECCCCCC---CCcchhHHHHHHHHH
Confidence            99999999521                03566666666655    55556899999998775   233579999999998


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHH-hhhh---cCCCCCCCCHHHHHHHHHHHhCCCCCCcc
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLD-GIAR---QTPIGRAGEPDEVSSLVAFLCLPAASYIT  235 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~va~~~~~l~~~~~~~~~  235 (259)
                      +++.       .|++++.++||++.++.....      ..... ....   ......+.+++|+++++++++....  .+
T Consensus       124 ~~~~-------~~~~~~ilrp~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~  188 (286)
T 2zcu_A          124 MLAD-------SGIVYTLLRNGWYSENYLASA------PAALEHGVFIGAAGDGKIASATRADYAAAAARVISEAG--HE  188 (286)
T ss_dssp             HHHH-------HCSEEEEEEECCBHHHHHTTH------HHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHHSSS--CT
T ss_pred             HHHH-------cCCCeEEEeChHHhhhhHHHh------HHhhcCCceeccCCCCccccccHHHHHHHHHHHhcCCC--CC
Confidence            8764       389999999998876543110      00110 0000   0122346789999999999986532  47


Q ss_pred             ccEEEeCCCceeee
Q 024994          236 GQIICVDGGVTVTV  249 (259)
Q Consensus       236 G~~l~~dgG~~~~~  249 (259)
                      |+.++++|+..++.
T Consensus       189 g~~~~i~~~~~~s~  202 (286)
T 2zcu_A          189 GKVYELAGDSAWTL  202 (286)
T ss_dssp             TCEEEECCSSCBCH
T ss_pred             CceEEEeCCCcCCH
Confidence            99999999976554

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.84  E-value=1.5e-20  Score=157.14  Aligned_cols=199  Identities=15%  Similarity=0.083  Sum_probs=137.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHC-CCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARF-GAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||+|+||++++++|.++ |++|++++|+.++...+      ...++.++.+|++|.+++.+++        .++
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~------~~~~v~~~~~D~~d~~~l~~~~--------~~~   66 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD------WRGKVSVRQLDYFNQESMVEAF--------KGM   66 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG------GBTTBEEEECCTTCHHHHHHHT--------TTC
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh------hhCCCEEEEcCCCCHHHHHHHH--------hCC
Confidence            67999999999999999999998 99999999998765432      1347889999999999888776        368


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      |+|||+|+.....              ..|+.++..+++++    .+.+.++||++||.+.....    .|..++...  
T Consensus        67 d~vi~~a~~~~~~--------------~~~~~~~~~l~~aa----~~~gv~~iv~~Ss~~~~~~~----~~~~~~~~~--  122 (289)
T 3e48_A           67 DTVVFIPSIIHPS--------------FKRIPEVENLVYAA----KQSGVAHIIFIGYYADQHNN----PFHMSPYFG--  122 (289)
T ss_dssp             SEEEECCCCCCSH--------------HHHHHHHHHHHHHH----HHTTCCEEEEEEESCCSTTC----CSTTHHHHH--
T ss_pred             CEEEEeCCCCccc--------------hhhHHHHHHHHHHH----HHcCCCEEEEEcccCCCCCC----CCccchhHH--
Confidence            9999999964221              13555555555554    66667899999996543322    233333211  


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCC----CCCHHHHHHHHHHHhCCCCCCcc
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGR----AGEPDEVSSLVAFLCLPAASYIT  235 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~va~~~~~l~~~~~~~~~  235 (259)
                         .+...+...|++++.++||++.+++....      ......-....+.+.    +.+++|+++++.+++.....  .
T Consensus       123 ---~~e~~~~~~g~~~~ilrp~~~~~~~~~~~------~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~--~  191 (289)
T 3e48_A          123 ---YASRLLSTSGIDYTYVRMAMYMDPLKPYL------PELMNMHKLIYPAGDGRINYITRNDIARGVIAIIKNPDT--W  191 (289)
T ss_dssp             ---HHHHHHHHHCCEEEEEEECEESTTHHHHH------HHHHHHTEECCCCTTCEEEEECHHHHHHHHHHHHHCGGG--T
T ss_pred             ---HHHHHHHHcCCCEEEEeccccccccHHHH------HHHHHCCCEecCCCCceeeeEEHHHHHHHHHHHHcCCCc--C
Confidence               12222334589999999999988753210      001111111123333    56899999999999976543  3


Q ss_pred             ccEEEeCCCceeee
Q 024994          236 GQIICVDGGVTVTV  249 (259)
Q Consensus       236 G~~l~~dgG~~~~~  249 (259)
                      |++++++ |..++.
T Consensus       192 g~~~~~~-~~~~s~  204 (289)
T 3e48_A          192 GKRYLLS-GYSYDM  204 (289)
T ss_dssp             TCEEEEC-CEEEEH
T ss_pred             CceEEeC-CCcCCH
Confidence            8999999 877764

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.83  E-value=2.2e-19  Score=155.37  Aligned_cols=195  Identities=18%  Similarity=0.156  Sum_probs=146.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||+|+||++++++|+++|+ +|+.++|+                         +|.++++++++        ++
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~-------------------------~d~~~l~~~~~--------~~   47 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ-------------------------TKEEELESALL--------KA   47 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT-------------------------CCHHHHHHHHH--------HC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC-------------------------CCHHHHHHHhc--------cC
Confidence            6899999999999999999999998 88887775                         56777777765        48


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCC-EEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNG-SIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~-~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      |+|||+|+.....        +.+..+++|+.++..+++++    ++.+.. ++|++||.....    ...|+.+|.+.+
T Consensus        48 d~Vih~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~v~~Ss~~~~~----~~~Y~~sK~~~E  111 (369)
T 3st7_A           48 DFIVHLAGVNRPE--------HDKEFSLGNVSYLDHVLDIL----TRNTKKPAILLSSSIQATQ----DNPYGESKLQGE  111 (369)
T ss_dssp             SEEEECCCSBCTT--------CSTTCSSSCCBHHHHHHHHH----TTCSSCCEEEEEEEGGGGS----CSHHHHHHHHHH
T ss_pred             CEEEECCcCCCCC--------CHHHHHHHHHHHHHHHHHHH----HHhCCCCeEEEeCchhhcC----CCCchHHHHHHH
Confidence            9999999976432        23445678999999998887    454444 899999987654    578999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCC--------CCCCHHHHHHHHHHHhCCC
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIG--------RAGEPDEVSSLVAFLCLPA  230 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~va~~~~~l~~~~  230 (259)
                      .+++.++.+.   |++++.++|+.+.++....... .....+........+..        .+..++|++++++.++...
T Consensus       112 ~~~~~~~~~~---g~~~~i~R~~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~  187 (369)
T 3st7_A          112 QLLREYAEEY---GNTVYIYRWPNLFGKWCKPNYN-SVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGT  187 (369)
T ss_dssp             HHHHHHHHHH---CCCEEEEEECEEECTTCCTTSS-CHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHh---CCCEEEEECCceeCCCCCCCcc-hHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHHhCC
Confidence            9999998876   8999999999999886543211 11122333333333322        1345899999999998754


Q ss_pred             CCCccccEEEeCCCceeee
Q 024994          231 ASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       231 ~~~~~G~~l~~dgG~~~~~  249 (259)
                      .. ..|+++++.+|..+++
T Consensus       188 ~~-~~~~~~~i~~~~~~s~  205 (369)
T 3st7_A          188 PT-IENGVPTVPNVFKVTL  205 (369)
T ss_dssp             CC-EETTEECCSCCEEEEH
T ss_pred             cc-cCCceEEeCCCCceeH
Confidence            32 2389999999877764

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.83  E-value=2.6e-20  Score=156.60  Aligned_cols=209  Identities=15%  Similarity=0.043  Sum_probs=140.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCC-CEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||+|+||++++++|+++| ++|++++|+.++...  ..+..  .++.++.+|++|.+++.++++        .+
T Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~--~~~~~~~~D~~d~~~l~~~~~--------~~   73 (299)
T 2wm3_A            6 KLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRL--QGAEVVQGDQDDQVIMELALN--------GA   73 (299)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHH--TTCEEEECCTTCHHHHHHHHT--------TC
T ss_pred             CEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHH--CCCEEEEecCCCHHHHHHHHh--------cC
Confidence            589999999999999999999999 999999998765432  22222  257788999999999887763        68


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccC--CCCCChhhhhhHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR--GIPSVSLYGAYKGAM  157 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~--~~~~~~~Y~~sK~a~  157 (259)
                      |+|||+++.....            ..+.|+.+...+++++    .+.+.++||++|+.....  +......|..+|.++
T Consensus        74 d~vi~~a~~~~~~------------~~~~~~~~~~~~~~aa----~~~gv~~iv~~S~~~~~~~~~~~~~~~y~~sK~~~  137 (299)
T 2wm3_A           74 YATFIVTNYWESC------------SQEQEVKQGKLLADLA----RRLGLHYVVYSGLENIKKLTAGRLAAAHFDGKGEV  137 (299)
T ss_dssp             SEEEECCCHHHHT------------CHHHHHHHHHHHHHHH----HHHTCSEEEECCCCCHHHHTTTSCCCHHHHHHHHH
T ss_pred             CEEEEeCCCCccc------------cchHHHHHHHHHHHHH----HHcCCCEEEEEcCccccccCCCcccCchhhHHHHH
Confidence            9999999853110            1234555555555544    555668999966544221  112246799999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCC----CCCCHHHHHHHHHHHhCCCCCC
Q 024994          158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIG----RAGEPDEVSSLVAFLCLPAASY  233 (259)
Q Consensus       158 ~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~va~~~~~l~~~~~~~  233 (259)
                      +.+++.       .|++++.++||++.+++...+....... . ..+.-..|.+    .+.+++|+++++..++... ..
T Consensus       138 e~~~~~-------~gi~~~ilrp~~~~~~~~~~~~~~~~~~-g-~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~-~~  207 (299)
T 2wm3_A          138 EEYFRD-------IGVPMTSVRLPCYFENLLSHFLPQKAPD-G-KSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMP-EK  207 (299)
T ss_dssp             HHHHHH-------HTCCEEEEECCEEGGGGGTTTCCEECTT-S-SSEEECCCCTTSCEEEECGGGHHHHHHHHHHSH-HH
T ss_pred             HHHHHH-------CCCCEEEEeecHHhhhchhhcCCcccCC-C-CEEEEEecCCCCccceecHHHHHHHHHHHHcCh-hh
Confidence            988764       2899999999999988654221100000 0 0000011211    2457899999999988642 12


Q ss_pred             ccccEEEeCCCceee
Q 024994          234 ITGQIICVDGGVTVT  248 (259)
Q Consensus       234 ~~G~~l~~dgG~~~~  248 (259)
                      ..|+.++++| ..++
T Consensus       208 ~~g~~~~~~g-~~~s  221 (299)
T 2wm3_A          208 YVGQNIGLST-CRHT  221 (299)
T ss_dssp             HTTCEEECCS-EEEC
T ss_pred             hCCeEEEeee-ccCC
Confidence            4688999986 4444

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.83  E-value=1.5e-19  Score=150.81  Aligned_cols=197  Identities=13%  Similarity=0.042  Sum_probs=138.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++||||+ |+||.+++++|+++|++|++++|+.++...+..      .++.++.+|++|.+            + .++|
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~D~~d~~------------~-~~~d   65 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA------SGAEPLLWPGEEPS------------L-DGVT   65 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH------TTEEEEESSSSCCC------------C-TTCC
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh------CCCeEEEecccccc------------c-CCCC
Confidence            68999998 999999999999999999999999887655432      36889999999832            3 5799


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHh--CCCCEEEEecCCCccCC-----------CCCC
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKA--SGNGSIVFISSVGGVRG-----------IPSV  147 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~~ii~isS~~~~~~-----------~~~~  147 (259)
                      +|||+|+.....     ..  .              .+.++..+.+  .+..++|++||...+-.           ..+.
T Consensus        66 ~vi~~a~~~~~~-----~~--~--------------~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~  124 (286)
T 3ius_A           66 HLLISTAPDSGG-----DP--V--------------LAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPT  124 (286)
T ss_dssp             EEEECCCCBTTB-----CH--H--------------HHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCC
T ss_pred             EEEECCCccccc-----cH--H--------------HHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCC
Confidence            999999965322     11  0              1233333344  44589999999754321           2234


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHh
Q 024994          148 SLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLC  227 (259)
Q Consensus       148 ~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  227 (259)
                      ..|+.+|.+.+.+++.+      .+++++.++|+.+.++.......-.... . ..+........+...+|++++++.++
T Consensus       125 ~~Y~~sK~~~E~~~~~~------~~~~~~ilRp~~v~G~~~~~~~~~~~~~-~-~~~~~~~~~~~~i~v~Dva~a~~~~~  196 (286)
T 3ius_A          125 AARGRWRVMAEQQWQAV------PNLPLHVFRLAGIYGPGRGPFSKLGKGG-I-RRIIKPGQVFSRIHVEDIAQVLAASM  196 (286)
T ss_dssp             SHHHHHHHHHHHHHHHS------TTCCEEEEEECEEEBTTBSSSTTSSSSC-C-CEEECTTCCBCEEEHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHhh------cCCCEEEEeccceECCCchHHHHHhcCC-c-cccCCCCcccceEEHHHHHHHHHHHH
Confidence            57999999999988877      5899999999999988654321110000 0 00000011223556899999999999


Q ss_pred             CCCCCCccccEEEeCCCceeee
Q 024994          228 LPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       228 ~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      ....   .|+++++.+|..+++
T Consensus       197 ~~~~---~g~~~~i~~~~~~s~  215 (286)
T 3ius_A          197 ARPD---PGAVYNVCDDEPVPP  215 (286)
T ss_dssp             HSCC---TTCEEEECCSCCBCH
T ss_pred             hCCC---CCCEEEEeCCCCccH
Confidence            7543   788999999887653

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.81  E-value=1.5e-19  Score=155.53  Aligned_cols=206  Identities=16%  Similarity=0.029  Sum_probs=139.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEec-CCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCD-LSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D-~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||||+||++++++|+++|++|++++|+.++...  +++.. ..++.++.+| ++|.+++.++++        .+
T Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~--~~l~~-~~~v~~v~~D~l~d~~~l~~~~~--------~~   74 (352)
T 1xgk_A            6 KTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQA-IPNVTLFQGPLLNNVPLMDTLFE--------GA   74 (352)
T ss_dssp             CCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHHT-STTEEEEESCCTTCHHHHHHHHT--------TC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhH--HHHhh-cCCcEEEECCccCCHHHHHHHHh--------cC
Confidence            579999999999999999999999999999998776521  22322 2368888999 999999887763        58


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCC-ccCCCCCChhhhhhHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVG-GVRGIPSVSLYGAYKGAM  157 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~-~~~~~~~~~~Y~~sK~a~  157 (259)
                      |+||||++....               +.|..+ ..+++++    .+.+ .++||++||.. ...+.+....|..+|++.
T Consensus        75 d~Vi~~a~~~~~---------------~~~~~~-~~l~~aa----~~~g~v~~~V~~SS~~~~~~~~~~~~~y~~sK~~~  134 (352)
T 1xgk_A           75 HLAFINTTSQAG---------------DEIAIG-KDLADAA----KRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTV  134 (352)
T ss_dssp             SEEEECCCSTTS---------------CHHHHH-HHHHHHH----HHHSCCSEEEEEECCCGGGTSSCCCCTTTHHHHHH
T ss_pred             CEEEEcCCCCCc---------------HHHHHH-HHHHHHH----HHcCCccEEEEeCCccccccCCCCCccHHHHHHHH
Confidence            999999975310               134444 4444444    5555 58999999986 345545567899999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHH-hhhhcCC---CC--CCCCH-HHHHHHHHHHhCCC
Q 024994          158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLD-GIARQTP---IG--RAGEP-DEVSSLVAFLCLPA  230 (259)
Q Consensus       158 ~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~---~~--~~~~~-~~va~~~~~l~~~~  230 (259)
                      +.+++.+       +++++.++||++..+................ ......+   ..  .+.++ +|+++++..++...
T Consensus       135 E~~~~~~-------gi~~~ivrpg~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~  207 (352)
T 1xgk_A          135 ENYVRQL-------GLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDG  207 (352)
T ss_dssp             HHHHHTS-------SSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHc-------CCCEEEEecceecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCC
Confidence            9888763       8999999999775444322100000000000 0000001   11  24567 89999999988643


Q ss_pred             CCCccccEEEeCCC
Q 024994          231 ASYITGQIICVDGG  244 (259)
Q Consensus       231 ~~~~~G~~l~~dgG  244 (259)
                      .....|+++++.++
T Consensus       208 ~~~~~g~~~~l~~~  221 (352)
T 1xgk_A          208 PQKWNGHRIALTFE  221 (352)
T ss_dssp             HHHHTTCEEEECSE
T ss_pred             chhhCCeEEEEecC
Confidence            23457899999964

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.81  E-value=3.2e-19  Score=153.67  Aligned_cols=216  Identities=12%  Similarity=0.093  Sum_probs=144.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCC-----CEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Q 024994            1 MTALVTGGTRGIGHATVEELARFG-----AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIF   75 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G-----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (259)
                      |++|||||+|+||.+++++|+++|     ++|++++|+.....       ....++.++.+|++|.+++.++++..    
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-------~~~~~~~~~~~Dl~d~~~~~~~~~~~----   70 (364)
T 2v6g_A            2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-------HEDNPINYVQCDISDPDDSQAKLSPL----   70 (364)
T ss_dssp             EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-------CCSSCCEEEECCTTSHHHHHHHHTTC----
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-------cccCceEEEEeecCCHHHHHHHHhcC----
Confidence            689999999999999999999999     99999999876532       11346888999999999887776521    


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEE-------EecCCCccCC-----
Q 024994           76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIV-------FISSVGGVRG-----  143 (259)
Q Consensus        76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii-------~isS~~~~~~-----  143 (259)
                       .++|+|||+|+...         ++.++.+++|+.++..+++++.+..  .+..++|       ++||...+-.     
T Consensus        71 -~~~d~vih~a~~~~---------~~~~~~~~~n~~~~~~l~~a~~~~~--~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~  138 (364)
T 2v6g_A           71 -TDVTHVFYVTWANR---------STEQENCEANSKMFRNVLDAVIPNC--PNLKHISLQTGRKHYMGPFESYGKIESHD  138 (364)
T ss_dssp             -TTCCEEEECCCCCC---------SSHHHHHHHHHHHHHHHHHHHTTTC--TTCCEEEEECCTHHHHCCGGGTTTSCCCC
T ss_pred             -CCCCEEEECCCCCc---------chHHHHHHHhHHHHHHHHHHHHHhc--cccceEEeccCceEEEechhhccccccCC
Confidence             23999999999652         2356788999999999999884321  1346776       6777643211     


Q ss_pred             ---------CCCChhhhhhHHHHHHHHHHHHHHHccCC-ceEEEEeCCceeCCCCCCCcCCCCchH-HHHhh--hhcCCC
Q 024994          144 ---------IPSVSLYGAYKGAMNQLTKNLACEWAKDN-IRTNTVAPWVIKTSMIKPFEEGPEGSE-FLDGI--ARQTPI  210 (259)
Q Consensus       144 ---------~~~~~~Y~~sK~a~~~~~~~~a~e~~~~g-i~v~~v~pg~v~t~~~~~~~~~~~~~~-~~~~~--~~~~~~  210 (259)
                               .+....|    .+.+.+++.++.   ..+ ++++.++|+.+.++....... ..... ....+  ....+.
T Consensus       139 ~~~~E~~~~~~~~~~y----~~~E~~~~~~~~---~~~~~~~~ilRp~~v~G~~~~~~~~-~~~~~~~~~~~~~~~g~~~  210 (364)
T 2v6g_A          139 PPYTEDLPRLKYMNFY----YDLEDIMLEEVE---KKEGLTWSVHRPGNIFGFSPYSMMN-LVGTLCVYAAICKHEGKVL  210 (364)
T ss_dssp             SSBCTTSCCCSSCCHH----HHHHHHHHHHHT---TSTTCEEEEEEESSEECCCTTCSSC-HHHHHHHHHHHHHHHTCCB
T ss_pred             CCCCccccCCccchhh----HHHHHHHHHHhh---cCCCceEEEECCCceeCCCCCcccc-hHHHHHHHHHHHHhcCCce
Confidence                     0112345    234555554432   245 999999999999987642211 00011 12222  122222


Q ss_pred             C------------CCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          211 G------------RAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       211 ~------------~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      .            ...+.+|++++++.++...  ...|+++++.++..+++
T Consensus       211 ~~~g~~~~~~~~~~~~~v~Dva~a~~~~~~~~--~~~g~~~ni~~~~~~s~  259 (364)
T 2v6g_A          211 RFTGCKAAWDGYSDCSDADLIAEHHIWAAVDP--YAKNEAFNVSNGDVFKW  259 (364)
T ss_dssp             CCCSCHHHHHSCBCCEEHHHHHHHHHHHHHCG--GGTTEEEEECCSCCBCH
T ss_pred             ecCCCcccccccCCCCcHHHHHHHHHHHHhCC--CCCCceEEecCCCcCCH
Confidence            1            1223488999998888532  24789999999876543

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.80  E-value=2.1e-18  Score=147.89  Aligned_cols=207  Identities=11%  Similarity=0.016  Sum_probs=141.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCCh----hHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ----IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ   76 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (259)
                      |++|||||||+||++++++|+++|++|++++|+.    ++.+ ..+++.  ..++.++.+|++|.+++.+++++      
T Consensus        11 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~~~~l~--~~~v~~~~~Dl~d~~~l~~~~~~------   81 (346)
T 3i6i_A           11 GRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAK-IFKALE--DKGAIIVYGLINEQEAMEKILKE------   81 (346)
T ss_dssp             CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHH-HHHHHH--HTTCEEEECCTTCHHHHHHHHHH------
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHH-HHHHHH--hCCcEEEEeecCCHHHHHHHHhh------
Confidence            4799999999999999999999999999999977    3332 222332  24688899999999999888864      


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCcc----CCCCCChhhh
Q 024994           77 GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGV----RGIPSVSLYG  151 (259)
Q Consensus        77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~----~~~~~~~~Y~  151 (259)
                      .++|+|||+++.                   .|+.++..+++++    .+.+ ..+++. |+.+..    .+.++...|.
T Consensus        82 ~~~d~Vi~~a~~-------------------~n~~~~~~l~~aa----~~~g~v~~~v~-S~~g~~~~e~~~~~p~~~y~  137 (346)
T 3i6i_A           82 HEIDIVVSTVGG-------------------ESILDQIALVKAM----KAVGTIKRFLP-SEFGHDVNRADPVEPGLNMY  137 (346)
T ss_dssp             TTCCEEEECCCG-------------------GGGGGHHHHHHHH----HHHCCCSEEEC-SCCSSCTTTCCCCTTHHHHH
T ss_pred             CCCCEEEECCch-------------------hhHHHHHHHHHHH----HHcCCceEEee-cccCCCCCccCcCCCcchHH
Confidence            279999999996                   2788888888777    4444 567775 443322    1234567899


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCC---chHHHHhhhhcCCCCCCCCHHHHHHHHHHHhC
Q 024994          152 AYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPE---GSEFLDGIARQTPIGRAGEPDEVSSLVAFLCL  228 (259)
Q Consensus       152 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  228 (259)
                      .+|.+++.+.+.       .|++++.++||++.+...........   .......+........+.+++|++++++.++.
T Consensus       138 ~sK~~~e~~l~~-------~g~~~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~  210 (346)
T 3i6i_A          138 REKRRVRQLVEE-------SGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVD  210 (346)
T ss_dssp             HHHHHHHHHHHH-------TTCCBEEEECCEESSCCCSCC-----CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHH-------cCCCEEEEEecccccccCccccccccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHh
Confidence            999999877764       48999999999998866433221100   00000000011112235678999999999986


Q ss_pred             CCCCCccccEEEeCC-Cceeee
Q 024994          229 PAASYITGQIICVDG-GVTVTV  249 (259)
Q Consensus       229 ~~~~~~~G~~l~~dg-G~~~~~  249 (259)
                      ..  ...|+.+.+.| |..++.
T Consensus       211 ~~--~~~~~~~~i~g~~~~~s~  230 (346)
T 3i6i_A          211 DV--RTLNKSVHFRPSCNCLNI  230 (346)
T ss_dssp             CG--GGTTEEEECCCGGGEECH
T ss_pred             Cc--cccCeEEEEeCCCCCCCH
Confidence            53  23467777764 555543

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.80  E-value=1.8e-18  Score=145.67  Aligned_cols=202  Identities=13%  Similarity=0.127  Sum_probs=133.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCCh-------hHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ-------IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTS   73 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   73 (259)
                      |++|||||||+||++++++|+++|++|++++|+.       ++.+.+ +++..  ..+.++++|++|.+++.++++    
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~l~~--~~v~~v~~D~~d~~~l~~~~~----   75 (307)
T 2gas_A            3 NKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELI-DNYQS--LGVILLEGDINDHETLVKAIK----   75 (307)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHH-HHHHH--TTCEEEECCTTCHHHHHHHHT----
T ss_pred             cEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHH-HHHHh--CCCEEEEeCCCCHHHHHHHHh----
Confidence            5799999999999999999999999999999986       444332 33332  257888999999998887764    


Q ss_pred             HcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccC------CCCC
Q 024994           74 IFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVR------GIPS  146 (259)
Q Consensus        74 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~------~~~~  146 (259)
                          .+|+|||+++...                   +.+...+++++    .+.+ .+++|.  |..+..      +.|.
T Consensus        76 ----~~d~vi~~a~~~~-------------------~~~~~~l~~aa----~~~g~v~~~v~--S~~g~~~~~~~~~~p~  126 (307)
T 2gas_A           76 ----QVDIVICAAGRLL-------------------IEDQVKIIKAI----KEAGNVKKFFP--SEFGLDVDRHDAVEPV  126 (307)
T ss_dssp             ----TCSEEEECSSSSC-------------------GGGHHHHHHHH----HHHCCCSEEEC--SCCSSCTTSCCCCTTH
T ss_pred             ----CCCEEEECCcccc-------------------cccHHHHHHHH----HhcCCceEEee--cccccCcccccCCCcc
Confidence                6999999999642                   23344455544    5554 578873  433311      1222


Q ss_pred             ChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCC----CCchHHHHhhhhcCCCCCCCCHHHHHHH
Q 024994          147 VSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEG----PEGSEFLDGIARQTPIGRAGEPDEVSSL  222 (259)
Q Consensus       147 ~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~va~~  222 (259)
                      ...| .+|.+++.+.+.       .+++++.++||++.+++.......    .... ....+........+.+++|++++
T Consensus       127 ~~~y-~sK~~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~Dva~~  197 (307)
T 2gas_A          127 RQVF-EEKASIRRVIEA-------EGVPYTYLCCHAFTGYFLRNLAQLDATDPPRD-KVVILGDGNVKGAYVTEADVGTF  197 (307)
T ss_dssp             HHHH-HHHHHHHHHHHH-------HTCCBEEEECCEETTTTGGGTTCTTCSSCCSS-EEEEETTSCSEEEEECHHHHHHH
T ss_pred             hhHH-HHHHHHHHHHHH-------cCCCeEEEEcceeeccccccccccccccCCCC-eEEEecCCCcceEEeeHHHHHHH
Confidence            4678 999999887753       279999999999988765332111    0000 00000011111235689999999


Q ss_pred             HHHHhCCCCCCccccEEEeCC-Cceeee
Q 024994          223 VAFLCLPAASYITGQIICVDG-GVTVTV  249 (259)
Q Consensus       223 ~~~l~~~~~~~~~G~~l~~dg-G~~~~~  249 (259)
                      +..++.+..  ..|+.+.+.| |..++.
T Consensus       198 ~~~~l~~~~--~~~~~~~~~~~~~~~s~  223 (307)
T 2gas_A          198 TIRAANDPN--TLNKAVHIRLPKNYLTQ  223 (307)
T ss_dssp             HHHHHTCGG--GTTEEEECCCGGGEEEH
T ss_pred             HHHHHcCcc--ccCceEEEeCCCCcCCH
Confidence            999997532  3477787775 455543

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.79  E-value=2.9e-18  Score=144.71  Aligned_cols=207  Identities=13%  Similarity=0.102  Sum_probs=136.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCCh-----hHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ-----IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIF   75 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (259)
                      |++|||||||+||++++++|+++|++|++++|+.     ++.+. .+++.  ..++.++.+|++|.+++.++++      
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~~~--~~~~~~~~~D~~d~~~l~~~~~------   75 (313)
T 1qyd_A            5 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQM-LLYFK--QLGAKLIEASLDDHQRLVDALK------   75 (313)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHH-HHHHH--TTTCEEECCCSSCHHHHHHHHT------
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHH-HHHHH--hCCeEEEeCCCCCHHHHHHHHh------
Confidence            5799999999999999999999999999999984     23322 22232  3367889999999998887763      


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccC-----C-CCCCh
Q 024994           76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVR-----G-IPSVS  148 (259)
Q Consensus        76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~-----~-~~~~~  148 (259)
                        ++|+|||+++.....               .|+.+...+++++    .+.+ .++||+ |+.+...     + .|...
T Consensus        76 --~~d~vi~~a~~~~~~---------------~~~~~~~~l~~aa----~~~g~v~~~v~-S~~g~~~~~~~~~~~p~~~  133 (313)
T 1qyd_A           76 --QVDVVISALAGGVLS---------------HHILEQLKLVEAI----KEAGNIKRFLP-SEFGMDPDIMEHALQPGSI  133 (313)
T ss_dssp             --TCSEEEECCCCSSSS---------------TTTTTHHHHHHHH----HHSCCCSEEEC-SCCSSCTTSCCCCCSSTTH
T ss_pred             --CCCEEEECCccccch---------------hhHHHHHHHHHHH----HhcCCCceEEe-cCCcCCccccccCCCCCcc
Confidence              699999999975321               2566666666665    5565 578874 4332111     1 13356


Q ss_pred             hhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCC-----CCchHHHHhhhhcCCCCCCCCHHHHHHHH
Q 024994          149 LYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEG-----PEGSEFLDGIARQTPIGRAGEPDEVSSLV  223 (259)
Q Consensus       149 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~va~~~  223 (259)
                      .| .+|.+++.+.+.       .|++++.++||++.+++...+...     .... ....+........+.+++|+++++
T Consensus       134 ~y-~sK~~~e~~~~~-------~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~i~~~Dva~~~  204 (313)
T 1qyd_A          134 TF-IDKRKVRRAIEA-------ASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRD-KVLIYGDGNVKGIWVDEDDVGTYT  204 (313)
T ss_dssp             HH-HHHHHHHHHHHH-------TTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSS-EECCBTTSCSEEEEECHHHHHHHH
T ss_pred             hH-HHHHHHHHHHHh-------cCCCeEEEEeceeccccccccccccccccCCCC-eEEEeCCCCceEEEEEHHHHHHHH
Confidence            78 999999877652       489999999999877554322111     0000 000000001112255789999999


Q ss_pred             HHHhCCCCCCccccEEEeCC-Cceeee
Q 024994          224 AFLCLPAASYITGQIICVDG-GVTVTV  249 (259)
Q Consensus       224 ~~l~~~~~~~~~G~~l~~dg-G~~~~~  249 (259)
                      ..++....  ..|+.+.+.| |..++.
T Consensus       205 ~~~l~~~~--~~~~~~~~~g~~~~~s~  229 (313)
T 1qyd_A          205 IKSIDDPQ--TLNKTMYIRPPMNILSQ  229 (313)
T ss_dssp             HHHTTCGG--GSSSEEECCCGGGEEEH
T ss_pred             HHHHhCcc--cCCceEEEeCCCCccCH
Confidence            99886532  3477777776 455553

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.76  E-value=1.4e-18  Score=147.37  Aligned_cols=203  Identities=13%  Similarity=0.107  Sum_probs=131.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCCh-h----HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ-I----ELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIF   75 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~-~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (259)
                      |++|||||+|+||.+++++|+++|++|++++|+. +    .......++..  .++.++.+|++|.+++.++++      
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~--~~v~~v~~D~~d~~~l~~a~~------   76 (321)
T 3c1o_A            5 EKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRS--MGVTIIEGEMEEHEKMVSVLK------   76 (321)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHH--TTCEEEECCTTCHHHHHHHHT------
T ss_pred             cEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhc--CCcEEEEecCCCHHHHHHHHc------
Confidence            5799999999999999999999999999999986 1    12222222322  357889999999999888774      


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccC-----C-CCCCh
Q 024994           76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVR-----G-IPSVS  148 (259)
Q Consensus        76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~-----~-~~~~~  148 (259)
                        .+|+|||+++...                   +.+...+++++    .+.+ .++||  .|..+..     + .|...
T Consensus        77 --~~d~vi~~a~~~~-------------------~~~~~~l~~aa----~~~g~v~~~v--~S~~g~~~~~~~~~~p~~~  129 (321)
T 3c1o_A           77 --QVDIVISALPFPM-------------------ISSQIHIINAI----KAAGNIKRFL--PSDFGCEEDRIKPLPPFES  129 (321)
T ss_dssp             --TCSEEEECCCGGG-------------------SGGGHHHHHHH----HHHCCCCEEE--CSCCSSCGGGCCCCHHHHH
T ss_pred             --CCCEEEECCCccc-------------------hhhHHHHHHHH----HHhCCccEEe--ccccccCccccccCCCcch
Confidence              5899999999631                   33334444444    5554 57887  3433311     1 11245


Q ss_pred             hhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcC----CCCchHHHHhhhhcCCCCCCCCHHHHHHHHH
Q 024994          149 LYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE----GPEGSEFLDGIARQTPIGRAGEPDEVSSLVA  224 (259)
Q Consensus       149 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~  224 (259)
                      .| .+|.+++.+++.       .+++++.++||++.++....+..    ..... ....+........+.+++|+++++.
T Consensus       130 ~y-~sK~~~e~~~~~-------~~~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~Dva~~~~  200 (321)
T 3c1o_A          130 VL-EKKRIIRRAIEA-------AALPYTYVSANCFGAYFVNYLLHPSPHPNRND-DIVIYGTGETKFVLNYEEDIAKYTI  200 (321)
T ss_dssp             HH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHHHHHHCCCSSCCTTS-CEEEETTSCCEEEEECHHHHHHHHH
T ss_pred             HH-HHHHHHHHHHHH-------cCCCeEEEEeceeccccccccccccccccccC-ceEEecCCCcceeEeeHHHHHHHHH
Confidence            78 999999988763       27899999999886653211100    00000 0000001111223567999999999


Q ss_pred             HHhCCCCCCccccEEEeCC-Cceeee
Q 024994          225 FLCLPAASYITGQIICVDG-GVTVTV  249 (259)
Q Consensus       225 ~l~~~~~~~~~G~~l~~dg-G~~~~~  249 (259)
                      .++.+..  ..|+.+.+.| |..++.
T Consensus       201 ~~l~~~~--~~g~~~~~~g~~~~~t~  224 (321)
T 3c1o_A          201 KVACDPR--CCNRIVIYRPPKNIISQ  224 (321)
T ss_dssp             HHHHCGG--GTTEEEECCCGGGEEEH
T ss_pred             HHHhCcc--ccCeEEEEeCCCCcccH
Confidence            9997532  3478888876 566654

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.75  E-value=2e-17  Score=149.16  Aligned_cols=206  Identities=13%  Similarity=0.055  Sum_probs=140.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+||||||+|+||.+++++|+++|++|++++|+..+.+              .+.+|+.+.  .       .+.+ .++|
T Consensus       148 m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~--------------~v~~d~~~~--~-------~~~l-~~~D  203 (516)
T 3oh8_A          148 LTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPG--------------KRFWDPLNP--A-------SDLL-DGAD  203 (516)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTT--------------CEECCTTSC--C-------TTTT-TTCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCcc--------------ceeecccch--h-------HHhc-CCCC
Confidence            58999999999999999999999999999999876521              145777642  1       1223 4799


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCC-----------CCCChh
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-----------IPSVSL  149 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~-----------~~~~~~  149 (259)
                      +|||+|+.....   ..+.+..+..+++|+.++..+++++.   .+.+.++||++||.+.+-+           ..+...
T Consensus       204 ~Vih~A~~~~~~---~~~~~~~~~~~~~Nv~gt~~ll~a~a---~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~~~  277 (516)
T 3oh8_A          204 VLVHLAGEPIFG---RFNDSHKEAIRESRVLPTKFLAELVA---ESTQCTTMISASAVGFYGHDRGDEILTEESESGDDF  277 (516)
T ss_dssp             EEEECCCC--------CCGGGHHHHHHHTHHHHHHHHHHHH---HCSSCCEEEEEEEGGGGCSEEEEEEECTTSCCCSSH
T ss_pred             EEEECCCCcccc---ccchhHHHHHHHHHHHHHHHHHHHHH---hcCCCCEEEEeCcceEecCCCCCCccCCCCCCCcCh
Confidence            999999975433   34556678899999999999999742   3445679999999765420           113456


Q ss_pred             hhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcC--CC------CCCCCHHHHHH
Q 024994          150 YGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQT--PI------GRAGEPDEVSS  221 (259)
Q Consensus       150 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~------~~~~~~~~va~  221 (259)
                      |+.+|...+.+.+.    +...|++++.++||.++++....      ...+...+....  ..      ..+..++|+++
T Consensus       278 y~~~~~~~E~~~~~----~~~~gi~~~ilRp~~v~Gp~~~~------~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~  347 (516)
T 3oh8_A          278 LAEVCRDWEHATAP----ASDAGKRVAFIRTGVALSGRGGM------LPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTD  347 (516)
T ss_dssp             HHHHHHHHHHTTHH----HHHTTCEEEEEEECEEEBTTBSH------HHHHHHTTC---CCCCTTSCCEECEEEHHHHHH
T ss_pred             HHHHHHHHHHHHHH----HHhCCCCEEEEEeeEEECCCCCh------HHHHHHHHHhCCCcccCCCCceEceEeHHHHHH
Confidence            88888887766543    33459999999999999986310      011111111111  11      12456899999


Q ss_pred             HHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          222 LVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       222 ~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      ++++++....  ..| .+++.++..++.
T Consensus       348 ai~~~l~~~~--~~g-~~ni~~~~~~s~  372 (516)
T 3oh8_A          348 IYYRAIVDAQ--ISG-PINAVAPNPVSN  372 (516)
T ss_dssp             HHHHHHHCTT--CCE-EEEESCSCCEEH
T ss_pred             HHHHHHhCcc--cCC-cEEEECCCCCCH
Confidence            9999986433  344 688888766554

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.74  E-value=2.7e-18  Score=145.40  Aligned_cols=204  Identities=15%  Similarity=0.140  Sum_probs=128.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+|+||.+++++|+++|++|++++|+.+.......++..  ..+.++++|++|.+++.++++        .+|
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~--~~v~~v~~Dl~d~~~l~~a~~--------~~d   81 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQS--LGAIIVKGELDEHEKLVELMK--------KVD   81 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHH--TTCEEEECCTTCHHHHHHHHT--------TCS
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhc--CCCEEEEecCCCHHHHHHHHc--------CCC
Confidence            4799999999999999999999999999999987522222223322  257889999999998887774        599


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccCC--C---CCChhhhhhH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRG--I---PSVSLYGAYK  154 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~~--~---~~~~~Y~~sK  154 (259)
                      +|||+++...                   +.+...+++++    .+.+ .+++|+ |+.+....  .   |....| .+|
T Consensus        82 ~vi~~a~~~~-------------------~~~~~~l~~aa----~~~g~v~~~v~-S~~g~~~~~~~~~~p~~~~y-~sK  136 (318)
T 2r6j_A           82 VVISALAFPQ-------------------ILDQFKILEAI----KVAGNIKRFLP-SDFGVEEDRINALPPFEALI-ERK  136 (318)
T ss_dssp             EEEECCCGGG-------------------STTHHHHHHHH----HHHCCCCEEEC-SCCSSCTTTCCCCHHHHHHH-HHH
T ss_pred             EEEECCchhh-------------------hHHHHHHHHHH----HhcCCCCEEEe-eccccCcccccCCCCcchhH-HHH
Confidence            9999999531                   22334444444    5554 568874 43221111  1   123568 999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCC-CCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 024994          155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEG-PEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASY  233 (259)
Q Consensus       155 ~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  233 (259)
                      .+++.+.+.       .+++++.++||++..++....... .... ....+........+.+++|+++++..++....  
T Consensus       137 ~~~e~~~~~-------~~~~~~~lr~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~--  206 (318)
T 2r6j_A          137 RMIRRAIEE-------ANIPYTYVSANCFASYFINYLLRPYDPKD-EITVYGTGEAKFAMNYEQDIGLYTIKVATDPR--  206 (318)
T ss_dssp             HHHHHHHHH-------TTCCBEEEECCEEHHHHHHHHHCTTCCCS-EEEEETTSCCEEEEECHHHHHHHHHHHTTCGG--
T ss_pred             HHHHHHHHh-------cCCCeEEEEcceehhhhhhhhccccCCCC-ceEEecCCCceeeEeeHHHHHHHHHHHhcCcc--
Confidence            999877753       378999999998865432111000 0000 00000001111235578999999999986532  


Q ss_pred             ccccEEEeCC-Cceeee
Q 024994          234 ITGQIICVDG-GVTVTV  249 (259)
Q Consensus       234 ~~G~~l~~dg-G~~~~~  249 (259)
                      ..|+.+.+.| |..++.
T Consensus       207 ~~~~~~~~~g~~~~~s~  223 (318)
T 2r6j_A          207 ALNRVVIYRPSTNIITQ  223 (318)
T ss_dssp             GTTEEEECCCGGGEEEH
T ss_pred             ccCeEEEecCCCCccCH
Confidence            2367777765 455543

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.73  E-value=1.7e-17  Score=139.65  Aligned_cols=204  Identities=11%  Similarity=0.119  Sum_probs=130.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhH-----HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE-----LDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIF   75 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (259)
                      |+++||||+|+||.+++++|+++|++|++++|+...     .....+++.  ..++.++++|++|.+++.++++      
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~--~~~v~~v~~D~~d~~~l~~~~~------   76 (308)
T 1qyc_A            5 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK--ASGANIVHGSIDDHASLVEAVK------   76 (308)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH--TTTCEEECCCTTCHHHHHHHHH------
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHH--hCCCEEEEeccCCHHHHHHHHc------
Confidence            579999999999999999999999999999997432     111122232  3367889999999999888775      


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccC----C-CCCChh
Q 024994           76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVR----G-IPSVSL  149 (259)
Q Consensus        76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~----~-~~~~~~  149 (259)
                        .+|+|||+++...                   +.+...+++++    .+.+ .+++|. |+.+...    + .|....
T Consensus        77 --~~d~vi~~a~~~~-------------------~~~~~~l~~aa----~~~g~v~~~v~-S~~g~~~~~~~~~~p~~~~  130 (308)
T 1qyc_A           77 --NVDVVISTVGSLQ-------------------IESQVNIIKAI----KEVGTVKRFFP-SEFGNDVDNVHAVEPAKSV  130 (308)
T ss_dssp             --TCSEEEECCCGGG-------------------SGGGHHHHHHH----HHHCCCSEEEC-SCCSSCTTSCCCCTTHHHH
T ss_pred             --CCCEEEECCcchh-------------------hhhHHHHHHHH----HhcCCCceEee-cccccCccccccCCcchhH
Confidence              5899999999531                   23334444444    5554 578873 4433221    1 122457


Q ss_pred             hhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCC----CCchHHHHhhhhcCCCCCCCCHHHHHHHHHH
Q 024994          150 YGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEG----PEGSEFLDGIARQTPIGRAGEPDEVSSLVAF  225 (259)
Q Consensus       150 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~  225 (259)
                      | .+|.+++.+.+.       .+++++.++||++.+++.......    .... ....+........+.+++|+++++..
T Consensus       131 y-~sK~~~e~~~~~-------~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (308)
T 1qyc_A          131 F-EVKAKVRRAIEA-------EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRD-KVVILGDGNARVVFVKEEDIGTFTIK  201 (308)
T ss_dssp             H-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSS-EEEEETTSCCEEEEECHHHHHHHHHT
T ss_pred             H-HHHHHHHHHHHh-------cCCCeEEEEeceeccccccccccccccCCCCC-ceEEecCCCceEEEecHHHHHHHHHH
Confidence            8 999999877764       278999999998876544322110    0000 00000001111234578999999998


Q ss_pred             HhCCCCCCccccEEEeCC-Cceeee
Q 024994          226 LCLPAASYITGQIICVDG-GVTVTV  249 (259)
Q Consensus       226 l~~~~~~~~~G~~l~~dg-G~~~~~  249 (259)
                      ++...  ...|+.+.+.| |..++.
T Consensus       202 ~l~~~--~~~~~~~~~~g~~~~~s~  224 (308)
T 1qyc_A          202 AVDDP--RTLNKTLYLRLPANTLSL  224 (308)
T ss_dssp             TSSCG--GGTTEEEECCCGGGEEEH
T ss_pred             HHhCc--cccCeEEEEeCCCCccCH
Confidence            88643  23467788775 455543

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.66  E-value=2.9e-15  Score=125.62  Aligned_cols=204  Identities=17%  Similarity=0.108  Sum_probs=131.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+||||||||.||++++++|.++|++|+++.|+....            .+.   .|     ...      .+.+ ..+|
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~------------~~~---~~-----~~~------~~~l-~~~d   53 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG------------RIT---WD-----ELA------ASGL-PSCD   53 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT------------EEE---HH-----HHH------HHCC-CSCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC------------eee---cc-----hhh------Hhhc-cCCC
Confidence            7899999999999999999999999999999975421            111   11     111      1123 5799


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC--CCEEEEecCCCccCC-----------CCCC
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG--NGSIVFISSVGGVRG-----------IPSV  147 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~ii~isS~~~~~~-----------~~~~  147 (259)
                      .+||+|+.....+....+.+..+..++.|+.++-.+.+++    ...+  ...+|+.||...+-+           ..+.
T Consensus        54 ~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~----~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~  129 (298)
T 4b4o_A           54 AAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAI----TKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDF  129 (298)
T ss_dssp             EEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHH----HHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCS
T ss_pred             EEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHH----HHhCCCceEEEEEeeeeeecCCCCCcccccCCcccc
Confidence            9999999654455555677888889999999998888776    3332  345777777654322           1223


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcC--CC------CCCCCHHHH
Q 024994          148 SLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQT--PI------GRAGEPDEV  219 (259)
Q Consensus       148 ~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~------~~~~~~~~v  219 (259)
                      ..|+..|...+..     ......++++..++|+.+.++.....      ...........  +.      ..+...+|+
T Consensus       130 ~~~~~~~~~~e~~-----~~~~~~~~~~~~~r~~~v~g~~~~~~------~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dv  198 (298)
T 4b4o_A          130 DFFSNLVTKWEAA-----ARLPGDSTRQVVVRSGVVLGRGGGAM------GHMLLPFRLGLGGPIGSGHQFFPWIHIGDL  198 (298)
T ss_dssp             SHHHHHHHHHHHH-----HCCSSSSSEEEEEEECEEECTTSHHH------HHHHHHHHTTCCCCBTTSCSBCCEEEHHHH
T ss_pred             chhHHHHHHHHHH-----HHhhccCCceeeeeeeeEEcCCCCch------hHHHHHHhcCCcceecccCceeecCcHHHH
Confidence            4455444444321     12345689999999999998753111      01111111111  11      123468999


Q ss_pred             HHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          220 SSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       220 a~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      ++++.+++...  ...| ++++.++..+|.
T Consensus       199 a~a~~~~~~~~--~~~g-~yn~~~~~~~t~  225 (298)
T 4b4o_A          199 AGILTHALEAN--HVHG-VLNGVAPSSATN  225 (298)
T ss_dssp             HHHHHHHHHCT--TCCE-EEEESCSCCCBH
T ss_pred             HHHHHHHHhCC--CCCC-eEEEECCCccCH
Confidence            99999888543  2344 899988877654

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.44  E-value=2.7e-13  Score=115.27  Aligned_cols=165  Identities=11%  Similarity=0.081  Sum_probs=113.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-------EEEEeeCCh--hHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-------IVHTCSRNQ--IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETV   71 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   71 (259)
                      ++++||||+|+||.+++..|+++|+       .|++++++.  ++.+....++......+  + .|+.+.++..+++   
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~--~-~di~~~~~~~~a~---   78 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPL--L-AGLEATDDPKVAF---   78 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTT--E-EEEEEESCHHHHT---
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccc--c-CCeEeccChHHHh---
Confidence            3799999999999999999999996       899999875  23333333443321122  2 4555433333333   


Q ss_pred             HHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCc--------cC-
Q 024994           72 TSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG--------VR-  142 (259)
Q Consensus        72 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~--------~~-  142 (259)
                           ...|+|||+||.....   ..+   ..+.++.|+.++..+++++..+-  ..+.+++++|+...        .. 
T Consensus        79 -----~~~D~Vih~Ag~~~~~---~~~---~~~~~~~Nv~~t~~l~~a~~~~~--~~~~~vvv~snp~~~~~~~~~~~~~  145 (327)
T 1y7t_A           79 -----KDADYALLVGAAPRKA---GME---RRDLLQVNGKIFTEQGRALAEVA--KKDVKVLVVGNPANTNALIAYKNAP  145 (327)
T ss_dssp             -----TTCSEEEECCCCCCCT---TCC---HHHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSHHHHHHHHHHTCT
T ss_pred             -----CCCCEEEECCCcCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhhc--CCCeEEEEeCCchhhhHHHHHHHcC
Confidence                 3689999999975321   122   34578899999999998884321  12458888888652        11 


Q ss_pred             CCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCC
Q 024994          143 GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM  187 (259)
Q Consensus       143 ~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~  187 (259)
                      +.++...|+.+|...+.+.+.++..+   |+++..++|.++.++-
T Consensus       146 ~~~p~~~yg~tkl~~er~~~~~a~~~---g~~~~~vr~~~V~G~h  187 (327)
T 1y7t_A          146 GLNPRNFTAMTRLDHNRAKAQLAKKT---GTGVDRIRRMTVWGNH  187 (327)
T ss_dssp             TSCGGGEEECCHHHHHHHHHHHHHHH---TCCGGGEECCEEEBCS
T ss_pred             CCChhheeccchHHHHHHHHHHHHHh---CcChhheeeeEEEcCC
Confidence            34455679999999999999998776   7777788887776664

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.37  E-value=6.1e-14  Score=117.13  Aligned_cols=105  Identities=21%  Similarity=0.300  Sum_probs=79.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+||+|+++++.|+++|++|++++|+.++.+++.+++... ..+.++.+|+++.++++++++        .+|
T Consensus       120 k~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~-~~~~~~~~D~~~~~~~~~~~~--------~~D  190 (287)
T 1lu9_A          120 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR-FKVNVTAAETADDASRAEAVK--------GAH  190 (287)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-HTCCCEEEECCSHHHHHHHTT--------TCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEecCCCHHHHHHHHH--------hCC
Confidence            68999999999999999999999999999999998888877776542 135677899999988776653        589


Q ss_pred             EEEEcCCCCC-CCCCCCCCH-HHHHHHHHHhhHhHH
Q 024994           81 ILINNAAIAF-VKPTVDITA-EDMSTVSSTNFESVF  114 (259)
Q Consensus        81 ~vi~~ag~~~-~~~~~~~~~-~~~~~~~~~n~~~~~  114 (259)
                      +||||+|... ..+..+.+. ++++..+++|+.+++
T Consensus       191 vlVn~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~~  226 (287)
T 1lu9_A          191 FVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPL  226 (287)
T ss_dssp             EEEECCCTTCCSBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred             EEEECCCccccCCChhHcCchHHHHHHHHhhhhhhH
Confidence            9999998642 212212222 344456677777665

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.99  E-value=1.3e-09  Score=86.88  Aligned_cols=149  Identities=17%  Similarity=0.153  Sum_probs=89.3

Q ss_pred             CEEEEEcC----------------cchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHH
Q 024994            1 MTALVTGG----------------TRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQR   64 (259)
Q Consensus         1 k~~lItG~----------------s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   64 (259)
                      |++|||||                ||++|.++|+.|+++|++|++++++.. ++        ....+  ..+|+++.++ 
T Consensus         9 k~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~--------~~~g~--~~~dv~~~~~-   76 (226)
T 1u7z_A            9 LNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP--------TPPFV--KRVDVMTALE-   76 (226)
T ss_dssp             CEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC--------CCTTE--EEEECCSHHH-
T ss_pred             CEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc--------cCCCC--eEEccCcHHH-
Confidence            78999999                699999999999999999999988652 11        01122  2578887655 


Q ss_pred             HHHHHHHHHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHH--HHHhhHhHHHHHHHHHHHhHhC-CCCEEEEecCCCcc
Q 024994           65 EKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTV--SSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVGGV  141 (259)
Q Consensus        65 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~--~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~isS~~~~  141 (259)
                        +++.+.+.+ +++|++|||||+....+.. ...+.+.+.  -+.++.-.+.....+++.+.+. ..+.++ |      
T Consensus        77 --~~~~v~~~~-~~~Dili~~Aav~d~~p~~-~~~~KIkk~~~~~~~l~l~L~~~pdIL~~l~~~~~~~~~~-V------  145 (226)
T 1u7z_A           77 --MEAAVNASV-QQQNIFIGCAAVADYRAAT-VAPEKIKKQATQGDELTIKMVKNPDIVAGVAALKDHRPYV-V------  145 (226)
T ss_dssp             --HHHHHHHHG-GGCSEEEECCBCCSEEESS-CCSSCC-------CEEEEEEEECCCHHHHHHHCSSSCCEE-E------
T ss_pred             --HHHHHHHhc-CCCCEEEECCcccCCCCcc-CChHHhccccccCCceEEEEeecHHHHHHHHhhhcCCcEE-E------
Confidence              556666777 6899999999987544432 122222220  0223333333333445555543 223331 1      


Q ss_pred             CCCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCc
Q 024994          142 RGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWV  182 (259)
Q Consensus       142 ~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~  182 (259)
                       +++   ++.      +.+.+....++.++|+.+....|-.
T Consensus       146 -GFa---aEt------~~l~e~A~~kL~~k~~d~ivaN~~~  176 (226)
T 1u7z_A          146 -GFA---AET------NNVEEYARQKRIRKNLDLICANDVS  176 (226)
T ss_dssp             -EEE---EES------SSHHHHHHHHHHHHTCSEEEEEECS
T ss_pred             -Ecc---hhh------chHHHHHHHHHHhcCCCEEEEeecc
Confidence             111   111      2366677777877888877776643

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.98  E-value=3.3e-09  Score=75.82  Aligned_cols=72  Identities=18%  Similarity=0.181  Sum_probs=60.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCC-CEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |+++|+|+ |++|.++++.|.++| ++|++++|+.++.+...      ...+.++.+|+++.+++.+++        ..+
T Consensus         6 ~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~--------~~~   70 (118)
T 3ic5_A            6 WNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN------RMGVATKQVDAKDEAGLAKAL--------GGF   70 (118)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH------TTTCEEEECCTTCHHHHHHHT--------TTC
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH------hCCCcEEEecCCCHHHHHHHH--------cCC
Confidence            47999999 999999999999999 89999999988776553      235677889999988776665        369


Q ss_pred             cEEEEcCC
Q 024994           80 NILINNAA   87 (259)
Q Consensus        80 d~vi~~ag   87 (259)
                      |+||++++
T Consensus        71 d~vi~~~~   78 (118)
T 3ic5_A           71 DAVISAAP   78 (118)
T ss_dssp             SEEEECSC
T ss_pred             CEEEECCC
Confidence            99999996

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.90  E-value=2.5e-09  Score=85.49  Aligned_cols=90  Identities=19%  Similarity=0.254  Sum_probs=63.5

Q ss_pred             CEEEEEcC----------------cchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHH
Q 024994            1 MTALVTGG----------------TRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQR   64 (259)
Q Consensus         1 k~~lItG~----------------s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   64 (259)
                      |++|||||                ||++|.++|++|+++|++|++++|+.... .      .....+.  ..|+.+   +
T Consensus         4 k~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~-~------~~~~~~~--~~~v~s---~   71 (232)
T 2gk4_A            4 MKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALK-P------EPHPNLS--IREITN---T   71 (232)
T ss_dssp             CEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCC-C------CCCTTEE--EEECCS---H
T ss_pred             CEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccc-c------cCCCCeE--EEEHhH---H
Confidence            78999999                78899999999999999999999976421 0      0011233  345554   4


Q ss_pred             HHHHHHHHHHcCCCccEEEEcCCCCCCCCCCCCCHHHHH
Q 024994           65 EKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMS  103 (259)
Q Consensus        65 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~  103 (259)
                      +++++.+.+.+ ++.|++|+||++....+....+.+++.
T Consensus        72 ~em~~~v~~~~-~~~Dili~aAAvsD~~p~~~~~~e~~~  109 (232)
T 2gk4_A           72 KDLLIEMQERV-QDYQVLIHSMAVSDYTPVYMTGLEEVQ  109 (232)
T ss_dssp             HHHHHHHHHHG-GGCSEEEECSBCCSEEEEEEEEHHHHH
T ss_pred             HHHHHHHHHhc-CCCCEEEEcCccccccchhhcchhhhh
Confidence            55666666677 689999999998766555433444443

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.88  E-value=1.5e-08  Score=88.35  Aligned_cols=81  Identities=23%  Similarity=0.207  Sum_probs=70.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCC---CEEEEeeCChhHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024994            1 MTALVTGGTRGIGHATVEELARFG---AIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSSREQREKLIETVTSIFQ   76 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (259)
                      |+++|+|+ |+||+++++.|+++|   ..|++++|+.++++++.+++... +.++..+.+|++|.+++++++++.     
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~-----   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV-----   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH-----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh-----
Confidence            58999999 899999999999998   48999999999999888877643 246788899999999999988764     


Q ss_pred             CCccEEEEcCCC
Q 024994           77 GKLNILINNAAI   88 (259)
Q Consensus        77 ~~id~vi~~ag~   88 (259)
                       ++|+|||+++.
T Consensus        76 -~~DvVin~ag~   86 (405)
T 4ina_A           76 -KPQIVLNIALP   86 (405)
T ss_dssp             -CCSEEEECSCG
T ss_pred             -CCCEEEECCCc
Confidence             68999999984

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.79  E-value=4.6e-09  Score=79.53  Aligned_cols=78  Identities=15%  Similarity=0.065  Sum_probs=64.4

Q ss_pred             cchHHHHHHHHHHHCCCEEEEeeCChhHHH---HHHHHHHhcCCcEEEEEecCCCH--HHHHHHHHHHHHHcCCCccEEE
Q 024994            9 TRGIGHATVEELARFGAIVHTCSRNQIELD---ARLHEWKNKGFKVTGSVCDLSSR--EQREKLIETVTSIFQGKLNILI   83 (259)
Q Consensus         9 s~giG~~~a~~l~~~G~~V~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~~id~vi   83 (259)
                      ++-++.++++.|++.|++|++..|+.....   +..+.+...+.++..+++|+++.  ++++++++.+.+.+ ++ |+||
T Consensus        25 s~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~-G~-dVLV  102 (157)
T 3gxh_A           25 SGLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHK-GK-DVLV  102 (157)
T ss_dssp             EBCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTT-TS-CEEE
T ss_pred             cCCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcC-CC-CEEE
Confidence            346789999999999999999988765432   23444555677889999999999  99999999999888 67 9999


Q ss_pred             EcCCC
Q 024994           84 NNAAI   88 (259)
Q Consensus        84 ~~ag~   88 (259)
                      ||||+
T Consensus       103 nnAgg  107 (157)
T 3gxh_A          103 HCLAN  107 (157)
T ss_dssp             ECSBS
T ss_pred             ECCCC
Confidence            99996

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.63  E-value=8.1e-08  Score=75.23  Aligned_cols=101  Identities=19%  Similarity=0.239  Sum_probs=68.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      +++|||||+||||.++++.+...|++|++++|++++.+...    +.+...   ..|.++.+..+.+.+...   ++++|
T Consensus        40 ~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~----~~g~~~---~~d~~~~~~~~~~~~~~~---~~~~D  109 (198)
T 1pqw_A           40 ERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS----RLGVEY---VGDSRSVDFADEILELTD---GYGVD  109 (198)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH----TTCCSE---EEETTCSTHHHHHHHHTT---TCCEE
T ss_pred             CEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----HcCCCE---EeeCCcHHHHHHHHHHhC---CCCCe
Confidence            58999999999999999999999999999999987765432    223222   247776544333333221   13699


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCC
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVG  139 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~  139 (259)
                      ++|+|+|.           +.               .+.+++.++.  +|+++++++..
T Consensus       110 ~vi~~~g~-----------~~---------------~~~~~~~l~~--~G~~v~~g~~~  140 (198)
T 1pqw_A          110 VVLNSLAG-----------EA---------------IQRGVQILAP--GGRFIELGKKD  140 (198)
T ss_dssp             EEEECCCT-----------HH---------------HHHHHHTEEE--EEEEEECSCGG
T ss_pred             EEEECCch-----------HH---------------HHHHHHHhcc--CCEEEEEcCCC
Confidence            99999972           01               2334455543  58999998754

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.62  E-value=1.2e-07  Score=80.30  Aligned_cols=149  Identities=12%  Similarity=0.104  Sum_probs=99.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-------EEEEeeCC----hhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-------IVHTCSRN----QIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIE   69 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   69 (259)
                      ++++||||+|++|.+++..|+.+|.       .|++++++    .++++....++......+.   .|+....+...++ 
T Consensus         6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~---~~i~~~~~~~~al-   81 (329)
T 1b8p_A            6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLL---AGMTAHADPMTAF-   81 (329)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTE---EEEEEESSHHHHT-
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhccccc---CcEEEecCcHHHh-
Confidence            3799999999999999999999985       79999998    6556555555554211111   2332222222233 


Q ss_pred             HHHHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCc--------c
Q 024994           70 TVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG--------V  141 (259)
Q Consensus        70 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~--------~  141 (259)
                             ...|+||++||....   ...+.   .+.+..|+.....+++.+..+-  ..+.++|++|....        .
T Consensus        82 -------~~aD~Vi~~ag~~~~---~g~~r---~dl~~~N~~i~~~i~~~i~~~~--~p~a~ii~~SNPv~~~t~~~~~~  146 (329)
T 1b8p_A           82 -------KDADVALLVGARPRG---PGMER---KDLLEANAQIFTVQGKAIDAVA--SRNIKVLVVGNPANTNAYIAMKS  146 (329)
T ss_dssp             -------TTCSEEEECCCCCCC---TTCCH---HHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSHHHHHHHHHHT
T ss_pred             -------CCCCEEEEeCCCCCC---CCCCH---HHHHHHHHHHHHHHHHHHHHhc--CCCeEEEEccCchHHHHHHHHHH
Confidence                   468999999997532   12233   3467889988888887774321  13579999998652        1


Q ss_pred             C-CCCCChhhhhhHHHHHHHHHHHHHHH
Q 024994          142 R-GIPSVSLYGAYKGAMNQLTKNLACEW  168 (259)
Q Consensus       142 ~-~~~~~~~Y~~sK~a~~~~~~~~a~e~  168 (259)
                      . ++|..-.|+.++.--..+...++..+
T Consensus       147 ~~~~p~~~v~g~t~Ld~~r~~~~la~~l  174 (329)
T 1b8p_A          147 APSLPAKNFTAMLRLDHNRALSQIAAKT  174 (329)
T ss_dssp             CTTSCGGGEEECCHHHHHHHHHHHHHHH
T ss_pred             cCCCCHHHEEEeecHHHHHHHHHHHHHh
Confidence            2 44554568888776677778888777

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.61  E-value=8.5e-08  Score=84.66  Aligned_cols=76  Identities=14%  Similarity=0.117  Sum_probs=61.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+++||| +|++|+++++.|++.|++|++++|+.++.+++.+++    ..+..+.+|++|.+++.+++        .++|
T Consensus         4 k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~----~~~~~~~~Dv~d~~~l~~~l--------~~~D   70 (450)
T 1ff9_A            4 KSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV----QHSTPISLDVNDDAALDAEV--------AKHD   70 (450)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTC----TTEEEEECCTTCHHHHHHHH--------TTSS
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhc----CCceEEEeecCCHHHHHHHH--------cCCc
Confidence            5799998 799999999999999999999999987765543221    24677889999998877665        3699


Q ss_pred             EEEEcCCCC
Q 024994           81 ILINNAAIA   89 (259)
Q Consensus        81 ~vi~~ag~~   89 (259)
                      +|||+++..
T Consensus        71 vVIn~a~~~   79 (450)
T 1ff9_A           71 LVISLIPYT   79 (450)
T ss_dssp             EEEECCC--
T ss_pred             EEEECCccc
Confidence            999999863

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.57  E-value=1.3e-07  Score=80.23  Aligned_cols=77  Identities=13%  Similarity=0.181  Sum_probs=57.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      +++||||++||||..+++.+...|++|+++++++++++.+ +++   +..   ..+|.++.+++.+.+.+.   .++++|
T Consensus       147 ~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~---g~~---~~~d~~~~~~~~~~~~~~---~~~~~d  216 (333)
T 1v3u_A          147 ETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQI---GFD---AAFNYKTVNSLEEALKKA---SPDGYD  216 (333)
T ss_dssp             CEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT---TCS---EEEETTSCSCHHHHHHHH---CTTCEE
T ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hhc---CCc---EEEecCCHHHHHHHHHHH---hCCCCe
Confidence            5899999999999999999999999999999998877655 333   322   235777634444444433   224799


Q ss_pred             EEEEcCC
Q 024994           81 ILINNAA   87 (259)
Q Consensus        81 ~vi~~ag   87 (259)
                      ++|+|+|
T Consensus       217 ~vi~~~g  223 (333)
T 1v3u_A          217 CYFDNVG  223 (333)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999999

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.52  E-value=2.2e-07  Score=80.03  Aligned_cols=103  Identities=17%  Similarity=0.180  Sum_probs=70.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+++|+|+ |+||..+++.+...|++|++++|+.++++...+.+   +..   +.+|.++.+++++.++        ..|
T Consensus       167 ~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~---g~~---~~~~~~~~~~l~~~~~--------~~D  231 (369)
T 2eez_A          167 ASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF---GGR---VITLTATEANIKKSVQ--------HAD  231 (369)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TTS---EEEEECCHHHHHHHHH--------HCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc---Cce---EEEecCCHHHHHHHHh--------CCC
Confidence            68999999 99999999999999999999999998876554322   222   3567778777666553        589


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCC
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVG  139 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~  139 (259)
                      +||++++.....                   .+..+.+..++.|+  +++.||++++..
T Consensus       232 vVi~~~g~~~~~-------------------~~~li~~~~l~~mk--~gg~iV~v~~~~  269 (369)
T 2eez_A          232 LLIGAVLVPGAK-------------------APKLVTRDMLSLMK--EGAVIVDVAVDQ  269 (369)
T ss_dssp             EEEECCC--------------------------CCSCHHHHTTSC--TTCEEEECC---
T ss_pred             EEEECCCCCccc-------------------cchhHHHHHHHhhc--CCCEEEEEecCC
Confidence            999999964210                   01223344556664  358999999754

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.49  E-value=1.8e-08  Score=90.79  Aligned_cols=95  Identities=17%  Similarity=0.136  Sum_probs=67.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC-CCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ-GKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~~i   79 (259)
                      |++||||+ ||+|++++++|+++|++|++++|+.++.+++.+++.   ..+.    ++.|.           +.+. ..+
T Consensus       365 k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~---~~~~----~~~dl-----------~~~~~~~~  425 (523)
T 2o7s_A          365 KTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAIG---GKAL----SLTDL-----------DNYHPEDG  425 (523)
T ss_dssp             -CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTT---C-CE----ETTTT-----------TTC--CCS
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC---Ccee----eHHHh-----------hhccccCc
Confidence            47999999 599999999999999999999999988887766552   2221    22221           1111 358


Q ss_pred             cEEEEcCCCCCC-----CCCCCCCHHHHHHHHHHhhHhHH
Q 024994           80 NILINNAAIAFV-----KPTVDITAEDMSTVSSTNFESVF  114 (259)
Q Consensus        80 d~vi~~ag~~~~-----~~~~~~~~~~~~~~~~~n~~~~~  114 (259)
                      |+||||+|....     .++.+.+.+++..++++|+.+..
T Consensus       426 DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~~  465 (523)
T 2o7s_A          426 MVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRI  465 (523)
T ss_dssp             EEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSSS
T ss_pred             eEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCcc
Confidence            999999997422     34555667778888899887653

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.46  E-value=5.1e-08  Score=81.10  Aligned_cols=77  Identities=22%  Similarity=0.219  Sum_probs=55.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+++|||++ |+|+++++.|++.| +|++++|+.++.+++.+++.........+.+|+++.          .+.+ +++|
T Consensus       129 k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~----------~~~~-~~~D  195 (287)
T 1nvt_A          129 KNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGL----------DVDL-DGVD  195 (287)
T ss_dssp             CEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECT----------TCCC-TTCC
T ss_pred             CEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeH----------HHhh-CCCC
Confidence            689999997 99999999999999 999999999988887776643210000112344431          2223 5799


Q ss_pred             EEEEcCCCCC
Q 024994           81 ILINNAAIAF   90 (259)
Q Consensus        81 ~vi~~ag~~~   90 (259)
                      +||||++...
T Consensus       196 ilVn~ag~~~  205 (287)
T 1nvt_A          196 IIINATPIGM  205 (287)
T ss_dssp             EEEECSCTTC
T ss_pred             EEEECCCCCC
Confidence            9999999754

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.46  E-value=8.9e-10  Score=96.97  Aligned_cols=40  Identities=23%  Similarity=0.189  Sum_probs=35.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARL   41 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~   41 (259)
                      |+++|||++ +||+++|+.|.+.|++|++++++....+...
T Consensus       266 KtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa  305 (488)
T 3ond_A          266 KVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQAT  305 (488)
T ss_dssp             CEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            789999997 9999999999999999999999987765544

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.44  E-value=5.7e-07  Score=66.36  Aligned_cols=73  Identities=15%  Similarity=0.212  Sum_probs=58.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+++|+|+ |.+|.++++.|.++|++|++++++++..+.+.+.      .+.++.+|.++.+.++++      .. .+.|
T Consensus         7 ~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~------~~~~~~gd~~~~~~l~~~------~~-~~~d   72 (141)
T 3llv_A            7 YEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDE------GFDAVIADPTDESFYRSL------DL-EGVS   72 (141)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT------TCEEEECCTTCHHHHHHS------CC-TTCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC------CCcEEECCCCCHHHHHhC------Cc-ccCC
Confidence            36899998 7899999999999999999999999877665431      466788999998876554      11 4689


Q ss_pred             EEEEcCC
Q 024994           81 ILINNAA   87 (259)
Q Consensus        81 ~vi~~ag   87 (259)
                      ++|.+.+
T Consensus        73 ~vi~~~~   79 (141)
T 3llv_A           73 AVLITGS   79 (141)
T ss_dssp             EEEECCS
T ss_pred             EEEEecC
Confidence            9998877

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.41  E-value=7e-07  Score=79.06  Aligned_cols=75  Identities=13%  Similarity=0.155  Sum_probs=61.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHC-CCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARF-GAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |+++|+|+ |++|+++++.|++. |++|++++|+.++.+++.++     ..+..+.+|++|.+++.++++        ++
T Consensus        24 k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~-----~~~~~~~~D~~d~~~l~~~l~--------~~   89 (467)
T 2axq_A           24 KNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP-----SGSKAISLDVTDDSALDKVLA--------DN   89 (467)
T ss_dssp             EEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG-----GTCEEEECCTTCHHHHHHHHH--------TS
T ss_pred             CEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh-----cCCcEEEEecCCHHHHHHHHc--------CC
Confidence            47999997 99999999999998 78999999998887765433     135667899999888776653        68


Q ss_pred             cEEEEcCCCC
Q 024994           80 NILINNAAIA   89 (259)
Q Consensus        80 d~vi~~ag~~   89 (259)
                      |+|||+++..
T Consensus        90 DvVIn~tp~~   99 (467)
T 2axq_A           90 DVVISLIPYT   99 (467)
T ss_dssp             SEEEECSCGG
T ss_pred             CEEEECCchh
Confidence            9999999864

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.40  E-value=2.8e-06  Score=71.24  Aligned_cols=79  Identities=18%  Similarity=0.210  Sum_probs=61.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCC---hhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRN---QIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ   76 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (259)
                      |++||+|+ ||+|++++..|++.|+ +|++++|+   .++.+++.+++..... +.+...++.+.+++.+.+        
T Consensus       155 k~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~-~~~~~~~~~~~~~l~~~l--------  224 (315)
T 3tnl_A          155 KKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTD-CKAQLFDIEDHEQLRKEI--------  224 (315)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSS-CEEEEEETTCHHHHHHHH--------
T ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcC-CceEEeccchHHHHHhhh--------
Confidence            68999998 7999999999999998 89999999   8888888777765322 333446777766655443        


Q ss_pred             CCccEEEEcCCCC
Q 024994           77 GKLNILINNAAIA   89 (259)
Q Consensus        77 ~~id~vi~~ag~~   89 (259)
                      ...|+|||+....
T Consensus       225 ~~aDiIINaTp~G  237 (315)
T 3tnl_A          225 AESVIFTNATGVG  237 (315)
T ss_dssp             HTCSEEEECSSTT
T ss_pred             cCCCEEEECccCC
Confidence            2689999998653

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.39  E-value=7e-06  Score=69.37  Aligned_cols=147  Identities=12%  Similarity=0.054  Sum_probs=86.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCC--CEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFG--AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      ++++||||+|.+|..++..|+++|  ..|++++++++  +....++........+ .. +++..+..+++        ..
T Consensus         9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~~~~v-~~-~~~t~d~~~al--------~g   76 (326)
T 1smk_A            9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDTGAVV-RG-FLGQQQLEAAL--------TG   76 (326)
T ss_dssp             EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCSSCEE-EE-EESHHHHHHHH--------TT
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhcccccceE-EE-EeCCCCHHHHc--------CC
Confidence            379999999999999999999999  78999998776  2333344432211111 11 22333444443        47


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCcc------------CCCCC
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV------------RGIPS  146 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~------------~~~~~  146 (259)
                      .|+||+++|......   .+.   .+.+..|+.....+.+.+..+   ..++.|+++|.....            .++|.
T Consensus        77 aDvVi~~ag~~~~~g---~~r---~dl~~~N~~~~~~i~~~i~~~---~p~~~viv~SNPv~~~~~~~t~~~~~~~~~p~  147 (326)
T 1smk_A           77 MDLIIVPAGVPRKPG---MTR---DDLFKINAGIVKTLCEGIAKC---CPRAIVNLISNPVNSTVPIAAEVFKKAGTYDP  147 (326)
T ss_dssp             CSEEEECCCCCCCSS---CCC---SHHHHHHHHHHHHHHHHHHHH---CTTSEEEECCSSHHHHHHHHHHHHHHHTCCCT
T ss_pred             CCEEEEcCCcCCCCC---CCH---HHHHHHHHHHHHHHHHHHHhh---CCCeEEEEECCchHHHHHHHHHHHHHccCCCc
Confidence            899999999753211   111   234778998888888877432   223555555444333            12343


Q ss_pred             ChhhhhhHHHHHHHHHHHHHHH
Q 024994          147 VSLYGAYKGAMNQLTKNLACEW  168 (259)
Q Consensus       147 ~~~Y~~sK~a~~~~~~~~a~e~  168 (259)
                      .-..+..-.--..+-..++..+
T Consensus       148 ~rviG~~~Ld~~r~~~~la~~l  169 (326)
T 1smk_A          148 KRLLGVTMLDVVRANTFVAEVL  169 (326)
T ss_dssp             TSEEECCHHHHHHHHHHHHHHH
T ss_pred             ccEEEEeehHHHHHHHHHHHHh
Confidence            3334443223445556666665

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.39  E-value=1.2e-06  Score=74.65  Aligned_cols=102  Identities=16%  Similarity=0.174  Sum_probs=71.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      +++||+|++|+||..+++.+...|++|++++|++++.+.. +++   +..   ...|.++.+++.+.+.++..   +++|
T Consensus       171 ~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~-~~~---g~~---~~~d~~~~~~~~~~~~~~~~---~~~D  240 (347)
T 2hcy_A          171 HWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELF-RSI---GGE---VFIDFTKEKDIVGAVLKATD---GGAH  240 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHH-HHT---TCC---EEEETTTCSCHHHHHHHHHT---SCEE
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHH-HHc---CCc---eEEecCccHhHHHHHHHHhC---CCCC
Confidence            5899999999999999999999999999999988877443 332   322   22477755555555554432   3799


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCC
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVG  139 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~  139 (259)
                      ++|+++|..          +               .++.+++.++.  +|+++.+++..
T Consensus       241 ~vi~~~g~~----------~---------------~~~~~~~~l~~--~G~iv~~g~~~  272 (347)
T 2hcy_A          241 GVINVSVSE----------A---------------AIEASTRYVRA--NGTTVLVGMPA  272 (347)
T ss_dssp             EEEECSSCH----------H---------------HHHHHTTSEEE--EEEEEECCCCT
T ss_pred             EEEECCCcH----------H---------------HHHHHHHHHhc--CCEEEEEeCCC
Confidence            999999831          1               23444444433  58999998754

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.37  E-value=1e-06  Score=74.45  Aligned_cols=102  Identities=15%  Similarity=0.148  Sum_probs=69.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      +++|||||+|+||..+++.+...|++|++++|++++++.+. ++   +...   .+|.++.+..+++.+..   .+.++|
T Consensus       142 ~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~-~~---g~~~---~~~~~~~~~~~~~~~~~---~~~~~D  211 (327)
T 1qor_A          142 EQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KA---GAWQ---VINYREEDLVERLKEIT---GGKKVR  211 (327)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH---TCSE---EEETTTSCHHHHHHHHT---TTCCEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-Hc---CCCE---EEECCCccHHHHHHHHh---CCCCce
Confidence            58999999999999999999999999999999988776543 23   3222   24666654443333322   113699


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCc
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG  140 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~  140 (259)
                      ++|+|+|..                          ..+.+++.++.  +|+++.+++..+
T Consensus       212 ~vi~~~g~~--------------------------~~~~~~~~l~~--~G~iv~~g~~~~  243 (327)
T 1qor_A          212 VVYDSVGRD--------------------------TWERSLDCLQR--RGLMVSFGNSSG  243 (327)
T ss_dssp             EEEECSCGG--------------------------GHHHHHHTEEE--EEEEEECCCTTC
T ss_pred             EEEECCchH--------------------------HHHHHHHHhcC--CCEEEEEecCCC
Confidence            999999921                          02334444443  589999988654

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.37  E-value=1.3e-06  Score=74.06  Aligned_cols=78  Identities=15%  Similarity=0.216  Sum_probs=56.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      +++||||++|+||.++++.+...|++|++++|++++++.+. ++   +...   ..|.++.+..+++.+.. .  +.++|
T Consensus       147 ~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~---g~~~---~~d~~~~~~~~~i~~~~-~--~~~~d  216 (333)
T 1wly_A          147 DYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETAR-KL---GCHH---TINYSTQDFAEVVREIT-G--GKGVD  216 (333)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH---TCSE---EEETTTSCHHHHHHHHH-T--TCCEE
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCCE---EEECCCHHHHHHHHHHh-C--CCCCe
Confidence            57999999999999999999999999999999988776543 33   3222   24666644433333322 1  13699


Q ss_pred             EEEEcCCC
Q 024994           81 ILINNAAI   88 (259)
Q Consensus        81 ~vi~~ag~   88 (259)
                      ++|+|+|.
T Consensus       217 ~vi~~~g~  224 (333)
T 1wly_A          217 VVYDSIGK  224 (333)
T ss_dssp             EEEECSCT
T ss_pred             EEEECCcH
Confidence            99999994

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.33  E-value=1.2e-06  Score=74.88  Aligned_cols=77  Identities=14%  Similarity=0.164  Sum_probs=55.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      +++||||++|+||..+++.+...|+ +|+++++++++.+.+.+++   +..   ..+|..+.+..    +.+.+..++.+
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~---g~~---~~~d~~~~~~~----~~~~~~~~~~~  231 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL---GFD---AAINYKKDNVA----EQLRESCPAGV  231 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS---CCS---EEEETTTSCHH----HHHHHHCTTCE
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc---CCc---eEEecCchHHH----HHHHHhcCCCC
Confidence            5899999999999999999999999 9999999988776554322   322   23566653222    22333332369


Q ss_pred             cEEEEcCC
Q 024994           80 NILINNAA   87 (259)
Q Consensus        80 d~vi~~ag   87 (259)
                      |++|+|+|
T Consensus       232 d~vi~~~G  239 (357)
T 2zb4_A          232 DVYFDNVG  239 (357)
T ss_dssp             EEEEESCC
T ss_pred             CEEEECCC
Confidence            99999999

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.33  E-value=1.4e-06  Score=74.46  Aligned_cols=77  Identities=17%  Similarity=0.224  Sum_probs=56.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC-CCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ-GKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~~i   79 (259)
                      +++||+||+|+||..+++.+...|++|++++|++++++.+ +++   +...   .+|.++.+..+++    .+..+ .++
T Consensus       164 ~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~---g~~~---~~~~~~~~~~~~~----~~~~~~~~~  232 (354)
T 2j8z_A          164 DYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKL---GAAA---GFNYKKEDFSEAT----LKFTKGAGV  232 (354)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH---TCSE---EEETTTSCHHHHH----HHHTTTSCE
T ss_pred             CEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCcE---EEecCChHHHHHH----HHHhcCCCc
Confidence            5799999999999999999999999999999998887655 343   3222   2566654333333    33332 369


Q ss_pred             cEEEEcCCC
Q 024994           80 NILINNAAI   88 (259)
Q Consensus        80 d~vi~~ag~   88 (259)
                      |++|+|+|.
T Consensus       233 d~vi~~~G~  241 (354)
T 2j8z_A          233 NLILDCIGG  241 (354)
T ss_dssp             EEEEESSCG
T ss_pred             eEEEECCCc
Confidence            999999994

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.30  E-value=1.9e-06  Score=73.60  Aligned_cols=76  Identities=17%  Similarity=0.216  Sum_probs=55.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC-CCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ-GKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~~i   79 (259)
                      +++||+|++|+||..+++.+...|++|+++++++++++.. +++   +...   .+|..+.+..+++    .+..+ .++
T Consensus       172 ~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~---ga~~---~~d~~~~~~~~~~----~~~~~~~~~  240 (351)
T 1yb5_A          172 ESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQN---GAHE---VFNHREVNYIDKI----KKYVGEKGI  240 (351)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT---TCSE---EEETTSTTHHHHH----HHHHCTTCE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-HHc---CCCE---EEeCCCchHHHHH----HHHcCCCCc
Confidence            5899999999999999999999999999999998877633 332   3222   2566664433333    33332 369


Q ss_pred             cEEEEcCC
Q 024994           80 NILINNAA   87 (259)
Q Consensus        80 d~vi~~ag   87 (259)
                      |++|+|+|
T Consensus       241 D~vi~~~G  248 (351)
T 1yb5_A          241 DIIIEMLA  248 (351)
T ss_dssp             EEEEESCH
T ss_pred             EEEEECCC
Confidence            99999998

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.30  E-value=1.4e-06  Score=73.85  Aligned_cols=78  Identities=13%  Similarity=0.167  Sum_probs=56.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      +++||+|++|+||..+++.+...|++|+++++++++++.+.+++   +...   ..|..+.+..    +.+.+..++.+|
T Consensus       151 ~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~----~~~~~~~~~~~d  220 (336)
T 4b7c_A          151 ETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL---GFDG---AIDYKNEDLA----AGLKRECPKGID  220 (336)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT---CCSE---EEETTTSCHH----HHHHHHCTTCEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCCE---EEECCCHHHH----HHHHHhcCCCce
Confidence            58999999999999999999999999999999998876653433   3222   2466553332    233333335799


Q ss_pred             EEEEcCCC
Q 024994           81 ILINNAAI   88 (259)
Q Consensus        81 ~vi~~ag~   88 (259)
                      ++|+|+|.
T Consensus       221 ~vi~~~g~  228 (336)
T 4b7c_A          221 VFFDNVGG  228 (336)
T ss_dssp             EEEESSCH
T ss_pred             EEEECCCc
Confidence            99999983

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.29  E-value=6.7e-07  Score=65.82  Aligned_cols=74  Identities=18%  Similarity=0.182  Sum_probs=56.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+++|+|+ |++|..+++.|.+.|++|++++|+.+..+...    ..  ...++..|.++.+.+.++      .. .+.|
T Consensus         7 ~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~----~~--~~~~~~~d~~~~~~l~~~------~~-~~~d   72 (144)
T 2hmt_A            7 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA----SY--ATHAVIANATEENELLSL------GI-RNFE   72 (144)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTT----TT--CSEEEECCTTCHHHHHTT------TG-GGCS
T ss_pred             CcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----Hh--CCEEEEeCCCCHHHHHhc------CC-CCCC
Confidence            36899998 99999999999999999999999887654322    11  235667899887655433      12 4699


Q ss_pred             EEEEcCCC
Q 024994           81 ILINNAAI   88 (259)
Q Consensus        81 ~vi~~ag~   88 (259)
                      ++|++++.
T Consensus        73 ~vi~~~~~   80 (144)
T 2hmt_A           73 YVIVAIGA   80 (144)
T ss_dssp             EEEECCCS
T ss_pred             EEEECCCC
Confidence            99999884

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.28  E-value=1.1e-06  Score=74.74  Aligned_cols=78  Identities=14%  Similarity=0.259  Sum_probs=56.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      +++||+|++|+||..+++.+...|++|+++++++++++.+.+++   +...   ..|.++.+++.+.++++   .++.+|
T Consensus       157 ~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~---g~~~---~~d~~~~~~~~~~~~~~---~~~~~d  227 (345)
T 2j3h_A          157 ETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKF---GFDD---AFNYKEESDLTAALKRC---FPNGID  227 (345)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTS---CCSE---EEETTSCSCSHHHHHHH---CTTCEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCce---EEecCCHHHHHHHHHHH---hCCCCc
Confidence            58999999999999999999999999999999988776543222   3222   24666543444444433   224699


Q ss_pred             EEEEcCC
Q 024994           81 ILINNAA   87 (259)
Q Consensus        81 ~vi~~ag   87 (259)
                      ++|+|+|
T Consensus       228 ~vi~~~g  234 (345)
T 2j3h_A          228 IYFENVG  234 (345)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999998

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=98.27  E-value=2.7e-06  Score=75.01  Aligned_cols=108  Identities=17%  Similarity=0.198  Sum_probs=73.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEE--ecCC---------CHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSV--CDLS---------SREQREKLIE   69 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~--~D~~---------~~~~~~~~~~   69 (259)
                      +++||+|++|+||..+++.+...|++|+++++++++++.+ +++   +....+..  .|+.         +.++++.+.+
T Consensus       222 ~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~-~~l---Ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (447)
T 4a0s_A          222 DIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV-RAL---GCDLVINRAELGITDDIADDPRRVVETGRKLAK  297 (447)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT---TCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-Hhc---CCCEEEecccccccccccccccccchhhhHHHH
Confidence            5799999999999999999999999999999988877654 332   33222221  1221         2345555667


Q ss_pred             HHHHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCc
Q 024994           70 TVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG  140 (259)
Q Consensus        70 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~  140 (259)
                      ++.+..+..+|++|+++|..           .+               +.+++.++  .+|+++++++..+
T Consensus       298 ~v~~~~g~g~Dvvid~~G~~-----------~~---------------~~~~~~l~--~~G~iv~~G~~~~  340 (447)
T 4a0s_A          298 LVVEKAGREPDIVFEHTGRV-----------TF---------------GLSVIVAR--RGGTVVTCGSSSG  340 (447)
T ss_dssp             HHHHHHSSCCSEEEECSCHH-----------HH---------------HHHHHHSC--TTCEEEESCCTTC
T ss_pred             HHHHHhCCCceEEEECCCch-----------HH---------------HHHHHHHh--cCCEEEEEecCCC
Confidence            77776644699999999930           11               23344443  4699999987654

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=98.24  E-value=3.1e-05  Score=64.65  Aligned_cols=143  Identities=10%  Similarity=-0.012  Sum_probs=86.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC--EEEEeeC--ChhHHHHHHHHHHhc---CCcEEEEEecCCCHHHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSR--NQIELDARLHEWKNK---GFKVTGSVCDLSSREQREKLIETVTS   73 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~--~V~~~~r--~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   73 (259)
                      ++++||||+|++|.+++..|+.+|.  .++++++  +.++++....++.+.   ...+.+.. +  +.+    .      
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~~----a------   67 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GYE----D------   67 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CGG----G------
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CHH----H------
Confidence            5899999999999999999999886  6888999  776655444444432   12222222 2  211    1      


Q ss_pred             HcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCcc--------CCC
Q 024994           74 IFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGV--------RGI  144 (259)
Q Consensus        74 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~--------~~~  144 (259)
                       + ...|+||++||.....   ..+.+   +.+..|+..+..+.+.+    .+.. ++.++++|.....        .+.
T Consensus        68 -~-~~aDvVi~~ag~~~~~---g~~r~---dl~~~N~~i~~~i~~~i----~~~~p~~~viv~SNPv~~~~~~~~~~~~~  135 (303)
T 1o6z_A           68 -T-AGSDVVVITAGIPRQP---GQTRI---DLAGDNAPIMEDIQSSL----DEHNDDYISLTTSNPVDLLNRHLYEAGDR  135 (303)
T ss_dssp             -G-TTCSEEEECCCCCCCT---TCCHH---HHHHHHHHHHHHHHHHH----HTTCSCCEEEECCSSHHHHHHHHHHHSSS
T ss_pred             -h-CCCCEEEEcCCCCCCC---CCCHH---HHHHHHHHHHHHHHHHH----HHHCCCcEEEEeCChHHHHHHHHHHHcCC
Confidence             2 4799999999975321   12332   45788998888887777    4443 3455554444321        223


Q ss_pred             CCChhhhh-hHHHHHHHHHHHHHHH
Q 024994          145 PSVSLYGA-YKGAMNQLTKNLACEW  168 (259)
Q Consensus       145 ~~~~~Y~~-sK~a~~~~~~~~a~e~  168 (259)
                      |..-..+. +-.-...+-..++..+
T Consensus       136 p~~rviG~gt~Ld~~r~~~~la~~l  160 (303)
T 1o6z_A          136 SREQVIGFGGRLDSARFRYVLSEEF  160 (303)
T ss_dssp             CGGGEEECCHHHHHHHHHHHHHHHH
T ss_pred             CHHHeeecccchhHHHHHHHHHHHh
Confidence            43344444 3333445566666666

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.20  E-value=8.5e-06  Score=59.51  Aligned_cols=74  Identities=12%  Similarity=0.039  Sum_probs=56.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+++|+|+ |.+|..+++.|.+.|++|++++|+++..+.+.+..     .+.++..|.++.+.+.+.      .. .+.|
T Consensus         5 m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~-----~~~~~~~d~~~~~~l~~~------~~-~~~d   71 (140)
T 1lss_A            5 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI-----DALVINGDCTKIKTLEDA------GI-EDAD   71 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-----SSEEEESCTTSHHHHHHT------TT-TTCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhc-----CcEEEEcCCCCHHHHHHc------Cc-ccCC
Confidence            57899987 99999999999999999999999987765543221     345667898887664321      12 4689


Q ss_pred             EEEEcCC
Q 024994           81 ILINNAA   87 (259)
Q Consensus        81 ~vi~~ag   87 (259)
                      ++|.+.+
T Consensus        72 ~vi~~~~   78 (140)
T 1lss_A           72 MYIAVTG   78 (140)
T ss_dssp             EEEECCS
T ss_pred             EEEEeeC
Confidence            9999975

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.19  E-value=3.6e-06  Score=69.25  Aligned_cols=73  Identities=12%  Similarity=0.283  Sum_probs=54.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+++|+|+ ||+|+++++.|++.|++|++++|+.++.+++.+++...+ .+.  ..|+   +++       .+   +..|
T Consensus       120 k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~-~~~--~~~~---~~~-------~~---~~~D  182 (271)
T 1nyt_A          120 LRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG-SIQ--ALSM---DEL-------EG---HEFD  182 (271)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS-SEE--ECCS---GGG-------TT---CCCS
T ss_pred             CEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccC-Cee--EecH---HHh-------cc---CCCC
Confidence            68999998 799999999999999999999999998888776664322 221  2332   111       11   3799


Q ss_pred             EEEEcCCCCC
Q 024994           81 ILINNAAIAF   90 (259)
Q Consensus        81 ~vi~~ag~~~   90 (259)
                      +|||+++...
T Consensus       183 ivVn~t~~~~  192 (271)
T 1nyt_A          183 LIINATSSGI  192 (271)
T ss_dssp             EEEECCSCGG
T ss_pred             EEEECCCCCC
Confidence            9999999753

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=98.16  E-value=1.7e-05  Score=66.68  Aligned_cols=146  Identities=13%  Similarity=0.104  Sum_probs=92.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC--EEEEeeC--ChhHHHHHHHHHHhc----CCcEEEEEecCCCHHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSR--NQIELDARLHEWKNK----GFKVTGSVCDLSSREQREKLIETVT   72 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~--~V~~~~r--~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~   72 (259)
                      ++++||||+|++|.+++..|+.+|.  .+.++++  +.++++....++...    +..+.+...+  |  ++.++     
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~--d--~l~~a-----   71 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES--D--ENLRI-----   71 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE--T--TCGGG-----
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC--c--chHHH-----
Confidence            5799999999999999999999885  5888998  665554433333321    1122222211  0  01111     


Q ss_pred             HHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCcc--------CCC
Q 024994           73 SIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV--------RGI  144 (259)
Q Consensus        73 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~--------~~~  144 (259)
                        + ...|+|||+||.....   ..+.   .+.++.|+..+..+++++..    ..+..++++|.....        .+.
T Consensus        72 --l-~gaD~Vi~~Ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~i~~----~~~~~vlv~SNPv~~~t~~~~k~~~~  138 (313)
T 1hye_A           72 --I-DESDVVIITSGVPRKE---GMSR---MDLAKTNAKIVGKYAKKIAE----ICDTKIFVITNPVDVMTYKALVDSKF  138 (313)
T ss_dssp             --G-TTCSEEEECCSCCCCT---TCCH---HHHHHHHHHHHHHHHHHHHH----HCCCEEEECSSSHHHHHHHHHHHHCC
T ss_pred             --h-CCCCEEEECCCCCCCC---CCcH---HHHHHHHHHHHHHHHHHHHH----hCCeEEEEecCcHHHHHHHHHHhhCc
Confidence              2 4799999999975321   1232   34588999999999888743    334566666655432        234


Q ss_pred             CCChhhhh-hHHHHHHHHHHHHHHH
Q 024994          145 PSVSLYGA-YKGAMNQLTKNLACEW  168 (259)
Q Consensus       145 ~~~~~Y~~-sK~a~~~~~~~~a~e~  168 (259)
                      |+.-.++. +..-...+-..++..+
T Consensus       139 p~~rviG~gt~LD~~r~~~~la~~l  163 (313)
T 1hye_A          139 ERNQVFGLGTHLDSLRFKVAIAKFF  163 (313)
T ss_dssp             CTTSEEECTTHHHHHHHHHHHHHHH
T ss_pred             ChhcEEEeCccHHHHHHHHHHHHHh
Confidence            55556666 6665667777777776

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.14  E-value=1e-05  Score=66.89  Aligned_cols=76  Identities=16%  Similarity=0.168  Sum_probs=56.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++||+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+++......+.+...+..+.   .+.+        ...
T Consensus       128 k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l---~~~l--------~~~  195 (283)
T 3jyo_A          128 DSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGI---EDVI--------AAA  195 (283)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTH---HHHH--------HHS
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHH---HHHH--------hcC
Confidence            68999998 8999999999999998 799999999999888887764322223333444332   2222        247


Q ss_pred             cEEEEcCCC
Q 024994           80 NILINNAAI   88 (259)
Q Consensus        80 d~vi~~ag~   88 (259)
                      |+|||+...
T Consensus       196 DiVInaTp~  204 (283)
T 3jyo_A          196 DGVVNATPM  204 (283)
T ss_dssp             SEEEECSST
T ss_pred             CEEEECCCC
Confidence            999999865

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.10  E-value=1.4e-05  Score=68.01  Aligned_cols=77  Identities=19%  Similarity=0.249  Sum_probs=55.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHC-CCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC-CC
Q 024994            1 MTALVTGGTRGIGHATVEELARF-GAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ-GK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~~   78 (259)
                      +++||||++|+||..+++.+... |++|+++++++++++.+ +++   +...   ..|.++.+..+    ++.+... ++
T Consensus       172 ~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~-~~~---g~~~---~~~~~~~~~~~----~~~~~~~~~~  240 (347)
T 1jvb_A          172 KTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA-KRA---GADY---VINASMQDPLA----EIRRITESKG  240 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH-HHH---TCSE---EEETTTSCHHH----HHHHHTTTSC
T ss_pred             CEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh---CCCE---EecCCCccHHH----HHHHHhcCCC
Confidence            58999999999999999999999 99999999998887654 333   3222   24555533322    2222232 47


Q ss_pred             ccEEEEcCCC
Q 024994           79 LNILINNAAI   88 (259)
Q Consensus        79 id~vi~~ag~   88 (259)
                      +|++|+++|.
T Consensus       241 ~d~vi~~~g~  250 (347)
T 1jvb_A          241 VDAVIDLNNS  250 (347)
T ss_dssp             EEEEEESCCC
T ss_pred             ceEEEECCCC
Confidence            9999999994

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=98.09  E-value=8.5e-06  Score=69.27  Aligned_cols=101  Identities=15%  Similarity=0.164  Sum_probs=69.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC-CCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ-GKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~~i   79 (259)
                      +++||+|++|++|..+++.+...|++|+++++++++++.+. ++   +...   .+|.++.+-    .+++.+..+ .++
T Consensus       168 ~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~---ga~~---~~d~~~~~~----~~~~~~~~~~~~~  236 (343)
T 2eih_A          168 DDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-AL---GADE---TVNYTHPDW----PKEVRRLTGGKGA  236 (343)
T ss_dssp             CEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH---TCSE---EEETTSTTH----HHHHHHHTTTTCE
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc---CCCE---EEcCCcccH----HHHHHHHhCCCCc
Confidence            47999999999999999999999999999999988876553 33   3222   247665432    222333332 369


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCc
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG  140 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~  140 (259)
                      |++|+++| ..       .                  .+.+++.++.  .|+++.+++...
T Consensus       237 d~vi~~~g-~~-------~------------------~~~~~~~l~~--~G~~v~~g~~~~  269 (343)
T 2eih_A          237 DKVVDHTG-AL-------Y------------------FEGVIKATAN--GGRIAIAGASSG  269 (343)
T ss_dssp             EEEEESSC-SS-------S------------------HHHHHHHEEE--EEEEEESSCCCS
T ss_pred             eEEEECCC-HH-------H------------------HHHHHHhhcc--CCEEEEEecCCC
Confidence            99999999 21       0                  2333444443  589999988654

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.07  E-value=2.5e-05  Score=58.33  Aligned_cols=76  Identities=13%  Similarity=0.049  Sum_probs=57.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCC-hhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRN-QIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      +.++|+|+ |.+|..+++.|.+.|++|++++++ .+..+.+....   ...+.++..|.++.+.++++-      . .+.
T Consensus         4 ~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~---~~~~~~i~gd~~~~~~l~~a~------i-~~a   72 (153)
T 1id1_A            4 DHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL---GDNADVIPGDSNDSSVLKKAG------I-DRC   72 (153)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH---CTTCEEEESCTTSHHHHHHHT------T-TTC
T ss_pred             CcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh---cCCCeEEEcCCCCHHHHHHcC------h-hhC
Confidence            36889986 999999999999999999999997 45444443322   224778899999988765541      1 468


Q ss_pred             cEEEEcCC
Q 024994           80 NILINNAA   87 (259)
Q Consensus        80 d~vi~~ag   87 (259)
                      |.+|.+.+
T Consensus        73 d~vi~~~~   80 (153)
T 1id1_A           73 RAILALSD   80 (153)
T ss_dssp             SEEEECSS
T ss_pred             CEEEEecC
Confidence            99998886

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=98.06  E-value=1.4e-05  Score=68.24  Aligned_cols=77  Identities=21%  Similarity=0.260  Sum_probs=55.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      +++||+||+|+||..+++.+...|++|+++++++++++.+. ++   +...   ..|..+.+..+.+.+ .   .++++|
T Consensus       169 ~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~l---Ga~~---~~~~~~~~~~~~~~~-~---~~~g~D  237 (353)
T 4dup_A          169 ESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE-RL---GAKR---GINYRSEDFAAVIKA-E---TGQGVD  237 (353)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH---TCSE---EEETTTSCHHHHHHH-H---HSSCEE
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hc---CCCE---EEeCCchHHHHHHHH-H---hCCCce
Confidence            57999999999999999999999999999999998876543 33   3222   245554433333322 2   235799


Q ss_pred             EEEEcCCC
Q 024994           81 ILINNAAI   88 (259)
Q Consensus        81 ~vi~~ag~   88 (259)
                      ++|+++|.
T Consensus       238 vvid~~g~  245 (353)
T 4dup_A          238 IILDMIGA  245 (353)
T ss_dssp             EEEESCCG
T ss_pred             EEEECCCH
Confidence            99999994

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.03  E-value=4.3e-05  Score=63.91  Aligned_cols=79  Identities=18%  Similarity=0.153  Sum_probs=57.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCC---hhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRN---QIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ   76 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (259)
                      |++||+|+ ||.|++++..|++.|+ +|+++.|+   .++.+++.+++..... ......+..+.+...+.+        
T Consensus       149 k~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~-~~v~~~~~~~l~~~~~~l--------  218 (312)
T 3t4e_A          149 KTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTD-CVVTVTDLADQHAFTEAL--------  218 (312)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSS-CEEEEEETTCHHHHHHHH--------
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccC-cceEEechHhhhhhHhhc--------
Confidence            68999998 8999999999999998 89999999   7788887777764321 222344665543322222        


Q ss_pred             CCccEEEEcCCCC
Q 024994           77 GKLNILINNAAIA   89 (259)
Q Consensus        77 ~~id~vi~~ag~~   89 (259)
                      ...|+|||+....
T Consensus       219 ~~~DiIINaTp~G  231 (312)
T 3t4e_A          219 ASADILTNGTKVG  231 (312)
T ss_dssp             HHCSEEEECSSTT
T ss_pred             cCceEEEECCcCC
Confidence            2579999988753

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=98.02  E-value=1.9e-05  Score=67.75  Aligned_cols=97  Identities=20%  Similarity=0.248  Sum_probs=65.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCCh---hHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ---IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG   77 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (259)
                      +++||+|+ |+||..+++.+...|++|+++++++   ++.+. .+++   +  ...+  | .+  ++.+.+.+ .  . +
T Consensus       182 ~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~-~~~~---g--a~~v--~-~~--~~~~~~~~-~--~-~  245 (366)
T 2cdc_A          182 RKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTV-IEET---K--TNYY--N-SS--NGYDKLKD-S--V-G  245 (366)
T ss_dssp             CEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHH-HHHH---T--CEEE--E-CT--TCSHHHHH-H--H-C
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHH-HHHh---C--Ccee--c-hH--HHHHHHHH-h--C-C
Confidence            58999999 9999999999999999999999988   66643 3333   3  2333  5 44  22222222 1  1 4


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHH-HHHHHHhHhCCCCEEEEecCCCc
Q 024994           78 KLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLS-QLAHPLFKASGNGSIVFISSVGG  140 (259)
Q Consensus        78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~-~~~~~~~~~~~~~~ii~isS~~~  140 (259)
                      ++|++|+++|...                         .+ +.+++.++.  +|++++++...+
T Consensus       246 ~~d~vid~~g~~~-------------------------~~~~~~~~~l~~--~G~iv~~g~~~~  282 (366)
T 2cdc_A          246 KFDVIIDATGADV-------------------------NILGNVIPLLGR--NGVLGLFGFSTS  282 (366)
T ss_dssp             CEEEEEECCCCCT-------------------------HHHHHHGGGEEE--EEEEEECSCCCS
T ss_pred             CCCEEEECCCChH-------------------------HHHHHHHHHHhc--CCEEEEEecCCC
Confidence            7999999999521                         12 444555533  589999887543

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=98.02  E-value=4.5e-05  Score=62.68  Aligned_cols=73  Identities=11%  Similarity=0.190  Sum_probs=54.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++...+ .+.  ..|+.   ++.       +   +..|
T Consensus       120 ~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~-~~~--~~~~~---~~~-------~---~~~D  182 (272)
T 1p77_A          120 QHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG-NIQ--AVSMD---SIP-------L---QTYD  182 (272)
T ss_dssp             CEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS-CEE--EEEGG---GCC-------C---SCCS
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccC-CeE--EeeHH---Hhc-------c---CCCC
Confidence            68999998 799999999999999999999999999888877765322 222  23331   100       0   3699


Q ss_pred             EEEEcCCCCC
Q 024994           81 ILINNAAIAF   90 (259)
Q Consensus        81 ~vi~~ag~~~   90 (259)
                      +|||+++...
T Consensus       183 ivIn~t~~~~  192 (272)
T 1p77_A          183 LVINATSAGL  192 (272)
T ss_dssp             EEEECCCC--
T ss_pred             EEEECCCCCC
Confidence            9999999753

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=98.01  E-value=1.1e-05  Score=68.32  Aligned_cols=77  Identities=14%  Similarity=0.155  Sum_probs=54.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC-CCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ-GKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~~i   79 (259)
                      +++||+||+|+||..+++.+...|++|+++++++++++.+ +++   +...   ..|..+.+..    +++.+..+ ..+
T Consensus       150 ~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~---ga~~---~~~~~~~~~~----~~~~~~~~~~g~  218 (334)
T 3qwb_A          150 DYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIA-KEY---GAEY---LINASKEDIL----RQVLKFTNGKGV  218 (334)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT---TCSE---EEETTTSCHH----HHHHHHTTTSCE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc---CCcE---EEeCCCchHH----HHHHHHhCCCCc
Confidence            5799999999999999999999999999999998887643 332   3222   2355443322    23333332 369


Q ss_pred             cEEEEcCCC
Q 024994           80 NILINNAAI   88 (259)
Q Consensus        80 d~vi~~ag~   88 (259)
                      |++|+++|.
T Consensus       219 D~vid~~g~  227 (334)
T 3qwb_A          219 DASFDSVGK  227 (334)
T ss_dssp             EEEEECCGG
T ss_pred             eEEEECCCh
Confidence            999999994

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.00  E-value=2.9e-05  Score=66.58  Aligned_cols=71  Identities=20%  Similarity=0.163  Sum_probs=58.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+|+|.|+ |++|+.+++.|.+ .++|.+.+++.++++...       ..+..+.+|++|.+++.++++        +.|
T Consensus        17 mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~-------~~~~~~~~d~~d~~~l~~~~~--------~~D   79 (365)
T 3abi_A           17 MKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK-------EFATPLKVDASNFDKLVEVMK--------EFE   79 (365)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT-------TTSEEEECCTTCHHHHHHHHT--------TCS
T ss_pred             cEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh-------ccCCcEEEecCCHHHHHHHHh--------CCC
Confidence            57999998 9999999999865 579999999988876542       245667899999998887763        689


Q ss_pred             EEEEcCCC
Q 024994           81 ILINNAAI   88 (259)
Q Consensus        81 ~vi~~ag~   88 (259)
                      +||++++.
T Consensus        80 vVi~~~p~   87 (365)
T 3abi_A           80 LVIGALPG   87 (365)
T ss_dssp             EEEECCCG
T ss_pred             EEEEecCC
Confidence            99999874

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.97  E-value=0.00012  Score=62.61  Aligned_cols=74  Identities=18%  Similarity=0.221  Sum_probs=54.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      ++++|+|+ |++|+++++.+...|++|++++|+.++++.+.+....   .+.   .+..+.+++.+.+        ...|
T Consensus       168 ~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~---~~~---~~~~~~~~~~~~~--------~~~D  232 (361)
T 1pjc_A          168 GKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS---RVE---LLYSNSAEIETAV--------AEAD  232 (361)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG---GSE---EEECCHHHHHHHH--------HTCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCc---eeE---eeeCCHHHHHHHH--------cCCC
Confidence            58999999 9999999999999999999999999888766543321   221   1223444433322        2689


Q ss_pred             EEEEcCCCC
Q 024994           81 ILINNAAIA   89 (259)
Q Consensus        81 ~vi~~ag~~   89 (259)
                      ++|++++..
T Consensus       233 vVI~~~~~~  241 (361)
T 1pjc_A          233 LLIGAVLVP  241 (361)
T ss_dssp             EEEECCCCT
T ss_pred             EEEECCCcC
Confidence            999999864

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.96  E-value=2.3e-05  Score=66.02  Aligned_cols=77  Identities=13%  Similarity=0.117  Sum_probs=55.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC-CCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ-GKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~~i   79 (259)
                      +++||+||+|+||..+++.+...|++|+++++++++++.+. ++   +...   ..|..+.+..+    ++.+..+ ..+
T Consensus       142 ~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~---Ga~~---~~~~~~~~~~~----~~~~~~~~~g~  210 (325)
T 3jyn_A          142 EIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-AL---GAWE---TIDYSHEDVAK----RVLELTDGKKC  210 (325)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH---TCSE---EEETTTSCHHH----HHHHHTTTCCE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCCE---EEeCCCccHHH----HHHHHhCCCCc
Confidence            57999999999999999999999999999999998876543 33   3222   23555433332    3333332 369


Q ss_pred             cEEEEcCCC
Q 024994           80 NILINNAAI   88 (259)
Q Consensus        80 d~vi~~ag~   88 (259)
                      |++|+++|.
T Consensus       211 Dvvid~~g~  219 (325)
T 3jyn_A          211 PVVYDGVGQ  219 (325)
T ss_dssp             EEEEESSCG
T ss_pred             eEEEECCCh
Confidence            999999994

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.94  E-value=2.7e-05  Score=66.15  Aligned_cols=76  Identities=21%  Similarity=0.251  Sum_probs=53.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC-Cc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG-KL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~-~i   79 (259)
                      +++||+|++|+||..+++.+...|++|++++++.++.+.+. ++   +... .  .|..  ++   ..+++.+..++ ++
T Consensus       161 ~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~---ga~~-v--~~~~--~~---~~~~v~~~~~~~g~  228 (342)
T 4eye_A          161 ETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVK-SV---GADI-V--LPLE--EG---WAKAVREATGGAGV  228 (342)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HH---TCSE-E--EESS--TT---HHHHHHHHTTTSCE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hc---CCcE-E--ecCc--hh---HHHHHHHHhCCCCc
Confidence            47999999999999999999999999999999998875443 33   3222 2  2333  22   23333333333 69


Q ss_pred             cEEEEcCCC
Q 024994           80 NILINNAAI   88 (259)
Q Consensus        80 d~vi~~ag~   88 (259)
                      |++|+++|.
T Consensus       229 Dvvid~~g~  237 (342)
T 4eye_A          229 DMVVDPIGG  237 (342)
T ss_dssp             EEEEESCC-
T ss_pred             eEEEECCch
Confidence            999999994

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.94  E-value=2.2e-05  Score=66.61  Aligned_cols=77  Identities=19%  Similarity=0.128  Sum_probs=55.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC-CCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ-GKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~~i   79 (259)
                      +++||+|++|+||..+++.+...|++|+++++++++++.+. ++   +....   .|..+.+..    +++.+..+ ..+
T Consensus       146 ~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~l---ga~~~---~~~~~~~~~----~~~~~~~~~~g~  214 (340)
T 3gms_A          146 DVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELL-RL---GAAYV---IDTSTAPLY----ETVMELTNGIGA  214 (340)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HH---TCSEE---EETTTSCHH----HHHHHHTTTSCE
T ss_pred             CEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hC---CCcEE---EeCCcccHH----HHHHHHhCCCCC
Confidence            48999999999999999999999999999999998876543 33   32322   355443322    23333332 369


Q ss_pred             cEEEEcCCC
Q 024994           80 NILINNAAI   88 (259)
Q Consensus        80 d~vi~~ag~   88 (259)
                      |++|+++|.
T Consensus       215 Dvvid~~g~  223 (340)
T 3gms_A          215 DAAIDSIGG  223 (340)
T ss_dssp             EEEEESSCH
T ss_pred             cEEEECCCC
Confidence            999999994

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.90  E-value=6.3e-05  Score=66.43  Aligned_cols=83  Identities=11%  Similarity=0.139  Sum_probs=61.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEE--ec--------CCCHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSV--CD--------LSSREQREKLIET   70 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~--~D--------~~~~~~~~~~~~~   70 (259)
                      ++|||+|++|+||...++.+...|++|+++++++++++.+ +++   +....+..  .|        .++.++++++.++
T Consensus       230 ~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~-~~l---Ga~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~  305 (456)
T 3krt_A          230 DNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC-RAM---GAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKR  305 (456)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHH---TCCEEEETTTTTCCSEEETTEECHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH-Hhh---CCcEEEecCcCcccccccccccchHHHHHHHHH
Confidence            4799999999999999999999999999999988887654 343   32222111  11        2456677777777


Q ss_pred             HHHHcCC-CccEEEEcCC
Q 024994           71 VTSIFQG-KLNILINNAA   87 (259)
Q Consensus        71 ~~~~~~~-~id~vi~~ag   87 (259)
                      +.+..++ .+|++|.++|
T Consensus       306 i~~~t~g~g~Dvvid~~G  323 (456)
T 3krt_A          306 IRELTGGEDIDIVFEHPG  323 (456)
T ss_dssp             HHHHHTSCCEEEEEECSC
T ss_pred             HHHHhCCCCCcEEEEcCC
Confidence            7776643 6999999998

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.89  E-value=5.1e-05  Score=64.94  Aligned_cols=76  Identities=9%  Similarity=0.113  Sum_probs=53.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      +++||+||+|+||..+++.+...|++|+++++++++++.+. +   .+....   .|..+. ++.+.   +.+..++++|
T Consensus       165 ~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~-~---~Ga~~~---~~~~~~-~~~~~---~~~~~~~g~D  233 (362)
T 2c0c_A          165 KKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLK-S---LGCDRP---INYKTE-PVGTV---LKQEYPEGVD  233 (362)
T ss_dssp             CEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-H---TTCSEE---EETTTS-CHHHH---HHHHCTTCEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-H---cCCcEE---EecCCh-hHHHH---HHHhcCCCCC
Confidence            47999999999999999999999999999999988775543 2   233221   344432 22222   2223334699


Q ss_pred             EEEEcCC
Q 024994           81 ILINNAA   87 (259)
Q Consensus        81 ~vi~~ag   87 (259)
                      ++|+++|
T Consensus       234 ~vid~~g  240 (362)
T 2c0c_A          234 VVYESVG  240 (362)
T ss_dssp             EEEECSC
T ss_pred             EEEECCC
Confidence            9999998

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.89  E-value=4.1e-05  Score=60.63  Aligned_cols=74  Identities=14%  Similarity=0.047  Sum_probs=59.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+++|+|+ |.+|.++++.|.++|+.|++++++++..+.+.+..     .+.++..|.++.+.++++-      . .+.|
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~-----~~~~i~gd~~~~~~l~~a~------i-~~ad   67 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL-----KATIIHGDGSHKEILRDAE------V-SKND   67 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS-----SSEEEESCTTSHHHHHHHT------C-CTTC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc-----CCeEEEcCCCCHHHHHhcC------c-ccCC
Confidence            57899997 99999999999999999999999998877654331     4567889999987766441      1 4789


Q ss_pred             EEEEcCC
Q 024994           81 ILINNAA   87 (259)
Q Consensus        81 ~vi~~ag   87 (259)
                      ++|.+.+
T Consensus        68 ~vi~~~~   74 (218)
T 3l4b_C           68 VVVILTP   74 (218)
T ss_dssp             EEEECCS
T ss_pred             EEEEecC
Confidence            9998776

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.88  E-value=5e-05  Score=55.82  Aligned_cols=72  Identities=15%  Similarity=0.074  Sum_probs=57.7

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCccE
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNI   81 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~   81 (259)
                      .++|.|+ |.+|..+++.|.+.|++|++++++++..+.+.+      ..+.++..|.++.+.++++-      . .+.|.
T Consensus         9 ~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~------~g~~~i~gd~~~~~~l~~a~------i-~~ad~   74 (140)
T 3fwz_A            9 HALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE------RGVRAVLGNAANEEIMQLAH------L-ECAKW   74 (140)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH------TTCEEEESCTTSHHHHHHTT------G-GGCSE
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH------cCCCEEECCCCCHHHHHhcC------c-ccCCE
Confidence            5889987 889999999999999999999999988766542      14567889999987765531      1 36899


Q ss_pred             EEEcCC
Q 024994           82 LINNAA   87 (259)
Q Consensus        82 vi~~ag   87 (259)
                      +|.+.+
T Consensus        75 vi~~~~   80 (140)
T 3fwz_A           75 LILTIP   80 (140)
T ss_dssp             EEECCS
T ss_pred             EEEECC
Confidence            988876

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.84  E-value=0.00015  Score=62.40  Aligned_cols=74  Identities=18%  Similarity=0.171  Sum_probs=54.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+++|+|+ |+||..+++.+...|++|++++|+.++++.+.+.+   +..+   ..+.++.+++.+.+.        ..|
T Consensus       169 ~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~---g~~~---~~~~~~~~~l~~~l~--------~aD  233 (377)
T 2vhw_A          169 ADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF---CGRI---HTRYSSAYELEGAVK--------RAD  233 (377)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TTSS---EEEECCHHHHHHHHH--------HCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc---CCee---EeccCCHHHHHHHHc--------CCC
Confidence            68999998 99999999999999999999999998876654332   2222   233445555544432        579


Q ss_pred             EEEEcCCCC
Q 024994           81 ILINNAAIA   89 (259)
Q Consensus        81 ~vi~~ag~~   89 (259)
                      +||++++..
T Consensus       234 vVi~~~~~p  242 (377)
T 2vhw_A          234 LVIGAVLVP  242 (377)
T ss_dssp             EEEECCCCT
T ss_pred             EEEECCCcC
Confidence            999999864

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.83  E-value=3.7e-05  Score=64.00  Aligned_cols=73  Identities=16%  Similarity=0.187  Sum_probs=53.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+++.....       ++.+.+++       .+.. ...
T Consensus       142 ~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~-------~~~~~~~~-------~~~~-~~a  205 (297)
T 2egg_A          142 KRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRS-------AYFSLAEA-------ETRL-AEY  205 (297)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSC-------CEECHHHH-------HHTG-GGC
T ss_pred             CEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccC-------ceeeHHHH-------Hhhh-ccC
Confidence            68999998 7999999999999998 999999999988877765432111       11122222       2222 468


Q ss_pred             cEEEEcCCCC
Q 024994           80 NILINNAAIA   89 (259)
Q Consensus        80 d~vi~~ag~~   89 (259)
                      |+|||+.+..
T Consensus       206 DivIn~t~~~  215 (297)
T 2egg_A          206 DIIINTTSVG  215 (297)
T ss_dssp             SEEEECSCTT
T ss_pred             CEEEECCCCC
Confidence            9999999865

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.79  E-value=6.5e-05  Score=64.39  Aligned_cols=73  Identities=22%  Similarity=0.304  Sum_probs=53.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      +++||+|+ |+||..+++.+...|++|+++++++++.+...+++   +...   ..|..+.+.+.       +.. +.+|
T Consensus       189 ~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~l---Ga~~---v~~~~~~~~~~-------~~~-~~~D  253 (366)
T 1yqd_A          189 KHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNF---GADS---FLVSRDQEQMQ-------AAA-GTLD  253 (366)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTS---CCSE---EEETTCHHHHH-------HTT-TCEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---CCce---EEeccCHHHHH-------Hhh-CCCC
Confidence            47999996 99999999999999999999999988876544332   3222   24666643322       222 4799


Q ss_pred             EEEEcCCC
Q 024994           81 ILINNAAI   88 (259)
Q Consensus        81 ~vi~~ag~   88 (259)
                      ++|+++|.
T Consensus       254 ~vid~~g~  261 (366)
T 1yqd_A          254 GIIDTVSA  261 (366)
T ss_dssp             EEEECCSS
T ss_pred             EEEECCCc
Confidence            99999995

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.78  E-value=0.00011  Score=62.38  Aligned_cols=78  Identities=10%  Similarity=0.077  Sum_probs=54.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      +++||+||+|+||..+++.+...|++|+++++++++++.+. ++   +...   ..|..+.+..+. +.+....  ..+|
T Consensus       166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~---Ga~~---~~~~~~~~~~~~-v~~~~~~--~g~D  235 (349)
T 3pi7_A          166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DI---GAAH---VLNEKAPDFEAT-LREVMKA--EQPR  235 (349)
T ss_dssp             SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HH---TCSE---EEETTSTTHHHH-HHHHHHH--HCCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCCE---EEECCcHHHHHH-HHHHhcC--CCCc
Confidence            57999999999999999999999999999999998876543 33   3222   235544332222 2222221  2699


Q ss_pred             EEEEcCCC
Q 024994           81 ILINNAAI   88 (259)
Q Consensus        81 ~vi~~ag~   88 (259)
                      ++|+++|.
T Consensus       236 ~vid~~g~  243 (349)
T 3pi7_A          236 IFLDAVTG  243 (349)
T ss_dssp             EEEESSCH
T ss_pred             EEEECCCC
Confidence            99999984

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.77  E-value=8.7e-05  Score=62.99  Aligned_cols=74  Identities=23%  Similarity=0.363  Sum_probs=50.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      +++||+||+|+||..+++.+...|++|+++ +++++++.+ +++   +...    +| .+. +..+.+.+...  +..+|
T Consensus       152 ~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~-~~l---Ga~~----i~-~~~-~~~~~~~~~~~--~~g~D  218 (343)
T 3gaz_A          152 QTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYV-RDL---GATP----ID-ASR-EPEDYAAEHTA--GQGFD  218 (343)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHH-HHH---TSEE----EE-TTS-CHHHHHHHHHT--TSCEE
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHH-HHc---CCCE----ec-cCC-CHHHHHHHHhc--CCCce
Confidence            479999999999999999999999999999 777776543 333   3222    34 322 22222222211  13699


Q ss_pred             EEEEcCC
Q 024994           81 ILINNAA   87 (259)
Q Consensus        81 ~vi~~ag   87 (259)
                      ++|+++|
T Consensus       219 ~vid~~g  225 (343)
T 3gaz_A          219 LVYDTLG  225 (343)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999998

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.75  E-value=3.1e-05  Score=57.92  Aligned_cols=74  Identities=14%  Similarity=0.101  Sum_probs=54.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      ++++|+|+ |.+|..+++.|.+.|++|++++|++++.+.+..   .  ....++..|.++.+.+.++      .. ...|
T Consensus        20 ~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~--~g~~~~~~d~~~~~~l~~~------~~-~~ad   86 (155)
T 2g1u_A           20 KYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---E--FSGFTVVGDAAEFETLKEC------GM-EKAD   86 (155)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---T--CCSEEEESCTTSHHHHHTT------TG-GGCS
T ss_pred             CcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---c--CCCcEEEecCCCHHHHHHc------Cc-ccCC
Confidence            47899996 999999999999999999999999887654310   1  1344566888876543321      01 3689


Q ss_pred             EEEEcCC
Q 024994           81 ILINNAA   87 (259)
Q Consensus        81 ~vi~~ag   87 (259)
                      +||.+.+
T Consensus        87 ~Vi~~~~   93 (155)
T 2g1u_A           87 MVFAFTN   93 (155)
T ss_dssp             EEEECSS
T ss_pred             EEEEEeC
Confidence            9999987

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.73  E-value=0.0002  Score=59.01  Aligned_cols=71  Identities=14%  Similarity=0.203  Sum_probs=54.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+++...+ .+....  +.+   +          . ...
T Consensus       127 k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~-~~~~~~--~~~---l----------~-~~a  188 (281)
T 3o8q_A          127 ATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG-EVKAQA--FEQ---L----------K-QSY  188 (281)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS-CEEEEE--GGG---C----------C-SCE
T ss_pred             CEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC-CeeEee--HHH---h----------c-CCC
Confidence            68999998 7999999999999996 99999999999988888776433 333332  211   0          0 368


Q ss_pred             cEEEEcCCCC
Q 024994           80 NILINNAAIA   89 (259)
Q Consensus        80 d~vi~~ag~~   89 (259)
                      |+|||+....
T Consensus       189 DiIInaTp~g  198 (281)
T 3o8q_A          189 DVIINSTSAS  198 (281)
T ss_dssp             EEEEECSCCC
T ss_pred             CEEEEcCcCC
Confidence            9999998754

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.71  E-value=0.00017  Score=61.33  Aligned_cols=101  Identities=14%  Similarity=0.231  Sum_probs=66.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC-C
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG-K   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~-~   78 (259)
                      +++||+|+ |++|..+++.+...|+ +|+++++++++++.+ +++   +...   ..|..+.+    +.+++.+..++ .
T Consensus       169 ~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~-~~~---Ga~~---~~~~~~~~----~~~~v~~~~~g~g  236 (348)
T 2d8a_A          169 KSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELA-KKV---GADY---VINPFEED----VVKEVMDITDGNG  236 (348)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHH-HHH---TCSE---EECTTTSC----HHHHHHHHTTTSC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh---CCCE---EECCCCcC----HHHHHHHHcCCCC
Confidence            47999999 9999999999999999 999999998877544 333   3221   13544422    22333333322 6


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCc
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG  140 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~  140 (259)
                      +|++|+++|..          +               .++.+++.++.  .|+++.+++...
T Consensus       237 ~D~vid~~g~~----------~---------------~~~~~~~~l~~--~G~iv~~g~~~~  271 (348)
T 2d8a_A          237 VDVFLEFSGAP----------K---------------ALEQGLQAVTP--AGRVSLLGLYPG  271 (348)
T ss_dssp             EEEEEECSCCH----------H---------------HHHHHHHHEEE--EEEEEECCCCSS
T ss_pred             CCEEEECCCCH----------H---------------HHHHHHHHHhc--CCEEEEEccCCC
Confidence            99999999841          1               22344455543  589999987543

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.69  E-value=0.00012  Score=61.90  Aligned_cols=100  Identities=17%  Similarity=0.175  Sum_probs=67.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      +++||+|+ |++|..+++.+...|++|+++++++++++.+. ++   +...   ..|.++.+ +.   +++.+.. +.+|
T Consensus       166 ~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~l---Ga~~---~~d~~~~~-~~---~~~~~~~-~~~d  232 (339)
T 1rjw_A          166 EWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-EL---GADL---VVNPLKED-AA---KFMKEKV-GGVH  232 (339)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HT---TCSE---EECTTTSC-HH---HHHHHHH-SSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HC---CCCE---EecCCCcc-HH---HHHHHHh-CCCC
Confidence            47999999 88999999999999999999999988876542 22   3221   24666532 22   2222223 4799


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCc
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG  140 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~  140 (259)
                      ++|+++|..          +               ..+.+++.++.  .|+++.+++...
T Consensus       233 ~vid~~g~~----------~---------------~~~~~~~~l~~--~G~~v~~g~~~~  265 (339)
T 1rjw_A          233 AAVVTAVSK----------P---------------AFQSAYNSIRR--GGACVLVGLPPE  265 (339)
T ss_dssp             EEEESSCCH----------H---------------HHHHHHHHEEE--EEEEEECCCCSS
T ss_pred             EEEECCCCH----------H---------------HHHHHHHHhhc--CCEEEEecccCC
Confidence            999999841          1               12334444443  589999887543

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.68  E-value=7.2e-05  Score=57.46  Aligned_cols=73  Identities=15%  Similarity=0.172  Sum_probs=55.0

Q ss_pred             EEEEEcCcchHHHHHHHHHHHC-CCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            2 TALVTGGTRGIGHATVEELARF-GAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      +++|.|+ |.+|..+++.|.+. |++|+++++++++.+.+.    ..  .+..+..|.++.+.+.++.     .. .+.|
T Consensus        41 ~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~----~~--g~~~~~gd~~~~~~l~~~~-----~~-~~ad  107 (183)
T 3c85_A           41 QVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQHR----SE--GRNVISGDATDPDFWERIL-----DT-GHVK  107 (183)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHH----HT--TCCEEECCTTCHHHHHTBC-----SC-CCCC
T ss_pred             cEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHH----HC--CCCEEEcCCCCHHHHHhcc-----CC-CCCC
Confidence            5788985 99999999999999 999999999998776543    22  3455678999876544320     01 4689


Q ss_pred             EEEEcCC
Q 024994           81 ILINNAA   87 (259)
Q Consensus        81 ~vi~~ag   87 (259)
                      +||.+.+
T Consensus       108 ~vi~~~~  114 (183)
T 3c85_A          108 LVLLAMP  114 (183)
T ss_dssp             EEEECCS
T ss_pred             EEEEeCC
Confidence            9998876

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.67  E-value=0.00021  Score=60.73  Aligned_cols=76  Identities=13%  Similarity=0.187  Sum_probs=53.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      +++||+||+|++|..+++.+...|++|+++++++++++.+. ++   +....   .|..+  +   ..+++.+..++.+|
T Consensus       152 ~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~l---Ga~~v---i~~~~--~---~~~~~~~~~~~g~D  219 (346)
T 3fbg_A          152 KTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTK-KM---GADIV---LNHKE--S---LLNQFKTQGIELVD  219 (346)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHH-HH---TCSEE---ECTTS--C---HHHHHHHHTCCCEE
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hc---CCcEE---EECCc--c---HHHHHHHhCCCCcc
Confidence            47999999999999999999999999999999988876543 33   32221   23332  2   22333333334799


Q ss_pred             EEEEcCCC
Q 024994           81 ILINNAAI   88 (259)
Q Consensus        81 ~vi~~ag~   88 (259)
                      ++|+++|.
T Consensus       220 vv~d~~g~  227 (346)
T 3fbg_A          220 YVFCTFNT  227 (346)
T ss_dssp             EEEESSCH
T ss_pred             EEEECCCc
Confidence            99999984

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.64  E-value=0.00066  Score=57.89  Aligned_cols=80  Identities=18%  Similarity=0.125  Sum_probs=56.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCE-EEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC-CC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAI-VHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ-GK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~~   78 (259)
                      +++||+|+ |++|...++.+...|++ |+++++++++++.+. ++   ...+.....|-.+.+++.+   ++.+..+ ..
T Consensus       181 ~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l---~~~~~~~~~~~~~~~~~~~---~v~~~t~g~g  252 (363)
T 3m6i_A          181 DPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAK-EI---CPEVVTHKVERLSAEESAK---KIVESFGGIE  252 (363)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHH-HH---CTTCEEEECCSCCHHHHHH---HHHHHTSSCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh---chhcccccccccchHHHHH---HHHHHhCCCC
Confidence            46899998 99999999999999997 999999998876543 33   2234444455555555443   3334332 36


Q ss_pred             ccEEEEcCCC
Q 024994           79 LNILINNAAI   88 (259)
Q Consensus        79 id~vi~~ag~   88 (259)
                      +|++|.++|.
T Consensus       253 ~Dvvid~~g~  262 (363)
T 3m6i_A          253 PAVALECTGV  262 (363)
T ss_dssp             CSEEEECSCC
T ss_pred             CCEEEECCCC
Confidence            9999999984

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.64  E-value=4.1e-05  Score=56.51  Aligned_cols=70  Identities=13%  Similarity=0.109  Sum_probs=52.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+++|.|+ |++|..+++.|.+.|++|++++|+.++.+.+.+++.     ...  .+..+.+   ..+        ...|
T Consensus        22 ~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~-----~~~--~~~~~~~---~~~--------~~~D   82 (144)
T 3oj0_A           22 NKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYE-----YEY--VLINDID---SLI--------KNND   82 (144)
T ss_dssp             CEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHT-----CEE--EECSCHH---HHH--------HTCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhC-----Cce--EeecCHH---HHh--------cCCC
Confidence            68999997 999999999999999999999999998887766652     111  1233322   222        2589


Q ss_pred             EEEEcCCCC
Q 024994           81 ILINNAAIA   89 (259)
Q Consensus        81 ~vi~~ag~~   89 (259)
                      +||++.+..
T Consensus        83 ivi~at~~~   91 (144)
T 3oj0_A           83 VIITATSSK   91 (144)
T ss_dssp             EEEECSCCS
T ss_pred             EEEEeCCCC
Confidence            999998854

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.63  E-value=0.00047  Score=55.80  Aligned_cols=77  Identities=16%  Similarity=0.204  Sum_probs=57.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCCh-------------------hHHHHHHHHHHhc--CCcEEEEEecC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQ-------------------IELDARLHEWKNK--GFKVTGSVCDL   58 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~--~~~~~~~~~D~   58 (259)
                      ++|+|.|+ ||+|.++++.|+..|. ++++++++.                   .+.+.+.+.+...  ..++..+..++
T Consensus        32 ~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~  110 (249)
T 1jw9_B           32 SRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALL  110 (249)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred             CeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEeccC
Confidence            57999997 8999999999999997 899999987                   6777777777653  33455555556


Q ss_pred             CCHHHHHHHHHHHHHHcCCCccEEEEcCC
Q 024994           59 SSREQREKLIETVTSIFQGKLNILINNAA   87 (259)
Q Consensus        59 ~~~~~~~~~~~~~~~~~~~~id~vi~~ag   87 (259)
                      ++ +.+.+++        ...|+||.+..
T Consensus       111 ~~-~~~~~~~--------~~~DvVi~~~d  130 (249)
T 1jw9_B          111 DD-AELAALI--------AEHDLVLDCTD  130 (249)
T ss_dssp             CH-HHHHHHH--------HTSSEEEECCS
T ss_pred             CH-hHHHHHH--------hCCCEEEEeCC
Confidence            53 3333333        36899998865

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.60  E-value=0.00024  Score=58.22  Aligned_cols=71  Identities=15%  Similarity=0.194  Sum_probs=53.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+++..  ..+...  ++.+.+          .   ...
T Consensus       121 k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~--~~~~~~--~~~~l~----------~---~~~  182 (272)
T 3pwz_A          121 RRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH--SRLRIS--RYEALE----------G---QSF  182 (272)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC--TTEEEE--CSGGGT----------T---CCC
T ss_pred             CEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc--CCeeEe--eHHHhc----------c---cCC
Confidence            68999998 7999999999999996 999999999999888877653  233332  222110          0   368


Q ss_pred             cEEEEcCCCC
Q 024994           80 NILINNAAIA   89 (259)
Q Consensus        80 d~vi~~ag~~   89 (259)
                      |+|||+....
T Consensus       183 DivInaTp~g  192 (272)
T 3pwz_A          183 DIVVNATSAS  192 (272)
T ss_dssp             SEEEECSSGG
T ss_pred             CEEEECCCCC
Confidence            9999998653

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.59  E-value=0.0012  Score=55.34  Aligned_cols=117  Identities=15%  Similarity=0.108  Sum_probs=73.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCC--CEEEEeeCChhHHHHHHHHHHhcCCc--EEEEEecCCCHHHHHHHHHHHHHHcC
Q 024994            1 MTALVTGGTRGIGHATVEELARFG--AIVHTCSRNQIELDARLHEWKNKGFK--VTGSVCDLSSREQREKLIETVTSIFQ   76 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (259)
                      +++.|+|++|.+|..++..|+++|  ..|+++++++  .+....++......  +.... ..+|   .+.++        
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~-~t~d---~~~a~--------   66 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYL-GPEQ---LPDCL--------   66 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEE-SGGG---HHHHH--------
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEec-CCCC---HHHHh--------
Confidence            579999999999999999999998  6899999987  33334445432211  22110 0112   22222        


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCc
Q 024994           77 GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG  140 (259)
Q Consensus        77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~  140 (259)
                      ...|+||+++|......   .+.   .+.+..|+.....+.+.+..+   ..++.++++|-...
T Consensus        67 ~~aDvVvi~ag~~~~~g---~~r---~dl~~~n~~i~~~i~~~i~~~---~p~a~viv~sNPv~  121 (314)
T 1mld_A           67 KGCDVVVIPAGVPRKPG---MTR---DDLFNTNATIVATLTAACAQH---CPDAMICIISNPVN  121 (314)
T ss_dssp             TTCSEEEECCSCCCCTT---CCG---GGGHHHHHHHHHHHHHHHHHH---CTTSEEEECSSCHH
T ss_pred             CCCCEEEECCCcCCCCC---CcH---HHHHHHHHHHHHHHHHHHHhh---CCCeEEEEECCCcc
Confidence            47899999999753211   121   123567777766666665433   34578888876543

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=97.58  E-value=0.00078  Score=56.88  Aligned_cols=117  Identities=12%  Similarity=0.111  Sum_probs=73.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC--E-----EEEeeCCh--hHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA--I-----VHTCSRNQ--IELDARLHEWKNKG-FKVTGSVCDLSSREQREKLIET   70 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~--~-----V~~~~r~~--~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~   70 (259)
                      ++++||||+|+||.+++..|+..|.  .     ++++|+++  ++++-...++.... .-..-+..- ++.   .+.   
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~~~~~-~~~---~~~---   76 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIAT-DKE---EIA---   76 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEE-SCH---HHH---
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccCCEEEc-CCc---HHH---
Confidence            3799999999999999999998875  4     99999975  45555566666532 112111111 111   111   


Q ss_pred             HHHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CC-EEEEecCCC
Q 024994           71 VTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NG-SIVFISSVG  139 (259)
Q Consensus        71 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~-~ii~isS~~  139 (259)
                          + ...|+||+.||.....   ..+   -.+.++.|+.....+.+.+    .+.. ++ .++++|-..
T Consensus        77 ----~-~daDvVvitAg~prkp---G~t---R~dll~~N~~i~~~i~~~i----~~~~~~~~~vivvsNPv  132 (333)
T 5mdh_A           77 ----F-KDLDVAILVGSMPRRD---GME---RKDLLKANVKIFKCQGAAL----DKYAKKSVKVIVVGNPA  132 (333)
T ss_dssp             ----T-TTCSEEEECCSCCCCT---TCC---TTTTHHHHHHHHHHHHHHH----HHHSCTTCEEEECSSSH
T ss_pred             ----h-CCCCEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHH----HHhCCCCeEEEEcCCch
Confidence                1 4789999999965321   112   2234567777766666655    4433 35 588888754

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.54  E-value=0.00016  Score=60.17  Aligned_cols=72  Identities=15%  Similarity=0.193  Sum_probs=51.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      +++||+|++|++|..+++.+...|++|+++++++++.+.+ +++   +...   ..|..+.++   ..+++     +++|
T Consensus       127 ~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~---ga~~---~~~~~~~~~---~~~~~-----~~~d  191 (302)
T 1iz0_A          127 EKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP-LAL---GAEE---AATYAEVPE---RAKAW-----GGLD  191 (302)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH-HHT---TCSE---EEEGGGHHH---HHHHT-----TSEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hhc---CCCE---EEECCcchh---HHHHh-----cCce
Confidence            4799999999999999999999999999999998887654 222   3221   135444122   22222     4799


Q ss_pred             EEEEcCCC
Q 024994           81 ILINNAAI   88 (259)
Q Consensus        81 ~vi~~ag~   88 (259)
                      ++|+ +|.
T Consensus       192 ~vid-~g~  198 (302)
T 1iz0_A          192 LVLE-VRG  198 (302)
T ss_dssp             EEEE-CSC
T ss_pred             EEEE-CCH
Confidence            9999 884

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.45  E-value=0.00049  Score=58.75  Aligned_cols=83  Identities=14%  Similarity=0.147  Sum_probs=49.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc---CC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIF---QG   77 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~---~~   77 (259)
                      +++||+|++|++|...++.+...|++|+.+.++.+++.+..+.+.+.+....   .|..+. ....+.+++.+..   ++
T Consensus       169 ~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~v---i~~~~~-~~~~~~~~i~~~t~~~~~  244 (364)
T 1gu7_A          169 DWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQV---ITEDQN-NSREFGPTIKEWIKQSGG  244 (364)
T ss_dssp             CEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEE---EEHHHH-HCGGGHHHHHHHHHHHTC
T ss_pred             cEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEE---EecCcc-chHHHHHHHHHHhhccCC
Confidence            4799999999999999998888899999998776652222122222233221   121110 0011222333221   24


Q ss_pred             CccEEEEcCC
Q 024994           78 KLNILINNAA   87 (259)
Q Consensus        78 ~id~vi~~ag   87 (259)
                      .+|++|.++|
T Consensus       245 g~Dvvid~~G  254 (364)
T 1gu7_A          245 EAKLALNCVG  254 (364)
T ss_dssp             CEEEEEESSC
T ss_pred             CceEEEECCC
Confidence            7999999998

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.45  E-value=0.002  Score=54.70  Aligned_cols=80  Identities=25%  Similarity=0.336  Sum_probs=51.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS-REQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~i   79 (259)
                      +++||+|+ |++|..+++.+...|++|+++++++++++.+. ++   +...   ..|..+ .+..+++.+...+..+..+
T Consensus       170 ~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~l---Ga~~---~~~~~~~~~~~~~i~~~~~~~~g~g~  241 (352)
T 1e3j_A          170 TTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-NC---GADV---TLVVDPAKEEESSIIERIRSAIGDLP  241 (352)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HT---TCSE---EEECCTTTSCHHHHHHHHHHHSSSCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-Hh---CCCE---EEcCcccccHHHHHHHHhccccCCCC
Confidence            47999997 89999999999889999999999988775542 32   3332   134443 2222222222110012469


Q ss_pred             cEEEEcCCC
Q 024994           80 NILINNAAI   88 (259)
Q Consensus        80 d~vi~~ag~   88 (259)
                      |++|+++|.
T Consensus       242 D~vid~~g~  250 (352)
T 1e3j_A          242 NVTIDCSGN  250 (352)
T ss_dssp             SEEEECSCC
T ss_pred             CEEEECCCC
Confidence            999999984

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.39  E-value=0.00011  Score=61.21  Aligned_cols=82  Identities=11%  Similarity=0.015  Sum_probs=51.5

Q ss_pred             chHHHHHHHHHHHCCCEEEEeeCChhHHH--------HHHHHHHh---cCCcEEEEEecCCCHHHHHHHHHHH-------
Q 024994           10 RGIGHATVEELARFGAIVHTCSRNQIELD--------ARLHEWKN---KGFKVTGSVCDLSSREQREKLIETV-------   71 (259)
Q Consensus        10 ~giG~~~a~~l~~~G~~V~~~~r~~~~~~--------~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~-------   71 (259)
                      |-.|.++|+.++++|+.|+++.+..+...        .+.+.+..   ....+..+..|+...+++.+++.+.       
T Consensus        65 GkmG~aiAe~~~~~Ga~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~~~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~  144 (313)
T 1p9o_A           65 GRRGATSAEAFLAAGYGVLFLYRARSAFPYAHRFPPQTWLSALRPSGPALSGLLSLEAEENALPGFAEALRSYQEAAAAG  144 (313)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEEEETTSCCTTGGGSCHHHHHHHCEECCC-CCSEEEEEEETTTSTTHHHHHHHHHHHHHHT
T ss_pred             cHHHHHHHHHHHHCCCEEEEEecCCCcCcchhccCccchhhhhccccccccccceeeeccccHHHHHHHHHHHhhhhccc
Confidence            44999999999999999999988543110        00110000   1123445566666666666655443       


Q ss_pred             -----------------------HHHcCCCccEEEEcCCCCCCC
Q 024994           72 -----------------------TSIFQGKLNILINNAAIAFVK   92 (259)
Q Consensus        72 -----------------------~~~~~~~id~vi~~ag~~~~~   92 (259)
                                             .+.+ ++.|++|.+|++....
T Consensus       145 ~l~~i~f~tv~eyl~~L~~~~~~l~~~-~~~di~i~aAAVsDf~  187 (313)
T 1p9o_A          145 TFLVVEFTTLADYLHLLQAAAQALNPL-GPSAMFYLAAAVSDFY  187 (313)
T ss_dssp             CEEEEEECBHHHHHHHHHHHHHHHGGG-GGGEEEEECSBCCSEE
T ss_pred             cceeeccccHHHHHHHHHHhhHHhhcc-CCCCEEEECCchhhcc
Confidence                                   1334 5799999999997554

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.36  E-value=0.0022  Score=54.32  Aligned_cols=115  Identities=12%  Similarity=0.114  Sum_probs=71.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC--EEEEeeCChhHHHHHHHHHHhcC---CcEEEEEecCCCHHHHHHHHHHHHHHc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKG---FKVTGSVCDLSSREQREKLIETVTSIF   75 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (259)
                      +++.|+|++|.+|..++..++.+|.  .|+++|+++++++....++....   .++.+    .+|.   .+.+       
T Consensus         9 ~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~----t~d~---~~al-------   74 (343)
T 3fi9_A            9 EKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF----TSDI---KEAL-------   74 (343)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE----ESCH---HHHH-------
T ss_pred             CEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEE----cCCH---HHHh-------
Confidence            4789999999999999999999994  79999999988776666665421   11111    0122   1122       


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCE-EEEecCCC
Q 024994           76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGS-IVFISSVG  139 (259)
Q Consensus        76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~-ii~isS~~  139 (259)
                       ..-|+||.+||....   ...+   -.+.++.|..-...+.+.+..+   ..++. ++++|...
T Consensus        75 -~dADvVvitaG~p~k---pG~~---R~dLl~~N~~I~~~i~~~i~~~---~p~a~~vlvvsNPv  129 (343)
T 3fi9_A           75 -TDAKYIVSSGGAPRK---EGMT---REDLLKGNAEIAAQLGKDIKSY---CPDCKHVIIIFNPA  129 (343)
T ss_dssp             -TTEEEEEECCC----------C---HHHHHHHHHHHHHHHHHHHHHH---CTTCCEEEECSSSH
T ss_pred             -CCCCEEEEccCCCCC---CCCC---HHHHHHHHHHHHHHHHHHHHHh---ccCcEEEEEecCch
Confidence             478999999996421   1122   2345667776666665555322   23453 67777654

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.34  E-value=0.0019  Score=52.70  Aligned_cols=65  Identities=22%  Similarity=0.219  Sum_probs=50.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+++|.|+ ||.|++++..|++.|.+|+++.|+.++.+++. ++.     +..  .+..+              . ...|
T Consensus       119 k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~-----~~~--~~~~~--------------l-~~~D  174 (269)
T 3phh_A          119 QNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLG-----CDC--FMEPP--------------K-SAFD  174 (269)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHT-----CEE--ESSCC--------------S-SCCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCC-----CeE--ecHHH--------------h-ccCC
Confidence            68999997 99999999999999999999999999988876 542     222  22222              1 2589


Q ss_pred             EEEEcCCCC
Q 024994           81 ILINNAAIA   89 (259)
Q Consensus        81 ~vi~~ag~~   89 (259)
                      +|||+....
T Consensus       175 iVInaTp~G  183 (269)
T 3phh_A          175 LIINATSAS  183 (269)
T ss_dssp             EEEECCTTC
T ss_pred             EEEEcccCC
Confidence            999997654

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.33  E-value=0.002  Score=53.27  Aligned_cols=86  Identities=14%  Similarity=0.241  Sum_probs=60.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCCh------------------hHHHHHHHHHHhc--CCcEEEEEecCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQ------------------IELDARLHEWKNK--GFKVTGSVCDLS   59 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~------------------~~~~~~~~~~~~~--~~~~~~~~~D~~   59 (259)
                      ++|+|.|+ ||+|.++++.|+..|. ++.++|.+.                  .+.+.+.+.+...  ..++..+..+++
T Consensus        37 ~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~~~l~  115 (292)
T 3h8v_A           37 FAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNYNIT  115 (292)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEECCCTT
T ss_pred             CeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEecccCC
Confidence            47899988 8999999999999996 899998776                  5555555555543  345666667787


Q ss_pred             CHHHHHHHHHHHHHHc---CCCccEEEEcCC
Q 024994           60 SREQREKLIETVTSIF---QGKLNILINNAA   87 (259)
Q Consensus        60 ~~~~~~~~~~~~~~~~---~~~id~vi~~ag   87 (259)
                      +.+.++.+++.+....   ....|+||.+.-
T Consensus       116 ~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D  146 (292)
T 3h8v_A          116 TVENFQHFMDRISNGGLEEGKPVDLVLSCVD  146 (292)
T ss_dssp             SHHHHHHHHHHHHHBSSSTTBCCSEEEECCS
T ss_pred             cHHHHHHHhhhhcccccccCCCCCEEEECCc
Confidence            7677766665443210   025888887654

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.32  E-value=0.00035  Score=55.80  Aligned_cols=71  Identities=10%  Similarity=-0.041  Sum_probs=55.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      +.++|.|+ |.+|..+++.|.++|+ |++++++++..+.+.       ..+.++.+|.++.+.++++-      . ...|
T Consensus        10 ~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-------~~~~~i~gd~~~~~~l~~a~------i-~~ad   73 (234)
T 2aef_A           10 RHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR-------SGANFVHGDPTRVSDLEKAN------V-RGAR   73 (234)
T ss_dssp             CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-------TTCEEEESCTTCHHHHHHTT------C-TTCS
T ss_pred             CEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-------cCCeEEEcCCCCHHHHHhcC------c-chhc
Confidence            46899998 8999999999999999 999999988765442       24778889999987665541      1 4688


Q ss_pred             EEEEcCC
Q 024994           81 ILINNAA   87 (259)
Q Consensus        81 ~vi~~ag   87 (259)
                      .+|.+.+
T Consensus        74 ~vi~~~~   80 (234)
T 2aef_A           74 AVIVDLE   80 (234)
T ss_dssp             EEEECCS
T ss_pred             EEEEcCC
Confidence            8888765

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.31  E-value=0.00066  Score=57.45  Aligned_cols=75  Identities=15%  Similarity=0.174  Sum_probs=51.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      +++||+|+ |++|..+++.+...|+ +|+++++++++++.+. ++    ..   ...|..+. ++.+.+.++   .+..+
T Consensus       166 ~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~l----a~---~v~~~~~~-~~~~~~~~~---~~~g~  232 (343)
T 2dq4_A          166 KSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFAR-PY----AD---RLVNPLEE-DLLEVVRRV---TGSGV  232 (343)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGT-TT----CS---EEECTTTS-CHHHHHHHH---HSSCE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh----HH---hccCcCcc-CHHHHHHHh---cCCCC
Confidence            47999999 9999999999999999 9999999987765432 11    11   12455442 222233332   23479


Q ss_pred             cEEEEcCCC
Q 024994           80 NILINNAAI   88 (259)
Q Consensus        80 d~vi~~ag~   88 (259)
                      |++|.++|.
T Consensus       233 D~vid~~g~  241 (343)
T 2dq4_A          233 EVLLEFSGN  241 (343)
T ss_dssp             EEEEECSCC
T ss_pred             CEEEECCCC
Confidence            999999984

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.31  E-value=0.001  Score=56.85  Aligned_cols=75  Identities=17%  Similarity=0.155  Sum_probs=52.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC-Cc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG-KL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~-~i   79 (259)
                      +++||+| +|++|...++.+...|++|+++++++++++.+ +++   +....   .| .+.+++.+.+.   +..++ .+
T Consensus       191 ~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~l---Ga~~v---i~-~~~~~~~~~v~---~~~~g~g~  258 (363)
T 3uog_A          191 DRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA-FAL---GADHG---IN-RLEEDWVERVY---ALTGDRGA  258 (363)
T ss_dssp             CEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH---TCSEE---EE-TTTSCHHHHHH---HHHTTCCE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH-HHc---CCCEE---Ec-CCcccHHHHHH---HHhCCCCc
Confidence            4799999 89999999999999999999999998887653 333   33222   24 33223222232   22223 69


Q ss_pred             cEEEEcCC
Q 024994           80 NILINNAA   87 (259)
Q Consensus        80 d~vi~~ag   87 (259)
                      |++|.++|
T Consensus       259 D~vid~~g  266 (363)
T 3uog_A          259 DHILEIAG  266 (363)
T ss_dssp             EEEEEETT
T ss_pred             eEEEECCC
Confidence            99999998

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.30  E-value=0.00054  Score=53.73  Aligned_cols=43  Identities=28%  Similarity=0.400  Sum_probs=38.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE   43 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~   43 (259)
                      |+++|+||+|.+|.++++.|+++|++|++++|+.++.+.+.++
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~   43 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAE   43 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHH
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            5789999999999999999999999999999998887665543

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.27  E-value=0.00036  Score=58.65  Aligned_cols=75  Identities=23%  Similarity=0.224  Sum_probs=50.2

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCccE
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNI   81 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~   81 (259)
                      ++||+|++|++|..+++.+...|++|+.+++++++++.+ +++   +....   .|..+.+  .+.++++   .++.+|+
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~-~~l---Ga~~~---i~~~~~~--~~~~~~~---~~~~~d~  219 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL-RVL---GAKEV---LAREDVM--AERIRPL---DKQRWAA  219 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH-HHT---TCSEE---EECC-----------C---CSCCEEE
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHc---CCcEE---EecCCcH--HHHHHHh---cCCcccE
Confidence            699999999999999999999999999999998877554 232   32221   3544432  1222222   2246999


Q ss_pred             EEEcCCC
Q 024994           82 LINNAAI   88 (259)
Q Consensus        82 vi~~ag~   88 (259)
                      +|+++|.
T Consensus       220 vid~~g~  226 (328)
T 1xa0_A          220 AVDPVGG  226 (328)
T ss_dssp             EEECSTT
T ss_pred             EEECCcH
Confidence            9999984

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.26  E-value=0.0011  Score=56.91  Aligned_cols=74  Identities=18%  Similarity=0.289  Sum_probs=50.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      +++||+||+|+||..+++.+...|++|++++ +.++.+.+ +++   +....   .|..+.+-.    +++.+ . +++|
T Consensus       185 ~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~-~~l---Ga~~v---~~~~~~~~~----~~~~~-~-~g~D  250 (375)
T 2vn8_A          185 KRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELV-RKL---GADDV---IDYKSGSVE----EQLKS-L-KPFD  250 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHH-HHT---TCSEE---EETTSSCHH----HHHHT-S-CCBS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHH-HHc---CCCEE---EECCchHHH----HHHhh-c-CCCC
Confidence            4799999999999999999999999999988 44554432 332   33322   354443222    22222 2 4799


Q ss_pred             EEEEcCCC
Q 024994           81 ILINNAAI   88 (259)
Q Consensus        81 ~vi~~ag~   88 (259)
                      ++|+++|.
T Consensus       251 ~vid~~g~  258 (375)
T 2vn8_A          251 FILDNVGG  258 (375)
T ss_dssp             EEEESSCT
T ss_pred             EEEECCCC
Confidence            99999994

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.21  E-value=0.0033  Score=52.85  Aligned_cols=113  Identities=8%  Similarity=0.002  Sum_probs=67.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC--EEEEeeCChhHHHHHHHHHHhcC---CcEEEEEecCCCHHHHHHHHHHHHHHc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKG---FKVTGSVCDLSSREQREKLIETVTSIF   75 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (259)
                      +++.|+|+ |.+|.+++..|+..|.  .++++++++++++....++....   ..+.... +  +.+           .+
T Consensus        10 ~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~-~--~~~-----------a~   74 (326)
T 3vku_A           10 QKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYS-A--EYS-----------DA   74 (326)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGG-----------GG
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEE-C--cHH-----------Hh
Confidence            47899996 9999999999999987  89999999988877666666432   1222221 1  111           12


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC-CCCEEEEecCCC
Q 024994           76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVG  139 (259)
Q Consensus        76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~isS~~  139 (259)
                       ..-|++|.+||.....      -+.-.+.++.|..-...+.+.+    .+. .++.++++|...
T Consensus        75 -~~aDiVvi~ag~~~kp------G~tR~dL~~~N~~I~~~i~~~i----~~~~p~a~ilvvtNPv  128 (326)
T 3vku_A           75 -KDADLVVITAGAPQKP------GETRLDLVNKNLKILKSIVDPI----VDSGFNGIFLVAANPV  128 (326)
T ss_dssp             -TTCSEEEECCCCC----------------------CHHHHHHHH----HTTTCCSEEEECSSSH
T ss_pred             -cCCCEEEECCCCCCCC------CchHHHHHHHHHHHHHHHHHHH----HhcCCceEEEEccCch
Confidence             4789999999974211      1122344566766555555554    433 467888887754

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.18  E-value=0.007  Score=50.85  Aligned_cols=115  Identities=11%  Similarity=-0.012  Sum_probs=75.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC--EEEEeeCChhHHHHHHHHHHhc----CCcEEEEEecCCCHHHHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNK----GFKVTGSVCDLSSREQREKLIETVTSI   74 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~   74 (259)
                      +++.|+|+ |.+|.+++..|+..|.  .|+++++++++++....+++..    +..+.....|   .+    .       
T Consensus         6 ~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~~----a-------   70 (326)
T 3pqe_A            6 NKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---YE----D-------   70 (326)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---GG----G-------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---HH----H-------
Confidence            47899996 9999999999999997  8999999998887766666542    1123332222   11    1       


Q ss_pred             cCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCc
Q 024994           75 FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG  140 (259)
Q Consensus        75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~  140 (259)
                      + ..-|++|.++|....   ...+.   .+.++.|..-...+.+.+..+   ..++.++++|....
T Consensus        71 ~-~~aDvVvi~ag~p~k---pG~~R---~dL~~~N~~Iv~~i~~~I~~~---~p~a~vlvvtNPvd  126 (326)
T 3pqe_A           71 C-KDADIVCICAGANQK---PGETR---LELVEKNLKIFKGIVSEVMAS---GFDGIFLVATNPVD  126 (326)
T ss_dssp             G-TTCSEEEECCSCCCC---TTCCH---HHHHHHHHHHHHHHHHHHHHT---TCCSEEEECSSSHH
T ss_pred             h-CCCCEEEEecccCCC---CCccH---HHHHHHHHHHHHHHHHHHHHh---cCCeEEEEcCChHH
Confidence            2 468999999997421   12232   234567766655555555322   34578888887643

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.17  E-value=0.0013  Score=56.97  Aligned_cols=69  Identities=16%  Similarity=0.242  Sum_probs=51.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |+++|.|+ |++|..+++.|...|+ +|++++|+.++.+++.+++   +..  .  .+..   ++...+        ...
T Consensus       168 ~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~---g~~--~--~~~~---~l~~~l--------~~a  228 (404)
T 1gpj_A          168 KTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL---GGE--A--VRFD---ELVDHL--------ARS  228 (404)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH---TCE--E--CCGG---GHHHHH--------HTC
T ss_pred             CEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc---CCc--e--ecHH---hHHHHh--------cCC
Confidence            68999998 9999999999999998 9999999998876666554   221  1  2222   222222        268


Q ss_pred             cEEEEcCCC
Q 024994           80 NILINNAAI   88 (259)
Q Consensus        80 d~vi~~ag~   88 (259)
                      |+||++.+.
T Consensus       229 DvVi~at~~  237 (404)
T 1gpj_A          229 DVVVSATAA  237 (404)
T ss_dssp             SEEEECCSS
T ss_pred             CEEEEccCC
Confidence            999999874

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.16  E-value=0.01  Score=49.97  Aligned_cols=116  Identities=9%  Similarity=-0.010  Sum_probs=76.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC--EEEEeeCChhHHHHHHHHHHhcC---CcEEEEEecCCCHHHHHHHHHHHHHHc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKG---FKVTGSVCDLSSREQREKLIETVTSIF   75 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (259)
                      +++.|+|+ |.+|.+++..|+.+|.  .|++++++.++++....++....   .....+..  .|.+.           +
T Consensus        20 ~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d~~~-----------~   85 (331)
T 4aj2_A           20 NKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS--KDYSV-----------T   85 (331)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC--SSGGG-----------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc--CCHHH-----------h
Confidence            47899998 9999999999999997  89999999988887777776431   11112211  12211           1


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCc
Q 024994           76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG  140 (259)
Q Consensus        76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~  140 (259)
                       ..-|++|.+||.....   .++.   .+.++.|..-...+.+.+..+   ..++.++++|....
T Consensus        86 -~~aDiVvi~aG~~~kp---G~tR---~dL~~~N~~I~~~i~~~i~~~---~p~a~vlvvtNPvd  140 (331)
T 4aj2_A           86 -ANSKLVIITAGARQQE---GESR---LNLVQRNVNIFKFIIPNVVKY---SPQCKLLIVSNPVD  140 (331)
T ss_dssp             -TTEEEEEECCSCCCCT---TCCG---GGGHHHHHHHHHHHHHHHHHH---CTTCEEEECSSSHH
T ss_pred             -CCCCEEEEccCCCCCC---CccH---HHHHHHHHHHHHHHHHHHHHH---CCCeEEEEecChHH
Confidence             5799999999975321   1222   234556665555555555332   34678888887643

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.11  E-value=0.011  Score=48.56  Aligned_cols=42  Identities=24%  Similarity=0.163  Sum_probs=36.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE   43 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~   43 (259)
                      |++.|.|+ |.+|..+|+.|++.|++|++.+|+++.++...+.
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~   46 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKR   46 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Confidence            57888886 8899999999999999999999999887766554

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=97.10  E-value=0.0026  Score=53.65  Aligned_cols=74  Identities=16%  Similarity=0.245  Sum_probs=52.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      +++||+|+ |++|...++.+...|++|+++++++++++.+ ++   .+....   .|..+.+..+.    +.+.. +.+|
T Consensus       168 ~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~---lGa~~~---i~~~~~~~~~~----~~~~~-g~~d  234 (340)
T 3s2e_A          168 QWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLA-RR---LGAEVA---VNARDTDPAAW----LQKEI-GGAH  234 (340)
T ss_dssp             SEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHH-HH---TTCSEE---EETTTSCHHHH----HHHHH-SSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HH---cCCCEE---EeCCCcCHHHH----HHHhC-CCCC
Confidence            47999997 8999999999999999999999999887643 33   233222   34444333222    22233 5899


Q ss_pred             EEEEcCC
Q 024994           81 ILINNAA   87 (259)
Q Consensus        81 ~vi~~ag   87 (259)
                      ++|.++|
T Consensus       235 ~vid~~g  241 (340)
T 3s2e_A          235 GVLVTAV  241 (340)
T ss_dssp             EEEESSC
T ss_pred             EEEEeCC
Confidence            9999987

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=97.09  E-value=0.0026  Score=54.26  Aligned_cols=75  Identities=17%  Similarity=0.208  Sum_probs=51.4

Q ss_pred             EEEEEcCcchHHHHHHHHHHH-CCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            2 TALVTGGTRGIGHATVEELAR-FGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      ++||+||+|++|...++.+.. .|++|+++++++++.+.+ ++   .+....   .|..+  +   ..+++.+..++.+|
T Consensus       174 ~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~-~~---lGad~v---i~~~~--~---~~~~v~~~~~~g~D  241 (363)
T 4dvj_A          174 AILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWV-KS---LGAHHV---IDHSK--P---LAAEVAALGLGAPA  241 (363)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHH-HH---TTCSEE---ECTTS--C---HHHHHHTTCSCCEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHH-HH---cCCCEE---EeCCC--C---HHHHHHHhcCCCce
Confidence            799999999999988877665 589999999998877554 23   233222   34333  2   23333333334799


Q ss_pred             EEEEcCCC
Q 024994           81 ILINNAAI   88 (259)
Q Consensus        81 ~vi~~ag~   88 (259)
                      ++|.++|.
T Consensus       242 vvid~~g~  249 (363)
T 4dvj_A          242 FVFSTTHT  249 (363)
T ss_dssp             EEEECSCH
T ss_pred             EEEECCCc
Confidence            99999983

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=97.07  E-value=0.0039  Score=53.48  Aligned_cols=77  Identities=18%  Similarity=0.210  Sum_probs=53.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCC-CEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCC--CHHHHHHHHHHHHHHcCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLS--SREQREKLIETVTSIFQG   77 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~--~~~~~~~~~~~~~~~~~~   77 (259)
                      +++||+| +|++|...++.+...| ++|+++++++++++.+. ++   +... +  .|..  +.+++   .+++.+..++
T Consensus       197 ~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-~l---Ga~~-v--i~~~~~~~~~~---~~~v~~~~~g  265 (380)
T 1vj0_A          197 KTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EI---GADL-T--LNRRETSVEER---RKAIMDITHG  265 (380)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-HT---TCSE-E--EETTTSCHHHH---HHHHHHHTTT
T ss_pred             CEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-Hc---CCcE-E--EeccccCcchH---HHHHHHHhCC
Confidence            4799999 8999999999999999 59999999988876543 32   3222 1  2433  23343   3333333323


Q ss_pred             -CccEEEEcCCC
Q 024994           78 -KLNILINNAAI   88 (259)
Q Consensus        78 -~id~vi~~ag~   88 (259)
                       .+|++|.++|.
T Consensus       266 ~g~Dvvid~~g~  277 (380)
T 1vj0_A          266 RGADFILEATGD  277 (380)
T ss_dssp             SCEEEEEECSSC
T ss_pred             CCCcEEEECCCC
Confidence             69999999984

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=97.06  E-value=0.0028  Score=54.22  Aligned_cols=76  Identities=20%  Similarity=0.242  Sum_probs=52.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      +++||+|++|++|...++.+...|++|+.+. ++++++ ..+++   +...   ..|..+.+    +.+++.+..++++|
T Consensus       166 ~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~-~~~~l---Ga~~---vi~~~~~~----~~~~v~~~t~g~~d  233 (371)
T 3gqv_A          166 VYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFD-LAKSR---GAEE---VFDYRAPN----LAQTIRTYTKNNLR  233 (371)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH-HHHHT---TCSE---EEETTSTT----HHHHHHHHTTTCCC
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH-HHHHc---CCcE---EEECCCch----HHHHHHHHccCCcc
Confidence            4799999999999999999999999999886 566654 33333   3222   13444432    23334444445699


Q ss_pred             EEEEcCCC
Q 024994           81 ILINNAAI   88 (259)
Q Consensus        81 ~vi~~ag~   88 (259)
                      ++|.++|.
T Consensus       234 ~v~d~~g~  241 (371)
T 3gqv_A          234 YALDCITN  241 (371)
T ss_dssp             EEEESSCS
T ss_pred             EEEECCCc
Confidence            99999994

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.05  E-value=0.0014  Score=56.17  Aligned_cols=77  Identities=16%  Similarity=0.161  Sum_probs=52.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS-REQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~   78 (259)
                      +++||+|+ |++|..+++.+...|+ +|+++++++++++.+. ++   +....   .|..+ .+++.+.+.++   .++.
T Consensus       194 ~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~l---Ga~~v---i~~~~~~~~~~~~~~~~---~~~g  262 (374)
T 1cdo_A          194 STCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VF---GATDF---VNPNDHSEPISQVLSKM---TNGG  262 (374)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT---TCCEE---ECGGGCSSCHHHHHHHH---HTSC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-Hh---CCceE---EeccccchhHHHHHHHH---hCCC
Confidence            47999996 9999999999999999 8999999998876542 32   32211   34332 12233333332   2247


Q ss_pred             ccEEEEcCCC
Q 024994           79 LNILINNAAI   88 (259)
Q Consensus        79 id~vi~~ag~   88 (259)
                      +|++|+++|.
T Consensus       263 ~D~vid~~g~  272 (374)
T 1cdo_A          263 VDFSLECVGN  272 (374)
T ss_dssp             BSEEEECSCC
T ss_pred             CCEEEECCCC
Confidence            9999999984

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=97.04  E-value=0.0037  Score=54.16  Aligned_cols=39  Identities=21%  Similarity=0.245  Sum_probs=35.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDAR   40 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~   40 (259)
                      ++++|+|+ |.+|..+++.+...|++|++++++.+.++..
T Consensus       173 ~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~  211 (401)
T 1x13_A          173 AKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV  211 (401)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            57999997 8999999999999999999999999887664

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.04  E-value=0.0012  Score=58.36  Aligned_cols=74  Identities=11%  Similarity=0.122  Sum_probs=59.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+++|.|+ |-+|..+|+.|.++|++|++++++++.++.+..++     .+..+.+|-++++.++++=-       .+-|
T Consensus         4 M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-----~~~~i~Gd~~~~~~L~~Agi-------~~ad   70 (461)
T 4g65_A            4 MKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY-----DLRVVNGHASHPDVLHEAGA-------QDAD   70 (461)
T ss_dssp             EEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-----SCEEEESCTTCHHHHHHHTT-------TTCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-----CcEEEEEcCCCHHHHHhcCC-------CcCC
Confidence            57888888 89999999999999999999999999887765443     46778899999887766511       4688


Q ss_pred             EEEEcCC
Q 024994           81 ILINNAA   87 (259)
Q Consensus        81 ~vi~~ag   87 (259)
                      .+|...+
T Consensus        71 ~~ia~t~   77 (461)
T 4g65_A           71 MLVAVTN   77 (461)
T ss_dssp             EEEECCS
T ss_pred             EEEEEcC
Confidence            8887655

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=97.03  E-value=0.016  Score=47.85  Aligned_cols=114  Identities=9%  Similarity=-0.022  Sum_probs=71.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC--EEEEeeCChhHHHHHHHHHHh----cCCcEEEEEecCCCHHHHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKN----KGFKVTGSVCDLSSREQREKLIETVTSI   74 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~   74 (259)
                      |++.|+|+ |.+|.+++..|+..|.  .|++.++++++++....++..    ......+...  +|.+    .+      
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~----a~------   67 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYS----LL------   67 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGG----GG------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CCHH----Hh------
Confidence            57899999 9999999999999998  899999999887633333322    1112222211  1211    11      


Q ss_pred             cCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC-CCCEEEEecCCC
Q 024994           75 FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVG  139 (259)
Q Consensus        75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~isS~~  139 (259)
                        ..-|++|..+|....   ...+..   +.+..|..-.-.+.+.+    .+. .++.++++|...
T Consensus        68 --~~aDiVViaag~~~k---pG~~R~---dl~~~N~~i~~~i~~~i----~~~~p~a~iivvsNPv  121 (294)
T 1oju_A           68 --KGSEIIVVTAGLARK---PGMTRL---DLAHKNAGIIKDIAKKI----VENAPESKILVVTNPM  121 (294)
T ss_dssp             --TTCSEEEECCCCCCC---SSCCHH---HHHHHHHHHHHHHHHHH----HTTSTTCEEEECSSSH
T ss_pred             --CCCCEEEECCCCCCC---CCCcHH---HHHHHHHHHHHHHHHHH----HhhCCCeEEEEeCCcc
Confidence              468999999997522   123332   33556654444444444    443 457888888754

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=97.02  E-value=0.0028  Score=53.92  Aligned_cols=75  Identities=19%  Similarity=0.217  Sum_probs=52.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHC-CCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC-C
Q 024994            1 MTALVTGGTRGIGHATVEELARF-GAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG-K   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~-~   78 (259)
                      +++||+|+ |++|...++.+... |++|+++++++++++.+. ++   +....   .|..+.  +.+.+.++   .++ .
T Consensus       188 ~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~-~l---Ga~~v---i~~~~~--~~~~v~~~---~~g~g  254 (359)
T 1h2b_A          188 AYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RL---GADHV---VDARRD--PVKQVMEL---TRGRG  254 (359)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HT---TCSEE---EETTSC--HHHHHHHH---TTTCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-Hh---CCCEE---Eeccch--HHHHHHHH---hCCCC
Confidence            47999999 89999999988888 999999999988776542 32   32221   355443  22233322   223 6


Q ss_pred             ccEEEEcCCC
Q 024994           79 LNILINNAAI   88 (259)
Q Consensus        79 id~vi~~ag~   88 (259)
                      +|++|.++|.
T Consensus       255 ~Dvvid~~G~  264 (359)
T 1h2b_A          255 VNVAMDFVGS  264 (359)
T ss_dssp             EEEEEESSCC
T ss_pred             CcEEEECCCC
Confidence            9999999994

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=97.02  E-value=0.024  Score=47.27  Aligned_cols=146  Identities=15%  Similarity=0.067  Sum_probs=86.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHC-C--CEEEEeeCChhHHHHHHHHHHhcCCcEEEEEe-cCCCHHHHHHHHHHHHHHcC
Q 024994            1 MTALVTGGTRGIGHATVEELARF-G--AIVHTCSRNQIELDARLHEWKNKGFKVTGSVC-DLSSREQREKLIETVTSIFQ   76 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~-G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-D~~~~~~~~~~~~~~~~~~~   76 (259)
                      +++.|+||+|.+|.+++..|.++ +  ..++++++++ +.+-...+++........... .-.+.+.    +        
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~~~~~v~~~~~~~~~~~----~--------   67 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDATPA----L--------   67 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSCSSEEEEEECSSCCHHH----H--------
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCCCCceEEEecCCCcHHH----h--------
Confidence            57899999999999999999886 5  4799999987 444444555543322222211 1112222    1        


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCcc-----------CCC-
Q 024994           77 GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV-----------RGI-  144 (259)
Q Consensus        77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~-----------~~~-  144 (259)
                      ...|++|..||....   ..++.   .+.++.|..-...+.+.+..+   ..++.+++++-....           .+. 
T Consensus        68 ~~aDivii~ag~~rk---pG~~R---~dll~~N~~I~~~i~~~i~~~---~p~a~vlvvtNPvd~~t~~a~~~~k~sg~~  138 (312)
T 3hhp_A           68 EGADVVLISAGVARK---PGMDR---SDLFNVNAGIVKNLVQQVAKT---CPKACIGIITNPVNTTVAIAAEVLKKAGVY  138 (312)
T ss_dssp             TTCSEEEECCSCSCC---TTCCH---HHHHHHHHHHHHHHHHHHHHH---CTTSEEEECSSCHHHHHHHHHHHHHHTTCC
T ss_pred             CCCCEEEEeCCCCCC---CCCCH---HHHHHHHHHHHHHHHHHHHHH---CCCcEEEEecCcchhHHHHHHHHHHHcCCC
Confidence            479999999997522   12333   445667776666666655433   345788888765321           122 


Q ss_pred             CCChhhhhhHHHHHHHHHHHHHHH
Q 024994          145 PSVSLYGAYKGAMNQLTKNLACEW  168 (259)
Q Consensus       145 ~~~~~Y~~sK~a~~~~~~~~a~e~  168 (259)
                      |..-..+..-.=-..+-..++..+
T Consensus       139 p~~rv~G~~~LD~~R~~~~la~~l  162 (312)
T 3hhp_A          139 DKNKLFGVTTLDIIRSNTFVAELK  162 (312)
T ss_dssp             CTTSEEECCHHHHHHHHHHHHHHH
T ss_pred             CcceEEEEechhHHHHHHHHHHHh
Confidence            333344444222234556666666

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=96.99  E-value=0.015  Score=48.78  Aligned_cols=114  Identities=10%  Similarity=0.018  Sum_probs=71.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhc------CCcEEEEEecCCCHHHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNK------GFKVTGSVCDLSSREQREKLIETVTS   73 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~   73 (259)
                      +++.|+|+ |.+|.+++..|+..|. .|+++++++++.+....++...      ..++.. ..   |.+    .      
T Consensus         8 ~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-t~---d~~----a------   72 (324)
T 3gvi_A            8 NKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTG-AN---DYA----A------   72 (324)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-ES---SGG----G------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEE-eC---CHH----H------
Confidence            47899998 9999999999999998 9999999998776444444321      222221 11   211    1      


Q ss_pred             HcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCc
Q 024994           74 IFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG  140 (259)
Q Consensus        74 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~  140 (259)
                       + ..-|+||..+|......   .+   -.+.+..|..-...+.+.+..+   ..++.++++|-...
T Consensus        73 -~-~~aDiVIiaag~p~k~G---~~---R~dl~~~N~~i~~~i~~~i~~~---~p~a~iivvtNPvd  128 (324)
T 3gvi_A           73 -I-EGADVVIVTAGVPRKPG---MS---RDDLLGINLKVMEQVGAGIKKY---APEAFVICITNPLD  128 (324)
T ss_dssp             -G-TTCSEEEECCSCCCC-----------CHHHHHHHHHHHHHHHHHHHH---CTTCEEEECCSSHH
T ss_pred             -H-CCCCEEEEccCcCCCCC---CC---HHHHHHhhHHHHHHHHHHHHHH---CCCeEEEecCCCcH
Confidence             1 46899999999742211   11   2234556665555555554322   34578888887543

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=96.97  E-value=0.00025  Score=58.28  Aligned_cols=39  Identities=15%  Similarity=0.248  Sum_probs=35.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDAR   40 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~   40 (259)
                      |+++|+|+ ||.|++++..|++.|+ +|++++|+.++.+++
T Consensus       118 k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~l  157 (277)
T 3don_A          118 AYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNW  157 (277)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTC
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHH
Confidence            67999997 7999999999999998 899999999876554

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.95  E-value=0.0071  Score=51.72  Aligned_cols=81  Identities=19%  Similarity=0.169  Sum_probs=54.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecC-----------CCHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDL-----------SSREQREKLIE   69 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----------~~~~~~~~~~~   69 (259)
                      ++++|+|+ |.+|..+++.+...|++|++++|+.++++.+.+ +   +.  .++..|+           ...+....-.+
T Consensus       185 ~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-l---Ga--~~~~l~~~~~~~~gya~~~~~~~~~~~~~  257 (381)
T 3p2y_A          185 ASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS-V---GA--QWLDLGIDAAGEGGYARELSEAERAQQQQ  257 (381)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH-T---TC--EECCCC-------------CHHHHHHHHH
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c---CC--eEEeccccccccccchhhhhHHHHhhhHH
Confidence            47999999 899999999999999999999999988766543 2   22  2322221           00111222333


Q ss_pred             HHHHHcCCCccEEEEcCCCC
Q 024994           70 TVTSIFQGKLNILINNAAIA   89 (259)
Q Consensus        70 ~~~~~~~~~id~vi~~ag~~   89 (259)
                      .+.+.. ...|+||.++...
T Consensus       258 ~l~e~l-~~aDIVI~tv~iP  276 (381)
T 3p2y_A          258 ALEDAI-TKFDIVITTALVP  276 (381)
T ss_dssp             HHHHHH-TTCSEEEECCCCT
T ss_pred             HHHHHH-hcCCEEEECCCCC
Confidence            444444 5799999987654

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.95  E-value=0.0016  Score=55.35  Aligned_cols=73  Identities=18%  Similarity=0.255  Sum_probs=51.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      +++||+|+ |++|...++.+...|++|+++++++++.+.+.+++   +...   ..|..+.+.+       .+.. +.+|
T Consensus       182 ~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~l---Ga~~---vi~~~~~~~~-------~~~~-~g~D  246 (357)
T 2cf5_A          182 LRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDL---GADD---YVIGSDQAKM-------SELA-DSLD  246 (357)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTS---CCSC---EEETTCHHHH-------HHST-TTEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHc---CCce---eeccccHHHH-------HHhc-CCCC
Confidence            47999995 99999999988889999999999988775543232   3221   1344554322       2222 4799


Q ss_pred             EEEEcCCC
Q 024994           81 ILINNAAI   88 (259)
Q Consensus        81 ~vi~~ag~   88 (259)
                      ++|.++|.
T Consensus       247 ~vid~~g~  254 (357)
T 2cf5_A          247 YVIDTVPV  254 (357)
T ss_dssp             EEEECCCS
T ss_pred             EEEECCCC
Confidence            99999985

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=96.94  E-value=0.016  Score=48.32  Aligned_cols=72  Identities=11%  Similarity=0.089  Sum_probs=51.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhc------CCcEEEEEecCCCHHHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNK------GFKVTGSVCDLSSREQREKLIETVTS   73 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~   73 (259)
                      +++.|+|+ |.+|..++..|+..|. +|+++++++++++....++...      ..++...    +|.+.          
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t----~d~~a----------   67 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT----NNYAD----------   67 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE----SCGGG----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC----CCHHH----------
Confidence            47999999 9999999999999996 9999999988776655555432      1122211    22111          


Q ss_pred             HcCCCccEEEEcCCCC
Q 024994           74 IFQGKLNILINNAAIA   89 (259)
Q Consensus        74 ~~~~~id~vi~~ag~~   89 (259)
                       + ...|++|.++|..
T Consensus        68 -~-~~aD~Vi~a~g~p   81 (309)
T 1ur5_A           68 -T-ANSDVIVVTSGAP   81 (309)
T ss_dssp             -G-TTCSEEEECCCC-
T ss_pred             -H-CCCCEEEEcCCCC
Confidence             1 4689999999974

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=96.92  E-value=0.016  Score=48.16  Aligned_cols=114  Identities=11%  Similarity=0.034  Sum_probs=67.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC--EEEEeeCChhHHHHHHHHHHhcC---CcEEEEEecCCCHHHHHHHHHHHHHHc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKG---FKVTGSVCDLSSREQREKLIETVTSIF   75 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (259)
                      |++.|+|+ |.+|..++..|+.+|.  .|+++++++++++....++....   ....+..   .+.+    .       +
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~~~~----a-------~   65 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH---GGHS----E-------L   65 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE---ECGG----G-------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE---CCHH----H-------h
Confidence            57899998 9999999999999998  99999999887765555554321   1112211   1211    1       1


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCC
Q 024994           76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVG  139 (259)
Q Consensus        76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~  139 (259)
                       ...|+||.+++.....   ..   .-.+.+..|..-...+.+.+.++   ..++.+++++-..
T Consensus        66 -~~aDvVIi~~~~~~~~---g~---~r~dl~~~n~~i~~~i~~~i~~~---~p~~~vi~~tNP~  119 (304)
T 2v6b_A           66 -ADAQVVILTAGANQKP---GE---SRLDLLEKNADIFRELVPQITRA---APDAVLLVTSNPV  119 (304)
T ss_dssp             -TTCSEEEECC------------------CHHHHHHHHHHHHHHHHHH---CSSSEEEECSSSH
T ss_pred             -CCCCEEEEcCCCCCCC---CC---cHHHHHHhHHHHHHHHHHHHHHh---CCCeEEEEecCch
Confidence             4789999999864211   11   11223455655555555555443   2356677665544

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=96.92  E-value=0.008  Score=50.61  Aligned_cols=33  Identities=15%  Similarity=0.274  Sum_probs=28.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCCh
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQ   34 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~   34 (259)
                      ++|+|.|+ ||+|.++++.|+..|. ++.+++++.
T Consensus        35 ~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~   68 (340)
T 3rui_A           35 TKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGT   68 (340)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCE
Confidence            47899998 9999999999999997 788888754

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=96.91  E-value=0.0069  Score=48.92  Aligned_cols=77  Identities=13%  Similarity=0.212  Sum_probs=52.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCCh-------------------hHHHHHHHHHHhcC--CcEEEEEecC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQ-------------------IELDARLHEWKNKG--FKVTGSVCDL   58 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~--~~~~~~~~D~   58 (259)
                      ++|+|.|+ ||+|.++++.|+..|. ++.++|++.                   .+.+.+.+.+....  .++..+..++
T Consensus        29 ~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~  107 (251)
T 1zud_1           29 SQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQRL  107 (251)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred             CcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEeccC
Confidence            47899998 7899999999999997 788886543                   45666666665433  3455544455


Q ss_pred             CCHHHHHHHHHHHHHHcCCCccEEEEcCC
Q 024994           59 SSREQREKLIETVTSIFQGKLNILINNAA   87 (259)
Q Consensus        59 ~~~~~~~~~~~~~~~~~~~~id~vi~~ag   87 (259)
                      +. +.+..+++        ..|+||++..
T Consensus       108 ~~-~~~~~~~~--------~~DvVi~~~d  127 (251)
T 1zud_1          108 TG-EALKDAVA--------RADVVLDCTD  127 (251)
T ss_dssp             CH-HHHHHHHH--------HCSEEEECCS
T ss_pred             CH-HHHHHHHh--------cCCEEEECCC
Confidence            43 34444332        5799998754

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=96.90  E-value=0.0021  Score=53.80  Aligned_cols=72  Identities=17%  Similarity=0.163  Sum_probs=50.0

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCccE
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNI   81 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~   81 (259)
                      ++||+|++|++|...++.+...|++|+++++++++.+.+ +++   +....+   |..+.+.       +.+..++.+|+
T Consensus       149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~-~~l---Ga~~vi---~~~~~~~-------~~~~~~~~~d~  214 (324)
T 3nx4_A          149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYL-KSL---GANRIL---SRDEFAE-------SRPLEKQLWAG  214 (324)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH-HHH---TCSEEE---EGGGSSC-------CCSSCCCCEEE
T ss_pred             eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-Hhc---CCCEEE---ecCCHHH-------HHhhcCCCccE
Confidence            389999999999999999999999999999999887654 333   333222   2221111       11112246999


Q ss_pred             EEEcCC
Q 024994           82 LINNAA   87 (259)
Q Consensus        82 vi~~ag   87 (259)
                      +|.++|
T Consensus       215 v~d~~g  220 (324)
T 3nx4_A          215 AIDTVG  220 (324)
T ss_dssp             EEESSC
T ss_pred             EEECCC
Confidence            999887

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=96.89  E-value=0.0098  Score=50.45  Aligned_cols=77  Identities=22%  Similarity=0.214  Sum_probs=52.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCC--CHHHHHHHHHHHHHHcCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLS--SREQREKLIETVTSIFQG   77 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~--~~~~~~~~~~~~~~~~~~   77 (259)
                      +++||+|+ |++|...++.+...|+ +|+++++++++++.+ +++   +... .  .|..  +.++.   .+++.+..+.
T Consensus       173 ~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~l---Ga~~-v--i~~~~~~~~~~---~~~i~~~~~~  241 (356)
T 1pl8_A          173 HKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA-KEI---GADL-V--LQISKESPQEI---ARKVEGQLGC  241 (356)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHT---TCSE-E--EECSSCCHHHH---HHHHHHHHTS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh---CCCE-E--EcCcccccchH---HHHHHHHhCC
Confidence            47999996 8999999998888999 899999998877543 232   3321 1  3444  22332   2333333323


Q ss_pred             CccEEEEcCCC
Q 024994           78 KLNILINNAAI   88 (259)
Q Consensus        78 ~id~vi~~ag~   88 (259)
                      ++|++|.++|.
T Consensus       242 g~D~vid~~g~  252 (356)
T 1pl8_A          242 KPEVTIECTGA  252 (356)
T ss_dssp             CCSEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            69999999983

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=96.87  E-value=0.0023  Score=54.86  Aligned_cols=77  Identities=14%  Similarity=0.125  Sum_probs=51.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS-REQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~   78 (259)
                      +++||+|+ |++|..+++.+...|+ +|+++++++++++.+ +++   +....   .|..+ .+++.+.+.+   ..++.
T Consensus       197 ~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~l---Ga~~v---i~~~~~~~~~~~~v~~---~~~~g  265 (376)
T 1e3i_A          197 STCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKA-KAL---GATDC---LNPRELDKPVQDVITE---LTAGG  265 (376)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHT---TCSEE---ECGGGCSSCHHHHHHH---HHTSC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh---CCcEE---EccccccchHHHHHHH---HhCCC
Confidence            47999996 9999999999988999 899999999887654 332   32221   24332 1122222322   22247


Q ss_pred             ccEEEEcCCC
Q 024994           79 LNILINNAAI   88 (259)
Q Consensus        79 id~vi~~ag~   88 (259)
                      +|++|.++|.
T Consensus       266 ~Dvvid~~G~  275 (376)
T 1e3i_A          266 VDYSLDCAGT  275 (376)
T ss_dssp             BSEEEESSCC
T ss_pred             ccEEEECCCC
Confidence            9999999984

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=96.85  E-value=0.0036  Score=52.90  Aligned_cols=75  Identities=21%  Similarity=0.237  Sum_probs=51.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHC--CCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARF--GAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      +++||+|+ |++|...++.+...  |++|+++++++++.+.+ +++   +....   .|..+.   ...++++.+  +.+
T Consensus       172 ~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~-~~l---Ga~~v---i~~~~~---~~~~~~~~~--g~g  238 (344)
T 2h6e_A          172 PVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFA-LEL---GADYV---SEMKDA---ESLINKLTD--GLG  238 (344)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHH-HHH---TCSEE---ECHHHH---HHHHHHHHT--TCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHH-HHh---CCCEE---eccccc---hHHHHHhhc--CCC
Confidence            47999999 89999999988888  99999999998887554 333   32211   232220   122333322  236


Q ss_pred             ccEEEEcCCC
Q 024994           79 LNILINNAAI   88 (259)
Q Consensus        79 id~vi~~ag~   88 (259)
                      +|++|.++|.
T Consensus       239 ~D~vid~~g~  248 (344)
T 2h6e_A          239 ASIAIDLVGT  248 (344)
T ss_dssp             EEEEEESSCC
T ss_pred             ccEEEECCCC
Confidence            9999999984

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=96.84  E-value=0.002  Score=55.12  Aligned_cols=77  Identities=14%  Similarity=0.178  Sum_probs=51.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS-REQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~   78 (259)
                      +++||+|+ |++|..+++.+...|+ +|+.+++++++++.+ +++   +....   .|..+ .+++.+.+.   +..++.
T Consensus       193 ~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~l---Ga~~v---i~~~~~~~~~~~~~~---~~~~~g  261 (374)
T 2jhf_A          193 STCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKA-KEV---GATEC---VNPQDYKKPIQEVLT---EMSNGG  261 (374)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHT---TCSEE---ECGGGCSSCHHHHHH---HHTTSC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh---CCceE---ecccccchhHHHHHH---HHhCCC
Confidence            47999995 9999999999999999 899999999887654 232   32211   34332 112222232   223247


Q ss_pred             ccEEEEcCCC
Q 024994           79 LNILINNAAI   88 (259)
Q Consensus        79 id~vi~~ag~   88 (259)
                      +|++|.++|.
T Consensus       262 ~D~vid~~g~  271 (374)
T 2jhf_A          262 VDFSFEVIGR  271 (374)
T ss_dssp             BSEEEECSCC
T ss_pred             CcEEEECCCC
Confidence            9999999984

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=96.83  E-value=0.016  Score=48.43  Aligned_cols=114  Identities=14%  Similarity=0.118  Sum_probs=70.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC--EEEEeeCChhHHHHHHHHHHhc----CCcEEEEEecCCCHHHHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNK----GFKVTGSVCDLSSREQREKLIETVTSI   74 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~   74 (259)
                      |++.|+|+ |.+|.+++..|+.+|.  .|+++++++++++....+++..    .........|.  .+           .
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~--~~-----------a   66 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTND--YG-----------P   66 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESS--SG-----------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCC--HH-----------H
Confidence            57899997 9999999999999987  8999999998776555555431    11222221221  11           1


Q ss_pred             cCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC-CCCEEEEecCCC
Q 024994           75 FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVG  139 (259)
Q Consensus        75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~isS~~  139 (259)
                      + ..-|++|.++|.....   ..   .-.+.++.|..-.-.+.+.+    .+. .++.++++|...
T Consensus        67 ~-~~aDvVii~ag~~~kp---G~---~R~dl~~~N~~i~~~i~~~i----~~~~p~a~vivvtNPv  121 (314)
T 3nep_X           67 T-EDSDVCIITAGLPRSP---GM---SRDDLLAKNTEIVGGVTEQF----VEGSPDSTIIVVANPL  121 (314)
T ss_dssp             G-TTCSEEEECCCC-------------CHHHHHHHHHHHHHHHHHH----HTTCTTCEEEECCSSH
T ss_pred             h-CCCCEEEECCCCCCCC---CC---CHHHHHHhhHHHHHHHHHHH----HHhCCCcEEEecCCch
Confidence            2 4789999999974211   11   12334556665544554444    443 457888887754

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=96.82  E-value=0.038  Score=46.20  Aligned_cols=116  Identities=9%  Similarity=0.026  Sum_probs=73.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhc----CCcEEEEEecCCCHHHHHHHHHHHHHHc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNK----GFKVTGSVCDLSSREQREKLIETVTSIF   75 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (259)
                      +++.|+|+ |.+|.+++..|+.+|. .|+++++++++.+....++.+.    +....+...  .|.+    .       +
T Consensus         6 ~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t--~d~~----a-------~   71 (321)
T 3p7m_A            6 KKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGT--NDYK----D-------L   71 (321)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGG----G-------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEc--CCHH----H-------H
Confidence            47889995 9999999999999998 9999999998876655566532    112222111  1211    1       2


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCc
Q 024994           76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG  140 (259)
Q Consensus        76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~  140 (259)
                       ..-|+||..+|.....   ..+..   +.+..|..-...+.+.+..+   ..++.+++++-...
T Consensus        72 -~~aDvVIi~ag~p~k~---G~~R~---dl~~~N~~i~~~i~~~i~~~---~p~a~vivvtNPvd  126 (321)
T 3p7m_A           72 -ENSDVVIVTAGVPRKP---GMSRD---DLLGINIKVMQTVGEGIKHN---CPNAFVICITNPLD  126 (321)
T ss_dssp             -TTCSEEEECCSCCCCT---TCCHH---HHHHHHHHHHHHHHHHHHHH---CTTCEEEECCSSHH
T ss_pred             -CCCCEEEEcCCcCCCC---CCCHH---HHHHHhHHHHHHHHHHHHHH---CCCcEEEEecCchH
Confidence             4689999999975221   23332   34556666555555555322   24578888876543

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.81  E-value=0.0046  Score=52.89  Aligned_cols=72  Identities=18%  Similarity=0.266  Sum_probs=52.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      .++||+|+ |++|..+++.+...|++|+++++++++++.+. ++   +...   ..|..+.+.++    ++   . +++|
T Consensus       196 ~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~-~l---Ga~~---vi~~~~~~~~~----~~---~-~g~D  259 (369)
T 1uuf_A          196 KKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-AL---GADE---VVNSRNADEMA----AH---L-KSFD  259 (369)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HH---TCSE---EEETTCHHHHH----TT---T-TCEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCcE---EeccccHHHHH----Hh---h-cCCC
Confidence            47999998 88999999998889999999999998876543 33   3221   24555543222    21   1 4799


Q ss_pred             EEEEcCCC
Q 024994           81 ILINNAAI   88 (259)
Q Consensus        81 ~vi~~ag~   88 (259)
                      ++|.++|.
T Consensus       260 vvid~~g~  267 (369)
T 1uuf_A          260 FILNTVAA  267 (369)
T ss_dssp             EEEECCSS
T ss_pred             EEEECCCC
Confidence            99999985

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=96.79  E-value=0.0063  Score=52.66  Aligned_cols=76  Identities=21%  Similarity=0.327  Sum_probs=53.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC-C
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG-K   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~-~   78 (259)
                      +++||+|+ |++|...++.+...|+ +|+++++++++++.+ +++   +....   .|..+.+    +.+++.+..++ +
T Consensus       215 ~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~-~~l---Ga~~v---i~~~~~~----~~~~i~~~t~g~g  282 (404)
T 3ip1_A          215 DNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLA-KEL---GADHV---IDPTKEN----FVEAVLDYTNGLG  282 (404)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHH---TCSEE---ECTTTSC----HHHHHHHHTTTCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHc---CCCEE---EcCCCCC----HHHHHHHHhCCCC
Confidence            47999998 8999999999999999 899999998887543 343   32221   3444332    23333343333 6


Q ss_pred             ccEEEEcCCC
Q 024994           79 LNILINNAAI   88 (259)
Q Consensus        79 id~vi~~ag~   88 (259)
                      +|++|.++|.
T Consensus       283 ~D~vid~~g~  292 (404)
T 3ip1_A          283 AKLFLEATGV  292 (404)
T ss_dssp             CSEEEECSSC
T ss_pred             CCEEEECCCC
Confidence            9999999994

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=96.78  E-value=0.0085  Score=51.15  Aligned_cols=77  Identities=14%  Similarity=0.157  Sum_probs=51.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS-REQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~   78 (259)
                      +++||+|+ |++|..+++.+...|+ +|+++++++++++.+ +++   +....   .|..+ .+++.+   ++.+..++.
T Consensus       192 ~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~-~~l---Ga~~v---i~~~~~~~~~~~---~v~~~~~~g  260 (373)
T 2fzw_A          192 SVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARA-KEF---GATEC---INPQDFSKPIQE---VLIEMTDGG  260 (373)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH-HHH---TCSEE---ECGGGCSSCHHH---HHHHHTTSC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc---CCceE---eccccccccHHH---HHHHHhCCC
Confidence            47999996 9999999998888999 899999999887654 333   32211   23332 112222   233333247


Q ss_pred             ccEEEEcCCC
Q 024994           79 LNILINNAAI   88 (259)
Q Consensus        79 id~vi~~ag~   88 (259)
                      +|++|.++|.
T Consensus       261 ~D~vid~~g~  270 (373)
T 2fzw_A          261 VDYSFECIGN  270 (373)
T ss_dssp             BSEEEECSCC
T ss_pred             CCEEEECCCc
Confidence            9999999984

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=96.77  E-value=0.025  Score=47.25  Aligned_cols=113  Identities=16%  Similarity=0.073  Sum_probs=71.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCC--hhHHHHHHHHHHhc------CCcEEEEEecCCCHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRN--QIELDARLHEWKNK------GFKVTGSVCDLSSREQREKLIETV   71 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~--~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~   71 (259)
                      +++.|+|+ |.+|.+++..|+.+|. .|++++++  +++.+....++...      ..++..  .  ++.+         
T Consensus         9 ~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~--t--~d~~---------   74 (315)
T 3tl2_A            9 KKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIG--T--SDYA---------   74 (315)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEE--E--SCGG---------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEE--c--CCHH---------
Confidence            47899997 9999999999999999 99999999  55554443443321      112221  1  1111         


Q ss_pred             HHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCC
Q 024994           72 TSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVG  139 (259)
Q Consensus        72 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~  139 (259)
                        .+ ..-|++|.++|.....   ..+.   .+.++.|..-.-.+.+.+..+   ..++.++++|-..
T Consensus        75 --a~-~~aDvVIiaag~p~kp---g~~R---~dl~~~N~~i~~~i~~~i~~~---~p~a~vlvvsNPv  130 (315)
T 3tl2_A           75 --DT-ADSDVVVITAGIARKP---GMSR---DDLVATNSKIMKSITRDIAKH---SPNAIIVVLTNPV  130 (315)
T ss_dssp             --GG-TTCSEEEECCSCCCCT---TCCH---HHHHHHHHHHHHHHHHHHHHH---CTTCEEEECCSSH
T ss_pred             --Hh-CCCCEEEEeCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCeEEEECCChH
Confidence              12 5799999999975321   2333   335566766555555555332   3457888888654

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=96.77  E-value=0.0071  Score=50.66  Aligned_cols=113  Identities=9%  Similarity=-0.020  Sum_probs=68.3

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCC--EEEEeeCChhHHHHHHHHHHhcC---CcEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024994            2 TALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKG---FKVTGSVCDLSSREQREKLIETVTSIFQ   76 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (259)
                      ++.|+|+ |.+|..++..|+.+|.  .|+++|+++++++....++....   ..+.+. .  .+.+    .       + 
T Consensus         9 KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~--~~~~----a-------~-   72 (318)
T 1y6j_A            9 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY-A--GDYS----D-------V-   72 (318)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CGG----G-------G-
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE-E--CCHH----H-------h-
Confidence            5889998 9999999999999997  89999999877665555554321   122211 1  1211    1       2 


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCC
Q 024994           77 GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVG  139 (259)
Q Consensus        77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~  139 (259)
                      ..-|++|.++|.....   ..+.   .+.+..|+.-...+.+.+.++   ..++.++++|-..
T Consensus        73 ~~aDvVii~~g~p~k~---g~~r---~dl~~~n~~i~~~i~~~i~~~---~p~a~viv~tNPv  126 (318)
T 1y6j_A           73 KDCDVIVVTAGANRKP---GETR---LDLAKKNVMIAKEVTQNIMKY---YNHGVILVVSNPV  126 (318)
T ss_dssp             TTCSEEEECCCC---------CH---HHHHHHHHHHHHHHHHHHHHH---CCSCEEEECSSSH
T ss_pred             CCCCEEEEcCCCCCCC---CcCH---HHHHHhhHHHHHHHHHHHHHh---CCCcEEEEecCcH
Confidence            5799999999974211   1222   234666766666666665443   3467777765543

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.76  E-value=0.0032  Score=54.71  Aligned_cols=72  Identities=15%  Similarity=0.085  Sum_probs=54.5

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCccE
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNI   81 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~   81 (259)
                      .++|.|. |.+|..+++.|.++|+.|++++++.+..+.+.+    .  .+.++.+|.++.+.++++=      . .+.|+
T Consensus         6 ~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~----~--g~~vi~GDat~~~~L~~ag------i-~~A~~   71 (413)
T 3l9w_A            6 RVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK----F--GMKVFYGDATRMDLLESAG------A-AKAEV   71 (413)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH----T--TCCCEESCTTCHHHHHHTT------T-TTCSE
T ss_pred             eEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh----C--CCeEEEcCCCCHHHHHhcC------C-CccCE
Confidence            4889997 889999999999999999999999988766542    1  3456678888877655540      1 35777


Q ss_pred             EEEcCC
Q 024994           82 LINNAA   87 (259)
Q Consensus        82 vi~~ag   87 (259)
                      ||.+.+
T Consensus        72 viv~~~   77 (413)
T 3l9w_A           72 LINAID   77 (413)
T ss_dssp             EEECCS
T ss_pred             EEECCC
Confidence            777665

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.75  E-value=0.0018  Score=55.04  Aligned_cols=73  Identities=18%  Similarity=0.183  Sum_probs=50.0

Q ss_pred             CEEEEEcCcchHHHHH-HHHH-HHCCCE-EEEeeCChh---HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHAT-VEEL-ARFGAI-VHTCSRNQI---ELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSI   74 (259)
Q Consensus         1 k~~lItG~s~giG~~~-a~~l-~~~G~~-V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   74 (259)
                      +++||+|+ |++|... ++.+ ...|++ |+.++++++   +.+.+ +++   +  ...+  |..+. ++.+ +.++   
T Consensus       174 ~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~-~~l---G--a~~v--~~~~~-~~~~-i~~~---  239 (357)
T 2b5w_A          174 SSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDII-EEL---D--ATYV--DSRQT-PVED-VPDV---  239 (357)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHH-HHT---T--CEEE--ETTTS-CGGG-HHHH---
T ss_pred             CEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHH-HHc---C--Cccc--CCCcc-CHHH-HHHh---
Confidence            47999999 9999999 7777 677997 999999887   66543 332   3  2323  55432 2222 3333   


Q ss_pred             cCCCccEEEEcCCC
Q 024994           75 FQGKLNILINNAAI   88 (259)
Q Consensus        75 ~~~~id~vi~~ag~   88 (259)
                       ++.+|++|.++|.
T Consensus       240 -~gg~Dvvid~~g~  252 (357)
T 2b5w_A          240 -YEQMDFIYEATGF  252 (357)
T ss_dssp             -SCCEEEEEECSCC
T ss_pred             -CCCCCEEEECCCC
Confidence             2579999999983

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=96.72  E-value=0.037  Score=46.41  Aligned_cols=115  Identities=10%  Similarity=-0.024  Sum_probs=72.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC--EEEEeeCChhHHHHHHHHHHhc---CCcEEEE-EecCCCHHHHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNK---GFKVTGS-VCDLSSREQREKLIETVTSI   74 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~-~~D~~~~~~~~~~~~~~~~~   74 (259)
                      +++.|+|+ |.+|..++..|+.+|.  .|+++++++++++....+++..   ....... ..|..+              
T Consensus        22 ~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~--------------   86 (330)
T 3ldh_A           22 NKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV--------------   86 (330)
T ss_dssp             CEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS--------------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH--------------
Confidence            47899999 9999999999999997  8999999998877666665532   1111122 234322              


Q ss_pred             cCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCc
Q 024994           75 FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG  140 (259)
Q Consensus        75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~  140 (259)
                      + ..-|++|.+||......   .+.   .+.+..|..-.-.+.+.+..+   ..++.++++|....
T Consensus        87 ~-~daDiVIitaG~p~kpG---~tR---~dll~~N~~I~k~i~~~I~k~---~P~a~ilvvtNPvd  142 (330)
T 3ldh_A           87 S-AGSKLVVITAGARQQEG---ESR---LNLVQRNVNIFKFIIPNIVKH---SPDCLKELHPELGT  142 (330)
T ss_dssp             C-SSCSEEEECCSCCCCSS---CCT---TGGGHHHHHHHHHHHHHHHHH---CTTCEEEECSSSHH
T ss_pred             h-CCCCEEEEeCCCCCCCC---CCH---HHHHHhhHHHHHHHHHHHHhh---CCCceEEeCCCccH
Confidence            1 57899999999753221   121   123335544444444444322   34678888887543

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=96.72  E-value=0.0046  Score=53.36  Aligned_cols=77  Identities=21%  Similarity=0.287  Sum_probs=52.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC-C
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG-K   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~-~   78 (259)
                      +++||+|+ |++|...++.+...|+ +|+++++++++++.+ +++   +.  ..  .|.++.+.+   .+++.+..++ .
T Consensus       187 ~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a-~~l---Ga--~~--i~~~~~~~~---~~~v~~~t~g~g  254 (398)
T 1kol_A          187 STVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA-KAQ---GF--EI--ADLSLDTPL---HEQIAALLGEPE  254 (398)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHT---TC--EE--EETTSSSCH---HHHHHHHHSSSC
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHH-HHc---CC--cE--EccCCcchH---HHHHHHHhCCCC
Confidence            47999995 9999999998888999 799999998887654 332   43  22  455443222   2223332323 6


Q ss_pred             ccEEEEcCCCC
Q 024994           79 LNILINNAAIA   89 (259)
Q Consensus        79 id~vi~~ag~~   89 (259)
                      +|++|.++|..
T Consensus       255 ~Dvvid~~G~~  265 (398)
T 1kol_A          255 VDCAVDAVGFE  265 (398)
T ss_dssp             EEEEEECCCTT
T ss_pred             CCEEEECCCCc
Confidence            99999999964

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.71  E-value=0.0054  Score=50.40  Aligned_cols=85  Identities=13%  Similarity=0.017  Sum_probs=58.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHH-------HHhcCCcEEEEEecCCCHHHHHHHH---HH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE-------WKNKGFKVTGSVCDLSSREQREKLI---ET   70 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~D~~~~~~~~~~~---~~   70 (259)
                      |++.|.|. |.+|..+++.|++.|++|++.+|++++.+.+.+.       +.+.-....++..-+.+...++.++   ++
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~   80 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHG   80 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcch
Confidence            57888986 9999999999999999999999999877665431       0000012334455566667777777   66


Q ss_pred             HHHHcCCCccEEEEcCC
Q 024994           71 VTSIFQGKLNILINNAA   87 (259)
Q Consensus        71 ~~~~~~~~id~vi~~ag   87 (259)
                      +.+.. .+-.++|++.+
T Consensus        81 l~~~l-~~~~~vi~~st   96 (287)
T 3pef_A           81 VLEGI-GEGRGYVDMST   96 (287)
T ss_dssp             HHHHC-CTTCEEEECSC
T ss_pred             HhhcC-CCCCEEEeCCC
Confidence            66655 34456777754

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.70  E-value=0.0078  Score=51.89  Aligned_cols=40  Identities=18%  Similarity=0.242  Sum_probs=35.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARL   41 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~   41 (259)
                      .+|+|+|+ |.+|..+++.+...|++|++++++.++++.+.
T Consensus       191 ~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~  230 (405)
T 4dio_A          191 AKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVA  230 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHH
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            37899999 89999999999999999999999998876553

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=96.70  E-value=0.0064  Score=52.06  Aligned_cols=77  Identities=12%  Similarity=0.118  Sum_probs=52.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS-REQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~   78 (259)
                      +++||+|+ |++|...++.+...|+ +|+++++++++++.+ ++   .+....   .|..+ .+++   .+++.+..++.
T Consensus       195 ~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a-~~---lGa~~v---i~~~~~~~~~---~~~i~~~~~gg  263 (378)
T 3uko_A          195 SNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETA-KK---FGVNEF---VNPKDHDKPI---QEVIVDLTDGG  263 (378)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHH-HT---TTCCEE---ECGGGCSSCH---HHHHHHHTTSC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HH---cCCcEE---EccccCchhH---HHHHHHhcCCC
Confidence            36899998 9999999999988999 899999999887643 32   233221   23331 1222   23333333357


Q ss_pred             ccEEEEcCCC
Q 024994           79 LNILINNAAI   88 (259)
Q Consensus        79 id~vi~~ag~   88 (259)
                      +|++|.++|.
T Consensus       264 ~D~vid~~g~  273 (378)
T 3uko_A          264 VDYSFECIGN  273 (378)
T ss_dssp             BSEEEECSCC
T ss_pred             CCEEEECCCC
Confidence            9999999994

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=96.69  E-value=0.0056  Score=50.29  Aligned_cols=41  Identities=10%  Similarity=0.029  Sum_probs=37.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARL   41 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~   41 (259)
                      |++.|.|++|.+|.++++.|.+.|++|++++|+.++.+.+.
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~   52 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQ   52 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH
Confidence            47999999999999999999999999999999988776654

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=96.69  E-value=0.021  Score=47.72  Aligned_cols=115  Identities=9%  Similarity=0.043  Sum_probs=70.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC--EEEEeeCChhHHHHHHHHHHhc---CCcEEEEEecCCCHHHHHHHHHHHHHHc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNK---GFKVTGSVCDLSSREQREKLIETVTSIF   75 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (259)
                      |++.|+|+ |.+|.+++..|++.|+  .|+++++++++++....++...   .....+. .  ++.+.    +       
T Consensus         1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~-~--~d~~~----~-------   65 (319)
T 1a5z_A            1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIY-A--GDYAD----L-------   65 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEE-E--CCGGG----G-------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEE-e--CCHHH----h-------
Confidence            57899998 9999999999999998  9999999988877655444321   0111111 1  23211    1       


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCc
Q 024994           76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG  140 (259)
Q Consensus        76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~  140 (259)
                       ...|+||.+++.....   ..+..   +.+..|..-...+.+.+.++   ..++.+|+++...+
T Consensus        66 -~~aDvViiav~~~~~~---g~~r~---dl~~~n~~i~~~i~~~i~~~---~~~~~ii~~tNp~~  120 (319)
T 1a5z_A           66 -KGSDVVIVAAGVPQKP---GETRL---QLLGRNARVMKEIARNVSKY---APDSIVIVVTNPVD  120 (319)
T ss_dssp             -TTCSEEEECCCCCCCS---SCCHH---HHHHHHHHHHHHHHHHHHHH---CTTCEEEECSSSHH
T ss_pred             -CCCCEEEEccCCCCCC---CCCHH---HHHHHHHHHHHHHHHHHHhh---CCCeEEEEeCCcHH
Confidence             4689999999864321   11221   23445555444555544333   23567777665443

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=96.68  E-value=0.03  Score=46.62  Aligned_cols=143  Identities=15%  Similarity=0.071  Sum_probs=86.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCC--CEEEEeeCChhHHHHHHHHHHhcC---CcEEEEEecCCCHHHHHHHHHHHHHHc
Q 024994            1 MTALVTGGTRGIGHATVEELARFG--AIVHTCSRNQIELDARLHEWKNKG---FKVTGSVCDLSSREQREKLIETVTSIF   75 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (259)
                      +++.|+|+ |.+|.+++..|+.++  ..+++.|+++++++....++....   ..+.+. .+  +.+.           +
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~-~~--~~~a-----------~   65 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVW-AG--SYGD-----------L   65 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEE-EC--CGGG-----------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEE-EC--CHHH-----------h
Confidence            57899998 999999999999997  489999999988877666665421   122222 22  2221           2


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccC--------CCCCC
Q 024994           76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR--------GIPSV  147 (259)
Q Consensus        76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~--------~~~~~  147 (259)
                       ..-|+||..+|.....   ..+..   +.+..|..-...+.+.+..+   ..++.++++|-.....        +.|..
T Consensus        66 -~~aD~Vii~ag~~~~~---g~~r~---dl~~~n~~i~~~i~~~i~~~---~p~a~iiv~tNPv~~~t~~~~k~s~~p~~  135 (310)
T 2xxj_A           66 -EGARAVVLAAGVAQRP---GETRL---QLLDRNAQVFAQVVPRVLEA---APEAVLLVATNPVDVMTQVAYALSGLPPG  135 (310)
T ss_dssp             -TTEEEEEECCCCCCCT---TCCHH---HHHHHHHHHHHHHHHHHHHH---CTTCEEEECSSSHHHHHHHHHHHHTCCGG
T ss_pred             -CCCCEEEECCCCCCCC---CcCHH---HHHHhhHHHHHHHHHHHHHH---CCCcEEEEecCchHHHHHHHHHHcCCCHH
Confidence             4799999999975321   22332   33555655555555444322   3467888887654321        23332


Q ss_pred             hhhhh-hHHHHHHHHHHHHHHH
Q 024994          148 SLYGA-YKGAMNQLTKNLACEW  168 (259)
Q Consensus       148 ~~Y~~-sK~a~~~~~~~~a~e~  168 (259)
                      -..+. +-.-...+-..++..+
T Consensus       136 rviG~gt~LD~~R~~~~la~~l  157 (310)
T 2xxj_A          136 RVVGSGTILDTARFRALLAEYL  157 (310)
T ss_dssp             GEEECTTHHHHHHHHHHHHHHH
T ss_pred             HEEecCcchhHHHHHHHHHHHh
Confidence            33333 2222345556666665

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=96.68  E-value=0.0044  Score=53.18  Aligned_cols=77  Identities=16%  Similarity=0.123  Sum_probs=52.1

Q ss_pred             EEEEEc-CcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            2 TALVTG-GTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         2 ~~lItG-~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      ++||.| |+|++|...++.+...|++|+.+++++++.+.+. ++   +....   .|..+.+-.++ +.+....  ..+|
T Consensus       173 ~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~-~l---Ga~~~---~~~~~~~~~~~-v~~~t~~--~g~d  242 (379)
T 3iup_A          173 SALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLK-AQ---GAVHV---CNAASPTFMQD-LTEALVS--TGAT  242 (379)
T ss_dssp             SCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHH-HT---TCSCE---EETTSTTHHHH-HHHHHHH--HCCC
T ss_pred             EEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hC---CCcEE---EeCCChHHHHH-HHHHhcC--CCce
Confidence            578987 9999999999999889999999999988876543 22   32221   34444322222 2222221  2699


Q ss_pred             EEEEcCCC
Q 024994           81 ILINNAAI   88 (259)
Q Consensus        81 ~vi~~ag~   88 (259)
                      ++|.++|.
T Consensus       243 ~v~d~~g~  250 (379)
T 3iup_A          243 IAFDATGG  250 (379)
T ss_dssp             EEEESCEE
T ss_pred             EEEECCCc
Confidence            99999995

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=96.66  E-value=0.038  Score=45.94  Aligned_cols=115  Identities=16%  Similarity=0.062  Sum_probs=71.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHC--CCEEEEeeCChhHHHHHHHHHHhc----CCcEEEEEecCCCHHHHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARF--GAIVHTCSRNQIELDARLHEWKNK----GFKVTGSVCDLSSREQREKLIETVTSI   74 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~   74 (259)
                      +++.|+|+ |.+|..++..|+++  |.+|+++++++++++....++...    .....+...  +|.+.           
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t--~d~~~-----------   66 (310)
T 1guz_A            1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYAD-----------   66 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGGG-----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEEC--CCHHH-----------
Confidence            57899998 99999999999996  789999999988777554344321    111111111  22111           


Q ss_pred             cCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCC
Q 024994           75 FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVG  139 (259)
Q Consensus        75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~  139 (259)
                      + ...|++|.+++....   ...+.   .+.+..|..-...+.+.+.++   ..++.+++++-..
T Consensus        67 l-~~aDvViiav~~p~~---~g~~r---~dl~~~n~~i~~~i~~~i~~~---~~~~~viv~tNP~  121 (310)
T 1guz_A           67 T-ANSDIVIITAGLPRK---PGMTR---EDLLMKNAGIVKEVTDNIMKH---SKNPIIIVVSNPL  121 (310)
T ss_dssp             G-TTCSEEEECCSCCCC---TTCCH---HHHHHHHHHHHHHHHHHHHHH---CSSCEEEECCSSH
T ss_pred             H-CCCCEEEEeCCCCCC---CCCCH---HHHHHHHHHHHHHHHHHHHHh---CCCcEEEEEcCch
Confidence            1 468999999985321   11222   245556666666666666544   2357777776543

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=96.65  E-value=0.0072  Score=51.57  Aligned_cols=76  Identities=13%  Similarity=0.236  Sum_probs=51.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      +++||+|+ |++|...++.+...|+ +|+.+++++++++.+ +++   +....   .|..+.+    ..+++.+..++.+
T Consensus       192 ~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a-~~l---Ga~~v---i~~~~~~----~~~~~~~~~~gg~  259 (371)
T 1f8f_A          192 SSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQL---GATHV---INSKTQD----PVAAIKEITDGGV  259 (371)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHH---TCSEE---EETTTSC----HHHHHHHHTTSCE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHc---CCCEE---ecCCccC----HHHHHHHhcCCCC
Confidence            47999995 9999999998888899 699999998887554 333   32221   2433322    2233333332479


Q ss_pred             cEEEEcCCC
Q 024994           80 NILINNAAI   88 (259)
Q Consensus        80 d~vi~~ag~   88 (259)
                      |++|.++|.
T Consensus       260 D~vid~~g~  268 (371)
T 1f8f_A          260 NFALESTGS  268 (371)
T ss_dssp             EEEEECSCC
T ss_pred             cEEEECCCC
Confidence            999999983

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=96.65  E-value=0.0099  Score=50.76  Aligned_cols=77  Identities=16%  Similarity=0.157  Sum_probs=51.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS-REQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~   78 (259)
                      +++||+|+ |++|...++.+...|+ +|+.+++++++++.+ +++   +....   .|..+ .+++   .+++.+..++.
T Consensus       193 ~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~l---Ga~~v---i~~~~~~~~~---~~~i~~~t~gg  261 (373)
T 1p0f_A          193 STCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKA-IEL---GATEC---LNPKDYDKPI---YEVICEKTNGG  261 (373)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH-HHT---TCSEE---ECGGGCSSCH---HHHHHHHTTSC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHc---CCcEE---EecccccchH---HHHHHHHhCCC
Confidence            47999996 9999999998888899 899999998887654 232   32221   23332 1122   22333333347


Q ss_pred             ccEEEEcCCC
Q 024994           79 LNILINNAAI   88 (259)
Q Consensus        79 id~vi~~ag~   88 (259)
                      +|++|.++|.
T Consensus       262 ~Dvvid~~g~  271 (373)
T 1p0f_A          262 VDYAVECAGR  271 (373)
T ss_dssp             BSEEEECSCC
T ss_pred             CCEEEECCCC
Confidence            9999999984

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.62  E-value=0.0075  Score=52.03  Aligned_cols=77  Identities=16%  Similarity=0.263  Sum_probs=51.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC-C
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG-K   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~-~   78 (259)
                      +++||+|+ |++|...++.+...|+ +|+++++++++++.+ +   +.+.  ..  .|..+.+.+   .+++.+..++ .
T Consensus       187 ~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~---~lGa--~~--i~~~~~~~~---~~~~~~~~~g~g  254 (398)
T 2dph_A          187 SHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLL-S---DAGF--ET--IDLRNSAPL---RDQIDQILGKPE  254 (398)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-H---TTTC--EE--EETTSSSCH---HHHHHHHHSSSC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-H---HcCC--cE--EcCCCcchH---HHHHHHHhCCCC
Confidence            47999997 9999999998888899 999999998887543 2   2243  32  355442211   1222222223 6


Q ss_pred             ccEEEEcCCCC
Q 024994           79 LNILINNAAIA   89 (259)
Q Consensus        79 id~vi~~ag~~   89 (259)
                      +|++|.++|..
T Consensus       255 ~Dvvid~~g~~  265 (398)
T 2dph_A          255 VDCGVDAVGFE  265 (398)
T ss_dssp             EEEEEECSCTT
T ss_pred             CCEEEECCCCc
Confidence            99999999853

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.62  E-value=0.0029  Score=52.94  Aligned_cols=72  Identities=18%  Similarity=0.233  Sum_probs=48.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      +++||+||+|++|...++.+...|++|+.+.++. +. +..+++   +...   ..|..+.+...+       .. ..+|
T Consensus       154 ~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~-~~-~~~~~l---Ga~~---~i~~~~~~~~~~-------~~-~g~D  217 (321)
T 3tqh_A          154 DVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR-NH-AFLKAL---GAEQ---CINYHEEDFLLA-------IS-TPVD  217 (321)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHH-HH-HHHHHH---TCSE---EEETTTSCHHHH-------CC-SCEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccc-hH-HHHHHc---CCCE---EEeCCCcchhhh-------hc-cCCC
Confidence            4799999999999999999999999999988543 33 334443   3222   234444321211       12 4699


Q ss_pred             EEEEcCCC
Q 024994           81 ILINNAAI   88 (259)
Q Consensus        81 ~vi~~ag~   88 (259)
                      ++|.++|.
T Consensus       218 ~v~d~~g~  225 (321)
T 3tqh_A          218 AVIDLVGG  225 (321)
T ss_dssp             EEEESSCH
T ss_pred             EEEECCCc
Confidence            99999983

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=96.60  E-value=0.037  Score=46.18  Aligned_cols=113  Identities=10%  Similarity=0.046  Sum_probs=69.9

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCC--EEEEeeCChhHHHHHHHHHHhc----CCcEEEEEecCCCHHHHHHHHHHHHHHc
Q 024994            2 TALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNK----GFKVTGSVCDLSSREQREKLIETVTSIF   75 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (259)
                      ++.|+|+ |.+|..++..|+.+|.  .|+++++++++++....++...    +..+.+. .|  +.+.           +
T Consensus         8 KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~-~~--~~~a-----------~   72 (317)
T 3d0o_A            8 KVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVK-AG--EYSD-----------C   72 (317)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEE-EC--CGGG-----------G
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEE-eC--CHHH-----------h
Confidence            7899999 9999999999999884  8999999987776544444321    1222222 22  2111           2


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCC
Q 024994           76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVG  139 (259)
Q Consensus        76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~  139 (259)
                       ..-|+||..+|.....   ..+..   ..+..|..-...+.+.+.++   ..++.++++|-..
T Consensus        73 -~~aDvVvi~ag~~~~~---g~~r~---dl~~~n~~i~~~i~~~i~~~---~p~a~viv~tNPv  126 (317)
T 3d0o_A           73 -HDADLVVICAGAAQKP---GETRL---DLVSKNLKIFKSIVGEVMAS---KFDGIFLVATNPV  126 (317)
T ss_dssp             -TTCSEEEECCCCCCCT---TCCHH---HHHHHHHHHHHHHHHHHHHT---TCCSEEEECSSSH
T ss_pred             -CCCCEEEECCCCCCCC---CCcHH---HHHHHHHHHHHHHHHHHHHh---CCCcEEEEecCcH
Confidence             4799999999975321   12322   33455555555554444322   3457777766544

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=96.59  E-value=0.0052  Score=50.82  Aligned_cols=84  Identities=6%  Similarity=-0.014  Sum_probs=59.6

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHH-------HHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE-------WKNKGFKVTGSVCDLSSREQREKLIETVTSI   74 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   74 (259)
                      ++.|.|. |.+|..+++.|++.|++|++.+|++++.+.+.+.       +.+.-. ..++..-+.+...++.+++++.+.
T Consensus        17 ~I~vIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~~~l~~~   94 (296)
T 3qha_A           17 KLGYIGL-GNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVVGELAGH   94 (296)
T ss_dssp             CEEEECC-STTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHHHHHHTT
T ss_pred             eEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHHHHHHHh
Confidence            5778875 8999999999999999999999999877665431       111111 345556666777788888777665


Q ss_pred             cCCCccEEEEcCCC
Q 024994           75 FQGKLNILINNAAI   88 (259)
Q Consensus        75 ~~~~id~vi~~ag~   88 (259)
                      . .+-.++|++...
T Consensus        95 l-~~g~ivv~~st~  107 (296)
T 3qha_A           95 A-KPGTVIAIHSTI  107 (296)
T ss_dssp             C-CTTCEEEECSCC
T ss_pred             c-CCCCEEEEeCCC
Confidence            5 344677777653

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=96.58  E-value=0.017  Score=52.32  Aligned_cols=86  Identities=13%  Similarity=0.153  Sum_probs=53.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCCh-------------------hHHHHHHHHHHhcCC--cEEEEEecC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQ-------------------IELDARLHEWKNKGF--KVTGSVCDL   58 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~--~~~~~~~D~   58 (259)
                      ++|+|.|+ ||+|.++++.|+..|. ++.++|.+.                   .+.+.+.+.+.....  ++..+..++
T Consensus       327 arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v~~~~~~I  405 (615)
T 4gsl_A          327 TKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKLSI  405 (615)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEECCCC
T ss_pred             CeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEEEEeeccc
Confidence            47899998 8999999999999997 788988754                   455566666665443  444444333


Q ss_pred             -------CCHHHHHHHHHHHHHHcCCCccEEEEcCCC
Q 024994           59 -------SSREQREKLIETVTSIFQGKLNILINNAAI   88 (259)
Q Consensus        59 -------~~~~~~~~~~~~~~~~~~~~id~vi~~ag~   88 (259)
                             ++++...--.+.+.+.+ ...|+||.+..-
T Consensus       406 pm~gh~v~~e~~~~l~~~~l~~ll-~~~DlVvd~tDn  441 (615)
T 4gsl_A          406 PMIGHKLVNEEAQHKDFDRLRALI-KEHDIIFLLVDS  441 (615)
T ss_dssp             CCTTCCCSCHHHHHHHHHHHHHHH-HHCSEEEECCSS
T ss_pred             cccCccccchhhhcCCHHHHHHHh-hcCCEEEecCCC
Confidence                   23211111112222223 368999988763

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=96.56  E-value=0.041  Score=46.17  Aligned_cols=143  Identities=9%  Similarity=0.041  Sum_probs=84.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC--EEEEeeCChhHHHHHHHHHHhcC---CcEEEEEecCCCHHHHHHHHHHHHHHc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKG---FKVTGSVCDLSSREQREKLIETVTSIF   75 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (259)
                      +++.|+|+ |.+|.+++..|+.++.  .++++|++.++++....++....   ..+.+. .|  +.+.           +
T Consensus        10 ~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~~--~~~a-----------~   74 (326)
T 2zqz_A           10 QKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIY-SA--EYSD-----------A   74 (326)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEE-EC--CGGG-----------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEE-EC--CHHH-----------h
Confidence            47899999 9999999999999886  89999999988877666665431   122222 22  2111           1


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccC--------CCCCC
Q 024994           76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR--------GIPSV  147 (259)
Q Consensus        76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~--------~~~~~  147 (259)
                       ..-|+||..+|.....   ..+.   .+.+..|..-...+.+.+..+   ..++.++++|-.....        +.|+.
T Consensus        75 -~~aDvVii~ag~~~k~---g~~R---~dl~~~n~~i~~~i~~~i~~~---~p~a~iiv~tNPv~~~t~~~~k~s~~p~~  144 (326)
T 2zqz_A           75 -KDADLVVITAGAPQKP---GETR---LDLVNKNLKILKSIVDPIVDS---GFNGIFLVAANPVDILTYATWKLSGFPKN  144 (326)
T ss_dssp             -GGCSEEEECCCCC--------CH---HHHHHHHHHHHHHHHHHHHHH---TCCSEEEECSSSHHHHHHHHHHHHCCCGG
T ss_pred             -CCCCEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHHH---CCCeEEEEeCCcHHHHHHHHHHHcCCCHH
Confidence             4689999999974211   1222   234555655555555544322   3468888887655331        23322


Q ss_pred             hhhhh-hHHHHHHHHHHHHHHH
Q 024994          148 SLYGA-YKGAMNQLTKNLACEW  168 (259)
Q Consensus       148 ~~Y~~-sK~a~~~~~~~~a~e~  168 (259)
                      -..+. +-.-...+-..++..+
T Consensus       145 rviG~gt~LD~~R~~~~la~~l  166 (326)
T 2zqz_A          145 RVVGSGTSLDTARFRQSIAEMV  166 (326)
T ss_dssp             GEEECTTHHHHHHHHHHHHHHH
T ss_pred             HEEEccccchHHHHHHHHHHHh
Confidence            23333 2222345556666666

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=96.56  E-value=0.055  Score=45.46  Aligned_cols=118  Identities=13%  Similarity=0.013  Sum_probs=68.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhc------CCcEEEEEecCCCHHHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNK------GFKVTGSVCDLSSREQREKLIETVTS   73 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~   73 (259)
                      +++.|+|+ |.+|.+++..|+..|+ +|++.++++++++....++...      ..++.+.    +|.+   ..+     
T Consensus        10 ~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t----~d~~---ea~-----   76 (331)
T 1pzg_A           10 KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE----YSYE---AAL-----   76 (331)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE----CSHH---HHH-----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEe----CCHH---HHh-----
Confidence            37899998 9999999999999998 9999999998776644333321      1122210    3322   122     


Q ss_pred             HcCCCccEEEEcCCCCCCCCCCC--CCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCc
Q 024994           74 IFQGKLNILINNAAIAFVKPTVD--ITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG  140 (259)
Q Consensus        74 ~~~~~id~vi~~ag~~~~~~~~~--~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~  140 (259)
                         ..-|+||..+|.........  .+.   ...+..|..-...+.+.+..+   ..+..++++|-..+
T Consensus        77 ---~~aDiVi~a~g~p~~~g~~~~~~~r---~dl~~~n~~i~~~i~~~i~~~---~p~a~vi~~tNP~~  136 (331)
T 1pzg_A           77 ---TGADCVIVTAGLTKVPGKPDSEWSR---NDLLPFNSKIIREIGQNIKKY---CPKTFIIVVTNPLD  136 (331)
T ss_dssp             ---TTCSEEEECCSCSSCTTCCGGGCCG---GGGHHHHHHHHHHHHHHHHHH---CTTCEEEECCSSHH
T ss_pred             ---CCCCEEEEccCCCCCCCcccCCCCH---HHHHHHHHHHHHHHHHHHHHH---CCCcEEEEEcCchH
Confidence               46899999999753211100  011   122334444444444444332   23466666655443

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=96.55  E-value=0.0052  Score=52.54  Aligned_cols=76  Identities=25%  Similarity=0.353  Sum_probs=52.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH---HcC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTS---IFQ   76 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~---~~~   76 (259)
                      +++||+|+ |++|...++.+...|+ +|+++++++++.+. .+++   +...   ..|.++.+    ..+.+.+   ..+
T Consensus       184 ~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~-a~~l---Ga~~---vi~~~~~~----~~~~i~~~~~~~~  251 (370)
T 4ej6_A          184 STVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRL-AEEV---GATA---TVDPSAGD----VVEAIAGPVGLVP  251 (370)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHH-HHHH---TCSE---EECTTSSC----HHHHHHSTTSSST
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH-HHHc---CCCE---EECCCCcC----HHHHHHhhhhccC
Confidence            47999998 8999999999999999 89999999887753 3343   3222   13444432    2223333   333


Q ss_pred             CCccEEEEcCCC
Q 024994           77 GKLNILINNAAI   88 (259)
Q Consensus        77 ~~id~vi~~ag~   88 (259)
                      +++|++|.++|.
T Consensus       252 gg~Dvvid~~G~  263 (370)
T 4ej6_A          252 GGVDVVIECAGV  263 (370)
T ss_dssp             TCEEEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            579999999984

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.55  E-value=0.016  Score=46.57  Aligned_cols=78  Identities=13%  Similarity=0.125  Sum_probs=56.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHC-CCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARF-GAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      ++++|.|++|.+|+.+++.+.+. ++.++.+....+.++....   . ...   +..|++.++.....++.+.+   .++
T Consensus         1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~---~-~~D---vvIDfT~p~a~~~~~~~a~~---~g~   70 (245)
T 1p9l_A            1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD---G-NTE---VVIDFTHPDVVMGNLEFLID---NGI   70 (245)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH---T-TCC---EEEECSCTTTHHHHHHHHHH---TTC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc---c-CCc---EEEEccChHHHHHHHHHHHH---cCC
Confidence            47899999999999999999876 8887765543333333221   1 222   46899999888888777665   468


Q ss_pred             cEEEEcCCC
Q 024994           80 NILINNAAI   88 (259)
Q Consensus        80 d~vi~~ag~   88 (259)
                      ++|+-..|.
T Consensus        71 ~~VigTTG~   79 (245)
T 1p9l_A           71 HAVVGTTGF   79 (245)
T ss_dssp             EEEECCCCC
T ss_pred             CEEEcCCCC
Confidence            899888873

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.53  E-value=0.0057  Score=52.00  Aligned_cols=73  Identities=16%  Similarity=0.145  Sum_probs=50.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      +++||+|+ |++|..+++.+...|++|+++++++++++.+. ++   +....   .|..+..+   ..+++   . +++|
T Consensus       181 ~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~-~l---Ga~~v---~~~~~~~~---~~~~~---~-~~~D  245 (360)
T 1piw_A          181 KKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-KM---GADHY---IATLEEGD---WGEKY---F-DTFD  245 (360)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HH---TCSEE---EEGGGTSC---HHHHS---C-SCEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-Hc---CCCEE---EcCcCchH---HHHHh---h-cCCC
Confidence            47999999 99999999988889999999999988876543 33   32221   23332201   11221   1 4799


Q ss_pred             EEEEcCCC
Q 024994           81 ILINNAAI   88 (259)
Q Consensus        81 ~vi~~ag~   88 (259)
                      ++|.++|.
T Consensus       246 ~vid~~g~  253 (360)
T 1piw_A          246 LIVVCASS  253 (360)
T ss_dssp             EEEECCSC
T ss_pred             EEEECCCC
Confidence            99999985

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=96.52  E-value=0.045  Score=45.17  Aligned_cols=114  Identities=8%  Similarity=-0.036  Sum_probs=72.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC--EEEEeeCChhHHHHHHHHHHh----cCCcEEEEEecCCCHHHHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKN----KGFKVTGSVCDLSSREQREKLIETVTSI   74 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~   74 (259)
                      |++.|+|+ |+||..++..|+.++.  .++++|.++++.+-...++..    ..........+  |.+.           
T Consensus         1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~--d~~~-----------   66 (294)
T 2x0j_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGA--DYSL-----------   66 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEES--CGGG-----------
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCC--CHHH-----------
Confidence            57889995 9999999999998885  799999998777665556653    12222222221  2211           


Q ss_pred             cCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC-CCCEEEEecCCC
Q 024994           75 FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVG  139 (259)
Q Consensus        75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~isS~~  139 (259)
                      + ..-|++|..||.....   .++.+   +.++.|..=.-.+.+.    +.+. .++.++.+|-..
T Consensus        67 ~-~~aDvVvitAG~prkp---GmtR~---dLl~~Na~I~~~i~~~----i~~~~p~aivlvvsNPv  121 (294)
T 2x0j_A           67 L-KGSEIIVVTAGLARKP---GMTRL---DLAHKNAGIIKDIAKK----IVENAPESKILVVTNPM  121 (294)
T ss_dssp             G-TTCSEEEECCCCCCCS---SSCHH---HHHHHHHHHHHHHHHH----HHTTSTTCEEEECSSSH
T ss_pred             h-CCCCEEEEecCCCCCC---CCchH---HHHHHHHHHHHHHHHH----HHhcCCceEEEEecCcc
Confidence            1 4689999999975321   23443   3456666544444444    4544 356777777654

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=96.51  E-value=0.037  Score=46.27  Aligned_cols=142  Identities=8%  Similarity=0.077  Sum_probs=81.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC--EEEEeeCChhHHHHHHHHHHhcC---CcEEEEEecCCCHHHHHHHHHHHHHHc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKG---FKVTGSVCDLSSREQREKLIETVTSIF   75 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (259)
                      +++.|+|+ |.+|.+++..|+.++.  .++++|+++++++....++....   ..+.+. .|  +.+.           +
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~-~~--~~~a-----------~   70 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIY-SG--EYSD-----------C   70 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEE-EC--CGGG-----------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEE-EC--CHHH-----------h
Confidence            37999999 9999999999999886  89999999988877666665431   122222 22  2111           2


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHh-CCCCEEEEecCCCccC--------CCCC
Q 024994           76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKA-SGNGSIVFISSVGGVR--------GIPS  146 (259)
Q Consensus        76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~ii~isS~~~~~--------~~~~  146 (259)
                       ..-|+||..+|.....   ..+   -.+.+..|..-...+.+.+    .+ ..++.++++|-.....        +.|+
T Consensus        71 -~~aDvVii~ag~~~~~---g~~---R~dl~~~n~~i~~~i~~~i----~~~~p~a~iiv~tNPv~~~t~~~~k~s~~p~  139 (318)
T 1ez4_A           71 -KDADLVVITAGAPQKP---GES---RLDLVNKNLNILSSIVKPV----VDSGFDGIFLVAANPVDILTYATWKFSGFPK  139 (318)
T ss_dssp             -TTCSEEEECCCC----------------CHHHHHHHHHHHHHHH----HHTTCCSEEEECSSSHHHHHHHHHHHHCCCG
T ss_pred             -CCCCEEEECCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHH----HHhCCCeEEEEeCCcHHHHHHHHHHHcCCCH
Confidence             4799999999974221   111   1223445555444444444    43 3467888886654321        2332


Q ss_pred             Chhhhh-hHHHHHHHHHHHHHHH
Q 024994          147 VSLYGA-YKGAMNQLTKNLACEW  168 (259)
Q Consensus       147 ~~~Y~~-sK~a~~~~~~~~a~e~  168 (259)
                      .-..+. +-.-...+-..++..+
T Consensus       140 ~rviG~gt~LD~~R~~~~la~~l  162 (318)
T 1ez4_A          140 ERVIGSGTSLDSSRLRVALGKQF  162 (318)
T ss_dssp             GGEEECTTHHHHHHHHHHHHHHH
T ss_pred             HHEEeccccchHHHHHHHHHHHh
Confidence            222333 2222345556666666

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.49  E-value=0.0039  Score=52.74  Aligned_cols=67  Identities=22%  Similarity=0.257  Sum_probs=49.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      +++||+|+ |++|...++.+...|++|+++++++++.+.+ ++   .+....+     ++.+.+.           ..+|
T Consensus       178 ~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~---lGa~~v~-----~~~~~~~-----------~~~D  236 (348)
T 3two_A          178 TKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDA-LS---MGVKHFY-----TDPKQCK-----------EELD  236 (348)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHH-HH---TTCSEEE-----SSGGGCC-----------SCEE
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-Hh---cCCCeec-----CCHHHHh-----------cCCC
Confidence            47999997 9999999999999999999999999887644 22   2433322     3322211           2699


Q ss_pred             EEEEcCCC
Q 024994           81 ILINNAAI   88 (259)
Q Consensus        81 ~vi~~ag~   88 (259)
                      ++|.++|.
T Consensus       237 ~vid~~g~  244 (348)
T 3two_A          237 FIISTIPT  244 (348)
T ss_dssp             EEEECCCS
T ss_pred             EEEECCCc
Confidence            99999985

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.48  E-value=0.009  Score=51.38  Aligned_cols=39  Identities=21%  Similarity=0.226  Sum_probs=35.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDAR   40 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~   40 (259)
                      ++++|+|+ |.+|..+++.+...|++|++++|+.++++..
T Consensus       173 ~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~  211 (384)
T 1l7d_A          173 ARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQV  211 (384)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            58999997 8999999999999999999999998877654

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=96.48  E-value=0.0042  Score=52.33  Aligned_cols=70  Identities=11%  Similarity=0.018  Sum_probs=56.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHH-HHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKL-IETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~~~~~~~~i   79 (259)
                      +.++|.|+ |.+|..+++.|.++|. |++++++++..+ .. +     ..+.++.+|.+|++.++++ +        .+.
T Consensus       116 ~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~-~-----~~~~~i~gd~~~~~~L~~a~i--------~~a  178 (336)
T 1lnq_A          116 RHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VL-R-----SGANFVHGDPTRVSDLEKANV--------RGA  178 (336)
T ss_dssp             CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HH-H-----TTCEEEESCTTSHHHHHHTCS--------TTE
T ss_pred             CCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HH-h-----CCcEEEEeCCCCHHHHHhcCh--------hhc
Confidence            36899997 9999999999999999 999999998876 32 2     2577889999999887654 2        467


Q ss_pred             cEEEEcCC
Q 024994           80 NILINNAA   87 (259)
Q Consensus        80 d~vi~~ag   87 (259)
                      |.+|.+.+
T Consensus       179 ~~vi~~~~  186 (336)
T 1lnq_A          179 RAVIVDLE  186 (336)
T ss_dssp             EEEEECCS
T ss_pred             cEEEEcCC
Confidence            88887664

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=96.46  E-value=0.0014  Score=55.77  Aligned_cols=35  Identities=17%  Similarity=0.309  Sum_probs=29.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChh
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI   35 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~   35 (259)
                      +++||+|++|++|...++.+...|++|+.+.++.+
T Consensus       169 ~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~  203 (357)
T 1zsy_A          169 DSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRP  203 (357)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCS
T ss_pred             CEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCcc
Confidence            47999999999999999988888998888776543

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.42  E-value=0.0026  Score=51.48  Aligned_cols=39  Identities=21%  Similarity=0.256  Sum_probs=34.1

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHH
Q 024994            2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARL   41 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~   41 (259)
                      +++|.|+ ||.|++++..|.+.|+ +|++++|+.++.+++.
T Consensus       110 ~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la  149 (253)
T 3u62_A          110 PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALD  149 (253)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCC
T ss_pred             eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH
Confidence            4788987 8999999999999998 8999999988776543

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.41  E-value=0.0054  Score=50.41  Aligned_cols=41  Identities=20%  Similarity=0.131  Sum_probs=36.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLH   42 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~   42 (259)
                      |++||+|+ ||.|++++..|.+.|+ +|+++.|+.++.+++.+
T Consensus       123 k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~  164 (282)
T 3fbt_A          123 NICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYG  164 (282)
T ss_dssp             SEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCT
T ss_pred             CEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence            68999998 7999999999999998 89999999988776643

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.40  E-value=0.013  Score=49.10  Aligned_cols=86  Identities=12%  Similarity=0.094  Sum_probs=58.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHH-------HHhcCCcEEEEEecCCCHHHHHHHHH--HH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE-------WKNKGFKVTGSVCDLSSREQREKLIE--TV   71 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~D~~~~~~~~~~~~--~~   71 (259)
                      |++.|.|. |.+|..+++.|++.|++|++.+|++++.+.+.+.       +.+.-....++..-+.+...++.++.  .+
T Consensus        32 ~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~~~~  110 (320)
T 4dll_A           32 RKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDVLFAQGV  110 (320)
T ss_dssp             SEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTTTCH
T ss_pred             CEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcchhH
Confidence            47888876 9999999999999999999999999887665432       00000123344455566667777775  55


Q ss_pred             HHHcCCCccEEEEcCCC
Q 024994           72 TSIFQGKLNILINNAAI   88 (259)
Q Consensus        72 ~~~~~~~id~vi~~ag~   88 (259)
                      .+.. .+-.++|++...
T Consensus       111 ~~~l-~~~~~vi~~st~  126 (320)
T 4dll_A          111 AAAM-KPGSLFLDMASI  126 (320)
T ss_dssp             HHHC-CTTCEEEECSCC
T ss_pred             HhhC-CCCCEEEecCCC
Confidence            5555 345567776653

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=96.38  E-value=0.084  Score=44.57  Aligned_cols=114  Identities=18%  Similarity=0.129  Sum_probs=68.1

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCC-------EEEEeeCChh--HHHHHHHHHHhcCC--cEEEEEecCCCHHHHHHHHHH
Q 024994            2 TALVTGGTRGIGHATVEELARFGA-------IVHTCSRNQI--ELDARLHEWKNKGF--KVTGSVCDLSSREQREKLIET   70 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~-------~V~~~~r~~~--~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~   70 (259)
                      +|.|+||+|+||..++..|++...       .+.++|.++.  .++-...+++....  .......  ++..   ..   
T Consensus        26 KVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~--~~~~---~a---   97 (345)
T 4h7p_A           26 KVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVT--ADPR---VA---   97 (345)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEE--SCHH---HH---
T ss_pred             EEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEc--CChH---HH---
Confidence            689999999999999999988643       6899998763  34444555554321  1222222  1221   11   


Q ss_pred             HHHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC--CCCEEEEecCC
Q 024994           71 VTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS--GNGSIVFISSV  138 (259)
Q Consensus        71 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~ii~isS~  138 (259)
                          + ..-|++|..||.....   .++.++   .++.|..-.-.+.+.+    .+.  ++..|+.+|-.
T Consensus        98 ----~-~~advVvi~aG~prkp---GmtR~D---Ll~~Na~I~~~~~~~i----~~~a~~~~~vlvvsNP  152 (345)
T 4h7p_A           98 ----F-DGVAIAIMCGAFPRKA---GMERKD---LLEMNARIFKEQGEAI----AAVAASDCRVVVVGNP  152 (345)
T ss_dssp             ----T-TTCSEEEECCCCCCCT---TCCHHH---HHHHHHHHHHHHHHHH----HHHSCTTCEEEECSSS
T ss_pred             ----h-CCCCEEEECCCCCCCC---CCCHHH---HHHHhHHHHHHHHHHH----HhhccCceEEEEeCCC
Confidence                2 4799999999975321   244433   4566665444444443    442  23456666664

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.38  E-value=0.011  Score=48.47  Aligned_cols=35  Identities=23%  Similarity=0.360  Sum_probs=32.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChh
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI   35 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~   35 (259)
                      |+++|.|.|+-+|+.++..|.++|++|.++.++..
T Consensus       161 k~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~  195 (285)
T 3p2o_A          161 KDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTK  195 (285)
T ss_dssp             CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCch
Confidence            68999999999999999999999999999987653

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=96.36  E-value=0.016  Score=48.91  Aligned_cols=75  Identities=19%  Similarity=0.244  Sum_probs=50.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHC-CCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC-C
Q 024994            1 MTALVTGGTRGIGHATVEELARF-GAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG-K   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~-~   78 (259)
                      +++||+|+ |++|...++.+... |.+|+.+++++++++.+ +++   +....   .|..+ +    ..+++.+..++ .
T Consensus       173 ~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~-~~l---Ga~~~---i~~~~-~----~~~~v~~~t~g~g  239 (345)
T 3jv7_A          173 STAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALA-REV---GADAA---VKSGA-G----AADAIRELTGGQG  239 (345)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHH-HHT---TCSEE---EECST-T----HHHHHHHHHGGGC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-HHc---CCCEE---EcCCC-c----HHHHHHHHhCCCC
Confidence            47899998 99999988877777 78999999999887644 332   33322   22222 2    22233333222 6


Q ss_pred             ccEEEEcCCC
Q 024994           79 LNILINNAAI   88 (259)
Q Consensus        79 id~vi~~ag~   88 (259)
                      +|++|.++|.
T Consensus       240 ~d~v~d~~G~  249 (345)
T 3jv7_A          240 ATAVFDFVGA  249 (345)
T ss_dssp             EEEEEESSCC
T ss_pred             CeEEEECCCC
Confidence            9999999994

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=96.35  E-value=0.059  Score=45.10  Aligned_cols=119  Identities=12%  Similarity=0.079  Sum_probs=68.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhc------CCcEEEEEecCCCHHHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNK------GFKVTGSVCDLSSREQREKLIETVTS   73 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~   73 (259)
                      +++.|+|+ |.+|..++..|+.+|. +|+++++++++++....++...      ..++...    +|.+    .      
T Consensus         5 ~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t----~d~~----a------   69 (322)
T 1t2d_A            5 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS----NTYD----D------   69 (322)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE----CCGG----G------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC----CCHH----H------
Confidence            47899998 9999999999999998 9999999988876555444421      1122211    2211    1      


Q ss_pred             HcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCc
Q 024994           74 IFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG  140 (259)
Q Consensus        74 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~  140 (259)
                       + ..-|+||.++|.............. .+.+..|..-...+.+.+.++   ..++.++++|-...
T Consensus        70 -l-~~aD~Vi~a~g~p~k~g~~~qe~~r-~dl~~~n~~i~~~i~~~i~~~---~p~a~iiv~tNP~~  130 (322)
T 1t2d_A           70 -L-AGADVVIVTAGFTKAPGKSDKEWNR-DDLLPLNNKIMIEIGGHIKKN---CPNAFIIVVTNPVD  130 (322)
T ss_dssp             -G-TTCSEEEECCSCSSCTTCCSTTCCG-GGGHHHHHHHHHHHHHHHHHH---CTTSEEEECSSSHH
T ss_pred             -h-CCCCEEEEeCCCCCCCCCCcccccH-HHHHHHHHHHHHHHHHHHHHH---CCCeEEEEecCChH
Confidence             1 4789999999965321111000000 112334444444444444332   24567777766443

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=96.32  E-value=0.048  Score=45.44  Aligned_cols=39  Identities=13%  Similarity=-0.027  Sum_probs=34.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDAR   40 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~   40 (259)
                      +++.|+|+ |.+|..++..|++.|+ +|++.+++++.++..
T Consensus         5 ~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~   44 (317)
T 2ewd_A            5 RKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGK   44 (317)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHH
Confidence            47899998 9999999999999998 999999998877653

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=96.29  E-value=0.0093  Score=50.48  Aligned_cols=76  Identities=16%  Similarity=0.194  Sum_probs=51.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC-C
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG-K   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~-~   78 (259)
                      +++||+|+ |++|...++.+...|+ +|+.+++++++++.+ +++   +... +  .|..+.+    ..+++.+..++ +
T Consensus       168 ~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~l---Ga~~-v--i~~~~~~----~~~~v~~~t~g~g  235 (352)
T 3fpc_A          168 DTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIA-LEY---GATD-I--INYKNGD----IVEQILKATDGKG  235 (352)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHH-HHH---TCCE-E--ECGGGSC----HHHHHHHHTTTCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHh---CCce-E--EcCCCcC----HHHHHHHHcCCCC
Confidence            36899985 9999999998888999 899999998877543 333   3222 1  2333322    23334444333 5


Q ss_pred             ccEEEEcCCC
Q 024994           79 LNILINNAAI   88 (259)
Q Consensus        79 id~vi~~ag~   88 (259)
                      +|++|.++|.
T Consensus       236 ~D~v~d~~g~  245 (352)
T 3fpc_A          236 VDKVVIAGGD  245 (352)
T ss_dssp             EEEEEECSSC
T ss_pred             CCEEEECCCC
Confidence            9999999985

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=96.27  E-value=0.0039  Score=52.29  Aligned_cols=39  Identities=33%  Similarity=0.382  Sum_probs=35.1

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHH
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDAR   40 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~   40 (259)
                      ++||+|++|++|..+++.+...|++|+.+++++++++.+
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~  191 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL  191 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            699999999999999999999999999999988776554

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=96.25  E-value=0.066  Score=44.66  Aligned_cols=74  Identities=12%  Similarity=0.063  Sum_probs=51.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC--EEEEeeCChhHHHHHHHHHHhcC----CcEEEEEecCCCHHHHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKG----FKVTGSVCDLSSREQREKLIETVTSI   74 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~   74 (259)
                      +++.|+|+ |.+|.+++..|+.+|.  .|+++|+++++++....++.+..    ..+.+. .|  +.+.           
T Consensus         7 ~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~-~~--~~~a-----------   71 (316)
T 1ldn_A            7 ARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIW-HG--DYDD-----------   71 (316)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEE-EC--CGGG-----------
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEE-cC--cHHH-----------
Confidence            47899999 9999999999998885  89999999886665555554321    122222 11  2111           


Q ss_pred             cCCCccEEEEcCCCCC
Q 024994           75 FQGKLNILINNAAIAF   90 (259)
Q Consensus        75 ~~~~id~vi~~ag~~~   90 (259)
                      + ..-|+||.+++...
T Consensus        72 l-~~aDvViia~~~~~   86 (316)
T 1ldn_A           72 C-RDADLVVICAGANQ   86 (316)
T ss_dssp             T-TTCSEEEECCSCCC
T ss_pred             h-CCCCEEEEcCCCCC
Confidence            2 47899999999753

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=96.23  E-value=0.027  Score=45.49  Aligned_cols=86  Identities=12%  Similarity=0.105  Sum_probs=56.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCE-EEEeeCChhHHHHHHHHHH--------hcCCcEEEEEecCCCHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAI-VHTCSRNQIELDARLHEWK--------NKGFKVTGSVCDLSSREQREKLIETV   71 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~--------~~~~~~~~~~~D~~~~~~~~~~~~~~   71 (259)
                      +++.|.|+ |.+|..+++.|.+.|++ |.+++|+.++.+.+.+++.        +.-....++..-+. ...+..+++++
T Consensus        11 m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av~-~~~~~~v~~~l   88 (266)
T 3d1l_A           11 TPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSLK-DSAFAELLQGI   88 (266)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECCC-HHHHHHHHHHH
T ss_pred             CeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEecC-HHHHHHHHHHH
Confidence            35788987 99999999999999998 8999999988877655421        10012223333333 33557777776


Q ss_pred             HHHcCCCccEEEEcCCCC
Q 024994           72 TSIFQGKLNILINNAAIA   89 (259)
Q Consensus        72 ~~~~~~~id~vi~~ag~~   89 (259)
                      .+.. .+=.+++++.+..
T Consensus        89 ~~~~-~~~~ivv~~s~~~  105 (266)
T 3d1l_A           89 VEGK-REEALMVHTAGSI  105 (266)
T ss_dssp             HTTC-CTTCEEEECCTTS
T ss_pred             Hhhc-CCCcEEEECCCCC
Confidence            5544 2334677777654

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=96.23  E-value=0.023  Score=51.31  Aligned_cols=57  Identities=14%  Similarity=0.183  Sum_probs=41.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCC-------------------hhHHHHHHHHHHhcC--CcEEEEEecC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRN-------------------QIELDARLHEWKNKG--FKVTGSVCDL   58 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~-------------------~~~~~~~~~~~~~~~--~~~~~~~~D~   58 (259)
                      ++|+|.|+ ||+|.++++.|+..|. ++.++|.+                   ..+.+.+.+.+.+..  .++..+..++
T Consensus       328 ~kVLIVGa-GGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~v~v~~~~~~I  406 (598)
T 3vh1_A          328 TKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKLSI  406 (598)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTTCEEEEECCCC
T ss_pred             CeEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCCcEEEEEeccc
Confidence            47899998 8999999999999997 78888654                   246666666666543  3444444443

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=96.22  E-value=0.11  Score=43.55  Aligned_cols=72  Identities=14%  Similarity=0.105  Sum_probs=50.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhc------CCcEEEEEecCCCHHHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNK------GFKVTGSVCDLSSREQREKLIETVTS   73 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~   73 (259)
                      +++.|+|+ |.+|..++..|+..|. +|++.+++++.++....++...      ..++... .|.   +    .      
T Consensus        15 ~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d~---~----a------   79 (328)
T 2hjr_A           15 KKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGE-NNY---E----Y------   79 (328)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE-SCG---G----G------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEEC-CCH---H----H------
Confidence            36899998 9999999999999998 9999999998777533333221      1122211 221   1    1      


Q ss_pred             HcCCCccEEEEcCCCC
Q 024994           74 IFQGKLNILINNAAIA   89 (259)
Q Consensus        74 ~~~~~id~vi~~ag~~   89 (259)
                       + ..-|+||..+|..
T Consensus        80 -l-~~aD~VI~avg~p   93 (328)
T 2hjr_A           80 -L-QNSDVVIITAGVP   93 (328)
T ss_dssp             -G-TTCSEEEECCSCC
T ss_pred             -H-CCCCEEEEcCCCC
Confidence             1 4689999999975

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=96.20  E-value=0.036  Score=45.09  Aligned_cols=40  Identities=28%  Similarity=0.277  Sum_probs=35.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARL   41 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~   41 (259)
                      |++.|.| .|.+|.++++.|.+.|++|++++|++++.+.+.
T Consensus         1 m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~   40 (279)
T 2f1k_A            1 MKIGVVG-LGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAV   40 (279)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CEEEEEc-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence            5788999 599999999999999999999999998876643

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=96.20  E-value=0.0085  Score=49.89  Aligned_cols=66  Identities=14%  Similarity=0.132  Sum_probs=45.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      +++||+|+ |++|...++.+...|++|+.++ ++++.+.+ +++   +... .+  |  |   .+    ++    +.++|
T Consensus       144 ~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~-~~l---Ga~~-v~--~--d---~~----~v----~~g~D  201 (315)
T 3goh_A          144 REVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALA-AKR---GVRH-LY--R--E---PS----QV----TQKYF  201 (315)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHH-HHH---TEEE-EE--S--S---GG----GC----CSCEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHH-HHc---CCCE-EE--c--C---HH----Hh----CCCcc
Confidence            47999999 9999999999888999999999 77776544 333   3221 22  2  2   11    11    36799


Q ss_pred             EEEEcCCC
Q 024994           81 ILINNAAI   88 (259)
Q Consensus        81 ~vi~~ag~   88 (259)
                      ++|.++|.
T Consensus       202 vv~d~~g~  209 (315)
T 3goh_A          202 AIFDAVNS  209 (315)
T ss_dssp             EEECC---
T ss_pred             EEEECCCc
Confidence            99999985

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=96.19  E-value=0.014  Score=48.36  Aligned_cols=85  Identities=13%  Similarity=0.091  Sum_probs=56.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHH-----HHhc---CCcEEEEEecCCCHHHHHHHH---H
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE-----WKNK---GFKVTGSVCDLSSREQREKLI---E   69 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~-----~~~~---~~~~~~~~~D~~~~~~~~~~~---~   69 (259)
                      |++.|.|. |.+|..+++.|++.|++|++.+|++++.+.+.+.     ..+.   -....++..-+.+...++.++   +
T Consensus         8 ~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~v~~~~~   86 (303)
T 3g0o_A            8 FHVGIVGL-GSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQVLFGED   86 (303)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSSHHHHHHHHC--C
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEEECCCHHHHHHHHhChh
Confidence            46788875 9999999999999999999999999888766542     0000   012344455555666666665   4


Q ss_pred             HHHHHcCCCccEEEEcCC
Q 024994           70 TVTSIFQGKLNILINNAA   87 (259)
Q Consensus        70 ~~~~~~~~~id~vi~~ag   87 (259)
                      ++.+.. .+-.++|++..
T Consensus        87 ~l~~~l-~~g~ivv~~st  103 (303)
T 3g0o_A           87 GVAHLM-KPGSAVMVSST  103 (303)
T ss_dssp             CCGGGS-CTTCEEEECSC
T ss_pred             hHHhhC-CCCCEEEecCC
Confidence            444443 23456666655

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=96.17  E-value=0.011  Score=49.18  Aligned_cols=85  Identities=16%  Similarity=0.030  Sum_probs=55.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHH-------HHhcCCcEEEEEecCCCHHHHHHHH---HH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE-------WKNKGFKVTGSVCDLSSREQREKLI---ET   70 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~D~~~~~~~~~~~---~~   70 (259)
                      |++.|.|. |.+|..+++.|++.|++|++.+|++++.+.+.+.       ..+.-....++..-+.+...++.++   ++
T Consensus        22 ~~I~iIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~  100 (310)
T 3doj_A           22 MEVGFLGL-GIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSDPCAALSVVFDKGG  100 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEEcCCHHHHHHHHhCchh
Confidence            46888876 8999999999999999999999999877665421       0000002334444555666666666   44


Q ss_pred             HHHHcCCCccEEEEcCC
Q 024994           71 VTSIFQGKLNILINNAA   87 (259)
Q Consensus        71 ~~~~~~~~id~vi~~ag   87 (259)
                      +.... .+-.++|++..
T Consensus       101 l~~~l-~~g~~vv~~st  116 (310)
T 3doj_A          101 VLEQI-CEGKGYIDMST  116 (310)
T ss_dssp             GGGGC-CTTCEEEECSC
T ss_pred             hhhcc-CCCCEEEECCC
Confidence            44433 23456666655

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=96.15  E-value=0.21  Score=41.36  Aligned_cols=114  Identities=10%  Similarity=0.031  Sum_probs=67.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC--EEEEeeCChhHHHHHHHHHHhc---CCcEEEEEecCCCHHHHHHHHHHHHHHc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNK---GFKVTGSVCDLSSREQREKLIETVTSIF   75 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (259)
                      +++.|.|+ |.+|..++..|++.|.  +|++++|+.++++....++...   .........  ++.+.           +
T Consensus         8 mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~-----------~   73 (319)
T 1lld_A            8 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDPEI-----------C   73 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCGGG-----------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeC--CCHHH-----------h
Confidence            47899998 9999999999999998  9999999987765322222111   111121111  12111           1


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCC
Q 024994           76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSV  138 (259)
Q Consensus        76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~  138 (259)
                       ...|+||.+++....   ...+..   +.+..|..-.-.+++.+.++   ..+..|+.++-.
T Consensus        74 -~~aD~Vii~v~~~~~---~g~~r~---~~~~~n~~~~~~~~~~i~~~---~~~~~vi~~~Np  126 (319)
T 1lld_A           74 -RDADMVVITAGPRQK---PGQSRL---ELVGATVNILKAIMPNLVKV---APNAIYMLITNP  126 (319)
T ss_dssp             -TTCSEEEECCCCCCC---TTCCHH---HHHHHHHHHHHHHHHHHHHH---CTTSEEEECCSS
T ss_pred             -CCCCEEEECCCCCCC---CCCCHH---HHHHHHHHHHHHHHHHHHHh---CCCceEEEecCc
Confidence             468999999986422   112322   34555655555555555442   234566665554

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=96.11  E-value=0.085  Score=43.50  Aligned_cols=39  Identities=21%  Similarity=0.175  Sum_probs=35.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDAR   40 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~   40 (259)
                      |++.|.|+ |.+|..+|..|++.|++|++.+|+++.++..
T Consensus        16 ~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~   54 (302)
T 1f0y_A           16 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKS   54 (302)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHH
Confidence            46889998 9999999999999999999999999877654

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=96.05  E-value=0.034  Score=45.56  Aligned_cols=82  Identities=17%  Similarity=0.109  Sum_probs=57.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC---EEEEeeCChhHHHHHHHHHH--------h--cCCcEEEEEecCCCHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA---IVHTCSRNQIELDARLHEWK--------N--KGFKVTGSVCDLSSREQREKL   67 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~---~V~~~~r~~~~~~~~~~~~~--------~--~~~~~~~~~~D~~~~~~~~~~   67 (259)
                      |++.|.|+ |.+|.++++.|.+.|+   +|++++|++++.+.+.++..        +  ....+.++.+   .++.+..+
T Consensus         4 ~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav---~p~~~~~v   79 (280)
T 3tri_A            4 SNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV---KPHQIKMV   79 (280)
T ss_dssp             SCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS---CGGGHHHH
T ss_pred             CEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe---CHHHHHHH
Confidence            46788888 9999999999999998   89999999998877655321        0  1223444333   23566777


Q ss_pred             HHHHHHH-cCCCcc-EEEEcCCC
Q 024994           68 IETVTSI-FQGKLN-ILINNAAI   88 (259)
Q Consensus        68 ~~~~~~~-~~~~id-~vi~~ag~   88 (259)
                      ++++... +  +.+ ++|++++.
T Consensus        80 l~~l~~~~l--~~~~iiiS~~ag  100 (280)
T 3tri_A           80 CEELKDILS--ETKILVISLAVG  100 (280)
T ss_dssp             HHHHHHHHH--TTTCEEEECCTT
T ss_pred             HHHHHhhcc--CCCeEEEEecCC
Confidence            7777765 5  234 77776654

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=95.99  E-value=0.02  Score=48.60  Aligned_cols=77  Identities=17%  Similarity=0.199  Sum_probs=54.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCCh-------------------hHHHHHHHHHHhc--CCcEEEEEecC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQ-------------------IELDARLHEWKNK--GFKVTGSVCDL   58 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~--~~~~~~~~~D~   58 (259)
                      ++|+|.|+ ||+|.++++.|+..|. ++.++|++.                   .+.+.+.+.+...  ..++..+..++
T Consensus       119 ~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~i  197 (353)
T 3h5n_A          119 AKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIALNI  197 (353)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEECCC
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEeeccc
Confidence            47899998 8999999999999997 788888763                   2444555555543  44566666777


Q ss_pred             CCHHHHHHHHHHHHHHcCCCccEEEEcCC
Q 024994           59 SSREQREKLIETVTSIFQGKLNILINNAA   87 (259)
Q Consensus        59 ~~~~~~~~~~~~~~~~~~~~id~vi~~ag   87 (259)
                      +....+..        + .+.|+||.+..
T Consensus       198 ~~~~~~~~--------~-~~~DlVvd~~D  217 (353)
T 3h5n_A          198 NDYTDLHK--------V-PEADIWVVSAD  217 (353)
T ss_dssp             CSGGGGGG--------S-CCCSEEEECCC
T ss_pred             CchhhhhH--------h-ccCCEEEEecC
Confidence            65432221        3 57899998764

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=95.98  E-value=0.023  Score=46.97  Aligned_cols=79  Identities=13%  Similarity=0.100  Sum_probs=51.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      +++.|.||.|.+|.++++.|.+.|++|++++|+.+...  .+.+.  ...+.++.+-...   +..+++++.... .+=.
T Consensus        22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~~~--~~~~~--~aDvVilavp~~~---~~~vl~~l~~~l-~~~~   93 (298)
T 2pv7_A           22 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVA--ESILA--NADVVIVSVPINL---TLETIERLKPYL-TENM   93 (298)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGH--HHHHT--TCSEEEECSCGGG---HHHHHHHHGGGC-CTTS
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcccCH--HHHhc--CCCEEEEeCCHHH---HHHHHHHHHhhc-CCCc
Confidence            46889998999999999999999999999999875311  11111  2345555544332   566677665544 2223


Q ss_pred             EEEEcCC
Q 024994           81 ILINNAA   87 (259)
Q Consensus        81 ~vi~~ag   87 (259)
                      +|+..++
T Consensus        94 iv~~~~s  100 (298)
T 2pv7_A           94 LLADLTS  100 (298)
T ss_dssp             EEEECCS
T ss_pred             EEEECCC
Confidence            5555554

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=95.93  E-value=0.012  Score=48.15  Aligned_cols=43  Identities=19%  Similarity=0.213  Sum_probs=38.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEW   44 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~   44 (259)
                      |+++|.|+ ||.|++++..|.+.|+ +|+++.|+.++.+++.+++
T Consensus       120 ~~vlvlGa-Ggaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~  163 (271)
T 1npy_A          120 AKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY  163 (271)
T ss_dssp             SCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence            57899996 8999999999999997 7999999999888877665

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=95.91  E-value=0.011  Score=46.37  Aligned_cols=39  Identities=18%  Similarity=0.096  Sum_probs=34.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDAR   40 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~   40 (259)
                      +++.|+| +|.+|.++++.|.+.|++|++++|+.++.+.+
T Consensus        29 ~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~   67 (215)
T 2vns_A           29 PKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTARL   67 (215)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHHH
T ss_pred             CEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            4688998 69999999999999999999999998776543

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=95.91  E-value=0.025  Score=46.29  Aligned_cols=34  Identities=29%  Similarity=0.385  Sum_probs=30.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCCh
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ   34 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~   34 (259)
                      |+++|.|.|+-+|+.++..|..+|++|.++.|+.
T Consensus       162 k~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t  195 (285)
T 3l07_A          162 AYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT  195 (285)
T ss_dssp             CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc
Confidence            6899999988899999999999999999998754

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=95.87  E-value=0.06  Score=45.73  Aligned_cols=85  Identities=16%  Similarity=0.132  Sum_probs=53.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHH----------HHhcCCcEEEEEecCCCHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE----------WKNKGFKVTGSVCDLSSREQREKLIET   70 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~----------~~~~~~~~~~~~~D~~~~~~~~~~~~~   70 (259)
                      |++.|.|. |.+|..+++.|++.|++|++.+|+.++.+.+.+.          +........++..-+.+. .++.++++
T Consensus        23 mkIgiIGl-G~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~-~v~~vl~~  100 (358)
T 4e21_A           23 MQIGMIGL-GRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAA-VVDSMLQR  100 (358)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGG-GHHHHHHH
T ss_pred             CEEEEECc-hHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHH-HHHHHHHH
Confidence            46888885 9999999999999999999999999877654321          111010012223333333 56666666


Q ss_pred             HHHHcCCCccEEEEcCCC
Q 024994           71 VTSIFQGKLNILINNAAI   88 (259)
Q Consensus        71 ~~~~~~~~id~vi~~ag~   88 (259)
                      +.... .+=++||.+...
T Consensus       101 l~~~l-~~g~iiId~st~  117 (358)
T 4e21_A          101 MTPLL-AANDIVIDGGNS  117 (358)
T ss_dssp             HGGGC-CTTCEEEECSSC
T ss_pred             HHhhC-CCCCEEEeCCCC
Confidence            65544 334566666553

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=95.87  E-value=0.11  Score=43.11  Aligned_cols=143  Identities=15%  Similarity=0.131  Sum_probs=81.9

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhc----CCcEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024994            2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNK----GFKVTGSVCDLSSREQREKLIETVTSIFQ   76 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (259)
                      ++.|+|+ |.+|..++..|+.+|. .|++.|+++++++....++...    .....+...  +|.+    .       + 
T Consensus         1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~----a-------~-   65 (308)
T 2d4a_B            1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGS--NSYE----D-------M-   65 (308)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE--SCGG----G-------G-
T ss_pred             CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEEC--CCHH----H-------h-
Confidence            3678998 9999999999999887 6999999988876655555431    112222221  2211    1       1 


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccC--------CCCCCh
Q 024994           77 GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR--------GIPSVS  148 (259)
Q Consensus        77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~--------~~~~~~  148 (259)
                      ..-|+||..+|.....   ..+..   +.+..|..-...+.+.+..+   ..++.+|++|-.....        +.|+.-
T Consensus        66 ~~aD~Vi~~ag~~~k~---G~~r~---dl~~~n~~i~~~i~~~i~~~---~p~a~iiv~tNPv~~~t~~~~k~~~~p~~r  136 (308)
T 2d4a_B           66 RGSDIVLVTAGIGRKP---GMTRE---QLLEANANTMADLAEKIKAY---AKDAIVVITTNPVDAMTYVMYKKTGFPRER  136 (308)
T ss_dssp             TTCSEEEECCSCCCCS---SCCTH---HHHHHHHHHHHHHHHHHHHH---CTTCEEEECCSSHHHHHHHHHHHHCCCGGG
T ss_pred             CCCCEEEEeCCCCCCC---CCcHH---HHHHHHHHHHHHHHHHHHHH---CCCeEEEEeCCchHHHHHHHHHhcCCChhh
Confidence            4799999999975321   12222   23445554444444444222   3467888876644321        233333


Q ss_pred             hhhh-hHHHHHHHHHHHHHHH
Q 024994          149 LYGA-YKGAMNQLTKNLACEW  168 (259)
Q Consensus       149 ~Y~~-sK~a~~~~~~~~a~e~  168 (259)
                      ..+. +-.-...+-..++..+
T Consensus       137 viG~gt~LD~~R~~~~la~~l  157 (308)
T 2d4a_B          137 VIGFSGILDSARMAYYISQKL  157 (308)
T ss_dssp             EEECCHHHHHHHHHHHHHHHH
T ss_pred             EEEecccchHHHHHHHHHHHh
Confidence            3333 2223445556666666

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=95.85  E-value=0.0089  Score=49.12  Aligned_cols=85  Identities=15%  Similarity=0.040  Sum_probs=54.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHH-------HHhcCCcEEEEEecCCCHHHHHHHH---HH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE-------WKNKGFKVTGSVCDLSSREQREKLI---ET   70 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~D~~~~~~~~~~~---~~   70 (259)
                      |++.|.| .|.+|..+++.|++.|++|++.+|++++.+.+.+.       ..+.-....++..-+.+...++.++   ++
T Consensus         2 ~~I~iiG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~advvi~~v~~~~~~~~v~~~~~~   80 (287)
T 3pdu_A            2 TTYGFLG-LGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQASSPAEVCAACDITIAMLADPAAAREVCFGANG   80 (287)
T ss_dssp             CCEEEEC-CSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred             CeEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHHcCCEEEEEcCCHHHHHHHHcCchh
Confidence            4677887 59999999999999999999999999887665432       0000012334444555555666666   44


Q ss_pred             HHHHcCCCccEEEEcCC
Q 024994           71 VTSIFQGKLNILINNAA   87 (259)
Q Consensus        71 ~~~~~~~~id~vi~~ag   87 (259)
                      +.+.. .+-.++|++..
T Consensus        81 l~~~l-~~g~~vv~~st   96 (287)
T 3pdu_A           81 VLEGI-GGGRGYIDMST   96 (287)
T ss_dssp             GGGTC-CTTCEEEECSC
T ss_pred             hhhcc-cCCCEEEECCC
Confidence            44433 23456666655

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=95.79  E-value=0.022  Score=48.50  Aligned_cols=43  Identities=21%  Similarity=0.214  Sum_probs=38.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEW   44 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~   44 (259)
                      |+++|+|. |.+|..+|++|.+.|++|++.+++.+++++..++.
T Consensus       174 ktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~  216 (364)
T 1leh_A          174 LAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE  216 (364)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence            68999997 88999999999999999999999988877766554

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=95.79  E-value=0.16  Score=43.36  Aligned_cols=116  Identities=11%  Similarity=0.033  Sum_probs=67.9

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCC--E---EEEeeC----ChhHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHH
Q 024994            2 TALVTGGTRGIGHATVEELARFGA--I---VHTCSR----NQIELDARLHEWKNKGF-KVTGSVCDLSSREQREKLIETV   71 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~--~---V~~~~r----~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~   71 (259)
                      +|.||||+|.||.+++..|+..+.  .   +++.+.    +.++++-...+++.... -..-+..- ++.   ...    
T Consensus        34 KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~i~-~~~---y~~----  105 (375)
T 7mdh_A           34 NIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIG-IDP---YEV----  105 (375)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE-SCH---HHH----
T ss_pred             EEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcEEe-cCC---HHH----
Confidence            689999999999999999999875  2   666443    44456656666664321 11111211 121   111    


Q ss_pred             HHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHh--CCCCEEEEecCCC
Q 024994           72 TSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKA--SGNGSIVFISSVG  139 (259)
Q Consensus        72 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~~ii~isS~~  139 (259)
                         + ..-|++|..||....   ..++.   .+.++.|..-.-.+.+    .+.+  ..++.++++|...
T Consensus       106 ---~-~daDvVVitag~prk---pG~tR---~DLl~~N~~I~k~i~~----~i~~~a~p~~ivlVvsNPv  161 (375)
T 7mdh_A          106 ---F-EDVDWALLIGAKPRG---PGMER---AALLDINGQIFADQGK----ALNAVASKNVKVLVVGNPC  161 (375)
T ss_dssp             ---T-TTCSEEEECCCCCCC---TTCCH---HHHHHHHHHHHHHHHH----HHHHHSCTTCEEEECSSSH
T ss_pred             ---h-CCCCEEEEcCCCCCC---CCCCH---HHHHHHHHHHHHHHHH----HHHHhcCCCeEEEEecCch
Confidence               2 579999999997421   12333   3455566654444443    3444  3467888888753

>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}

Probab=95.78  E-value=0.087  Score=46.63  Aligned_cols=42  Identities=21%  Similarity=0.192  Sum_probs=36.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE   43 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~   43 (259)
                      |++.|.|+ |-+|..+|..|++.|++|++.+++++.++...+.
T Consensus         6 ~kVgVIGa-G~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~   47 (483)
T 3mog_A            6 QTVAVIGS-GTMGAGIAEVAASHGHQVLLYDISAEALTRAIDG   47 (483)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHH
Confidence            35777777 9999999999999999999999999988776543

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=95.68  E-value=0.041  Score=45.23  Aligned_cols=85  Identities=13%  Similarity=0.098  Sum_probs=53.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHH-------HHhcCCcEEEEEecCCCHHHHHHHH---HH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE-------WKNKGFKVTGSVCDLSSREQREKLI---ET   70 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~D~~~~~~~~~~~---~~   70 (259)
                      +++.|.| .|.+|..+++.|.+.|++|++++|+.++.+.+.+.       ..+.-....++..-+.+...++.++   ++
T Consensus         6 m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~v~~~~~~~~~~~~~~~   84 (299)
T 1vpd_A            6 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENG   84 (299)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred             ceEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHhCcch
Confidence            4788999 59999999999999999999999998877654431       0000002233444444555666666   44


Q ss_pred             HHHHcCCCccEEEEcCC
Q 024994           71 VTSIFQGKLNILINNAA   87 (259)
Q Consensus        71 ~~~~~~~~id~vi~~ag   87 (259)
                      +.+.. .+=.++|+...
T Consensus        85 l~~~l-~~~~~vv~~s~  100 (299)
T 1vpd_A           85 IIEGA-KPGTVLIDMSS  100 (299)
T ss_dssp             HHHHC-CTTCEEEECSC
T ss_pred             HhhcC-CCCCEEEECCC
Confidence            54444 22235555544

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=95.67  E-value=0.033  Score=49.05  Aligned_cols=74  Identities=16%  Similarity=0.178  Sum_probs=59.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+++|.|| |.||..+|+.| +++++|.++.++.++.+.+.+++.    +..++..|-+|.+-+++.=      . ...|
T Consensus       236 ~~v~I~Gg-G~ig~~lA~~L-~~~~~v~iIE~d~~r~~~la~~l~----~~~Vi~GD~td~~~L~ee~------i-~~~D  302 (461)
T 4g65_A          236 RRIMIVGG-GNIGASLAKRL-EQTYSVKLIERNLQRAEKLSEELE----NTIVFCGDAADQELLTEEN------I-DQVD  302 (461)
T ss_dssp             CEEEEECC-SHHHHHHHHHH-TTTSEEEEEESCHHHHHHHHHHCT----TSEEEESCTTCHHHHHHTT------G-GGCS
T ss_pred             cEEEEEcc-hHHHHHHHHHh-hhcCceEEEecCHHHHHHHHHHCC----CceEEeccccchhhHhhcC------c-hhhc
Confidence            57888887 88999999997 567899999999999988877763    5778899999987655431      1 3688


Q ss_pred             EEEEcCC
Q 024994           81 ILINNAA   87 (259)
Q Consensus        81 ~vi~~ag   87 (259)
                      ++|...+
T Consensus       303 ~~ia~T~  309 (461)
T 4g65_A          303 VFIALTN  309 (461)
T ss_dssp             EEEECCS
T ss_pred             EEEEccc
Confidence            8888777

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=95.67  E-value=0.052  Score=44.32  Aligned_cols=162  Identities=13%  Similarity=0.139  Sum_probs=90.9

Q ss_pred             EEEEEcCcchHHHHHHHHHHHC-CCEEE-EeeCChhHH--HHH----------------HHHHHhcCCcEEEEEecCCCH
Q 024994            2 TALVTGGTRGIGHATVEELARF-GAIVH-TCSRNQIEL--DAR----------------LHEWKNKGFKVTGSVCDLSSR   61 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~-G~~V~-~~~r~~~~~--~~~----------------~~~~~~~~~~~~~~~~D~~~~   61 (259)
                      +++|+|++|.+|+.+++.+.+. |+.++ +++++.+..  ...                .+++..   .+ =+..|++.+
T Consensus         7 kV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~---~~-DvVIDft~p   82 (273)
T 1dih_A            7 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKD---DF-DVFIDFTRP   82 (273)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTT---SC-SEEEECSCH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhc---CC-CEEEEcCCh
Confidence            6899999999999999998854 67766 556654321  000                001101   11 234689999


Q ss_pred             HHHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHH----------h----hHhHHHHHHHHHHHhHhC
Q 024994           62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSST----------N----FESVFHLSQLAHPLFKAS  127 (259)
Q Consensus        62 ~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~----------n----~~~~~~~~~~~~~~~~~~  127 (259)
                      +.....++.+.+   .++++|+-..|.         +.++.++..+.          |    +.-.+.+++.+.++|.. 
T Consensus        83 ~~~~~~~~~a~~---~G~~vVigTtG~---------~~e~~~~L~~~a~~~~vv~a~N~siGvn~~~~l~~~aa~~~~~-  149 (273)
T 1dih_A           83 EGTLNHLAFCRQ---HGKGMVIGTTGF---------DEAGKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVMGD-  149 (273)
T ss_dssp             HHHHHHHHHHHH---TTCEEEECCCCC---------CHHHHHHHHHHTTTSCEEECSCCCHHHHHHHHHHHHHHHHHTT-
T ss_pred             HHHHHHHHHHHh---CCCCEEEECCCC---------CHHHHHHHHHhcCCCCEEEEecCcHHHHHHHHHHHHHHHhcCC-
Confidence            988888777766   357788877763         33333332221          1    11123344444444431 


Q ss_pred             CCCEEEEecCCCccCCCCCChhhhhhHHHHHHHHHHHHHHHc---------------cCCceEEEEeCCcee
Q 024994          128 GNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA---------------KDNIRTNTVAPWVIK  184 (259)
Q Consensus       128 ~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~---------------~~gi~v~~v~pg~v~  184 (259)
                       ...|=.+=.   .+...-..+|+.++...+.+.+.+...+.               +.+|.|.+++-|.+-
T Consensus       150 -~~dieiiE~---Hh~~K~DaPSGTA~~~ae~i~~~~~~~~~~~~~~~r~~~~~~r~~~~i~i~s~R~g~vv  217 (273)
T 1dih_A          150 -YTDIEIIEA---HHRHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDIV  217 (273)
T ss_dssp             -TSEEEEEEE---ECTTCCSSSCHHHHHHHHHHHHHTTCCGGGTEECCCCSCCCSCCTTCEEEEEEECTTCC
T ss_pred             -CCCEEEEEe---ecCCCCCCCCHHHHHHHHHHHHhhCCCccccccccccCccCCCCCCcceEEEEeCCCCC
Confidence             112211111   12223346789998888888766554321               346889999866553

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	259
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	6e-82
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	2e-78
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	9e-75
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	2e-73
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	5e-73
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	6e-70
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	2e-67
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	5e-67
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	3e-66
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	4e-66
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	8e-66
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	2e-64
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	2e-64
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	2e-64
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	4e-64
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	6e-64
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	6e-64
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	7e-63
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	8e-63
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	1e-62
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	3e-62
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	1e-60
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	1e-60
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	1e-60
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	4e-60
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	5e-60
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	2e-59
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	6e-59
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-58
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	2e-58
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	4e-58
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	4e-58
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	5e-58
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	8e-58
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-57
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	2e-57
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	2e-57
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	3e-56
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	3e-56
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	4e-56
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	3e-55
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	4e-55
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	4e-53
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	4e-53
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	1e-52
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	2e-52
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	1e-51
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	2e-51
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	3e-48
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	5e-47
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	6e-46
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	9e-45
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	1e-43
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	2e-43
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	3e-41
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	7e-40
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	8e-39
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-36
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	6e-34
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	1e-33
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	1e-33
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	1e-30
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	1e-29
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	3e-27
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	1e-21
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	9e-18
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	5e-16
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	5e-13
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	6e-07
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	1e-06
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	4e-05
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	7e-05
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	2e-04
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	3e-04
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	0.001
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	0.002
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	0.002
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	0.002
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	0.003
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	0.003
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	0.003
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	0.004
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	0.004

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score =  244 bits (624), Expect = 6e-82
 Identities = 141/245 (57%), Positives = 178/245 (72%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           TALVTGG+RGIG+  VEELA  GA V+TCSRNQ EL+  L +W++KGFKV  SVCDLSSR
Sbjct: 10  TALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSR 69

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
            +R++L+ TV + F GKLNIL+NNA I   K   D T ED S + S NFE+ +HLS LAH
Sbjct: 70  SERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAH 129

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P  KAS  G++VFISSV G   +P  ++YGA KGAM+QLT+ LA EWAKDNIR N V P 
Sbjct: 130 PFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPG 189

Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
           VI TS+++   + PE  E L+ +  +  + R GEP E++++VAFLC PAASY+TGQII V
Sbjct: 190 VIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYVTGQIIYV 249

Query: 242 DGGVT 246
           DGG+ 
Sbjct: 250 DGGLM 254

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  235 bits (601), Expect = 2e-78
 Identities = 152/246 (61%), Positives = 183/246 (74%), Gaps = 4/246 (1%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           T LVTGGT+GIGHA VEE A FGA++HTC+RN+ EL+  L +W+ KGF+VTGSVCD S R
Sbjct: 10  TVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLR 69

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
            +REKL++TV+S+F GKL+ILINN      KPT+D TAED S   STN ES +HLSQLAH
Sbjct: 70  PEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAH 129

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           PL KASG G+I+F+SS+ GV      S+Y A KGA+NQL +NLACEWA D IR N VAP 
Sbjct: 130 PLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPA 189

Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
           VI T +     E     EF   +  + P+GR GEP+EVSSLVAFLC+PAASYITGQ ICV
Sbjct: 190 VIATPLA----EAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYITGQTICV 245

Query: 242 DGGVTV 247
           DGG+TV
Sbjct: 246 DGGLTV 251

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score =  225 bits (576), Expect = 9e-75
 Identities = 81/248 (32%), Positives = 117/248 (47%), Gaps = 8/248 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             LVTGG RGIG A  +  AR GA+V  C     E            F+      DL   
Sbjct: 7   GVLVTGGARGIGRAIAQAFAREGALVALCDLRP-EGKEVAEAIGGAFFQ-----VDLEDE 60

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
            +R + +E       G++++L+NNAAIA     + +   +   V   N  +  HLS LA 
Sbjct: 61  RERVRFVEEAAYAL-GRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAA 119

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
              +  G G+IV ++SV G+      + Y A KG +  LT++LA + A   IR N VAP 
Sbjct: 120 REMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPG 179

Query: 182 VIKTSMI-KPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
            I T  + +     P+             + R G+P+EV+  V FL    AS+ITG I+ 
Sbjct: 180 AIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFITGAILP 239

Query: 241 VDGGVTVT 248
           VDGG+T +
Sbjct: 240 VDGGMTAS 247

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score =  222 bits (567), Expect = 2e-73
 Identities = 144/248 (58%), Positives = 185/248 (74%), Gaps = 1/248 (0%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           TALVTGG++GIG+A VEELA  GA V+TCSRN+ ELD  L  W+ KG  V GSVCDL SR
Sbjct: 8   TALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSR 67

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
            +R+KL++TV  +F GKLNIL+NNA +   K   D T +D + +  TNFE+ +HLSQ+A+
Sbjct: 68  TERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAY 127

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           PL KAS NG+++F+SS+ G   +PSVSLY A KGA+NQ+TK+LACEWAKDNIR N+VAP 
Sbjct: 128 PLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPG 187

Query: 182 VIKTSMIK-PFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
           VI T +++   ++ P   E +D    +TP+GRAG+P EVS+L+AFLC PAASYITGQII 
Sbjct: 188 VILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASYITGQIIW 247

Query: 241 VDGGVTVT 248
            DGG T  
Sbjct: 248 ADGGFTAN 255

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score =  221 bits (564), Expect = 5e-73
 Identities = 71/245 (28%), Positives = 109/245 (44%), Gaps = 6/245 (2%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            A++TGG  GIG A  E  A  GA +                 +N G +V    CD+S  
Sbjct: 7   LAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA--AIRNLGRRVLTVKCDVSQP 64

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
              E   + V S F G+ +IL+NNA I  + P  ++T E        N +S F +++   
Sbjct: 65  GDVEAFGKQVISTF-GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFV 123

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P  K +G G I+ ++S      I + + Y + K A    T+ LA +  KD I  N +AP 
Sbjct: 124 PGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPS 183

Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
           +++T+  +                    I R   P +++   AFL    AS+ITGQ + V
Sbjct: 184 LVRTATTEASALSAMFDVL---PNMLQAIPRLQVPLDLTGAAAFLASDDASFITGQTLAV 240

Query: 242 DGGVT 246
           DGG+ 
Sbjct: 241 DGGMV 245

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  214 bits (545), Expect = 6e-70
 Identities = 70/258 (27%), Positives = 117/258 (45%), Gaps = 13/258 (5%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF---KVTGSVCDL 58
            A++TG + GIG AT    AR GA V    R+   L+    +    G     V   V D+
Sbjct: 7   VAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADV 66

Query: 59  SSREQREKLIETVTSIFQGKLNILINNAAIA----FVKPTVDITAEDMSTVSSTNFESVF 114
           ++   +++++ T    F GKL+IL+NNA  A      K     + E      + N  SV 
Sbjct: 67  TTDAGQDEILSTTLGKF-GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVI 125

Query: 115 HLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIR 174
            L++ A P   ++    +   S   G+   P    Y   K A++Q T+N A +  +  IR
Sbjct: 126 ALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIR 185

Query: 175 TNTVAPWVIKTSMIK----PFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLC-LP 229
            N+++P ++ T        P E   +    +  +    P G  G+P +++ ++AFL    
Sbjct: 186 VNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFLADRK 245

Query: 230 AASYITGQIICVDGGVTV 247
            +SYI G  + VDGG ++
Sbjct: 246 TSSYIIGHQLVVDGGSSL 263

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  207 bits (527), Expect = 2e-67
 Identities = 76/246 (30%), Positives = 116/246 (47%), Gaps = 13/246 (5%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            ALVTG  +GIG  TV+ L   GA V   +R   +L +   E       +     DL   
Sbjct: 7   RALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG----IEPVCVDLGDW 62

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           +  EK +  +     G +++L+NNAA+  ++P +++T E      S N  SVF +SQ+  
Sbjct: 63  DATEKALGGI-----GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVA 117

Query: 122 PLF-KASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
                    GSIV +SS+      P++  Y + KGAM  LTK +A E     IR N+V P
Sbjct: 118 RDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNP 177

Query: 181 WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
            V+ T M K     PE   F   +  + P+ +  E ++V + + FL    ++  +G  I 
Sbjct: 178 TVVLTDMGKKVSADPE---FARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTSGGGIL 234

Query: 241 VDGGVT 246
           VD G  
Sbjct: 235 VDAGYL 240

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  206 bits (524), Expect = 5e-67
 Identities = 76/245 (31%), Positives = 122/245 (49%), Gaps = 6/245 (2%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            ALVTG  RGIG    + LA+  + V   SR Q   D+ + E K+ G++ +G   D+S +
Sbjct: 12  VALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKK 71

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           E+  ++I  +       ++IL+NNA I      + +  ++   V  TN  S+F+++Q   
Sbjct: 72  EEISEVINKIL-TEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPIS 130

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
                +  G I+ ISS+ G+ G    + Y + K  +   TK+LA E A  NI  N +AP 
Sbjct: 131 KRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPG 190

Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
            I + M     E     +    I    P GR G P+EV++L  FL    + YI G++  +
Sbjct: 191 FISSDMTDKISE-----QIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGYINGRVFVI 245

Query: 242 DGGVT 246
           DGG++
Sbjct: 246 DGGLS 250

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  204 bits (521), Expect = 3e-66
 Identities = 70/258 (27%), Positives = 120/258 (46%), Gaps = 13/258 (5%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF---KVTGSVCDL 58
           T ++TG + GIG  T    A+ GA V    R+   L+         G    +V   V D+
Sbjct: 7   TVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADV 66

Query: 59  SSREQREKLIETVTSIFQGKLNILINNAAI----AFVKPTVDITAEDMSTVSSTNFESVF 114
           ++ + ++++I +    F GK+++L+NNA      AF     D   +        N ++V 
Sbjct: 67  TTEDGQDQIINSTLKQF-GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVI 125

Query: 115 HLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIR 174
            +++   P   AS    +   S V G +  P    Y   K A++Q T++ A + AK  IR
Sbjct: 126 EMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIR 185

Query: 175 TNTVAPWVIKTSMIK----PFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPA 230
            N+V+P +++T        P +   +   F+       PIG AG+P+ +++++ FL    
Sbjct: 186 VNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFLADRN 245

Query: 231 AS-YITGQIICVDGGVTV 247
            S YI GQ I  DGG ++
Sbjct: 246 LSFYILGQSIVADGGTSL 263

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  204 bits (519), Expect = 4e-66
 Identities = 72/247 (29%), Positives = 104/247 (42%), Gaps = 7/247 (2%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            ALVTGG  G+G   V+ L   GA V     N+        E   +   V     D+SS 
Sbjct: 8   VALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFV---RHDVSSE 64

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
                ++  V     G LN+L+NNA I           ED S +   N ESVF   Q   
Sbjct: 65  ADWTLVMAAVQRRL-GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGI 123

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKD--NIRTNTVA 179
              K +G GSI+ ++SV     I   + Y A K A++ LT+  A    K    IR N++ 
Sbjct: 124 AAMKETG-GSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIH 182

Query: 180 PWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
           P  I T M++         E +    +    GRA  P+ ++ LV FL    +S ++G  +
Sbjct: 183 PDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVMSGSEL 242

Query: 240 CVDGGVT 246
             D  + 
Sbjct: 243 HADNSIL 249

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score =  203 bits (517), Expect = 8e-66
 Identities = 70/255 (27%), Positives = 113/255 (44%), Gaps = 15/255 (5%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEW-KNKGFKVTGSVCDLSS 60
           T +VTGG RGIG A    +A  GA V    R+  +      +  K  G K     CD+S+
Sbjct: 11  TIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSN 70

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
            +   K I+ + +   G ++ LI NA ++ VKP  ++T ED + V   N   VF+  +  
Sbjct: 71  TDIVTKTIQQIDADL-GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAV 129

Query: 121 HPLFKASGNGSIVFISS--------VGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDN 172
             L+        + ++S           + G  +   Y + K A + L K LA EWA   
Sbjct: 130 AKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAG 189

Query: 173 IRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAAS 232
           IR N ++P  + T      ++     +  D  A   P+ R  +P+E++     L    A+
Sbjct: 190 IRVNALSPGYVNTDQTAHMDK-----KIRDHQASNIPLNRFAQPEEMTGQAILLLSDHAT 244

Query: 233 YITGQIICVDGGVTV 247
           Y+TG    +DGG  +
Sbjct: 245 YMTGGEYFIDGGQLI 259

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  199 bits (507), Expect = 2e-64
 Identities = 76/246 (30%), Positives = 119/246 (48%), Gaps = 13/246 (5%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             LVTG  +GIG  TV+ L   GA V   SR Q +LD+ + E       +     DL   
Sbjct: 9   RVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG----IEPVCVDLGDW 64

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           E  E+ + +V     G +++L+NNAA+A ++P +++T E        N  +V  +SQ+  
Sbjct: 65  EATERALGSV-----GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVA 119

Query: 122 PLFKASGNG-SIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
               A G   +IV +SS    R + + S+Y + KGA++ LTK +A E     IR N V P
Sbjct: 120 RGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNP 179

Query: 181 WVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC 240
            V+ TSM +     P        +  + P+G+  E + V + + FL    +   TG  + 
Sbjct: 180 TVVMTSMGQATWSDPH---KAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGSTLP 236

Query: 241 VDGGVT 246
           V+GG  
Sbjct: 237 VEGGFW 242

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  200 bits (509), Expect = 2e-64
 Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 11/261 (4%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF---KVTGSVCDL 58
           + ++TG + GIG +     A+ GA V    RN+  L+    +    G    K+   V D+
Sbjct: 6   SVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADV 65

Query: 59  SSREQREKLIETVTSIFQGKLNILINNAAIAFVKPT--VDITAEDMSTVSSTNFESVFHL 116
           +    ++ +I T  + F GK++IL+NNA       T   D   E        NF++V  +
Sbjct: 66  TEASGQDDIINTTLAKF-GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEM 124

Query: 117 SQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTN 176
           +Q        +    +   S V G +       Y   K A++Q T+  A +  +  +R N
Sbjct: 125 TQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVN 184

Query: 177 TVAPWVIKTSMIK----PFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLC-LPAA 231
           +V+P  + T  +     P     +   F+       P+G  G+P+E+++++ FL     +
Sbjct: 185 SVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLADRNLS 244

Query: 232 SYITGQIICVDGGVTVTVNVN 252
           SYI GQ I  DGG T+ + + 
Sbjct: 245 SYIIGQSIVADGGSTLVMGMQ 265

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score =  199 bits (507), Expect = 2e-64
 Identities = 72/248 (29%), Positives = 116/248 (46%), Gaps = 9/248 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            A++TGGT GIG A   +    GA V    R+    +           ++     D S  
Sbjct: 8   VAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD-QIQFFQHDSSDE 66

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           +   KL +     F G ++ L+NNA IA  K   + T  +   + + N + VF  ++L  
Sbjct: 67  DGWTKLFDATEKAF-GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGI 125

Query: 122 PLFKASGNGSI-VFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA--KDNIRTNTV 178
              K  G G+  + +SS+ G  G PS+  Y A KGA+  ++K+ A + A    ++R NTV
Sbjct: 126 QRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTV 185

Query: 179 APWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI 238
            P  IKT ++        G+E       +TP+G  GEP++++ +  +L    + + TG  
Sbjct: 186 HPGYIKTPLVDDLP----GAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFATGSE 241

Query: 239 ICVDGGVT 246
             VDGG T
Sbjct: 242 FVVDGGYT 249

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  200 bits (509), Expect = 4e-64
 Identities = 90/251 (35%), Positives = 127/251 (50%), Gaps = 8/251 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK-----NKGFKVTGSVC 56
            A+VTGG  GIG A V+EL   G+ V   SR    L +   E +      K  +V    C
Sbjct: 14  VAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQC 73

Query: 57  DLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHL 116
           ++ + E+   L+++    F GK+N L+NN    F+ P   I+++    V  TN    F++
Sbjct: 74  NIRNEEEVNNLVKSTLDTF-GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYM 132

Query: 117 SQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTN 176
            +  +  +     GSIV I  V    G P     GA +  +  LTK+LA EWA   IR N
Sbjct: 133 CKAVYSSWMKEHGGSIVNII-VPTKAGFPLAVHSGAARAGVYNLTKSLALEWACSGIRIN 191

Query: 177 TVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG 236
            VAP VI +        G  G  F +G  ++ P  R G P+EVSS+V FL  PAAS+ITG
Sbjct: 192 CVAPGVIYSQTAVE-NYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAASFITG 250

Query: 237 QIICVDGGVTV 247
           Q + VDGG ++
Sbjct: 251 QSVDVDGGRSL 261

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score =  198 bits (504), Expect = 6e-64
 Identities = 88/247 (35%), Positives = 128/247 (51%), Gaps = 6/247 (2%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSS 60
            ALVTGG+RG+G    + LA  G  V   SRN  E      +   K G +     CD+S+
Sbjct: 7   VALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSN 66

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
            E+ +KL+E V   F GKL+ ++N A I    P  +   ++   V   N    +++ + A
Sbjct: 67  YEEVKKLLEAVKEKF-GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREA 125

Query: 121 HPLFKASGNGSIVFISSVGGVRG-IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
             L + S N SI+ I S+      +P++S Y A KG +  LTK LA EW +  IR N +A
Sbjct: 126 FSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIA 185

Query: 180 PWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
           P   +T M +     PE    LD + ++ P+GR G P+++  +  FL    A Y+TGQII
Sbjct: 186 PGWYRTKMTEAVFSDPE---KLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKYVTGQII 242

Query: 240 CVDGGVT 246
            VDGG T
Sbjct: 243 FVDGGWT 249

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  198 bits (504), Expect = 6e-64
 Identities = 64/248 (25%), Positives = 112/248 (45%), Gaps = 9/248 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             +VTGG RGIG   V      GA V  C +++    +     + +       +CD++  
Sbjct: 8   VVVVTGGGRGIGAGIVRAFVNSGARVVICDKDE----SGGRALEQELPGAVFILCDVTQE 63

Query: 62  EQREKLIETVTSIFQGKLNILINNAA-IAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
           +  + L+      F  +L+ ++NNA      +   + +A+    +   N    + L++LA
Sbjct: 64  DDVKTLVSETIRRFG-RLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLA 122

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
            P  + S  G+++ ISS+ G  G      Y A KGA+  +TK LA + +   +R N ++P
Sbjct: 123 LPYLRKSQ-GNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISP 181

Query: 181 WVIKTSMIKPF-EEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
             I T + +      P+    +       P+GR G+P EV +   FL    A++ TG  +
Sbjct: 182 GNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE-ANFCTGIEL 240

Query: 240 CVDGGVTV 247
            V GG  +
Sbjct: 241 LVTGGAEL 248

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  195 bits (498), Expect = 7e-63
 Identities = 61/251 (24%), Positives = 107/251 (42%), Gaps = 14/251 (5%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF--KVTGSVCDLS 59
            ALVTG + GIG A    L + G  V  C+R    ++    E K+ G+   +    CDLS
Sbjct: 12  LALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLS 71

Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
           + E    +   + S     ++I INNA +A     +  +      + + N  ++   ++ 
Sbjct: 72  NEEDILSMFSAIRSQH-SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTRE 130

Query: 120 AHPLFKASG--NGSIVFISSVGGVRGIPS--VSLYGAYKGAMNQLTKNLACEW--AKDNI 173
           A+   K     +G I+ I+S+ G R +P      Y A K A+  LT+ L  E   A+ +I
Sbjct: 131 AYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQTHI 190

Query: 174 RTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASY 233
           R   ++P V++T       +     +  +  A      +  +P++V+  V ++    A  
Sbjct: 191 RATCISPGVVETQFAFKLHD-----KDPEKAAATYEQMKCLKPEDVAEAVIYVLSTPAHI 245

Query: 234 ITGQIICVDGG 244
             G I     G
Sbjct: 246 QIGDIQMRPTG 256

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  195 bits (496), Expect = 8e-63
 Identities = 71/246 (28%), Positives = 108/246 (43%), Gaps = 12/246 (4%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             L+TG   GIG AT+E  A+ GA +  C   +  L                 V D++  
Sbjct: 7   AVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPV-----VMDVADP 61

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
              E+      +   G+L+ +++ A I        +  ED   V   N    F +++ A 
Sbjct: 62  ASVERGFAEALAHL-GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAAS 120

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
              +    GSIV  +S   + G    + Y A    +  LT+ LA E  +  IR NT+AP 
Sbjct: 121 EAMREKNPGSIVLTASRVYL-GNLGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPG 179

Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
            I+T M     E     +  +     TP+GRAG+P EV+    FL    +S+ITGQ++ V
Sbjct: 180 FIETRMTAKVPE-----KVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFITGQVLFV 234

Query: 242 DGGVTV 247
           DGG T+
Sbjct: 235 DGGRTI 240

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score =  195 bits (496), Expect = 1e-62
 Identities = 78/247 (31%), Positives = 108/247 (43%), Gaps = 10/247 (4%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           T ++TGG RG+G     +    GA V        E  A   E    G        D++  
Sbjct: 7   TVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLDVTIE 63

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           E  ++++      F G ++ L+NNA I+        + E    V   N   VF   +   
Sbjct: 64  EDWQRVVAYAREEF-GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVI 122

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P  K +G GSIV ISS  G+ G+   S YGA K  +  L+K  A E   D IR N+V P 
Sbjct: 123 PAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPG 182

Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAG-EPDEVSSLVAFLCLPAASYITGQIIC 240
           +  T M         G    +G    TP+GR G EP E++  V  L    +SY+TG  + 
Sbjct: 183 MTYTPMTA-----ETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAELA 237

Query: 241 VDGGVTV 247
           VDGG T 
Sbjct: 238 VDGGWTT 244

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score =  194 bits (493), Expect = 3e-62
 Identities = 81/253 (32%), Positives = 116/253 (45%), Gaps = 9/253 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            ALVTG T GIG      L + G  V  C+R +  L   L E +  G +  G  CD+ S 
Sbjct: 4   VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSV 63

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
            + E L+  V   + G +++L+NNA       T ++  E    V  TN   VF +++   
Sbjct: 64  PEIEALVAAVVERY-GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVL 122

Query: 122 PLF--KASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
                   G G IV I+S GG +G+   + Y A K  +   TK L  E A+  I  N V 
Sbjct: 123 KAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVC 182

Query: 180 PWVIKTSMIKPFEE------GPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASY 233
           P  ++T M     E           E  D I  + PIGR  +P EV+ +VA+L  P A+ 
Sbjct: 183 PGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAAA 242

Query: 234 ITGQIICVDGGVT 246
           +T Q + V GG+ 
Sbjct: 243 VTAQALNVCGGLG 255

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score =  190 bits (484), Expect = 1e-60
 Identities = 61/250 (24%), Positives = 106/250 (42%), Gaps = 5/250 (2%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            A++TGG  GIG  T +   R+GA V              +   +    ++   CD++  
Sbjct: 8   VAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD-VISFVHCDVTKD 66

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPT--VDITAEDMSTVSSTNFESVFHLSQL 119
           E    L++T  +   GKL+I+  N  +    P   ++   ED   V   N    F +++ 
Sbjct: 67  EDVRNLVDTTIAKH-GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKH 125

Query: 120 AHPLFKASGNGSIVFISSVGGVR-GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
           A  +   +  GSIVF +S+     G     +Y A K A+  LT +L  E  +  IR N V
Sbjct: 126 AARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCV 185

Query: 179 APWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI 238
           +P+++ + ++                      G     ++V+  VA+L    + Y++G  
Sbjct: 186 SPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKYVSGLN 245

Query: 239 ICVDGGVTVT 248
           + +DGG T T
Sbjct: 246 LVIDGGYTRT 255

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score =  189 bits (482), Expect = 1e-60
 Identities = 60/257 (23%), Positives = 99/257 (38%), Gaps = 11/257 (4%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           TA+VT      G  +   L+  G  V     +  + D        + F  T       S 
Sbjct: 2   TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDEL------EAFAETYPQLKPMSE 55

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
           ++  +LIE VTS + G++++L++N   A   +P      ED            F L    
Sbjct: 56  QEPAELIEAVTSAY-GQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAV 114

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
               K   +G I+FI+S         +S Y + +     L   L+ E  + NI    + P
Sbjct: 115 ASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGP 174

Query: 181 WVIKTSMIK---PFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ 237
             + +       P E      E +  + + T + R G   E+  LVAFL   +  Y+TGQ
Sbjct: 175 NYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYLTGQ 234

Query: 238 IICVDGGVTVTVNVNGL 254
           +  + GG  +     G+
Sbjct: 235 VFWLAGGFPMIERWPGM 251

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  189 bits (481), Expect = 1e-60
 Identities = 58/248 (23%), Positives = 111/248 (44%), Gaps = 12/248 (4%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             ++T   +GIG A     AR GA V     N+ +L         K   +   V D++ +
Sbjct: 8   VIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQE-----LEKYPGIQTRVLDVTKK 62

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           +Q ++    V  +      +L N A        +D   +D     + N  S++ + +   
Sbjct: 63  KQIDQFANEVERLD-----VLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFL 117

Query: 122 PLFKASGNGSIVFISSV-GGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
           P   A  +G+I+ +SSV   V+G+ +  +Y   K A+  LTK++A ++ +  IR N V P
Sbjct: 118 PKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCP 177

Query: 181 WVIKTSMIKP-FEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
             + T  ++   +      E  +   ++   GR    +E++ L  +L    ++Y+TG  +
Sbjct: 178 GTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVTGNPV 237

Query: 240 CVDGGVTV 247
            +DGG ++
Sbjct: 238 IIDGGWSL 245

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  189 bits (480), Expect = 4e-60
 Identities = 66/254 (25%), Positives = 108/254 (42%), Gaps = 11/254 (4%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE-LDARLHEWKNKGFKVTGSVCDLSS 60
            ALVTG  RGIG     EL R G  V     N  E  +  +   K  G        ++  
Sbjct: 20  VALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGV 79

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
            E   ++ E    IF GKL+I+ +N+ +       D+T E+   V + N    F +++ A
Sbjct: 80  VEDIVRMFEEAVKIF-GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREA 138

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
           +   +  G   ++   + G  + +P  ++Y   KGA+    + +A + A   I  N VAP
Sbjct: 139 YKHLEIGGRLILMGSIT-GQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAP 197

Query: 181 WVIKTSMIKPF--------EEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAAS 232
             IKT M            E             + +P+ R G P +++ +V FL      
Sbjct: 198 GGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLASNDGG 257

Query: 233 YITGQIICVDGGVT 246
           ++TG++I +DGG  
Sbjct: 258 WVTGKVIGIDGGAC 271

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score =  188 bits (478), Expect = 5e-60
 Identities = 79/249 (31%), Positives = 122/249 (48%), Gaps = 6/249 (2%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            A++TG   GIG       A  GA V     N    +  + E +  G +     CD++S 
Sbjct: 13  CAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSE 72

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           ++   L +   S   GK++IL+NNA     KP  D+   D       N  S FHLSQL  
Sbjct: 73  QELSALADFAISKL-GKVDILVNNAGGGGPKP-FDMPMADFRRAYELNVFSFFHLSQLVA 130

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P  + +G G I+ I+S+       +++ Y + K A + L +N+A +  + NIR N +AP 
Sbjct: 131 PEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPG 190

Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
            I T  +K         E    + + TPI R G+P ++++   FLC PAAS+++GQI+ V
Sbjct: 191 AILTDALKSVITP----EIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQILTV 246

Query: 242 DGGVTVTVN 250
            GG    +N
Sbjct: 247 SGGGVQELN 255

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score =  187 bits (475), Expect = 2e-59
 Identities = 70/255 (27%), Positives = 114/255 (44%), Gaps = 13/255 (5%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             LVTG    IG AT   LA  G  +     N+  L+      + KG +    VCD++S 
Sbjct: 7   VCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSE 66

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
           E     +++V   F GK++ L NNA       P  D  ++D + V + N    FH+ +  
Sbjct: 67  EAVIGTVDSVVRDF-GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAV 125

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
                    G IV  +S+ GV+G P+++ YG  KGA+  LT+  A + A  NIR N ++P
Sbjct: 126 SRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISP 185

Query: 181 WVIKTSMIKPFEE-----------GPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLP 229
             +    +   +              +       +    P+ R G+ +E+  +VAFL   
Sbjct: 186 GYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAFLLGD 245

Query: 230 AASYITGQIICVDGG 244
            +S++TG  + + GG
Sbjct: 246 DSSFMTGVNLPIAGG 260

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score =  186 bits (473), Expect = 6e-59
 Identities = 67/257 (26%), Positives = 99/257 (38%), Gaps = 17/257 (6%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             L+TGG  G+G A V+     GA V    ++   L        + G  V G V D+ S 
Sbjct: 7   AVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELE---TDHGDNVLGIVGDVRSL 63

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDI-----TAEDMSTVSSTNFESVFHL 116
           E +++      + F GK++ LI NA I      +              V   N +   H 
Sbjct: 64  EDQKQAASRCVARF-GKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHA 122

Query: 117 SQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTN 176
            +   P   AS  G+++F  S  G        LY A K A+  L + LA E A   +R N
Sbjct: 123 VKACLPALVASR-GNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELA-PYVRVN 180

Query: 177 TVAPWVIKTSMIKPF-----EEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPA- 230
            V    I + +  P       +        D +    PIGR  E +E +    F      
Sbjct: 181 GVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAYVFFATRGD 240

Query: 231 ASYITGQIICVDGGVTV 247
           A+  TG ++  DGG+ V
Sbjct: 241 AAPATGALLNYDGGLGV 257

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score =  184 bits (468), Expect = 1e-58
 Identities = 74/247 (29%), Positives = 111/247 (44%), Gaps = 8/247 (3%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVH-TCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            +VTG +RGIG A    L + G  V    +R+    +    + +  G +      D+S  
Sbjct: 4   VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKE 63

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
              E +++T      G +++++NNA I      + +       V   N   VF  +Q A 
Sbjct: 64  ADVEAMMKTAID-AWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAAT 122

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
            +      G I+ I+SV G+ G    + Y A K  +   +K  A E A  NI  N V P 
Sbjct: 123 KIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPG 182

Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCL-PAASYITGQIIC 240
            I + M     E     +    I    P+GR G+P+ V+ LV FL L PAASYITGQ   
Sbjct: 183 FIASDMTAKLGE-----DMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAFT 237

Query: 241 VDGGVTV 247
           +DGG+ +
Sbjct: 238 IDGGIAI 244

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score =  184 bits (467), Expect = 2e-58
 Identities = 70/248 (28%), Positives = 117/248 (47%), Gaps = 6/248 (2%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE-LDARLHEWKNKGFKVTGSVCDLSS 60
             ++TG + G+G +     A   A V    R++ +  ++ L E K  G +      D++ 
Sbjct: 9   VVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTV 68

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
                 L+++    F GKL+++INNA +     + +++  D + V  TN    F  S+ A
Sbjct: 69  ESDVINLVQSAIKEF-GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREA 127

Query: 121 HPLFKA-SGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
              F      G+++ +SSV      P    Y A KG M  +T+ LA E+A   IR N + 
Sbjct: 128 IKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIG 187

Query: 180 PWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
           P  I T +       PE       +    P+G  GEP+E++++ A+L    ASY+TG  +
Sbjct: 188 PGAINTPINAEKFADPE---QRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTGITL 244

Query: 240 CVDGGVTV 247
             DGG+T+
Sbjct: 245 FADGGMTL 252

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score =  184 bits (469), Expect = 4e-58
 Identities = 68/250 (27%), Positives = 110/250 (44%), Gaps = 5/250 (2%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSS 60
            A +TGG  G+G      L+  GA     SR    L A   +  ++ G KV    CD+  
Sbjct: 27  VAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRD 86

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
            +  +  +  +  +  G  NI+INNAA  F+ PT  ++     T++         ++   
Sbjct: 87  PDMVQNTVSELIKVA-GHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEI 145

Query: 121 HPLF-KASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
                KA    + + I+++    G   V    + K  +  ++K+LA EW K  +R N + 
Sbjct: 146 GKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQ 205

Query: 180 PWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 239
           P  IKT       +      F   +  + P GR G  +E+++L AFLC   AS+I G +I
Sbjct: 206 PGPIKTKGAFSRLDPTG--TFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWINGAVI 263

Query: 240 CVDGGVTVTV 249
             DGG  V +
Sbjct: 264 KFDGGEEVLI 273

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  183 bits (466), Expect = 4e-58
 Identities = 64/252 (25%), Positives = 106/252 (42%), Gaps = 11/252 (4%)

Query: 2   TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
            AL TG  RGIG     EL R GA +V     +    +  + E K  G +      D+S 
Sbjct: 8   VALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISK 67

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
             +   L +   S F G L+ +++N+ +      +++T E    V + N    F ++Q  
Sbjct: 68  PSEVVALFDKAVSHF-GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQG 126

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
               +  G   I+  S    + GIP+ +LY   K A+    +  A +     +  N +AP
Sbjct: 127 LKHCRRGGRI-ILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAP 185

Query: 181 WVIKTSMIKPFEE--------GPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAAS 232
             +KT M              G    +  +G+A   P+ R G P ++   V+ LC   + 
Sbjct: 186 GGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSALCQEESE 245

Query: 233 YITGQIICVDGG 244
           +I GQ+I + GG
Sbjct: 246 WINGQVIKLTGG 257

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  183 bits (465), Expect = 5e-58
 Identities = 56/256 (21%), Positives = 96/256 (37%), Gaps = 21/256 (8%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLS 59
            ALVTG  +GIG A  E L   GA V     N             +    K     CD++
Sbjct: 5   VALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVA 64

Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
            ++Q       V   F G+L+IL+NNA +           ++       N  SV   + L
Sbjct: 65  DQQQLRDTFRKVVDHF-GRLDILVNNAGV--------NNEKNWEKTLQINLVSVISGTYL 115

Query: 120 AHPLFKASGN---GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKN--LACEWAKDNIR 174
                        G I+ +SS+ G+  +    +Y A K  +   T++  LA       +R
Sbjct: 116 GLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSGVR 175

Query: 175 TNTVAPWVIKTSMIKPF---EEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAA 231
            N + P  + T++++     E   +  E+ D I          +P  +++ +  L    A
Sbjct: 176 LNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIEDDA 235

Query: 232 SYITGQIICVDGGVTV 247
             + G I+ +     +
Sbjct: 236 --LNGAIMKITTSKGI 249

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score =  183 bits (464), Expect = 8e-58
 Identities = 78/251 (31%), Positives = 120/251 (47%), Gaps = 7/251 (2%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF--KVTGSVCDLS 59
             L+TGG  G+G AT   LA  GA +     +   L+A            +V  +V D+S
Sbjct: 6   VVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVS 65

Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQ 118
              Q E  +   T  F G+++   NNA I     PT   TA +   V S N   VF   +
Sbjct: 66  DEAQVEAYVTATTERF-GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLE 124

Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
               + +  G+G +V  +SVGG+RGI + S Y A K  +  LT+N A E+ +  IR N +
Sbjct: 125 KVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAI 184

Query: 179 APWVIKTSMIKPFEEGPEGS---EFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT 235
           AP  I T M++   +  +     +  +   +  P  R GE  E++++VAFL    ASY+ 
Sbjct: 185 APGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDASYVN 244

Query: 236 GQIICVDGGVT 246
             ++ +DGG +
Sbjct: 245 ATVVPIDGGQS 255

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score =  181 bits (461), Expect = 2e-57
 Identities = 77/246 (31%), Positives = 115/246 (46%), Gaps = 9/246 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            ALVTG +RGIG A  E LA  GA V   + ++    A        G  +   + +++  
Sbjct: 6   IALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGL---MLNVTDP 62

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
              E  +        G+++IL+NNA I      + +  E+ + +  TN  SVF LS+   
Sbjct: 63  ASIES-VLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVM 121

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
                  +G I+ I SV G  G    + Y A K  +   +K+LA E A   I  N VAP 
Sbjct: 122 RAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPG 181

Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
            I+T M +   +         GI  Q P GR G   E+++ VAFL    A+YITG+ + V
Sbjct: 182 FIETDMTRALSDDQR-----AGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETLHV 236

Query: 242 DGGVTV 247
           +GG+ +
Sbjct: 237 NGGMYM 242

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  181 bits (460), Expect = 2e-57
 Identities = 79/245 (32%), Positives = 112/245 (45%), Gaps = 14/245 (5%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            ALV+GG RG+G + V  +   GA V        E  A   E  +    V     D++  
Sbjct: 8   VALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYV---HLDVTQP 64

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
            Q +  ++T  + F G L++L+NNA I  +    D    +   +   N   VF   +   
Sbjct: 65  AQWKAAVDTAVTAF-GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVV 123

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
              K +G GSI+ ISS+ G+ G  +   Y A K A+  LTK+ A E     IR N++ P 
Sbjct: 124 KPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPG 183

Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
           ++KT M     E             QT +GRA EP EVS+LV +L    +SY TG    V
Sbjct: 184 LVKTPMTDWVPED----------IFQTALGRAAEPVEVSNLVVYLASDESSYSTGAEFVV 233

Query: 242 DGGVT 246
           DGG  
Sbjct: 234 DGGTV 238

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  183 bits (465), Expect = 2e-57
 Identities = 61/254 (24%), Positives = 98/254 (38%), Gaps = 29/254 (11%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIV---------HTCSRNQIELDARLHEWKNKGFKVT 52
             LVTG   G+G A     A  GA+V             +     D  + E + +G K  
Sbjct: 9   VVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAV 68

Query: 53  GSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFES 112
            +   +   E  EKL++T    F G++++++NNA I   +    I+ ED   +   +   
Sbjct: 69  ANYDSV---EAGEKLVKTALDTF-GRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRG 124

Query: 113 VFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDN 172
            F +++ A    K    G I+  +S  G+ G    + Y A K  +  L   L  E  K+N
Sbjct: 125 SFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGRKNN 184

Query: 173 IRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAAS 232
           I  NT+AP            E                +  A +P+ V+ LV +LC  +  
Sbjct: 185 IHCNTIAPNAGSRMTETVMPE---------------DLVEALKPEYVAPLVLWLCHESC- 228

Query: 233 YITGQIICVDGGVT 246
              G +  V  G  
Sbjct: 229 EENGGLFEVGAGWI 242

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score =  178 bits (452), Expect = 3e-56
 Identities = 68/246 (27%), Positives = 108/246 (43%), Gaps = 12/246 (4%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           T LVTG   GIG A ++  AR GA +    R +  L   +   + +   V   V D+S  
Sbjct: 7   TILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAV---VADVSDP 63

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           +  E +       F G+L+ + + A +A    + ++  E    V   N    F +++   
Sbjct: 64  KAVEAVFAEALEEF-GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVAR--K 120

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
                   GS+V   SV G+        Y A K  +  L + LA E A+  +R N + P 
Sbjct: 121 AGEVLEEGGSLVLTGSVAGLGAFGLAH-YAAGKLGVVGLARTLALELARKGVRVNVLLPG 179

Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
           +I+T M              +     +P+GRAG P+EV+    FL    ++YITGQ + V
Sbjct: 180 LIQTPMTAGLPP-----WAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQALYV 234

Query: 242 DGGVTV 247
           DGG ++
Sbjct: 235 DGGRSI 240

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score =  178 bits (453), Expect = 3e-56
 Identities = 69/254 (27%), Positives = 106/254 (41%), Gaps = 10/254 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEW--KNKGFKVTGSVCDLS 59
            A+VTG T GIG      LA  GA +            ++        G KV     DLS
Sbjct: 6   VAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLS 65

Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
             E    L++       G+++IL+NNA I       D   E    + + N  +VFH +  
Sbjct: 66  KGEAVRGLVDNAVRQM-GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAA 124

Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
           A P  K  G G I+ I+S  G+    + S Y A K  +   TK  A E A   I  N + 
Sbjct: 125 ALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAIC 184

Query: 180 PWVIKTSMIKPFEEG-------PEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAAS 232
           P  ++T +++             + +   + ++ + P  +   P+++     FL   AA+
Sbjct: 185 PGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLASDAAA 244

Query: 233 YITGQIICVDGGVT 246
            ITG  + VDGG T
Sbjct: 245 QITGTTVSVDGGWT 258

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score =  177 bits (451), Expect = 4e-56
 Identities = 75/245 (30%), Positives = 115/245 (46%), Gaps = 20/245 (8%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             LV   +RGIG A  + L++ GA V  C+RN+  L    H +          VCDL  R
Sbjct: 6   GVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRY---------VVCDL--R 54

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           +  + L E V      +++IL+ NA         ++T ED      + F ++  + +   
Sbjct: 55  KDLDLLFEKV-----KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYL 109

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
           P  K  G G IV I+S   +  I ++    + + A+    K L+ E A   I  N VAP 
Sbjct: 110 PAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPG 169

Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
             +T  +K              +  Q P+ R  +P+E++S+VAFLC   ASY+TGQ I V
Sbjct: 170 WTETERVKELLSEE----KKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQTIVV 225

Query: 242 DGGVT 246
           DGG++
Sbjct: 226 DGGLS 230

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  175 bits (445), Expect = 3e-55
 Identities = 71/245 (28%), Positives = 114/245 (46%), Gaps = 17/245 (6%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           + LVTGG RGIG A  + LA  G  V    R                  + G   D++  
Sbjct: 9   SVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG-----------LFGVEVDVTDS 57

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           +  ++    V       + +L++NA ++     + +T E    V + N    F ++Q A 
Sbjct: 58  DAVDRAFTAVEEHQG-PVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRAS 116

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
              + +  G ++FI SV G+ GI + + Y A K  +  + +++A E +K N+  N VAP 
Sbjct: 117 RSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPG 176

Query: 182 VIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 241
            I T M +  +E  +      G  +  P  R G P EV+ +V+FL    ASYI+G +I V
Sbjct: 177 YIDTDMTRALDERIQ-----QGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPV 231

Query: 242 DGGVT 246
           DGG+ 
Sbjct: 232 DGGMG 236

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score =  175 bits (445), Expect = 4e-55
 Identities = 72/253 (28%), Positives = 110/253 (43%), Gaps = 8/253 (3%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            ALVTG  +GIG A    L + G  V     N     A   E    G        D+S R
Sbjct: 3   VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDR 62

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           +Q    +E       G  ++++NNA +A   P   IT E +  V + N + V    Q A 
Sbjct: 63  DQVFAAVEQARKTL-GGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAV 121

Query: 122 PL-FKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
               K    G I+   S  G  G P +++Y + K A+  LT+  A + A   I  N   P
Sbjct: 122 EAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCP 181

Query: 181 WVIKTSMIKPFEE------GPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYI 234
            ++KT M    +       G          A++  +GR  EP++V++ V++L  P + Y+
Sbjct: 182 GIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDYM 241

Query: 235 TGQIICVDGGVTV 247
           TGQ + +DGG+  
Sbjct: 242 TGQSLLIDGGMVF 254

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score =  170 bits (431), Expect = 4e-53
 Identities = 56/253 (22%), Positives = 91/253 (35%), Gaps = 26/253 (10%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           +ALVTGG  G+G A    L   G  V      +            +G  +     D++  
Sbjct: 3   SALVTGGASGLGRAAALALKARGYRVVVLDLRR------------EGEDLIYVEGDVTRE 50

Query: 62  EQREKLIETVTSIFQGK--LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
           E   + +            ++      A   +        E    V   N    F++ +L
Sbjct: 51  EDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRL 110

Query: 120 AHPLFKA------SGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNI 173
           A    +          G IV  +SV    G    + Y A KG +  LT   A E A   I
Sbjct: 111 AAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGWGI 170

Query: 174 RTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASY 233
           R  TVAP +  T +++   E  + S      A+     R G P+E ++LV  +       
Sbjct: 171 RVVTVAPGLFDTPLLQGLPEKAKASL----AAQVPFPPRLGRPEEYAALVLHIL--ENPM 224

Query: 234 ITGQIICVDGGVT 246
           + G+++ +DG + 
Sbjct: 225 LNGEVVRLDGALR 237

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score =  170 bits (432), Expect = 4e-53
 Identities = 70/254 (27%), Positives = 105/254 (41%), Gaps = 11/254 (4%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           TAL+TG  RGIG A  E   R GA V     N     A   E    G        D++ +
Sbjct: 7   TALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI---GPAACAIALDVTDQ 63

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
              ++ +  +   + G ++IL+NNAA+  + P V+IT E    + + N      + Q   
Sbjct: 64  ASIDRCVAELLDRW-GSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVA 122

Query: 122 PLFKASGNGSIVFI-SSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
               A G G  +   +S  G RG   V +Y A K A+  LT++      +  I  N +AP
Sbjct: 123 RAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAP 182

Query: 181 WVIKTSMIKPF------EEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYI 234
            V+               E     E    +    P GR G  ++++ +  FL  P A YI
Sbjct: 183 GVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLATPEADYI 242

Query: 235 TGQIICVDGGVTVT 248
             Q   VDGG  ++
Sbjct: 243 VAQTYNVDGGNWMS 256

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score =  169 bits (428), Expect = 1e-52
 Identities = 56/252 (22%), Positives = 97/252 (38%), Gaps = 24/252 (9%)

Query: 3   ALVTGGTRGIGHATVEELARFGA-------IVHTCSRNQIELDARLHEWKNKGFKVTGSV 55
            L+TG  +GIG A   E AR          ++   SR   +L+    E + +G       
Sbjct: 4   LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTIT 63

Query: 56  CDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFH 115
            D+S      +L   +   + G ++ L+NNA +       D+T ED     +TN +  F 
Sbjct: 64  ADISDMADVRRLTTHIVERY-GHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFF 122

Query: 116 LSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
           L+Q    L +   +G I FI+SV   +     S+Y   K     L + +     K N+R 
Sbjct: 123 LTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNVRI 182

Query: 176 NTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT 235
             V P  + T M    ++  +                   P+++++ V    L  +  + 
Sbjct: 183 TDVQPGAVYTPMWGKVDDEMQ--------------ALMMMPEDIAAPVVQAYLQPSRTVV 228

Query: 236 GQIIC--VDGGV 245
            +II     G +
Sbjct: 229 EEIILRPTSGDI 240

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  168 bits (427), Expect = 2e-52
 Identities = 57/253 (22%), Positives = 101/253 (39%), Gaps = 13/253 (5%)

Query: 2   TALVTGGT--RGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLS 59
            ALV G T  R +G A   +L   GA V    + +  L     +             D++
Sbjct: 10  KALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAE-RLRPEAEKLAEALGGALLFRADVT 68

Query: 60  SREQREKLIETVTSIFQGKLNILINNA----AIAFVKPTVDITAEDMSTVSSTNFESVFH 115
             E+ + L   V     G L+ L++        A     +D   +D       +  S+  
Sbjct: 69  QDEELDALFAGVKE-AFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVA 127

Query: 116 LSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
           +++ A PL +  G   IV ++     + +P  ++    K A+    + LA E     +R 
Sbjct: 128 VARRAEPLLREGGG--IVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYELGPKGVRV 185

Query: 176 NTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT 235
           N ++   ++T   +      +     D +A+  P+ R    +EV +L  FL  P AS IT
Sbjct: 186 NAISAGPVRTVAARSIPGFTK---MYDRVAQTAPLRRNITQEEVGNLGLFLLSPLASGIT 242

Query: 236 GQIICVDGGVTVT 248
           G+++ VD G  + 
Sbjct: 243 GEVVYVDAGYHIM 255

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score =  167 bits (423), Expect = 1e-51
 Identities = 43/254 (16%), Positives = 81/254 (31%), Gaps = 20/254 (7%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDA-RLHEWKNKGFKVTGSVCDLS- 59
             +      GIG  T  EL +                A    +  N    +T    D++ 
Sbjct: 7   NVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTV 66

Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
              + +KL++ +       ++ILIN A I        +    +    + NF  + + +  
Sbjct: 67  PVAESKKLLKKIFDQL-KTVDILINGAGI--------LDDHQIERTIAINFTGLVNTTTA 117

Query: 120 AHPLFKAS---GNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTN 176
               +        G I  I SV G   I  V +Y A K A+   T +LA       +   
Sbjct: 118 ILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAY 177

Query: 177 TVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG 236
           ++ P + +T ++  F    +    +     +  +    +  E             +   G
Sbjct: 178 SINPGITRTPLVHTFNSWLDVEPRV----AELLLSHPTQTSEQ--CGQNFVKAIEANKNG 231

Query: 237 QIICVDGGVTVTVN 250
            I  +D G    + 
Sbjct: 232 AIWKLDLGTLEAIE 245

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  165 bits (420), Expect = 2e-51
 Identities = 56/236 (23%), Positives = 90/236 (38%), Gaps = 19/236 (8%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             L+TG   GIG  T  E A+  + +     N+  L+    + K  G KV   V D S+R
Sbjct: 9   IVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNR 68

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           E      + V +   G ++IL+NNA + +           +      N  + F  ++   
Sbjct: 69  EDIYSSAKKVKAEI-GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFL 127

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAK---DNIRTNTV 178
           P    + +G IV ++S  G   +P +  Y + K A     K L  E A      ++T  +
Sbjct: 128 PAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCL 187

Query: 179 APWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYI 234
            P  + T  IK                  T +G   EP+EV + +    L     I
Sbjct: 188 CPNFVNTGFIK---------------NPSTSLGPTLEPEEVVNRLMHGILTEQKMI 228

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score =  158 bits (401), Expect = 3e-48
 Identities = 63/269 (23%), Positives = 104/269 (38%), Gaps = 31/269 (11%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVC----- 56
            A++TGG R IGH+    L + G  V    R+      RL    N     +  +C     
Sbjct: 3   AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLS 62

Query: 57  -DLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMST----------- 104
              S  +  E +I+     F G+ ++L+NNA+  +  P +     + +            
Sbjct: 63  LSSSLLDCCEDIIDCSFRAF-GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAE 121

Query: 105 -----VSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159
                  +  F       +        S N S+V +        +P   +Y   K A+  
Sbjct: 122 LFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGG 181

Query: 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRA-GEPDE 218
           LT+  A E A  +IR N VAP +       P        E  +   R+ P+G++     +
Sbjct: 182 LTRAAALELAPRHIRVNAVAPGLSLLPPAMP-------QETQEEYRRKVPLGQSEASAAQ 234

Query: 219 VSSLVAFLCLPAASYITGQIICVDGGVTV 247
           ++  +AFL    A YITG  + VDGG+ +
Sbjct: 235 IADAIAFLVSKDAGYITGTTLKVDGGLIL 263

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score =  155 bits (391), Expect = 5e-47
 Identities = 47/254 (18%), Positives = 104/254 (40%), Gaps = 14/254 (5%)

Query: 2   TALVTGGTR--GIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLS 59
             LVTG      I +   + + R GA +    +N  +L  R+ E+  +        CD++
Sbjct: 7   RILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLQCDVA 65

Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKP-----TVDITAEDMSTVSSTNFESVF 114
                + +   +  ++  K +  +++   A            +T E        +  S  
Sbjct: 66  EDASIDTMFAELGKVWP-KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFV 124

Query: 115 HLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIR 174
            +++    +       +++ +S +G  R IP+ ++ G  K ++    + +A     + +R
Sbjct: 125 AMAKACRSMLN--PGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVR 182

Query: 175 TNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYI 234
            N ++   I+T      ++  +    L      TPI R    ++V +  AFLC   ++ I
Sbjct: 183 VNAISAGPIRTLAASGIKDFRK---MLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGI 239

Query: 235 TGQIICVDGGVTVT 248
           +G+++ VDGG ++ 
Sbjct: 240 SGEVVHVDGGFSIA 253

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  152 bits (384), Expect = 6e-46
 Identities = 51/251 (20%), Positives = 97/251 (38%), Gaps = 16/251 (6%)

Query: 2   TALVTGGTRGIGHATVEELARF---GAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVC 56
             ++TG +RG G A   +LAR    G+++   +R++  L     E   +    KV  +  
Sbjct: 8   VCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAA 67

Query: 57  DLSSREQREKLI---ETVTSIFQGKLNILINNAAIAFV---KPTVDITAEDMSTVSSTNF 110
           DL +    ++L+     +      +  +LINNAA                +++   + N 
Sbjct: 68  DLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNL 127

Query: 111 ESVFHLSQLAHPLFKASGNGSIV--FISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEW 168
            S+  L+      F+ S   S     ISS+  ++      LY A K A + L + LA E 
Sbjct: 128 TSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQVLAAEE 187

Query: 169 AKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCL 228
              ++R  + AP  +   M +   E  +  E    + +    G   +    +  +  L  
Sbjct: 188 --PSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKLLGLL- 244

Query: 229 PAASYITGQII 239
              ++ +G  +
Sbjct: 245 QKDTFQSGAHV 255

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  150 bits (379), Expect = 9e-45
 Identities = 51/256 (19%), Positives = 90/256 (35%), Gaps = 24/256 (9%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSR------NQIELDARLHEWKNKGFKVTGSVC 56
            L+TG + GIG      LA   +              Q  L             +     
Sbjct: 5   VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQL 64

Query: 57  DLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHL 116
           D+   +      E VT       ++L+ NA +  + P   +  + +++V   N      +
Sbjct: 65  DVRDSKSVAAARERVTEGRV---DVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRM 121

Query: 117 SQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTN 176
            Q   P  K  G+G ++   SVGG+ G+P   +Y A K A+  L ++LA       +  +
Sbjct: 122 LQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLS 181

Query: 177 TVAPWVIKTSMIKPFEEGPE----------GSEFLDGIA--RQTPIGRAGEPDEVSSLVA 224
            +    + T+ ++     PE             F   +A  +Q     A  P+EV+ +  
Sbjct: 182 LIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEVFL 241

Query: 225 FLCL---PAASYITGQ 237
                  P   Y T +
Sbjct: 242 TALRAPKPTLRYFTTE 257

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  146 bits (368), Expect = 1e-43
 Identities = 59/265 (22%), Positives = 101/265 (38%), Gaps = 40/265 (15%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
            +++G   GIG AT + L   G  +        E+                 + DLS+ E
Sbjct: 4   IVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV-----------------IADLSTAE 46

Query: 63  QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAE--------------------DM 102
            R++ I  V +     ++ L+  A +      +                           
Sbjct: 47  GRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQ 106

Query: 103 STVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSL-YGAYKGAMNQLT 161
                 +  +  HL+   +PL  A   G      ++    G    +L Y   K A+    
Sbjct: 107 PAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAV 166

Query: 162 KNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSS 221
           +  A  W +  +R NT+AP   +T +++   + P   E +       P+GR  EP E++S
Sbjct: 167 RKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESI--AKFVPPMGRRAEPSEMAS 224

Query: 222 LVAFLCLPAASYITGQIICVDGGVT 246
           ++AFL  PAASY+ G  I +DGG+ 
Sbjct: 225 VIAFLMSPAASYVHGAQIVIDGGID 249

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  145 bits (366), Expect = 2e-43
 Identities = 54/249 (21%), Positives = 91/249 (36%), Gaps = 16/249 (6%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            A++TGG  G+G AT E L   GA            +A+  +  N        V      
Sbjct: 7   VAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDV 66

Query: 62  EQREKLIETVTSIF--QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
           +    L +              +   +    +K     T ED   V   N    F++ +L
Sbjct: 67  QTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRL 126

Query: 120 AHPLFKAS------GNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNI 173
                  +        G I+  +SV    G    + Y A KG +  +T  +A + A   I
Sbjct: 127 VAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGI 186

Query: 174 RTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPI-GRAGEPDEVSSLVAFLCLPAAS 232
           R  T+AP +  T ++    E     +  + +A Q P   R G+P E + LV  +      
Sbjct: 187 RVMTIAPGLFGTPLLTSLPE-----KVCNFLASQVPFPSRLGDPAEYAHLVQAII--ENP 239

Query: 233 YITGQIICV 241
           ++ G++I +
Sbjct: 240 FLNGEVIRL 248

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  140 bits (354), Expect = 3e-41
 Identities = 63/285 (22%), Positives = 96/285 (33%), Gaps = 71/285 (24%)

Query: 3   ALVTGGTRGIGHATVEELAR-FGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
           ALVTGG +GIG A V +L R F   V   +R+     A + + + +G        D+   
Sbjct: 6   ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDL 65

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
           +    L + +   + G L++L+NNA IAF                 TNF     +     
Sbjct: 66  QSIRALRDFLRKEY-GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELL 124

Query: 122 PLFKASGNGSIVFISSVGGVRGIPSV---------------------------------- 147
           PL K  G   +V +SS+  VR + S                                   
Sbjct: 125 PLIKPQG--RVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVH 182

Query: 148 -------SLYGAYKGAMNQLTKNLACEWAK----DNIRTNTVAPWVIKTSMIKPFEEGPE 196
                  S YG  K  +  L++  A + ++    D I  N   P  ++T M  P      
Sbjct: 183 QKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPK----- 237

Query: 197 GSEFLDGIARQTPIGRAGEPDEVSSLVAFLCL--PAASYITGQII 239
                              P+E +    +L L  P A    GQ +
Sbjct: 238 ---------------ATKSPEEGAETPVYLALLPPDAEGPHGQFV 267

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  137 bits (345), Expect = 7e-40
 Identities = 49/246 (19%), Positives = 84/246 (34%), Gaps = 11/246 (4%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSS 60
             +VTG ++GIG      LA+ GA V   +R++  L   +                 +  
Sbjct: 16  KVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMED 75

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
               E+ +     +  G L++LI N                +      NF S   L+  A
Sbjct: 76  MTFAEQFVAQAGKLM-GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAA 134

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKD--NIRTNTV 178
            P+ K S  GSIV +SS+ G    P V+ Y A K A++    ++  E++    N+     
Sbjct: 135 LPMLKQSN-GSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLC 193

Query: 179 APWVIKTSMIK------PFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAAS 232
              +I T             +     E    I +   + +     + S     L    + 
Sbjct: 194 VLGLIDTETAMKAVSGIVHMQAAPKEECALEIIKGGALRQEEVYYDSSLWTTLLIRNPSR 253

Query: 233 YITGQI 238
            I   +
Sbjct: 254 KILEFL 259

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  133 bits (335), Expect = 8e-39
 Identities = 41/254 (16%), Positives = 75/254 (29%), Gaps = 31/254 (12%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
             LV GG   +G   V+        V +    + E  +     K             S  
Sbjct: 4   RVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVK----------MTDSFT 53

Query: 62  EQREKLIETVTSIF-QGKLNILINNA-AIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
           EQ +++   V  +    K++ ++  A   A          ++   +   +  +    S L
Sbjct: 54  EQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHL 113

Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA--KDNIRTNT 177
           A    K    G +    +   + G P +  YG  KGA++QL ++LA + +          
Sbjct: 114 ATKHLK--EGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIA 171

Query: 178 VAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ 237
           V P  + T M +                           + +               +G 
Sbjct: 172 VLPVTLDTPMNRKSMPEA-------------DFSSWTPLEFLVETFHDWITGNKRPNSGS 218

Query: 238 IICV--DGGVTVTV 249
           +I V    G T   
Sbjct: 219 LIQVVTTDGKTELT 232

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score =  128 bits (322), Expect = 2e-36
 Identities = 62/286 (21%), Positives = 101/286 (35%), Gaps = 48/286 (16%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQ-------------------IELDARLHE 43
           ALVTG  + +G +  E L   G  V                          I + A L  
Sbjct: 5   ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN 64

Query: 44  WKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMS 103
                         ++   +  +L+    + + G+ ++L+NNA+  +  P +    +   
Sbjct: 65  VATAPVSGADGSAPVTLFTRCAELVAACYTHW-GRCDVLVNNASSFYPTPLLRNDEDGHE 123

Query: 104 T------VSSTNFESVFHLSQLAH--------------PLFKASGNGSIVFISSVGGVRG 143
                     T    +F  + +A               P      N SI+ +      + 
Sbjct: 124 PCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP 183

Query: 144 IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDG 203
           +   ++Y   KGA+  LT++ A E A   IR N V P +       P           +G
Sbjct: 184 LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMP-------PAVWEG 236

Query: 204 IARQTPI-GRAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVT 248
              + P+  R     EVS +V FLC   A YITG  + VDGG ++T
Sbjct: 237 HRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT 282

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  120 bits (302), Expect = 6e-34
 Identities = 36/254 (14%), Positives = 80/254 (31%), Gaps = 33/254 (12%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
            +V GG   +G A +E   + G  V     +  +                    + +  E
Sbjct: 5   VIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVD----------GNKNWTE 54

Query: 63  QREKLIETVTSIFQ-GKLNILINN-AAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
           Q + ++E   S  Q  +++ +       A    +     ++   +   +  S    ++  
Sbjct: 55  QEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAK-- 112

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAK--DNIRTNTV 178
                    G +    +   +   PS+  YG  K A++ LT +LA + +   DN    T+
Sbjct: 113 LATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTI 172

Query: 179 APWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLV-AFLCLPAASYITGQ 237
            P  + T                                 +S  +  +    ++   +G 
Sbjct: 173 MPVTLDT-------------PMNRKWMPNADHSSWTPLSFISEHLLKWTTETSSRPSSGA 219

Query: 238 IICV---DGGVTVT 248
           ++ +   +G  T+T
Sbjct: 220 LLKITTENGTSTIT 233

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score =  121 bits (303), Expect = 1e-33
 Identities = 45/251 (17%), Positives = 90/251 (35%), Gaps = 9/251 (3%)

Query: 2   TALVTG--GTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLS 59
             L+ G    + I +   +     GA +     N+  L+ R+     +         D+S
Sbjct: 7   KGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE-SLEKRVRPIAQELNSPYVYELDVS 65

Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
             E  + L  +V     G L+ ++++ A A  +       E   +  +T  E   +    
Sbjct: 66  KEEHFKSLYNSVKK-DLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIE 124

Query: 120 AHPLFKASGNGSIVFISSV--GGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
                K   N     ++    G  + +   ++ G  K A+    + LA +  K +IR N 
Sbjct: 125 LTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNA 184

Query: 178 VAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ 237
           ++   I+T       +       L       P+ +    +EV +   +L    +S ++G+
Sbjct: 185 LSAGPIRTLASSGIADFRM---ILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSSGVSGE 241

Query: 238 IICVDGGVTVT 248
           +  VD G  V 
Sbjct: 242 VHFVDAGYHVM 252

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  120 bits (301), Expect = 1e-33
 Identities = 45/235 (19%), Positives = 79/235 (33%), Gaps = 32/235 (13%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVH--TCSRNQIELDARLHEWKNKGFKVTGSVCDLS 59
           + +VTG  RGIG   V++L +   I H    +R+  +          K  +V      ++
Sbjct: 5   SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI---KDSRVHVLPLTVT 61

Query: 60  SREQREKLIETVTSIFQGK-LNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLS 117
             +  +  +  V  I     L++LINNA +        +     ++     N  SV  L+
Sbjct: 62  CDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLT 121

Query: 118 QLAHPLFKASGNGSIVFISSV------------------GGVRGIPSVSLYGAYKGAMNQ 159
           Q   PL K + +       SV                          V  Y   K A+N 
Sbjct: 122 QKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINM 181

Query: 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF-----EEGPEGSEFLDGIARQTP 209
             + LA +   DN+      P  ++T++         E+     E +    +   
Sbjct: 182 FGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKNAALTVEQSTA--ELISSFNKLDN 234

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score =  112 bits (280), Expect = 1e-30
 Identities = 43/263 (16%), Positives = 82/263 (31%), Gaps = 40/263 (15%)

Query: 2   TALVTGGTRGIGHATVEELARF---GAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDL 58
           + L+TG  RG+G   V+ L         + T  RN+ +    L +       +     DL
Sbjct: 4   SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE-LEDLAKNHSNIHILEIDL 62

Query: 59  SSREQREKLIETVTSI--FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHL 116
            + +  +KL+  +  +   QG   +  N            + ++++     TN      L
Sbjct: 63  RNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIML 122

Query: 117 SQLAHPLFKASGNGSIVF--------------ISSVGGVRGIPSVSLYGAYKGAMNQLTK 162
           ++   PL K +   +                 I           +  Y   K A+N  TK
Sbjct: 123 AKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATK 182

Query: 163 NLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSL 222
           +L+ +     I   ++ P  +KT M                     P+       ++   
Sbjct: 183 SLSVDLYPQRIMCVSLHPGWVKTDMGGSS----------------APLDVPTSTGQIVQT 226

Query: 223 VAFLCLPAASYITGQIICVDGGV 245
           ++ L         G  +  DG  
Sbjct: 227 ISKL----GEKQNGGFVNYDGTP 245

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score =  110 bits (274), Expect = 1e-29
 Identities = 46/256 (17%), Positives = 81/256 (31%), Gaps = 12/256 (4%)

Query: 2   TALVTG--GTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLS 59
             LV+G      I           GA +     +++ L  R+ +       +        
Sbjct: 8   RILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNE 67

Query: 60  SREQREKLIETVTSIFQGKLNILINNAAIA--FVKPTVDITAEDMSTVSSTNFESVFHLS 117
                     T       KL+ ++++                   + VS     S +  +
Sbjct: 68  EHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYA 127

Query: 118 QLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
            +A  L      G  +        R +P+ +     K A+  + + +A E  K  +R+N 
Sbjct: 128 SMAKALLPIMNPGGSIVGMDFDPSRAMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNL 187

Query: 178 VAPWVIKTSMIK-------PFEEGPEGSEFLDGIARQTPIGR-AGEPDEVSSLVAFLCLP 229
           VA   I+T  +          E G +     +G  ++ PIG    +   V+  V  L   
Sbjct: 188 VAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCALLSD 247

Query: 230 AASYITGQIICVDGGV 245
                TG II  DGG 
Sbjct: 248 WLPATTGDIIYADGGA 263

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score =  104 bits (259), Expect = 3e-27
 Identities = 60/283 (21%), Positives = 100/283 (35%), Gaps = 40/283 (14%)

Query: 2   TALVTG--GTRGIGHATVEELARFGAIVHTCSRNQ------------------------- 34
            A + G     G G A  + LA  GA +   +                            
Sbjct: 10  RAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSL 69

Query: 35  ------IELDARLHEWKNKGFKVTGSVC-DLSSREQREKLIETVTSIFQGKLNILINNAA 87
                   LDA     ++    V  +     SS    ++  E V   F G ++IL+++ A
Sbjct: 70  MEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDF-GSIDILVHSLA 128

Query: 88  IAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSV 147
                    +       +++ +  S   +S L+H L   +  G+ + ++ +   R IP  
Sbjct: 129 NGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERIIPGY 188

Query: 148 S-LYGAYKGAMNQLTKNLACEWAKDN-IRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIA 205
                + K A+   T+ LA E  +   IR NT++   + +   K           ++   
Sbjct: 189 GGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDT---MIEYSY 245

Query: 206 RQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVT 248
              PI +    DEV +  AFL  P AS ITG  I VD G+   
Sbjct: 246 NNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSM 288

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 90.0 bits (221), Expect = 1e-21
 Identities = 44/322 (13%), Positives = 94/322 (29%), Gaps = 79/322 (24%)

Query: 3   ALVTG--GTRGIGHATVEELARFGAIVHTCSRNQI-----------ELDARLHEWKNKGF 49
             + G   T G G    +EL++    +       +           + D  +   K+K  
Sbjct: 5   CFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKM 64

Query: 50  KVTGSV---------------------CDLSSREQREKLIETVTSIFQGKLNILINNAAI 88
            +   +                      ++      E +   +   + GK+N+L+++ A 
Sbjct: 65  NILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKY-GKINMLVHSLAN 123

Query: 89  AFV--KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPS 146
           A    K  ++ + +      S +  S+  L +          +  I              
Sbjct: 124 AKEVQKDLLNTSRKGYLDALSKSSYSLISLCK-YFVNIMKPQSSIISLTYHASQKVVPGY 182

Query: 147 VSLYGAYKGAMNQLTKNLACEWAK-DNIRTNTVAPWVIKTSMIK---------------- 189
                + K A+   T+ LA    +  NIR NT++   +K+                    
Sbjct: 183 GGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTNQN 242

Query: 190 ------------------------PFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAF 225
                                     +        ++   +  P+ +     ++ S+ +F
Sbjct: 243 KNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASF 302

Query: 226 LCLPAASYITGQIICVDGGVTV 247
           L    +  ITGQ I VD G+ +
Sbjct: 303 LLSRESRAITGQTIYVDNGLNI 324

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 77.4 bits (189), Expect = 9e-18
 Identities = 23/215 (10%), Positives = 61/215 (28%), Gaps = 8/215 (3%)

Query: 1   MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
           M   + GGT  +G      LA  G  +   SR + + +A+  E++      + +      
Sbjct: 1   MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNED 60

Query: 61  REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
             +   +           ++   +   I   K  V              + S    +++ 
Sbjct: 61  AAEACDIAVLTIPWEHA-IDTARDLKNILREKIVVSPLVPVSRGAKGFTYSSERSAAEIV 119

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
             + ++    S +          +     +       +  +K +      +      +  
Sbjct: 120 AEVLESEKVVSALHTIPAARFANLDEKFDWDVPVCGDDDESKKVVMSLISEIDGLRPLDA 179

Query: 181 WVIKTS-MIKPFEEGPEGSEFLDGIARQTPIGRAG 214
             +  S +++        +  +  I R   +G  G
Sbjct: 180 GPLSNSRLVESL------TPLILNIMRFNGMGELG 208

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 72.2 bits (176), Expect = 5e-16
 Identities = 27/173 (15%), Positives = 51/173 (29%), Gaps = 15/173 (8%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
            A+V  GT  +G  +   LA  GA V  C R   +  A       +   V  +  + +  
Sbjct: 25  KAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFK-VNVTAAETADD 83

Query: 62  EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTN-FESVFHLSQLA 120
             R + ++          + +    AI        +        SS            L 
Sbjct: 84  ASRAEAVKGA--------HFVFTAGAIGL----ELLPQAAWQNESSIEIVADYNAQPPLG 131

Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNI 173
                A+  G         G  GI  +     ++  + +L ++    +  + I
Sbjct: 132 IGGIDATDKGKEYGGKRAFGALGIGGLK-LKLHRACIAKLFESSEGVFDAEEI 183

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 64.6 bits (156), Expect = 5e-13
 Identities = 45/191 (23%), Positives = 72/191 (37%), Gaps = 14/191 (7%)

Query: 2   TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDA---RLHEWKNKGFKVTGSVCD 57
           T LVTGGT G+G      LAR GA  +   SR+  + D     + E +  G + T + CD
Sbjct: 11  TVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACD 70

Query: 58  LSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLS 117
           ++ RE   +L+  +        + + + AA         +T E +   S        +L 
Sbjct: 71  VTDRESVRELLGGIGDDVPL--SAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLH 128

Query: 118 QLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
           +L   L       + V  SS     G P +  Y      ++     LA +   D +    
Sbjct: 129 ELTREL----DLTAFVLFSSFASAFGAPGLGGYAPGNAYLD----GLAQQRRSDGLPATA 180

Query: 178 VAPWVIKTSMI 188
           VA      S +
Sbjct: 181 VAWGTWAGSGM 191

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 47.5 bits (112), Expect = 6e-07
 Identities = 32/180 (17%), Positives = 51/180 (28%), Gaps = 27/180 (15%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTCSR-----NQIELDARLHEWKNKGFKVTGSVC 56
            AL+TG T   G    E L   G  VH   R     N   +D    +      K      
Sbjct: 3   VALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYG 62

Query: 57  DLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHL 116
           DLS      +++       + + + + N  A++ V  + +            +      L
Sbjct: 63  DLSDTSNLTRILR------EVQPDEVYNLGAMSHVAVSFESPEYTA----DVDAMGTLRL 112

Query: 117 SQLAHPLFKASGNGSIVFISSV---GGVRGIP--------SVSLYGAYKGAMNQLTKNLA 165
            +                 S+    G V+ IP          S Y   K     +T N  
Sbjct: 113 LEAIR-FLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYR 171

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 46.3 bits (109), Expect = 1e-06
 Identities = 43/288 (14%), Positives = 82/288 (28%), Gaps = 59/288 (20%)

Query: 1   MTALVTGGTRGIGHATVEELARFGAIVHTCSRN---QIELDARLHEWKNKGFKVTGSVCD 57
           M  L+TGG   IG A V  + +                 L++     ++  +       D
Sbjct: 1   MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFE--HAD 58

Query: 58  LSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLS 117
           +    +  ++ E      Q + + +++ AA + V  ++   A  +     TN    + L 
Sbjct: 59  ICDSAEITRIFE------QYQPDAVMHLAAESHVDRSITGPAAFI----ETNIVGTYALL 108

Query: 118 QLAH-----PLFKASGNGSIVFISSV---GGVRGIPSV------------------SLYG 151
           ++A             N     IS+    G +     V                  S Y 
Sbjct: 109 EVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYS 168

Query: 152 AYKGAMNQLTKNLACEWAKDNIRT---NTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQT 208
           A K + + L +     +    I T   N   P+     +I            +       
Sbjct: 169 ASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLI---------PLVILNALEGK 219

Query: 209 PIGRAGEPDE------VSSLVAFLCLPAASYITGQIICVDGGVTVTVN 250
           P+   G+ D+      V      L +       G+   + G       
Sbjct: 220 PLPIYGKGDQIRDWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNL 267

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 41.9 bits (97), Expect = 4e-05
 Identities = 19/107 (17%), Positives = 37/107 (34%), Gaps = 11/107 (10%)

Query: 1   MTALVTGGTRGIGHATVEELARFGAIVHTC---SRNQIELDARLHEWKNKGFKVTGSVCD 57
           M  LVTGG+  IG  T  +L + G  V        ++  +   +     K         D
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFV--EGD 58

Query: 58  LSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMST 104
           + +     +++          ++ +I+ A +  V  +V    E    
Sbjct: 59  IRNEALMTEILH------DHAIDTVIHFAGLKAVGESVQKPLEYYDN 99

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.1 bits (95), Expect = 7e-05
 Identities = 36/180 (20%), Positives = 52/180 (28%), Gaps = 28/180 (15%)

Query: 3   ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARL--HEWKNKGFKVTGSV----C 56
           AL+TG T   G    E L   G  VH   R     +     H +KN    + G++     
Sbjct: 4   ALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYG 63

Query: 57  DLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHL 116
           DL+      K+I            I    A        V I+ +     +  +      L
Sbjct: 64  DLTDSTCLVKIINE-----VKPTEIYNLGAQSH-----VKISFDLAEYTADVDGVGTLRL 113

Query: 117 SQLAHPLFKASGNGSIVFISS---VGGVRGIPS--------VSLYGAYKGAMNQLTKNLA 165
                       +      S+    G V+ IP          S YGA K     +  N  
Sbjct: 114 LDAVK-TCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFR 172

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 39.8 bits (91), Expect = 2e-04
 Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 2/62 (3%)

Query: 2  TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELD--ARLHEWKNKGFKVTGSVCDLS 59
            LVTG    +    VE+L   G  V   +R+  +L    +  + K  G   T  V D+ 
Sbjct: 13 LVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDML 72

Query: 60 SR 61
           +
Sbjct: 73 KQ 74

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 39.4 bits (90), Expect = 3e-04
 Identities = 13/61 (21%), Positives = 19/61 (31%), Gaps = 2/61 (3%)

Query: 2  TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK-NKGFK-VTGSVCDLS 59
             VTG T   G      L   GA V   S     + +     +   G +   G + D +
Sbjct: 10 RVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQN 69

Query: 60 S 60
           
Sbjct: 70 K 70

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 37.0 bits (84), Expect = 0.001
 Identities = 37/207 (17%), Positives = 57/207 (27%), Gaps = 20/207 (9%)

Query: 2   TALVTGGTRGIGHATVEELARFGAIVHTC---SRNQIELDARLHEWKNKGFK-VTGSVCD 57
             LVTGG   IG  TV EL   G         S +  +  ARL              +CD
Sbjct: 3   IVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCD 62

Query: 58  LSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLS 117
               E+  K         + K++ +I+ A +  V  +  I               +  + 
Sbjct: 63  RKGLEKVFK---------EYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQ 113

Query: 118 QLAHPLF-------KASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAK 170
           Q     F                 +  +     +   + YG  K A+  +  +L     K
Sbjct: 114 QYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKK 173

Query: 171 DNIRTNTVAPWVIKTSMIKPFEEGPEG 197
                       I         E P G
Sbjct: 174 SWKFAILRYFNPIGAHPSGLIGEDPLG 200

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (85), Expect = 0.002
 Identities = 26/178 (14%), Positives = 47/178 (26%), Gaps = 39/178 (21%)

Query: 4   LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQ 63
           L+TGG   +G    ++L   G  V             +  W            +L + + 
Sbjct: 5   LITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGH------ENFELINHDV 58

Query: 64  REKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPL 123
            E L   V  I+        + A+ A     +    + +     TN     ++  LA   
Sbjct: 59  VEPLYIEVDQIY--------HLASPASPPNYMYNPIKTL----KTNTIGTLNMLGLAK-- 104

Query: 124 FKASGNGSIVFISS----------------VGGVRGIPSVSLYGAYKGAMNQLTKNLA 165
                   ++  S+                 G V  I   + Y   K     +     
Sbjct: 105 ---RVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYM 159

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 36.7 bits (83), Expect = 0.002
 Identities = 13/52 (25%), Positives = 20/52 (38%), Gaps = 4/52 (7%)

Query: 4  LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELD----ARLHEWKNKGFKV 51
          L+ GGT  IG   V      G   +   R ++  +      L  +K  G K+
Sbjct: 7  LIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKL 58

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 36.3 bits (82), Expect = 0.002
 Identities = 11/53 (20%), Positives = 15/53 (28%), Gaps = 5/53 (9%)

Query: 4  LVTGGTRGIGHATVEELARFGAIVHTCSRN-----QIELDARLHEWKNKGFKV 51
          L+ G T  IG    +     G       R        E    L  +K  G  +
Sbjct: 7  LLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANI 59

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 36.2 bits (82), Expect = 0.003
 Identities = 17/76 (22%), Positives = 23/76 (30%), Gaps = 10/76 (13%)

Query: 2  TALVTGGTRGIGHATVEELARFGAIVHTCSR--------NQIELDARLHEWKNKGFKVTG 53
           AL+TG T   G    E L   G  VH   R            +    H       K+  
Sbjct: 3  IALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKL-- 60

Query: 54 SVCDLSSREQREKLIE 69
             DL+      + I+
Sbjct: 61 HYADLTDASSLRRWID 76

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 36.1 bits (82), Expect = 0.003
 Identities = 14/62 (22%), Positives = 18/62 (29%), Gaps = 3/62 (4%)

Query: 2  TALVTGGTRGIGHATVEELARFGAIVHTCSRN--QIELDARLHEWKNKGFK-VTGSVCDL 58
          +ALVTG T   G    + L   G  VH                       +   G + D 
Sbjct: 2  SALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADA 61

Query: 59 SS 60
           S
Sbjct: 62 CS 63

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 35.6 bits (80), Expect = 0.003
 Identities = 7/37 (18%), Positives = 14/37 (37%)

Query: 1  MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIEL 37
          M  L+TG    +G    ++L      V       +++
Sbjct: 2  MKILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDI 38

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 35.7 bits (81), Expect = 0.004
 Identities = 14/67 (20%), Positives = 20/67 (29%), Gaps = 4/67 (5%)

Query: 1  MTALVTGGTRGIGHATVEELARFGAIVHTCSR---NQIELDARLHEWKNKGFK-VTGSVC 56
             +VTGG   IG   V  +      VH             A L        + V G + 
Sbjct: 3  KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIA 62

Query: 57 DLSSREQ 63
          D    ++
Sbjct: 63 DAELVDK 69

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (80), Expect = 0.004
 Identities = 7/30 (23%), Positives = 12/30 (40%)

Query: 4  LVTGGTRGIGHATVEELARFGAIVHTCSRN 33
           + G T   G  T+ +  + G  V    R+
Sbjct: 7  AIFGATGQTGLTTLAQAVQAGYEVTVLVRD 36

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	259
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	100.0
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	100.0
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	100.0
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	100.0
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	100.0
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	100.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	100.0
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	100.0
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	100.0
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.93
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.88
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.87
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.86
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.85
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.84
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.84
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.84
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.84
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.83
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.83
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.83
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.83
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.83
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.83
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.82
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.81
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.8
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.8
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.79
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.79
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.73
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.73
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.69
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.59
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.54
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.53
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.51
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.44
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.44
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.38
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	99.17
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.14
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.11
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	98.11
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.01
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.98
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.95
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.9
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.87
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.82
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.82
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.77
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.74
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.73
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.72
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	97.7
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.61
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.61
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.61
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.6
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.58
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.56
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	97.44
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.44
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.43
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.39
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.37
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.34
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.34
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	97.3
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.29
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.28
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	97.27
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.25
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.2
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	97.2
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.2
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	97.19
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.18
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	97.16
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	97.14
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.13
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	97.12
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.11
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.09
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	97.09
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	97.08
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.07
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.04
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.03
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.0
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.98
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.98
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.98
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	96.97
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.94
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.85
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	96.81
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.75
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.69
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.69
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.61
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	96.58
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	96.57
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.55
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	96.48
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	96.45
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	96.42
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.41
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.39
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	96.37
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	96.33
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	96.3
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	96.29
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.24
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.17
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	96.08
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	96.07
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	96.01
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	95.94
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	95.93
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	95.82
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	95.8
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	95.78
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	95.73
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	95.72
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	95.7
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	95.66
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	95.62
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	95.56
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	95.52
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	95.52
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	95.5
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	95.41
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	95.39
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	95.37
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	95.35
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	95.34
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	95.32
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	95.24
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	95.24
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	95.17
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	95.04
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	94.89
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	94.78
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	94.62
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	94.62
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	94.51
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	94.5
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	94.43
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.42
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	94.37
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	94.37
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	94.36
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	94.3
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	94.23
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	94.11
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	93.95
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	93.88
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	93.87
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	93.86
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	93.85
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	93.81
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	93.8
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.65
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	93.34
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	93.31
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	93.28
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	92.94
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	92.79
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	92.7
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	92.43
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	92.25
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	92.23
d2fr1a2	209	Erythromycin synthase, eryAI, 1st ketoreductase mo	92.23
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	92.08
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	92.01
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	91.96
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	91.88
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	91.86
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	91.76
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	91.69
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	91.62
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	91.57
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	91.42
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	91.32
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	91.29
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	91.05
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	91.05
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	90.88
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	90.88
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	90.71
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	90.68
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	90.65
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	90.63
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	90.62
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	90.5
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	90.22
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	90.18
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	90.04
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	90.01
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	90.0
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	89.94
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	89.89
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	89.57
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	89.49
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	89.47
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	89.43
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	89.28
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	89.17
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	88.81
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	88.77
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	88.56
d2b3ta1	274	N5-glutamine methyltransferase, HemK {Escherichia	88.46
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	88.41
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	88.33
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	88.21
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	87.99
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	87.91
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	87.9
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	87.8
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	87.8
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	87.8
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	87.51
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	87.16
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	87.09
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	86.98
d2o14a2	208	Hypothetical protein YxiM {Bacillus subtilis [TaxI	86.89
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	86.67
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	86.52
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	86.46
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	86.4
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	86.37
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	86.37
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	86.21
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	86.18
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	86.16
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	86.04
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	85.81
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	85.63
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	85.59
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	85.18
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	85.06
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	85.0
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	84.36
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	84.35
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	84.26
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	84.24
d1pn3a_	391	TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi	84.02
d1d4ca2	322	Flavocytochrome c3 (respiratory fumarate reductase	83.87
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	83.87
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	83.81
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	83.79
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	83.67
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	83.44
d1inla_	295	Spermidine synthase {Thermotoga maritima [TaxId: 2	83.43
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	83.39
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	83.34
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	83.33
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	83.28
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	83.2
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	83.0
d1c4oa2	174	Nucleotide excision repair enzyme UvrB {Thermus th	82.64
d1qo8a2	317	Flavocytochrome c3 (respiratory fumarate reductase	82.61
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	82.57
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	82.39
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	82.12
d1v71a1	318	Hypothetical protein C320.14 (SPCC320.14, SPCC330.	82.07
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	81.95
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	81.78
d1peya_	119	Sporulation response regulator Spo0F {Bacillus sub	81.35
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	81.27
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	81.06
d1qkia1	203	Glucose 6-phosphate dehydrogenase, N-terminal doma	81.0
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	80.92
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	80.63
d2h00a1	250	Methyltransferase 10 domain containing protein MET	80.56
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	80.33
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	80.22

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=1.1e-59  Score=387.58  Aligned_cols=251  Identities=56%  Similarity=0.876  Sum_probs=235.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||+++|++|+++|++|++++|+++++++..+++.+.+.++.++++|++|+++++++++++.+++++++|
T Consensus         9 K~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~id   88 (259)
T d2ae2a_           9 CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLN   88 (259)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCCce
Confidence            79999999999999999999999999999999999999999999888889999999999999999999999999855899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      ++|||||.....++.+.+.++|++++++|+.+++.+++.++|+|.+++.|+||++||..+..+.++...|++||+|+++|
T Consensus        89 ilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~l  168 (259)
T d2ae2a_          89 ILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQL  168 (259)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred             EEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccccccchHHHHHHHHHH
Confidence            99999999988899999999999999999999999999999999999899999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC  240 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~  240 (259)
                      +|+++.|++++|||||+|+||+++|++.+.....+......+.+....|++|+++|+|++++++||++++++|+|||.|.
T Consensus       169 t~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~itG~~i~  248 (259)
T d2ae2a_         169 TRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYVTGQIIY  248 (259)
T ss_dssp             HHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCCcCcEEE
Confidence            99999999999999999999999999986655544445566778889999999999999999999999999999999999


Q ss_pred             eCCCceeeecc
Q 024994          241 VDGGVTVTVNV  251 (259)
Q Consensus       241 ~dgG~~~~~~~  251 (259)
                      +|||.+.+.+|
T Consensus       249 VDGG~~a~~G~  259 (259)
T d2ae2a_         249 VDGGLMANCGF  259 (259)
T ss_dssp             ESTTGGGCSCC
T ss_pred             ECCCeEeeCCC
Confidence            99999876543

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=5.1e-59  Score=381.91  Aligned_cols=240  Identities=31%  Similarity=0.467  Sum_probs=225.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||+++|++|+++|++|++++|+++.+++..+++.+.+.++.++++|++|+++++++++++.+++ +++|
T Consensus        11 KvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~-g~iD   89 (251)
T d2c07a1          11 KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH-KNVD   89 (251)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC-SCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhc-CCce
Confidence            899999999999999999999999999999999999999999998888889999999999999999999999999 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.++|+++|+|.+++.|+||++||..+..+.++..+|++||+|+++|
T Consensus        90 ilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~l  169 (251)
T d2c07a1          90 ILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGF  169 (251)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHH
T ss_pred             eeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCCHHHHHHHHHHHHH
Confidence            99999999988899999999999999999999999999999999998899999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC  240 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~  240 (259)
                      +|+++.|++++|||||+|+||+++|++.....     +...+.+....|++|+++|+|++++++||++++++|+||+.|.
T Consensus       170 tr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~-----~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG~~i~  244 (251)
T d2c07a1         170 TKSLAKELASRNITVNAIAPGFISSDMTDKIS-----EQIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGYINGRVFV  244 (251)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBCC-----CC-----HHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHhhhhCeEEEEEccCCEecccccccC-----HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCCcCcEEE
Confidence            99999999999999999999999999986542     3467888889999999999999999999999999999999999


Q ss_pred             eCCCce
Q 024994          241 VDGGVT  246 (259)
Q Consensus       241 ~dgG~~  246 (259)
                      +|||.+
T Consensus       245 vDGG~s  250 (251)
T d2c07a1         245 IDGGLS  250 (251)
T ss_dssp             ESTTSC
T ss_pred             ECCCcC
Confidence            999975

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.6e-58  Score=379.70  Aligned_cols=243  Identities=32%  Similarity=0.483  Sum_probs=228.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||+++|++|+++|++|++++|+.++++++.+++++.+.++.++++|++|+++++++++++.+++ +++|
T Consensus        12 K~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~-g~iD   90 (255)
T d1fmca_          12 KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL-GKVD   90 (255)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-SSCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence            799999999999999999999999999999999999999999999888899999999999999999999999999 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||.....++ +.+.++|++++++|+.+++.++|.++|+|.+++.++||++||..+..+.++..+|++||+|+.+|
T Consensus        91 ilvnnAG~~~~~~~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~l  169 (255)
T d1fmca_          91 ILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHL  169 (255)
T ss_dssp             EEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHH
T ss_pred             EeeeCCcCCCCCcc-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccccccccchhHHHHHHHH
Confidence            99999998877665 78999999999999999999999999999999889999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC  240 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~  240 (259)
                      +|++|.|++++|||||+|+||+++|++......    +...+.+.+..|++|+++|+|++++++||++++++|+|||.|.
T Consensus       170 t~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~----~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~itG~~i~  245 (255)
T d1fmca_         170 VRNMAFDLGEKNIRVNGIAPGAILTDALKSVIT----PEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQILT  245 (255)
T ss_dssp             HHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCC----HHHHHHHHHTCSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHhCccCeEEEEeeeCcCcChHhhccCC----HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCCEEE
Confidence            999999999999999999999999998765432    3467778889999999999999999999999999999999999


Q ss_pred             eCCCceeee
Q 024994          241 VDGGVTVTV  249 (259)
Q Consensus       241 ~dgG~~~~~  249 (259)
                      +|||...++
T Consensus       246 vDGG~~~~l  254 (255)
T d1fmca_         246 VSGGGVQEL  254 (255)
T ss_dssp             ESTTSCCCC
T ss_pred             ECcCccccC
Confidence            999986544

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.7e-58  Score=378.70  Aligned_cols=243  Identities=35%  Similarity=0.544  Sum_probs=225.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKN-KGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+ .+.++.++++|++|+++++++++++.+++ +++
T Consensus         6 K~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~i   84 (251)
T d1vl8a_           6 RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF-GKL   84 (251)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH-SCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHc-CCC
Confidence            8999999999999999999999999999999999999888887754 36789999999999999999999999999 799


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCc-cCCCCCChhhhhhHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG-VRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~-~~~~~~~~~Y~~sK~a~~  158 (259)
                      |+||||||....+++.+.+.++|++++++|+.+++.++|.++|+|++++.|+||+++|..+ ..+.++..+|++||+|++
T Consensus        85 DiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~~~Y~asKaal~  164 (251)
T d1vl8a_          85 DTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVA  164 (251)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccccchHHHHHhHH
Confidence            9999999998888999999999999999999999999999999999988999999999765 457788899999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI  238 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~  238 (259)
                      +|+|+++.|++++|||||+|+||+++|++.+.....   +...+.+....|++|+++|+|++++++||++++++|+|||.
T Consensus       165 ~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~---~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~a~~itG~~  241 (251)
T d1vl8a_         165 SLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSD---PEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKYVTGQI  241 (251)
T ss_dssp             HHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTC---HHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCC---HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhCCCcCcE
Confidence            999999999999999999999999999998765433   23677888899999999999999999999999999999999


Q ss_pred             EEeCCCcee
Q 024994          239 ICVDGGVTV  247 (259)
Q Consensus       239 l~~dgG~~~  247 (259)
                      |.+|||++-
T Consensus       242 i~vDGG~ta  250 (251)
T d1vl8a_         242 IFVDGGWTA  250 (251)
T ss_dssp             EEESTTGGG
T ss_pred             EEeCcCeeC
Confidence            999999863

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.3e-58  Score=381.00  Aligned_cols=244  Identities=62%  Similarity=0.984  Sum_probs=197.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||+++|++|+++|++|++++|+++++++..+++...+.++.++.+|++++++++++++++.+++++++|
T Consensus         9 K~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~id   88 (259)
T d1xq1a_           9 KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLD   88 (259)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCCcc
Confidence            79999999999999999999999999999999999999999999888889999999999999999999999999866899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      ++|||||.....++.+.+.++|++++++|+.+++.++|+++|+|++++.|+||++||..+..+.++..+|++||+|+.+|
T Consensus        89 ilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~l  168 (259)
T d1xq1a_          89 ILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQL  168 (259)
T ss_dssp             EEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHHHHHHHHH
T ss_pred             cccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccccccccccccccccchhhh
Confidence            99999999988999999999999999999999999999999999988889999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC  240 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~  240 (259)
                      +|+++.|++++|||||+|+||+++|++.......    ...+.+....|++|+++|+||+++++||++++++|+||+.|.
T Consensus       169 t~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~----~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~iTG~~i~  244 (259)
T d1xq1a_         169 ARNLACEWASDGIRANAVAPAVIATPLAEAVYDD----EFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYITGQTIC  244 (259)
T ss_dssp             HHHHHHHHGGGTCEEEEEECCSCC-----------------------------CCGGGGHHHHHHHTSGGGTTCCSCEEE
T ss_pred             hHHHHHHhcccCeEEEEeccCcccCHHhhhhchH----HHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcCCcCcEEE
Confidence            9999999999999999999999999998765432    245667788999999999999999999999999999999999


Q ss_pred             eCCCceee
Q 024994          241 VDGGVTVT  248 (259)
Q Consensus       241 ~dgG~~~~  248 (259)
                      +|||.+++
T Consensus       245 vDGG~s~~  252 (259)
T d1xq1a_         245 VDGGLTVN  252 (259)
T ss_dssp             CCCCEEET
T ss_pred             eCCCEECC
Confidence            99998875

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1e-58  Score=378.19  Aligned_cols=238  Identities=33%  Similarity=0.455  Sum_probs=224.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||+++|++|+++|++|++++|+++.++++.+++.   .+...+++|++|+++++++++++.+++ +++|
T Consensus         5 K~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD   80 (243)
T d1q7ba_           5 KIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG---ANGKGLMLNVTDPASIESVLEKIRAEF-GEVD   80 (243)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG---GGEEEEECCTTCHHHHHHHHHHHHHHT-CSCS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC---CCCcEEEEEecCHHHhhhhhhhhhccc-CCcc
Confidence            899999999999999999999999999999999999998887774   378889999999999999999999999 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.++|+++|+|.+++.|+||++||..+..+.++..+|++||+|+++|
T Consensus        81 ilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~~l  160 (243)
T d1q7ba_          81 ILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGF  160 (243)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHH
T ss_pred             eehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCCHHHHHHHHHHHHH
Confidence            99999999988999999999999999999999999999999999988889999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC  240 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~  240 (259)
                      +|+++.|++++|||||+|+||+++|++.....     +...+.+....|++|+++|+|++++++||++++++|+|||.|.
T Consensus       161 t~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~-----~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itGq~i~  235 (243)
T d1q7ba_         161 SKSLAREVASRGITVNVVAPGFIETDMTRALS-----DDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETLH  235 (243)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC-----HHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHhCccCeEEEEEecceEechhhhhhh-----hhHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCCcCCeEE
Confidence            99999999999999999999999999876543     2356777888999999999999999999999999999999999


Q ss_pred             eCCCcee
Q 024994          241 VDGGVTV  247 (259)
Q Consensus       241 ~dgG~~~  247 (259)
                      +|||.+|
T Consensus       236 vdGG~~~  242 (243)
T d1q7ba_         236 VNGGMYM  242 (243)
T ss_dssp             ESTTSSC
T ss_pred             ECCCeEe
Confidence            9999876

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=1.1e-58  Score=381.43  Aligned_cols=245  Identities=33%  Similarity=0.483  Sum_probs=228.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||+++|++|+++|++|++++|+++++++..+++.+.+.++.++++|++|+++++++++++.+++ +++|
T Consensus         3 KValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~-g~iD   81 (257)
T d2rhca1           3 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERY-GPVD   81 (257)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT-CSCS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHh-CCCC
Confidence            899999999999999999999999999999999999999999998888899999999999999999999999999 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHH--hHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPL--FKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~--~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      +||||||.....++.+.+.++|++++++|+.++++++|+++|+  |.+++.++||+++|..+..+.+...+|++||+|+.
T Consensus        82 ilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~~~Y~asKaal~  161 (257)
T d2rhca1          82 VLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVV  161 (257)
T ss_dssp             EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             EEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccchhHHHHHHHHH
Confidence            9999999998899999999999999999999999999999997  45666799999999999999999999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCc------CCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCC
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE------EGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAAS  232 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  232 (259)
                      +|+|+++.|++++|||||+|+||+++|++.....      .....+...+.+...+|++|+++|+|++++++||+|++++
T Consensus       162 ~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~PlgR~~~pedia~~v~fL~S~~s~  241 (257)
T d2rhca1         162 GFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAA  241 (257)
T ss_dssp             HHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHTSGGGT
T ss_pred             HHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhc
Confidence            9999999999999999999999999999875432      1233455778888999999999999999999999999999


Q ss_pred             CccccEEEeCCCce
Q 024994          233 YITGQIICVDGGVT  246 (259)
Q Consensus       233 ~~~G~~l~~dgG~~  246 (259)
                      |+|||.|.+|||.+
T Consensus       242 ~itG~~i~vDGG~~  255 (257)
T d2rhca1         242 AVTAQALNVCGGLG  255 (257)
T ss_dssp             TCCSCEEEESTTCC
T ss_pred             CCcCceEEECcCcc
Confidence            99999999999964

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=3.4e-58  Score=378.75  Aligned_cols=247  Identities=28%  Similarity=0.390  Sum_probs=227.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCCh-hHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ-IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||++|||+++|++|+++|++|++++|+. +.+++..+++++.+.++.++++|++|+++++++++++.+++ +++
T Consensus         8 K~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~-G~i   86 (261)
T d1geea_           8 KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF-GKL   86 (261)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH-SCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh-CCC
Confidence            8999999999999999999999999999999985 46778888888888899999999999999999999999999 799


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCC-EEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNG-SIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~-~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      |+||||||.....++.+.+.++|++++++|+.+++.++|+++|+|.+++.+ +|+++||..+..+.+...+|++||+|+.
T Consensus        87 DiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~~~Y~asKaal~  166 (261)
T d1geea_          87 DVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMK  166 (261)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             CEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCccccccccCCccch
Confidence            999999999888899999999999999999999999999999999877654 5999999999999999999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI  238 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~  238 (259)
                      +|+|+++.|++++|||||+|+||+++|++.......   +...+.+....|++|+++|+|++++++||++++++|+|||+
T Consensus       167 ~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~---~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~~itG~~  243 (261)
T d1geea_         167 LMTETLALEYAPKGIRVNNIGPGAINTPINAEKFAD---PEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTGIT  243 (261)
T ss_dssp             HHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHS---HHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             hhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCC---HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCCcCCe
Confidence            999999999999999999999999999987543322   23667788889999999999999999999999999999999


Q ss_pred             EEeCCCceeeecc
Q 024994          239 ICVDGGVTVTVNV  251 (259)
Q Consensus       239 l~~dgG~~~~~~~  251 (259)
                      |.+|||+++--+.
T Consensus       244 i~vDGG~sl~p~~  256 (261)
T d1geea_         244 LFADGGMTLYPSF  256 (261)
T ss_dssp             EEESTTGGGCGGG
T ss_pred             EEECCCeeCCCCC
Confidence            9999999985444

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=3.6e-58  Score=377.91  Aligned_cols=246  Identities=30%  Similarity=0.414  Sum_probs=227.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.+.++.++++|++|+++++++++++.+++ +++|
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD   80 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTL-GGFD   80 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHT-TCCC
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh-CCcc
Confidence            678999999999999999999999999999999999999999998888899999999999999999999999999 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      +||||||+...+++.+.+.++|++++++|+.++++++|+++|+|.+++ .++|+++||..+..+.+...+|++||+|+.+
T Consensus        81 ilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~  160 (255)
T d1gega_          81 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRG  160 (255)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred             EEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcccccchhCHHHHHh
Confidence            999999998888999999999999999999999999999999877654 5889999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCc------CCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE------EGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASY  233 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  233 (259)
                      |+|+++.|++++|||||+|+||+++|++.....      ...........+....|++|+++|+|++++++||+|++++|
T Consensus       161 ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a~~  240 (255)
T d1gega_         161 LTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDY  240 (255)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             hHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCC
Confidence            999999999999999999999999999865431      12223345667788899999999999999999999999999


Q ss_pred             ccccEEEeCCCcee
Q 024994          234 ITGQIICVDGGVTV  247 (259)
Q Consensus       234 ~~G~~l~~dgG~~~  247 (259)
                      +||+.|.+|||..+
T Consensus       241 itG~~i~vDGG~~~  254 (255)
T d1gega_         241 MTGQSLLIDGGMVF  254 (255)
T ss_dssp             CCSCEEEESSSSSC
T ss_pred             ccCcEEEecCCEEe
Confidence            99999999999865

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=1.8e-58  Score=376.99  Aligned_cols=241  Identities=30%  Similarity=0.437  Sum_probs=226.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEe-eCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTC-SRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      ++||||||++|||+++|++|+++|++|++. .|+++.++++.++++..+.++.++++|++|+++++++++++.+++ +++
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~i   80 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAW-GTI   80 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHS-SCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHc-CCC
Confidence            589999999999999999999999999886 567778888888888878899999999999999999999999999 799


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      |+||||||.....++.+.+.++|++++++|+.++++++|+++|+|.+++.|+||++||..+..+.++..+|++||+|+.+
T Consensus        81 DiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~  160 (244)
T d1edoa_          81 DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIG  160 (244)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHH
T ss_pred             CccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCCHHHHHHHHHHHH
Confidence            99999999998899999999999999999999999999999999998889999999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHh-CCCCCCccccE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLC-LPAASYITGQI  238 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~-~~~~~~~~G~~  238 (259)
                      |+|+++.|++++|||||+|+||+++|++.....     +...+.+....|++|+++|+|++++++||+ ++++.|+|||.
T Consensus       161 ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~-----~~~~~~~~~~~pl~R~~~p~dvA~~v~fLa~S~~a~~itG~~  235 (244)
T d1edoa_         161 FSKTAAREGASRNINVNVVCPGFIASDMTAKLG-----EDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQA  235 (244)
T ss_dssp             HHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC-----HHHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCSGGGGCCSCE
T ss_pred             ChHHHHHHHhhhCcEEEEEecceeccHHHHHhh-----HHHHHHHHhcCCCCCCcCHHHHHHHHHHHHCCchhcCCcCCe
Confidence            999999999999999999999999999876542     336677888999999999999999999996 89999999999


Q ss_pred             EEeCCCcee
Q 024994          239 ICVDGGVTV  247 (259)
Q Consensus       239 l~~dgG~~~  247 (259)
                      |.+|||.++
T Consensus       236 i~vdGG~si  244 (244)
T d1edoa_         236 FTIDGGIAI  244 (244)
T ss_dssp             EEESTTTTC
T ss_pred             EEeCCCeeC
Confidence            999999864

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=6.7e-58  Score=376.52  Aligned_cols=246  Identities=32%  Similarity=0.441  Sum_probs=226.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.++.++++|++|+++++++++++.+++ ++
T Consensus         5 K~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~-G~   83 (258)
T d1iy8a_           5 RVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF-GR   83 (258)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH-SC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHh-CC
Confidence            89999999999999999999999999999999999999888877644  4578999999999999999999999999 79


Q ss_pred             ccEEEEcCCCCC-CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHH
Q 024994           79 LNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAM  157 (259)
Q Consensus        79 id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~  157 (259)
                      +|+||||||+.. .+++++.+.++|++++++|+.++++++|+++|+|++++.|+||++||..+..+.+...+|++||+|+
T Consensus        84 iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal  163 (258)
T d1iy8a_          84 IDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGV  163 (258)
T ss_dssp             CSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHHHHHH
T ss_pred             CCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCCchHHHHHHHHH
Confidence            999999999764 4678899999999999999999999999999999988899999999999999999999999999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCc---CCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 024994          158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE---EGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYI  234 (259)
Q Consensus       158 ~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~  234 (259)
                      .+|+|+++.|++++|||||+|+||+++||+.....   .........+.+....|++|+++|+|++++++||++++++|+
T Consensus       164 ~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v~fL~S~~s~~i  243 (258)
T d1iy8a_         164 VGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDASYV  243 (258)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGGGTTC
T ss_pred             HHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCC
Confidence            99999999999999999999999999999875432   222334567778888999999999999999999999999999


Q ss_pred             cccEEEeCCCcee
Q 024994          235 TGQIICVDGGVTV  247 (259)
Q Consensus       235 ~G~~l~~dgG~~~  247 (259)
                      ||+.|.+|||++-
T Consensus       244 tG~~i~VDGG~sa  256 (258)
T d1iy8a_         244 NATVVPIDGGQSA  256 (258)
T ss_dssp             CSCEEEESTTTTT
T ss_pred             cCceEEcCcchhc
Confidence            9999999999874

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=9.9e-58  Score=376.43  Aligned_cols=245  Identities=29%  Similarity=0.361  Sum_probs=216.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCCh-hHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ-IELDARLHEWKN-KGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||++|||+++|++|+++|++|++++|+. +.+++..+++.+ .+.++.++++|++|+++++++++++.+++ ++
T Consensus         5 K~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-G~   83 (260)
T d1x1ta1           5 KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM-GR   83 (260)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH-SC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh-CC
Confidence            7999999999999999999999999999999974 567777776654 36689999999999999999999999999 79


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      +|+||||||+...+++.+.+.++|+++|++|+.+++.++|+++|+|++++.|+||++||..+..+.++..+|++||+|+.
T Consensus        84 iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~  163 (260)
T d1x1ta1          84 IDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVV  163 (260)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             CcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCCcchhhhhhhhHH
Confidence            99999999999889999999999999999999999999999999999988899999999999999999999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCC-------CchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCC
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGP-------EGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAA  231 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  231 (259)
                      +|+|+++.|++++|||||+|+||+++|++........       ......+.+....|++|+++|+|++++++||+++++
T Consensus       164 ~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S~~a  243 (260)
T d1x1ta1         164 GFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLASDAA  243 (260)
T ss_dssp             HHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHHHHHHHHHSGGG
T ss_pred             HhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhh
Confidence            9999999999999999999999999999986543211       112234556788999999999999999999999999


Q ss_pred             CCccccEEEeCCCce
Q 024994          232 SYITGQIICVDGGVT  246 (259)
Q Consensus       232 ~~~~G~~l~~dgG~~  246 (259)
                      +|+|||.|.+|||++
T Consensus       244 ~~itG~~i~vDGG~t  258 (260)
T d1x1ta1         244 AQITGTTVSVDGGWT  258 (260)
T ss_dssp             TTCCSCEEEESTTGG
T ss_pred             CCCcCCEEEECcchh
Confidence            999999999999975

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=1.1e-57  Score=372.99  Aligned_cols=241  Identities=30%  Similarity=0.356  Sum_probs=208.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||+++|+.|+++|++|++++|++...  ....+++.+.++.++++|++|+++++++++++.+++ +++|
T Consensus         6 KvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~--~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~-G~iD   82 (247)
T d2ew8a1           6 KLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPE--AEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTF-GRCD   82 (247)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHH--HHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHH--HHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHc-CCCC
Confidence            8999999999999999999999999999999987543  233455667789999999999999999999999999 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||.....++.+.+.++|++++++|+.++++++|+++|+|++++.|+||++||..+..+.++..+|++||+|+.+|
T Consensus        83 ilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~l  162 (247)
T d2ew8a1          83 ILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGF  162 (247)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcccccchhhhccHHHH
Confidence            99999999988899999999999999999999999999999999998889999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC  240 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~  240 (259)
                      +|+++.|++++|||||+|+||+++|++.........   .........|++|+++|+|++++++||++++++|+||+.|.
T Consensus       163 tk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~---~~~~~~~~~~l~r~~~pedvA~~v~fL~S~~s~~itG~~i~  239 (247)
T d2ew8a1         163 TRALASDLGKDGITVNAIAPSLVRTATTEASALSAM---FDVLPNMLQAIPRLQVPLDLTGAAAFLASDDASFITGQTLA  239 (247)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECCC---------------------CTTSSSCSCCCTHHHHHHHHHHTSGGGTTCCSCEEE
T ss_pred             HHHHHHHhcccCeEEEEEeeCCCCCccccccccchh---HHHHHHHhccCCCCCCHHHHHHHHHHHhCchhcCCcCCeEE
Confidence            999999999999999999999999999876543322   11222334588999999999999999999999999999999


Q ss_pred             eCCCcee
Q 024994          241 VDGGVTV  247 (259)
Q Consensus       241 ~dgG~~~  247 (259)
                      +|||..+
T Consensus       240 vDGG~~~  246 (247)
T d2ew8a1         240 VDGGMVR  246 (247)
T ss_dssp             ESSSCCC
T ss_pred             ECCCEec
Confidence            9999753

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=2.7e-57  Score=369.45  Aligned_cols=236  Identities=33%  Similarity=0.406  Sum_probs=221.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||+++|+.|+++|++|++++|++++++++.+++.   .++.++++|++|+++++++++++.+++ +++|
T Consensus         7 K~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~id   82 (244)
T d1nffa_           7 KVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA---DAARYVHLDVTQPAQWKAAVDTAVTAF-GGLH   82 (244)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG---GGEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh---CcceEEEeecCCHHHHHHHHHHHHHHh-CCCe
Confidence            899999999999999999999999999999999999988877764   478899999999999999999999999 7899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.++|.++|.|.+++.|+||++||..+..+.+...+|++||+++++|
T Consensus        83 ilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~l  162 (244)
T d1nffa_          83 VLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGL  162 (244)
T ss_dssp             EEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred             EEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccccccchhhHHHHHHHH
Confidence            99999999988999999999999999999999999999999999998899999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC  240 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~  240 (259)
                      +|+++.|++++|||||+|+||+++|++.....+.          ....|++|+++|+|++++++||++++++|+|||.|.
T Consensus       163 tk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~----------~~~~pl~R~~~p~diA~~v~fL~s~~s~~itG~~i~  232 (244)
T d1nffa_         163 TKSTALELGPSGIRVNSIHPGLVKTPMTDWVPED----------IFQTALGRAAEPVEVSNLVVYLASDESSYSTGAEFV  232 (244)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTT----------CSCCSSSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHhcccCEEEEEEeeCCccChhHhhhhHH----------HHhccccCCCCHHHHHHHHHHHhChhhCCCcCCEEE
Confidence            9999999999999999999999999998654332          235799999999999999999999999999999999


Q ss_pred             eCCCceeeec
Q 024994          241 VDGGVTVTVN  250 (259)
Q Consensus       241 ~dgG~~~~~~  250 (259)
                      +|||+...++
T Consensus       233 vDGG~~ag~~  242 (244)
T d1nffa_         233 VDGGTVAGLA  242 (244)
T ss_dssp             ESTTGGGSCC
T ss_pred             ECCCeecccc
Confidence            9999976543

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.2e-57  Score=372.74  Aligned_cols=241  Identities=33%  Similarity=0.460  Sum_probs=216.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||+++|+.|+++|++|++++|+++..+ ..+++     +..++++|++|+++++++++++.+++ +++|
T Consensus         6 K~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~-~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~-G~iD   78 (248)
T d2d1ya1           6 KGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKE-VAEAI-----GGAFFQVDLEDERERVRFVEEAAYAL-GRVD   78 (248)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHH-HHHHH-----TCEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHc-----CCeEEEEeCCCHHHHHHHHHHHHHhc-CCCC
Confidence            89999999999999999999999999999999987654 33333     34567999999999999999999999 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||...++++.+.+.++|++++++|+.++++++|+++|+|++++.|+||+++|..+..+.++..+|++||+|+.+|
T Consensus        79 iLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~l  158 (248)
T d2d1ya1          79 VLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNL  158 (248)
T ss_dssp             EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHHHHHH
T ss_pred             eEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccccchhHHHHHHHHHH
Confidence            99999999988999999999999999999999999999999999998899999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcC-CCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE-GPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      +|+++.|++++|||||+|+||+++|++...... ....+...+.+....|++|+++|+|++++++||++++++|+|||.|
T Consensus       159 tk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~s~~itG~~i  238 (248)
T d2d1ya1         159 TRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFITGAIL  238 (248)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCCCcEE
Confidence            999999999999999999999999998754321 2222335567788899999999999999999999999999999999


Q ss_pred             EeCCCceee
Q 024994          240 CVDGGVTVT  248 (259)
Q Consensus       240 ~~dgG~~~~  248 (259)
                      .+|||.+.+
T Consensus       239 ~vDGG~tas  247 (248)
T d2d1ya1         239 PVDGGMTAS  247 (248)
T ss_dssp             EESTTGGGB
T ss_pred             EcCcCcccc
Confidence            999998754

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=1.9e-57  Score=373.70  Aligned_cols=244  Identities=29%  Similarity=0.411  Sum_probs=224.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||+++|+.|+++|++|++++|+.+++++..+++   +.++.++++|++|+++++++++++.+++ +++|
T Consensus         6 K~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~---~~~~~~~~~Dvt~~~~v~~~~~~~~~~~-g~iD   81 (256)
T d1k2wa_           6 KTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI---GPAACAIALDVTDQASIDRCVAELLDRW-GSID   81 (256)
T ss_dssp             EEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCceEEEEeeCCCHHHHHHHHHHHHHHh-CCcc
Confidence            79999999999999999999999999999999999998888776   5688999999999999999999999999 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHh-CCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKA-SGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      +||||||....+++.+.+.++|++++++|+.+++.++|+++|.|.+ .+.|+||++||.++..+.+...+|++||+|+++
T Consensus        82 ilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~  161 (256)
T d1k2wa_          82 ILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVIS  161 (256)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred             EEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccccchhhhhhHHHH
Confidence            9999999998889999999999999999999999999999997655 457999999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCc------CCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE------EGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASY  233 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  233 (259)
                      |+|+++.|++++|||||+|+||+++|++.....      .....+...+.+....|++|+++|+|++++++||++++++|
T Consensus       162 lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p~evA~~v~fL~S~~a~~  241 (256)
T d1k2wa_         162 LTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLATPEADY  241 (256)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCHHHHHHHHHHTTSGGGTT
T ss_pred             HHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCC
Confidence            999999999999999999999999999964331      12223346677888999999999999999999999999999


Q ss_pred             ccccEEEeCCCceee
Q 024994          234 ITGQIICVDGGVTVT  248 (259)
Q Consensus       234 ~~G~~l~~dgG~~~~  248 (259)
                      +|||.|.+|||.+|+
T Consensus       242 iTG~~i~vDGG~~ms  256 (256)
T d1k2wa_         242 IVAQTYNVDGGNWMS  256 (256)
T ss_dssp             CCSCEEEESTTSSCC
T ss_pred             ccCceEEECcchhhC
Confidence            999999999998875

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=2.1e-57  Score=374.18  Aligned_cols=243  Identities=29%  Similarity=0.426  Sum_probs=226.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||+++|+.|+++|++|++++|+++.+++..+++.+.+.++.++.+|++|+++++++++++.+++ +++|
T Consensus         6 K~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD   84 (260)
T d1zema1           6 KVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF-GKID   84 (260)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh-CCCC
Confidence            799999999999999999999999999999999999999999998888899999999999999999999999999 7999


Q ss_pred             EEEEcCCCCC-CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      ++|||||... .+++.+.+.++|++++++|+.++++++++++|+|.+++.|+||++||..+..+.+...+|++||+|+.+
T Consensus        85 ilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~~  164 (260)
T d1zema1          85 FLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIA  164 (260)
T ss_dssp             EEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHHHHHH
T ss_pred             eehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcchHHHHHHHHHHHH
Confidence            9999999874 468999999999999999999999999999999998889999999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCC-----------CcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhC
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKP-----------FEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCL  228 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  228 (259)
                      |+|+++.|++++|||||+|+||+|+|++...           .......+...+.+...+|++|+++|+|++++++||+|
T Consensus       165 ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v~fL~S  244 (260)
T d1zema1         165 LTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAFLLG  244 (260)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHHHHHHS
T ss_pred             HHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            9999999999999999999999999998521           11223345567788889999999999999999999999


Q ss_pred             CCCCCccccEEEeCCC
Q 024994          229 PAASYITGQIICVDGG  244 (259)
Q Consensus       229 ~~~~~~~G~~l~~dgG  244 (259)
                      ++++|+|||.|.+|||
T Consensus       245 ~~s~~itG~~i~VDGG  260 (260)
T d1zema1         245 DDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             GGGTTCCSCEEEESCC
T ss_pred             chhcCccCCeEEeCCC
Confidence            9999999999999998

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=7e-57  Score=367.07  Aligned_cols=235  Identities=30%  Similarity=0.387  Sum_probs=217.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||+++|++|+++|++|++++|+++++++..+++     +..++++|++|+++++++++++.+++ +++|
T Consensus         6 K~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD   79 (242)
T d1ulsa_           6 KAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-----GAHPVVMDVADPASVERGFAEALAHL-GRLD   79 (242)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----TCEEEECCTTCHHHHHHHHHHHHHHH-SSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCeEEEEecCCHHHHHHHHHHHHHhc-CCce
Confidence            79999999999999999999999999999999999888776544     46788999999999999999999999 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||+....++.+.+.++|++++++|+.++++++|+++|.|.+++.+.++++|| .+..+.++..+|++||+|+.+|
T Consensus        80 ilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss-~~~~~~~~~~~Y~asKaal~~l  158 (242)
T d1ulsa_          80 GVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTAS-RVYLGNLGQANYAASMAGVVGL  158 (242)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECC-GGGGCCTTCHHHHHHHHHHHHH
T ss_pred             EEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeecc-ccccCCCCCcchHHHHHHHHHH
Confidence            999999999889999999999999999999999999999999999887777777776 5677889999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC  240 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~  240 (259)
                      +|+++.|++++|||||+|+||+++|++....     .+...+.+....|++|+++|+|++++++||++++++|+||+.|.
T Consensus       159 tk~lA~ela~~gIrVN~I~PG~v~T~~~~~~-----~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~s~~itG~~i~  233 (242)
T d1ulsa_         159 TRTLALELGRWGIRVNTLAPGFIETRMTAKV-----PEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFITGQVLF  233 (242)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBCCTTTSSS-----CHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHHhhhCcEEEEEeeCcccChhhhcC-----CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhchhhCCCCCcEEE
Confidence            9999999999999999999999999998654     23467788889999999999999999999999999999999999


Q ss_pred             eCCCcee
Q 024994          241 VDGGVTV  247 (259)
Q Consensus       241 ~dgG~~~  247 (259)
                      +|||+++
T Consensus       234 vDGG~t~  240 (242)
T d1ulsa_         234 VDGGRTI  240 (242)
T ss_dssp             ESTTTTT
T ss_pred             ECCCccC
Confidence            9999976

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=5.2e-57  Score=369.92  Aligned_cols=240  Identities=30%  Similarity=0.423  Sum_probs=222.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.. +.++.++++|++|+++++++++++.+++ +++|
T Consensus         7 K~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-G~iD   84 (251)
T d1zk4a1           7 KVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT-PDQIQFFQHDSSDEDGWTKLFDATEKAF-GPVS   84 (251)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHH-SSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC-CCcEEEEEccCCCHHHHHHHHHHHHHHh-CCce
Confidence            7999999999999999999999999999999999999988888754 4589999999999999999999999999 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCC-CEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGN-GSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      +||||||....+++.+.+.++|++++++|+.+++.++++++|+|.+++. ++||++||..+..+.|...+|++||+++.+
T Consensus        85 iLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~~~Y~asKaal~~  164 (251)
T d1zk4a1          85 TLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRI  164 (251)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred             EEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCchhHHHHHHHHhc
Confidence            9999999998899999999999999999999999999999999998775 489999999999999999999999999999


Q ss_pred             HHHHHHHH--HccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcccc
Q 024994          160 LTKNLACE--WAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ  237 (259)
Q Consensus       160 ~~~~~a~e--~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~  237 (259)
                      |+|++|.|  +.++|||||+|+||+++|++......    ...........|++|+++|+|++++++||++++++|+||+
T Consensus       165 lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~----~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG~  240 (251)
T d1zk4a1         165 MSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPG----AEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFATGS  240 (251)
T ss_dssp             HHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTT----HHHHHTSTTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             chHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCC----HHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhCCCcCc
Confidence            99999998  56889999999999999999765432    2245556677899999999999999999999999999999


Q ss_pred             EEEeCCCce
Q 024994          238 IICVDGGVT  246 (259)
Q Consensus       238 ~l~~dgG~~  246 (259)
                      .|.+|||++
T Consensus       241 ~i~vDGG~t  249 (251)
T d1zk4a1         241 EFVVDGGYT  249 (251)
T ss_dssp             EEEESTTGG
T ss_pred             EEEECcccc
Confidence            999999986

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=4.9e-57  Score=370.00  Aligned_cols=238  Identities=32%  Similarity=0.404  Sum_probs=220.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++   +.++.++++|++|+++++++++++.+++ +++|
T Consensus         6 K~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD   81 (254)
T d1hdca_           6 KTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEF-GSVD   81 (254)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCceEEEEcccCCHHHHHHHHHHHHHHc-CCcc
Confidence            79999999999999999999999999999999999888776665   4589999999999999999999999999 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.++|+++|+|++++.|+||++||..+..+.++..+|++||+|+.+|
T Consensus        82 ilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~~l  161 (254)
T d1hdca_          82 GLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGL  161 (254)
T ss_dssp             EEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred             EEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccchhhHHHHHHHHHHH
Confidence            99999999988899999999999999999999999999999999988899999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCC-CHHHHHHHHHHHhCCCCCCccccEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAG-EPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      +|+++.|++++|||||+|+||+++|++........     .+......|++|++ .|+|++++++||+|++++|+||+.|
T Consensus       162 t~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~~-----~~~~~~~~pl~R~g~~PedvA~~v~fL~S~~a~~itG~~i  236 (254)
T d1hdca_         162 SKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQ-----GEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAEL  236 (254)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCC-----STTSCTTSTTSSCB-CHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHhCCCceEEEEeeeCcccCccchhcCHHH-----HHHHHhCCCCCCCCCCHHHHHHHHHHHhchhhCCCCCceE
Confidence            99999999999999999999999999876543322     23445678999997 6999999999999999999999999


Q ss_pred             EeCCCcee
Q 024994          240 CVDGGVTV  247 (259)
Q Consensus       240 ~~dgG~~~  247 (259)
                      .+|||++.
T Consensus       237 ~vDGG~t~  244 (254)
T d1hdca_         237 AVDGGWTT  244 (254)
T ss_dssp             EESTTTTT
T ss_pred             EeCCCccC
Confidence            99999875

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=5.5e-56  Score=365.06  Aligned_cols=248  Identities=58%  Similarity=0.935  Sum_probs=227.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+||||||++|||+++|++|+++|++|++++|+++++++..+++.+.+..++++.+|+++.++++++++++.+++++++|
T Consensus         7 K~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~id   86 (258)
T d1ae1a_           7 TTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLN   86 (258)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCCcE
Confidence            89999999999999999999999999999999999999999999888889999999999999999999999999966899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||.....++.+++.++|++++++|+.+++.+.++++|.|.+++.|+||++||..+..+.+...+|+++|+|+++|
T Consensus        87 ilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~al~~l  166 (258)
T d1ae1a_          87 ILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQM  166 (258)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred             EEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccccchhHHHHHHHHHHH
Confidence            99999999988999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcC-CCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE-GPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      +|++++|++++|||||+|+||+++|++...... ........+.+....|++|+++|+|++++++||++++++|+||+.|
T Consensus       167 t~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plgR~~~pediA~~v~fL~S~~s~~itG~~i  246 (258)
T d1ae1a_         167 TKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASYITGQII  246 (258)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhCCCcCcEE
Confidence            999999999999999999999999999876543 2334567788888999999999999999999999999999999999


Q ss_pred             EeCCCceee
Q 024994          240 CVDGGVTVT  248 (259)
Q Consensus       240 ~~dgG~~~~  248 (259)
                      .+|||++..
T Consensus       247 ~vDGG~s~~  255 (258)
T d1ae1a_         247 WADGGFTAN  255 (258)
T ss_dssp             EESTTGGGC
T ss_pred             EeCCCeecc
Confidence            999998864

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=6.1e-56  Score=367.22  Aligned_cols=248  Identities=24%  Similarity=0.341  Sum_probs=220.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+||||||++|||+++|++|+++|++|++++|+++++++..+++... ..+.++++|++|+++++++++++.+++ +++|
T Consensus         7 KvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD   84 (268)
T d2bgka1           7 KVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP-DVISFVHCDVTKDEDVRNLVDTTIAKH-GKLD   84 (268)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT-TTEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCC-CceEEEEccCCCHHHHHHHHHHHHHHc-CCcc
Confidence            89999999999999999999999999999999999999998888654 368889999999999999999999999 7999


Q ss_pred             EEEEcCCCCCCC--CCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCC-hhhhhhHHHH
Q 024994           81 ILINNAAIAFVK--PTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSV-SLYGAYKGAM  157 (259)
Q Consensus        81 ~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~-~~Y~~sK~a~  157 (259)
                      ++|||||.....  .+.+.+.++|++++++|+.+++.++|+++|+|.+++.|++|+++|..+..+.++. .+|++||+|+
T Consensus        85 ~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~~Y~asKaal  164 (268)
T d2bgka1          85 IMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAV  164 (268)
T ss_dssp             EEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHHHHHH
T ss_pred             eeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccccccccccchhHHHH
Confidence            999999986554  4678899999999999999999999999999999889999999999998876654 5899999999


Q ss_pred             HHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcccc
Q 024994          158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ  237 (259)
Q Consensus       158 ~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~  237 (259)
                      ++|+|+++.|++++|||||+|+||+++|++.....................|.+|+++|+||+++++||++++++|+|||
T Consensus       165 ~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s~~itGq  244 (268)
T d2bgka1         165 LGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKYVSGL  244 (268)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccCCCCcCHHHHHHHHHHHhChhhCCccCc
Confidence            99999999999999999999999999999987765433322222222334678999999999999999999999999999


Q ss_pred             EEEeCCCceeeec
Q 024994          238 IICVDGGVTVTVN  250 (259)
Q Consensus       238 ~l~~dgG~~~~~~  250 (259)
                      .|.+|||++.+.+
T Consensus       245 ~i~VDGG~t~~~p  257 (268)
T d2bgka1         245 NLVIDGGYTRTNP  257 (268)
T ss_dssp             EEEESTTGGGCCT
T ss_pred             eEEECcCcccCCC
Confidence            9999999987644

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=7.1e-57  Score=365.78  Aligned_cols=230  Identities=31%  Similarity=0.476  Sum_probs=206.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||+++|++|+++|++|++++|+.+..           .++..+++|++|+++++++++++.+++ +++|
T Consensus         8 K~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~-----------~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD   75 (237)
T d1uzma1           8 RSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP-----------KGLFGVEVDVTDSDAVDRAFTAVEEHQ-GPVE   75 (237)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC-----------TTSEEEECCTTCHHHHHHHHHHHHHHH-SSCS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh-----------cCceEEEEecCCHHHHHHHHHHHHHhc-CCce
Confidence            8999999999999999999999999999999987653           256788999999999999999999999 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.++|.++|+|.+++.++||++||..+..+.++..+|++||+|+++|
T Consensus        76 iLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l  155 (237)
T d1uzma1          76 VLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGM  155 (237)
T ss_dssp             EEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHHHHHHH
T ss_pred             EEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCcccHHHHHHHHHHHHH
Confidence            99999999988899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC  240 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~  240 (259)
                      +|+++.|++++|||||+|+||+++|++.+...     +...+.+....|++|+++|||++++++||++++++|+|||.|.
T Consensus       156 t~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~-----~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG~~i~  230 (237)
T d1uzma1         156 ARSIARELSKANVTANVVAPGYIDTDMTRALD-----ERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIP  230 (237)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBCCHHHHHSC-----HHHHHHHGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHhhhhcCCceeeeeeeCcCCChhhhccC-----HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCCeEE
Confidence            99999999999999999999999999876542     3366777889999999999999999999999999999999999


Q ss_pred             eCCCcee
Q 024994          241 VDGGVTV  247 (259)
Q Consensus       241 ~dgG~~~  247 (259)
                      +|||.+|
T Consensus       231 vdGG~~m  237 (237)
T d1uzma1         231 VDGGMGM  237 (237)
T ss_dssp             ESTTTTC
T ss_pred             ECCCCCC
Confidence            9999765

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-56  Score=367.43  Aligned_cols=240  Identities=28%  Similarity=0.427  Sum_probs=218.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||+++|+.|+++|++|++++|+++.++++.+++    .+..++.+|++|+++++++++++.+++ +++|
T Consensus         7 K~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~----~~~~~~~~Dvs~~~~v~~~~~~~~~~~-g~iD   81 (250)
T d1ydea1           7 KVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL----PGAVFILCDVTQEDDVKTLVSETIRRF-GRLD   81 (250)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----TTEEEEECCTTSHHHHHHHHHHHHHHH-SCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----CCCeEEEccCCCHHHHHHHHHHHHHhc-CCCC
Confidence            89999999999999999999999999999999999888776654    368899999999999999999999999 7999


Q ss_pred             EEEEcCCCCC-CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      +||||||... ..++++.+.++|++++++|+.+++.++|+++|+|+++ .|+||++||..+..+.+...+|+++|+|+.+
T Consensus        82 ilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~  160 (250)
T d1ydea1          82 CVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQAQAVPYVATKGAVTA  160 (250)
T ss_dssp             EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCCTTCHHHHHHHHHHHH
T ss_pred             EEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC-CCCCcccccccccccccCcchhHHHHhhHHH
Confidence            9999999764 4577889999999999999999999999999999875 5999999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcC-CCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE-GPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI  238 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~  238 (259)
                      |+|+++.|++++|||||+|+||+|+|++.+.... .+......+......|++|+++|+|++++++||+++ ++|+|||.
T Consensus       161 lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eva~~v~fL~Sd-a~~itG~~  239 (250)
T d1ydea1         161 MTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE-ANFCTGIE  239 (250)
T ss_dssp             HHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHHH-CTTCCSCE
T ss_pred             HHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc-cCCCcCCe
Confidence            9999999999999999999999999998765432 223334566667788999999999999999999996 78999999


Q ss_pred             EEeCCCcee
Q 024994          239 ICVDGGVTV  247 (259)
Q Consensus       239 l~~dgG~~~  247 (259)
                      |.+|||.++
T Consensus       240 i~vDGG~~l  248 (250)
T d1ydea1         240 LLVTGGAEL  248 (250)
T ss_dssp             EEESTTTTS
T ss_pred             EEECCCccc
Confidence            999999886

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=2e-56  Score=366.73  Aligned_cols=241  Identities=29%  Similarity=0.316  Sum_probs=220.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||+++|+.|+++|++|++++|++++++++.+++   +.+..++++|++|+++++++++++.+++ +++|
T Consensus         7 K~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~-g~iD   82 (253)
T d1hxha_           7 KVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRL-GTLN   82 (253)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHH-CSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCCeEEEEeecCCHHHHHHHHHHHHHHh-CCCC
Confidence            79999999999999999999999999999999999998888776   4578899999999999999999999999 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.++++++|+|+++ +|+||++||..+..+.+...+|++||+|+.+|
T Consensus        83 ilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~l  161 (253)
T d1hxha_          83 VLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET-GGSIINMASVSSWLPIEQYAGYSASKAAVSAL  161 (253)
T ss_dssp             EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred             eEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc-CCceecccchhhhcCccccccccchhHHHHHH
Confidence            99999999888899999999999999999999999999999999764 69999999999999999999999999999999


Q ss_pred             HHHHHHHHccC--CceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 024994          161 TKNLACEWAKD--NIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI  238 (259)
Q Consensus       161 ~~~~a~e~~~~--gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~  238 (259)
                      +|+++.|++++  +||||+|+||+++|++.....+....+..........|++|+++|+|++++++||+|++++|+|||.
T Consensus       162 t~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s~~itG~~  241 (253)
T d1hxha_         162 TRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVMSGSE  241 (253)
T ss_dssp             HHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCccccccCCCCCHHHHHHHHHHHhChhhCCCcCcE
Confidence            99999999885  5999999999999999765544444444555555566789999999999999999999999999999


Q ss_pred             EEeCCCce
Q 024994          239 ICVDGGVT  246 (259)
Q Consensus       239 l~~dgG~~  246 (259)
                      |.+|||..
T Consensus       242 i~VDGG~~  249 (253)
T d1hxha_         242 LHADNSIL  249 (253)
T ss_dssp             EEESSSCT
T ss_pred             EEECccHh
Confidence            99999964

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=2.6e-55  Score=362.72  Aligned_cols=245  Identities=29%  Similarity=0.469  Sum_probs=208.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcC---CcEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG---FKVTGSVCDLSSREQREKLIETVTSIFQG   77 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (259)
                      |++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.+   .++.++++|++|+++++++++++.+++ +
T Consensus         6 KvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~-g   84 (264)
T d1spxa_           6 KVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF-G   84 (264)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH-S
T ss_pred             CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHh-C
Confidence            899999999999999999999999999999999999999999987653   369999999999999999999999999 7


Q ss_pred             CccEEEEcCCCCCCC----CCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCC-CccCCCCCChhhhh
Q 024994           78 KLNILINNAAIAFVK----PTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSV-GGVRGIPSVSLYGA  152 (259)
Q Consensus        78 ~id~vi~~ag~~~~~----~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~-~~~~~~~~~~~Y~~  152 (259)
                      ++|+||||||...+.    ++.+.+.++|++++++|+.+++.++|+++|+|++++ +++|+++|. ++..+.+...+|++
T Consensus        85 ~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~S~~~~~~~~~~~~~Y~a  163 (264)
T d1spxa_          85 KLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFPYYSI  163 (264)
T ss_dssp             CCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTSHHHHH
T ss_pred             CCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc-CcceeeeeeccccccCCCchhhhh
Confidence            999999999986433    456678999999999999999999999999998764 666666665 46789999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCC----CchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhC
Q 024994          153 YKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGP----EGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCL  228 (259)
Q Consensus       153 sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  228 (259)
                      ||+|+++|+|+++.|++++|||||+|+||+++|++........    ........+.+.+|++|+++|+|++++++||+|
T Consensus       164 sKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v~fL~S  243 (264)
T d1spxa_         164 AKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFLAD  243 (264)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHHHHHHHHHHHHC
T ss_pred             hhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999999986543221    223345666788999999999999999999999


Q ss_pred             CC-CCCccccEEEeCCCcee
Q 024994          229 PA-ASYITGQIICVDGGVTV  247 (259)
Q Consensus       229 ~~-~~~~~G~~l~~dgG~~~  247 (259)
                      ++ ++|+||+.|.+|||+++
T Consensus       244 ~~~s~~itG~~i~vDGG~sl  263 (264)
T d1spxa_         244 RKTSSYIIGHQLVVDGGSSL  263 (264)
T ss_dssp             HHHHTTCCSCEEEESTTGGG
T ss_pred             CcccCCccCceEEeCCChhh
Confidence            54 89999999999999986

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=1.2e-55  Score=362.33  Aligned_cols=247  Identities=23%  Similarity=0.283  Sum_probs=223.4

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCccE
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNI   81 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~   81 (259)
                      |+|||||++|||+++|++|+++|++|++++|+.+.++++......      +.++|+++.++++++++++.+++ +++|+
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~------~~~~dv~~~~~~~~~~~~~~~~~-G~iDi   74 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAET------YPQLKPMSEQEPAELIEAVTSAY-GQVDV   74 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHH------CTTSEECCCCSHHHHHHHHHHHH-SCCCE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCc------EEEeccCCHHHHHHHHHHHHHHc-CCCCE
Confidence            899999999999999999999999999999998888776543322      23689999999999999999999 79999


Q ss_pred             EEEcCCCCC-CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           82 LINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        82 vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      ||||||+.. .+++.+.+.++|++++++|+.++++++|+++|+|++++.|+||++||..+..+.+...+|++||+|+.+|
T Consensus        75 LVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~~~Y~asKaal~~l  154 (252)
T d1zmta1          75 LVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTL  154 (252)
T ss_dssp             EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHH
T ss_pred             EEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccccccccccccccHHHH
Confidence            999999864 4788999999999999999999999999999999998889999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCC---CCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcccc
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEG---PEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQ  237 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~  237 (259)
                      +|+++.|++++|||||+|+||+++|++.......   ...++..+.+....|++|+++|+|++++++||+|++++|+|||
T Consensus       155 t~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~iTG~  234 (252)
T d1zmta1         155 ANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYLTGQ  234 (252)
T ss_dssp             HHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTTSCGGGTTC
T ss_pred             HHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCC
Confidence            9999999999999999999999999998665321   2234467778889999999999999999999999999999999


Q ss_pred             EEEeCCCceeeecccccc
Q 024994          238 IICVDGGVTVTVNVNGLR  255 (259)
Q Consensus       238 ~l~~dgG~~~~~~~~~~~  255 (259)
                      .|.+|||++|-..|-|++
T Consensus       235 ~i~vdGG~~~~~~~p~~p  252 (252)
T d1zmta1         235 VFWLAGGFPMIERWPGMP  252 (252)
T ss_dssp             EEEESTTCCCCCCCTTCC
T ss_pred             eEEECCCceeCCCCCcCC
Confidence            999999999977777764

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-55  Score=359.81  Aligned_cols=234  Identities=31%  Similarity=0.439  Sum_probs=214.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||+++|++|+++|++|++++|++++++++.+++.    .+..+.+|++|+++++++++    ++ +++|
T Consensus         8 K~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~----~~-g~iD   78 (244)
T d1pr9a_           8 RRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP----GIEPVCVDLGDWEATERALG----SV-GPVD   78 (244)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHT----TC-CCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC----CCeEEEEeCCCHHHHHHHHH----Hh-CCce
Confidence            799999999999999999999999999999999999888776653    57788999999999887765    45 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhH-hCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFK-ASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.+++.++|.|. +.+.|+||++||..+..+.+...+|++||+|+++
T Consensus        79 ilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~  158 (244)
T d1pr9a_          79 LLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDM  158 (244)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred             EEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccchhhhhhhHHHHHH
Confidence            999999999889999999999999999999999999999999754 5567999999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      |+|+++.|++++|||||+|+||+++|++.+.....   ....+.+....|++|+++|+|++++++||++++++|+|||.|
T Consensus       159 lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~---~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a~~itG~~i  235 (244)
T d1pr9a_         159 LTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSD---PHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGSTL  235 (244)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCS---HHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccC---hHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCcCCcEE
Confidence            99999999999999999999999999997665433   336677788999999999999999999999999999999999


Q ss_pred             EeCCCce
Q 024994          240 CVDGGVT  246 (259)
Q Consensus       240 ~~dgG~~  246 (259)
                      .+|||++
T Consensus       236 ~vDGG~~  242 (244)
T d1pr9a_         236 PVEGGFW  242 (244)
T ss_dssp             EESTTGG
T ss_pred             EECccHh
Confidence            9999985

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=4.4e-55  Score=362.92  Aligned_cols=250  Identities=26%  Similarity=0.434  Sum_probs=222.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcC---CcEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG---FKVTGSVCDLSSREQREKLIETVTSIFQG   77 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (259)
                      |++|||||++|||+++|++|+++|++|++++|+++++++..+++.+.+   .++.++.+|++|+++++++++++.+++ +
T Consensus         5 K~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-G   83 (274)
T d1xhla_           5 KSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF-G   83 (274)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH-S
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHc-C
Confidence            899999999999999999999999999999999999999999987653   468999999999999999999999999 7


Q ss_pred             CccEEEEcCCCCCCC--CCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHH
Q 024994           78 KLNILINNAAIAFVK--PTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKG  155 (259)
Q Consensus        78 ~id~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~  155 (259)
                      ++|++|||||.....  +..+.+.++|++++++|+.+++.++|+++|+|.+++.++|+++||.++..+.+++.+|++||+
T Consensus        84 ~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~~~~Y~asKa  163 (274)
T d1xhla_          84 KIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKA  163 (274)
T ss_dssp             CCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHHHHHHHH
T ss_pred             CceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCCCceehhhhh
Confidence            999999999976444  445678999999999999999999999999999988899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCc----hHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCC-C
Q 024994          156 AMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEG----SEFLDGIARQTPIGRAGEPDEVSSLVAFLCLP-A  230 (259)
Q Consensus       156 a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~-~  230 (259)
                      |+.+|+|++|.|++++|||||+|+||+++||+..........    ..........+|++|+++|+|++++++||+|+ .
T Consensus       164 al~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlgR~g~pediA~~v~fL~S~d~  243 (274)
T d1xhla_         164 ALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLADRNL  243 (274)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHCHHH
T ss_pred             HHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcCCcc
Confidence            999999999999999999999999999999987654332211    12233445668999999999999999999994 6


Q ss_pred             CCCccccEEEeCCCceeeecc
Q 024994          231 ASYITGQIICVDGGVTVTVNV  251 (259)
Q Consensus       231 ~~~~~G~~l~~dgG~~~~~~~  251 (259)
                      ++|+||+.|.+|||+++..++
T Consensus       244 s~~itG~~i~vDGG~~l~~g~  264 (274)
T d1xhla_         244 SSYIIGQSIVADGGSTLVMGM  264 (274)
T ss_dssp             HTTCCSCEEEESTTGGGCCGG
T ss_pred             ccCccCcEEEeCcCHHHhcCC
Confidence            899999999999999886543

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=3.4e-55  Score=363.36  Aligned_cols=248  Identities=29%  Similarity=0.464  Sum_probs=217.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcC---CcEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG---FKVTGSVCDLSSREQREKLIETVTSIFQG   77 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (259)
                      |++|||||++|||+++|++|+++|++|++++|+++++++..+++.+.+   .++.++++|++|+++++++++++.+++ +
T Consensus         6 K~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~-g   84 (272)
T d1xkqa_           6 KTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF-G   84 (272)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH-S
T ss_pred             CEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHh-C
Confidence            899999999999999999999999999999999999999999987653   469999999999999999999999999 7


Q ss_pred             CccEEEEcCCCCCCCCC----CCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecC-CCccCCCCCChhhhh
Q 024994           78 KLNILINNAAIAFVKPT----VDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISS-VGGVRGIPSVSLYGA  152 (259)
Q Consensus        78 ~id~vi~~ag~~~~~~~----~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS-~~~~~~~~~~~~Y~~  152 (259)
                      ++|++|||||...+.++    .+.+.++|++++++|+.+++.++|+++|+|++++ +.+|+++| .++..+.++..+|++
T Consensus        85 ~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~Ss~a~~~~~~~~~~Y~a  163 (272)
T d1xkqa_          85 KIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDFLYYAI  163 (272)
T ss_dssp             CCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCSSHHHHH
T ss_pred             CceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccC-CccccccchhccccCCCCcchhhh
Confidence            99999999998766544    4567889999999999999999999999998765 55555555 577899999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCc----hHHHHhhhhcCCCCCCCCHHHHHHHHHHHhC
Q 024994          153 YKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEG----SEFLDGIARQTPIGRAGEPDEVSSLVAFLCL  228 (259)
Q Consensus       153 sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  228 (259)
                      ||+|+.+|+|+++.|++++|||||+|+||+|+|++..........    ..........+|++|+++|+|++++++||+|
T Consensus       164 sKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pediA~~v~fL~S  243 (272)
T d1xkqa_         164 AKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFLAD  243 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhC
Confidence            999999999999999999999999999999999997655332211    1233445567899999999999999999999


Q ss_pred             CC-CCCccccEEEeCCCceeeec
Q 024994          229 PA-ASYITGQIICVDGGVTVTVN  250 (259)
Q Consensus       229 ~~-~~~~~G~~l~~dgG~~~~~~  250 (259)
                      ++ +.|+|||.|.+|||+++..+
T Consensus       244 ~~as~~iTG~~i~vDGG~~l~~g  266 (272)
T d1xkqa_         244 RNLSFYILGQSIVADGGTSLVMG  266 (272)
T ss_dssp             HHHHTTCCSCEEEESTTGGGCBG
T ss_pred             cchhCCccCeEEEeCcCHHHhcC
Confidence            65 57999999999999998643

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.4e-55  Score=359.42  Aligned_cols=234  Identities=32%  Similarity=0.442  Sum_probs=214.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||+++|++|+++|++|++++|++++++++.+++.    ++..+.+|++|+++++++++    ++ +++|
T Consensus         6 K~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~----~~~~~~~Dv~~~~~v~~~~~----~~-g~iD   76 (242)
T d1cyda_           6 LRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP----GIEPVCVDLGDWDATEKALG----GI-GPVD   76 (242)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHT----TC-CCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC----CCeEEEEeCCCHHHHHHHHH----Hc-CCCe
Confidence            899999999999999999999999999999999998888776643    57788999999999877665    45 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHh-CCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKA-SGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      +||||||....+++.+.+.++|++++++|+.++++++|.+.|.|.+ ...|+||+++|..+..+.|...+|+++|+|+.+
T Consensus        77 ilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asKaal~~  156 (242)
T d1cyda_          77 LLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTM  156 (242)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred             EEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCccccccchHHHHHH
Confidence            9999999988899999999999999999999999999999998654 457899999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII  239 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l  239 (259)
                      |+|+++.|++++|||||+|+||+++|++.......   +...+.+.+..|++|+++|+|++++++||++++++|+|||.|
T Consensus       157 lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~---~~~~~~~~~~~pl~R~~~peeva~~v~fL~S~~s~~itG~~i  233 (242)
T d1cyda_         157 LTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSAD---PEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTSGGGI  233 (242)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCC---HHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSSEE
T ss_pred             HHHHHHHHhCccCeecccCCCCCccCHHHHhhcCC---HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCcCCceE
Confidence            99999999999999999999999999987655433   347778888999999999999999999999999999999999


Q ss_pred             EeCCCce
Q 024994          240 CVDGGVT  246 (259)
Q Consensus       240 ~~dgG~~  246 (259)
                      .+|||+.
T Consensus       234 ~vDGG~~  240 (242)
T d1cyda_         234 LVDAGYL  240 (242)
T ss_dssp             EESTTGG
T ss_pred             EeCcchh
Confidence            9999975

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-54  Score=363.71  Aligned_cols=245  Identities=36%  Similarity=0.520  Sum_probs=224.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhc-----CCcEEEEEecCCCHHHHHHHHHHHHHHc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-----GFKVTGSVCDLSSREQREKLIETVTSIF   75 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (259)
                      |+||||||++|||+++|++|+++|++|++++|+.+++++..+++...     +.++.++++|++|+++++++++++.+.+
T Consensus        13 KvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~   92 (297)
T d1yxma1          13 QVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTF   92 (297)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHHHHh
Confidence            89999999999999999999999999999999999999988888642     5689999999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHH
Q 024994           76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKG  155 (259)
Q Consensus        76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~  155 (259)
                       +++|+||||||.....++.+.+.++|++++++|+.+++.++|+++|.|.+++.++||++|| ++..+.+....|++||+
T Consensus        93 -G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss-~~~~~~~~~~~Y~asKa  170 (297)
T d1yxma1          93 -GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIV-PTKAGFPLAVHSGAARA  170 (297)
T ss_dssp             -SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECC-CCTTCCTTCHHHHHHHH
T ss_pred             -CCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccc-cccccccccccchhHHH
Confidence             7999999999998888999999999999999999999999999999999988899999866 45567889999999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcc
Q 024994          156 AMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT  235 (259)
Q Consensus       156 a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~  235 (259)
                      |+.+|+|++|.|++++|||||+|+||+|+|++....... ..+...+.....+|++|+++|+|++++++||+|+.+.|+|
T Consensus       171 al~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~-~~~~~~~~~~~~~plgR~g~pedvA~~v~fL~Sd~s~~iT  249 (297)
T d1yxma1         171 GVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGS-WGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAASFIT  249 (297)
T ss_dssp             HHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGG-GGGGGGTTGGGGSTTSSCBCTHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccc-cCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCcC
Confidence            999999999999999999999999999999987544322 2234566777889999999999999999999999999999


Q ss_pred             ccEEEeCCCceee
Q 024994          236 GQIICVDGGVTVT  248 (259)
Q Consensus       236 G~~l~~dgG~~~~  248 (259)
                      ||.|.+|||+++-
T Consensus       250 G~~i~VDGG~sl~  262 (297)
T d1yxma1         250 GQSVDVDGGRSLY  262 (297)
T ss_dssp             SCEEEESTTGGGC
T ss_pred             CcEEEeCcChhhh
Confidence            9999999999874

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=3e-54  Score=355.52  Aligned_cols=241  Identities=31%  Similarity=0.453  Sum_probs=218.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKN-KGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+ .+.++.++++|++|+++++++++++.+++ +++
T Consensus        10 K~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~i   88 (260)
T d1h5qa_          10 KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL-GPI   88 (260)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHS-CSE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHh-CCC
Confidence            7999999999999999999999999999999999998888777654 46789999999999999999999999999 799


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHh-CCCCEEEEecCCCccC-------CCCCChhhh
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKA-SGNGSIVFISSVGGVR-------GIPSVSLYG  151 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~ii~isS~~~~~-------~~~~~~~Y~  151 (259)
                      |++|||||.....++.+.+.++|++++++|+.+++.+++.+.|+|.+ ...++|++++|.....       +.++..+|+
T Consensus        89 DilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~~~~~~~Y~  168 (260)
T d1h5qa_          89 SGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYN  168 (260)
T ss_dssp             EEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSCHHHH
T ss_pred             cEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccccCccccchh
Confidence            99999999998889999999999999999999999999999999864 4567777777765543       345778999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCC
Q 024994          152 AYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAA  231 (259)
Q Consensus       152 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  231 (259)
                      +||+|+.+|+|+++.|++++|||||+|+||+++|++.....     +...+.+...+|++|+++|+|++++++||+|+++
T Consensus       169 asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~-----~~~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s  243 (260)
T d1h5qa_         169 SSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMD-----KKIRDHQASNIPLNRFAQPEEMTGQAILLLSDHA  243 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSC-----HHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGG
T ss_pred             hhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccC-----HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcchh
Confidence            99999999999999999999999999999999999886542     3467788899999999999999999999999999


Q ss_pred             CCccccEEEeCCCcee
Q 024994          232 SYITGQIICVDGGVTV  247 (259)
Q Consensus       232 ~~~~G~~l~~dgG~~~  247 (259)
                      +|+|||.|.+|||+.+
T Consensus       244 ~~itG~~i~VDGG~~~  259 (260)
T d1h5qa_         244 TYMTGGEYFIDGGQLI  259 (260)
T ss_dssp             TTCCSCEEEECTTGGG
T ss_pred             CCCcCceEEECCCeec
Confidence            9999999999999865

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=1.1e-53  Score=348.00  Aligned_cols=235  Identities=29%  Similarity=0.400  Sum_probs=209.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+||||||++|||+++|++|+++|++|++++|+.+++++..++   .+.++.++++|++++++++++++++.+++ +++|
T Consensus         6 K~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~Dls~~~~i~~~~~~i~~~~-g~iD   81 (241)
T d2a4ka1           6 KTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAA---LEAEAIAVVADVSDPKAVEAVFAEALEEF-GRLH   81 (241)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT---CCSSEEEEECCTTSHHHHHHHHHHHHHHH-SCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH---cCCceEEEEecCCCHHHHHHHHHHHHHHh-CCcc
Confidence            8999999999999999999999999999999999887765544   46689999999999999999999999999 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      ++|||||.....++.+.+.++|++++++|+.+++.++|+++|+|.+.  +.++++|| .+..+.|++..|+++|+|+++|
T Consensus        82 iLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~--~~i~~~ss-~a~~~~~~~~~Y~~sK~al~~l  158 (241)
T d2a4ka1          82 GVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEG--GSLVLTGS-VAGLGAFGLAHYAAGKLGVVGL  158 (241)
T ss_dssp             EEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTT--CEEEEECC-CTTCCHHHHHHHHHCSSHHHHH
T ss_pred             Eeccccccccccchhhhhccccccccccccccccccccccccccccc--cceeeccc-cccccccCccccchhhHHHHHH
Confidence            99999999988999999999999999999999999999999998653  55655555 4455668899999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC  240 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~  240 (259)
                      +|++++|++++|||||+|+||+++|++....+     +...+.+....|++|+++|+|++++++||++++++|+||++|.
T Consensus       159 t~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~-----~~~~~~~~~~~p~~r~~~p~dva~~v~fL~S~~s~~itG~~i~  233 (241)
T d2a4ka1         159 ARTLALELARKGVRVNVLLPGLIQTPMTAGLP-----PWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQALY  233 (241)
T ss_dssp             HHHHHHHHTTTTCEEEEEEECSBCCGGGTTSC-----HHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHHhHhCCEEeeeccCcCCCHHHHhhh-----HhHHHHHHhCCCCCCCcCHHHHHHHHHHHhcchhCCCcCceEE
Confidence            99999999999999999999999999876532     3367778888999999999999999999999999999999999


Q ss_pred             eCCCcee
Q 024994          241 VDGGVTV  247 (259)
Q Consensus       241 ~dgG~~~  247 (259)
                      +|||+++
T Consensus       234 vDGG~s~  240 (241)
T d2a4ka1         234 VDGGRSI  240 (241)
T ss_dssp             ESTTTTT
T ss_pred             eCCCccc
Confidence            9999875

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=5.4e-53  Score=347.89  Aligned_cols=242  Identities=27%  Similarity=0.421  Sum_probs=218.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEee-CChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCS-RNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |+||||||++|||+++|++|+++|++|++++ |+++.+++..+++.+.+.+++++++|++|+++++++++++.+++ +++
T Consensus         7 K~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~i   85 (259)
T d1ja9a_           7 KVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF-GGL   85 (259)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH-SCE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc-CCC
Confidence            8999999999999999999999999999865 56667788888888888899999999999999999999999999 789


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCc-cCCCCCChhhhhhHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG-VRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~-~~~~~~~~~Y~~sK~a~~  158 (259)
                      |++|||||.....++.+.+.++|++++++|+.+++.++++++|+|+++  +++++++|..+ ..+.+.+..|+++|+|++
T Consensus        86 dilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--g~~iii~s~~~~~~~~~~~~~Y~asK~al~  163 (259)
T d1ja9a_          86 DFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG--GRIILTSSIAAVMTGIPNHALYAGSKAAVE  163 (259)
T ss_dssp             EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE--EEEEEECCGGGTCCSCCSCHHHHHHHHHHH
T ss_pred             cEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcC--CcccccccccccccCCCCchhHHHHHHHHH
Confidence            999999999988899999999999999999999999999999999654  67777777655 447899999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCC--------cCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF--------EEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPA  230 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  230 (259)
                      +|+|+++.|++++|||||+|+||+++|++....        ......+...+.+....|++|+++|+||+++++||++++
T Consensus       164 ~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eVa~~v~fL~S~~  243 (259)
T d1ja9a_         164 GFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSALCQEE  243 (259)
T ss_dssp             HHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCch
Confidence            999999999999999999999999999975321        222334556777888999999999999999999999999


Q ss_pred             CCCccccEEEeCCCc
Q 024994          231 ASYITGQIICVDGGV  245 (259)
Q Consensus       231 ~~~~~G~~l~~dgG~  245 (259)
                      ++++||+.|.+|||.
T Consensus       244 a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         244 SEWINGQVIKLTGGG  258 (259)
T ss_dssp             GTTCCSCEEEESTTC
T ss_pred             hcCCcCceEEeCCCC
Confidence            999999999999996

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=6.3e-53  Score=350.25  Aligned_cols=245  Identities=28%  Similarity=0.340  Sum_probs=215.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||+++|++|+++|++|++++|+++++++..+++   +.++..+.+|+++.++++++++++.+++ +++|
T Consensus         6 K~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~-g~id   81 (276)
T d1bdba_           6 EAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH---GDNVLGIVGDVRSLEDQKQAASRCVARF-GKID   81 (276)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCCeeEEecccccHHHHHHHHHHHHHHh-CCcc
Confidence            79999999999999999999999999999999999988877665   4589999999999999999999999999 7999


Q ss_pred             EEEEcCCCCCCCC-----CCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHH
Q 024994           81 ILINNAAIAFVKP-----TVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKG  155 (259)
Q Consensus        81 ~vi~~ag~~~~~~-----~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~  155 (259)
                      ++|||||.....+     ..+.+.++|+++|++|+.+++.++|+++|+|+++ +|++|+++|..+..+.+...+|++||+
T Consensus        82 ilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-~g~iI~i~S~~~~~~~~~~~~Y~asKa  160 (276)
T d1bdba_          82 TLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVAS-RGNVIFTISNAGFYPNGGGPLYTAAKH  160 (276)
T ss_dssp             EEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCGGGTSTTSSCHHHHHHHH
T ss_pred             cccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhc-CCCceeeeechhccCCCCCchHHHHHH
Confidence            9999999864432     2444567899999999999999999999999876 489999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCC-----CCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhC-C
Q 024994          156 AMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEG-----PEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCL-P  229 (259)
Q Consensus       156 a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~-~  229 (259)
                      |+.+|+|++|.|+++. ||||+|+||+|+|++.......     ...+...+.+....|++|+++|+|++++++||++ +
T Consensus       161 al~~ltr~lA~ela~~-IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeva~~v~fL~S~~  239 (276)
T d1bdba_         161 AIVGLVRELAFELAPY-VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAYVFFATRG  239 (276)
T ss_dssp             HHHHHHHHHHHHHTTT-CEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTSSCCCGGGGSHHHHHHHCHH
T ss_pred             HHHHHHHHHHHHhhcc-eEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCc
Confidence            9999999999999975 9999999999999987543211     1222366777888999999999999999999998 4


Q ss_pred             CCCCccccEEEeCCCceeeecc
Q 024994          230 AASYITGQIICVDGGVTVTVNV  251 (259)
Q Consensus       230 ~~~~~~G~~l~~dgG~~~~~~~  251 (259)
                      ++.|+|||.|.+|||.++.-.+
T Consensus       240 ~a~~itG~~i~VDGG~~~~g~~  261 (276)
T d1bdba_         240 DAAPATGALLNYDGGLGVRGFF  261 (276)
T ss_dssp             HHTTCSSCEEEESSSGGGCCSS
T ss_pred             ccCCeeCcEEEECcChhhccee
Confidence            6899999999999999885433

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=1.2e-52  Score=341.51  Aligned_cols=229  Identities=24%  Similarity=0.334  Sum_probs=212.3

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCE-------EEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Q 024994            2 TALVTGGTRGIGHATVEELARFGAI-------VHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSI   74 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~-------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   74 (259)
                      +||||||++|||+++|++|+++|++       |++++|+.+.+++..+++.+.+.++.++++|++|+++++++++++.++
T Consensus         3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVER   82 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            5899999999999999999999997       999999999999999999888889999999999999999999999999


Q ss_pred             cCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhH
Q 024994           75 FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYK  154 (259)
Q Consensus        75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  154 (259)
                      + +++|+||||||.....++.+.+.++|++++++|+.++++++|+++|+|++++.|+||++||..+..+.|++..|++||
T Consensus        83 ~-g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asK  161 (240)
T d2bd0a1          83 Y-GHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSK  161 (240)
T ss_dssp             T-SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             c-CCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCCChHHHHHH
Confidence            9 799999999999988999999999999999999999999999999999998889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 024994          155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYI  234 (259)
Q Consensus       155 ~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~  234 (259)
                      +|+.+|+|+++.|++++|||||+|+||+++|++.....+..              ..++.+|+|++++++|++++.++++
T Consensus       162 ~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~~~--------------~~~~~~PedvA~~v~~l~s~~~~~~  227 (240)
T d2bd0a1         162 FGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDEM--------------QALMMMPEDIAAPVVQAYLQPSRTV  227 (240)
T ss_dssp             HHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCSTT--------------GGGSBCHHHHHHHHHHHHTSCTTEE
T ss_pred             HHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCHhh--------------HhcCCCHHHHHHHHHHHHcCCccCc
Confidence            99999999999999999999999999999999987653321              1356789999999999999888888


Q ss_pred             cccE-EEeCCCc
Q 024994          235 TGQI-ICVDGGV  245 (259)
Q Consensus       235 ~G~~-l~~dgG~  245 (259)
                      +|+. +..+||.
T Consensus       228 ~~~~~i~p~~G~  239 (240)
T d2bd0a1         228 VEEIILRPTSGD  239 (240)
T ss_dssp             EEEEEEEETTCC
T ss_pred             cCCEEEEecCCC
Confidence            8874 5577663

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=3.7e-53  Score=343.66  Aligned_cols=227  Identities=31%  Similarity=0.422  Sum_probs=205.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||+++|++|+++|++|++++|+++.+++.         ...++.+|+++.      ++.+.+++ +++|
T Consensus         5 K~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~---------~~~~~~~Dv~~~------~~~~~~~~-g~iD   68 (234)
T d1o5ia_           5 KGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS---------GHRYVVCDLRKD------LDLLFEKV-KEVD   68 (234)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT---------CSEEEECCTTTC------HHHHHHHS-CCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhc---------CCcEEEcchHHH------HHHHHHHh-CCCc
Confidence            8999999999999999999999999999999998765442         335678999863      44455667 7999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      +||||||.....++.+.+.++|++++++|+.+++.++|+++|+|++++.|+||+++|..+..+.+....|++||+|+.+|
T Consensus        69 ~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~~~Y~asKaal~~l  148 (234)
T d1o5ia_          69 ILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGF  148 (234)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred             EEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccccccccchhHHHHHHHH
Confidence            99999999888899999999999999999999999999999999998889999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEE
Q 024994          161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIIC  240 (259)
Q Consensus       161 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~  240 (259)
                      +|+++.|++++|||||+|+||+++|++......    +...+.+....|++|+++|+|++++++||++++++|+|||+|.
T Consensus       149 tk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~----~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~~itG~~i~  224 (234)
T d1o5ia_         149 LKTLSFEVAPYGITVNCVAPGWTETERVKELLS----EEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQTIV  224 (234)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSC----HHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHhcccCeEEeecccCccchhhhhhhcC----HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhcCCcCcEEE
Confidence            999999999999999999999999998754322    3356777889999999999999999999999999999999999


Q ss_pred             eCCCcee
Q 024994          241 VDGGVTV  247 (259)
Q Consensus       241 ~dgG~~~  247 (259)
                      +|||++.
T Consensus       225 vDGG~s~  231 (234)
T d1o5ia_         225 VDGGLSK  231 (234)
T ss_dssp             ESTTCCC
T ss_pred             ECccccc
Confidence            9999863

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=8.5e-53  Score=346.31  Aligned_cols=241  Identities=24%  Similarity=0.295  Sum_probs=209.6

Q ss_pred             CEEEEEcCcc--hHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTR--GIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~--giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||+|  |||+++|++|+++|++|++++|+++..+...+. .....+..++++|++|+++++++++++.+++ ++
T Consensus         9 K~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~   86 (256)
T d1ulua_           9 KKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKL-AEALGGALLFRADVTQDEELDALFAGVKEAF-GG   86 (256)
T ss_dssp             CEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHH-HHHTTCCEEEECCTTCHHHHHHHHHHHHHHH-SS
T ss_pred             CEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHh-hhccCcccccccccCCHHHHHHHHHHHHHhc-CC
Confidence            7999999987  999999999999999999999997766554433 3344567889999999999999999999999 79


Q ss_pred             ccEEEEcCCCCCC----CCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhH
Q 024994           79 LNILINNAAIAFV----KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYK  154 (259)
Q Consensus        79 id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  154 (259)
                      +|++|||||....    .++.+.+.++|++.+++|+.+++.+++++.|+|.+  .|+||++||..+..+.++..+|++||
T Consensus        87 iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~--~G~Iv~isS~~~~~~~~~~~~Y~asK  164 (256)
T d1ulua_          87 LDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYASEKVVPKYNVMAIAK  164 (256)
T ss_dssp             EEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEEECGGGTSBCTTCHHHHHHH
T ss_pred             ceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhcc--CCEEEEEeehHhcCCCCCchHHHHHH
Confidence            9999999998642    35677889999999999999999999999999865  48999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 024994          155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYI  234 (259)
Q Consensus       155 ~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~  234 (259)
                      +|+++|+|++|.|++++|||||+|+||+++|++......   .+...+.+....|++|+++|+|++++++||+|++++|+
T Consensus       165 aal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~---~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~i  241 (256)
T d1ulua_         165 AALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPG---FTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPLASGI  241 (256)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECCC-------------CHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhh---hHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCc
Confidence            999999999999999999999999999999998765433   34477788889999999999999999999999999999


Q ss_pred             cccEEEeCCCceee
Q 024994          235 TGQIICVDGGVTVT  248 (259)
Q Consensus       235 ~G~~l~~dgG~~~~  248 (259)
                      |||.|.+|||+++.
T Consensus       242 tG~~i~VDGG~~~~  255 (256)
T d1ulua_         242 TGEVVYVDAGYHIM  255 (256)
T ss_dssp             CSCEEEESTTGGGB
T ss_pred             cCCeEEECcCEeCc
Confidence            99999999999874

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-52  Score=342.55  Aligned_cols=238  Identities=23%  Similarity=0.291  Sum_probs=212.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++...++.+.  +.++.++++|++|+++++++++++.+++ ++
T Consensus         4 KvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-G~   82 (254)
T d2gdza1           4 KVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF-GR   82 (254)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH-SC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc-CC
Confidence            89999999999999999999999999999999999999988888654  4579999999999999999999999999 79


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC---CCEEEEecCCCccCCCCCChhhhhhHH
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG---NGSIVFISSVGGVRGIPSVSLYGAYKG  155 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~~~ii~isS~~~~~~~~~~~~Y~~sK~  155 (259)
                      +|+||||||....        ++|++++++|+.+++.+++.++|+|.+++   .|+||++||..+..|.+...+|++||+
T Consensus        83 iDilVnnAg~~~~--------~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKa  154 (254)
T d2gdza1          83 LDILVNNAGVNNE--------KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKH  154 (254)
T ss_dssp             CCEEEECCCCCCS--------SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             cCeeccccccccc--------ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccchHHHHH
Confidence            9999999998533        45899999999999999999999997653   488999999999999999999999999


Q ss_pred             HHHHHHHH--HHHHHccCCceEEEEeCCceeCCCCCCCcCCC---CchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 024994          156 AMNQLTKN--LACEWAKDNIRTNTVAPWVIKTSMIKPFEEGP---EGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPA  230 (259)
Q Consensus       156 a~~~~~~~--~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  230 (259)
                      |+.+|+|+  ++.|++++|||||+|+||+++|++........   ......+.+....|++|+++|+|+|++++||++++
T Consensus       155 al~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~  234 (254)
T d2gdza1         155 GIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIEDD  234 (254)
T ss_dssp             HHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHHHCT
T ss_pred             HHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHcCC
Confidence            99999997  68899999999999999999999976553321   11234566777889999999999999999999864


Q ss_pred             CCCccccEEEeCCCceeee
Q 024994          231 ASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       231 ~~~~~G~~l~~dgG~~~~~  249 (259)
                        ++||+.|.||||.++..
T Consensus       235 --~itG~~i~VdGG~~~~~  251 (254)
T d2gdza1         235 --ALNGAIMKITTSKGIHF  251 (254)
T ss_dssp             --TCSSCEEEEETTTEEEE
T ss_pred             --CCCCCEEEECCCCeeec
Confidence              59999999999998765

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=2.8e-51  Score=339.96  Aligned_cols=244  Identities=27%  Similarity=0.424  Sum_probs=216.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCC-hhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRN-QIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||++|||+++|++|+++|++|++++|+ ++.++++.+++.+.+.++.++++|++|+++++++++++.+.+ +++
T Consensus        19 K~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~i   97 (272)
T d1g0oa_          19 KVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF-GKL   97 (272)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-SCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHh-CCC
Confidence            899999999999999999999999999999876 566777888888888899999999999999999999999999 799


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCcc-CCCCCChhhhhhHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV-RGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~-~~~~~~~~Y~~sK~a~~  158 (259)
                      |++|||+|.....++.+.+.++|++++++|+.+++.++++++|+|.++  +++++++|..+. .+.+.+..|+++|+|++
T Consensus        98 dilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~--g~~i~i~s~~~~~~~~~~~~~Y~asKaal~  175 (272)
T d1g0oa_          98 DIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG--GRLILMGSITGQAKAVPKHAVYSGSKGAIE  175 (272)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT--CEEEEECCGGGTCSSCSSCHHHHHHHHHHH
T ss_pred             CccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccc--cccccccccccccccccchhhHHHHHHHHH
Confidence            999999999988899999999999999999999999999999999754  788999887654 45677889999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcC-------CCCc-hHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE-------GPEG-SEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPA  230 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~-------~~~~-~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  230 (259)
                      +|+|+++.|++++|||||+|+||+++|++......       .... ..........+|++|+++|+||+++++||++++
T Consensus       176 ~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~~v~fL~s~~  255 (272)
T d1g0oa_         176 TFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLASND  255 (272)
T ss_dssp             HHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCCCCcCHHHHHHHHHHHhCch
Confidence            99999999999999999999999999998643211       1111 122234567899999999999999999999999


Q ss_pred             CCCccccEEEeCCCcee
Q 024994          231 ASYITGQIICVDGGVTV  247 (259)
Q Consensus       231 ~~~~~G~~l~~dgG~~~  247 (259)
                      +.|+||+.|.+|||..|
T Consensus       256 s~~itG~~i~vDGG~~m  272 (272)
T d1g0oa_         256 GGWVTGKVIGIDGGACM  272 (272)
T ss_dssp             GTTCCSCEEEESTTCCC
T ss_pred             hcCccCceEeECCCCCC
Confidence            99999999999999865

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.2e-52  Score=339.46  Aligned_cols=237  Identities=24%  Similarity=0.368  Sum_probs=210.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||+++|+.|+++|++|++++|++++++++.+     ...+....+|+.+.+.++...+    .+ +++|
T Consensus         7 K~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~-----~~~~~~~~~d~~~~~~~~~~~~----~~-~~id   76 (245)
T d2ag5a1           7 KVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK-----YPGIQTRVLDVTKKKQIDQFAN----EV-ERLD   76 (245)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG-----STTEEEEECCTTCHHHHHHHHH----HC-SCCS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-----ccCCceeeeecccccccccccc----cc-ccce
Confidence            799999999999999999999999999999999987765432     3367788899988776666554    44 6899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCcc-CCCCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV-RGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~-~~~~~~~~Y~~sK~a~~~  159 (259)
                      +||||||.....++.+.+.++|++.+++|+.+++.+++.+.|+|.+++.|+||+++|..+. .+.+...+|+++|+|+++
T Consensus        77 ~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~~Y~~sKaal~~  156 (245)
T d2ag5a1          77 VLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIG  156 (245)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHHHHHH
T ss_pred             eEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCccchhHHHHHHHHHHH
Confidence            9999999998889999999999999999999999999999999999889999999998774 578889999999999999


Q ss_pred             HHHHHHHHHccCCceEEEEeCCceeCCCCCCCcC-CCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 024994          160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE-GPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI  238 (259)
Q Consensus       160 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~  238 (259)
                      |+|++|.|++++|||||+|+||+++||+...... ........+.+...+|++|+++|+|+++++.||+++++.|+||+.
T Consensus       157 l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedva~~v~fL~s~~s~~iTG~~  236 (245)
T d2ag5a1         157 LTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVTGNP  236 (245)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhCCCcCce
Confidence            9999999999999999999999999998764332 223344667778899999999999999999999999999999999


Q ss_pred             EEeCCCcee
Q 024994          239 ICVDGGVTV  247 (259)
Q Consensus       239 l~~dgG~~~  247 (259)
                      |.+|||+++
T Consensus       237 i~VDGG~sl  245 (245)
T d2ag5a1         237 VIIDGGWSL  245 (245)
T ss_dssp             EEECTTGGG
T ss_pred             EEeCCCcCC
Confidence            999999975

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-50  Score=332.44  Aligned_cols=238  Identities=25%  Similarity=0.311  Sum_probs=212.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG--FKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||++|||+++|+.|+++|++|++++|++++++++.+++++.+  .++.++++|++++++++++++++.+++ ++
T Consensus        11 Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~-g~   89 (257)
T d1xg5a_          11 RLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH-SG   89 (257)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH-CC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhc-CC
Confidence            799999999999999999999999999999999999999999998764  578999999999999999999999999 79


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC--CCEEEEecCCCccCC--CCCChhhhhhH
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG--NGSIVFISSVGGVRG--IPSVSLYGAYK  154 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~ii~isS~~~~~~--~~~~~~Y~~sK  154 (259)
                      +|+||||||....+++.+.+.++|++.+++|+.+++++++.++|.|.+++  .|+||++||.++...  .+....|+++|
T Consensus        90 iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~~~~~Y~~sK  169 (257)
T d1xg5a_          90 VDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATK  169 (257)
T ss_dssp             CSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHHHHHH
T ss_pred             CCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCcccHHHHHHH
Confidence            99999999999899999999999999999999999999999999998754  689999999988754  45567799999


Q ss_pred             HHHHHHHHHHHHHH--ccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCC
Q 024994          155 GAMNQLTKNLACEW--AKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAAS  232 (259)
Q Consensus       155 ~a~~~~~~~~a~e~--~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  232 (259)
                      +++.+|+|+++.|+  +++|||||+|+||.+.|++.......     ..+......|.+|+++|+|++++++||+++.++
T Consensus       170 aal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~-----~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~a~  244 (257)
T d1xg5a_         170 YAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDK-----DPEKAAATYEQMKCLKPEDVAEAVIYVLSTPAH  244 (257)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTT-----CHHHHHHHHC---CBCHHHHHHHHHHHHHSCTT
T ss_pred             HHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChh-----hHHHHHhcCCCCCCcCHHHHHHHHHHHhCChhc
Confidence            99999999999998  77899999999999999987654332     235566778999999999999999999999999


Q ss_pred             CccccEEEeCCC
Q 024994          233 YITGQIICVDGG  244 (259)
Q Consensus       233 ~~~G~~l~~dgG  244 (259)
                      ++|||++..++|
T Consensus       245 ~itG~i~i~~~g  256 (257)
T d1xg5a_         245 IQIGDIQMRPTG  256 (257)
T ss_dssp             EEEEEEEEEETT
T ss_pred             CeECCEEEEeCC
Confidence            999997555544

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=1.3e-49  Score=333.64  Aligned_cols=247  Identities=27%  Similarity=0.401  Sum_probs=219.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++... +.++.++++|+++.++++++++.+.+.+ +++
T Consensus        26 K~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~i  104 (294)
T d1w6ua_          26 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVA-GHP  104 (294)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHT-CSC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhc-ccc
Confidence            89999999999999999999999999999999999998888877643 6688999999999999999999999999 799


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHh-CCCCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKA-SGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      |++|||||.....++.+.+.+++++++.+|+.+.+.+.+...+.+.. ...+.+++++|..+..+.+...+|++||+|++
T Consensus       105 DilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~~~YsasKaal~  184 (294)
T d1w6ua_         105 NIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVE  184 (294)
T ss_dssp             SEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHHHHHHHH
T ss_pred             chhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccccchHHHHHHHHH
Confidence            99999999988888999999999999999999999998887766654 45678888999888999999999999999999


Q ss_pred             HHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccE
Q 024994          159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQI  238 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~  238 (259)
                      +|+|++|.|++++|||||+|+||+++|++.......  .+...+.....+|++|+++|+|++++++||+++++.|+||++
T Consensus       185 ~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~--~~~~~~~~~~~~pl~R~~~pediA~~v~fL~sd~s~~itG~~  262 (294)
T d1w6ua_         185 AMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDP--TGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWINGAV  262 (294)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECCBCC------CCT--TSHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTTCCSCE
T ss_pred             HHHHHHHHHHhHhCeEEEEEccCccccchhhhccCC--cHHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCchhcCCCCcE
Confidence            999999999999999999999999999998665432  234677888899999999999999999999999999999999


Q ss_pred             EEeCCCceeeec
Q 024994          239 ICVDGGVTVTVN  250 (259)
Q Consensus       239 l~~dgG~~~~~~  250 (259)
                      |.+|||+++..+
T Consensus       263 i~vDGG~~l~~~  274 (294)
T d1w6ua_         263 IKFDGGEEVLIS  274 (294)
T ss_dssp             EEESTTHHHHHH
T ss_pred             EEECCChhheeC
Confidence            999999875443

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=4.2e-50  Score=336.56  Aligned_cols=231  Identities=27%  Similarity=0.365  Sum_probs=204.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCC---------hhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRN---------QIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETV   71 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~---------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   71 (259)
                      |++|||||++|||+++|++|+++|++|++++|+         .+.+++..+++....   ....+|++|.++++++++++
T Consensus         8 KvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~v~~~   84 (302)
T d1gz6a_           8 RVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG---GKAVANYDSVEAGEKLVKTA   84 (302)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTT---CEEEEECCCGGGHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcc---cccccccchHHHHHHHHHHH
Confidence            799999999999999999999999999998654         455666777766533   44578999999999999999


Q ss_pred             HHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhh
Q 024994           72 TSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYG  151 (259)
Q Consensus        72 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~  151 (259)
                      .+++ +++|+||||||+...+++.+.+.++|++++++|+.+++.++|+++|+|++++.|+||++||..+..+.++...|+
T Consensus        85 ~~~~-G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~~~~~Y~  163 (302)
T d1gz6a_          85 LDTF-GRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYS  163 (302)
T ss_dssp             HHHT-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHH
T ss_pred             HHHc-CCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCCCcHHHH
Confidence            9999 799999999999988999999999999999999999999999999999998889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCC
Q 024994          152 AYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAA  231 (259)
Q Consensus       152 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  231 (259)
                      +||+|+.+|+|+++.|++++|||||+|+||++.|++....+.     ..          .+..+|+|++++++||+++.+
T Consensus       164 asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~~~-----~~----------~~~~~PedvA~~v~fL~S~~a  228 (302)
T d1gz6a_         164 AAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVMPE-----DL----------VEALKPEYVAPLVLWLCHESC  228 (302)
T ss_dssp             HHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGSCH-----HH----------HHHSCGGGTHHHHHHHTSTTC
T ss_pred             HHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcCcH-----hh----------HhcCCHHHHHHHHHHHcCCCc
Confidence            999999999999999999999999999999998876543321     11          133479999999999999765


Q ss_pred             CCccccEEEeCCCceeeecc
Q 024994          232 SYITGQIICVDGGVTVTVNV  251 (259)
Q Consensus       232 ~~~~G~~l~~dgG~~~~~~~  251 (259)
                       ++||++|.+|||+.-...|
T Consensus       229 -~itG~~i~vdGG~~~~~~~  247 (302)
T d1gz6a_         229 -EENGGLFEVGAGWIGKLRW  247 (302)
T ss_dssp             -CCCSCEEEEETTEEEEEEE
T ss_pred             -CCCCcEEEeCCCceeEEEE
Confidence             7999999999997665544

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.3e-48  Score=321.62  Aligned_cols=238  Identities=22%  Similarity=0.231  Sum_probs=211.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHH---CCCEEEEeeCChhHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHc
Q 024994            1 MTALVTGGTRGIGHATVEELAR---FGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTSIF   75 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~---~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (259)
                      |++||||||+|||+++|++|++   +|++|++++|+.++++++.+++...  +.++.++++|++++++++++++.+.+..
T Consensus         7 KvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~~~   86 (259)
T d1oaaa_           7 AVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELP   86 (259)
T ss_dssp             EEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHhh
Confidence            7899999999999999999996   7999999999999999999988754  4579999999999999999999987742


Q ss_pred             ---CCCccEEEEcCCCCC---CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC--CCEEEEecCCCccCCCCCC
Q 024994           76 ---QGKLNILINNAAIAF---VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG--NGSIVFISSVGGVRGIPSV  147 (259)
Q Consensus        76 ---~~~id~vi~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~ii~isS~~~~~~~~~~  147 (259)
                         .+.+|++|||||...   .+++.+.+.++|++++++|+.+++++++.++|+|.+++  .++||++||..+..|.+++
T Consensus        87 ~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~~~~~  166 (259)
T d1oaaa_          87 RPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGW  166 (259)
T ss_dssp             CCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCCTTC
T ss_pred             hhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCCCccc
Confidence               247999999999753   35678899999999999999999999999999998765  5799999999999999999


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHh
Q 024994          148 SLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLC  227 (259)
Q Consensus       148 ~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  227 (259)
                      .+|++||+|+++|+|+|+.|  ++|||||+|+||+|.|++..........+...+.+....|.+++.+|+|+++.++|++
T Consensus       167 ~~Y~asKaal~~lt~~la~e--~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~evA~~i~~ll  244 (259)
T d1oaaa_         167 GLYCAGKAARDMLYQVLAAE--EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKLLGLL  244 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH--CTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhC--CCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh
Confidence            99999999999999999998  6799999999999999987655443344456677777788999999999999999999


Q ss_pred             CCCCCCccccEEEe
Q 024994          228 LPAASYITGQIICV  241 (259)
Q Consensus       228 ~~~~~~~~G~~l~~  241 (259)
                      ++ .+|+||++|++
T Consensus       245 ~~-~s~~TG~~idv  257 (259)
T d1oaaa_         245 QK-DTFQSGAHVDF  257 (259)
T ss_dssp             HH-CCSCTTEEEET
T ss_pred             hh-ccCCCCCeEEe
Confidence            86 46999999876

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-47  Score=309.85  Aligned_cols=214  Identities=26%  Similarity=0.329  Sum_probs=196.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++||||||+|||+++|++|+++|++|++++|+.++++++.+++.+.+.+++++.||++|.++++++++++.+++ +++|
T Consensus         8 kv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~-g~id   86 (244)
T d1yb1a_           8 EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI-GDVS   86 (244)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT-CCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHc-CCCc
Confidence            799999999999999999999999999999999999999999999888899999999999999999999999999 7899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL  160 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (259)
                      ++|||||.....++.+.+.++|++++++|+.++++++++++|.|.+++.|+||++||..+..+.|++++|++||+|+.+|
T Consensus        87 ilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~~  166 (244)
T d1yb1a_          87 ILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGF  166 (244)
T ss_dssp             EEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHHHHHHHH
T ss_pred             eeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCCcHHHHHHHHHHHHH
Confidence            99999999988889999999999999999999999999999999999899999999999999999999999999999999


Q ss_pred             HHHHHHHHcc---CCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCC
Q 024994          161 TKNLACEWAK---DNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPA  230 (259)
Q Consensus       161 ~~~~a~e~~~---~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  230 (259)
                      +++|+.|+++   +||+||+|+||+|+|++.+...               .+..+..+|+++++.+...+..+
T Consensus       167 ~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~~---------------~~~~~~~~pe~va~~i~~~~~~~  224 (244)
T d1yb1a_         167 HKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPS---------------TSLGPTLEPEEVVNRLMHGILTE  224 (244)
T ss_dssp             HHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCTH---------------HHHCCCCCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCcC---------------ccccCCCCHHHHHHHHHHHHhcC
Confidence            9999999876   5899999999999999875421               12235668999999988766543

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=3.1e-46  Score=311.33  Aligned_cols=239  Identities=24%  Similarity=0.307  Sum_probs=199.2

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeC-ChhHHHHHHHHHHhc-CCcEEEE-----------------EecCCCHH
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSR-NQIELDARLHEWKNK-GFKVTGS-----------------VCDLSSRE   62 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~-~~~~~~~-----------------~~D~~~~~   62 (259)
                      ++|||||++|||+++|++|+++|++|+++++ +.+..+++.+++... +.....+                 .+|+++.+
T Consensus         4 VAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~~   83 (284)
T d1e7wa_           4 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFT   83 (284)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCHH
Confidence            6899999999999999999999999999876 455666777777643 3344444                 45699999


Q ss_pred             HHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCCCCHHHHH--------------HHHHHhhHhHHHHHHHHHHHhH---
Q 024994           63 QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMS--------------TVSSTNFESVFHLSQLAHPLFK---  125 (259)
Q Consensus        63 ~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~--------------~~~~~n~~~~~~~~~~~~~~~~---  125 (259)
                      +++++++++.+++ +++|+||||||...+.++.+.+.++|+              .+|.+|+.+++.+.+.+.+.+.   
T Consensus        84 ~v~~~~~~~~~~~-G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~  162 (284)
T d1e7wa_          84 RCAELVAACYTHW-GRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTP  162 (284)
T ss_dssp             HHHHHHHHHHHHH-SCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHHh-CCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhH
Confidence            9999999999999 799999999999888877776666554              4789999999999999887653   


Q ss_pred             ---hCCCCEEEEecCCCccCCCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHH
Q 024994          126 ---ASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLD  202 (259)
Q Consensus       126 ---~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~  202 (259)
                         +...++|++++|.....+.++..+|++||+|+.+|+|+++.|++++|||||+|+||++.+...       ..+...+
T Consensus       163 ~~~~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~-------~~~~~~~  235 (284)
T d1e7wa_         163 AKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDD-------MPPAVWE  235 (284)
T ss_dssp             GGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGG-------SCHHHHH
T ss_pred             HHhcCCCCcccccccccccCCccceeeeccccccchhhhHHHHHHhCCcccccccccccccccccc-------CCHHHHH
Confidence               334689999999999999999999999999999999999999999999999999998544321       1233667


Q ss_pred             hhhhcCCC-CCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCceee
Q 024994          203 GIARQTPI-GRAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVT  248 (259)
Q Consensus       203 ~~~~~~~~-~~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~  248 (259)
                      .+....|+ +|+++|+|++++++||++++++|+||++|.+|||++++
T Consensus       236 ~~~~~~pl~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl~  282 (284)
T d1e7wa_         236 GHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  282 (284)
T ss_dssp             HHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhcc
Confidence            77777775 99999999999999999999999999999999999875

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=2.7e-47  Score=312.37  Aligned_cols=236  Identities=18%  Similarity=0.198  Sum_probs=197.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHH-hcCCcEEEEEecCC-CHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK-NKGFKVTGSVCDLS-SREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~~~~   78 (259)
                      |+||||||++|||+++|++|+++|++|++++|+.++.+...+... ..+.++.++.+|++ +.++++++++++.+++ ++
T Consensus         6 K~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~-g~   84 (254)
T d1sbya1           6 KNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL-KT   84 (254)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH-SC
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHc-CC
Confidence            899999999999999999999999999999888777655543333 33558999999998 7788999999999999 79


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC---CCCEEEEecCCCccCCCCCChhhhhhHH
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS---GNGSIVFISSVGGVRGIPSVSLYGAYKG  155 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~~~ii~isS~~~~~~~~~~~~Y~~sK~  155 (259)
                      +|+||||||..        +.++|++++++|+.+++.++++++|.|.++   ..++||+++|..+..+.+++.+|++||+
T Consensus        85 iDilvnnAG~~--------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKa  156 (254)
T d1sbya1          85 VDILINGAGIL--------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKA  156 (254)
T ss_dssp             CCEEEECCCCC--------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHHHHHH
T ss_pred             CCEEEeCCCCC--------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCCHHHHHHHH
Confidence            99999999963        457799999999999999999999999765   3589999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCcc
Q 024994          156 AMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYIT  235 (259)
Q Consensus       156 a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~  235 (259)
                      |+.+|+++|+.|+.++|||||+|+||+|+|++.+........   ...........+..+||++++.+++.++.   +.|
T Consensus       157 al~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~---~~~~~~~~~~~~~~~~e~va~~~~~~~~~---~~t  230 (254)
T d1sbya1         157 AVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDV---EPRVAELLLSHPTQTSEQCGQNFVKAIEA---NKN  230 (254)
T ss_dssp             HHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGS---CTTHHHHHTTSCCEEHHHHHHHHHHHHHH---CCT
T ss_pred             HHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhH---HHHHHhccccCCCCCHHHHHHHHHHhhhC---CCC
Confidence            999999999999999999999999999999987655332221   12222233344566899999988877753   359


Q ss_pred             ccEEEeCCCceeeecc
Q 024994          236 GQIICVDGGVTVTVNV  251 (259)
Q Consensus       236 G~~l~~dgG~~~~~~~  251 (259)
                      |+++.+|||+...+.|
T Consensus       231 G~vi~vdgG~l~~~~~  246 (254)
T d1sbya1         231 GAIWKLDLGTLEAIEW  246 (254)
T ss_dssp             TCEEEEETTEEEECCC
T ss_pred             CCEEEECCCEeCccCC
Confidence            9999999997655544

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.9e-46  Score=305.00  Aligned_cols=230  Identities=26%  Similarity=0.378  Sum_probs=200.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||+++|++|+++|++|++++|+.+.+++..+++   +.+.....+|+.+.+.++....++...+ ..+|
T Consensus         6 KvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~   81 (248)
T d2o23a1           6 LVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL---GNNCVFAPADVTSEKDVQTALALAKGKF-GRVD   81 (248)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCCccccccccccccccccccccccccc-cccc
Confidence            79999999999999999999999999999999999998887776   4478888999999999999999999888 6899


Q ss_pred             EEEEcCCCCCC------CCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC------CCCEEEEecCCCccCCCCCCh
Q 024994           81 ILINNAAIAFV------KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS------GNGSIVFISSVGGVRGIPSVS  148 (259)
Q Consensus        81 ~vi~~ag~~~~------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~~~~ii~isS~~~~~~~~~~~  148 (259)
                      .+++++++...      .+..+.+.++|++++++|+.+++++++++.|+|...      +.|+||++||..+..+.+++.
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~  161 (248)
T d2o23a1          82 VAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQA  161 (248)
T ss_dssp             EEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCH
T ss_pred             ccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCCCCch
Confidence            99999886543      345667899999999999999999999999998653      468999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCC-CCCCCHHHHHHHHHHHh
Q 024994          149 LYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPI-GRAGEPDEVSSLVAFLC  227 (259)
Q Consensus       149 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~  227 (259)
                      +|++||+|+++|+|+++.|++++|||||+|+||+++|++....++.     ..+.+....|+ +|+++|+|||++++||+
T Consensus       162 ~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~~-----~~~~~~~~~pl~~R~g~peevA~~v~fL~  236 (248)
T d2o23a1         162 AYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEK-----VCNFLASQVPFPSRLGDPAEYAHLVQAII  236 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC---------------CHHHHTCSSSCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCHH-----HHHHHHhcCCCCCCCcCHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999998765432     44556667776 99999999999999999


Q ss_pred             CCCCCCccccEEEe
Q 024994          228 LPAASYITGQIICV  241 (259)
Q Consensus       228 ~~~~~~~~G~~l~~  241 (259)
                      +  ++|+|||+|.|
T Consensus       237 s--~~~itGq~I~v  248 (248)
T d2o23a1         237 E--NPFLNGEVIRL  248 (248)
T ss_dssp             H--CTTCCSCEEEE
T ss_pred             h--CCCCCceEeEC
Confidence            6  57999999975

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=8.6e-47  Score=310.63  Aligned_cols=241  Identities=19%  Similarity=0.287  Sum_probs=212.7

Q ss_pred             CEEEEEcCcc--hHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTR--GIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~--giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||+|  |||+++|+.|+++|++|++++|+++..+.. +++............|+++..++...++++.+.+ ++
T Consensus         6 K~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~   83 (258)
T d1qsga_           6 KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRV-EEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW-PK   83 (258)
T ss_dssp             CEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHH-HHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC-SS
T ss_pred             CEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHHHhhcCCcceeecccchHHHHHHHHHHhhhcc-cc
Confidence            8999999999  899999999999999999999997655544 4444445567788999999999999999999998 79


Q ss_pred             ccEEEEcCCCCCCCCC-----CCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhh
Q 024994           79 LNILINNAAIAFVKPT-----VDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAY  153 (259)
Q Consensus        79 id~vi~~ag~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~s  153 (259)
                      +|++|||++.......     .....+.|...+++|+.+.+.+.+.+.|.|.+  ++.|+++||..+..+.|....|++|
T Consensus        84 ~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Ii~iss~~~~~~~~~~~~Y~~s  161 (258)
T d1qsga_          84 FDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNYNVMGLA  161 (258)
T ss_dssp             EEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTTTHHHHH
T ss_pred             cceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccC--CcEEEEecchhhccCCCCcHHHHHH
Confidence            9999999998654433     34567789999999999999999999998854  4789999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCC
Q 024994          154 KGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASY  233 (259)
Q Consensus       154 K~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  233 (259)
                      |+|+++|+|+++.|++++|||||+|+||+|+|++.....   ......+......|++|+++|||+++++.||++++++|
T Consensus       162 Kaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~---~~~~~~~~~~~~~pl~R~~~peeia~~v~fL~s~~s~~  238 (258)
T d1qsga_         162 KASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIK---DFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAG  238 (258)
T ss_dssp             HHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGST---THHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGGTT
T ss_pred             HHHHHHHHHHHHHHhCccCceeecccccccccccccccc---hhhhHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence            999999999999999999999999999999999876542   33446777788999999999999999999999999999


Q ss_pred             ccccEEEeCCCceee
Q 024994          234 ITGQIICVDGGVTVT  248 (259)
Q Consensus       234 ~~G~~l~~dgG~~~~  248 (259)
                      +||+.|.+|||++++
T Consensus       239 itG~~i~vDGG~~i~  253 (258)
T d1qsga_         239 ISGEVVHVDGGFSIA  253 (258)
T ss_dssp             CCSCEEEESTTGGGB
T ss_pred             ccCceEEECcCHHHh
Confidence            999999999998875

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=2.6e-46  Score=317.79  Aligned_cols=245  Identities=18%  Similarity=0.188  Sum_probs=204.1

Q ss_pred             CEEEEEc--CcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhc------------CCcEEEEE-----------
Q 024994            1 MTALVTG--GTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK------------GFKVTGSV-----------   55 (259)
Q Consensus         1 k~~lItG--~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------------~~~~~~~~-----------   55 (259)
                      |++||||  +++|||+++|+.|+++|++|++++++..............            ........           
T Consensus         3 kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (329)
T d1uh5a_           3 DICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTANDI   82 (329)
T ss_dssp             CEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGGC
T ss_pred             cEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhccc
Confidence            7999999  6689999999999999999999998877654433322211            01112222           


Q ss_pred             ---------ecCCCHHHHHHHHHHHHHHcCCCccEEEEcCCCCCC--CCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHh
Q 024994           56 ---------CDLSSREQREKLIETVTSIFQGKLNILINNAAIAFV--KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLF  124 (259)
Q Consensus        56 ---------~D~~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~  124 (259)
                               +|+++.++++++++++.+.+ +++|++|||+|....  +++.+.+.++|++++++|+++++.++|+++|+|
T Consensus        83 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m  161 (329)
T d1uh5a_          83 DEETKNNKRYNMLQNYTIEDVANLIHQKY-GKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM  161 (329)
T ss_dssp             CHHHHTSHHHHTCCCCSHHHHHHHHHHHH-CCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             chhhhhhhhhhhhhHHHHHHHHHHHHHHh-CCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhc
Confidence                     36778888999999999999 799999999997653  478889999999999999999999999999999


Q ss_pred             HhCCCCEEEEecCCCccCCCCC-ChhhhhhHHHHHHHHHHHHHHHcc-CCceEEEEeCCceeCCCCCCC-----------
Q 024994          125 KASGNGSIVFISSVGGVRGIPS-VSLYGAYKGAMNQLTKNLACEWAK-DNIRTNTVAPWVIKTSMIKPF-----------  191 (259)
Q Consensus       125 ~~~~~~~ii~isS~~~~~~~~~-~~~Y~~sK~a~~~~~~~~a~e~~~-~gi~v~~v~pg~v~t~~~~~~-----------  191 (259)
                      .+  .|+||++||.++..+.|+ ...|+++|+++++|+|+++.||++ +|||||+|+||+|+|+..+..           
T Consensus       162 ~~--~GsIv~iss~~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~~~i~g~~~~~~~~~  239 (329)
T d1uh5a_         162 KP--QSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNT  239 (329)
T ss_dssp             EE--EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTGGGCC----------
T ss_pred             cc--ccccccceeehhcccccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhhhcccchhhhhhhhh
Confidence            64  589999999999988887 567999999999999999999987 599999999999999543221           


Q ss_pred             -----------------------------cCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEEeC
Q 024994          192 -----------------------------EEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD  242 (259)
Q Consensus       192 -----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~~d  242 (259)
                                                   ......+...+.+....|++|+++|+||+++++||+|+.++|+|||+|.+|
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~~~pedvA~~v~fLaSd~s~~iTGq~i~VD  319 (329)
T d1uh5a_         240 NQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAITGQTIYVD  319 (329)
T ss_dssp             --------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             hhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCchhCCccCCeEEEC
Confidence                                         112233456778888999999999999999999999999999999999999


Q ss_pred             CCceee
Q 024994          243 GGVTVT  248 (259)
Q Consensus       243 gG~~~~  248 (259)
                      ||+++.
T Consensus       320 GG~~~~  325 (329)
T d1uh5a_         320 NGLNIM  325 (329)
T ss_dssp             TTGGGC
T ss_pred             CCcccc
Confidence            998764

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-46  Score=312.70  Aligned_cols=235  Identities=21%  Similarity=0.256  Sum_probs=190.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEE---eeCChhH---HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHT---CSRNQIE---LDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSI   74 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~---~~r~~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   74 (259)
                      |+|||||||+|||+++|++|+++|++|+.   +.|+.+.   +++..+++...+.++.++++|++|.++++++++++.+ 
T Consensus         3 kVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~-   81 (285)
T d1jtva_           3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE-   81 (285)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT-
T ss_pred             CEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc-
Confidence            57899999999999999999999987544   4555544   3444445555577899999999999999999988743 


Q ss_pred             cCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhH
Q 024994           75 FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYK  154 (259)
Q Consensus        75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  154 (259)
                        +.+|+||||+|....+++.+.+.++|++++++|+.|+++++++++|+|.+++.|+||++||.++..+.|....|++||
T Consensus        82 --g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~~~Y~asK  159 (285)
T d1jtva_          82 --GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASK  159 (285)
T ss_dssp             --SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHHHH
T ss_pred             --cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCchHHHHHH
Confidence              689999999999988899999999999999999999999999999999998889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCC------chHHHHhh------hhcCCCCCCCCHHHHHHH
Q 024994          155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPE------GSEFLDGI------ARQTPIGRAGEPDEVSSL  222 (259)
Q Consensus       155 ~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~------~~~~~~~~------~~~~~~~~~~~~~~va~~  222 (259)
                      +|+.+|+++++.|++++|||||+|+||+++|++.......+.      .....+.+      ....+.++..+|+|||++
T Consensus       160 aal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PeeVA~~  239 (285)
T d1jtva_         160 FALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEV  239 (285)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccCCCHHHHHHH
Confidence            999999999999999999999999999999999876543211      11111111      123345678899999999


Q ss_pred             HHHHhCCCC---CCccccE
Q 024994          223 VAFLCLPAA---SYITGQI  238 (259)
Q Consensus       223 ~~~l~~~~~---~~~~G~~  238 (259)
                      ++++++..+   +|++|+.
T Consensus       240 v~~~~~~~~p~~ry~~g~~  258 (285)
T d1jtva_         240 FLTALRAPKPTLRYFTTER  258 (285)
T ss_dssp             HHHHHHCSSCCSEEESCST
T ss_pred             HHHHHhCCCCCeEEecHHH
Confidence            999997553   5677753

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=6.7e-45  Score=296.17  Aligned_cols=226  Identities=25%  Similarity=0.308  Sum_probs=194.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||+++|++|+++|++|++++|+++.            .+....++|+++......+.....+..  ..+
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~------------~~~~~~~~d~~~~~~~~~~~~~~~~~~--~~~   67 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRREG------------EDLIYVEGDVTREEDVRRAVARAQEEA--PLF   67 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS------------SSSEEEECCTTCHHHHHHHHHHHHHHS--CEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc------------ccceEeeccccchhhhHHHHHhhhccc--ccc
Confidence            899999999999999999999999999999998653            256678999999999999988887765  566


Q ss_pred             EEEEcCCCCCC----CCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHh------HhCCCCEEEEecCCCccCCCCCChhh
Q 024994           81 ILINNAAIAFV----KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLF------KASGNGSIVFISSVGGVRGIPSVSLY  150 (259)
Q Consensus        81 ~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~------~~~~~~~ii~isS~~~~~~~~~~~~Y  150 (259)
                      .++++++....    ......+.+.|++++++|+.+++.+++.+.+.+      .+++.|+||++||..+..+.++..+|
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~Y  147 (241)
T d1uaya_          68 AVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAY  147 (241)
T ss_dssp             EEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHH
T ss_pred             chhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCchhh
Confidence            77777765432    344567789999999999999999999999884      44567999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCC-CCCCCCHHHHHHHHHHHhCC
Q 024994          151 GAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTP-IGRAGEPDEVSSLVAFLCLP  229 (259)
Q Consensus       151 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~va~~~~~l~~~  229 (259)
                      +++|+|+++|+|+++.|++++|||||+|+||+++|++......     ...+......| .+|+++|+|++++++||++ 
T Consensus       148 ~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~-----~~~~~~~~~~~~~~R~g~pedvA~~v~fL~s-  221 (241)
T d1uaya_         148 AASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPE-----KAKASLAAQVPFPPRLGRPEEYAALVLHILE-  221 (241)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCH-----HHHHHHHTTCCSSCSCCCHHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhhh-----hHHHHHHhcCCCCCCCcCHHHHHHHHHHHHh-
Confidence            9999999999999999999999999999999999998765422     23344444555 5999999999999999997 


Q ss_pred             CCCCccccEEEeCCCcee
Q 024994          230 AASYITGQIICVDGGVTV  247 (259)
Q Consensus       230 ~~~~~~G~~l~~dgG~~~  247 (259)
                       ++|+|||+|.+|||.+|
T Consensus       222 -~~~iTG~~i~VDGG~~m  238 (241)
T d1uaya_         222 -NPMLNGEVVRLDGALRM  238 (241)
T ss_dssp             -CTTCCSCEEEESTTCCC
T ss_pred             -CCCCCCCEEEECCcccC
Confidence             47999999999999876

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=2.8e-43  Score=290.58  Aligned_cols=239  Identities=26%  Similarity=0.340  Sum_probs=200.8

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhH-HHHHHHHHHhc-CCcEEEEEecCC----CHHHHHHHHHHHHHHc
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE-LDARLHEWKNK-GFKVTGSVCDLS----SREQREKLIETVTSIF   75 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~-~~~~~~~~~D~~----~~~~~~~~~~~~~~~~   75 (259)
                      ++||||||+|||+++|++|+++|++|++++|+.++ .+++.+++... +......++|+.    ..+.++++++++.+++
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF   82 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHh
Confidence            79999999999999999999999999999998665 45666666644 456777666554    3577788888888999


Q ss_pred             CCCccEEEEcCCCCCCCCCCC-----------CCHHHHHHHHHHhhHhHHHHHHHHHHHhHh-----CCCCEEEEecCCC
Q 024994           76 QGKLNILINNAAIAFVKPTVD-----------ITAEDMSTVSSTNFESVFHLSQLAHPLFKA-----SGNGSIVFISSVG  139 (259)
Q Consensus        76 ~~~id~vi~~ag~~~~~~~~~-----------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-----~~~~~ii~isS~~  139 (259)
                       +++|++|||||+..+.++.+           ...+.+...+..|+.+.+...+...+.+..     ...+.+++++|..
T Consensus        83 -g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (266)
T d1mxha_          83 -GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAM  161 (266)
T ss_dssp             -SCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGG
T ss_pred             -CCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhcc
Confidence             79999999999876554322           235567788899999999998888777754     2357889999999


Q ss_pred             ccCCCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCC-CCHHH
Q 024994          140 GVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRA-GEPDE  218 (259)
Q Consensus       140 ~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  218 (259)
                      +..+.|++..|++||+++++|+|+++.|++++|||||+|+||+++|+....       +...+.+...+|++|. ++|||
T Consensus       162 ~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~-------~~~~~~~~~~~pl~r~~~~pee  234 (266)
T d1mxha_         162 TDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMP-------QETQEEYRRKVPLGQSEASAAQ  234 (266)
T ss_dssp             GGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSC-------HHHHHHHHTTCTTTSCCBCHHH
T ss_pred             ccccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCC-------HHHHHHHHhcCCCCCCCCCHHH
Confidence            999999999999999999999999999999999999999999999986532       3466778888998765 89999


Q ss_pred             HHHHHHHHhCCCCCCccccEEEeCCCceee
Q 024994          219 VSSLVAFLCLPAASYITGQIICVDGGVTVT  248 (259)
Q Consensus       219 va~~~~~l~~~~~~~~~G~~l~~dgG~~~~  248 (259)
                      ++++++||+++++.|+||++|.+|||+++.
T Consensus       235 va~~v~fL~s~~s~~itG~~i~vDGG~~l~  264 (266)
T d1mxha_         235 IADAIAFLVSKDAGYITGTTLKVDGGLILA  264 (266)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHHhCchhCCccCCeEEECccHhhh
Confidence            999999999999999999999999999874

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-44  Score=297.60  Aligned_cols=219  Identities=27%  Similarity=0.350  Sum_probs=193.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHC-CCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARF-GAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      +++|||||++|||+++|++|+++ |++|++++|+.+++++..++++..+.++.++++|++|.++++++++++.+++ +++
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~-g~i   82 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY-GGL   82 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH-SSE
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhc-CCc
Confidence            46799999999999999999986 8999999999999999999999888889999999999999999999999999 799


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCC----------------
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG----------------  143 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~----------------  143 (259)
                      |+||||||+....+..+.+.++|+++|++|+++++.+++.++|+|++  .|+||+++|..+..+                
T Consensus        83 DiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~--~g~ivnisS~~~~~~~~~~~~y~~~k~~~~~  160 (275)
T d1wmaa1          83 DVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP--QGRVVNVSSIMSVRALKSCSPELQQKFRSET  160 (275)
T ss_dssp             EEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHHHHTSCHHHHHHHHCSS
T ss_pred             EEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCcccccccceeccccccchhhhhhhcccc
Confidence            99999999988888888889999999999999999999999999965  489999999765322                


Q ss_pred             -------------------------CCCChhhhhhHHHHHHHHHHHHHHHcc----CCceEEEEeCCceeCCCCCCCcCC
Q 024994          144 -------------------------IPSVSLYGAYKGAMNQLTKNLACEWAK----DNIRTNTVAPWVIKTSMIKPFEEG  194 (259)
Q Consensus       144 -------------------------~~~~~~Y~~sK~a~~~~~~~~a~e~~~----~gi~v~~v~pg~v~t~~~~~~~~~  194 (259)
                                               ..+..+|++||+++.+|++.+++++++    .||+||+|+||+|+|++.....  
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~~~--  238 (275)
T d1wmaa1         161 ITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKA--  238 (275)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCTTC--
T ss_pred             cchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccCcc--
Confidence                                     123457999999999999999999866    4899999999999999875321  


Q ss_pred             CCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHh--CCCCCCccccEEEeCC
Q 024994          195 PEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLC--LPAASYITGQIICVDG  243 (259)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~--~~~~~~~~G~~l~~dg  243 (259)
                                        ..+|+|+++.++|++  .++..+.+|+++. |.
T Consensus       239 ------------------~~~pee~A~~~~~~a~~~~~~~~~~G~~~~-~~  270 (275)
T d1wmaa1         239 ------------------TKSPEEGAETPVYLALLPPDAEGPHGQFVS-EK  270 (275)
T ss_dssp             ------------------SBCHHHHTHHHHHHHSCCTTCCCCCSCEEE-TT
T ss_pred             ------------------cCCHHHHHHHHHHHHcCChhhcCCCeEEEE-CC
Confidence                              236899999999987  4556788999886 54

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=2e-43  Score=288.82  Aligned_cols=223  Identities=22%  Similarity=0.226  Sum_probs=184.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHH---HCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH--Hc
Q 024994            1 MTALVTGGTRGIGHATVEELA---RFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTS--IF   75 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~---~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--~~   75 (259)
                      ||||||||++|||+++|++|+   ++|++|++++|+.++++++.+ +...+.++.++++|++|.++++++++++.+  .+
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELED-LAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHH-HHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-HHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            799999999999999999996   579999999999998877654 334466899999999999999999999865  45


Q ss_pred             CCCccEEEEcCCCCCC-CCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC-----------CCCEEEEecCCCccC-
Q 024994           76 QGKLNILINNAAIAFV-KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-----------GNGSIVFISSVGGVR-  142 (259)
Q Consensus        76 ~~~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----------~~~~ii~isS~~~~~-  142 (259)
                       +++|+||||||+... .++.+.+.++|++++++|+.+++.++++++|+|++.           +.+++|+++|..+.. 
T Consensus        82 -~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~  160 (248)
T d1snya_          82 -QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQ  160 (248)
T ss_dssp             -GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCST
T ss_pred             -CCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccC
Confidence             689999999998655 467789999999999999999999999999999763           368999999987764 


Q ss_pred             --CCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHH
Q 024994          143 --GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVS  220 (259)
Q Consensus       143 --~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va  220 (259)
                        +.+++.+|++||+|+.+|+++++.|++++||+||+|+||+++|++.....+.                    ++++.+
T Consensus       161 ~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~~~~~~--------------------~~~~~~  220 (248)
T d1snya_         161 GNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSAPL--------------------DVPTST  220 (248)
T ss_dssp             TCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTTCSB--------------------CHHHHH
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCcccccCCC--------------------CchHHH
Confidence              4566789999999999999999999999999999999999999997643221                    122323


Q ss_pred             HHHHHHhCCCCCCccccEEEeCCCc
Q 024994          221 SLVAFLCLPAASYITGQIICVDGGV  245 (259)
Q Consensus       221 ~~~~~l~~~~~~~~~G~~l~~dgG~  245 (259)
                      +.++.++.......+|++|++||+.
T Consensus       221 ~~i~~~i~~l~~~~tG~~i~~dG~~  245 (248)
T d1snya_         221 GQIVQTISKLGEKQNGGFVNYDGTP  245 (248)
T ss_dssp             HHHHHHHHHCCGGGTTCEECTTSCB
T ss_pred             HHHHHHHHhcCccCCCcEEEECCeE
Confidence            3333333333445699999999875

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=100.00  E-value=1.6e-43  Score=293.43  Aligned_cols=243  Identities=19%  Similarity=0.235  Sum_probs=199.4

Q ss_pred             CEEEEEcCcc--hHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTR--GIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~--giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||+|  |||+++|++|+++|++|++++|+++. ++..+++.+.+....+..+|++++++++++++++.+.+ ++
T Consensus         6 K~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~-~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-g~   83 (274)
T d2pd4a1           6 KKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESL-EKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL-GS   83 (274)
T ss_dssp             CEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTT-HHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT-SC
T ss_pred             CEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHc-CC
Confidence            8999999765  99999999999999999999999653 44556666666677888999999999999999999999 79


Q ss_pred             ccEEEEcCCCCCCC----CCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhH
Q 024994           79 LNILINNAAIAFVK----PTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYK  154 (259)
Q Consensus        79 id~vi~~ag~~~~~----~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK  154 (259)
                      +|++|||+|.....    ...+...+.+...+.++..+.+...+.+.+.+.  ....|+++++.+...+.+....|+++|
T Consensus        84 id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~~~~~~~~~~~~~y~asK  161 (274)
T d2pd4a1          84 LDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLN--NGASVLTLSYLGSTKYMAHYNVMGLAK  161 (274)
T ss_dssp             EEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE--EEEEEEEEECGGGTSBCTTCHHHHHHH
T ss_pred             CCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccc--cCcceeeecccccccccccchhhhHHH
Confidence            99999999986443    333344556666666666666666555544332  235567777777777788889999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 024994          155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYI  234 (259)
Q Consensus       155 ~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~  234 (259)
                      +++.+|+|+++.|++++|||||+|+||++.|++......   .+..........|.+|+++|+|++++++||+|+.+.++
T Consensus       162 ~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~---~~~~~~~~~~~~p~~r~~~pedIA~~v~fL~S~~s~~i  238 (274)
T d2pd4a1         162 AALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIAD---FRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSSGV  238 (274)
T ss_dssp             HHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTT---HHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHhhHHHhcCcCceecccccCcccCccccccCc---hHHHHHHHhhhhhccCCcCHHHHHHHHHHHhChhhCCC
Confidence            999999999999999999999999999999998765432   34466777788999999999999999999999999999


Q ss_pred             cccEEEeCCCceeeec
Q 024994          235 TGQIICVDGGVTVTVN  250 (259)
Q Consensus       235 ~G~~l~~dgG~~~~~~  250 (259)
                      ||++|.+|||+++.-+
T Consensus       239 tG~~i~vDGG~~~~g~  254 (274)
T d2pd4a1         239 SGEVHFVDAGYHVMGM  254 (274)
T ss_dssp             CSCEEEESTTGGGBSS
T ss_pred             cCceEEECCChhhccC
Confidence            9999999999987543

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=2.6e-43  Score=295.35  Aligned_cols=241  Identities=24%  Similarity=0.220  Sum_probs=197.2

Q ss_pred             CEEEEEcCcc--hHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhc---------C---CcEEEEEec---------
Q 024994            1 MTALVTGGTR--GIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK---------G---FKVTGSVCD---------   57 (259)
Q Consensus         1 k~~lItG~s~--giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---------~---~~~~~~~~D---------   57 (259)
                      |++|||||+|  |||+++|++|+++|++|++++|+..............         .   ..-....+|         
T Consensus         9 K~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (297)
T d1d7oa_           9 KRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNPEDV   88 (297)
T ss_dssp             CEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSGGGS
T ss_pred             CEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhccccccc
Confidence            8999999876  9999999999999999999999876543332222110         0   011222333         


Q ss_pred             -----------CCCHHHHHHHHHHHHHHcCCCccEEEEcCCCCC--CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHh
Q 024994           58 -----------LSSREQREKLIETVTSIFQGKLNILINNAAIAF--VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLF  124 (259)
Q Consensus        58 -----------~~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~  124 (259)
                                 .++..+++++++++.+++ +++|+||||||...  ..++.+.+.++|++++++|+.+++.++++++|.|
T Consensus        89 ~~dv~~~~~~~~~~~~~~~~~~~~~~~~~-G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~  167 (297)
T d1d7oa_          89 PEDVKANKRYAGSSNWTVQEAAECVRQDF-GSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIM  167 (297)
T ss_dssp             CHHHHTSHHHHHCCCCSHHHHHHHHHHHH-SCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             hhhhhhhhhhhhccHHHHHHHHHHHHHHh-CCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHHHHHh
Confidence                       345567788999999999 79999999999854  4678899999999999999999999999999888


Q ss_pred             HhCCCCEEEEecCCCcc-CCCCCChhhhhhHHHHHHHHHHHHHHHc-cCCceEEEEeCCceeCCCCCCCcCCCCchHHHH
Q 024994          125 KASGNGSIVFISSVGGV-RGIPSVSLYGAYKGAMNQLTKNLACEWA-KDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLD  202 (259)
Q Consensus       125 ~~~~~~~ii~isS~~~~-~~~~~~~~Y~~sK~a~~~~~~~~a~e~~-~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~  202 (259)
                      .+.  ++++++++.+.. ...+....|+++|+++.++++.++.+++ ++|||||+|+||+++|++.....   ..+...+
T Consensus       168 ~~~--g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~---~~~~~~~  242 (297)
T d1d7oa_         168 NPG--GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIG---FIDTMIE  242 (297)
T ss_dssp             EEE--EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCS---HHHHHHH
T ss_pred             hcC--CcceeeeehhhcccccccccceecccccccccccccchhccccceEEecccccccccchhhhhcc---CCHHHHH
Confidence            654  566666665544 3456778899999999999999999996 57999999999999999886542   2334677


Q ss_pred             hhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCcee
Q 024994          203 GIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTV  247 (259)
Q Consensus       203 ~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~  247 (259)
                      ......|++|+++|+||+++++||+++.++|+|||+|.+|||++.
T Consensus       243 ~~~~~~PlgR~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~s~  287 (297)
T d1d7oa_         243 YSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNS  287 (297)
T ss_dssp             HHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHHHhCchhcCCcCceEEECcCHhh
Confidence            888899999999999999999999999999999999999999875

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=100.00  E-value=1.2e-42  Score=287.28  Aligned_cols=243  Identities=21%  Similarity=0.243  Sum_probs=203.8

Q ss_pred             CEEEEEc--CcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC--
Q 024994            1 MTALVTG--GTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ--   76 (259)
Q Consensus         1 k~~lItG--~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--   76 (259)
                      |++||||  +++|||+++|++|+++|++|++++|+.+++.+...+  ..+.+...+++|++++++++.+++.+.+.++  
T Consensus         7 K~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~--~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~~   84 (268)
T d2h7ma1           7 KRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITD--RLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG   84 (268)
T ss_dssp             CEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHT--TSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHH--HcCCceeeEeeecccccccccccchhhhccccC
Confidence            8999999  467999999999999999999999998776443222  3355777889999999999999999988763  


Q ss_pred             CCccEEEEcCCCCCC-----CCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhh
Q 024994           77 GKLNILINNAAIAFV-----KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYG  151 (259)
Q Consensus        77 ~~id~vi~~ag~~~~-----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~  151 (259)
                      +++|+++||+|....     .++.+.+.++|.+.+++|+.+.+...+...+.+.   .+.+++++|.....+.|.+..|+
T Consensus        85 ~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~s~~~~~~~p~~~~y~  161 (268)
T d2h7ma1          85 NKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMN---PGGSIVGMDFDPSRAMPAYNWMT  161 (268)
T ss_dssp             CCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE---EEEEEEEEECCCSSCCTTTHHHH
T ss_pred             CCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcc---cccccccccccccccCcccchhh
Confidence            569999999997532     3556788999999999999999999988876653   34567777778888889999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCc-------hHHHHhhhhcCCCCC-CCCHHHHHHHH
Q 024994          152 AYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEG-------SEFLDGIARQTPIGR-AGEPDEVSSLV  223 (259)
Q Consensus       152 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~-------~~~~~~~~~~~~~~~-~~~~~~va~~~  223 (259)
                      ++|+++.+|+|+++.|++++|||||+|+||++.|++..........       +...+.+....|++| +++|+|+++++
T Consensus       162 ~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~rr~~~p~dva~~v  241 (268)
T d2h7ma1         162 VAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTV  241 (268)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHHHHHHH
T ss_pred             ccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence            9999999999999999999999999999999999987543322221       234556667788876 89999999999


Q ss_pred             HHHhCCCCCCccccEEEeCCCceee
Q 024994          224 AFLCLPAASYITGQIICVDGGVTVT  248 (259)
Q Consensus       224 ~~l~~~~~~~~~G~~l~~dgG~~~~  248 (259)
                      .||+++.++|+||++|.+|||++.+
T Consensus       242 ~fL~Sd~a~~iTG~~i~vDGG~~~~  266 (268)
T d2h7ma1         242 CALLSDWLPATTGDIIYADGGAHTQ  266 (268)
T ss_dssp             HHHHSSSCTTCCSEEEEESTTGGGC
T ss_pred             HHHhCchhcCccCCEEEECcCcccc
Confidence            9999999999999999999999764

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.9e-42  Score=279.73  Aligned_cols=222  Identities=18%  Similarity=0.133  Sum_probs=190.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC-CCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ-GKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~~i   79 (259)
                      |++|||||++|||+++|++|+++|++|++++++....          ........+|.++.++.+.+.+++.+.++ +++
T Consensus         3 K~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i   72 (236)
T d1dhra_           3 RRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE----------ASASVIVKMTDSFTEQADQVTAEVGKLLGDQKV   72 (236)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT----------SSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc----------ccccceeecccCcHHHHHHHHHHHHHHhCCCCc
Confidence            8999999999999999999999999999999876532          23556677888889999988888888763 469


Q ss_pred             cEEEEcCCCCCC-CCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           80 NILINNAAIAFV-KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        80 d~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      |+||||||.... .+..+.+.++|++++++|+.+++.+++.++|+|++  +|+||++||.++..+.+.+.+|++||+|++
T Consensus        73 D~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~asKaal~  150 (236)
T d1dhra_          73 DAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAALDGTPGMIGYGMAKGAVH  150 (236)
T ss_dssp             EEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHHHH
T ss_pred             eEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccc--ccceeEEccHHHcCCccCCcccHHHHHHHH
Confidence            999999997654 45566778999999999999999999999999965  599999999999999999999999999999


Q ss_pred             HHHHHHHHHHc--cCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccc
Q 024994          159 QLTKNLACEWA--KDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG  236 (259)
Q Consensus       159 ~~~~~~a~e~~--~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G  236 (259)
                      +|+|+++.|++  ++|||||+|+||+++|++.+...+.             .+.+++.+|+++++.+.+++++...+++|
T Consensus       151 ~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~~~-------------~~~~~~~~pe~va~~~~~l~s~~~~~i~G  217 (236)
T d1dhra_         151 QLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPE-------------ADFSSWTPLEFLVETFHDWITGNKRPNSG  217 (236)
T ss_dssp             HHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTT-------------SCGGGSEEHHHHHHHHHHHHTTTTCCCTT
T ss_pred             HHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhCcc-------------chhhcCCCHHHHHHHHHHHhCCCccCCCC
Confidence            99999999998  5799999999999999986543222             12345678999999999999999999999


Q ss_pred             cEEEe---CCCcee
Q 024994          237 QIICV---DGGVTV  247 (259)
Q Consensus       237 ~~l~~---dgG~~~  247 (259)
                      +.+.+   ||+..+
T Consensus       218 ~~i~v~~~~g~t~~  231 (236)
T d1dhra_         218 SLIQVVTTDGKTEL  231 (236)
T ss_dssp             CEEEEEEETTEEEE
T ss_pred             CeEEEEEECCEEEE
Confidence            87766   555544

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=2e-41  Score=277.11  Aligned_cols=220  Identities=20%  Similarity=0.206  Sum_probs=180.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC--EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC-
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG-   77 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~-   77 (259)
                      |+||||||++|||+++|++|+++|+  +|++++|+.++++++.+   ..+.+++++++|++|.++++++++++.+.++. 
T Consensus         4 KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~---~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~   80 (250)
T d1yo6a1           4 GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS---IKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             SEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT---CCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHH---hhCCceEEEEEecCCHHHHHHHHHHHHHHhCCC
Confidence            7999999999999999999999996  79999999988776432   23568999999999999999999999998732 


Q ss_pred             CccEEEEcCCCCC-CCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC-----------CCCEEEEecCCCccCC--
Q 024994           78 KLNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-----------GNGSIVFISSVGGVRG--  143 (259)
Q Consensus        78 ~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----------~~~~ii~isS~~~~~~--  143 (259)
                      ++|+||||||+.. .++..+.+.++|++++++|+.|++.+++.++|+|++.           ..+++++++|......  
T Consensus        81 ~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~  160 (250)
T d1yo6a1          81 GLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDN  160 (250)
T ss_dssp             CCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTC
T ss_pred             CeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccCC
Confidence            4999999999864 4677889999999999999999999999999999753           2378999988765443  


Q ss_pred             -----CCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHH
Q 024994          144 -----IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDE  218 (259)
Q Consensus       144 -----~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (259)
                           ..+..+|++||+|+.+|+++++.|++++||+||+|+||+|+|+|....                    ...+|++
T Consensus       161 ~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~~--------------------~~~~~e~  220 (250)
T d1yo6a1         161 TSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKN--------------------AALTVEQ  220 (250)
T ss_dssp             CSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC---------------------------------HH
T ss_pred             cccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCCC--------------------CCCCHHH
Confidence                 234567999999999999999999999999999999999999986431                    1135788


Q ss_pred             HHHHHHHHhCCCCCCccccEEEeCC
Q 024994          219 VSSLVAFLCLPAASYITGQIICVDG  243 (259)
Q Consensus       219 va~~~~~l~~~~~~~~~G~~l~~dg  243 (259)
                      .+..++..+.......+|++|..||
T Consensus       221 ~a~~~~~~~~~~~~~~sG~f~~~~g  245 (250)
T d1yo6a1         221 STAELISSFNKLDNSHNGRFFMRNL  245 (250)
T ss_dssp             HHHHHHHHHTTCCGGGTTCEEETTE
T ss_pred             HHHHHHHHHhcCCCCCCeEEECCCC
Confidence            8888888887766778999998885

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-40  Score=273.46  Aligned_cols=213  Identities=23%  Similarity=0.244  Sum_probs=187.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKN-KGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |+|||||||+|||+++|++|+++|++|++++|+.+++++..+++.. .+..+..+.+|+++.+.+....+++.+.+ +.+
T Consensus        15 K~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-g~~   93 (269)
T d1xu9a_          15 KKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM-GGL   93 (269)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH-TSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHh-CCc
Confidence            7999999999999999999999999999999999999998888654 36678899999999999999999999999 799


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (259)
                      |+++||||.....++.+.+.++|++++++|+.+++.+++.++|+|++. .|+||++||.++..+.|...+|++||+|+++
T Consensus        94 ~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~-~G~ii~isS~~~~~~~p~~~~Y~asKaal~~  172 (269)
T d1xu9a_          94 DMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAAYSASKFALDG  172 (269)
T ss_dssp             SEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSCCTTCHHHHHHHHHHHH
T ss_pred             cccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc-CCcceEeccchhcCCCCCchHHHHHHHHHHH
Confidence            999999999888889999999999999999999999999999999754 6999999999999999999999999999999


Q ss_pred             HHHHHHHHHcc--CCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhC
Q 024994          160 LTKNLACEWAK--DNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCL  228 (259)
Q Consensus       160 ~~~~~a~e~~~--~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  228 (259)
                      |+++|+.|+++  .||+||+|+||+|+|++.......             .+.....+++++++.+.....
T Consensus       173 ~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~~~~-------------~~~~~~~~~e~~a~~i~~~~~  230 (269)
T d1xu9a_         173 FFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSG-------------IVHMQAAPKEECALEIIKGGA  230 (269)
T ss_dssp             HHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCG-------------GGGGGCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHhccC-------------CccccCCCHHHHHHHHHHHhh
Confidence            99999999975  469999999999999976432111             011123468888887766553

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=1.3e-40  Score=273.17  Aligned_cols=220  Identities=29%  Similarity=0.428  Sum_probs=170.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+||||||++|||+++|++|+++|++|++++|+++.                 ...|+++.+..+....++.....+.+|
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~-----------------~~~d~~~~~~~~~~~~~~~~~~~~~id   64 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE-----------------VIADLSTAEGRKQAIADVLAKCSKGMD   64 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS-----------------EECCTTSHHHHHHHHHHHHTTCTTCCS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH-----------------HHHHhcCHHHHHHHHHHHHHHhCCCCc
Confidence            799999999999999999999999999999997542                 247999999988887777666546799


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccC------------------
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR------------------  142 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~------------------  142 (259)
                      +++||||+...       .+.+.....+|..+...+.+...+.+.+.....+.++++.....                  
T Consensus        65 ~lv~~Ag~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  137 (257)
T d1fjha_          65 GLVLCAGLGPQ-------TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEA  137 (257)
T ss_dssp             EEEECCCCCTT-------CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHH
T ss_pred             EEEEcCCCCCc-------HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEE
Confidence            99999997532       23467778899999999999999998887677777776643221                  


Q ss_pred             ---------C-CCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhh-hhcCCCC
Q 024994          143 ---------G-IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGI-ARQTPIG  211 (259)
Q Consensus       143 ---------~-~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~~  211 (259)
                               + .++..+|++||+|+++|+|+++.||+++|||||+|+||+++|++.+....++.   ..+.+ ....|++
T Consensus       138 ~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~---~~~~~~~~~~Plg  214 (257)
T d1fjha_         138 KARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPR---YGESIAKFVPPMG  214 (257)
T ss_dssp             HHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC------------------------CCCSTT
T ss_pred             EEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHH---HHHHHHhcCCCCC
Confidence                     1 12345799999999999999999999999999999999999999876544333   23333 3346999


Q ss_pred             CCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCcee
Q 024994          212 RAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTV  247 (259)
Q Consensus       212 ~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~  247 (259)
                      |+++|+|+++++.||+|++++|+||+.|.+|||++.
T Consensus       215 R~g~p~eva~~v~fL~S~~s~~itG~~i~vDGG~ta  250 (257)
T d1fjha_         215 RRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGIDA  250 (257)
T ss_dssp             SCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred             CCcCHHHHHHHHHHHhCchhCCccCceEEeCCCccc
Confidence            999999999999999999999999999999999764

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=1.3e-40  Score=269.96  Aligned_cols=222  Identities=18%  Similarity=0.154  Sum_probs=185.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC-CCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ-GKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~~i   79 (259)
                      ++||||||++|||+++|++|+++|++|++++|+.+..          ........+|+.+.+......+.+.+.+. +++
T Consensus         3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i   72 (235)
T d1ooea_           3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ----------ADSNILVDGNKNWTEQEQSILEQTASSLQGSQV   72 (235)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT----------SSEEEECCTTSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc----------ccccceeccccCchhHHHHHHHHHHHHhcCCCe
Confidence            3689999999999999999999999999999987542          22455667888888888887777777542 689


Q ss_pred             cEEEEcCCCCCCC-CCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           80 NILINNAAIAFVK-PTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        80 d~vi~~ag~~~~~-~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      |+||||||..... +..+.+.++|+.++++|+.+++.++++++|+|++  +|+||++||..+..+.+++.+|++||+|++
T Consensus        73 D~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~Y~asKaal~  150 (235)
T d1ooea_          73 DGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLLQLTGAAAAMGPTPSMIGYGMAKAAVH  150 (235)
T ss_dssp             EEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHHHH
T ss_pred             eEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhccccccc--ceEEEEeccHHhcCCcccccchHHHHHHHH
Confidence            9999999986554 4555567899999999999999999999999965  489999999999999999999999999999


Q ss_pred             HHHHHHHHHHc--cCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHH-HhCCCCCCcc
Q 024994          159 QLTKNLACEWA--KDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAF-LCLPAASYIT  235 (259)
Q Consensus       159 ~~~~~~a~e~~--~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~-l~~~~~~~~~  235 (259)
                      +|+++++.|++  +.+|+||+|+||+++|++.+...+             ..+..++.+|+++++.+++ +.++..++++
T Consensus       151 ~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~~-------------~~~~~~~~~~~~va~~~~~~l~~~~~~~~t  217 (235)
T d1ooea_         151 HLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMP-------------NADHSSWTPLSFISEHLLKWTTETSSRPSS  217 (235)
T ss_dssp             HHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHST-------------TCCGGGCBCHHHHHHHHHHHHHCGGGCCCT
T ss_pred             HHHHHHHHHhccCCCceEEEEEecCcCcCcchhhhCc-------------CCccccCCCHHHHHHHHHHHhcCccccCCC
Confidence            99999999997  468999999999999997644322             2233467789999999874 5556678899


Q ss_pred             ccEEEe---CCCcee
Q 024994          236 GQIICV---DGGVTV  247 (259)
Q Consensus       236 G~~l~~---dgG~~~  247 (259)
                      |+.+.+   ||+.++
T Consensus       218 G~~i~v~~~~g~~~~  232 (235)
T d1ooea_         218 GALLKITTENGTSTI  232 (235)
T ss_dssp             TCEEEEEEETTEEEE
T ss_pred             ceEEEEEeeCCEEEE
Confidence            999999   555554

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=100.00  E-value=2.4e-33  Score=229.98  Aligned_cols=223  Identities=22%  Similarity=0.186  Sum_probs=176.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCCh---hHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQ---IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ   76 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (259)
                      +|+|||||++|||+++|++|+++|+ +|++++|+.   +..++..+++...+.++.++.+|++|.++++++++++.+.  
T Consensus        10 gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~--   87 (259)
T d2fr1a1          10 GTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD--   87 (259)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT--
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccc--
Confidence            5899999999999999999999999 689999874   4566777778777889999999999999999999987654  


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHH
Q 024994           77 GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGA  156 (259)
Q Consensus        77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  156 (259)
                      +++|.||||+|.....++.+.+.++|++++++|+.+++.+.+++    ...+.++||++||..+..+.+++..|+++|++
T Consensus        88 ~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~----~~~~~~~iv~~SS~a~~~g~~~~~~YaAaka~  163 (259)
T d2fr1a1          88 VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELT----RELDLTAFVLFSSFASAFGAPGLGGYAPGNAY  163 (259)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHH----TTSCCSEEEEEEEHHHHTCCTTCTTTHHHHHH
T ss_pred             ccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHh----hccCCceEeeecchhhccCCcccHHHHHHHHh
Confidence            47999999999999899999999999999999999999987765    55567899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccc
Q 024994          157 MNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG  236 (259)
Q Consensus       157 ~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G  236 (259)
                      ++.|++.++    ..|+++++|+||++.++.+....       ..+.+. . ..-...+|+++++++..++...  ....
T Consensus       164 l~~la~~~~----~~Gi~v~~I~pg~~~~~g~~~~~-------~~~~~~-~-~G~~~~~~~~~~~~l~~~l~~~--~~~~  228 (259)
T d2fr1a1         164 LDGLAQQRR----SDGLPATAVAWGTWAGSGMAEGP-------VADRFR-R-HGVIEMPPETACRALQNALDRA--EVCP  228 (259)
T ss_dssp             HHHHHHHHH----HTTCCCEEEEECCBC-------------------CT-T-TTEECBCHHHHHHHHHHHHHTT--CSSC
T ss_pred             HHHHHHHHH----hCCCCEEECCCCcccCCccccch-------HHHHHH-h-cCCCCCCHHHHHHHHHHHHhCC--CceE
Confidence            998877664    45999999999988765432211       111111 0 0112457999999998888543  3344


Q ss_pred             cEEEeCCC
Q 024994          237 QIICVDGG  244 (259)
Q Consensus       237 ~~l~~dgG  244 (259)
                      ..+.+|..
T Consensus       229 ~v~~~d~~  236 (259)
T d2fr1a1         229 IVIDVRWD  236 (259)
T ss_dssp             EECEECHH
T ss_pred             EEEeCcHH
Confidence            45566643

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=1.6e-24  Score=184.95  Aligned_cols=230  Identities=15%  Similarity=0.046  Sum_probs=159.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChh-----HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI-----ELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIF   75 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (259)
                      |+||||||||.||.+++++|+++|+.|++++|...     +++.+..+......++.++++|++|.++++++++..    
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----   77 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV----   77 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH----
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc----
Confidence            78999999999999999999999999999999543     233333332333558999999999999999998864    


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCcc-----C------CC
Q 024994           76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV-----R------GI  144 (259)
Q Consensus        76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~-----~------~~  144 (259)
                        .+|+|||+|+..+...    +.++.+..+++|+.++.++++++...- ..+..++|++||...+     .      +.
T Consensus        78 --~~d~v~h~aa~~~~~~----~~~~~~~~~~~Nv~gt~nllea~~~~~-~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~  150 (357)
T d1db3a_          78 --QPDEVYNLGAMSHVAV----SFESPEYTADVDAMGTLRLLEAIRFLG-LEKKTRFYQASTSELYGLVQEIPQKETTPF  150 (357)
T ss_dssp             --CCSEEEECCCCCTTTT----TTSCHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGGTTCCSSSBCTTSCC
T ss_pred             --CCCEEEEeecccccch----hhhCHHHHHHHHHHHHHHHHHHHHHhC-CCCCcEEEEEEchhhhCCCCCCCcCCCCCC
Confidence              7999999999865432    234456678999999999999883221 1234589999996532     1      12


Q ss_pred             CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhh-cCCC-----C----CCC
Q 024994          145 PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIAR-QTPI-----G----RAG  214 (259)
Q Consensus       145 ~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~-----~----~~~  214 (259)
                      .+...|+.||.+.+.+++.+++.+   +++++.++|+.+++|.................... ..+.     +    -+.
T Consensus       151 ~P~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~  227 (357)
T d1db3a_         151 YPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWG  227 (357)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCE
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHh---CCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecce
Confidence            245789999999999999998876   79999999999999864322111111111111111 1110     1    255


Q ss_pred             CHHHHHHHHHHHhCCCCCCccccEEEeCCCceee
Q 024994          215 EPDEVSSLVAFLCLPAASYITGQIICVDGGVTVT  248 (259)
Q Consensus       215 ~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~  248 (259)
                      .++|+++++..++...    .++.+++.+|..++
T Consensus       228 ~v~D~~~a~~~~~~~~----~~~~yni~sg~~~s  257 (357)
T d1db3a_         228 HAKDYVKMQWMMLQQE----QPEDFVIATGVQYS  257 (357)
T ss_dssp             EHHHHHHHHHHTTSSS----SCCCEEECCCCCEE
T ss_pred             eechHHHHHHHHHhCC----CCCeEEECCCCcee
Confidence            6899999988777432    57889999887765

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.88  E-value=7.3e-22  Score=166.94  Aligned_cols=233  Identities=16%  Similarity=0.081  Sum_probs=162.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHH-hcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK-NKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++|||||+|.||.+++++|+++|+.|++++|............. ....++.++++|++|.+.+.++++.      .++
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~------~~~   74 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHD------HAI   74 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHH------TTC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhc------cCC
Confidence            689999999999999999999999999999863322111111111 1134788999999999999888875      379


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCC------------CCC
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI------------PSV  147 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~------------~~~  147 (259)
                      |+|||+|+.....    .+.++.++.+++|+.++..+++++    ++.+..++|++||...+.+.            .+.
T Consensus        75 d~ViHlAa~~~~~----~~~~~~~~~~~~Nv~gt~nlL~~~----~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~  146 (338)
T d1udca_          75 DTVIHFAGLKAVG----ESVQKPLEYYDNNVNGTLRLISAM----RAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQ  146 (338)
T ss_dssp             SEEEECCSCCCHH----HHHHCHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCS
T ss_pred             CEEEECCCccchh----hHHhCHHHHHHhHHHHHHHHHHHH----HHhCCCEEEecCcceEEccccccccccccccCCCc
Confidence            9999999964321    233456688999999999999988    44456799999997654321            246


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCC-C--CchHHHHhh----hhc-CCC---------
Q 024994          148 SLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEG-P--EGSEFLDGI----ARQ-TPI---------  210 (259)
Q Consensus       148 ~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-~--~~~~~~~~~----~~~-~~~---------  210 (259)
                      ..|+.+|.+.+.+++..+.++  .++++..++|+.+.++........ +  ........+    ... .++         
T Consensus       147 ~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~  224 (338)
T d1udca_         147 SPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPT  224 (338)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSS
T ss_pred             chHHHHHhhhhHHHHHHHhhc--cCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCccc
Confidence            789999999999999887664  478999999999998865422111 0  001122221    111 111         


Q ss_pred             ------CCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          211 ------GRAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       211 ------~~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                            .-+...+|++.+...+.........++++++.++..+++
T Consensus       225 ~~g~~~rd~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~si  269 (338)
T d1udca_         225 EDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSV  269 (338)
T ss_dssp             TTSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSSCEEH
T ss_pred             CCCCceeeEEEEeehhhhccccccccccccCcceeeecCCCCCcH
Confidence                  113467899877766554333445778999999887764

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.87  E-value=5e-22  Score=169.57  Aligned_cols=228  Identities=14%  Similarity=0.109  Sum_probs=163.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEE-EEeeCChhHHH-HHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIV-HTCSRNQIELD-ARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V-~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |+||||||+|.||.+++++|+++|+.| +++++...... .....+ ....++.++++|++|.+.++++++..      +
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~l~~~~~~~------~   73 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDI-SESNRYNFEHADICDSAEITRIFEQY------Q   73 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTT-TTCTTEEEEECCTTCHHHHHHHHHHH------C
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhh-hhcCCcEEEEccCCCHHHHHHHHHhC------C
Confidence            689999999999999999999999975 44554322110 111111 11357999999999999998888753      7


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC-----CCCEEEEecCCCccCC----------
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-----GNGSIVFISSVGGVRG----------  143 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~ii~isS~~~~~~----------  143 (259)
                      +|+|||+|+.....    .+.++.++.+++|+.++..+++.+.......     +..++|++||...+-.          
T Consensus        74 ~d~VihlAa~~~~~----~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~  149 (361)
T d1kewa_          74 PDAVMHLAAESHVD----RSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENS  149 (361)
T ss_dssp             CSEEEECCSCCCHH----HHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTT
T ss_pred             CCEEEECccccchh----hHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccc
Confidence            99999999964321    1234556789999999999999987654332     2469999999764411          


Q ss_pred             -----------CCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCC-
Q 024994          144 -----------IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIG-  211 (259)
Q Consensus       144 -----------~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-  211 (259)
                                 ..+...|+.||.+.+.+++.++..+   ++++..++|+.+.+|.....   .....+...+....++. 
T Consensus       150 ~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~---~i~~~~lR~~~vyGp~~~~~---~~i~~~i~~~~~g~~~~v  223 (361)
T d1kewa_         150 VTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPE---KLIPLVILNALEGKPLPI  223 (361)
T ss_dssp             SCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTT---SHHHHHHHHHHHTCCEEE
T ss_pred             cCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEecCceECcCCCcC---cHHHHHHHHHHcCCCcEE
Confidence                       1234569999999999999998776   89999999999999865321   11223444444444431 


Q ss_pred             --------CCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCceee
Q 024994          212 --------RAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVT  248 (259)
Q Consensus       212 --------~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~  248 (259)
                              .+...+|+++++..++...   ..|+.+++.+|...+
T Consensus       224 ~g~g~~~r~~i~v~D~a~ai~~~~~~~---~~~~~~Ni~s~~~~s  265 (361)
T d1kewa_         224 YGKGDQIRDWLYVEDHARALHMVVTEG---KAGETYNIGGHNEKK  265 (361)
T ss_dssp             ETTSCCEEEEEEHHHHHHHHHHHHHHC---CTTCEEEECCCCEEE
T ss_pred             eCCCCeEEeCEEHHHHHHHHHHHHhcC---CCCCeEEECCCCCcc
Confidence                    1357899999998888543   247899999887664

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.86  E-value=4.2e-20  Score=159.00  Aligned_cols=225  Identities=16%  Similarity=0.127  Sum_probs=153.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCCh----------------hHHHHHHHHHHh-cCCcEEEEEecCCCHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ----------------IELDARLHEWKN-KGFKVTGSVCDLSSREQ   63 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~----------------~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~   63 (259)
                      |+||||||+|.||.+++++|+++|+.|+++|.-.                ............ .+.++.++++|++|.+.
T Consensus         2 ~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~   81 (393)
T d1i24a_           2 SRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFEF   81 (393)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHHH
Confidence            7899999999999999999999999999987211                111111222221 24578999999999999


Q ss_pred             HHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccC
Q 024994           64 REKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVR  142 (259)
Q Consensus        64 ~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~  142 (259)
                      ++++++..      ++|+|||.|+.... +....+.+.....+++|+.++..+++.+    ++.+ ...+++.||.....
T Consensus        82 l~~~~~~~------~~d~ViHlAa~~~~-~~s~~~~~~~~~~~~~Nv~gt~nll~~~----~~~~~~~~~i~~ss~~~~~  150 (393)
T d1i24a_          82 LAESFKSF------EPDSVVHFGEQRSA-PYSMIDRSRAVYTQHNNVIGTLNVLFAI----KEFGEECHLVKLGTMGEYG  150 (393)
T ss_dssp             HHHHHHHH------CCSEEEECCSCCCH-HHHTSCHHHHHHHHHHHHHHHHHHHHHH----HHHCTTCEEEEECCGGGGC
T ss_pred             HHHHHHhh------cchheecccccccc-ccccccccccccccccccccccHHHHHH----HHhccccceeecccccccc
Confidence            99998864      79999999987532 2223456777888999999999999887    4433 34566666644321


Q ss_pred             ------------------------CCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCC----
Q 024994          143 ------------------------GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEG----  194 (259)
Q Consensus       143 ------------------------~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~----  194 (259)
                                              +..+...|+.||.+.+.+++.++.++   ++++..++|+.+.++........    
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---~l~~~~lR~~~v~G~~~~~~~~~~~~~  227 (393)
T d1i24a_         151 TPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVKTDETEMHEELR  227 (393)
T ss_dssp             CCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSCCTTGGGSGGGC
T ss_pred             ccccccccccccccccccccccccccccccHHHHHhhhhccccccccccc---ceeeeecccccccCCCccccccccccc
Confidence                                    11234579999999999999998776   89999999999998764322110    


Q ss_pred             ------C----CchHHHHhhhhcCCCC---------CCCCHHHHHHHHHHHhCCCCCCccccEEEe
Q 024994          195 ------P----EGSEFLDGIARQTPIG---------RAGEPDEVSSLVAFLCLPAASYITGQIICV  241 (259)
Q Consensus       195 ------~----~~~~~~~~~~~~~~~~---------~~~~~~~va~~~~~l~~~~~~~~~G~~l~~  241 (259)
                            .    ....+........++.         -+...+|+++++..++...  ...|+...+
T Consensus       228 ~~~~~~~~~~~~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~--~~~g~~~~~  291 (393)
T d1i24a_         228 NRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANP--AKAGEFRVF  291 (393)
T ss_dssp             CCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSC--CCTTCEEEE
T ss_pred             cccccccccccchhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhh--cccceeeee
Confidence                  0    0112233333332221         1446899999998888532  235554444

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.85  E-value=2.3e-20  Score=156.23  Aligned_cols=226  Identities=18%  Similarity=0.082  Sum_probs=156.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHH-HHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELD-ARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |+||||||+|.||++++++|+++|++|+.++|...... ...+++ ....++.++.+|++|.+++.+.+...      ..
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~------~~   73 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLREL-GIEGDIQYEDGDMADACSVQRAVIKA------QP   73 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHT-TCGGGEEEEECCTTCHHHHHHHHHHH------CC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHh-cccCCcEEEEccccChHHhhhhhccc------cc
Confidence            89999999999999999999999999999998654321 112222 12347899999999999988887754      68


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccCC------------CCC
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRG------------IPS  146 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~~------------~~~  146 (259)
                      ++++++++......    ..++....++.|+.++..+++++    .+.+ ..++++.||.. .++            ..+
T Consensus        74 ~~~~~~a~~~~~~~----~~~~~~~~~~~n~~g~~~~l~~~----~~~~~~~~~i~~Ss~~-~~~~~~~~~~~E~~~~~p  144 (321)
T d1rpna_          74 QEVYNLAAQSFVGA----SWNQPVTTGVVDGLGVTHLLEAI----RQFSPETRFYQASTSE-MFGLIQAERQDENTPFYP  144 (321)
T ss_dssp             SEEEECCSCCCHHH----HTTSHHHHHHHHTHHHHHHHHHH----HHHCTTSEEEEEEEGG-GGCSCSSSSBCTTSCCCC
T ss_pred             cccccccccccccc----cccchHHHHhhhhhchHHHHHHH----HHhCCCcccccccchh-hcCcccCCCCCCCCCccc
Confidence            88999887643321    12234677889999999998887    4433 34566666643 222            234


Q ss_pred             ChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhh-hhcCCC---C------CCCCH
Q 024994          147 VSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGI-ARQTPI---G------RAGEP  216 (259)
Q Consensus       147 ~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~---~------~~~~~  216 (259)
                      ...|+.+|.+.+.+++.++..+   ++++..++|+.+++|................+. ....+.   +      .+...
T Consensus       145 ~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v  221 (321)
T d1rpna_         145 RSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFA  221 (321)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEH
T ss_pred             cChhHHHHHHHHHHHHHHHhhc---CCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEe
Confidence            6789999999999999998776   799999999999998643211100000111111 111111   1      25678


Q ss_pred             HHHHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          217 DEVSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       217 ~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      +|+++++..++...    .+..+++.+|...++
T Consensus       222 ~D~~~~~~~~~~~~----~~~~~ni~~~~~~s~  250 (321)
T d1rpna_         222 GDYVEAMWLMLQQD----KADDYVVATGVTTTV  250 (321)
T ss_dssp             HHHHHHHHHHHHSS----SCCCEEECCSCEEEH
T ss_pred             HHHHHHHHHHHhcC----CcCCceeccccccee
Confidence            99999998888543    245688888876654

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.84  E-value=2e-19  Score=152.23  Aligned_cols=173  Identities=20%  Similarity=0.118  Sum_probs=131.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhH-HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE-LDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |+||||||+|.||.+++++|+++|++|+++++.... .......-.....++.++++|++|.+.++.+++.      .++
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~------~~~   75 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKE------YKI   75 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHH------SCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhc------cCC
Confidence            899999999999999999999999999999763221 1111111111244788899999999999988864      379


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccC---------------CC
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR---------------GI  144 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~---------------~~  144 (259)
                      |+|||+|+.....    ...+..+....+|+.++..+++++    ++.+..++|++||...+.               +.
T Consensus        76 d~VihlAa~~~~~----~~~~~~~~~~~~N~~~t~~ll~~~----~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~  147 (347)
T d1z45a2          76 DSVIHFAGLKAVG----ESTQIPLRYYHNNILGTVVLLELM----QQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPL  147 (347)
T ss_dssp             CEEEECCSCCCHH----HHHHSHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCC
T ss_pred             CEEEEcccccccc----ccccCcccccccchhhhHHHHHHH----HhcccceEEeecceeeecCcccCCCCCccccccCC
Confidence            9999999975321    123444677889999999999988    445557999999966542               12


Q ss_pred             CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCC
Q 024994          145 PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI  188 (259)
Q Consensus       145 ~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~  188 (259)
                      .+...|+.||.+.+.+++.+.... ..++++..++|+.+.++..
T Consensus       148 ~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~~lR~~~v~g~~~  190 (347)
T d1z45a2         148 GPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGAHP  190 (347)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECCCT
T ss_pred             CCCChhHhHHHHHHHHHHHHHHhh-ccCCcEEEEeecceEeecC
Confidence            245679999999999999997653 4578999999998887654

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.84  E-value=4.9e-20  Score=155.21  Aligned_cols=217  Identities=15%  Similarity=-0.001  Sum_probs=148.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChh-----HHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI-----ELDARLHEWKN-KGFKVTGSVCDLSSREQREKLIETVTSI   74 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~-----~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~   74 (259)
                      |+||||||||.||.+++++|+++|++|++++|...     +...+...... ....+.+..+|+++.+++.+.++..   
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~---   78 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI---   78 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhh---
Confidence            79999999999999999999999999999998532     22222111111 1346889999999999998888753   


Q ss_pred             cCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC-CCCEEEEecCCCcc----------CC
Q 024994           75 FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVGGV----------RG  143 (259)
Q Consensus        75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~isS~~~~----------~~  143 (259)
                         ++|+|||+|+.....    ...++....++.|+.++..+..++....... ...+++..||....          .+
T Consensus        79 ---~~D~Vih~Aa~~~~~----~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~~~  151 (339)
T d1n7ha_          79 ---KPDEVYNLAAQSHVA----VSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTP  151 (339)
T ss_dssp             ---CCSEEEECCSCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSC
T ss_pred             ---ccchhhhcccccccc----ccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCCCCC
Confidence               799999999974321    1234566788899999999988886544432 33456666654322          12


Q ss_pred             CCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHH-HHhhhhcCCC---------CCC
Q 024994          144 IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEF-LDGIARQTPI---------GRA  213 (259)
Q Consensus       144 ~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~-~~~~~~~~~~---------~~~  213 (259)
                      ..+...|+.+|.+.+.+++.++..+   ++++..++|+.+++|.............. ........+.         .-+
T Consensus       152 ~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~  228 (339)
T d1n7ha_         152 FHPRSPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDW  228 (339)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEEC
T ss_pred             CCCcchhhHHHHHHHHHHHHHHHHh---CCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccc
Confidence            2356789999999999999998876   89999999999999864322111110001 1111111111         114


Q ss_pred             CCHHHHHHHHHHHhCCC
Q 024994          214 GEPDEVSSLVAFLCLPA  230 (259)
Q Consensus       214 ~~~~~va~~~~~l~~~~  230 (259)
                      ...+|+++++..++...
T Consensus       229 ~~v~D~a~~~~~~~~~~  245 (339)
T d1n7ha_         229 GFAGDYVEAMWLMLQQE  245 (339)
T ss_dssp             EEHHHHHHHHHHHHTSS
T ss_pred             eeeehHHHHHHHHHhcC
Confidence            56899999998888643

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.84  E-value=8.4e-20  Score=154.40  Aligned_cols=226  Identities=17%  Similarity=0.108  Sum_probs=155.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHH--hcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK--NKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |+||||||+|.||.+++++|+++|++|+++.|+.++...+.....  .......++..|++|.+++..++        ..
T Consensus        12 k~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~--------~~   83 (342)
T d1y1pa1          12 SLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVI--------KG   83 (342)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTT--------TT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhc--------cc
Confidence            799999999999999999999999999999999887665544332  22334556778999988776665        36


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC-CCCEEEEecCCCccCCC-------------
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVGGVRGI-------------  144 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~isS~~~~~~~-------------  144 (259)
                      .|+++|+++....    ..+   ....+..|+.++.++++++    .+. +..++|++||..+....             
T Consensus        84 ~~~v~~~a~~~~~----~~~---~~~~~~~nv~gt~~ll~~~----~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~  152 (342)
T d1y1pa1          84 AAGVAHIASVVSF----SNK---YDEVVTPAIGGTLNALRAA----AATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKS  152 (342)
T ss_dssp             CSEEEECCCCCSC----CSC---HHHHHHHHHHHHHHHHHHH----HTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTC
T ss_pred             chhhhhhcccccc----ccc---ccccccchhhhHHHHHHhh----hcccccccccccccceeeccCCCCCCCccccccc
Confidence            8999999996532    122   3455678999999999887    443 45799999996543211             


Q ss_pred             ------------------CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhh
Q 024994          145 ------------------PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIAR  206 (259)
Q Consensus       145 ------------------~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~  206 (259)
                                        .+...|+.+|.+.+.+++.+++.+. .++++..++|+.+.+|.............+...+..
T Consensus       153 ~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~  231 (342)
T d1y1pa1         153 WNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENK-PHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFN  231 (342)
T ss_dssp             CCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHC-CSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHT
T ss_pred             cccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcc-cccccceecccceeCCCCCccccccchHHHHHHHHc
Confidence                              1234699999999999999988764 468999999999988865432222111122222211


Q ss_pred             cC--------CCCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          207 QT--------PIGRAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       207 ~~--------~~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      ..        +...+..++|++++++..+..  ....|+.+.. ++..+++
T Consensus       232 g~~~~~~~~~~~~~~v~v~Dva~~~i~~l~~--~~~~g~~~~~-~~~~~t~  279 (342)
T d1y1pa1         232 GEVSPALALMPPQYYVSAVDIGLLHLGCLVL--PQIERRRVYG-TAGTFDW  279 (342)
T ss_dssp             TCCCHHHHTCCSEEEEEHHHHHHHHHHHHHC--TTCCSCEEEE-CCEEECH
T ss_pred             CCcCcccCCccceeeeeHHHHHHHHHHhhcC--ccccceEEEE-cCCceEH
Confidence            11        112256789999987766642  3346666644 4444443

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.84  E-value=2.4e-19  Score=151.43  Aligned_cols=229  Identities=12%  Similarity=0.055  Sum_probs=163.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChh----HHHHHHHHHH-hcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI----ELDARLHEWK-NKGFKVTGSVCDLSSREQREKLIETVTSIF   75 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~----~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (259)
                      |++|||||||.||.+++++|.++|++|++++|...    .......... ....++.++.+|+.|........       
T Consensus        17 k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~-------   89 (341)
T d1sb8a_          17 KVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC-------   89 (341)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHH-------
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccc-------
Confidence            79999999999999999999999999999986322    2222211111 11347899999999988765543       


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccC-----------CC
Q 024994           76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR-----------GI  144 (259)
Q Consensus        76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~-----------~~  144 (259)
                       ...+.++|.+......    ...++....+++|+.++..+++++    .+.+..++|++||...+.           +.
T Consensus        90 -~~~~~v~~~~a~~~~~----~~~~~~~~~~~~Nv~gt~~ll~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~  160 (341)
T d1sb8a_          90 -AGVDYVLHQAALGSVP----RSINDPITSNATNIDGFLNMLIAA----RDAKVQSFTYAASSSTYGDHPGLPKVEDTIG  160 (341)
T ss_dssp             -TTCSEEEECCSCCCHH----HHHHCHHHHHHHHTHHHHHHHHHH----HHTTCSEEEEEEEGGGGTTCCCSSBCTTCCC
T ss_pred             -cccccccccccccccc----ccccCccchhheeehhHHHHHHHH----HhcCCceEEEcccceeeCCCCCCCccCCCCC
Confidence             4689999998864321    245667788999999999999988    555667999999976542           22


Q ss_pred             CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCC-CCchHHHHhhhhcCCC---------CCCC
Q 024994          145 PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEG-PEGSEFLDGIARQTPI---------GRAG  214 (259)
Q Consensus       145 ~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~---------~~~~  214 (259)
                      .+...|+.+|.+.+.+++.+++.+   ++++..++|+.+.++........ .........+....+.         ..+.
T Consensus       161 ~p~~~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i  237 (341)
T d1sb8a_         161 KPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFC  237 (341)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCE
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHh---CCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEE
Confidence            345789999999999999998776   79999999999998865432211 1112233333333322         2256


Q ss_pred             CHHHHHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          215 EPDEVSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       215 ~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      .++|++.++..++... ....|+.+++.++..+++
T Consensus       238 ~v~D~~~a~~~~~~~~-~~~~~~~~~~~~~~~~si  271 (341)
T d1sb8a_         238 YIENTVQANLLAATAG-LDARNQVYNIAVGGRTSL  271 (341)
T ss_dssp             EHHHHHHHHHHHHTCC-GGGCSEEEEESCSCCEEH
T ss_pred             EEeccchhhhhhhhcc-ccccceeeeecccccchH
Confidence            6899999988777543 335788999988776653

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=2.5e-19  Score=151.53  Aligned_cols=233  Identities=16%  Similarity=0.095  Sum_probs=161.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCC------hhHHHHHHHHHH-hcCCcEEEEEecCCCHHHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRN------QIELDARLHEWK-NKGFKVTGSVCDLSSREQREKLIETVTS   73 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~------~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~   73 (259)
                      |+||||||+|.||.+++++|+++|+.|+++++.      ........+.+. ....++.++++|++|.+.+++++..   
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~---   79 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK---   79 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH---
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccc---
Confidence            789999999999999999999999999998741      111111111111 1245789999999999999888764   


Q ss_pred             HcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCC----------
Q 024994           74 IFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG----------  143 (259)
Q Consensus        74 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~----------  143 (259)
                         ..+++++|+|+.....    ...++..+.+++|+.++..+++++    .+.+-.+++++||......          
T Consensus        80 ---~~~~~i~h~Aa~~~~~----~~~~~p~~~~~~Nv~gt~~l~~~~----~~~~v~~~i~~ss~~~~~~~~~~~~~~~~  148 (346)
T d1ek6a_          80 ---YSFMAVIHFAGLKAVG----ESVQKPLDYYRVNLTGTIQLLEIM----KAHGVKNLVFSSSATVYGNPQYLPLDEAH  148 (346)
T ss_dssp             ---CCEEEEEECCSCCCHH----HHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGGCSCSSSSBCTTS
T ss_pred             ---cccccccccccccCcH----hhHhCHHHHHHhhhcccccccchh----hhcCcccccccccceeeeccccccccccc
Confidence               4799999999975322    233445678899999999998887    5565678999988754422          


Q ss_pred             --CCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCC---CchHHHHhh----hh-cCC----
Q 024994          144 --IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGP---EGSEFLDGI----AR-QTP----  209 (259)
Q Consensus       144 --~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~---~~~~~~~~~----~~-~~~----  209 (259)
                        ..+...|+.+|.+.+...+.++..  ..++....++|+.+.++.........   ........+    .. ..+    
T Consensus       149 ~~~~~~~~Y~~~k~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~  226 (346)
T d1ek6a_         149 PTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVF  226 (346)
T ss_dssp             CCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEE
T ss_pred             cccccCChHHHHHHHHHHHHHHHHHh--ccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEc
Confidence              123557999999999998887653  34889999999999887653221110   001111111    11 111    


Q ss_pred             -----------CCCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          210 -----------IGRAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       210 -----------~~~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                                 ...+..++|++.++..++........++++++.+|..+++
T Consensus       227 g~~~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~  277 (346)
T d1ek6a_         227 GNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSV  277 (346)
T ss_dssp             CSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEH
T ss_pred             CCcccCCCCCeeEeEEEEEeccchhhhhccccccccCceEEEeCCCCcccH
Confidence                       1125678999998877665444556788999999987653

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=3.8e-20  Score=154.68  Aligned_cols=219  Identities=12%  Similarity=0.058  Sum_probs=150.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+||||||+|.||++++++|+++|++|++++|....-....... ....++.+...|+.+.            .+ .++|
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~------------~~-~~~d   67 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHW-IGHENFELINHDVVEP------------LY-IEVD   67 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGG-TTCTTEEEEECCTTSC------------CC-CCCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHh-cCCCceEEEehHHHHH------------HH-cCCC
Confidence            79999999999999999999999999999986322111111111 1133566666665432            12 4699


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccC----------------CC
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR----------------GI  144 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~----------------~~  144 (259)
                      +|||+|+.......    .++.++.+++|+.++..+++++    ++.+ .++|++||.+.+.                +.
T Consensus        68 ~VihlAa~~~~~~~----~~~~~~~~~~Nv~g~~~ll~~~----~~~~-~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~  138 (312)
T d2b69a1          68 QIYHLASPASPPNY----MYNPIKTLKTNTIGTLNMLGLA----KRVG-ARLLLASTSEVYGDPEVHPQSEDYWGHVNPI  138 (312)
T ss_dssp             EEEECCSCCSHHHH----TTCHHHHHHHHHHHHHHHHHHH----HHHT-CEEEEEEEGGGGBSCSSSSBCTTCCCBCCSS
T ss_pred             EEEECcccCCchhH----HhCHHHHHHHHHHHHHHHHHHH----HHcC-CcEEEEEChheecCCCCCCCCccccCCCCCC
Confidence            99999997543211    1234567889999999999887    4433 4899999965432                12


Q ss_pred             CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCC---------CCCCC
Q 024994          145 PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPI---------GRAGE  215 (259)
Q Consensus       145 ~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~  215 (259)
                      .+...|+.||.+.+.+++.++..+   |+++..++|+.+++|....... ..............+.         .-+..
T Consensus       139 ~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~-~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~  214 (312)
T d2b69a1         139 GPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRMHMNDG-RVVSNFILQALQGEPLTVYGSGSQTRAFQY  214 (312)
T ss_dssp             STTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCC-CHHHHHHHHHHHTCCEEEESSSCCEEECEE
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHh---CCcEEEEEeeeEECCCCCCCCc-cHHHHHHHHHHcCCCeEEeCCCCeeEccEE
Confidence            245789999999999999998887   8999999999999986543211 1112233343333322         12456


Q ss_pred             HHHHHHHHHHHhCCCCCCccccEEEeCCCceeeec
Q 024994          216 PDEVSSLVAFLCLPAASYITGQIICVDGGVTVTVN  250 (259)
Q Consensus       216 ~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~~  250 (259)
                      .+|+++++..++...    .+..+++.+|..+++.
T Consensus       215 v~D~~~~~~~~~~~~----~~~~~n~~~~~~~~~~  245 (312)
T d2b69a1         215 VSDLVNGLVALMNSN----VSSPVNLGNPEEHTIL  245 (312)
T ss_dssp             HHHHHHHHHHHHTSS----CCSCEEESCCCEEEHH
T ss_pred             HHHHHHHHHHHHhhc----cCCceEecCCcccchh
Confidence            899999998887432    3557999999887653

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.83  E-value=2.2e-19  Score=152.80  Aligned_cols=221  Identities=15%  Similarity=0.034  Sum_probs=158.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+||||||+|.||.+++++|.++|+.|+++++.......      .......+..+|+.+.+.+.+++        ..+|
T Consensus        16 MKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~------~~~~~~~~~~~D~~~~~~~~~~~--------~~~d   81 (363)
T d2c5aa1          16 LKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT------EDMFCDEFHLVDLRVMENCLKVT--------EGVD   81 (363)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC------GGGTCSEEEECCTTSHHHHHHHH--------TTCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchh------hhcccCcEEEeechhHHHHHHHh--------hcCC
Confidence            689999999999999999999999999999875432110      01124567788999988876655        3689


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCC-----------------
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-----------------  143 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~-----------------  143 (259)
                      .|||+|+.......   ..+....++..|+.++..++.++    .+.+..++|++||...+..                 
T Consensus        82 ~Vih~a~~~~~~~~---~~~~~~~~~~~n~~gt~~ll~~~----~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~  154 (363)
T d2c5aa1          82 HVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMIEAA----RINGIKRFFYASSACIYPEFKQLETTNVSLKESDAW  154 (363)
T ss_dssp             EEEECCCCCCCHHH---HTTCHHHHHHHHHHHHHHHHHHH----HHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGS
T ss_pred             eEeecccccccccc---cccccccccccccchhhHHHHhH----HhhCccccccccccccccccccccccccccccccCC
Confidence            99999987543211   12345667889999999999888    6666789999999765421                 


Q ss_pred             -CCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchH--HHHhhhhcCC---------CC
Q 024994          144 -IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSE--FLDGIARQTP---------IG  211 (259)
Q Consensus       144 -~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~--~~~~~~~~~~---------~~  211 (259)
                       ..+...|+.+|.+.+.+++.+..++   |+++..++|+.++++.............  .........+         ..
T Consensus       155 ~~~p~~~Yg~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r  231 (363)
T d2c5aa1         155 PAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTR  231 (363)
T ss_dssp             SBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEE
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEE
Confidence             1235679999999999999998887   8999999999999986543322222111  1111111111         22


Q ss_pred             CCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          212 RAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       212 ~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      .+...+|+++++..++...    .++.+++.+|..+++
T Consensus       232 d~i~v~D~~~~~~~~~~~~----~~~~~ni~~~~~~s~  265 (363)
T d2c5aa1         232 SFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVSM  265 (363)
T ss_dssp             CCEEHHHHHHHHHHHHHSS----CCSCEEECCCCCEEH
T ss_pred             EEeehhHHHHHHHHHHhCC----CCCeEEEecCCcccH
Confidence            3667899999998888533    567899999987764

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.83  E-value=1.7e-19  Score=151.38  Aligned_cols=227  Identities=15%  Similarity=0.084  Sum_probs=155.3

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChh-HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQI-ELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      +||||||+|.||.+++++|+++|++|+++++-.. ........+.. ..++.++.+|++|.+++.++++..      ++|
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~-~~~~~~i~~Di~~~~~l~~~~~~~------~~d   74 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS-LGNFEFVHGDIRNKNDVTRLITKY------MPD   74 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT-TCCCEEEECCTTCHHHHHHHHHHH------CCS
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhc-cCCcEEEEcccCCHHHHHHHHHhc------CCc
Confidence            6899999999999999999999999999875221 12222333332 457899999999999999888754      699


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCC----------------
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI----------------  144 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~----------------  144 (259)
                      +|||+|+.....    ...++.+..+++|+.|+.++++++    .+.+..++++.||.....+.                
T Consensus        75 ~Vih~aa~~~~~----~~~~~~~~~~~~Nv~gt~nll~~~----~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~  146 (338)
T d1orra_          75 SCFHLAGQVAMT----TSIDNPCMDFEINVGGTLNLLEAV----RQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCV  146 (338)
T ss_dssp             EEEECCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHH----HHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEET
T ss_pred             eEEeeccccccc----ccccChHHHHHHHHHHHHHHHHhh----hccccccccccccccccccccccccccccccccccc
Confidence            999999975321    123456788999999999999887    44455666666665543221                


Q ss_pred             ------------CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhh-----c
Q 024994          145 ------------PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIAR-----Q  207 (259)
Q Consensus       145 ------------~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~-----~  207 (259)
                                  .+...|+.+|...+.+.......+   ++....+.|..+..+....................     .
T Consensus       147 ~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (338)
T d1orra_         147 DKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGIN  223 (338)
T ss_dssp             TCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCC
T ss_pred             ccccCcccCCccccccccccccchhhhhhhhhhhcc---CcccccccccceeeccccccccccccchhhHHHHHHHhccC
Confidence                        235789999999999999998887   67777777776665544332222211222222211     1


Q ss_pred             CCC---------CCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCcee
Q 024994          208 TPI---------GRAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTV  247 (259)
Q Consensus       208 ~~~---------~~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~  247 (259)
                      .+.         .-+...+|+++++..++... ....|+++++.+|...
T Consensus       224 ~~~~~~g~g~~~r~~~~v~D~~~~~~~~l~~~-~~~~~~~~~i~~~~~~  271 (338)
T d1orra_         224 KPFTISGNGKQVRDVLHAEDMISLYFTALANV-SKIRGNAFNIGGTIVN  271 (338)
T ss_dssp             CCEEEESSSCCEEECEEHHHHHHHHHHHHHTH-HHHTTCEEEESSCGGG
T ss_pred             CceEEeCCCceeEeeecccchhhHHHHHHhcc-ccccCccccccccccc
Confidence            111         11445899999988777432 3467889998766443

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.83  E-value=1.9e-19  Score=151.90  Aligned_cols=221  Identities=14%  Similarity=0.076  Sum_probs=157.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCC-CEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |+||||||||.||++++++|+++| +.|+++++.........     ...++.++++|+++.+++.+.+.       ..+
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~-----~~~~~~~i~~Di~~~~~~~~~~~-------~~~   68 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHV-------KKC   68 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-----TCTTEEEEECCTTTCSHHHHHHH-------HHC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc-----cCCCeEEEECccCChHHHHHHHH-------hCC
Confidence            689999999999999999999999 58999988765443321     14579999999998766544332       258


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCC---------------
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI---------------  144 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~---------------  144 (259)
                      |+|||+|+.....    ...++....+++|+.++..+++++    .+. +.+++++||...+.+.               
T Consensus        69 d~Vih~a~~~~~~----~~~~~~~~~~~~nv~gt~~ll~~~----~~~-~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~  139 (342)
T d2blla1          69 DVVLPLVAIATPI----EYTRNPLRVFELDFEENLRIIRYC----VKY-RKRIIFPSTSEVYGMCSDKYFDEDHSNLIVG  139 (342)
T ss_dssp             SEEEECBCCCCHH----HHHHSHHHHHHHHTHHHHHHHHHH----HHT-TCEEEEECCGGGGBTCCCSSBCTTTCCCBCC
T ss_pred             Ccccccccccccc----ccccCCcccccccccccccccccc----ccc-ccccccccccccccccccccccccccccccc
Confidence            9999999975332    123444577889999999999987    444 3567777775543221               


Q ss_pred             ---CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCC-----chHHHHhhhhcCCC------
Q 024994          145 ---PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPE-----GSEFLDGIARQTPI------  210 (259)
Q Consensus       145 ---~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~-----~~~~~~~~~~~~~~------  210 (259)
                         .+...|+.||.+.+.+++.+++.+   |++++.++|..+.++..........     ...+...+....+.      
T Consensus       140 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g  216 (342)
T d2blla1         140 PVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGG  216 (342)
T ss_dssp             CTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGS
T ss_pred             ccCCCcchhhhcccchhhhhhhhhccc---CceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCC
Confidence               124679999999999999998887   8999999999999886544322111     11222333222221      


Q ss_pred             ---CCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCc
Q 024994          211 ---GRAGEPDEVSSLVAFLCLPAASYITGQIICVDGGV  245 (259)
Q Consensus       211 ---~~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~  245 (259)
                         .-+...+|+++++..++........|+++++.+|.
T Consensus       217 ~~~r~~i~v~D~~~a~~~~~~~~~~~~~g~~~Nig~~~  254 (342)
T d2blla1         217 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPE  254 (342)
T ss_dssp             CCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTT
T ss_pred             CeeeeecccccccceeeeehhhccccCCCeEEEEeccc
Confidence               12567899999999888754444568999997653

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=1.8e-19  Score=152.20  Aligned_cols=216  Identities=15%  Similarity=0.002  Sum_probs=147.5

Q ss_pred             CEE-EEEcCcchHHHHHHHHHHHCCCEEEEeeCChhH-----HHHHHHHHH-hcCCcEEEEEecCCCHHHHHHHHHHHHH
Q 024994            1 MTA-LVTGGTRGIGHATVEELARFGAIVHTCSRNQIE-----LDARLHEWK-NKGFKVTGSVCDLSSREQREKLIETVTS   73 (259)
Q Consensus         1 k~~-lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~   73 (259)
                      |+| |||||+|.||.+++++|.++|+.|++++|..+.     ++.+..... ....++.++.+|++|.+.+.++++..  
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--   78 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV--   78 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH--
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc--
Confidence            555 999999999999999999999999999996432     222111111 11347899999999999999988764  


Q ss_pred             HcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccC-----------
Q 024994           74 IFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR-----------  142 (259)
Q Consensus        74 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~-----------  142 (259)
                          .+++++|+++.....    ...+.....+++|+.++..+++++..+-. .+..++|++||.+.+-           
T Consensus        79 ----~~~~v~~~~a~~~~~----~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~-~~~~~~i~~SS~~vyg~~~~~~~~E~~  149 (347)
T d1t2aa_          79 ----KPTEIYNLGAQSHVK----ISFDLAEYTADVDGVGTLRLLDAVKTCGL-INSVKFYQASTSELYGKVQEIPQKETT  149 (347)
T ss_dssp             ----CCSEEEECCSCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHTTC-TTTCEEEEEEEGGGTCSCSSSSBCTTS
T ss_pred             ----ccceeeeeeeccccc----hhhccchhhhhhHHHHHHHHHHHHHHcCC-CCCcEEEEecchheecCCCCCCCCCCC
Confidence                689999999865322    23455566788999999999988743321 1235899999865321           


Q ss_pred             CCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCc-hHHHHhhhhcCCC---------CC
Q 024994          143 GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEG-SEFLDGIARQTPI---------GR  212 (259)
Q Consensus       143 ~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~---------~~  212 (259)
                      +..+...|+.||.+.+.+++.++..+   ++.+..++|+.+++|........... ...........+.         .-
T Consensus       150 ~~~P~~~Yg~sK~~aE~~~~~~~~~~---~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~  226 (347)
T d1t2aa_         150 PFYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRD  226 (347)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEEC
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceee
Confidence            12245679999999999999998776   89999999999999854322110000 0111111111111         12


Q ss_pred             CCCHHHHHHHHHHHhCCC
Q 024994          213 AGEPDEVSSLVAFLCLPA  230 (259)
Q Consensus       213 ~~~~~~va~~~~~l~~~~  230 (259)
                      +...+|+++++..++...
T Consensus       227 ~i~v~D~~~a~~~~~~~~  244 (347)
T d1t2aa_         227 WGHAKDYVEAMWLMLQND  244 (347)
T ss_dssp             CEEHHHHHHHHHHHHHSS
T ss_pred             eeEecHHHHHHHHHhhcC
Confidence            567899999998888643

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.82  E-value=8.5e-20  Score=153.04  Aligned_cols=223  Identities=17%  Similarity=0.140  Sum_probs=158.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEE------EeeCChhHH-HHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVH------TCSRNQIEL-DARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTS   73 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~------~~~r~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   73 (259)
                      |+||||||+|.||.+++++|+++|+.|.      ..++..... ......+ ....++.++..|.++........     
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~-----   74 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPV-DADPRLRFVHGDIRDAGLLAREL-----   74 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGG-TTCTTEEEEECCTTCHHHHHHHT-----
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhh-hcCCCeEEEEeccccchhhhccc-----
Confidence            6899999999999999999999998544      333221110 0001111 22457999999999988766443     


Q ss_pred             HcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCC----------
Q 024994           74 IFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG----------  143 (259)
Q Consensus        74 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~----------  143 (259)
                         ..+|.|+|+|+.....    ...+..++.+++|+.++..+++++    .+.+..++|++||.+.+.+          
T Consensus        75 ---~~~d~vi~~a~~~~~~----~~~~~~~~~~~~N~~gt~~ll~~~----~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~  143 (322)
T d1r6da_          75 ---RGVDAIVHFAAESHVD----RSIAGASVFTETNVQGTQTLLQCA----VDAGVGRVVHVSTNQVYGSIDSGSWTESS  143 (322)
T ss_dssp             ---TTCCEEEECCSCCCHH----HHHHCCHHHHHHHTHHHHHHHHHH----HHTTCCEEEEEEEGGGGCCCSSSCBCTTS
T ss_pred             ---cccceEEeeccccccc----ccccchHHHhhhhHHHHHHHHHHH----HHcCCceEEEeecceeecCCCCCCCCCCC
Confidence               4799999999875322    234455667789999999999988    5555689999999765432          


Q ss_pred             -CCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCC---------CC
Q 024994          144 -IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIG---------RA  213 (259)
Q Consensus       144 -~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~  213 (259)
                       ..+...|+.+|.+.+.+++.+++++   ++++..++|+.+++|.....   .....+........++.         -+
T Consensus       144 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~---~~i~~~i~~~~~~~~i~v~~~g~~~r~~  217 (322)
T d1r6da_         144 PLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQHPE---KLIPLFVTNLLDGGTLPLYGDGANVREW  217 (322)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTT---SHHHHHHHHHHTTCCEEEETTSCCEEEE
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEECcCCCcC---cHHHHHHHHHHcCCCcEEecCCCeEEcc
Confidence             2245689999999999999998876   89999999999999864321   11122333443333321         14


Q ss_pred             CCHHHHHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          214 GEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       214 ~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      ...+|+++++..++....   .|+++++.+|...++
T Consensus       218 i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~~~s~  250 (322)
T d1r6da_         218 VHTDDHCRGIALVLAGGR---AGEIYHIGGGLELTN  250 (322)
T ss_dssp             EEHHHHHHHHHHHHHHCC---TTCEEEECCCCEEEH
T ss_pred             EEHHHHHHHHHHHHhCCC---CCCeeEEeecccchh
Confidence            568999999998886433   588999999887764

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.81  E-value=2.1e-18  Score=147.85  Aligned_cols=233  Identities=14%  Similarity=0.068  Sum_probs=162.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHH-CCCEEEEeeC---------ChhHHHHHHHHHHhc--------CCcEEEEEecCCCHH
Q 024994            1 MTALVTGGTRGIGHATVEELAR-FGAIVHTCSR---------NQIELDARLHEWKNK--------GFKVTGSVCDLSSRE   62 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~-~G~~V~~~~r---------~~~~~~~~~~~~~~~--------~~~~~~~~~D~~~~~   62 (259)
                      |+||||||+|.||.+++++|++ .|++|+++|+         ..+..+.....+...        ...+.++.+|++|.+
T Consensus         3 MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~   82 (383)
T d1gy8a_           3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED   82 (383)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHH
Confidence            6899999999999999999986 6899999874         112233333333321        235788899999999


Q ss_pred             HHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccC
Q 024994           63 QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR  142 (259)
Q Consensus        63 ~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~  142 (259)
                      .++++++..     .++|+|||+|+......    ..+.....+++|+.++..+++++    .+.+..++++.+|.....
T Consensus        83 ~l~~~~~~~-----~~~d~ViH~Aa~~~~~~----~~~~~~~~~~~N~~~t~~~l~~~----~~~~~~~~~~~~s~~~~~  149 (383)
T d1gy8a_          83 FLNGVFTRH-----GPIDAVVHMCAFLAVGE----SVRDPLKYYDNNVVGILRLLQAM----LLHKCDKIIFSSSAAIFG  149 (383)
T ss_dssp             HHHHHHHHS-----CCCCEEEECCCCCCHHH----HHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGTB
T ss_pred             Hhhhhhhcc-----ceeehhhcccccccccc----cccccccccccccccccccchhh----hccCCccccccccccccc
Confidence            988888754     57899999999754321    23445567889999999999888    556667888887765432


Q ss_pred             ------------------CCCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCc------h
Q 024994          143 ------------------GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEG------S  198 (259)
Q Consensus       143 ------------------~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~------~  198 (259)
                                        +..+...|+.+|.+.+.+++.+...+   |+++..++|+.+++|...........      +
T Consensus       150 ~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip  226 (383)
T d1gy8a_         150 NPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGAHEDGDIGEHYQGSTHLIP  226 (383)
T ss_dssp             SCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECCCTTSSCSCCSTTCCSHHH
T ss_pred             ccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHh---CCCEEEEecceeeccCccccccccccccchhHH
Confidence                              12245789999999999999998776   89999999999999886543221100      0


Q ss_pred             HHHHhhhh----------------cCC---------------CCCCCCHHHHHHHHHHHhCC------CCCCccccEEEe
Q 024994          199 EFLDGIAR----------------QTP---------------IGRAGEPDEVSSLVAFLCLP------AASYITGQIICV  241 (259)
Q Consensus       199 ~~~~~~~~----------------~~~---------------~~~~~~~~~va~~~~~l~~~------~~~~~~G~~l~~  241 (259)
                      .....+..                ..+               .+-+...+|+++++..++..      ......++++++
T Consensus       227 ~ii~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni  306 (383)
T d1gy8a_         227 IILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNL  306 (383)
T ss_dssp             HHHHHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEE
T ss_pred             HHHHHHHhhccccccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEe
Confidence            01111110                000               01135689999998776631      123456789999


Q ss_pred             CCCceeee
Q 024994          242 DGGVTVTV  249 (259)
Q Consensus       242 dgG~~~~~  249 (259)
                      .+|..+++
T Consensus       307 ~s~~~~s~  314 (383)
T d1gy8a_         307 GTSRGYSV  314 (383)
T ss_dssp             SCSCCEEH
T ss_pred             CCCCceeH
Confidence            99876654

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.80  E-value=2.1e-21  Score=151.13  Aligned_cols=149  Identities=14%  Similarity=0.059  Sum_probs=110.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||++|||+++++.|+++|++|++++|+.+++++..+++.... ++.+..+|++|.+++++++        +++|
T Consensus        24 K~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~--------~~iD   94 (191)
T d1luaa1          24 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF-KVNVTAAETADDASRAEAV--------KGAH   94 (191)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH-TCCCEEEECCSHHHHHHHT--------TTCS
T ss_pred             CEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhcc-chhhhhhhcccHHHHHHHh--------cCcC
Confidence            799999999999999999999999999999999999988888876532 4556789999999887765        5799


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCC-CCCChhhhhhHHHHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-IPSVSLYGAYKGAMNQ  159 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~-~~~~~~Y~~sK~a~~~  159 (259)
                      +||||||..    ....+.++|++.+++|+.+.++....+.+.+... ......+++....-+ ..+...|+++|+++..
T Consensus        95 ilin~Ag~g----~~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~g~~~y~~sk~a~~~  169 (191)
T d1luaa1          95 FVFTAGAIG----LELLPQAAWQNESSIEIVADYNAQPPLGIGGIDA-TDKGKEYGGKRAFGALGIGGLKLKLHRACIAK  169 (191)
T ss_dssp             EEEECCCTT----CCCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCT-TCEEEEETTEEEECHHHHHHHHHHHHHHHHHH
T ss_pred             eeeecCccc----cccCCHHHHHhhhcceeehhHhhHHHHHHHhhhh-ccCcEEecceEEEeccCcCcHHHHHHHHHHHH
Confidence            999999963    3456899999999999888776654432222221 122233333222111 1234579999999987


Q ss_pred             HHHH
Q 024994          160 LTKN  163 (259)
Q Consensus       160 ~~~~  163 (259)
                      |+++
T Consensus       170 l~~s  173 (191)
T d1luaa1         170 LFES  173 (191)
T ss_dssp             HTSC
T ss_pred             HHhc
Confidence            7643

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=6.4e-18  Score=132.56  Aligned_cols=195  Identities=12%  Similarity=0.025  Sum_probs=132.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+++||||||+||.+++++|+++|+.|.++.|+.+++...      ...++.++.+|++|.+++.++++        ..|
T Consensus         4 kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~------~~~~~~~~~gD~~d~~~l~~al~--------~~d   69 (205)
T d1hdoa_           4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE------GPRPAHVVVGDVLQAADVDKTVA--------GQD   69 (205)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS------SCCCSEEEESCTTSHHHHHHHHT--------TCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc------cccccccccccccchhhHHHHhc--------CCC
Confidence            7899999999999999999999999999999998875432      13468889999999999887763        689


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCC----ChhhhhhHHH
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPS----VSLYGAYKGA  156 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~----~~~Y~~sK~a  156 (259)
                      +||+++|........           +++..++.++++++    ++.+-.++|++||.......+.    ...|...|..
T Consensus        70 ~vi~~~g~~~~~~~~-----------~~~~~~~~~l~~aa----~~~~v~r~i~~ss~~~~~~~~~~~~~~~~~~~~~~~  134 (205)
T d1hdoa_          70 AVIVLLGTRNDLSPT-----------TVMSEGARNIVAAM----KAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIR  134 (205)
T ss_dssp             EEEECCCCTTCCSCC-----------CHHHHHHHHHHHHH----HHHTCCEEEEECCGGGTSCTTCSCGGGHHHHHHHHH
T ss_pred             EEEEEeccCCchhhh-----------hhhHHHHHHHHHHH----HhcCCCeEEEEeeeeccCCCccccccccccchHHHH
Confidence            999999975332111           13344555555444    6666789999999765443322    2344555555


Q ss_pred             HHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCccc
Q 024994          157 MNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG  236 (259)
Q Consensus       157 ~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G  236 (259)
                      .+.+       +...+++.+.|+||.+..........         ..........+.+.+|+|+.++..+...  ...|
T Consensus       135 ~e~~-------l~~~~~~~tiirp~~~~~~~~~~~~~---------~~~~~~~~~~~i~~~DvA~~~~~~l~~~--~~~g  196 (205)
T d1hdoa_         135 MHKV-------LRESGLKYVAVMPPHIGDQPLTGAYT---------VTLDGRGPSRVISKHDLGHFMLRCLTTD--EYDG  196 (205)
T ss_dssp             HHHH-------HHHTCSEEEEECCSEEECCCCCSCCE---------EESSSCSSCSEEEHHHHHHHHHHTTSCS--TTTT
T ss_pred             HHHH-------HHhcCCceEEEecceecCCCCcccEE---------EeeCCCCCCCcCCHHHHHHHHHHHhCCC--CCCC
Confidence            5433       33468999999999885432211100         0001112233567899999999888543  3557


Q ss_pred             cEEEeC
Q 024994          237 QIICVD  242 (259)
Q Consensus       237 ~~l~~d  242 (259)
                      +.+.+.
T Consensus       197 ~~~~~s  202 (205)
T d1hdoa_         197 HSTYPS  202 (205)
T ss_dssp             CEEEEE
T ss_pred             EEEecC
Confidence            777654

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.79  E-value=3.5e-19  Score=150.66  Aligned_cols=220  Identities=17%  Similarity=0.084  Sum_probs=148.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCC--hhHH-HHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRN--QIEL-DARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG   77 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~--~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (259)
                      |+||||||||.||.+++++|.++|+.|.+++++  .... ......  ....++.++.+|++|.+.+..+++        
T Consensus         3 mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~--~~~~~i~~~~~Di~d~~~~~~~~~--------   72 (346)
T d1oc2a_           3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEA--ILGDRVELVVGDIADAELVDKLAA--------   72 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGG--GCSSSEEEEECCTTCHHHHHHHHT--------
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHH--hhcCCeEEEEccCCCHHHHHHHHh--------
Confidence            789999999999999999999999865444432  1110 000000  124589999999999999888763        


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCC--------------
Q 024994           78 KLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG--------------  143 (259)
Q Consensus        78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~--------------  143 (259)
                      ..|.++|.|+......    ..++.++.+++|+.++..++..+    ... +.++|++||...+..              
T Consensus        73 ~~~~v~~~a~~~~~~~----~~~~~~~~~~~N~~g~~nll~~~----~~~-~~k~i~~ss~~vyg~~~~~~~~~~~~~~~  143 (346)
T d1oc2a_          73 KADAIVHYAAESHNDN----SLNDPSPFIHTNFIGTYTLLEAA----RKY-DIRFHHVSTDEVYGDLPLREDLPGHGEGP  143 (346)
T ss_dssp             TCSEEEECCSCCCHHH----HHHCCHHHHHHHTHHHHHHHHHH----HHH-TCEEEEEEEGGGGCCBCCGGGSTTTTCST
T ss_pred             hhhhhhhhhhcccccc----hhhCcccceeeehHhHHhhhhhh----ccc-cccccccccceEecccCccccccccccCc
Confidence            6788999998753321    22344677889999999998877    333 357888887654311              


Q ss_pred             ---------CCCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCC----
Q 024994          144 ---------IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPI----  210 (259)
Q Consensus       144 ---------~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~----  210 (259)
                               ..+...|+.+|.+.+.+++.+..++   +++++.++|+.+++|.....   ..............+.    
T Consensus       144 ~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~vyGp~~~~~---~~~~~~i~~~~~~~~~~i~~  217 (346)
T d1oc2a_         144 GEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQHIE---KFIPRQITNILAGIKPKLYG  217 (346)
T ss_dssp             TSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCCTT---SHHHHHHHHHHHTCCCEEET
T ss_pred             ccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCEEEEeecceeCCCCCcc---chhHHHHHHHHcCCceeEeC
Confidence                     1134679999999999999998776   89999999999999753211   1111122222222221    


Q ss_pred             -----CCCCCHHHHHHHHHHHhCCCCCCccccEEEeCCCceee
Q 024994          211 -----GRAGEPDEVSSLVAFLCLPAASYITGQIICVDGGVTVT  248 (259)
Q Consensus       211 -----~~~~~~~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~  248 (259)
                           ..+...+|+++++..++...   ..|..+++.++...+
T Consensus       218 ~g~~~r~~i~v~D~a~a~~~~~~~~---~~~~~~~~~~~~~~~  257 (346)
T d1oc2a_         218 EGKNVRDWIHTNDHSTGVWAILTKG---RMGETYLIGADGEKN  257 (346)
T ss_dssp             TSCCEEECEEHHHHHHHHHHHHHHC---CTTCEEEECCSCEEE
T ss_pred             CCCccccccchhhHHHHHHHHHhhc---ccCcccccccccccc
Confidence                 12456899999988777533   245666666665543

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.79  E-value=3.9e-18  Score=142.12  Aligned_cols=153  Identities=12%  Similarity=0.082  Sum_probs=122.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+||||||+|.||.+++++|+++|+.|+++++..                    ++|+.+.+.+..+++.      .++|
T Consensus         3 kkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~--------------------~~~~~~~~~~~~~~~~------~~~d   56 (315)
T d1e6ua_           3 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD--------------------ELNLLDSRAVHDFFAS------ERID   56 (315)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT--------------------TCCTTCHHHHHHHHHH------HCCS
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch--------------------hccccCHHHHHHHHhh------cCCC
Confidence            6899999999999999999999999998876532                    2689999888887763      3799


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCC----------------
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI----------------  144 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~----------------  144 (259)
                      .++|+|+......   ....+..+.+++|+.++..+++++    .+.+..++|++||.+.+.+.                
T Consensus        57 ~v~~~a~~~~~~~---~~~~~~~~~~~~Nv~gt~~ll~~a----~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~  129 (315)
T d1e6ua_          57 QVYLAAAKVGGIV---ANNTYPADFIYQNMMIESNIIHAA----HQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLE  129 (315)
T ss_dssp             EEEECCCCCCCHH---HHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCC
T ss_pred             EEEEcchhccccc---cchhhHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEECCceEcCCCCCCCccCCccccCCCC
Confidence            9999997653211   124455667889999999999888    55556799999997765321                


Q ss_pred             CCChhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCC
Q 024994          145 PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK  189 (259)
Q Consensus       145 ~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~  189 (259)
                      ++...|+.||.+.+.+++.+..++   |+++..++|+.+.+|...
T Consensus       130 ~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyGp~~~  171 (315)
T d1e6ua_         130 PTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHDN  171 (315)
T ss_dssp             GGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTCC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCCC
Confidence            123579999999999999998877   899999999999998654

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.73  E-value=3.4e-17  Score=130.50  Aligned_cols=215  Identities=13%  Similarity=0.046  Sum_probs=141.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC--EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      +|||||||+|+||++++++|+++|+  .|+.+.|+.++.+..       ..++.++.+|+++.++..+++        ..
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~-------~~~~~~~~~d~~~~~~~~~~~--------~~   68 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-------GGEADVFIGDITDADSINPAF--------QG   68 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-------TCCTTEEECCTTSHHHHHHHH--------TT
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhc-------cCCcEEEEeeecccccccccc--------cc
Confidence            6999999999999999999999996  466678888665432       346778899999999988776        36


Q ss_pred             ccEEEEcCCCCCCCC---------CCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChh
Q 024994           79 LNILINNAAIAFVKP---------TVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSL  149 (259)
Q Consensus        79 id~vi~~ag~~~~~~---------~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~  149 (259)
                      +|.+||+++......         ........+.....+|+.++..+....    .....+.....++.....+..+...
T Consensus        69 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~s~~~~~~~~~~~~~  144 (252)
T d2q46a1          69 IDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAA----KVAGVKHIVVVGSMGGTNPDHPLNK  144 (252)
T ss_dssp             CSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHH----HHHTCSEEEEEEETTTTCTTCGGGG
T ss_pred             ceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccc----ccccccccccccccccCCCCccccc
Confidence            899999998653211         111112334556678999988887665    3344578888888776655444333


Q ss_pred             hhhhHH-HHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCCCCCCHHHHHHHHHHHhC
Q 024994          150 YGAYKG-AMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCL  228 (259)
Q Consensus       150 Y~~sK~-a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  228 (259)
                      +..++. ....+...+.   ...++++..++|+.+.++...........   ....  ......+.+.+|+|++++..+.
T Consensus       145 ~~~~~~~~~~~~~~~~~---~~~~~~~~ilRp~~v~g~~~~~~~~~~~~---~~~~--~~~~~~~i~~~Dva~a~~~~l~  216 (252)
T d2q46a1         145 LGNGNILVWKRKAEQYL---ADSGTPYTIIRAGGLLDKEGGVRELLVGK---DDEL--LQTDTKTVPRADVAEVCIQALL  216 (252)
T ss_dssp             GGGCCHHHHHHHHHHHH---HHSSSCEEEEEECEEECSCTTSSCEEEES---TTGG--GGSSCCEEEHHHHHHHHHHHTT
T ss_pred             ccccchhhhhhhhhhhh---hcccccceeecceEEECCCcchhhhhhcc---Cccc--ccCCCCeEEHHHHHHHHHHHhC
Confidence            333332 2222223332   23589999999999988865432110000   0000  0111235578999999998885


Q ss_pred             CCCCCccccEEEeCCC
Q 024994          229 PAASYITGQIICVDGG  244 (259)
Q Consensus       229 ~~~~~~~G~~l~~dgG  244 (259)
                      ..  ...|+++++.++
T Consensus       217 ~~--~~~g~~~~i~~~  230 (252)
T d2q46a1         217 FE--EAKNKAFDLGSK  230 (252)
T ss_dssp             CG--GGTTEEEEEEEC
T ss_pred             Cc--cccCcEEEEeeC
Confidence            43  357899998654

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.73  E-value=4.3e-17  Score=137.82  Aligned_cols=211  Identities=17%  Similarity=0.106  Sum_probs=147.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+||||||+|.||.+++++|+++|+.|++++|+........+.. .....+.++.+|++|.+.+.++++..      .+|
T Consensus         9 KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~i~~~~~Dl~d~~~l~~~~~~~------~~~   81 (356)
T d1rkxa_           9 KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETA-RVADGMQSEIGDIRDQNKLLESIREF------QPE   81 (356)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHT-TTTTTSEEEECCTTCHHHHHHHHHHH------CCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhh-hcccCCeEEEeeccChHhhhhhhhhc------hhh
Confidence            79999999999999999999999999999999876544433322 22346889999999999988887753      799


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCCCccC------------CCCCC
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVR------------GIPSV  147 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~~~~~------------~~~~~  147 (259)
                      +++|+|+.....    .+.+..+..+++|+.++..+++++    .+.+ ...++..||.....            +..+.
T Consensus        82 ~v~~~aa~~~~~----~~~~~~~~~~~~Nv~g~~n~l~~~----~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~  153 (356)
T d1rkxa_          82 IVFHMAAQPLVR----LSYSEPVETYSTNVMGTVYLLEAI----RHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGY  153 (356)
T ss_dssp             EEEECCSCCCHH----HHHHCHHHHHHHHTHHHHHHHHHH----HHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCS
T ss_pred             hhhhhhcccccc----ccccCCccccccccccchhhhhhh----hccccccccccccccccccccccccccccccccCCC
Confidence            999999964321    234556778899999999999887    3333 34444444433221            12246


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHc------cCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCC--------CCC
Q 024994          148 SLYGAYKGAMNQLTKNLACEWA------KDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPI--------GRA  213 (259)
Q Consensus       148 ~~Y~~sK~a~~~~~~~~a~e~~------~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~  213 (259)
                      ..|+.+|...+.+++.++.++.      ..++.+..++|+.+++|......  .-............+.        ..+
T Consensus       154 ~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~  231 (356)
T d1rkxa_         154 DPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALD--RIVPDILRAFEQSQPVIIRNPHAIRPW  231 (356)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSS--CHHHHHHHHHHTTCCEECSCTTCEECC
T ss_pred             CccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhh--HHHHHHHHHHhCCCceEEeeccccccc
Confidence            7799999999999999988753      23788999999999987642211  1111122333333221        113


Q ss_pred             CCHHHHHHHHHHHhC
Q 024994          214 GEPDEVSSLVAFLCL  228 (259)
Q Consensus       214 ~~~~~va~~~~~l~~  228 (259)
                      ...+|++.++..++.
T Consensus       232 ~~v~D~~~a~~~~~~  246 (356)
T d1rkxa_         232 QHVLEPLSGYLLLAQ  246 (356)
T ss_dssp             EETHHHHHHHHHHHH
T ss_pred             cccccccchhhhhhh
Confidence            457899998776664

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=1.8e-17  Score=132.40  Aligned_cols=192  Identities=16%  Similarity=0.163  Sum_probs=132.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC--EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |+||||||||.||.+++++|+++|.  +|++++|+......      ....++....+|+.+.+++.+.+        ..
T Consensus        15 k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~------~~~~~i~~~~~D~~~~~~~~~~~--------~~   80 (232)
T d2bkaa1          15 KSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE------EAYKNVNQEVVDFEKLDDYASAF--------QG   80 (232)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS------GGGGGCEEEECCGGGGGGGGGGG--------SS
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcc------cccceeeeeeecccccccccccc--------cc
Confidence            6899999999999999999999996  89999997654322      11236677778888766554433        46


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      .|++||++|..       ..........++|+.++..+++.+    .+.+-.++|++|+......  ....|+.+|...+
T Consensus        81 ~d~vi~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~a----~~~~v~~fi~~Ss~~~~~~--~~~~Y~~~K~~~E  147 (232)
T d2bkaa1          81 HDVGFCCLGTT-------RGKAGAEGFVRVDRDYVLKSAELA----KAGGCKHFNLLSSKGADKS--SNFLYLQVKGEVE  147 (232)
T ss_dssp             CSEEEECCCCC-------HHHHHHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEECCTTCCTT--CSSHHHHHHHHHH
T ss_pred             ccccccccccc-------ccccchhhhhhhcccccceeeecc----cccCccccccCCccccccC--ccchhHHHHHHhh
Confidence            89999999853       123445567789999999998887    5566789999999876433  3467999999888


Q ss_pred             HHHHHHHHHHccCCc-eEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCC----CCCCCHHHHHHHHHHHhCCC
Q 024994          159 QLTKNLACEWAKDNI-RTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPI----GRAGEPDEVSSLVAFLCLPA  230 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi-~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~va~~~~~l~~~~  230 (259)
                      ...+.       .+. ++..++||.+.++....-    ........+....+.    ....+++|+|++++..+...
T Consensus       148 ~~l~~-------~~~~~~~IlRP~~i~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~I~~~dvA~a~i~~~~~~  213 (232)
T d2bkaa1         148 AKVEE-------LKFDRYSVFRPGVLLCDRQESR----PGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRP  213 (232)
T ss_dssp             HHHHT-------TCCSEEEEEECCEEECTTGGGS----HHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSC
T ss_pred             hcccc-------ccccceEEecCceeecCCCcCc----HHHHHHHHHhhccCCcccCCCeEEHHHHHHHHHHHHhcC
Confidence            54433       244 578899999988754321    111112222222221    12346799999988777544

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.59  E-value=1.2e-14  Score=118.46  Aligned_cols=196  Identities=18%  Similarity=0.102  Sum_probs=134.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||||.||.+++++|.++|+.|+.++|+.                     +|++|.++++++++..      ++|
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~---------------------~D~~d~~~~~~~l~~~------~~d   54 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD---------------------LDITNVLAVNKFFNEK------KPN   54 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT---------------------CCTTCHHHHHHHHHHH------CCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh---------------------ccCCCHHHHHHHHHHc------CCC
Confidence            5799999999999999999999999999999853                     5899999988888753      789


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccC-----------CCCCChh
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR-----------GIPSVSL  149 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~-----------~~~~~~~  149 (259)
                      +|||+|+.....    ......+..+..|+.....+....    ... ...+++.||.....           +..+...
T Consensus        55 ~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~~~~----~~~-~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~  125 (281)
T d1vl0a_          55 VVINCAAHTAVD----KCEEQYDLAYKINAIGPKNLAAAA----YSV-GAEIVQISTDYVFDGEAKEPITEFDEVNPQSA  125 (281)
T ss_dssp             EEEECCCCCCHH----HHHHCHHHHHHHHTHHHHHHHHHH----HHH-TCEEEEEEEGGGSCSCCSSCBCTTSCCCCCSH
T ss_pred             EEEeeccccccc----cccccchhhccccccccccccccc----ccc-cccccccccceeeeccccccccccccccchhh
Confidence            999999964321    123344566777887777776655    222 35666666654321           1234567


Q ss_pred             hhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCC-------CCCCCHHHHHHH
Q 024994          150 YGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPI-------GRAGEPDEVSSL  222 (259)
Q Consensus       150 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~va~~  222 (259)
                      |+.+|...+.+.+..       +.+...++|+++.++....      ............+.       ..+...+|++++
T Consensus       126 ~~~~k~~~e~~~~~~-------~~~~~i~R~~~vyG~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~  192 (281)
T d1vl0a_         126 YGKTKLEGENFVKAL-------NPKYYIVRTAWLYGDGNNF------VKTMINLGKTHDELKVVHDQVGTPTSTVDLARV  192 (281)
T ss_dssp             HHHHHHHHHHHHHHH-------CSSEEEEEECSEESSSSCH------HHHHHHHHHHCSEEEEESSCEECCEEHHHHHHH
T ss_pred             hhhhhhHHHHHHHHh-------CCCccccceeEEeCCCccc------ccchhhhhccCCceeecCCceeccchhhhhhhh
Confidence            888888877655432       6788899999998875321      11122222222211       235578999999


Q ss_pred             HHHHhCCCCCCccccEEEeCCCceeee
Q 024994          223 VAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       223 ~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      +.+++...   .+| .+++.++..++.
T Consensus       193 ~~~~~~~~---~~g-~~~~~~~~~~s~  215 (281)
T d1vl0a_         193 VLKVIDEK---NYG-TFHCTCKGICSW  215 (281)
T ss_dssp             HHHHHHHT---CCE-EEECCCBSCEEH
T ss_pred             hhhhhhhc---ccC-ceeEeCCCccch
Confidence            99988543   245 677777776653

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.54  E-value=8e-15  Score=115.03  Aligned_cols=187  Identities=13%  Similarity=0.126  Sum_probs=120.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC--EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|||||||.||++++++|.++|+  .|+...|+....          ..++   ..+..|..++.       +.....
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~----------~~~~---~~~~~d~~~~~-------~~~~~~   62 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE----------HPRL---DNPVGPLAELL-------PQLDGS   62 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC----------CTTE---ECCBSCHHHHG-------GGCCSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh----------cccc---cccccchhhhh-------hccccc
Confidence            7999999999999999999999997  677777754221          1123   34444544322       222256


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHHH
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN  158 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~~  158 (259)
                      +|.+|+++|.....      ...-+...++|+.++..+++++    ++.+..+++++||..+..  .....|..+|...+
T Consensus        63 ~d~vi~~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~a----~~~~v~~~i~~Ss~~~~~--~~~~~y~~~K~~~E  130 (212)
T d2a35a1          63 IDTAFCCLGTTIKE------AGSEEAFRAVDFDLPLAVGKRA----LEMGARHYLVVSALGADA--KSSIFYNRVKGELE  130 (212)
T ss_dssp             CSEEEECCCCCHHH------HSSHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEECCTTCCT--TCSSHHHHHHHHHH
T ss_pred             hheeeeeeeeeccc------cccccccccchhhhhhhccccc----cccccccccccccccccc--ccccchhHHHHHHh
Confidence            99999999864211      1123457789999999998887    666678999999977643  34567999998887


Q ss_pred             HHHHHHHHHHccCCc-eEEEEeCCceeCCCCCCCcCCCCchHHHHhhhhcCCCC--CCCCHHHHHHHHHHHhCCCC
Q 024994          159 QLTKNLACEWAKDNI-RTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIG--RAGEPDEVSSLVAFLCLPAA  231 (259)
Q Consensus       159 ~~~~~~a~e~~~~gi-~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~va~~~~~l~~~~~  231 (259)
                      ...+       ..+. +++.++|+.+.++........     ...........+  +....+|+|+++..++..+.
T Consensus       131 ~~l~-------~~~~~~~~I~Rp~~v~G~~~~~~~~~-----~~~~~~~~~~~~~~~~i~v~DvA~ai~~~~~~~~  194 (212)
T d2a35a1         131 QALQ-------EQGWPQLTIARPSLLFGPREEFRLAE-----ILAAPIARILPGKYHGIEACDLARALWRLALEEG  194 (212)
T ss_dssp             HHHT-------TSCCSEEEEEECCSEESTTSCEEGGG-----GTTCCCC----CHHHHHHHHHHHHHHHHHHTCCC
T ss_pred             hhcc-------ccccccceeeCCcceeCCcccccHHH-----HHHHHHhhccCCCCcEEEHHHHHHHHHHHHcCCC
Confidence            5443       2344 688899999988754211000     000000000001  12457999999999886543

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.53  E-value=5.4e-14  Score=115.83  Aligned_cols=212  Identities=14%  Similarity=0.064  Sum_probs=125.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHH--H--HHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIEL--D--ARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ   76 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~--~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (259)
                      ++||||||||.||++++++|.++|++|++++|+....  .  .....+.  ..++.++++|++|.+.+.+.+        
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~--~~~v~~v~~d~~d~~~~~~~~--------   73 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFK--QLGAKLIEASLDDHQRLVDAL--------   73 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHH--TTTCEEECCCSSCHHHHHHHH--------
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhc--cCCcEEEEeecccchhhhhhc--------
Confidence            4799999999999999999999999999999975422  1  1112222  346888999999998877766        


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCC-----CCChhhh
Q 024994           77 GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI-----PSVSLYG  151 (259)
Q Consensus        77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~-----~~~~~Y~  151 (259)
                      ...+.++++++.....               .|..+...++.++    .+....++++.||.+.....     .+...|.
T Consensus        74 ~~~~~~~~~~~~~~~~---------------~~~~~~~~~l~~a----~~~~~~~~v~~Ss~g~~~~~~~~~~~~~~~~~  134 (312)
T d1qyda_          74 KQVDVVISALAGGVLS---------------HHILEQLKLVEAI----KEAGNIKRFLPSEFGMDPDIMEHALQPGSITF  134 (312)
T ss_dssp             TTCSEEEECCCCSSSS---------------TTTTTHHHHHHHH----HHSCCCSEEECSCCSSCTTSCCCCCSSTTHHH
T ss_pred             cCcchhhhhhhhcccc---------------cchhhhhHHHHHH----HHhcCCcEEEEeeccccCCCcccccchhhhhh
Confidence            3678889888754221               2333444444444    44556677777775433221     2223344


Q ss_pred             hhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCC----chHHHHhhhhcCCCCCCCCHHHHHHHHHHHh
Q 024994          152 AYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPE----GSEFLDGIARQTPIGRAGEPDEVSSLVAFLC  227 (259)
Q Consensus       152 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  227 (259)
                      .+|..+    ..+..   ..++.+..++|+.+..+..........    .......+........+...+|+++++..++
T Consensus       135 ~~~~~~----~~~~~---~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l  207 (312)
T d1qyda_         135 IDKRKV----RRAIE---AASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSI  207 (312)
T ss_dssp             HHHHHH----HHHHH---HTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHT
T ss_pred             HHHHHH----HHhhc---ccccceEEeccceeecCCccchhhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHh
Confidence            444443    33322   347888999999886654322211000    0000000000011112557899999998888


Q ss_pred             CCCCCCccccEEEeCCCceeee
Q 024994          228 LPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       228 ~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      ... ....+.++++.++..+|.
T Consensus       208 ~~~-~~~~~~~~~~~~~~~~s~  228 (312)
T d1qyda_         208 DDP-QTLNKTMYIRPPMNILSQ  228 (312)
T ss_dssp             TCG-GGSSSEEECCCGGGEEEH
T ss_pred             cCc-cccCceEEEeCCCcCCCH
Confidence            543 233344556666666553

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.51  E-value=7.4e-14  Score=114.32  Aligned_cols=214  Identities=9%  Similarity=0.032  Sum_probs=125.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHH--HHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDA--RLHEWKN-KGFKVTGSVCDLSSREQREKLIETVTSIFQG   77 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~--~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (259)
                      |+||||||||.||++++++|+++|++|++++|+......  ....+.. ....+.++.+|+.+.....+.++        
T Consensus         4 kKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--------   75 (307)
T d1qyca_           4 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK--------   75 (307)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH--------
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhh--------
Confidence            689999999999999999999999999999997543211  1111111 13467888999999988777664        


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHHH
Q 024994           78 KLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAM  157 (259)
Q Consensus        78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a~  157 (259)
                      ..+.++++++...                   ..+...+.+++    ......++++.||............+...+...
T Consensus        76 ~~~~vi~~~~~~~-------------------~~~~~~~~~a~----~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~  132 (307)
T d1qyca_          76 NVDVVISTVGSLQ-------------------IESQVNIIKAI----KEVGTVKRFFPSEFGNDVDNVHAVEPAKSVFEV  132 (307)
T ss_dssp             TCSEEEECCCGGG-------------------SGGGHHHHHHH----HHHCCCSEEECSCCSSCTTSCCCCTTHHHHHHH
T ss_pred             hceeeeecccccc-------------------cchhhHHHHHH----HHhccccceeeeccccccccccccccccccccc
Confidence            5789999887531                   22222333333    333456677777654433333333334333333


Q ss_pred             HHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCc---hHHHHhhhhcCCCCCCCCHHHHHHHHHHHhCCCCCCc
Q 024994          158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEG---SEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYI  234 (259)
Q Consensus       158 ~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~  234 (259)
                      ......+..+   .+++.+.++|+++..+...........   ...............+...+|+++++..++... ...
T Consensus       133 ~~~~~~~~~~---~~~~~~i~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~-~~~  208 (307)
T d1qyca_         133 KAKVRRAIEA---EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDP-RTL  208 (307)
T ss_dssp             HHHHHHHHHH---HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCG-GGT
T ss_pred             cccccchhhc---cCCCceecccceecCCCccchhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcCh-hhc
Confidence            3333333333   378899999999977654332111000   000000001111122557899999998887533 233


Q ss_pred             cccEEEeCCCceeee
Q 024994          235 TGQIICVDGGVTVTV  249 (259)
Q Consensus       235 ~G~~l~~dgG~~~~~  249 (259)
                      .+..+++.++..+|.
T Consensus       209 ~~~~~~~~~~~~~s~  223 (307)
T d1qyca_         209 NKTLYLRLPANTLSL  223 (307)
T ss_dssp             TEEEECCCGGGEEEH
T ss_pred             CceeEEeCCCCccCH
Confidence            444556666776653

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.44  E-value=6.3e-13  Score=111.77  Aligned_cols=209  Identities=15%  Similarity=0.022  Sum_probs=127.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHH-HHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQ-REKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~~~~i   79 (259)
                      |+|+||||||.||.+++++|+++|++|+++.|+.++...  ..+.. ..++.++++|+.|..+ ++.++        ...
T Consensus         4 ktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~~-~~~v~~~~gD~~d~~~~~~~a~--------~~~   72 (350)
T d1xgka_           4 KTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQA-IPNVTLFQGPLLNNVPLMDTLF--------EGA   72 (350)
T ss_dssp             CCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHHT-STTEEEEESCCTTCHHHHHHHH--------TTC
T ss_pred             CEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhcc-cCCCEEEEeeCCCcHHHHHHHh--------cCC
Confidence            799999999999999999999999999999998776533  12222 3468899999998654 33332        467


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCC--CCCChhhhhhHHHH
Q 024994           80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG--IPSVSLYGAYKGAM  157 (259)
Q Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~--~~~~~~Y~~sK~a~  157 (259)
                      |.++.+......                .++.....++.++    .+.+..+++..||......  ......|..+|...
T Consensus        73 ~~~~~~~~~~~~----------------~~~~~~~~~~~aa----~~agv~~~v~~Ss~~~~~~~~~~~~~~~~~~k~~~  132 (350)
T d1xgka_          73 HLAFINTTSQAG----------------DEIAIGKDLADAA----KRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTV  132 (350)
T ss_dssp             SEEEECCCSTTS----------------CHHHHHHHHHHHH----HHHSCCSEEEEEECCCGGGTSSCCCCTTTHHHHHH
T ss_pred             ceEEeecccccc----------------hhhhhhhHHHHHH----HHhCCCceEEEeeccccccCCcccchhhhhhHHHH
Confidence            887776543211                1233334455554    4445567888888654332  23345566777766


Q ss_pred             HHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCCchHHHHh-hhhcCCCCC-----CCC-HHHHHHHHHHHhCCC
Q 024994          158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDG-IARQTPIGR-----AGE-PDEVSSLVAFLCLPA  230 (259)
Q Consensus       158 ~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----~~~-~~~va~~~~~l~~~~  230 (259)
                      +.+.++       .++....++|+.+..+................. .....|...     +.+ .+|+++++..++.+.
T Consensus       133 ~~~~~~-------~~~~~~~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~  205 (350)
T d1xgka_         133 ENYVRQ-------LGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDG  205 (350)
T ss_dssp             HHHHHT-------SSSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHC
T ss_pred             HHHHHh-------hccCceeeeeceeeccccccccccccccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCC
Confidence            544332       367888999998766543222111110000000 000111110     122 478999998888655


Q ss_pred             CCCccccEEEeCCCceee
Q 024994          231 ASYITGQIICVDGGVTVT  248 (259)
Q Consensus       231 ~~~~~G~~l~~dgG~~~~  248 (259)
                      .....|+.+++.|. .+|
T Consensus       206 ~~~~~G~~~~~~g~-~~T  222 (350)
T d1xgka_         206 PQKWNGHRIALTFE-TLS  222 (350)
T ss_dssp             HHHHTTCEEEECSE-EEC
T ss_pred             hhhcCCeEEEEeCC-cCC
Confidence            45568999999764 444

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.44  E-value=3.6e-13  Score=110.11  Aligned_cols=130  Identities=19%  Similarity=0.222  Sum_probs=95.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|||||+|.||.+++++|.++|..|.+..++.+                  +.+|++|.+.++++++..      ++|
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g~~v~~~~~~~~------------------~~~Dl~~~~~~~~~i~~~------~~D   56 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKE------------------FCGDFSNPKGVAETVRKL------RPD   56 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTSEEEEECTTCSS------------------SCCCTTCHHHHHHHHHHH------CCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEECCCcc------------------ccCcCCCHHHHHHHHHHc------CCC
Confidence            68999999999999999999999975554433321                  247999999988888754      699


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCC-----------CCCChh
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-----------IPSVSL  149 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~-----------~~~~~~  149 (259)
                      +|||+||........    +.-+..++.|+.++..+.+++    .+. +.+++++||.....+           ..+...
T Consensus        57 ~Vih~Aa~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~----~~~-~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~  127 (298)
T d1n2sa_          57 VIVNAAAHTAVDKAE----SEPELAQLLNATSVEAIAKAA----NET-GAWVVHYSTDYVFPGTGDIPWQETDATSPLNV  127 (298)
T ss_dssp             EEEECCCCCCHHHHT----TCHHHHHHHHTHHHHHHHHHH----TTT-TCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSH
T ss_pred             EEEEecccccccccc----cCccccccccccccccchhhh----hcc-ccccccccccccccCCCCCCCccccccCCCch
Confidence            999999976432222    233566789999999998887    333 578888888654322           124568


Q ss_pred             hhhhHHHHHHHHHH
Q 024994          150 YGAYKGAMNQLTKN  163 (259)
Q Consensus       150 Y~~sK~a~~~~~~~  163 (259)
                      |+.+|.+.+.+.+.
T Consensus       128 y~~~k~~~e~~~~~  141 (298)
T d1n2sa_         128 YGKTKLAGEKALQD  141 (298)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HhhhhhhhhhhHHh
Confidence            99999988866543

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.38  E-value=2.7e-12  Score=105.16  Aligned_cols=216  Identities=13%  Similarity=0.123  Sum_probs=130.5

Q ss_pred             EEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChh--HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc-CCC
Q 024994            3 ALVTGGTRGIGHATVEELARFGA-IVHTCSRNQI--ELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIF-QGK   78 (259)
Q Consensus         3 ~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~   78 (259)
                      ||||||+|.||.+++++|+++|+ .|+++++-..  +....    .+..      .+|..+.+.   ..+...... ...
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~----~~~~------~~~~~~~~~---~~~~~~~~~~~~~   68 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNL----VDLN------IADYMDKED---FLIQIMAGEEFGD   68 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHH----HTSC------CSEEEEHHH---HHHHHHTTCCCSS
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcc----cccc------hhhhccchH---HHHHHhhhhcccc
Confidence            79999999999999999999996 6888763222  12111    1111      123333333   233332211 146


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCC-----------CCCC
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-----------IPSV  147 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~-----------~~~~  147 (259)
                      +++++|.|+.....   ..   ..+...+.|+.+...+++++    ...+ -++++.||.....+           .++.
T Consensus        69 ~~~i~~~aa~~~~~---~~---~~~~~~~~~~~~~~~~l~~~----~~~~-i~~v~~ss~~~~~~~~~~~~~~~~~~~~~  137 (307)
T d1eq2a_          69 VEAIFHEGACSSTT---EW---DGKYMMDNNYQYSKELLHYC----LERE-IPFLYASSAATYGGRTSDFIESREYEKPL  137 (307)
T ss_dssp             CCEEEECCSCCCTT---CC---CHHHHHHHTHHHHHHHHHHH----HHHT-CCEEEEEEGGGGTTCCSCBCSSGGGCCCS
T ss_pred             hhhhhhhccccccc---cc---cccccccccccccccccccc----cccc-ccccccccccccccccccccccccccccc
Confidence            88999999854322   11   23445677888888887766    3332 34555555544322           2346


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHccCCceEEEEeCCceeCCCCCCCcCCCC-chHHHHhhhhcC-C---------CCCCCCH
Q 024994          148 SLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPE-GSEFLDGIARQT-P---------IGRAGEP  216 (259)
Q Consensus       148 ~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~-~~~~~~~~~~~~-~---------~~~~~~~  216 (259)
                      ..|+.+|.+.+.+++.+...   .++.+..++|..+++|.......... .......+.... +         ...+...
T Consensus       138 ~~Y~~~K~~~e~~~~~~~~~---~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v  214 (307)
T d1eq2a_         138 NVYGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYV  214 (307)
T ss_dssp             SHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEH
T ss_pred             cccccccchhhhhccccccc---cccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeec
Confidence            78999999999999988544   48999999999999986643221111 111222222211 1         1124467


Q ss_pred             HHHHHHHHHHhCCCCCCccccEEEeCCCceeee
Q 024994          217 DEVSSLVAFLCLPAASYITGQIICVDGGVTVTV  249 (259)
Q Consensus       217 ~~va~~~~~l~~~~~~~~~G~~l~~dgG~~~~~  249 (259)
                      +|++.++..++...    ....+++.+|...++
T Consensus       215 ~d~~~~~~~~~~~~----~~~~~~~~~~~~~si  243 (307)
T d1eq2a_         215 GDVADVNLWFLENG----VSGIFNLGTGRAESF  243 (307)
T ss_dssp             HHHHHHHHHHHHHC----CCEEEEESCSCCBCH
T ss_pred             ccHHHHHHHHhhhc----cccccccccccchhH
Confidence            89999988777543    234788888876654

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.17  E-value=6.5e-16  Score=119.69  Aligned_cols=47  Identities=26%  Similarity=0.402  Sum_probs=43.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK   47 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~   47 (259)
                      |++.|+||+|++|+++|+.|+++|++|++.+|++++++.+.+++.+.
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~   47 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRI   47 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc
Confidence            67889999999999999999999999999999999999888887754

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.14  E-value=4.2e-06  Score=59.31  Aligned_cols=74  Identities=12%  Similarity=0.023  Sum_probs=59.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+++|.|+ |.+|+.+++.|.++|+.|++++++++..+.+..++     ...++..|.+|.+.++++--       ...|
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~-----~~~vi~Gd~~~~~~l~~~~i-------~~a~   67 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI-----DALVINGDCTKIKTLEDAGI-------EDAD   67 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-----SSEEEESCTTSHHHHHHTTT-------TTCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh-----hhhhccCcccchhhhhhcCh-------hhhh
Confidence            68999998 99999999999999999999999999887754432     45678899999987766511       3678


Q ss_pred             EEEEcCC
Q 024994           81 ILINNAA   87 (259)
Q Consensus        81 ~vi~~ag   87 (259)
                      .++....
T Consensus        68 ~vv~~t~   74 (132)
T d1lssa_          68 MYIAVTG   74 (132)
T ss_dssp             EEEECCS
T ss_pred             hhcccCC
Confidence            8777544

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.11  E-value=6.7e-06  Score=60.94  Aligned_cols=74  Identities=15%  Similarity=0.112  Sum_probs=55.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++||.|+ |.+|+.+|++|+++|++|++++|+.++.+.+.+.    .........+..+.......+        ...|
T Consensus         3 K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~----~~~~~~~~~~~~~~~~~~~~i--------~~~~   69 (182)
T d1e5qa1           3 KSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAG----VQHSTPISLDVNDDAALDAEV--------AKHD   69 (182)
T ss_dssp             CEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTT----CTTEEEEECCTTCHHHHHHHH--------TTSS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhc----ccccccccccccchhhhHhhh--------hccc
Confidence            78999987 9999999999999999999999999988876543    234444556666666655554        3567


Q ss_pred             EEEEcCC
Q 024994           81 ILINNAA   87 (259)
Q Consensus        81 ~vi~~ag   87 (259)
                      .++....
T Consensus        70 ~~i~~~~   76 (182)
T d1e5qa1          70 LVISLIP   76 (182)
T ss_dssp             EEEECSC
T ss_pred             eeEeecc
Confidence            6665543

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=98.11  E-value=1.5e-05  Score=58.74  Aligned_cols=80  Identities=29%  Similarity=0.366  Sum_probs=56.4

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCccE
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNI   81 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~   81 (259)
                      +++|+| +|++|...++.+...|++|+++++++++++.+. ++   +....+ ..|-. .++.....+++.+..+..+|+
T Consensus        29 ~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~-~~---ga~~~~-~~~~~-~~~~~~~~~~~~~~~g~g~D~  101 (170)
T d1e3ja2          29 TVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-NC---GADVTL-VVDPA-KEEESSIIERIRSAIGDLPNV  101 (170)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HT---TCSEEE-ECCTT-TSCHHHHHHHHHHHSSSCCSE
T ss_pred             EEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHH-Hc---CCcEEE-ecccc-ccccchhhhhhhcccccCCce
Confidence            789997 589999999999999999999999999875543 22   333222 22222 223344556666666557999


Q ss_pred             EEEcCCC
Q 024994           82 LINNAAI   88 (259)
Q Consensus        82 vi~~ag~   88 (259)
                      +|.++|.
T Consensus       102 vid~~g~  108 (170)
T d1e3ja2         102 TIDCSGN  108 (170)
T ss_dssp             EEECSCC
T ss_pred             eeecCCC
Confidence            9999984

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.01  E-value=1.3e-05  Score=59.85  Aligned_cols=78  Identities=13%  Similarity=0.121  Sum_probs=53.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      +++||+||+|++|...++.....|++|+.+++++++.+...    +.+....+   |-.+++..+.+.+..   .+..+|
T Consensus        31 ~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~----~~Ga~~vi---~~~~~~~~~~~~~~~---~~~Gvd  100 (182)
T d1v3va2          31 ETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK----QIGFDAAF---NYKTVNSLEEALKKA---SPDGYD  100 (182)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTTCSEEE---ETTSCSCHHHHHHHH---CTTCEE
T ss_pred             CEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHH----hhhhhhhc---ccccccHHHHHHHHh---hcCCCc
Confidence            47999999999999999999999999999999988764432    33433332   333333333332222   124699


Q ss_pred             EEEEcCCC
Q 024994           81 ILINNAAI   88 (259)
Q Consensus        81 ~vi~~ag~   88 (259)
                      +++++.|.
T Consensus       101 ~v~D~vG~  108 (182)
T d1v3va2         101 CYFDNVGG  108 (182)
T ss_dssp             EEEESSCH
T ss_pred             eeEEecCc
Confidence            99999983

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=1.7e-05  Score=58.73  Aligned_cols=76  Identities=14%  Similarity=0.208  Sum_probs=53.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC-CCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ-GKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~~i   79 (259)
                      +++||+||+|++|...++.+...|++|+.+++++++.+.+ ++   .+..-.   .|.++.+-.+    ++.+..+ ..+
T Consensus        30 ~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~-~~---~Ga~~v---i~~~~~~~~~----~i~~~t~~~g~   98 (174)
T d1yb5a2          30 ESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQ---NGAHEV---FNHREVNYID----KIKKYVGEKGI   98 (174)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HH---TTCSEE---EETTSTTHHH----HHHHHHCTTCE
T ss_pred             CEEEEEeccccccccccccccccCcccccccccccccccc-cc---cCcccc---cccccccHHH----HhhhhhccCCc
Confidence            4799999999999999999999999999999988776443 23   233222   3665544333    3333332 359


Q ss_pred             cEEEEcCC
Q 024994           80 NILINNAA   87 (259)
Q Consensus        80 d~vi~~ag   87 (259)
                      |+++.+.|
T Consensus        99 d~v~d~~g  106 (174)
T d1yb5a2          99 DIIIEMLA  106 (174)
T ss_dssp             EEEEESCH
T ss_pred             eEEeeccc
Confidence            99999877

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.95  E-value=5.6e-05  Score=56.38  Aligned_cols=79  Identities=19%  Similarity=0.216  Sum_probs=59.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHH---HHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLH---EWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ   76 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (259)
                      |+|||.|+ ||.|++++..|++.|. +++++.|+.+..++...   ++.... .......|+.+.+++....        
T Consensus        19 k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~--------   88 (182)
T d1vi2a1          19 KTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENT-DCVVTVTDLADQQAFAEAL--------   88 (182)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHS-SCEEEEEETTCHHHHHHHH--------
T ss_pred             CEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhc-CcceEeeecccccchhhhh--------
Confidence            68999999 7999999999999998 79999998776655433   333322 2345578999888765554        


Q ss_pred             CCccEEEEcCCCC
Q 024994           77 GKLNILINNAAIA   89 (259)
Q Consensus        77 ~~id~vi~~ag~~   89 (259)
                      ...|++||+....
T Consensus        89 ~~~diiIN~Tp~G  101 (182)
T d1vi2a1          89 ASADILTNGTKVG  101 (182)
T ss_dssp             HTCSEEEECSSTT
T ss_pred             cccceeccccCCc
Confidence            2689999998754

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.90  E-value=8.7e-06  Score=61.35  Aligned_cols=85  Identities=15%  Similarity=0.143  Sum_probs=57.7

Q ss_pred             EEEE-EcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            2 TALV-TGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         2 ~~lI-tG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      ++|| +||+|++|...++.....|++|+.+.|+.+..++..+.+++.+....+. .|-.+.......++++.+..++++|
T Consensus        31 ~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~vi~-~~~~~~~~~~~~v~~~~~~~g~~vd  109 (189)
T d1gu7a2          31 DWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVIT-EDQNNSREFGPTIKEWIKQSGGEAK  109 (189)
T ss_dssp             CEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEE-HHHHHCGGGHHHHHHHHHHHTCCEE
T ss_pred             EEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccEEEe-ccccchhHHHHHHHHHHhhccCCce
Confidence            3455 6999999999999888899999999988877777666666555433222 1111112333344555544546799


Q ss_pred             EEEEcCC
Q 024994           81 ILINNAA   87 (259)
Q Consensus        81 ~vi~~ag   87 (259)
                      +++.+.|
T Consensus       110 vv~D~vg  116 (189)
T d1gu7a2         110 LALNCVG  116 (189)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999987

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.87  E-value=6.4e-05  Score=54.80  Aligned_cols=70  Identities=14%  Similarity=0.217  Sum_probs=53.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++||.|+ |.+|..++++|.++|+ ++.++.|+.++.+++.+++.     ...  .++   +++...+        ...
T Consensus        25 ~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~-----~~~--~~~---~~~~~~l--------~~~   85 (159)
T d1gpja2          25 KTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG-----GEA--VRF---DELVDHL--------ARS   85 (159)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT-----CEE--CCG---GGHHHHH--------HTC
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhh-----ccc--ccc---hhHHHHh--------ccC
Confidence            68999998 9999999999999998 69999999999888877652     121  122   2333333        368


Q ss_pred             cEEEEcCCCC
Q 024994           80 NILINNAAIA   89 (259)
Q Consensus        80 d~vi~~ag~~   89 (259)
                      |+||++.+..
T Consensus        86 Divi~atss~   95 (159)
T d1gpja2          86 DVVVSATAAP   95 (159)
T ss_dssp             SEEEECCSSS
T ss_pred             CEEEEecCCC
Confidence            9999999853

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.82  E-value=3.4e-05  Score=57.24  Aligned_cols=77  Identities=14%  Similarity=0.154  Sum_probs=55.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC-CCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ-GKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~~i   79 (259)
                      +++||+||+|++|..+++.....|++|+.+++++++.+... ++   +..-   ..|..+++-.+    ++.+..+ ..+
T Consensus        30 ~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~-~l---Ga~~---vi~~~~~d~~~----~v~~~t~g~g~   98 (179)
T d1qora2          30 EQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KA---GAWQ---VINYREEDLVE----RLKEITGGKKV   98 (179)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH---TCSE---EEETTTSCHHH----HHHHHTTTCCE
T ss_pred             CEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHH-hc---CCeE---EEECCCCCHHH----HHHHHhCCCCe
Confidence            47999999999999999999999999999999999876543 33   3222   23555543333    3333332 469


Q ss_pred             cEEEEcCCC
Q 024994           80 NILINNAAI   88 (259)
Q Consensus        80 d~vi~~ag~   88 (259)
                      |+++.+.|.
T Consensus        99 d~v~d~~g~  107 (179)
T d1qora2          99 RVVYDSVGR  107 (179)
T ss_dssp             EEEEECSCG
T ss_pred             EEEEeCccH
Confidence            999999984

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.82  E-value=9.4e-05  Score=54.55  Aligned_cols=73  Identities=12%  Similarity=0.198  Sum_probs=55.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+++|.|+ ||.+++++..|.+.+.+|+++.|+.++.+.+.+.+.... ++.....|-..              . ...|
T Consensus        19 k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~-~~~~~~~~~~~--------------~-~~~d   81 (171)
T d1p77a1          19 QHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG-NIQAVSMDSIP--------------L-QTYD   81 (171)
T ss_dssp             CEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS-CEEEEEGGGCC--------------C-SCCS
T ss_pred             CEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhcc-ccchhhhcccc--------------c-cccc
Confidence            68899887 888999999999988899999999999999888876533 44444433211              1 4799


Q ss_pred             EEEEcCCCCC
Q 024994           81 ILINNAAIAF   90 (259)
Q Consensus        81 ~vi~~ag~~~   90 (259)
                      ++||+.....
T Consensus        82 iiIN~tp~g~   91 (171)
T d1p77a1          82 LVINATSAGL   91 (171)
T ss_dssp             EEEECCCC--
T ss_pred             eeeecccccc
Confidence            9999988653

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.77  E-value=4.9e-05  Score=56.08  Aligned_cols=72  Identities=13%  Similarity=0.240  Sum_probs=54.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+|||.|+ ||.+++++..|.+.|.+|+++.|+.++.+++.+.+.+.. .+..+  +..+.             .....|
T Consensus        19 k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~-~~~~~--~~~~~-------------~~~~~d   81 (170)
T d1nyta1          19 LRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG-SIQAL--SMDEL-------------EGHEFD   81 (170)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS-SEEEC--CSGGG-------------TTCCCS
T ss_pred             CEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcc-ccccc--ccccc-------------cccccc
Confidence            68999998 899999999999999999999999999988887765543 23322  22211             014689


Q ss_pred             EEEEcCCCC
Q 024994           81 ILINNAAIA   89 (259)
Q Consensus        81 ~vi~~ag~~   89 (259)
                      ++||+....
T Consensus        82 liIN~Tp~G   90 (170)
T d1nyta1          82 LIINATSSG   90 (170)
T ss_dssp             EEEECCSCG
T ss_pred             eeecccccC
Confidence            999998654

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.74  E-value=0.00031  Score=50.20  Aligned_cols=111  Identities=10%  Similarity=0.094  Sum_probs=67.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCC--CEEEEeeCChhHHHHHHHHHHhc---CCcEEEEEecCCCHHHHHHHHHHHHHHc
Q 024994            1 MTALVTGGTRGIGHATVEELARFG--AIVHTCSRNQIELDARLHEWKNK---GFKVTGSVCDLSSREQREKLIETVTSIF   75 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (259)
                      |++.|.|+ |.+|..+|..|+.+|  ..|+++|+++++.+....+++..   .........|..   +           .
T Consensus         6 ~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~~---~-----------~   70 (146)
T d1ez4a1           6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYS---D-----------C   70 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGG---G-----------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccHH---H-----------h
Confidence            57889996 999999999999998  48999999998877666666531   222333344431   1           1


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecC
Q 024994           76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISS  137 (259)
Q Consensus        76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS  137 (259)
                       ..-|++|.++|.....      .++-.+.+..|..-.-.+    .+.+.+.. .+.++++|-
T Consensus        71 -~~adivvitag~~~~~------g~~r~~l~~~N~~i~~~~----~~~i~~~~p~aivivvtN  122 (146)
T d1ez4a1          71 -KDADLVVITAGAPQKP------GESRLDLVNKNLNILSSI----VKPVVDSGFDGIFLVAAN  122 (146)
T ss_dssp             -TTCSEEEECCCC----------------CHHHHHHHHHHH----HHHHHHTTCCSEEEECSS
T ss_pred             -ccccEEEEecccccCC------CCCHHHHHHHHHHHHHHH----HHHHhhcCCCcEEEEeCC
Confidence             4689999999964321      122233445565444444    44445443 455666554

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.73  E-value=3.9e-05  Score=48.62  Aligned_cols=40  Identities=25%  Similarity=0.326  Sum_probs=35.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDAR   40 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~   40 (259)
                      +++||+||+||+|...++.+...|++|+.+.+++++.+-+
T Consensus        33 ~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~   72 (77)
T d1o8ca2          33 GEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (77)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             CcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence            4799999999999999998888999999999999887543

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.72  E-value=2.7e-05  Score=58.06  Aligned_cols=76  Identities=18%  Similarity=0.271  Sum_probs=53.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC-CCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ-GKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~~i   79 (259)
                      +++||+||+|++|..+++.+...|++|+++.+++++.+.+    .+.+....   .|-.+.+    +.+++.+..+ .++
T Consensus        27 ~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l----~~~Ga~~v---i~~~~~~----~~~~v~~~t~~~g~   95 (183)
T d1pqwa_          27 ERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML----SRLGVEYV---GDSRSVD----FADEILELTDGYGV   95 (183)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH----HTTCCSEE---EETTCST----HHHHHHHHTTTCCE
T ss_pred             CEEEEECCCCCcccccchhhccccccceeeeccccccccc----cccccccc---ccCCccC----HHHHHHHHhCCCCE
Confidence            4799999999999999999999999999999988776432    23343322   3444432    3334444432 369


Q ss_pred             cEEEEcCC
Q 024994           80 NILINNAA   87 (259)
Q Consensus        80 d~vi~~ag   87 (259)
                      |++|.+.|
T Consensus        96 d~v~d~~g  103 (183)
T d1pqwa_          96 DVVLNSLA  103 (183)
T ss_dssp             EEEEECCC
T ss_pred             EEEEeccc
Confidence            99999998

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.70  E-value=0.00034  Score=49.91  Aligned_cols=114  Identities=14%  Similarity=0.101  Sum_probs=66.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC--EEEEeeCChh--HHHHHHHHHHh---c-CCcEEEEEecCCCHHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQI--ELDARLHEWKN---K-GFKVTGSVCDLSSREQREKLIETVT   72 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~--~V~~~~r~~~--~~~~~~~~~~~---~-~~~~~~~~~D~~~~~~~~~~~~~~~   72 (259)
                      +++.|+|++|.+|.++|..|+.+|.  ++++++++++  +.+....++..   . ..+......--.|.+.         
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~~---------   71 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRI---------   71 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGG---------
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchHHH---------
Confidence            5799999999999999999999994  8999998763  34444444442   1 2222222111112211         


Q ss_pred             HHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEec
Q 024994           73 SIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFIS  136 (259)
Q Consensus        73 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~is  136 (259)
                        + ..-|++|.+||....   ...+.   .+.++.|..-.-.+.+    .+.+..+..++.+|
T Consensus        72 --l-~~aDvVVitAG~~~~---~g~sR---~dl~~~Na~iv~~i~~----~i~~~~~~~iivVt  122 (145)
T d1hyea1          72 --I-DESDVVIITSGVPRK---EGMSR---MDLAKTNAKIVGKYAK----KIAEICDTKIFVIT  122 (145)
T ss_dssp             --G-TTCSEEEECCSCCCC---TTCCH---HHHHHHHHHHHHHHHH----HHHHHCCCEEEECS
T ss_pred             --h-ccceEEEEecccccC---CCCCh---hhhhhhhHHHHHHHHH----HHhccCCCeEEEEc
Confidence              1 468999999997422   12232   2345566554444444    44444345565553

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.61  E-value=5.7e-05  Score=55.64  Aligned_cols=78  Identities=21%  Similarity=0.194  Sum_probs=54.9

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      +++|.|+ |++|...++.+...|+ +|+++++++++++.. +++   +... ++..+-.+...   ..+.+....+..+|
T Consensus        29 ~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a-~~~---Ga~~-~~~~~~~~~~~---~~~~~~~~~g~g~D   99 (171)
T d1pl8a2          29 KVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA-KEI---GADL-VLQISKESPQE---IARKVEGQLGCKPE   99 (171)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHT---TCSE-EEECSSCCHHH---HHHHHHHHHTSCCS
T ss_pred             EEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHH-HHh---CCcc-ccccccccccc---ccccccccCCCCce
Confidence            6899987 9999999999999998 799999999988654 333   3222 22333334444   34444444545799


Q ss_pred             EEEEcCCC
Q 024994           81 ILINNAAI   88 (259)
Q Consensus        81 ~vi~~ag~   88 (259)
                      ++|.++|.
T Consensus       100 vvid~~G~  107 (171)
T d1pl8a2         100 VTIECTGA  107 (171)
T ss_dssp             EEEECSCC
T ss_pred             EEEeccCC
Confidence            99999994

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.61  E-value=9.1e-05  Score=54.58  Aligned_cols=72  Identities=18%  Similarity=0.237  Sum_probs=50.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      +++||+||+|++|...++.+...|++|+.+++++++.+... +   .+....   .|..+.      .++...  +..+|
T Consensus        29 ~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~-~---lGa~~~---i~~~~~------~~~~~~--~~g~D   93 (171)
T d1iz0a2          29 EKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-A---LGAEEA---ATYAEV------PERAKA--WGGLD   93 (171)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-H---TTCSEE---EEGGGH------HHHHHH--TTSEE
T ss_pred             CEEEEEeccccchhhhhhhhccccccccccccccccccccc-c---ccccee---eehhhh------hhhhhc--ccccc
Confidence            47999999999999999999999999999999888765433 2   233322   233321      122222  24699


Q ss_pred             EEEEcCC
Q 024994           81 ILINNAA   87 (259)
Q Consensus        81 ~vi~~ag   87 (259)
                      ++|.+.|
T Consensus        94 ~v~d~~G  100 (171)
T d1iz0a2          94 LVLEVRG  100 (171)
T ss_dssp             EEEECSC
T ss_pred             ccccccc
Confidence            9999876

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.61  E-value=0.00015  Score=53.88  Aligned_cols=79  Identities=15%  Similarity=0.156  Sum_probs=53.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC-CC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ-GK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~~   78 (259)
                      .++||+|+ |++|...++.+...|+ +|+++++++++++.+ +++   +... +  .|..+. +.....+++.+... ..
T Consensus        30 ~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a-~~l---Ga~~-v--i~~~~~-~~~~~~~~i~~~~~~~g  100 (182)
T d1vj0a2          30 KTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA-EEI---GADL-T--LNRRET-SVEERRKAIMDITHGRG  100 (182)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH-HHT---TCSE-E--EETTTS-CHHHHHHHHHHHTTTSC
T ss_pred             CEEEEECC-Cccchhheeccccccccccccccccccccccc-ccc---cceE-E--Eecccc-chHHHHHHHHHhhCCCC
Confidence            37899987 8999999999999998 899999999988644 333   3222 2  233321 12223333444332 35


Q ss_pred             ccEEEEcCCC
Q 024994           79 LNILINNAAI   88 (259)
Q Consensus        79 id~vi~~ag~   88 (259)
                      +|++|.+.|.
T Consensus       101 ~Dvvid~vG~  110 (182)
T d1vj0a2         101 ADFILEATGD  110 (182)
T ss_dssp             EEEEEECSSC
T ss_pred             ceEEeecCCc
Confidence            9999999985

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.60  E-value=0.0005  Score=48.94  Aligned_cols=114  Identities=15%  Similarity=0.085  Sum_probs=68.1

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCC--EEEEeeCChhHHHHHHHHHHhcCCcE-EEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            2 TALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKGFKV-TGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      ++.|+||+|.+|.++|..|+.+|.  ++++++.++.+.+.  .++....... ......-.   +..+.+        ..
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a--~Dl~~~~~~~~~~~~~~~~---~~~~~~--------~~   68 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVA--ADLSHIETRATVKGYLGPE---QLPDCL--------KG   68 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHH--HHHTTSSSSCEEEEEESGG---GHHHHH--------TT
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhh--HHHhhhhhhcCCCeEEcCC---ChHHHh--------CC
Confidence            688999999999999999999986  69999988755433  3443221111 11111212   211222        46


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC-CCCEEEEecCC
Q 024994           79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSV  138 (259)
Q Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~isS~  138 (259)
                      -|++|..||......   .+.   .+.++.|..-.-.+.+.+    .+. .++.++++|..
T Consensus        69 aDivVitag~~~~~g---~sR---~~ll~~N~~i~~~i~~~i----~~~~p~~iiivvtNP  119 (144)
T d1mlda1          69 CDVVVIPAGVPRKPG---MTR---DDLFNTNATIVATLTAAC----AQHCPDAMICIISNP  119 (144)
T ss_dssp             CSEEEECCSCCCCTT---CCG---GGGHHHHHHHHHHHHHHH----HHHCTTSEEEECSSC
T ss_pred             CCEEEECCCcCCCCC---CCc---chHHHHHHHHHHHHHHHH----HhcCCCeEEEEecCc
Confidence            899999999743221   121   223556666555555555    443 35677777764

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.58  E-value=4.7e-05  Score=56.51  Aligned_cols=104  Identities=20%  Similarity=0.181  Sum_probs=66.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      .++||+||+||+|...++.....|++|+.+.+++++.+... +   .+....+   |-.+.  ..+.++   ...++++|
T Consensus        33 ~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~-~---lGa~~vi---~~~~~--~~~~~~---~~~~~gvD  100 (176)
T d1xa0a2          33 GPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-V---LGAKEVL---AREDV--MAERIR---PLDKQRWA  100 (176)
T ss_dssp             CCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-H---TTCSEEE---ECC--------------CCSCCEE
T ss_pred             CEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHH-h---cccceee---ecchh--HHHHHH---HhhccCcC
Confidence            36999999999999999999899999999999998875543 2   2333322   22221  111111   12235799


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCC
Q 024994           81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI  144 (259)
Q Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~  144 (259)
                      ++|.+.|..        ..   .               ..+..++.  +|+++.++...+..+.
T Consensus       101 ~vid~vgg~--------~~---~---------------~~l~~l~~--~Griv~~G~~~g~~~~  136 (176)
T d1xa0a2         101 AAVDPVGGR--------TL---A---------------TVLSRMRY--GGAVAVSGLTGGAEVP  136 (176)
T ss_dssp             EEEECSTTT--------TH---H---------------HHHHTEEE--EEEEEECSCCSSSCCC
T ss_pred             EEEEcCCch--------hH---H---------------HHHHHhCC--CceEEEeecccCcccC
Confidence            999999852        11   1               12333333  6999999997765543

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.56  E-value=3.7e-05  Score=54.24  Aligned_cols=73  Identities=18%  Similarity=0.192  Sum_probs=56.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |+++|.|. |-+|.++++.|.++|+.|++++.+++..+.+.    +.+  ...+.+|.++.+.++++-      . .+.|
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~----~~~--~~~~~gd~~~~~~l~~a~------i-~~a~   66 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA----SYA--THAVIANATEENELLSLG------I-RNFE   66 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTT----TTC--SEEEECCTTCTTHHHHHT------G-GGCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHH----HhC--CcceeeecccchhhhccC------C-cccc
Confidence            67888877 89999999999999999999999998887653    222  345568999987766541      1 3578


Q ss_pred             EEEEcCC
Q 024994           81 ILINNAA   87 (259)
Q Consensus        81 ~vi~~ag   87 (259)
                      .+|...+
T Consensus        67 ~vi~~~~   73 (134)
T d2hmva1          67 YVIVAIG   73 (134)
T ss_dssp             EEEECCC
T ss_pred             EEEEEcC
Confidence            8777666

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.44  E-value=0.0033  Score=44.52  Aligned_cols=116  Identities=15%  Similarity=0.082  Sum_probs=67.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHC-C--CEEEEeeCChhHHHHHHHHHHhcCCcE-EEEEecCCCHHHHHHHHHHHHHHcC
Q 024994            1 MTALVTGGTRGIGHATVEELARF-G--AIVHTCSRNQIELDARLHEWKNKGFKV-TGSVCDLSSREQREKLIETVTSIFQ   76 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~-G--~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~~   76 (259)
                      +++.|+|++|.+|.++|..|+.+ +  ..+++.+..+ ..+....++....... ......-.+.+.    +        
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~~~~~~~~~~----~--------   67 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDATPA----L--------   67 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEEECSSCCHHH----H--------
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcEEEcCCCccc----c--------
Confidence            57899999999999999988643 4  5899999865 4444445555432211 111222323322    1        


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC-CCCEEEEecCCC
Q 024994           77 GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVG  139 (259)
Q Consensus        77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~isS~~  139 (259)
                      ..-|++|.++|......   .+.   .+.++.|..-.-.+.+.+    .+. .++.++++|...
T Consensus        68 ~~aDvvvitaG~~~k~g---~~R---~dl~~~N~~i~~~v~~~i----~~~~p~aivivvtNPv  121 (145)
T d2cmda1          68 EGADVVLISAGVRRKPG---MDR---SDLFNVNAGIVKNLVQQV----AKTCPKACIGIITNPV  121 (145)
T ss_dssp             TTCSEEEECCSCCCCTT---CCG---GGGHHHHHHHHHHHHHHH----HHHCTTSEEEECSSSH
T ss_pred             CCCCEEEECCCccCCCC---cch---hhHHHHHHHHHHHHHHHH----HhhCCCcEEEEccCCc
Confidence            46899999999753221   121   223456654444444444    443 356777777643

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.44  E-value=0.00021  Score=52.37  Aligned_cols=78  Identities=14%  Similarity=0.136  Sum_probs=53.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      .+++|+|++|++|..+++.+...|. +|+++++++++.+... ++   +... +  .|.++.+..++..+..   .++.+
T Consensus        29 ~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~-~~---Ga~~-~--i~~~~~~~~~~~~~~~---~~~~~   98 (170)
T d1jvba2          29 KTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RA---GADY-V--INASMQDPLAEIRRIT---ESKGV   98 (170)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HH---TCSE-E--EETTTSCHHHHHHHHT---TTSCE
T ss_pred             CEEEEEeccccceeeeeecccccccccccccccchhhHHHHH-Hc---CCce-e--eccCCcCHHHHHHHHh---hcccc
Confidence            3799999999999999999998995 8999999988775543 23   3322 2  2344433333332221   22469


Q ss_pred             cEEEEcCCC
Q 024994           80 NILINNAAI   88 (259)
Q Consensus        80 d~vi~~ag~   88 (259)
                      |++|.++|.
T Consensus        99 d~vid~~g~  107 (170)
T d1jvba2          99 DAVIDLNNS  107 (170)
T ss_dssp             EEEEESCCC
T ss_pred             hhhhccccc
Confidence            999999984

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.43  E-value=0.0015  Score=46.64  Aligned_cols=113  Identities=12%  Similarity=0.031  Sum_probs=69.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC--EEEEeeCChhHHHHHHHHHHhc----CCcEEEEEecCCCHHHHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNK----GFKVTGSVCDLSSREQREKLIETVTSI   74 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~   74 (259)
                      +++.|+|+ |.+|.++|..|+.+|.  .++++|++++..+....++...    .....+...|..   .           
T Consensus         7 ~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~~---~-----------   71 (148)
T d1ldna1           7 ARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYD---D-----------   71 (148)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGG---G-----------
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCHH---H-----------
Confidence            46888997 9999999999999986  7999999998877666666532    223333333321   1           


Q ss_pred             cCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHh-CCCCEEEEecCCC
Q 024994           75 FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKA-SGNGSIVFISSVG  139 (259)
Q Consensus        75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~ii~isS~~  139 (259)
                      + ..-|++|.++|.........  .    +.+..|..-.-.+.    +.+.+ ...+.+++++-..
T Consensus        72 l-~daDvvvitag~~~~~~~~R--~----dl~~~N~~i~~~i~----~~i~~~~p~a~~ivvtNPv  126 (148)
T d1ldna1          72 C-RDADLVVICAGANQKPGETR--L----DLVDKNIAIFRSIV----ESVMASGFQGLFLVATNPV  126 (148)
T ss_dssp             T-TTCSEEEECCSCCCCTTTCS--G----GGHHHHHHHHHHHH----HHHHHHTCCSEEEECSSSH
T ss_pred             h-ccceeEEEecccccccCcch--h----HHHHHHHHHHHHHH----HHHHhhCCCceEEEecCcc
Confidence            1 46899999999753221111  1    22234443333343    33343 3456777776643

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.39  E-value=0.00016  Score=54.03  Aligned_cols=77  Identities=16%  Similarity=0.194  Sum_probs=51.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCE-EEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAI-VHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      ++|||+||+||+|...++.....|+. |+.+++++++...+.+++   +...   ..|..+++ ..+.++++   .+..+
T Consensus        32 etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~---gad~---vi~~~~~~-~~~~~~~~---~~~Gv  101 (187)
T d1vj1a2          32 QTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSEL---GFDA---AVNYKTGN-VAEQLREA---CPGGV  101 (187)
T ss_dssp             CEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHS---CCSE---EEETTSSC-HHHHHHHH---CTTCE
T ss_pred             CEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcc---cceE---Eeeccchh-HHHHHHHH---hccCc
Confidence            47999999999999999988889985 555677776666655443   3222   23444332 22223322   33469


Q ss_pred             cEEEEcCC
Q 024994           80 NILINNAA   87 (259)
Q Consensus        80 d~vi~~ag   87 (259)
                      |+++.+.|
T Consensus       102 Dvv~D~vG  109 (187)
T d1vj1a2         102 DVYFDNVG  109 (187)
T ss_dssp             EEEEESSC
T ss_pred             eEEEecCC
Confidence            99999998

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.37  E-value=0.0013  Score=46.79  Aligned_cols=116  Identities=16%  Similarity=0.141  Sum_probs=69.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC--EEEEeeCChhHHHHHHHHHHhc----CCcEEEEEecCCCHHHHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNK----GFKVTGSVCDLSSREQREKLIETVTSI   74 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~   74 (259)
                      |++.|+|+ |.+|..+|..|+.+|.  .++++++++++.+....++.+.    .........|.   +.           
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~---~~-----------   66 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW---AA-----------   66 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG---GG-----------
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCH---HH-----------
Confidence            78889995 9999999999999984  7999999999877666666532    22223222332   11           


Q ss_pred             cCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecCC
Q 024994           75 FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSV  138 (259)
Q Consensus        75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS~  138 (259)
                      . ..-|++|.+||.....  .+...++-.+.++.|.    .+++.+.+.+.+.. ++-++++|-.
T Consensus        67 l-~~adiVVitaG~~~~~--~~~~g~~R~~l~~~N~----~i~~~i~~~i~~~~p~aivivvtNP  124 (146)
T d1hyha1          67 L-ADADVVISTLGNIKLQ--QDNPTGDRFAELKFTS----SMVQSVGTNLKESGFHGVLVVISNP  124 (146)
T ss_dssp             G-TTCSEEEECCSCGGGT--C-------CTTHHHHH----HHHHHHHHHHHHTTCCSEEEECSSS
T ss_pred             h-ccccEEEEeccccccc--cccCCccHHHHHHHHH----HHHHHHHHHHhhcCCCeEEEEecCc
Confidence            1 4689999999964211  1111111122344554    34444555555543 4666666653

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.34  E-value=0.0031  Score=45.44  Aligned_cols=113  Identities=12%  Similarity=0.050  Sum_probs=71.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC--EEEEeeCChhHHHHHHHHHHhc----CCcEEEEEecCCCHHHHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNK----GFKVTGSVCDLSSREQREKLIETVTSI   74 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~   74 (259)
                      +++.|.|+ |.+|.++|..|+.+|.  .++++|++++..+....++...    +........|..+              
T Consensus        21 ~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~~--------------   85 (160)
T d1i0za1          21 NKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYSV--------------   85 (160)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGGG--------------
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchhh--------------
Confidence            36788896 9999999999999996  7999999998887666666542    2222222233322              


Q ss_pred             cCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC-CCCEEEEecCCC
Q 024994           75 FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVG  139 (259)
Q Consensus        75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~isS~~  139 (259)
                      . ..-|+||..||.....   ..+.   .+.++.|..    +.+.+.+.+.+. .++-++++|-..
T Consensus        86 ~-~~adiVVitAg~~~~~---g~tR---~~l~~~N~~----i~~~i~~~i~~~~p~aiiivvtNPv  140 (160)
T d1i0za1          86 T-ANSKIVVVTAGVRQQE---GESR---LNLVQRNVN----VFKFIIPQIVKYSPDCIIIVVSNPV  140 (160)
T ss_dssp             G-TTCSEEEECCSCCCCT---TCCG---GGGHHHHHH----HHHHHHHHHHHHCTTCEEEECSSSH
T ss_pred             c-ccccEEEEecCCcccc---Ccch---HHHHHHHHH----HHHHHHHHHHhcCCCcEEEEeCCch
Confidence            1 4689999999975321   1221   123334443    455555555553 356777777643

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.34  E-value=0.0015  Score=46.91  Aligned_cols=114  Identities=11%  Similarity=0.078  Sum_probs=67.1

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCC---------EEEEeeCChhHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHH
Q 024994            2 TALVTGGTRGIGHATVEELARFGA---------IVHTCSRNQIELDARLHEWKNKG-FKVTGSVCDLSSREQREKLIETV   71 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~---------~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~   71 (259)
                      +|.|+||+|.+|.+++..|+..+.         +++..+++.+.++....++.... .....+...-.+.+.        
T Consensus         6 KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------   77 (154)
T d1y7ta1           6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVA--------   77 (154)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHH--------
T ss_pred             EEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchhhh--------
Confidence            689999999999999999998753         23334556666666666655442 234443443322222        


Q ss_pred             HHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHh-CC-CCEEEEecC
Q 024994           72 TSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKA-SG-NGSIVFISS  137 (259)
Q Consensus        72 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~-~~~ii~isS  137 (259)
                         + ...|++|.++|....   ...+.++   .+..|+.-.    +.+.+.+.+ .. ...++.+|.
T Consensus        78 ---~-~~advViitaG~~~~---pg~~r~d---l~~~N~~i~----~~~~~~i~k~a~~~~~vivvsN  131 (154)
T d1y7ta1          78 ---F-KDADYALLVGAAPRK---AGMERRD---LLQVNGKIF----TEQGRALAEVAKKDVKVLVVGN  131 (154)
T ss_dssp             ---T-TTCSEEEECCCCCCC---TTCCHHH---HHHHHHHHH----HHHHHHHHHHSCTTCEEEECSS
T ss_pred             ---c-ccccEEEeecCcCCC---CCCcHHH---HHHHHHHHH----HHHHHHHHHhCCCCcEEEEecC
Confidence               1 579999999997532   2234333   344554443    444444455 23 355666654

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.30  E-value=0.0019  Score=45.52  Aligned_cols=111  Identities=10%  Similarity=0.041  Sum_probs=69.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC--EEEEeeCChhHHHHHHHHHHhc---CCcEEEEEecCCCHHHHHHHHHHHHHHc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNK---GFKVTGSVCDLSSREQREKLIETVTSIF   75 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (259)
                      +++.|.|+ |.+|.+++..++.++.  +++++|+++++++....++...   .........|.   +.           +
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~---~~-----------~   65 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDY---AD-----------L   65 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCG---GG-----------G
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcH---HH-----------h
Confidence            56788897 8999999999999884  7999999998877665555432   22333322222   11           1


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC-CCCEEEEecC
Q 024994           76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISS  137 (259)
Q Consensus        76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~isS  137 (259)
                       ..-|++|.+||.....   ..+.   .+.+..|..    +.+...+.+.+. .++.++++|-
T Consensus        66 -~~adivvitag~~~~~---g~~r---~dl~~~N~~----I~~~i~~~i~~~~p~aivivvtN  117 (140)
T d1a5za1          66 -KGSDVVIVAAGVPQKP---GETR---LQLLGRNAR----VMKEIARNVSKYAPDSIVIVVTN  117 (140)
T ss_dssp             -TTCSEEEECCCCCCCS---SCCH---HHHHHHHHH----HHHHHHHHHHHHCTTCEEEECSS
T ss_pred             -cCCCEEEEecccccCC---Ccch---hhhhccccc----hHHHHHHHHHhcCCCcEEEEeCC
Confidence             4689999999975321   1222   223445543    444445555553 4566666664

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.29  E-value=0.00078  Score=49.17  Aligned_cols=43  Identities=19%  Similarity=0.213  Sum_probs=37.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEW   44 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~   44 (259)
                      |+|||.|+ ||.+++++..|.+.|. +|.++.|+.++.+.+.+.+
T Consensus        18 ~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~   61 (167)
T d1npya1          18 AKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY   61 (167)
T ss_dssp             SCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhh
Confidence            57899988 9999999999999997 7999999999888776654

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.28  E-value=0.0032  Score=45.36  Aligned_cols=111  Identities=13%  Similarity=0.077  Sum_probs=69.5

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCC--EEEEeeCChhHHHHHHHHHHhc----CCcEEEEEecCCCHHHHHHHHHHHHHHc
Q 024994            2 TALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNK----GFKVTGSVCDLSSREQREKLIETVTSIF   75 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (259)
                      ++.|+|+ |.+|..+|..|+.+|.  .++++|++++..+....++...    +........|..+              .
T Consensus        21 KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~~~--------------~   85 (159)
T d2ldxa1          21 KITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDYNV--------------S   85 (159)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSGGG--------------G
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccchhh--------------h
Confidence            5788896 9999999999999986  7999999998887777777642    2222222233321              1


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHh-CCCCEEEEecCC
Q 024994           76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKA-SGNGSIVFISSV  138 (259)
Q Consensus        76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~ii~isS~  138 (259)
                       ..-|++|..||..........+.      ++.|.    .+.+...+.+.+ ..++.+++++..
T Consensus        86 -~~adivvitag~~~~~~~~R~dl------l~~N~----~i~~~i~~~i~~~~p~~ivivvtNP  138 (159)
T d2ldxa1          86 -ANSKLVIITAGARMVSGQTRLDL------LQRNV----AIMKAIVPGVIQNSPDCKIIVVTNP  138 (159)
T ss_dssp             -TTEEEEEECCSCCCCTTTCSSCT------THHHH----HHHHHHTTTHHHHSTTCEEEECSSS
T ss_pred             -ccccEEEEecccccCCCCCHHHH------HHHHH----HHHHHHHHHHhccCCCeEEEEeCCc
Confidence             47899999999754322222111      22333    334444444444 345777777763

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=97.27  E-value=0.0034  Score=44.32  Aligned_cols=111  Identities=10%  Similarity=-0.006  Sum_probs=67.6

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCC--EEEEeeCCh--hHHHHHHHHHHh---cCCcEEEEEecCCCHHHHHHHHHHHHHH
Q 024994            2 TALVTGGTRGIGHATVEELARFGA--IVHTCSRNQ--IELDARLHEWKN---KGFKVTGSVCDLSSREQREKLIETVTSI   74 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~--~V~~~~r~~--~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~   74 (259)
                      ++.|+|++|.+|.++|..+..++.  .+++++.+.  +..+....++..   ...+......|..   +           
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~~---~-----------   67 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYE---D-----------   67 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGG---G-----------
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCHH---H-----------
Confidence            688999999999999999999986  699998643  344433444442   2223333333332   1           


Q ss_pred             cCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecC
Q 024994           75 FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISS  137 (259)
Q Consensus        75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS  137 (259)
                      . ..-|++|..||.....   ..+   -.+.++.|..    +.+.+.+.+.+.. ++.++.++-
T Consensus        68 ~-~~aDiVvitaG~~~~~---g~~---R~dl~~~N~~----I~~~i~~~i~~~~p~~i~ivvtN  120 (142)
T d1o6za1          68 T-AGSDVVVITAGIPRQP---GQT---RIDLAGDNAP----IMEDIQSSLDEHNDDYISLTTSN  120 (142)
T ss_dssp             G-TTCSEEEECCCCCCCT---TCC---HHHHHHHHHH----HHHHHHHHHHTTCSCCEEEECCS
T ss_pred             h-hhcCEEEEeccccccc---CCc---hhhHHHHHHH----HHHHHHHHHHhcCCCceEEEecC
Confidence            1 4689999999964321   122   2334555554    4444555556553 466666655

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.25  E-value=0.00037  Score=51.28  Aligned_cols=78  Identities=15%  Similarity=0.137  Sum_probs=51.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      .++||.|+ +|+|...+..+...|+ +|+++++++++.+... ++   +..-.+...|-.  +.+.+..+..   .++.+
T Consensus        30 dtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~-~~---Ga~~~i~~~~~~--~~~~~~~~~~---~~~G~   99 (176)
T d2jhfa2          30 STCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-EV---GATECVNPQDYK--KPIQEVLTEM---SNGGV   99 (176)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT---TCSEEECGGGCS--SCHHHHHHHH---TTSCB
T ss_pred             CEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHH-Hh---CCeeEEecCCch--hHHHHHHHHH---hcCCC
Confidence            37999999 7899999999999985 8999999999986543 22   322221112221  2233333332   23579


Q ss_pred             cEEEEcCCC
Q 024994           80 NILINNAAI   88 (259)
Q Consensus        80 d~vi~~ag~   88 (259)
                      |++|.+.|.
T Consensus       100 D~vid~~G~  108 (176)
T d2jhfa2         100 DFSFEVIGR  108 (176)
T ss_dssp             SEEEECSCC
T ss_pred             CEEEecCCc
Confidence            999999995

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.20  E-value=0.00029  Score=52.07  Aligned_cols=39  Identities=26%  Similarity=0.364  Sum_probs=35.7

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHH
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDAR   40 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~   40 (259)
                      ++||+||+||+|...++.....|++|+.+++++++.+.+
T Consensus        34 ~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~   72 (177)
T d1o89a2          34 EIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (177)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             cEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHH
Confidence            799999999999999999999999999999999987544

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=97.20  E-value=0.0038  Score=44.04  Aligned_cols=112  Identities=16%  Similarity=0.085  Sum_probs=68.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC--EEEEeeCChhHHHHHHHHHHhc----CCcEEEEEecCCCHHHHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNK----GFKVTGSVCDLSSREQREKLIETVTSI   74 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~   74 (259)
                      +++.|+|+ |.+|.+++..|+.+|.  +++++|+++++.+....++...    .....+...  .+.+.           
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~~-----------   66 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYAD-----------   66 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGGG-----------
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCHHH-----------
Confidence            57888896 9999999999999984  8999999998776555454322    223333222  22211           


Q ss_pred             cCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHh-CCCCEEEEecC
Q 024994           75 FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKA-SGNGSIVFISS  137 (259)
Q Consensus        75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~ii~isS  137 (259)
                      + ..-|++|.++|.....   ..+.   .+.++.|..-...+.+.+    .+ ..++.++++|-
T Consensus        67 ~-~dadvvvitag~~~~~---g~~r---~~l~~~N~~i~~~i~~~i----~~~~p~aivivvtN  119 (142)
T d1guza1          67 T-ANSDIVIITAGLPRKP---GMTR---EDLLMKNAGIVKEVTDNI----MKHSKNPIIIVVSN  119 (142)
T ss_dssp             G-TTCSEEEECCSCCCCT---TCCH---HHHHHHHHHHHHHHHHHH----HHHCSSCEEEECCS
T ss_pred             h-cCCeEEEEEEecCCCC---CCch---HHHHHHHHHHHHHHHHHh----hccCCCeEEEEecC
Confidence            1 4689999999975321   1222   233445555444444444    43 33566666655

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.20  E-value=0.0013  Score=47.62  Aligned_cols=82  Identities=18%  Similarity=0.118  Sum_probs=55.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHH--------h--cCCcEEEEEecCCCHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK--------N--KGFKVTGSVCDLSSREQREKLIET   70 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--------~--~~~~~~~~~~D~~~~~~~~~~~~~   70 (259)
                      |++.|.|. |-+|..+|+.|.++|++|++.+|+++..+...+.-.        +  ....+.++.+   -.+.+++++++
T Consensus         1 MkI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilav---p~~~~~~vl~~   76 (165)
T d2f1ka2           1 MKIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCT---PIQLILPTLEK   76 (165)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECS---CHHHHHHHHHH
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecccccccccccccC---cHhhhhhhhhh
Confidence            57888877 999999999999999999999999888766543210        0  0122333322   35678888888


Q ss_pred             HHHHcCCCccEEEEcCC
Q 024994           71 VTSIFQGKLNILINNAA   87 (259)
Q Consensus        71 ~~~~~~~~id~vi~~ag   87 (259)
                      +.... .+=.++++.++
T Consensus        77 l~~~l-~~~~iv~~~~s   92 (165)
T d2f1ka2          77 LIPHL-SPTAIVTDVAS   92 (165)
T ss_dssp             HGGGS-CTTCEEEECCS
T ss_pred             hhhhc-ccccceeeccc
Confidence            87665 33445555544

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=97.19  E-value=0.0012  Score=48.43  Aligned_cols=75  Identities=12%  Similarity=0.213  Sum_probs=50.5

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCE-EEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            2 TALVTGGTRGIGHATVEELARFGAI-VHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      +++|.|+ |++|...++.+...|+. |+++++++++++.. +++   +.. .+  .|..+.+    ..+++.+..++.+|
T Consensus        31 ~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a-~~~---Ga~-~~--i~~~~~~----~~~~i~~~t~gg~D   98 (174)
T d1f8fa2          31 SFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQL---GAT-HV--INSKTQD----PVAAIKEITDGGVN   98 (174)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHH---TCS-EE--EETTTSC----HHHHHHHHTTSCEE
T ss_pred             EEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHH-HHc---CCe-EE--EeCCCcC----HHHHHHHHcCCCCc
Confidence            6899987 89999999999888985 56677888776554 333   322 22  3444422    23344444446799


Q ss_pred             EEEEcCCC
Q 024994           81 ILINNAAI   88 (259)
Q Consensus        81 ~vi~~ag~   88 (259)
                      ++|.+.|.
T Consensus        99 ~vid~~G~  106 (174)
T d1f8fa2          99 FALESTGS  106 (174)
T ss_dssp             EEEECSCC
T ss_pred             EEEEcCCc
Confidence            99999994

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.18  E-value=0.0066  Score=44.38  Aligned_cols=114  Identities=11%  Similarity=0.037  Sum_probs=65.3

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCC---C----EEEEeeCCh--hHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHH
Q 024994            2 TALVTGGTRGIGHATVEELARFG---A----IVHTCSRNQ--IELDARLHEWKNKG-FKVTGSVCDLSSREQREKLIETV   71 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G---~----~V~~~~r~~--~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~   71 (259)
                      +|.||||+|.||.+++..|++..   .    .+.+.+.+.  +.++....++++.. .....+..- ++..+   .    
T Consensus        26 kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~-~~~~~---~----   97 (175)
T d7mdha1          26 NIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIG-IDPYE---V----   97 (175)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE-SCHHH---H----
T ss_pred             EEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCcccc-ccchh---h----
Confidence            58999999999999999999753   2    456666554  34555555555442 222222222 22111   1    


Q ss_pred             HHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC-C-CCEEEEecC
Q 024994           72 TSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-G-NGSIVFISS  137 (259)
Q Consensus        72 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~-~~~ii~isS  137 (259)
                         + ...|++|..+|....   ...+.   .+.++.|..    +.+...+.+.+. . ...|+.++-
T Consensus        98 ---~-~~aDvVvi~ag~~rk---pg~tR---~Dll~~N~~----I~k~~~~~i~~~a~~~~~vlvv~N  151 (175)
T d7mdha1          98 ---F-EDVDWALLIGAKPRG---PGMER---AALLDINGQ----IFADQGKALNAVASKNVKVLVVGN  151 (175)
T ss_dssp             ---T-TTCSEEEECCCCCCC---TTCCH---HHHHHHHHH----HHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             ---c-cCCceEEEeeccCCC---CCCcH---HHHHHHHHH----HHHHHHHHHHhhCCCCcEEEEecC
Confidence               2 579999999997522   22343   334455544    444444555553 3 345655554

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=97.16  E-value=0.0014  Score=46.40  Aligned_cols=112  Identities=9%  Similarity=0.008  Sum_probs=64.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC--EEEEeeCChhHHHHHHHHHHhc---CCcEEEEEecCCCHHHHHHHHHHHHHHc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNK---GFKVTGSVCDLSSREQREKLIETVTSIF   75 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (259)
                      +++.|+|+ |.+|.+++..++.++.  .++++|++++..+....++...   .........|   .++           .
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~---~~~-----------~   66 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD---YSD-----------V   66 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C---GGG-----------G
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCc---HHH-----------h
Confidence            35778897 9999999999999986  7999999998766666666542   1122222111   111           1


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC-CCCEEEEecCC
Q 024994           76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSV  138 (259)
Q Consensus        76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~isS~  138 (259)
                       ..-|++|..||.....      .+.-.+.+..|..-.-.+    .+.+.+. .++.++++|-.
T Consensus        67 -~~adivvitag~~~~~------~~~r~~l~~~N~~i~~~i----~~~i~~~~p~ai~ivvtNP  119 (142)
T d1y6ja1          67 -KDCDVIVVTAGANRKP------GETRLDLAKKNVMIAKEV----TQNIMKYYNHGVILVVSNP  119 (142)
T ss_dssp             -TTCSEEEECCCC------------CHHHHHHHHHHHHHHH----HHHHHHHCCSCEEEECSSS
T ss_pred             -CCCceEEEecccccCc------CcchhHHhhHHHHHHHHH----HHHhhccCCCceEEEecCh
Confidence             4689999999964221      112234455665444444    4444543 35667766653

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=97.14  E-value=0.0017  Score=47.66  Aligned_cols=85  Identities=15%  Similarity=0.181  Sum_probs=61.6

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHH---------------HhcCCcEEEEEecCCCHHHHHH
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEW---------------KNKGFKVTGSVCDLSSREQREK   66 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---------------~~~~~~~~~~~~D~~~~~~~~~   66 (259)
                      ++-|.|- |-+|.++|+.|+++|++|++.+|+.++.+++.++-               .+.-.....+...+.+.+.+..
T Consensus         4 nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~v~~   82 (176)
T d2pgda2           4 DIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVDN   82 (176)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHHH
T ss_pred             cEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCchHHHHH
Confidence            4567777 99999999999999999999999999988765431               1111123445556777788888


Q ss_pred             HHHHHHHHcCCCccEEEEcCCC
Q 024994           67 LIETVTSIFQGKLNILINNAAI   88 (259)
Q Consensus        67 ~~~~~~~~~~~~id~vi~~ag~   88 (259)
                      +.+.+.... .+=+++|.+...
T Consensus        83 v~~~l~~~~-~~g~iiid~sT~  103 (176)
T d2pgda2          83 FIEKLVPLL-DIGDIIIDGGNS  103 (176)
T ss_dssp             HHHHHHHHC-CTTCEEEECSCC
T ss_pred             HHHHHHhcc-ccCcEEEecCcc
Confidence            888887766 345677777653

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.13  E-value=0.0021  Score=45.94  Aligned_cols=75  Identities=15%  Similarity=0.030  Sum_probs=58.8

Q ss_pred             EEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCccEE
Q 024994            3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNIL   82 (259)
Q Consensus         3 ~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~v   82 (259)
                      ++|.|. +.+|..+++.|.++|..|++++.+++.......+..  ...+.++.+|.+|++.++++--       .+.|.+
T Consensus         6 iII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~--~~~~~vi~Gd~~d~~~L~~a~i-------~~a~~v   75 (153)
T d1id1a_           6 FIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL--GDNADVIPGDSNDSSVLKKAGI-------DRCRAI   75 (153)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH--CTTCEEEESCTTSHHHHHHHTT-------TTCSEE
T ss_pred             EEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhh--cCCcEEEEccCcchHHHHHhcc-------ccCCEE
Confidence            677777 899999999999999999999999877665555543  3367888999999887666521       467888


Q ss_pred             EEcCC
Q 024994           83 INNAA   87 (259)
Q Consensus        83 i~~ag   87 (259)
                      |.+..
T Consensus        76 i~~~~   80 (153)
T d1id1a_          76 LALSD   80 (153)
T ss_dssp             EECSS
T ss_pred             EEccc
Confidence            87765

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=97.12  E-value=0.0015  Score=47.98  Aligned_cols=78  Identities=14%  Similarity=0.076  Sum_probs=50.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      .+|+|.|+ |+||...++.+...|+ +|+++++++++++.. +++   +.... +...-.+ +......+..   .++.+
T Consensus        30 ~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a-~~~---Ga~~~-i~~~~~~-~~~~~~~~~~---~~~G~   99 (174)
T d1e3ia2          30 STCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKA-KAL---GATDC-LNPRELD-KPVQDVITEL---TAGGV   99 (174)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHT---TCSEE-ECGGGCS-SCHHHHHHHH---HTSCB
T ss_pred             CEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHH-HHh---CCCcc-cCCccch-hhhhhhHhhh---hcCCC
Confidence            37899975 9999999999999998 688899999887543 333   32222 2111111 1222233222   23579


Q ss_pred             cEEEEcCCC
Q 024994           80 NILINNAAI   88 (259)
Q Consensus        80 d~vi~~ag~   88 (259)
                      |++|.++|.
T Consensus       100 d~vie~~G~  108 (174)
T d1e3ia2         100 DYSLDCAGT  108 (174)
T ss_dssp             SEEEESSCC
T ss_pred             cEEEEeccc
Confidence            999999994

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.11  E-value=0.00024  Score=52.09  Aligned_cols=75  Identities=23%  Similarity=0.210  Sum_probs=50.5

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCccE
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNI   81 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~   81 (259)
                      +|||+||+||+|...++.....|++|+.+.+++++.+.+. ++   +....+   |   .++.  ..+......++.+|+
T Consensus        26 ~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~-~l---Gad~vi---~---~~~~--~~~~~~~~~~~gvd~   93 (167)
T d1tt7a2          26 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK-QL---GASEVI---S---REDV--YDGTLKALSKQQWQG   93 (167)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH-HH---TCSEEE---E---HHHH--CSSCCCSSCCCCEEE
T ss_pred             EEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHH-hh---cccceE---e---ccch--hchhhhcccCCCceE
Confidence            6999999999999999988888999999999988875543 33   333221   1   1110  111111122246999


Q ss_pred             EEEcCCC
Q 024994           82 LINNAAI   88 (259)
Q Consensus        82 vi~~ag~   88 (259)
                      +|.+.|.
T Consensus        94 vid~vgg  100 (167)
T d1tt7a2          94 AVDPVGG  100 (167)
T ss_dssp             EEESCCT
T ss_pred             EEecCcH
Confidence            9999884

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.09  E-value=0.0016  Score=47.34  Aligned_cols=74  Identities=14%  Similarity=0.079  Sum_probs=49.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      .+++|.|+ |++|...++.+...|++|+++++++++++.. +++   +....+...+-.+      ..    +...+.+|
T Consensus        29 ~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a-~~l---Ga~~~i~~~~~~~------~~----~~~~~~~d   93 (168)
T d1piwa2          29 KKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDA-MKM---GADHYIATLEEGD------WG----EKYFDTFD   93 (168)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHH-HHH---TCSEEEEGGGTSC------HH----HHSCSCEE
T ss_pred             CEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHh-hcc---CCcEEeeccchHH------HH----Hhhhcccc
Confidence            47899987 8999999988888899999999999887654 333   3232221122211      11    11225799


Q ss_pred             EEEEcCCCC
Q 024994           81 ILINNAAIA   89 (259)
Q Consensus        81 ~vi~~ag~~   89 (259)
                      +++.+.+..
T Consensus        94 ~vi~~~~~~  102 (168)
T d1piwa2          94 LIVVCASSL  102 (168)
T ss_dssp             EEEECCSCS
T ss_pred             eEEEEecCC
Confidence            999998754

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=97.09  E-value=0.0071  Score=42.64  Aligned_cols=112  Identities=12%  Similarity=0.068  Sum_probs=68.8

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCC--EEEEeeCChhHHHHHHHHHHhc---CCcEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024994            2 TALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNK---GFKVTGSVCDLSSREQREKLIETVTSIFQ   76 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (259)
                      ++.|+|+ |.+|.++|..++.+|.  .++++++++++.+....+++..   .....+...+  +.+.    +        
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~--~~~~----~--------   67 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSD--DPEI----C--------   67 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEES--CGGG----G--------
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCC--CHHH----h--------
Confidence            5778897 9999999999999986  7999999998877666666532   1122222222  1111    1        


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC-CCCEEEEecCC
Q 024994           77 GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSV  138 (259)
Q Consensus        77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~isS~  138 (259)
                      ..-|++|..||....   ...+..   +.+..|..=.-.+    .+.+.+. .++.++++|-.
T Consensus        68 ~daDvVVitaG~~~~---~g~~R~---dl~~~N~~i~~~i----~~~i~~~~p~ai~ivvtNP  120 (143)
T d1llda1          68 RDADMVVITAGPRQK---PGQSRL---ELVGATVNILKAI----MPNLVKVAPNAIYMLITNP  120 (143)
T ss_dssp             TTCSEEEECCCCCCC---TTCCHH---HHHHHHHHHHHHH----HHHHHHHCTTSEEEECCSS
T ss_pred             hCCcEEEEecccccC---CCCchh---hhhhhhHHHHHHH----HHHHHhhCCCeEEEEeCCc
Confidence            357999999997432   123332   3455665433334    4444443 34666666653

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.08  E-value=0.0079  Score=42.33  Aligned_cols=111  Identities=10%  Similarity=0.002  Sum_probs=68.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC--EEEEeeCChhHHHHHHHHHHhc----CCcEEEEE-ecCCCHHHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNK----GFKVTGSV-CDLSSREQREKLIETVTS   73 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~-~D~~~~~~~~~~~~~~~~   73 (259)
                      |++.|+|+ |.+|.++|..|+.+|.  .++++|++++..+....+++..    ........ .|..   .          
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~~---~----------   66 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYS---L----------   66 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCGG---G----------
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCHH---H----------
Confidence            57888896 9999999999999885  6999999998876655555431    22222222 2322   1          


Q ss_pred             HcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecC
Q 024994           74 IFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISS  137 (259)
Q Consensus        74 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS  137 (259)
                       + ..-|++|..||.....   ..+.   .+.+..|..    +.+...+.+.+.. ++.++++|-
T Consensus        67 -~-~~adiVvitag~~~~~---g~~r---~~l~~~n~~----i~~~i~~~i~~~~p~aivivvtN  119 (142)
T d1ojua1          67 -L-KGSEIIVVTAGLARKP---GMTR---LDLAHKNAG----IIKDIAKKIVENAPESKILVVTN  119 (142)
T ss_dssp             -G-TTCSEEEECCCCCCCS---SCCH---HHHHHHHHH----HHHHHHHHHHTTSTTCEEEECSS
T ss_pred             -h-ccccEEEEeccccCCC---CCch---HHHHHHhhH----HHHHHHHHHHhhCCCcEEEEecC
Confidence             1 4689999999964321   1222   333444544    3444445445543 456666655

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.07  E-value=0.0031  Score=46.18  Aligned_cols=78  Identities=14%  Similarity=0.105  Sum_probs=51.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      .+++|+|+ ||+|...++.+...|+ +|+.+++++++++.. +++   +....+-.-|-.+  ..+.+.+.   ..+..+
T Consensus        31 ~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~A-k~~---GA~~~in~~~~~~--~~~~~~~~---~~g~G~  100 (176)
T d1d1ta2          31 STCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKA-MAV---GATECISPKDSTK--PISEVLSE---MTGNNV  100 (176)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHH---TCSEEECGGGCSS--CHHHHHHH---HHTSCC
T ss_pred             CEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHH-Hhc---CCcEEECccccch--HHHHHHHH---hccccc
Confidence            37899986 9999999999999995 899999999998754 333   3333221122221  11222221   123469


Q ss_pred             cEEEEcCCC
Q 024994           80 NILINNAAI   88 (259)
Q Consensus        80 d~vi~~ag~   88 (259)
                      |++|.+.|.
T Consensus       101 d~vi~~~g~  109 (176)
T d1d1ta2         101 GYTFEVIGH  109 (176)
T ss_dssp             CEEEECSCC
T ss_pred             eEEEEeCCc
Confidence            999999994

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.04  E-value=0.001  Score=48.81  Aligned_cols=75  Identities=15%  Similarity=0.167  Sum_probs=51.1

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC-Cc
Q 024994            2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG-KL   79 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~-~i   79 (259)
                      +++|.|+ |++|...++.+...|+ +|+++++++++++.. +++   +.. ++  +|..+.+..    +++.+..++ .+
T Consensus        30 ~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a-~~l---Ga~-~~--i~~~~~~~~----~~v~~~t~g~G~   97 (174)
T d1jqba2          30 SVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAA-KFY---GAT-DI--LNYKNGHIE----DQVMKLTNGKGV   97 (174)
T ss_dssp             CEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHH-HHH---TCS-EE--ECGGGSCHH----HHHHHHTTTSCE
T ss_pred             EEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHH-Hhh---Ccc-cc--ccccchhHH----HHHHHHhhccCc
Confidence            6889986 8999999999999997 799999999887554 333   321 22  344332222    333333323 49


Q ss_pred             cEEEEcCCC
Q 024994           80 NILINNAAI   88 (259)
Q Consensus        80 d~vi~~ag~   88 (259)
                      |++|.++|.
T Consensus        98 D~vid~~g~  106 (174)
T d1jqba2          98 DRVIMAGGG  106 (174)
T ss_dssp             EEEEECSSC
T ss_pred             ceEEEccCC
Confidence            999999995

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.03  E-value=0.0012  Score=47.14  Aligned_cols=79  Identities=13%  Similarity=0.132  Sum_probs=53.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++.|.||.|-+|..+++.|.++|++|.+.+|+.....+...    ......+...++   ..+..++.++.... .+=.
T Consensus        10 ~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~----~~~~~v~~~~~~---~~~~~v~~~~~~~~-~~~~   81 (152)
T d2pv7a2          10 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESIL----ANADVVIVSVPI---NLTLETIERLKPYL-TENM   81 (152)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHH----TTCSEEEECSCG---GGHHHHHHHHGGGC-CTTS
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhh----hhccccccccch---hhheeeeecccccc-cCCc
Confidence            579999999999999999999999999999998866544321    122344333333   45555666665554 2233


Q ss_pred             EEEEcCC
Q 024994           81 ILINNAA   87 (259)
Q Consensus        81 ~vi~~ag   87 (259)
                      +++..++
T Consensus        82 iiiD~~S   88 (152)
T d2pv7a2          82 LLADLTS   88 (152)
T ss_dssp             EEEECCS
T ss_pred             eEEEecc
Confidence            5555554

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.00  E-value=0.0056  Score=43.12  Aligned_cols=111  Identities=10%  Similarity=0.073  Sum_probs=66.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhc----CCcEEEEE-ecCCCHHHHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNK----GFKVTGSV-CDLSSREQREKLIETVTSI   74 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~-~D~~~~~~~~~~~~~~~~~   74 (259)
                      |++.|+|+ |.+|.++|..|+.++. ++++++.+++..+....++...    .....+.. .|..+              
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~~--------------   66 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYAD--------------   66 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGG--------------
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHHH--------------
Confidence            57888896 9999999999999885 8999999888776655555422    11222221 22221              


Q ss_pred             cCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCC-CCEEEEecC
Q 024994           75 FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISS  137 (259)
Q Consensus        75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~isS  137 (259)
                      . ..-|++|.+||.....      .++-.+.+..|.    .+.+...+.+.+.. ++.++++|-
T Consensus        67 ~-~~advvvitag~~~~~------~~~r~dl~~~N~----~i~~~i~~~i~k~~p~aivivvtN  119 (142)
T d1uxja1          67 T-ANSDVIVVTSGAPRKP------GMSREDLIKVNA----DITRACISQAAPLSPNAVIIMVNN  119 (142)
T ss_dssp             G-TTCSEEEECCSCC---------------CHHHHH----HHHHHHHHHHGGGCTTCEEEECSS
T ss_pred             h-cCCCEEEEeeeccCCc------CcchhHHHhHHH----HHHHHHHHHHhccCCCceEEEeCC
Confidence            1 4689999999975321      111223344554    35555566666543 456665554

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.98  E-value=0.0039  Score=44.86  Aligned_cols=86  Identities=13%  Similarity=0.084  Sum_probs=58.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHH-------hcCCcEEEEEecCCCHHHHHHHH---HH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK-------NKGFKVTGSVCDLSSREQREKLI---ET   70 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-------~~~~~~~~~~~D~~~~~~~~~~~---~~   70 (259)
                      |++-|.|- |-+|..+|+.|+++|++|++.+|++++.+++.+.-.       +.-.+..++..-+.+.+.++.++   +.
T Consensus         1 MkIgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~~~~~~   79 (161)
T d1vpda2           1 MKVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENG   79 (161)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred             CEEEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHHhCCcc
Confidence            46777776 999999999999999999999999998876643210       00113445556677788888776   33


Q ss_pred             HHHHcCCCccEEEEcCCC
Q 024994           71 VTSIFQGKLNILINNAAI   88 (259)
Q Consensus        71 ~~~~~~~~id~vi~~ag~   88 (259)
                      +.... .+-+++|.+...
T Consensus        80 ~~~~~-~~g~iiid~sT~   96 (161)
T d1vpda2          80 IIEGA-KPGTVLIDMSSI   96 (161)
T ss_dssp             HHHHC-CTTCEEEECSCC
T ss_pred             hhhcc-CCCCEEEECCCC
Confidence            44443 344566666553

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.98  E-value=0.001  Score=49.70  Aligned_cols=44  Identities=18%  Similarity=0.134  Sum_probs=38.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK   45 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~   45 (259)
                      |++.|.|+ |-+|..+|..++.+|++|++.+++++.++...+.++
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~   48 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIE   48 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHH
Confidence            68899999 889999999999999999999999988776655543

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.98  E-value=0.0031  Score=45.56  Aligned_cols=74  Identities=18%  Similarity=0.241  Sum_probs=48.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      .+++|.|+ |++|...++.+...|++|+.+++++++++... ++   +....   .|.++.+..+++.+    .. ...+
T Consensus        29 ~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~-~~---Ga~~~---i~~~~~~~~~~~~~----~~-~g~~   95 (166)
T d1llua2          29 QWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELAR-KL---GASLT---VNARQEDPVEAIQR----DI-GGAH   95 (166)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HT---TCSEE---EETTTSCHHHHHHH----HH-SSEE
T ss_pred             CEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhh-cc---Ccccc---ccccchhHHHHHHH----hh-cCCc
Confidence            37899886 99999999999899999999999998876542 22   33222   34444444333332    23 3455


Q ss_pred             EEEEcCC
Q 024994           81 ILINNAA   87 (259)
Q Consensus        81 ~vi~~ag   87 (259)
                      .+|-+++
T Consensus        96 ~~i~~~~  102 (166)
T d1llua2          96 GVLVTAV  102 (166)
T ss_dssp             EEEECCS
T ss_pred             ccccccc
Confidence            5555555

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=96.97  E-value=0.003  Score=45.80  Aligned_cols=72  Identities=15%  Similarity=0.240  Sum_probs=51.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      .+|+|.|+ |++|...++.+...|+++++++++.++.+ ..+++   +....   .|..+.+....       .. +.+|
T Consensus        32 ~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~-~a~~l---Gad~~---i~~~~~~~~~~-------~~-~~~D   95 (168)
T d1uufa2          32 KKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKRE-AAKAL---GADEV---VNSRNADEMAA-------HL-KSFD   95 (168)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHHH---TCSEE---EETTCHHHHHT-------TT-TCEE
T ss_pred             CEEEEecc-chHHHHHHHHhhcccccchhhccchhHHH-HHhcc---CCcEE---EECchhhHHHH-------hc-CCCc
Confidence            47899986 89999999999889999999999988864 33444   32222   45555543221       11 4799


Q ss_pred             EEEEcCCC
Q 024994           81 ILINNAAI   88 (259)
Q Consensus        81 ~vi~~ag~   88 (259)
                      ++|.+.|.
T Consensus        96 ~vid~~g~  103 (168)
T d1uufa2          96 FILNTVAA  103 (168)
T ss_dssp             EEEECCSS
T ss_pred             eeeeeeec
Confidence            99999985

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.94  E-value=0.0011  Score=49.62  Aligned_cols=78  Identities=17%  Similarity=0.188  Sum_probs=50.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      .+|||.|+ |++|...+..+...|+ +|+++++++++++... +   .+.. +  ..|-.+. ++.+.+.++.  -+..+
T Consensus        27 ~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~-~---~Ga~-~--~~~~~~~-~~~~~i~~~t--~g~g~   95 (195)
T d1kola2          27 STVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK-A---QGFE-I--ADLSLDT-PLHEQIAALL--GEPEV   95 (195)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-H---TTCE-E--EETTSSS-CHHHHHHHHH--SSSCE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhh-h---cccc-E--EEeCCCc-CHHHHHHHHh--CCCCc
Confidence            37899986 8999888888878887 7999999998876543 2   2322 1  1233332 2222222221  12369


Q ss_pred             cEEEEcCCCC
Q 024994           80 NILINNAAIA   89 (259)
Q Consensus        80 d~vi~~ag~~   89 (259)
                      |++|.+.|..
T Consensus        96 D~vid~vG~~  105 (195)
T d1kola2          96 DCAVDAVGFE  105 (195)
T ss_dssp             EEEEECCCTT
T ss_pred             EEEEECcccc
Confidence            9999999954

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.85  E-value=0.0013  Score=48.23  Aligned_cols=41  Identities=24%  Similarity=0.100  Sum_probs=37.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLH   42 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~   42 (259)
                      |++-|.|+ |.+|.++|..|+++|++|.+.+|+++..+...+
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~   42 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQD   42 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence            78999999 999999999999999999999999988766543

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=96.81  E-value=0.005  Score=44.03  Aligned_cols=117  Identities=13%  Similarity=0.002  Sum_probs=68.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhc----CCcEEEEEecCCCHHHHHHHHHHHHHHc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNK----GFKVTGSVCDLSSREQREKLIETVTSIF   75 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (259)
                      +++.|.|+ |.+|..+|..|+.++. ++++++.+++..+....++...    +.+... .. -++.++   .+       
T Consensus         8 ~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~-~~-~~~~~~---~~-------   74 (154)
T d1pzga1           8 KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSV-RA-EYSYEA---AL-------   74 (154)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCE-EE-ECSHHH---HH-------
T ss_pred             CcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEE-ec-cCchhh---hh-------
Confidence            47888997 9999999999998885 8999999988776665555431    111111 11 122211   11       


Q ss_pred             CCCccEEEEcCCCCCC-CC-CCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC-CCCEEEEecCC
Q 024994           76 QGKLNILINNAAIAFV-KP-TVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSV  138 (259)
Q Consensus        76 ~~~id~vi~~ag~~~~-~~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~isS~  138 (259)
                       ..-|++|..+|.... +. ..+.+.   .+.+..|..-...+.+.+    .+. .++.++++|..
T Consensus        75 -~~adiVvitag~~~~~g~~~~~~tR---~~l~~~n~~iv~~i~~~i----~~~~p~aiviivsNP  132 (154)
T d1pzga1          75 -TGADCVIVTAGLTKVPGKPDSEWSR---NDLLPFNSKIIREIGQNI----KKYCPKTFIIVVTNP  132 (154)
T ss_dssp             -TTCSEEEECCSCSSCTTCCGGGCCG---GGGHHHHHHHHHHHHHHH----HHHCTTCEEEECCSS
T ss_pred             -cCCCeEEEecccccCCCCCCcccch---hhhhhhhHHHHHHHHHHH----HhcCCCcEEEEeCCc
Confidence             468999999997532 21 111221   222344554444444433    443 35666666653

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.75  E-value=0.024  Score=40.20  Aligned_cols=78  Identities=17%  Similarity=0.101  Sum_probs=47.6

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCC-------EEEEeeCCh--hHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHH
Q 024994            2 TALVTGGTRGIGHATVEELARFGA-------IVHTCSRNQ--IELDARLHEWKNK-GFKVTGSVCDLSSREQREKLIETV   71 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~   71 (259)
                      +|.|+||+|.+|.+++..|+..+.       .+++.+.+.  .+++....++... ......+..--.+.+.        
T Consensus         5 KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--------   76 (154)
T d5mdha1           5 RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIA--------   76 (154)
T ss_dssp             EEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHH--------
T ss_pred             EEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccCcccccc--------
Confidence            689999999999999999987642       366666544  3444444444432 2222222221111111        


Q ss_pred             HHHcCCCccEEEEcCCCCCC
Q 024994           72 TSIFQGKLNILINNAAIAFV   91 (259)
Q Consensus        72 ~~~~~~~id~vi~~ag~~~~   91 (259)
                         + ...|++|..+|....
T Consensus        77 ---~-~~~dvVVitag~~~~   92 (154)
T d5mdha1          77 ---F-KDLDVAILVGSMPRR   92 (154)
T ss_dssp             ---T-TTCSEEEECCSCCCC
T ss_pred             ---c-CCceEEEEecccCCC
Confidence               1 479999999997643

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.69  E-value=0.0018  Score=47.45  Aligned_cols=77  Identities=16%  Similarity=0.159  Sum_probs=51.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHH-HHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE-QREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~~   78 (259)
                      .+|+|.|+ |++|...++.+...|+ +|+.+++++++++... ++   +....   .|.++.+ .+.+..+.   ..++.
T Consensus        29 ~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~-~l---Ga~~~---i~~~~~d~~~~~~~~~---~~~~G   97 (174)
T d1p0fa2          29 STCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-EL---GATEC---LNPKDYDKPIYEVICE---KTNGG   97 (174)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HT---TCSEE---ECGGGCSSCHHHHHHH---HTTSC
T ss_pred             CEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHH-Hc---CCcEE---EcCCCchhHHHHHHHH---hcCCC
Confidence            37899986 8999999999999996 7999999999986543 22   32222   2322211 12222222   22356


Q ss_pred             ccEEEEcCCC
Q 024994           79 LNILINNAAI   88 (259)
Q Consensus        79 id~vi~~ag~   88 (259)
                      +|++|-++|.
T Consensus        98 ~d~vid~~g~  107 (174)
T d1p0fa2          98 VDYAVECAGR  107 (174)
T ss_dssp             BSEEEECSCC
T ss_pred             CcEEEEcCCC
Confidence            9999999984

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.69  E-value=0.0015  Score=47.70  Aligned_cols=77  Identities=14%  Similarity=0.132  Sum_probs=49.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCC-CHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLS-SREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~~~~   78 (259)
                      .++||.|+ ||+|...++.+...|+ +|+.+++++++++. .+++   +..- ++  |.. +.+.+.+.+++   ..++.
T Consensus        30 ~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~-ak~l---Ga~~-~i--~~~~~~~~~~~~~~~---~~~~g   98 (176)
T d2fzwa2          30 SVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFAR-AKEF---GATE-CI--NPQDFSKPIQEVLIE---MTDGG   98 (176)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHH-HHHH---TCSE-EE--CGGGCSSCHHHHHHH---HTTSC
T ss_pred             CEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHH-HHHh---CCcE-EE--eCCchhhHHHHHHHH---HcCCC
Confidence            37899998 5999999999999996 67888888888654 4444   3222 21  221 11223333333   23357


Q ss_pred             ccEEEEcCCC
Q 024994           79 LNILINNAAI   88 (259)
Q Consensus        79 id~vi~~ag~   88 (259)
                      +|++|.+.|.
T Consensus        99 ~D~vid~~G~  108 (176)
T d2fzwa2          99 VDYSFECIGN  108 (176)
T ss_dssp             BSEEEECSCC
T ss_pred             CcEeeecCCC
Confidence            9999999984

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.61  E-value=0.0015  Score=48.42  Aligned_cols=44  Identities=20%  Similarity=0.132  Sum_probs=38.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK   45 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~   45 (259)
                      |++.|.|+ |-+|..+|..|+.+|++|++.+++++.+++..+.+.
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~   48 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAA   48 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhh
Confidence            56889999 889999999999999999999999988776655543

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.58  E-value=0.016  Score=41.00  Aligned_cols=115  Identities=10%  Similarity=0.022  Sum_probs=68.3

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhc----CCcEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024994            2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNK----GFKVTGSVCDLSSREQREKLIETVTSIFQ   76 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (259)
                      ++.|.|+ |.+|.+++..|..++. +++++|++++..+....++...    +.+......+-  .+.           . 
T Consensus         5 KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~~--~~~-----------~-   69 (150)
T d1t2da1           5 KIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNT--YDD-----------L-   69 (150)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECC--GGG-----------G-
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEeccc--ccc-----------c-
Confidence            6788896 9999999998888885 7999999988776665555431    22333333221  111           1 


Q ss_pred             CCccEEEEcCCCCC-CCCC-CCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhC-CCCEEEEecCC
Q 024994           77 GKLNILINNAAIAF-VKPT-VDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSV  138 (259)
Q Consensus        77 ~~id~vi~~ag~~~-~~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~isS~  138 (259)
                      ..-|++|.++|... ++.. .+.+.   .+.+..|..    +.+.+.+.+.+. .++.++++|-.
T Consensus        70 ~~advvvitag~~~~~g~~~~~~~R---~~l~~~N~~----iv~~i~~~i~~~~p~aivivvtNP  127 (150)
T d1t2da1          70 AGADVVIVTAGFTKAPGKSDKEWNR---DDLLPLNNK----IMIEIGGHIKKNCPNAFIIVVTNP  127 (150)
T ss_dssp             TTCSEEEECCSCSSCTTCCSTTCCG---GGGHHHHHH----HHHHHHHHHHHHCTTSEEEECSSS
T ss_pred             CCCcEEEEecccccCCCCCccccch---hHHHHHHHH----HHHHHHHHHHhcCCCeEEEEecCc
Confidence            46899999999753 2211 11111   223445543    444444444543 34666766654

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=96.57  E-value=0.02  Score=41.14  Aligned_cols=75  Identities=17%  Similarity=0.191  Sum_probs=57.5

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCccE
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNI   81 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~   81 (259)
                      +++|.|+ |-.|.+.++....-|++|.+.|.+.++++.+......   .+   ..-.++.+.+++.++        .-|+
T Consensus        34 ~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~---~~---~~~~~~~~~l~~~~~--------~aDi   98 (168)
T d1pjca1          34 KVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS---RV---ELLYSNSAEIETAVA--------EADL   98 (168)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG---GS---EEEECCHHHHHHHHH--------TCSE
T ss_pred             EEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcc---cc---eeehhhhhhHHHhhc--------cCcE
Confidence            6889998 8999999999999999999999999998876655432   22   233456666655543        6799


Q ss_pred             EEEcCCCCCC
Q 024994           82 LINNAAIAFV   91 (259)
Q Consensus        82 vi~~ag~~~~   91 (259)
                      ||.++-+...
T Consensus        99 vI~aalipG~  108 (168)
T d1pjca1          99 LIGAVLVPGR  108 (168)
T ss_dssp             EEECCCCTTS
T ss_pred             EEEeeecCCc
Confidence            9999987543

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.55  E-value=0.0054  Score=44.54  Aligned_cols=76  Identities=16%  Similarity=0.183  Sum_probs=49.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      .++||.|+ |++|...++.+...|+ +|+.+++++++++... +   .+.. .+  .|..+ +.++...+..   .+..+
T Consensus        34 ~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~-~---~ga~-~~--i~~~~-~~~~~~~~~~---~~~g~  101 (172)
T d1h2ba2          34 AYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-R---LGAD-HV--VDARR-DPVKQVMELT---RGRGV  101 (172)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-H---TTCS-EE--EETTS-CHHHHHHHHT---TTCCE
T ss_pred             CEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHh-h---cccc-ee--ecCcc-cHHHHHHHhh---CCCCc
Confidence            36889886 9999999999988886 7788889888765443 2   2322 22  23332 2333333221   22359


Q ss_pred             cEEEEcCCC
Q 024994           80 NILINNAAI   88 (259)
Q Consensus        80 d~vi~~ag~   88 (259)
                      |++|.++|.
T Consensus       102 d~vid~~g~  110 (172)
T d1h2ba2         102 NVAMDFVGS  110 (172)
T ss_dssp             EEEEESSCC
T ss_pred             eEEEEecCc
Confidence            999999994

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=96.48  E-value=0.0015  Score=47.10  Aligned_cols=36  Identities=22%  Similarity=0.225  Sum_probs=33.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIEL   37 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~   37 (259)
                      |+++|.|+ |.+|..++..|++.|++|.+++|+.+..
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~   36 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPY   36 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSE
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHh
Confidence            68999999 9999999999999999999999987644

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=96.45  E-value=0.0074  Score=45.93  Aligned_cols=68  Identities=25%  Similarity=0.160  Sum_probs=45.8

Q ss_pred             cchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCccEEEEcCCC
Q 024994            9 TRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAI   88 (259)
Q Consensus         9 s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~vi~~ag~   88 (259)
                      ||-.|.++|+++..+|++|.++.-....         .....+..  ..+...+++...+.+   .+ ...|++|++|.+
T Consensus        31 SGk~G~aiA~~~~~~Ga~V~li~g~~~~---------~~p~~~~~--~~~~t~~~m~~~~~~---~~-~~~D~~i~aAAv   95 (223)
T d1u7za_          31 SGKMGFAIAAAAARRGANVTLVSGPVSL---------PTPPFVKR--VDVMTALEMEAAVNA---SV-QQQNIFIGCAAV   95 (223)
T ss_dssp             CSHHHHHHHHHHHHTTCEEEEEECSCCC---------CCCTTEEE--EECCSHHHHHHHHHH---HG-GGCSEEEECCBC
T ss_pred             cHHHHHHHHHHHHHcCCchhhhhccccc---------Cccccccc--ceehhhHHHHHHHHh---hh-ccceeEeeeech
Confidence            7889999999999999999887654321         11123433  344555555444433   34 468999999998


Q ss_pred             CCC
Q 024994           89 AFV   91 (259)
Q Consensus        89 ~~~   91 (259)
                      ...
T Consensus        96 sDf   98 (223)
T d1u7za_          96 ADY   98 (223)
T ss_dssp             CSE
T ss_pred             hhh
Confidence            744

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.42  E-value=0.0076  Score=40.74  Aligned_cols=34  Identities=26%  Similarity=0.260  Sum_probs=30.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChh
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI   35 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~   35 (259)
                      |+++|.|| |.+|.++|..|.+.|.+|.++.|.+.
T Consensus        23 ~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          23 KSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            57899998 99999999999999999999988664

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.41  E-value=0.0029  Score=46.38  Aligned_cols=44  Identities=20%  Similarity=0.199  Sum_probs=38.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHh
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKN   46 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   46 (259)
                      |+|||.|+ ||.+++++..|.+.| +|.++.|+.++.+.+.+++.+
T Consensus        19 k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~   62 (177)
T d1nvta1          19 KNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAE   62 (177)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHH
T ss_pred             CEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHH
Confidence            68999988 889999999998777 999999999999888877753

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.39  E-value=0.029  Score=40.21  Aligned_cols=85  Identities=11%  Similarity=0.112  Sum_probs=55.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC--EEEEeeCChhHHHHHHHHHH-h---------cCCcEEEEEecCCCHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWK-N---------KGFKVTGSVCDLSSREQREKLI   68 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~-~---------~~~~~~~~~~D~~~~~~~~~~~   68 (259)
                      |+++|.|. |-+|.++|+.|.+.|+  +|++.+++++.++.+.+.-. .         ......++..-+ -.+.+..++
T Consensus         2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIila~-p~~~~~~vl   79 (171)
T d2g5ca2           2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSS-PVRTFREIA   79 (171)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECS-CHHHHHHHH
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhccccccccccC-Cchhhhhhh
Confidence            67999986 9999999999999996  78999999988776544311 0         000112222222 256777788


Q ss_pred             HHHHHHcCCCccEEEEcCCC
Q 024994           69 ETVTSIFQGKLNILINNAAI   88 (259)
Q Consensus        69 ~~~~~~~~~~id~vi~~ag~   88 (259)
                      +++.... .+-.+++...+.
T Consensus        80 ~~l~~~~-~~~~ii~d~~s~   98 (171)
T d2g5ca2          80 KKLSYIL-SEDATVTDQGSV   98 (171)
T ss_dssp             HHHHHHS-CTTCEEEECCSC
T ss_pred             hhhhccc-cccccccccccc
Confidence            8887776 334455555553

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=96.37  E-value=0.013  Score=42.70  Aligned_cols=84  Identities=17%  Similarity=0.158  Sum_probs=55.2

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcC------------------CcEEEEEecCCCHHH
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG------------------FKVTGSVCDLSSREQ   63 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------------------~~~~~~~~D~~~~~~   63 (259)
                      ++-|.|- |-+|.+++++|+++|++|.+.+|++++.+++.++-....                  .....+..-+.+...
T Consensus         3 kIGvIGl-G~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (178)
T d1pgja2           3 DVGVVGL-GVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAA   81 (178)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHH
T ss_pred             EEEEEee-hHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEeecCcch
Confidence            3555655 999999999999999999999999999888766532110                  011223344445556


Q ss_pred             HHHHHHHHHHHcCCCccEEEEcCC
Q 024994           64 REKLIETVTSIFQGKLNILINNAA   87 (259)
Q Consensus        64 ~~~~~~~~~~~~~~~id~vi~~ag   87 (259)
                      +...+......+ .+=+++++...
T Consensus        82 ~~~~~~~~~~~~-~~~~iii~~st  104 (178)
T d1pgja2          82 TDSTIEQLKKVF-EKGDILVDTGN  104 (178)
T ss_dssp             HHHHHHHHHHHC-CTTCEEEECCC
T ss_pred             hhhhhhhhhhhc-cccceecccCc
Confidence            666666666655 34456666554

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=96.33  E-value=0.0071  Score=43.91  Aligned_cols=76  Identities=14%  Similarity=0.162  Sum_probs=48.8

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHH-HHHHHHHHHHHcCCCc
Q 024994            2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQ-REKLIETVTSIFQGKL   79 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~~~~i   79 (259)
                      +++|.|+ |++|...+..+...|. +|+.+++++++++... ++   +.. +++  |..+.+. .++..+..   .++.+
T Consensus        31 ~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~-~~---GAd-~~i--n~~~~~~~~~~~~~~~---~~~G~   99 (175)
T d1cdoa2          31 TCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VF---GAT-DFV--NPNDHSEPISQVLSKM---TNGGV   99 (175)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT---TCC-EEE--CGGGCSSCHHHHHHHH---HTSCB
T ss_pred             EEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHH-Hc---CCc-EEE--cCCCcchhHHHHHHhh---ccCCc
Confidence            7899986 7788888888888876 7999999999886543 22   322 222  3222211 22222222   22579


Q ss_pred             cEEEEcCCC
Q 024994           80 NILINNAAI   88 (259)
Q Consensus        80 d~vi~~ag~   88 (259)
                      |+++.+.|.
T Consensus       100 d~vid~~G~  108 (175)
T d1cdoa2         100 DFSLECVGN  108 (175)
T ss_dssp             SEEEECSCC
T ss_pred             ceeeeecCC
Confidence            999999994

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.30  E-value=0.0081  Score=41.03  Aligned_cols=34  Identities=21%  Similarity=0.211  Sum_probs=30.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChh
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI   35 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~   35 (259)
                      |+++|.|| |.||.++|..|.+.|.+|.++.+++.
T Consensus        24 ~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~   57 (122)
T d1v59a2          24 KRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQ   57 (122)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CeEEEECC-CchHHHHHHHHHhhCcceeEEEeccc
Confidence            67899998 99999999999999999999988653

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.29  E-value=0.012  Score=42.26  Aligned_cols=86  Identities=12%  Similarity=0.097  Sum_probs=56.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHH-------hcCCcEEEEEecCCCHHHHHHHHHH---
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK-------NKGFKVTGSVCDLSSREQREKLIET---   70 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-------~~~~~~~~~~~D~~~~~~~~~~~~~---   70 (259)
                      |+|-|.|- |-+|.++|++|.++|+.|.+.+|+.++.+.+...-.       +.-.....+..-+.+.+.++.++..   
T Consensus         2 ~kIg~IGl-G~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~~~~   80 (162)
T d3cuma2           2 KQIAFIGL-GHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDG   80 (162)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHSTTC
T ss_pred             CEEEEEEE-HHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhcccc
Confidence            46777765 999999999999999999999999988766543211       0011334555667777777776644   


Q ss_pred             HHHHcCCCccEEEEcCCC
Q 024994           71 VTSIFQGKLNILINNAAI   88 (259)
Q Consensus        71 ~~~~~~~~id~vi~~ag~   88 (259)
                      +.... .+=+++|.+...
T Consensus        81 ~~~~l-~~g~iiid~st~   97 (162)
T d3cuma2          81 LLAHI-APGTLVLECSTI   97 (162)
T ss_dssp             HHHHS-CTTCEEEECSCC
T ss_pred             ccccC-CCCCEEEECCCC
Confidence            33333 233566666654

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.24  E-value=0.011  Score=39.76  Aligned_cols=34  Identities=21%  Similarity=0.270  Sum_probs=30.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChh
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI   35 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~   35 (259)
                      |++||.|+ |.+|..-++.|.+.|++|++++....
T Consensus        13 k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~   46 (113)
T d1pjqa1          13 RDCLIVGG-GDVAERKARLLLEAGARLTVNALTFI   46 (113)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCC
Confidence            78999999 77999999999999999999886554

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.17  E-value=0.014  Score=41.85  Aligned_cols=39  Identities=21%  Similarity=0.238  Sum_probs=33.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDAR   40 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~   40 (259)
                      .++||.|+ |++|...++.+...|++|+++++++++++..
T Consensus        29 ~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~   67 (168)
T d1rjwa2          29 EWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELA   67 (168)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhh
Confidence            37888875 9999999999999999999999999887643

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.08  E-value=0.015  Score=39.72  Aligned_cols=33  Identities=15%  Similarity=0.180  Sum_probs=30.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCCh
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ   34 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~   34 (259)
                      |+++|.|| |.||.++|..|.+.|.+|.++.|.+
T Consensus        23 k~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          23 GRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEEcC-CccHHHHHHHHhcCCcEEEEEeecc
Confidence            67899998 7899999999999999999999864

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=96.07  E-value=0.012  Score=39.80  Aligned_cols=33  Identities=15%  Similarity=0.157  Sum_probs=30.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCCh
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ   34 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~   34 (259)
                      |+++|.|| |.+|.++|..|.+.|.+|.++.|.+
T Consensus        23 ~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          23 KKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            57889988 9999999999999999999999865

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=96.01  E-value=0.0073  Score=42.91  Aligned_cols=42  Identities=19%  Similarity=0.238  Sum_probs=36.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCC-CEEEEeeCChhHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHE   43 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~   43 (259)
                      |++.+.|+ |-+|.++++.|.+.| ++|++.+|+.++.+.+.++
T Consensus         1 MkI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~   43 (152)
T d1yqga2           1 MNVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKE   43 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHH
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhh
Confidence            57888887 999999999999888 8999999999988776654

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=95.94  E-value=0.022  Score=38.73  Aligned_cols=34  Identities=21%  Similarity=0.206  Sum_probs=30.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChh
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI   35 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~   35 (259)
                      |+++|.|| |.+|.++|..|.++|.+|.++.+.+.
T Consensus        31 ~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          31 SRLLIVGG-GVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CeEEEECc-chhHHHHHHHhhcccceEEEEeeccc
Confidence            57888888 99999999999999999999988764

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=95.93  E-value=0.0047  Score=42.62  Aligned_cols=71  Identities=15%  Similarity=0.030  Sum_probs=51.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |-++|.|. |.+|..+++.|  +|..|++++.+++..+....      ..+.++.+|.++++.++++-      . .+.+
T Consensus         1 kHivI~G~-g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~~~------~~~~~i~Gd~~~~~~L~~a~------i-~~A~   64 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLREL--RGSEVFVLAEDENVRKKVLR------SGANFVHGDPTRVSDLEKAN------V-RGAR   64 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTS--CGGGEEEEESCTTHHHHHHH------TTCEEEESCTTSHHHHHHTT------C-TTCS
T ss_pred             CEEEEECC-CHHHHHHHHHH--cCCCCEEEEcchHHHHHHHh------cCccccccccCCHHHHHHhh------h-hcCc
Confidence            55788886 88999999999  46678888888887665432      25778889999988776641      1 3577


Q ss_pred             EEEEcCC
Q 024994           81 ILINNAA   87 (259)
Q Consensus        81 ~vi~~ag   87 (259)
                      .+|.+..
T Consensus        65 ~vi~~~~   71 (129)
T d2fy8a1          65 AVIVNLE   71 (129)
T ss_dssp             EEEECCS
T ss_pred             EEEEecc
Confidence            7776553

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=95.82  E-value=0.017  Score=38.84  Aligned_cols=34  Identities=21%  Similarity=0.133  Sum_probs=30.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChh
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI   35 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~   35 (259)
                      |+++|.|| |.+|.++|..|.+.|.+|.++.|.+.
T Consensus        22 ~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   55 (116)
T d1gesa2          22 ERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFDA   55 (116)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CEEEEECC-ChhhHHHHHHhhccccEEEEEeecch
Confidence            57888888 99999999999999999999998653

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.80  E-value=0.022  Score=43.52  Aligned_cols=72  Identities=17%  Similarity=0.080  Sum_probs=56.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|=.|++.|   .++..|+++|++|++++.+++-++.+.+.+...+.++.+...|+.+..            +++++|
T Consensus        43 ~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l~------------~~~~fD  107 (251)
T d1wzna1          43 RRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIA------------FKNEFD  107 (251)
T ss_dssp             CEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCC------------CCSCEE
T ss_pred             CEEEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccccccccchheehhhhhcc------------cccccc
Confidence            46888898876   456779999999999999998888777777766778899999986632            124689


Q ss_pred             EEEEcCC
Q 024994           81 ILINNAA   87 (259)
Q Consensus        81 ~vi~~ag   87 (259)
                      +|+..-+
T Consensus       108 ~I~~~~~  114 (251)
T d1wzna1         108 AVTMFFS  114 (251)
T ss_dssp             EEEECSS
T ss_pred             hHhhhhh
Confidence            8887644

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=95.78  E-value=0.004  Score=40.42  Aligned_cols=34  Identities=12%  Similarity=0.073  Sum_probs=30.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChh
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI   35 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~   35 (259)
                      |+++|.|. |..|.++|+.|.++|++|++.+.+..
T Consensus         6 K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           6 KNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             CEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            67999998 77899999999999999999998654

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=95.73  E-value=0.016  Score=39.40  Aligned_cols=34  Identities=29%  Similarity=0.337  Sum_probs=30.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChh
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI   35 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~   35 (259)
                      |+++|.|| |.+|.++|..|.+.|.+|.++.|.+.
T Consensus        33 ~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   66 (122)
T d1xhca2          33 GEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGAM   66 (122)
T ss_dssp             SEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred             CcEEEECC-cHHHHHHHHHhhcccceEEEEecccc
Confidence            57888888 99999999999999999999988653

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=95.72  E-value=0.011  Score=42.02  Aligned_cols=43  Identities=9%  Similarity=0.013  Sum_probs=37.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEW   44 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~   44 (259)
                      |++.|.|+ |-+|.++++.|.+.|+++++.+|+.++.+++.++.
T Consensus         1 MkIg~IG~-G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~   43 (152)
T d2ahra2           1 MKIGIIGV-GKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL   43 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH
T ss_pred             CEEEEEec-cHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc
Confidence            46777766 99999999999999999999999999888776554

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=95.70  E-value=0.048  Score=41.72  Aligned_cols=32  Identities=25%  Similarity=0.298  Sum_probs=28.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRN   33 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~   33 (259)
                      ++|+|.|+ ||+|.+++..|+..|. +++++|.+
T Consensus        31 ~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D   63 (247)
T d1jw9b_          31 SRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFD   63 (247)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred             CCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCc
Confidence            57999997 8999999999999997 78888754

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=95.66  E-value=0.039  Score=40.15  Aligned_cols=81  Identities=25%  Similarity=0.184  Sum_probs=52.4

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHH---------------HHHH
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE---------------QREK   66 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---------------~~~~   66 (259)
                      ++||.|+ |-.|.+.++-...-|++|.+.|.+.+.++++...    +.++  +..+..+.+               ..++
T Consensus        31 ~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l----~~~~--i~~~~~~~~~~~~~~gyA~~~s~~~~~~  103 (183)
T d1l7da1          31 RVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESL----GGKF--ITVDDEAMKTAETAGGYAKEMGEEFRKK  103 (183)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHT----TCEE--CCC-----------------------CC
T ss_pred             EEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHh----hcce--EEEeccccccccccccchhhcCHHHHHH
Confidence            5889998 8999999999999999999999999888765432    2222  222211111               1112


Q ss_pred             HHHHHHHHcCCCccEEEEcCCCCC
Q 024994           67 LIETVTSIFQGKLNILINNAAIAF   90 (259)
Q Consensus        67 ~~~~~~~~~~~~id~vi~~ag~~~   90 (259)
                      .-+.+.+.. ..-|+||..+-+..
T Consensus       104 ~~~~l~~~l-~~aDlVI~talipG  126 (183)
T d1l7da1         104 QAEAVLKEL-VKTDIAITTALIPG  126 (183)
T ss_dssp             HHHHHHHHH-TTCSEEEECCCCTT
T ss_pred             HHHHHHHHH-HhhhhheeeeecCC
Confidence            223334444 57999999998764

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=95.62  E-value=0.029  Score=37.86  Aligned_cols=33  Identities=27%  Similarity=0.140  Sum_probs=30.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCCh
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ   34 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~   34 (259)
                      |+++|.|| |.||.++|..|++.|.+|.++.+..
T Consensus        23 ~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          23 GKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CeEEEECC-ChHHHHHHHHHHHcCCceEEEEeec
Confidence            57899998 9999999999999999999998765

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=95.56  E-value=0.008  Score=44.47  Aligned_cols=40  Identities=23%  Similarity=0.145  Sum_probs=35.0

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHH
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLH   42 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~   42 (259)
                      ++.|.|+ |..|.++|..|++.|++|.+.+|+++..+.+..
T Consensus         9 KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~   48 (189)
T d1n1ea2           9 KAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVNE   48 (189)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHH
T ss_pred             eEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhh
Confidence            5889998 789999999999999999999999887766543

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.52  E-value=0.034  Score=37.14  Aligned_cols=68  Identities=15%  Similarity=0.221  Sum_probs=52.1

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCccE
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNI   81 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~   81 (259)
                      ++.|.|| |-+|+-++....+-|+++++++.+.+.-...        ..-.++..|..|.+.+.++..+.      .+|+
T Consensus        13 kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~PA~~--------va~~~i~~~~~d~~~l~~~~~~~------~~Dv   77 (111)
T d1kjqa2          13 RVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAMH--------VAHRSHVINMLDGDALRRVVELE------KPHY   77 (111)
T ss_dssp             EEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGGG--------GSSEEEECCTTCHHHHHHHHHHH------CCSE
T ss_pred             EEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCchhh--------cCCeEEECCCCCHHHHHHHHHhh------CCce
Confidence            6889996 8999999999999999999999876532211        12356778999999988887653      5787


Q ss_pred             EEE
Q 024994           82 LIN   84 (259)
Q Consensus        82 vi~   84 (259)
                      +-.
T Consensus        78 iT~   80 (111)
T d1kjqa2          78 IVP   80 (111)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            753

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.52  E-value=0.011  Score=44.00  Aligned_cols=39  Identities=18%  Similarity=0.111  Sum_probs=33.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDAR   40 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~   40 (259)
                      |++.|.|. |.+|..+|..|+++|++|++.|.+++..+.+
T Consensus         1 MkI~ViGl-G~vGl~~a~~la~~g~~V~g~D~n~~~i~~l   39 (202)
T d1mv8a2           1 MRISIFGL-GYVGAVCAGCLSARGHEVIGVDVSSTKIDLI   39 (202)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CEEEEECC-CHhHHHHHHHHHhCCCcEEEEeCCHHHHHHh
Confidence            56778855 9999999999999999999999998776554

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=95.50  E-value=0.015  Score=44.55  Aligned_cols=72  Identities=15%  Similarity=0.101  Sum_probs=57.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++|=.|++.|.   ++..|+++|.+|+.++.+++.++.+.+.....+.++.++..|+.+.+            ..+++|
T Consensus        39 ~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~~~------------~~~~fD  103 (246)
T d1y8ca_          39 DDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLN------------INRKFD  103 (246)
T ss_dssp             TEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCC------------CSCCEE
T ss_pred             CeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhccccccccCccceeeccchhhhc------------cccccc
Confidence            468888998885   78899999999999999999888777767666778899988886532            125799


Q ss_pred             EEEEcCC
Q 024994           81 ILINNAA   87 (259)
Q Consensus        81 ~vi~~ag   87 (259)
                      +|+...+
T Consensus       104 ~i~~~~~  110 (246)
T d1y8ca_         104 LITCCLD  110 (246)
T ss_dssp             EEEECTT
T ss_pred             ccceeee
Confidence            9987644

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.41  E-value=0.0066  Score=44.52  Aligned_cols=34  Identities=21%  Similarity=0.179  Sum_probs=30.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChh
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI   35 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~   35 (259)
                      |++.|.|+ |..|.++|..|++.|++|.+.+|..+
T Consensus         1 MkI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~   34 (180)
T d1txga2           1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFD   34 (180)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGG
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEEeccc
Confidence            67889998 99999999999999999999998654

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.39  E-value=0.022  Score=38.70  Aligned_cols=32  Identities=25%  Similarity=0.199  Sum_probs=28.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRN   33 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~   33 (259)
                      |+++|.|| |.||.++|..|.+.|.+|.++.|+
T Consensus        21 ~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          21 GKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            45788888 999999999999999999999875

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=95.37  E-value=0.013  Score=39.94  Aligned_cols=34  Identities=24%  Similarity=0.219  Sum_probs=29.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChh
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI   35 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~   35 (259)
                      |+++|.|| |.+|.++|..|++.|.+|.++.+.+.
T Consensus        31 k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~~   64 (123)
T d1nhpa2          31 NNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILDR   64 (123)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CEEEEECC-hHHHHHHHHHhhccceEEEEEEecCc
Confidence            57888877 89999999999999999999987653

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.35  E-value=0.029  Score=39.49  Aligned_cols=32  Identities=22%  Similarity=0.331  Sum_probs=29.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRN   33 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~   33 (259)
                      |++||+|| |.+|..-++.|++.|++|++++..
T Consensus        14 krvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1          14 KRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             CEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            78999999 679999999999999999999753

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=95.34  E-value=0.026  Score=38.36  Aligned_cols=34  Identities=21%  Similarity=0.150  Sum_probs=30.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChh
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI   35 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~   35 (259)
                      |+++|.|| |-||.++|..|.+.|.+|.++.|.+.
T Consensus        26 ~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~   59 (123)
T d1dxla2          26 KKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASE   59 (123)
T ss_dssp             SEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEccc
Confidence            57889988 99999999999999999999988654

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=95.32  E-value=0.038  Score=40.11  Aligned_cols=75  Identities=15%  Similarity=0.106  Sum_probs=53.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhc-------------CCcEEEEEecCCCHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-------------GFKVTGSVCDLSSREQREKL   67 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~~~~~   67 (259)
                      ++||..|++.|   ..+..|+++|++|+.++.++..++.+.+.....             +....++..|..+...... 
T Consensus        22 ~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~-   97 (201)
T d1pjza_          22 ARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDI-   97 (201)
T ss_dssp             CEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHH-
T ss_pred             CEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccccccccccc-
Confidence            47899999877   477799999999999999999998876665432             2345677888876433111 


Q ss_pred             HHHHHHHcCCCccEEEEcCCC
Q 024994           68 IETVTSIFQGKLNILINNAAI   88 (259)
Q Consensus        68 ~~~~~~~~~~~id~vi~~ag~   88 (259)
                               ...|.++.....
T Consensus        98 ---------~~~D~i~~~~~l  109 (201)
T d1pjza_          98 ---------GHCAAFYDRAAM  109 (201)
T ss_dssp             ---------HSEEEEEEESCG
T ss_pred             ---------cceeEEEEEeee
Confidence                     367877765443

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.24  E-value=0.034  Score=37.20  Aligned_cols=33  Identities=24%  Similarity=0.287  Sum_probs=29.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCCh
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ   34 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~   34 (259)
                      |+++|.|| |.+|.++|..|.+.|.+|.++.+.+
T Consensus        22 ~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          22 QHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHhhcccceEEEeeec
Confidence            57888887 9999999999999999999998764

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=95.24  E-value=0.13  Score=35.54  Aligned_cols=84  Identities=8%  Similarity=-0.041  Sum_probs=52.6

Q ss_pred             CEEEEEcCc---chHHHHHHHHHHHCCCEEEEeeCChhHHH--HHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Q 024994            1 MTALVTGGT---RGIGHATVEELARFGAIVHTCSRNQIELD--ARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIF   75 (259)
Q Consensus         1 k~~lItG~s---~giG~~~a~~l~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (259)
                      |++.|.|+|   +..|..+++.|.+.|++|+.+..+.....  .....+.+....+..+.. ....+.+..+++++.+. 
T Consensus        20 ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dlp~~iD~v~i-~vp~~~~~~~~~e~~~~-   97 (139)
T d2d59a1          20 KKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDL-FVKPKLTMEYVEQAIKK-   97 (139)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSSCCSEEEE-CSCHHHHHHHHHHHHHH-
T ss_pred             CeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCcccccccccCccceEEEE-EeCHHHHHHHHHHHHHh-
Confidence            689999999   57999999999999999999876543221  111112222222222211 13456777777777663 


Q ss_pred             CCCccEEEEcCCC
Q 024994           76 QGKLNILINNAAI   88 (259)
Q Consensus        76 ~~~id~vi~~ag~   88 (259)
                        ++..++...|.
T Consensus        98 --g~k~v~~~~G~  108 (139)
T d2d59a1          98 --GAKVVWFQYNT  108 (139)
T ss_dssp             --TCSEEEECTTC
T ss_pred             --CCCEEEEeccc
Confidence              35677776664

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=95.17  E-value=0.013  Score=44.68  Aligned_cols=33  Identities=33%  Similarity=0.356  Sum_probs=30.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCCh
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ   34 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~   34 (259)
                      |+|+|.|| |-.|..+|..|+++|++|.++.|+.
T Consensus         7 ~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           7 KRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            67999998 9999999999999999999999864

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=95.04  E-value=0.029  Score=36.40  Aligned_cols=69  Identities=16%  Similarity=0.153  Sum_probs=44.9

Q ss_pred             CEEEEEcCcchHH-HHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIG-HATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG-~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++-+.|- +|+| .++|+.|.++|+.|...|+......+.   +.+.+..+.  ..+-.+             .. .+.
T Consensus         9 ~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~---L~~~Gi~v~--~g~~~~-------------~i-~~~   68 (96)
T d1p3da1           9 QQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVTQR---LAQAGAKIY--IGHAEE-------------HI-EGA   68 (96)
T ss_dssp             CEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHHHH---HHHTTCEEE--ESCCGG-------------GG-TTC
T ss_pred             CEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhhhH---HHHCCCeEE--ECCccc-------------cC-CCC
Confidence            46677776 6666 667999999999999999986544332   333343332  222211             11 368


Q ss_pred             cEEEEcCCCC
Q 024994           80 NILINNAAIA   89 (259)
Q Consensus        80 d~vi~~ag~~   89 (259)
                      |.||...++.
T Consensus        69 d~vV~S~AI~   78 (96)
T d1p3da1          69 SVVVVSSAIK   78 (96)
T ss_dssp             SEEEECTTSC
T ss_pred             CEEEECCCcC
Confidence            9999999874

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=94.89  E-value=0.033  Score=41.39  Aligned_cols=39  Identities=21%  Similarity=0.261  Sum_probs=34.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDAR   40 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~   40 (259)
                      |+++|-| .|.+|.++|+.|.+.|++|++.+.+.+.+...
T Consensus        28 k~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~   66 (201)
T d1c1da1          28 LTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHA   66 (201)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHH
Confidence            6889988 48899999999999999999999998877654

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=94.78  E-value=0.033  Score=41.06  Aligned_cols=77  Identities=14%  Similarity=0.123  Sum_probs=59.4

Q ss_pred             EEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCccEEEE
Q 024994            5 VTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILIN   84 (259)
Q Consensus         5 ItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~vi~   84 (259)
                      +|-|+||...++.+.+ . +.+|+++|++++.++...+.+...+.++.++..++++...+   ++...  . .++|.++.
T Consensus        30 ~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~~~~~---~~~~~--~-~~vdgIl~  101 (192)
T d1m6ya2          30 CTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFL---LKTLG--I-EKVDGILM  101 (192)
T ss_dssp             TTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHH---HHHTT--C-SCEEEEEE
T ss_pred             ecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccccccccchhHHHhhHHHH---HHHcC--C-CCcceeee
Confidence            4778888888888876 3 46899999999999888888877778899999999875442   22211  1 57999999


Q ss_pred             cCCCC
Q 024994           85 NAAIA   89 (259)
Q Consensus        85 ~ag~~   89 (259)
                      .-|++
T Consensus       102 DlGvS  106 (192)
T d1m6ya2         102 DLGVS  106 (192)
T ss_dssp             ECSCC
T ss_pred             ccchh
Confidence            99975

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=94.62  E-value=0.036  Score=38.02  Aligned_cols=74  Identities=18%  Similarity=0.215  Sum_probs=54.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEe-eCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTC-SRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      +++.|.|++|-.|+.+++.+.++|+.++.. +++....      + + ...   +..|+|.++...+.++.+.+.   +.
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~~------~-~-~~D---VvIDFS~p~~~~~~l~~~~~~---~~   66 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVEE------L-D-SPD---VVIDFSSPEALPKTVDLCKKY---RA   66 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEEE------C-S-CCS---EEEECSCGGGHHHHHHHHHHH---TC
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHHH------h-c-cCC---EEEEecCHHHHHHHHHHHHhc---CC
Confidence            579999999999999999999999986643 4433211      0 0 112   357999999999999988774   46


Q ss_pred             cEEEEcCCC
Q 024994           80 NILINNAAI   88 (259)
Q Consensus        80 d~vi~~ag~   88 (259)
                      -+|+-..|.
T Consensus        67 p~ViGTTG~   75 (128)
T d1vm6a3          67 GLVLGTTAL   75 (128)
T ss_dssp             EEEECCCSC
T ss_pred             CEEEEcCCC
Confidence            677777774

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.62  E-value=0.15  Score=35.08  Aligned_cols=76  Identities=12%  Similarity=0.154  Sum_probs=52.8

Q ss_pred             EEEEEcCcchHHHHHHHHHHHC-CCEEE-EeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            2 TALVTGGTRGIGHATVEELARF-GAIVH-TCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~-G~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      ++.|.|++|-.|+.+++...+. ++.++ .+++.+. +..    +...+..   +..|+|.++.....++.+.+   .++
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~-~~~----~~~~~~D---vvIDFS~p~~~~~~~~~~~~---~~~   69 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDP-LSL----LTDGNTE---VVIDFTHPDVVMGNLEFLID---NGI   69 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCC-THH----HHTTTCS---EEEECCCTTTHHHHHHHHHH---TTC
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCc-hhh----hccccCC---EEEEcccHHHHHHHHHHHHh---cCC
Confidence            5889999999999999988775 56654 4454332 221    1122223   35899999999999988876   357


Q ss_pred             cEEEEcCCC
Q 024994           80 NILINNAAI   88 (259)
Q Consensus        80 d~vi~~ag~   88 (259)
                      -+|+-..|.
T Consensus        70 ~~ViGTTG~   78 (135)
T d1yl7a1          70 HAVVGTTGF   78 (135)
T ss_dssp             EEEECCCCC
T ss_pred             CEEEecccc
Confidence            778877774

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=94.51  E-value=0.2  Score=35.45  Aligned_cols=75  Identities=12%  Similarity=-0.044  Sum_probs=42.3

Q ss_pred             CEEEEEcCcchHHHHHHHH-HHH-C----CCEEEEeeCChhHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEE-LAR-F----GAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSSREQREKLIETVTS   73 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~-l~~-~----G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   73 (259)
                      +++.|.||++ +|...+.. +++ .    +..+++.|.++++++...+..+.. ...... ... ++.++   .+     
T Consensus         1 mKIaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~-~~t-~~~~~---~l-----   69 (162)
T d1up7a1           1 MRIAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKV-LIS-DTFEG---AV-----   69 (162)
T ss_dssp             CEEEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEE-EEC-SSHHH---HH-----
T ss_pred             CEEEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceE-EEe-cCccc---cc-----
Confidence            5788999854 56555533 222 1    358999999999876543322211 112221 121 23221   22     


Q ss_pred             HcCCCccEEEEcCCCC
Q 024994           74 IFQGKLNILINNAAIA   89 (259)
Q Consensus        74 ~~~~~id~vi~~ag~~   89 (259)
                         ..-|+||..+|..
T Consensus        70 ---~~aDvVVita~~~   82 (162)
T d1up7a1          70 ---VDAKYVIFQFRPG   82 (162)
T ss_dssp             ---TTCSEEEECCCTT
T ss_pred             ---CCCCEEEEecccC
Confidence               4689999999964

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.50  E-value=0.091  Score=39.48  Aligned_cols=41  Identities=10%  Similarity=0.082  Sum_probs=34.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEW   44 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~   44 (259)
                      ++||..|++.|   ..+..|+++|++|+.++-++..++.+.++.
T Consensus        47 ~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~   87 (229)
T d2bzga1          47 LRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQ   87 (229)
T ss_dssp             CEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHT
T ss_pred             CEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHh
Confidence            47899999876   468889999999999999999887766553

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=94.43  E-value=0.024  Score=41.37  Aligned_cols=33  Identities=21%  Similarity=0.109  Sum_probs=30.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCCh
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ   34 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~   34 (259)
                      |+|+|.|| |--|.+.|..|+++|++|++..++.
T Consensus        44 k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          44 KNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             cEEEEECc-cHHHHHHHHHHHhhccceEEEeccC
Confidence            68999998 8999999999999999999999865

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=94.42  E-value=0.033  Score=39.95  Aligned_cols=40  Identities=23%  Similarity=0.277  Sum_probs=35.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDAR   40 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~   40 (259)
                      |+++|.|-|.=+|+.++..|.++|++|+.+......+.+.
T Consensus        38 K~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~~~   77 (166)
T d1b0aa1          38 LNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHH   77 (166)
T ss_dssp             CEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHH
T ss_pred             ceEEEEeccccccHHHHHHHHHhhccccccccccchhHHH
Confidence            7899999999999999999999999999998777655443

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=94.37  E-value=0.022  Score=44.12  Aligned_cols=33  Identities=21%  Similarity=0.132  Sum_probs=29.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCCh
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ   34 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~   34 (259)
                      |+|+|.|| |--|...|.+|+++|++|+++.++.
T Consensus         2 KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           2 KRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            88999998 8899999999999999999998653

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.37  E-value=0.025  Score=47.17  Aligned_cols=32  Identities=28%  Similarity=0.451  Sum_probs=28.2

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCCh
Q 024994            2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQ   34 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~   34 (259)
                      +|||.|+ ||||.++++.|+..|. ++.++|.+.
T Consensus        39 kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~   71 (426)
T d1yovb1          39 KVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDT   71 (426)
T ss_dssp             CEEEECS-STTHHHHHHHHHTTTCCCEEEECCCB
T ss_pred             eEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCC
Confidence            6899999 8899999999999998 788888654

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=94.36  E-value=0.033  Score=38.40  Aligned_cols=34  Identities=18%  Similarity=0.115  Sum_probs=30.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChh
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI   35 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~   35 (259)
                      |+++|.|| |.+|.++|..|.+.|.+|.++.+.+.
T Consensus        36 k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~   69 (133)
T d1q1ra2          36 NRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAAR   69 (133)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CEEEEECC-chHHHHHHHHHHhhCcceeeeeeccc
Confidence            57889988 99999999999999999999988654

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.30  E-value=0.052  Score=42.74  Aligned_cols=26  Identities=19%  Similarity=0.095  Sum_probs=22.5

Q ss_pred             CcchHHHHHHHHHHHCCCEEEEeeCC
Q 024994            8 GTRGIGHATVEELARFGAIVHTCSRN   33 (259)
Q Consensus         8 ~s~giG~~~a~~l~~~G~~V~~~~r~   33 (259)
                      .||-.|.++|+.|..+|+.|+++.+.
T Consensus        44 SSGk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          44 SSGRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CchHHHHHHHHHHHHcCCEEEEEecC
Confidence            35789999999999999999988643

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.23  E-value=0.023  Score=41.46  Aligned_cols=33  Identities=15%  Similarity=0.176  Sum_probs=29.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCCh
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQ   34 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~   34 (259)
                      |+|+|.|| |-.|...|..|+++|+ .|+++.|+.
T Consensus         5 ~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~   38 (196)
T d1gtea4           5 AKIALLGA-GPASISCASFLARLGYSDITIFEKQE   38 (196)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred             CEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecC
Confidence            68999998 9999999999999998 598888765

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=94.11  E-value=0.3  Score=32.49  Aligned_cols=83  Identities=12%  Similarity=0.086  Sum_probs=49.9

Q ss_pred             CEEEEEcCc---chHHHHHHHHHHHCCCEEEEeeCChhHHH--HHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Q 024994            1 MTALVTGGT---RGIGHATVEELARFGAIVHTCSRNQIELD--ARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIF   75 (259)
Q Consensus         1 k~~lItG~s---~giG~~~a~~l~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (259)
                      |++.|.|+|   +-.|..+.+.|.+.|++|+.+..+.+...  .....+.+....+..+.. ....+.+..+++++.+  
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~~lp~~~D~vvi-~vp~~~~~~~l~~~~~--   78 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVRELPKDVDVIVF-VVPPKVGLQVAKEAVE--   78 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGSCTTCCEEEE-CSCHHHHHHHHHHHHH--
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccccccCccccccchhccccceEEEE-EeCHHHHHHHHHHHHh--
Confidence            789999998   45899999999999999998875543211  111112222223332221 2345666667776655  


Q ss_pred             CCCccEEEEcCC
Q 024994           76 QGKLNILINNAA   87 (259)
Q Consensus        76 ~~~id~vi~~ag   87 (259)
                       ..+..++...|
T Consensus        79 -~g~k~v~~~~g   89 (116)
T d1y81a1          79 -AGFKKLWFQPG   89 (116)
T ss_dssp             -TTCCEEEECTT
T ss_pred             -cCCceEEeccc
Confidence             24556665554

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=93.95  E-value=0.044  Score=36.84  Aligned_cols=34  Identities=18%  Similarity=0.059  Sum_probs=30.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChh
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI   35 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~   35 (259)
                      |+++|.|| |.+|.++|..|.+.|..|.++.|.+.
T Consensus        23 ~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          23 STVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcchhheEeeccch
Confidence            56788887 99999999999999999999988653

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=93.88  E-value=0.07  Score=41.11  Aligned_cols=70  Identities=17%  Similarity=0.228  Sum_probs=51.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      +++|=.|+++|+   ++..+++.|++|+.++.++...+.+.+..+..+....++..|+.+      ...     . ++.|
T Consensus       122 ~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~d~~~------~~~-----~-~~fD  186 (254)
T d2nxca1         122 DKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEA------ALP-----F-GPFD  186 (254)
T ss_dssp             CEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHH------HGG-----G-CCEE
T ss_pred             CEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHcCCceeEEeccccc------ccc-----c-cccc
Confidence            467778988886   344677889999999999999988877777666677777776521      111     1 5799


Q ss_pred             EEEEc
Q 024994           81 ILINN   85 (259)
Q Consensus        81 ~vi~~   85 (259)
                      +|+.|
T Consensus       187 ~V~an  191 (254)
T d2nxca1         187 LLVAN  191 (254)
T ss_dssp             EEEEE
T ss_pred             hhhhc
Confidence            99876

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=93.87  E-value=0.034  Score=37.93  Aligned_cols=33  Identities=18%  Similarity=0.204  Sum_probs=29.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCCh
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ   34 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~   34 (259)
                      |.++|.|| |.||.++|..|.+.|.+|.++.+.+
T Consensus        27 ~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          27 GKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             SEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence            57889998 9999999999999999999998754

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=93.86  E-value=0.028  Score=43.32  Aligned_cols=31  Identities=29%  Similarity=0.233  Sum_probs=28.8

Q ss_pred             EEEEcCcchHHHHHHHHHHHCCCEEEEeeCCh
Q 024994            3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQ   34 (259)
Q Consensus         3 ~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~   34 (259)
                      |+|.|| |-.|.++|.+|+++|.+|++++++.
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            788888 9999999999999999999999865

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=93.85  E-value=0.064  Score=37.64  Aligned_cols=39  Identities=13%  Similarity=0.050  Sum_probs=32.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDAR   40 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~   40 (259)
                      |++-|.|. |-+|.++++.|.++|+.|+..+++.++....
T Consensus         1 MkIgiIG~-G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~   39 (152)
T d1i36a2           1 LRVGFIGF-GEVAQTLASRLRSRGVEVVTSLEGRSPSTIE   39 (152)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCEEEECCTTCCHHHHH
T ss_pred             CEEEEEcH-HHHHHHHHHHHHHCCCeEEEEcCchhHHHHH
Confidence            46777766 9999999999999999999999877665443

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=93.81  E-value=0.036  Score=42.27  Aligned_cols=34  Identities=24%  Similarity=0.167  Sum_probs=30.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChh
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI   35 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~   35 (259)
                      ++|+|.|| |--|..+|..|+++|++|+++.|+.+
T Consensus         5 ~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1           5 DRIAVVGG-SISGLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            57999998 89999999999999999999998653

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.80  E-value=0.085  Score=37.59  Aligned_cols=36  Identities=28%  Similarity=0.374  Sum_probs=32.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIEL   37 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~   37 (259)
                      |+++|.|= |-||+.+|+.|...|++|++++.++.+.
T Consensus        25 k~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp~~a   60 (163)
T d1li4a1          25 KVAVVAGY-GDVGKGCAQALRGFGARVIITEIDPINA   60 (163)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             CEEEEecc-ccccHHHHHHHHhCCCeeEeeecccchh
Confidence            78888886 7899999999999999999999987553

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.65  E-value=0.042  Score=39.59  Aligned_cols=39  Identities=28%  Similarity=0.373  Sum_probs=34.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDA   39 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~   39 (259)
                      |+++|.|-|.=+|+.++..|.++|++|..+......+.+
T Consensus        40 k~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~~   78 (170)
T d1a4ia1          40 RHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDE   78 (170)
T ss_dssp             CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHH
T ss_pred             ceEEEEecCCccchHHHHHHHhccCceEEEecccccHHH
Confidence            789999999999999999999999999999987766544

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.34  E-value=0.14  Score=35.89  Aligned_cols=35  Identities=20%  Similarity=0.180  Sum_probs=28.8

Q ss_pred             EEEEE-cCcchHHHHHHHHHHHCCCEEEEeeCChhH
Q 024994            2 TALVT-GGTRGIGHATVEELARFGAIVHTCSRNQIE   36 (259)
Q Consensus         2 ~~lIt-G~s~giG~~~a~~l~~~G~~V~~~~r~~~~   36 (259)
                      .++|. .+++.||.++|..|+++|.+|.++.+...-
T Consensus        41 ~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~~   76 (156)
T d1djqa2          41 RVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHLA   76 (156)
T ss_dssp             EEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCTT
T ss_pred             ceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcc
Confidence            44554 466999999999999999999999887643

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.31  E-value=0.18  Score=37.18  Aligned_cols=73  Identities=15%  Similarity=-0.037  Sum_probs=55.9

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCccE
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNI   81 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~   81 (259)
                      +||=.|+++|.   ++..|++.|++|++++.+.+.++.+.+.+.+.+..+.++..|..+...           ....+|+
T Consensus        40 ~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~l~~-----------~~~~fD~  105 (226)
T d1ve3a1          40 KVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSF-----------EDKTFDY  105 (226)
T ss_dssp             EEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCS-----------CTTCEEE
T ss_pred             EEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhccccccccccccccccccc-----------cCcCceE
Confidence            57888998876   667899999999999999998887777766666677888888775310           0146999


Q ss_pred             EEEcCCC
Q 024994           82 LINNAAI   88 (259)
Q Consensus        82 vi~~ag~   88 (259)
                      |+.....
T Consensus       106 I~~~~~l  112 (226)
T d1ve3a1         106 VIFIDSI  112 (226)
T ss_dssp             EEEESCG
T ss_pred             EEEecch
Confidence            9887654

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=93.28  E-value=0.041  Score=43.17  Aligned_cols=33  Identities=18%  Similarity=0.182  Sum_probs=30.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCCh
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ   34 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~   34 (259)
                      |+|+|.|| |--|...|..|+++|++|+++.+++
T Consensus        31 kkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          31 KHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             CEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            68999998 7889999999999999999998765

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=92.94  E-value=0.063  Score=40.48  Aligned_cols=33  Identities=21%  Similarity=0.284  Sum_probs=30.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCCh
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ   34 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~   34 (259)
                      |+++|.|| |..|...|..|+++|++|.++.++.
T Consensus        50 k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          50 DSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             ceEEEEcc-cHHHHHHHHHHHHhccceeeEeecc
Confidence            68999999 8889999999999999999998755

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=92.79  E-value=0.15  Score=38.51  Aligned_cols=42  Identities=21%  Similarity=0.253  Sum_probs=36.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE   43 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~   43 (259)
                      |+++|-|- |.+|..+|+.|.+.|++|+.++.+...+.....+
T Consensus        40 ~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~   81 (230)
T d1leha1          40 LAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAE   81 (230)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHh
Confidence            57788776 9999999999999999999999998887766554

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=92.70  E-value=0.4  Score=35.12  Aligned_cols=70  Identities=19%  Similarity=0.202  Sum_probs=51.3

Q ss_pred             CEEEEEcCcch-HHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            1 MTALVTGGTRG-IGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         1 k~~lItG~s~g-iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      |++|=.|+++| ++    ..++.+|+ .|++++.++..++.+.+.++..+.+..++..|+.+              +.++
T Consensus        48 ~~vLDlg~GtG~l~----i~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~~~~~~~~~~d~~~--------------~~~~  109 (201)
T d1wy7a1          48 KVVADLGAGTGVLS----YGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSE--------------FNSR  109 (201)
T ss_dssp             CEEEEETCTTCHHH----HHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGG--------------CCCC
T ss_pred             CEEEECcCcchHHH----HHHHHcCCCEEEEEcCcHHHHHHHHHHHHHcCCCceEEECchhh--------------hCCc
Confidence            35555666555 44    34456785 89999999999888877777777788888888743              2368


Q ss_pred             ccEEEEcCCC
Q 024994           79 LNILINNAAI   88 (259)
Q Consensus        79 id~vi~~ag~   88 (259)
                      +|+||.|.-+
T Consensus       110 fD~Vi~nPP~  119 (201)
T d1wy7a1         110 VDIVIMNPPF  119 (201)
T ss_dssp             CSEEEECCCC
T ss_pred             CcEEEEcCcc
Confidence            9999998865

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=92.43  E-value=0.062  Score=41.47  Aligned_cols=31  Identities=23%  Similarity=0.269  Sum_probs=27.9

Q ss_pred             EEEEcCcchHHHHHHHHHHHCCCEEEEeeCCh
Q 024994            3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQ   34 (259)
Q Consensus         3 ~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~   34 (259)
                      |+|.|| |-.|..+|.+|+++|++|+++.+..
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            678887 8999999999999999999998754

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=92.25  E-value=0.34  Score=36.00  Aligned_cols=75  Identities=19%  Similarity=0.110  Sum_probs=57.4

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG-FKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      +||..|+++|--.++.-+++  |.+|+.+.++++-.+...+.+.+.+ .++.++..|..+--          ... ++.|
T Consensus        81 ~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g~----------~~~-~pfD  147 (215)
T d1jg1a_          81 NILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGF----------PPK-APYD  147 (215)
T ss_dssp             CEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC----------GGG-CCEE
T ss_pred             eEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccCC----------ccc-Ccce
Confidence            68899999998888888887  4679999999887777777776654 57999999986410          011 5899


Q ss_pred             EEEEcCCCC
Q 024994           81 ILINNAAIA   89 (259)
Q Consensus        81 ~vi~~ag~~   89 (259)
                      .++.+++..
T Consensus       148 ~Iiv~~a~~  156 (215)
T d1jg1a_         148 VIIVTAGAP  156 (215)
T ss_dssp             EEEECSBBS
T ss_pred             eEEeecccc
Confidence            999988864

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=92.23  E-value=0.081  Score=41.96  Aligned_cols=33  Identities=24%  Similarity=0.269  Sum_probs=29.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCCh
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ   34 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~   34 (259)
                      |+++|.|| |--|..+|..|+++|++|.++.++.
T Consensus         3 KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~   35 (314)
T d2bi7a1           3 KKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRD   35 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCC
Confidence            78999998 8899999999999999999987655

>d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=92.23  E-value=1.4  Score=31.87  Aligned_cols=91  Identities=15%  Similarity=0.095  Sum_probs=50.9

Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCCccCCCCCChhhhhhHHH
Q 024994           77 GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGA  156 (259)
Q Consensus        77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~~~~~~~~~~~Y~~sK~a  156 (259)
                      +.++.||+..+........ .+.      ....+...+.++|.+.   ......++.+++......+ +....-...+++
T Consensus        76 ~~~~~vv~l~~~~~~~~~~-~~~------~~~~~~~~l~l~qal~---~~~~~~~l~~vT~~a~~~~-~~d~~~~p~~A~  144 (209)
T d2fr1a2          76 GEVAGVLSLLAVDEAEPEE-APL------ALASLADTLSLVQAMV---SAELGCPLWTVTESAVATG-PFERVRNAAHGA  144 (209)
T ss_dssp             CCCSEEEECTTTTCCCCSS-CGG------GCHHHHHHHHHHHHHH---HTTCCCCEEEEEESCSCSS-TTSCCSCGGGHH
T ss_pred             CCCCeEEEeCCCCCCCCcc-hhH------HHHHHHHHHHHHHHHH---hCCCCCcEEEEEcCCcccC-CCcccCCHhHHh
Confidence            5688999987754322111 111      1123455556666653   2233466777666433222 222333567899


Q ss_pred             HHHHHHHHHHHHccCCceEEEE
Q 024994          157 MNQLTKNLACEWAKDNIRTNTV  178 (259)
Q Consensus       157 ~~~~~~~~a~e~~~~gi~v~~v  178 (259)
                      +.+|.|+++.|+-...++...+
T Consensus       145 l~Gl~r~~~~E~P~l~~~~vDl  166 (209)
T d2fr1a2         145 LWGVGRVIALENPAVWGGLVDV  166 (209)
T ss_dssp             HHHHHHHHHHHCGGGEEEEEEE
T ss_pred             HHHHHHHHHHhCCCceEEEEEC
Confidence            9999999999975434454444

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=92.08  E-value=0.56  Score=32.70  Aligned_cols=44  Identities=18%  Similarity=0.187  Sum_probs=32.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHC--CCEEEEee--CChhHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARF--GAIVHTCS--RNQIELDARLHEW   44 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~--G~~V~~~~--r~~~~~~~~~~~~   44 (259)
                      |++.|.|+||.||.....-+.++  .++|+.+.  +|-+.+.+.+.+.
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f   49 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEF   49 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHH
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHH
Confidence            67999999999999999988887  46776654  5555555554443

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=92.01  E-value=0.29  Score=32.38  Aligned_cols=33  Identities=21%  Similarity=0.211  Sum_probs=26.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHH---CCCEEEEeeCCh
Q 024994            1 MTALVTGGTRGIGHATVEELAR---FGAIVHTCSRNQ   34 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~---~G~~V~~~~r~~   34 (259)
                      |+++|.|| |.+|.++|..|.+   +|.+|.++.|.+
T Consensus        21 ~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          21 RRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             SEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             CeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            57889988 9999999976654   456799988754

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=91.96  E-value=0.092  Score=37.19  Aligned_cols=33  Identities=18%  Similarity=0.157  Sum_probs=28.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC--EEEEeeCCh
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQ   34 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~--~V~~~~r~~   34 (259)
                      |+++|.|| |.+|..+|..|.+.+.  +|+++.+++
T Consensus         3 krivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           3 RKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            78999999 8999999999999885  788887765

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=91.88  E-value=1.4  Score=31.05  Aligned_cols=75  Identities=9%  Similarity=0.109  Sum_probs=42.2

Q ss_pred             EEEEEcCcchHHHHHHHHHHHC-----CCEEEEeeCChhHHHHHHHHHHh----cCCcEEEEEecCCCHHHHHHHHHHHH
Q 024994            2 TALVTGGTRGIGHATVEELARF-----GAIVHTCSRNQIELDARLHEWKN----KGFKVTGSVCDLSSREQREKLIETVT   72 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~-----G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~   72 (259)
                      ++.|.||++.-...+...++.+     +..+++.|.++++++.....+..    .+....+...  +|..+   ++    
T Consensus         5 KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~e---al----   75 (167)
T d1u8xx1           5 SIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT--TDPEE---AF----   75 (167)
T ss_dssp             EEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE--SCHHH---HH----
T ss_pred             eEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec--CChhh---cc----
Confidence            4677788654333344444432     23899999999988744444332    1222222221  12211   22    


Q ss_pred             HHcCCCccEEEEcCCCC
Q 024994           73 SIFQGKLNILINNAAIA   89 (259)
Q Consensus        73 ~~~~~~id~vi~~ag~~   89 (259)
                          ..-|+||+.+|..
T Consensus        76 ----~~AD~Vvitag~~   88 (167)
T d1u8xx1          76 ----TDVDFVMAHIRVG   88 (167)
T ss_dssp             ----SSCSEEEECCCTT
T ss_pred             ----CCCCEEEECCCcC
Confidence                4789999999974

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=91.86  E-value=0.08  Score=41.32  Aligned_cols=32  Identities=16%  Similarity=0.247  Sum_probs=28.0

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCCh
Q 024994            2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQ   34 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~   34 (259)
                      .|+|.|| |-+|.++|.+|+++|+ +|++++|+.
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            3788888 8999999999999997 699998864

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=91.76  E-value=0.51  Score=32.86  Aligned_cols=83  Identities=11%  Similarity=0.036  Sum_probs=54.7

Q ss_pred             EEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhc------CCcEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024994            3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK------GFKVTGSVCDLSSREQREKLIETVTSIFQ   76 (259)
Q Consensus         3 ~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (259)
                      +-+.|- |-.|.++|++|.+.|+.+ ...|+.++.++..++....      -.....+...+.+.+.+......+.... 
T Consensus         3 Ig~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~-   79 (156)
T d2cvza2           3 VAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYL-   79 (156)
T ss_dssp             EEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTC-
T ss_pred             EEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhccccccc-
Confidence            556666 899999999999998866 5677777766665554311      1123344556677778877777776654 


Q ss_pred             CCccEEEEcCCC
Q 024994           77 GKLNILINNAAI   88 (259)
Q Consensus        77 ~~id~vi~~ag~   88 (259)
                      .+-.++|.+...
T Consensus        80 ~~~~~iid~sT~   91 (156)
T d2cvza2          80 REGTYWVDATSG   91 (156)
T ss_dssp             CTTEEEEECSCC
T ss_pred             cccccccccccC
Confidence            345566666653

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=91.69  E-value=0.048  Score=40.33  Aligned_cols=31  Identities=16%  Similarity=0.184  Sum_probs=27.4

Q ss_pred             CEEEEEcCcchHHHH-----HHHHHHHCCCEEEEee
Q 024994            1 MTALVTGGTRGIGHA-----TVEELARFGAIVHTCS   31 (259)
Q Consensus         1 k~~lItG~s~giG~~-----~a~~l~~~G~~V~~~~   31 (259)
                      |++.|||.++|+|+.     +|+.|+++|++|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            789999999999985     6778999999999986

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=91.62  E-value=0.37  Score=31.77  Aligned_cols=33  Identities=24%  Similarity=0.202  Sum_probs=27.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHH---CCCEEEEeeCCh
Q 024994            1 MTALVTGGTRGIGHATVEELAR---FGAIVHTCSRNQ   34 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~---~G~~V~~~~r~~   34 (259)
                      |+++|.|| |.+|.++|..|.+   .|.+|.++.|.+
T Consensus        19 ~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~   54 (117)
T d1feca2          19 KRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGD   54 (117)
T ss_dssp             SEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred             CeEEEECC-ChHHHHHHHHhHhhcccccccceecccc
Confidence            57899998 9999999987655   488999998764

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=91.57  E-value=0.61  Score=34.40  Aligned_cols=77  Identities=13%  Similarity=0.095  Sum_probs=55.7

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG-FKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      +||-.|+++|--.++..++......|+.++.+++..+...+.+...+ .++.++..|..+.-     .     .. +++|
T Consensus        78 ~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~~-----~-----~~-~~fD  146 (213)
T d1dl5a1          78 RVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGV-----P-----EF-SPYD  146 (213)
T ss_dssp             EEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC-----G-----GG-CCEE
T ss_pred             eEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHcc-----c-----cc-cchh
Confidence            68889988887777666666667799999999998888777776553 36777777765310     0     01 5799


Q ss_pred             EEEEcCCCC
Q 024994           81 ILINNAAIA   89 (259)
Q Consensus        81 ~vi~~ag~~   89 (259)
                      .++.+++..
T Consensus       147 ~I~~~~~~~  155 (213)
T d1dl5a1         147 VIFVTVGVD  155 (213)
T ss_dssp             EEEECSBBS
T ss_pred             hhhhhccHH
Confidence            999988753

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=91.42  E-value=0.078  Score=40.67  Aligned_cols=33  Identities=24%  Similarity=0.208  Sum_probs=29.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCCh
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ   34 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~   34 (259)
                      ++|+|.|| |--|...|..|+++|++|+++.++.
T Consensus         1 m~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           1 MNVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            56899998 8899999999999999999997753

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.32  E-value=0.1  Score=38.69  Aligned_cols=31  Identities=16%  Similarity=0.037  Sum_probs=27.8

Q ss_pred             EEEEcCcchHHHHHHHHHHHCCCEEEEeeCCh
Q 024994            3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQ   34 (259)
Q Consensus         3 ~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~   34 (259)
                      |+|.|| |--|..+|..|+++|.+|.++.++.
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            578886 8999999999999999999998864

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=91.29  E-value=0.33  Score=30.65  Aligned_cols=69  Identities=19%  Similarity=0.172  Sum_probs=46.6

Q ss_pred             CEEEEEcCcchHHH-HHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGH-ATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~-~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |++-+.|- +|+|- ++|+.|.++|+.|...|+......+   .|++.+.++. ..-|..+              . ...
T Consensus         2 ~~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~---~L~~~Gi~i~-~gh~~~~--------------i-~~~   61 (89)
T d1j6ua1           2 MKIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETERTA---YLRKLGIPIF-VPHSADN--------------W-YDP   61 (89)
T ss_dssp             CEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCHHHH---HHHHTTCCEE-SSCCTTS--------------C-CCC
T ss_pred             cEEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCChhHH---HHHHCCCeEE-eeecccc--------------c-CCC
Confidence            35566655 66775 7899999999999999998754433   3555554442 2233322              1 368


Q ss_pred             cEEEEcCCCC
Q 024994           80 NILINNAAIA   89 (259)
Q Consensus        80 d~vi~~ag~~   89 (259)
                      |.||...++.
T Consensus        62 d~vV~SsAI~   71 (89)
T d1j6ua1          62 DLVIKTPAVR   71 (89)
T ss_dssp             SEEEECTTCC
T ss_pred             CEEEEecCcC
Confidence            9999999975

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=91.05  E-value=0.15  Score=37.15  Aligned_cols=38  Identities=18%  Similarity=0.114  Sum_probs=31.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDAR   40 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~   40 (259)
                      |++.|.| .|.+|..+|..|+ +|++|+..|.+++..+.+
T Consensus         1 MkI~ViG-lG~vGl~~a~~~a-~g~~V~g~Din~~~v~~l   38 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGVLLS-LQNEVTIVDILPSKVDKI   38 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHT-TTSEEEEECSCHHHHHHH
T ss_pred             CEEEEEC-CChhHHHHHHHHH-CCCcEEEEECCHHHHHHH
Confidence            5677886 6999999998664 799999999999876554

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=91.05  E-value=0.19  Score=36.94  Aligned_cols=35  Identities=26%  Similarity=0.227  Sum_probs=31.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE   36 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~   36 (259)
                      |++.|.|- |.||+.+|+.|...|.+|+..++....
T Consensus        44 k~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~~   78 (197)
T d1j4aa1          44 QVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRNP   78 (197)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCH
T ss_pred             CeEEEecc-cccchhHHHhHhhhcccccccCccccc
Confidence            68899988 999999999999999999999976543

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=90.88  E-value=0.14  Score=37.76  Aligned_cols=34  Identities=26%  Similarity=0.329  Sum_probs=30.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChh
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI   35 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~   35 (259)
                      |++.|.|. |.||+.+++.|...|.+|+..++...
T Consensus        46 ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   79 (199)
T d1dxya1          46 QTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPM   79 (199)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             eeeeeeec-ccccccccccccccceeeeccCCccc
Confidence            68888887 89999999999999999999998643

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=90.88  E-value=0.44  Score=34.46  Aligned_cols=33  Identities=15%  Similarity=0.000  Sum_probs=29.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCCh
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ   34 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~   34 (259)
                      |++.|.|- |.||+.+++.+...|.+|+..++..
T Consensus        45 ~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d1sc6a1          45 KKLGIIGY-GHIGTQLGILAESLGMYVYFYDIEN   77 (188)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             eEEEEeec-ccchhhhhhhcccccceEeeccccc
Confidence            57788866 9999999999999999999999754

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=90.71  E-value=0.75  Score=33.14  Aligned_cols=73  Identities=18%  Similarity=0.226  Sum_probs=52.8

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG-FKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      +||=.|++.|-   .+..|+++|++|+.++.+++.++.+.+.....+ .++.+...|+.+..            +.+.+|
T Consensus        33 rvLDiGcG~G~---~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~------------~~~~fD   97 (198)
T d2i6ga1          33 RTLDLGCGNGR---NSLYLAANGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTLT------------FDGEYD   97 (198)
T ss_dssp             EEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCC------------CCCCEE
T ss_pred             cEEEECCCCCH---HHHHHHHHhhhhccccCcHHHHHHHHHHhhhccccchhhhheeccccc------------cccccc
Confidence            57778886543   567889999999999999998887766655544 35777778877532            115789


Q ss_pred             EEEEcCCCC
Q 024994           81 ILINNAAIA   89 (259)
Q Consensus        81 ~vi~~ag~~   89 (259)
                      +|+.+.-..
T Consensus        98 ~I~~~~~~~  106 (198)
T d2i6ga1          98 FILSTVVMM  106 (198)
T ss_dssp             EEEEESCGG
T ss_pred             EEEEeeeee
Confidence            998766543

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.68  E-value=0.58  Score=36.60  Aligned_cols=71  Identities=17%  Similarity=0.100  Sum_probs=49.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHH--hcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWK--NKGFKVTGSVCDLSSREQREKLIETVTSIFQG   77 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (259)
                      |+||-.|++.|+   ++..+++.|+ +|++++.++.... ..+...  ....++.++..|+.+...           -..
T Consensus        37 ~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~~~-a~~~~~~~~~~~~i~~~~~~~~~l~~-----------~~~  101 (311)
T d2fyta1          37 KVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEILYQ-AMDIIRLNKLEDTITLIKGKIEEVHL-----------PVE  101 (311)
T ss_dssp             CEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHHHH-HHHHHHHTTCTTTEEEEESCTTTSCC-----------SCS
T ss_pred             CEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHHHH-HHHHHHHhCCCccceEEEeeHHHhcC-----------ccc
Confidence            689999998886   6677888896 7999998876543 333322  224579999998876421           014


Q ss_pred             CccEEEEcC
Q 024994           78 KLNILINNA   86 (259)
Q Consensus        78 ~id~vi~~a   86 (259)
                      ++|+|+...
T Consensus       102 ~~D~Ivse~  110 (311)
T d2fyta1         102 KVDVIISEW  110 (311)
T ss_dssp             CEEEEEECC
T ss_pred             cceEEEEee
Confidence            799998753

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=90.65  E-value=0.62  Score=35.86  Aligned_cols=77  Identities=14%  Similarity=0.147  Sum_probs=51.7

Q ss_pred             EEEEEcCcch-HHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 024994            2 TALVTGGTRG-IGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG--FKVTGSVCDLSSREQREKLIETVTSIFQGK   78 (259)
Q Consensus         2 ~~lItG~s~g-iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (259)
                      +++-.|+++| |+.+++ +  ...++|++++.+++.++-+.+..+..+  .++.+...|+.+.-         .+.. ++
T Consensus       113 ~vld~g~GsG~i~~~la-~--~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~~---------~~~~-~~  179 (271)
T d1nv8a_         113 TVADIGTGSGAIGVSVA-K--FSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPF---------KEKF-AS  179 (271)
T ss_dssp             EEEEESCTTSHHHHHHH-H--HSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGG---------GGGT-TT
T ss_pred             EEEEeeeeeehhhhhhh-h--cccceeeechhhhhHHHHHHHHHHHcCCCceeEEeeccccccc---------cccc-Cc
Confidence            4554555555 554443 3  356899999999999887776666543  36777788886531         1122 58


Q ss_pred             ccEEEEcCCCCCC
Q 024994           79 LNILINNAAIAFV   91 (259)
Q Consensus        79 id~vi~~ag~~~~   91 (259)
                      +|++|.|.=+...
T Consensus       180 fDlIVsNPPYI~~  192 (271)
T d1nv8a_         180 IEMILSNPPYVKS  192 (271)
T ss_dssp             CCEEEECCCCBCG
T ss_pred             ccEEEEcccccCc
Confidence            9999999987643

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=90.63  E-value=0.19  Score=36.37  Aligned_cols=34  Identities=32%  Similarity=0.262  Sum_probs=30.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChh
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI   35 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~   35 (259)
                      |++.|.|. |.||+.+++.+...|.+|+..+|...
T Consensus        43 k~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~   76 (181)
T d1qp8a1          43 EKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPK   76 (181)
T ss_dssp             CEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ceEEEecc-ccccccceeeeecccccccccccccc
Confidence            68999998 77999999999999999999998753

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=90.62  E-value=1  Score=32.11  Aligned_cols=72  Identities=19%  Similarity=0.145  Sum_probs=49.4

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG--FKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      ++|=.|+++|   .++..|++.+.+|+.++.+++.++.+.+.++..+  .++.++++|..+      ..    ... ..+
T Consensus        36 ~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~~------~~----~~~-~~~  101 (186)
T d1l3ia_          36 VAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE------AL----CKI-PDI  101 (186)
T ss_dssp             EEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH------HH----TTS-CCE
T ss_pred             EEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchhh------cc----ccc-CCc
Confidence            3444566665   3345566778899999999999988888777654  588888887522      11    112 579


Q ss_pred             cEEEEcCC
Q 024994           80 NILINNAA   87 (259)
Q Consensus        80 d~vi~~ag   87 (259)
                      |.++.+..
T Consensus       102 D~v~~~~~  109 (186)
T d1l3ia_         102 DIAVVGGS  109 (186)
T ss_dssp             EEEEESCC
T ss_pred             CEEEEeCc
Confidence            99997654

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=90.50  E-value=0.84  Score=31.05  Aligned_cols=33  Identities=21%  Similarity=0.127  Sum_probs=28.3

Q ss_pred             CEEEEEcCcc---hHHHHHHHHHHHCCCEEEEeeCC
Q 024994            1 MTALVTGGTR---GIGHATVEELARFGAIVHTCSRN   33 (259)
Q Consensus         1 k~~lItG~s~---giG~~~a~~l~~~G~~V~~~~r~   33 (259)
                      |++.|.|+|.   ..|..+.+.|.+.|++++.+.-+
T Consensus        14 ksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~   49 (136)
T d1iuka_          14 KTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPR   49 (136)
T ss_dssp             CEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGG
T ss_pred             CeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEec
Confidence            6899999995   58999999999999998887543

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.22  E-value=0.19  Score=36.07  Aligned_cols=34  Identities=24%  Similarity=0.242  Sum_probs=31.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCCh
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ   34 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~   34 (259)
                      |+++|.|-|.=+|+-++..|.++|++|..+..+.
T Consensus        30 K~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~   63 (171)
T d1edza1          30 KKCIVINRSEIVGRPLAALLANDGATVYSVDVNN   63 (171)
T ss_dssp             CEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSE
T ss_pred             CEEEEECCccccHHHHHHHHHHCCCEEEEecccc
Confidence            7899999999999999999999999999988654

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=90.04  E-value=0.3  Score=35.35  Aligned_cols=36  Identities=28%  Similarity=0.259  Sum_probs=31.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIEL   37 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~   37 (259)
                      |++.|.|. |.||+++++.+...|.+|+..++...+.
T Consensus        45 k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~~   80 (184)
T d1ygya1          45 KTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSPA   80 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCHH
T ss_pred             eeeeeccc-cchhHHHHHHhhhccceEEeecCCCChh
Confidence            57788886 9999999999999999999999876543

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=90.01  E-value=0.24  Score=33.52  Aligned_cols=75  Identities=15%  Similarity=0.071  Sum_probs=52.7

Q ss_pred             CEEEEEcCc----------chHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Q 024994            1 MTALVTGGT----------RGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIET   70 (259)
Q Consensus         1 k~~lItG~s----------~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   70 (259)
                      |++||.|++          .--+.+.++.|.+.|++++++.-|++....-.    +..+++.|.+   -..+++.++++.
T Consensus         8 kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~----d~aD~lYfeP---lt~e~v~~Ii~~   80 (127)
T d1a9xa3           8 KSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDP----EMADATYIEP---IHWEVVRKIIEK   80 (127)
T ss_dssp             CEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCG----GGSSEEECSC---CCHHHHHHHHHH
T ss_pred             CEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcCh----hhcceeeeec---CCHHHHHHHHHH
Confidence            689999983          34678899999999999999999987653211    1134554433   345676666664


Q ss_pred             HHHHcCCCccEEEEcCCC
Q 024994           71 VTSIFQGKLNILINNAAI   88 (259)
Q Consensus        71 ~~~~~~~~id~vi~~ag~   88 (259)
                            .++|.++-..|.
T Consensus        81 ------E~pd~il~~~GG   92 (127)
T d1a9xa3          81 ------ERPDAVLPTMGG   92 (127)
T ss_dssp             ------HCCSEEECSSSH
T ss_pred             ------hCcCCeEEEeee
Confidence                  379999887774

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=90.00  E-value=2  Score=33.64  Aligned_cols=72  Identities=10%  Similarity=-0.012  Sum_probs=47.9

Q ss_pred             cCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHHHHHcCCCccEEEEc
Q 024994            7 GGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG-FKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINN   85 (259)
Q Consensus         7 G~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~vi~~   85 (259)
                      .++|+++.+    ++..+..|+.++.+...++.+.+.++..+ .++.++..|..+.      .+...+. +.++|.||.+
T Consensus       154 ~gtG~~s~~----~a~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~~------~~~~~~~-~~~fD~Vi~D  222 (318)
T d1wxxa2         154 SYAGGFALH----LALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDL------LRRLEKE-GERFDLVVLD  222 (318)
T ss_dssp             CTTTHHHHH----HHHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHH------HHHHHHT-TCCEEEEEEC
T ss_pred             CCCcHHHHH----HHhcCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHHH------hhhhHhh-hcCCCEEEEc
Confidence            344555444    34456799999999999988877776555 3688888887542      2222222 2579999998


Q ss_pred             CCCC
Q 024994           86 AAIA   89 (259)
Q Consensus        86 ag~~   89 (259)
                      +-..
T Consensus       223 pP~~  226 (318)
T d1wxxa2         223 PPAF  226 (318)
T ss_dssp             CCCS
T ss_pred             CCcc
Confidence            7543

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=89.94  E-value=0.43  Score=33.27  Aligned_cols=42  Identities=31%  Similarity=0.347  Sum_probs=31.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHC--CCEEEEee--CChhHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARF--GAIVHTCS--RNQIELDARLH   42 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~--G~~V~~~~--r~~~~~~~~~~   42 (259)
                      |++.|.|+||.||.....-+.+.  .++|++++  +|-+.+.+.++
T Consensus         3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~   48 (150)
T d1r0ka2           3 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAK   48 (150)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHH
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHH
Confidence            68999999999999999999876  46776654  45555544443

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=89.89  E-value=0.19  Score=39.54  Aligned_cols=32  Identities=28%  Similarity=0.327  Sum_probs=24.5

Q ss_pred             CEEEEEcCcchHHH-----HHHHHHHHCCCEEEEeeCC
Q 024994            1 MTALVTGGTRGIGH-----ATVEELARFGAIVHTCSRN   33 (259)
Q Consensus         1 k~~lItG~s~giG~-----~~a~~l~~~G~~V~~~~r~   33 (259)
                      |++||++|++| |-     +++++|.++|++|..++..
T Consensus         1 kkili~~~GtG-GHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTG-GHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSH-HHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEEcCCcH-HHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            78888876544 54     6889999999999876643

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=89.57  E-value=0.63  Score=34.70  Aligned_cols=73  Identities=14%  Similarity=-0.063  Sum_probs=50.7

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCccE
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNI   81 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~   81 (259)
                      +||-.|+++|--.+   .|++.+.+|+.+.++++..+...+.+. ...++.++..|..+.      ..    .. +++|.
T Consensus        73 ~VLdIG~GsGy~ta---~La~l~~~V~aiE~~~~~~~~A~~~~~-~~~nv~~~~~d~~~g------~~----~~-~pfD~  137 (224)
T d1vbfa_          73 KVLEIGTGIGYYTA---LIAEIVDKVVSVEINEKMYNYASKLLS-YYNNIKLILGDGTLG------YE----EE-KPYDR  137 (224)
T ss_dssp             EEEEECCTTSHHHH---HHHHHSSEEEEEESCHHHHHHHHHHHT-TCSSEEEEESCGGGC------CG----GG-CCEEE
T ss_pred             eEEEecCCCCHHHH---HHHHHhcccccccccHHHHHHHHHHHh-cccccccccCchhhc------ch----hh-hhHHH
Confidence            68889998885443   455556799999999988776655443 345888888887541      00    01 57999


Q ss_pred             EEEcCCCC
Q 024994           82 LINNAAIA   89 (259)
Q Consensus        82 vi~~ag~~   89 (259)
                      ++.+++..
T Consensus       138 Iiv~~a~~  145 (224)
T d1vbfa_         138 VVVWATAP  145 (224)
T ss_dssp             EEESSBBS
T ss_pred             HHhhcchh
Confidence            99888753

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=89.49  E-value=0.21  Score=36.57  Aligned_cols=35  Identities=20%  Similarity=0.109  Sum_probs=30.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE   36 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~   36 (259)
                      |++.|.|. |.||+.+++.+...|.+|+..++....
T Consensus        50 ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~   84 (193)
T d1mx3a1          50 ETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLSD   84 (193)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCT
T ss_pred             ceEEEecc-ccccccceeeeeccccceeeccCcccc
Confidence            68899987 999999999999999999999986543

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=89.47  E-value=0.86  Score=32.80  Aligned_cols=72  Identities=18%  Similarity=0.098  Sum_probs=50.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhc---CCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK---GFKVTGSVCDLSSREQREKLIETVTSIFQG   77 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (259)
                      ++||=.|+++|   .++..+++.+.+|++++.++...+...+.++..   ..++.++..|+.+.  +    +      ++
T Consensus        54 ~~VLDiGcG~G---~~~~~la~~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~~--~----~------~~  118 (194)
T d1dusa_          54 DDILDLGCGYG---VIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYEN--V----K------DR  118 (194)
T ss_dssp             CEEEEETCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTT--C----T------TS
T ss_pred             CeEEEEeecCC---hhHHHHHhhccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhhh--h----c------cC
Confidence            46677777666   345567778889999999988887766655533   33588888998642  1    0      15


Q ss_pred             CccEEEEcCC
Q 024994           78 KLNILINNAA   87 (259)
Q Consensus        78 ~id~vi~~ag   87 (259)
                      .+|+|+.+.-
T Consensus       119 ~fD~Ii~~~p  128 (194)
T d1dusa_         119 KYNKIITNPP  128 (194)
T ss_dssp             CEEEEEECCC
T ss_pred             CceEEEEccc
Confidence            7999998754

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=89.43  E-value=0.56  Score=34.25  Aligned_cols=67  Identities=21%  Similarity=0.193  Sum_probs=47.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      |+||=.|+++|+   ++..++..|+ +|+.++.++...+.+.+.    -.++.++.+|+.+              +++++
T Consensus        50 k~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N----~~~~~~~~~D~~~--------------l~~~f  108 (197)
T d1ne2a_          50 RSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRN----CGGVNFMVADVSE--------------ISGKY  108 (197)
T ss_dssp             SEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHH----CTTSEEEECCGGG--------------CCCCE
T ss_pred             CEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHc----cccccEEEEehhh--------------cCCcc
Confidence            567778888773   3445677775 699999998877654433    2367888898853              23689


Q ss_pred             cEEEEcCCC
Q 024994           80 NILINNAAI   88 (259)
Q Consensus        80 d~vi~~ag~   88 (259)
                      |+||.|.-+
T Consensus       109 D~Vi~NPPf  117 (197)
T d1ne2a_         109 DTWIMNPPF  117 (197)
T ss_dssp             EEEEECCCC
T ss_pred             eEEEeCccc
Confidence            999998654

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=89.17  E-value=0.19  Score=37.81  Aligned_cols=33  Identities=24%  Similarity=0.181  Sum_probs=29.0

Q ss_pred             EEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhH
Q 024994            3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE   36 (259)
Q Consensus         3 ~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~   36 (259)
                      |+|.|| |--|..+|..|+++|++|+++.++...
T Consensus         5 ViIIGa-G~aGl~aA~~la~~G~~V~liEk~~~~   37 (251)
T d2i0za1           5 VIVIGG-GPSGLMAAIGAAEEGANVLLLDKGNKL   37 (251)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence            678888 789999999999999999999987643

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.81  E-value=1.3  Score=32.87  Aligned_cols=77  Identities=17%  Similarity=0.048  Sum_probs=57.7

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhc------CCcEEEEEecCCCHHHHHHHHHHHHHHc
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK------GFKVTGSVCDLSSREQREKLIETVTSIF   75 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (259)
                      +||-.|+++|--.++..+++....+|+.++++++..+...+.+...      ..++.+...|..+...          ..
T Consensus        79 ~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~~~----------~~  148 (224)
T d1i1na_          79 KALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYA----------EE  148 (224)
T ss_dssp             EEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCG----------GG
T ss_pred             eEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeecccccc----------hh
Confidence            7899999999888888888888889999999998887766665432      2467777777642100          01


Q ss_pred             CCCccEEEEcCCCC
Q 024994           76 QGKLNILINNAAIA   89 (259)
Q Consensus        76 ~~~id~vi~~ag~~   89 (259)
                       +++|.++.+++..
T Consensus       149 -~~fD~I~~~~~~~  161 (224)
T d1i1na_         149 -APYDAIHVGAAAP  161 (224)
T ss_dssp             -CCEEEEEECSBBS
T ss_pred             -hhhhhhhhhcchh
Confidence             5799999998754

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.77  E-value=0.19  Score=38.77  Aligned_cols=33  Identities=15%  Similarity=0.045  Sum_probs=29.8

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChh
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQI   35 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~   35 (259)
                      .|+|.|| |-.|..+|..|.++|.+|+++.|..+
T Consensus         4 ~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGA-GPSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            3899999 69999999999999999999998764

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=88.56  E-value=0.51  Score=31.47  Aligned_cols=75  Identities=12%  Similarity=-0.017  Sum_probs=51.2

Q ss_pred             CEEEEEcCc----------chHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Q 024994            1 MTALVTGGT----------RGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIET   70 (259)
Q Consensus         1 k~~lItG~s----------~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   70 (259)
                      |++||.|++          .--+.+.++.|.+.|++++++.-|++....-.    +..+++.|.+.   ..+.+.++++.
T Consensus         5 kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~----d~aD~lYfepl---t~e~v~~Ii~~   77 (121)
T d1a9xa4           5 EKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDY----DTSDRLYFEPV---TLEDVLEIVRI   77 (121)
T ss_dssp             CEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTST----TSSSEEECCCC---SHHHHHHHHHH
T ss_pred             CEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcCh----hhcCceEEccC---CHHHHHHHHHH
Confidence            689999984          35677899999999999999999887653210    11334544333   44566555553


Q ss_pred             HHHHcCCCccEEEEcCCC
Q 024994           71 VTSIFQGKLNILINNAAI   88 (259)
Q Consensus        71 ~~~~~~~~id~vi~~ag~   88 (259)
                            .++|.++-..|.
T Consensus        78 ------E~p~~ii~~~GG   89 (121)
T d1a9xa4          78 ------EKPKGVIVQYGG   89 (121)
T ss_dssp             ------HCCSEEECSSST
T ss_pred             ------hCCCEEEeehhh
Confidence                  378988877774

>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Escherichia coli [TaxId: 562]

Probab=88.46  E-value=0.48  Score=36.56  Aligned_cols=70  Identities=13%  Similarity=0.043  Sum_probs=50.8

Q ss_pred             cCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHcCCCccEEEEc
Q 024994            7 GGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF-KVTGSVCDLSSREQREKLIETVTSIFQGKLNILINN   85 (259)
Q Consensus         7 G~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~vi~~   85 (259)
                      -|||-||.+++..+  ....|++++.+...++.+.+..+..+. ++.+++.|+.+.-            .+.++|++|.|
T Consensus       117 tGSG~I~i~la~~~--p~~~v~avDis~~Al~~A~~Na~~~~~~~v~~~~~d~~~~~------------~~~~fDlIvsN  182 (274)
T d2b3ta1         117 TGTGAIALALASER--PDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSAL------------AGQQFAMIVSN  182 (274)
T ss_dssp             CTTSHHHHHHHHHC--TTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGG------------TTCCEEEEEEC
T ss_pred             hhhhHHHHHHHhhC--CcceeeeccchhHHHhHHHHHHHHhCcccceeeeccccccc------------CCCceeEEEec
Confidence            35566777776654  357999999999998877766665554 6999999987531            11479999999


Q ss_pred             CCCCC
Q 024994           86 AAIAF   90 (259)
Q Consensus        86 ag~~~   90 (259)
                      .=+..
T Consensus       183 PPYi~  187 (274)
T d2b3ta1         183 PPYID  187 (274)
T ss_dssp             CCCBC
T ss_pred             chhhh
Confidence            87653

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=88.41  E-value=0.19  Score=35.77  Aligned_cols=29  Identities=14%  Similarity=-0.030  Sum_probs=24.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEe
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTC   30 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~   30 (259)
                      ++|+|.|| |.+|.++|..|.+.|.+|.++
T Consensus         4 ~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~   32 (185)
T d1q1ra1           4 DNVVIVGT-GLAGVEVAFGLRASGWEGNIR   32 (185)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEE
T ss_pred             CCEEEECC-cHHHHHHHHHHHHcCCceEEE
Confidence            47888888 999999999999999865443

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=88.33  E-value=0.54  Score=33.16  Aligned_cols=36  Identities=17%  Similarity=0.230  Sum_probs=31.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIEL   37 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~   37 (259)
                      |+++|.|= |-+|+.+|+.|...|++|+++..++-+.
T Consensus        24 k~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~a   59 (163)
T d1v8ba1          24 KIVVICGY-GDVGKGCASSMKGLGARVYITEIDPICA   59 (163)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHHH
T ss_pred             CEEEEecc-cccchhHHHHHHhCCCEEEEEecCchhh
Confidence            67788776 8899999999999999999999988553

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=88.21  E-value=0.045  Score=41.07  Aligned_cols=26  Identities=27%  Similarity=0.184  Sum_probs=23.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEE
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIV   27 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V   27 (259)
                      |+|+|.|| |-+|..+|.+|+++|++|
T Consensus         1 mkV~VIGa-Gi~GlstA~~L~~~G~~v   26 (246)
T d1kifa1           1 MRVVVIGA-GVIGLSTALCIHERYHSV   26 (246)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHHTTT
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCCCc
Confidence            57999999 899999999999999754

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=87.99  E-value=3  Score=32.59  Aligned_cols=71  Identities=17%  Similarity=0.096  Sum_probs=46.6

Q ss_pred             CcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHHcCCCccEEEE
Q 024994            8 GTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKG--FKVTGSVCDLSSREQREKLIETVTSIFQGKLNILIN   84 (259)
Q Consensus         8 ~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~vi~   84 (259)
                      ++|+++.+    ++..|+ .|+.++.++..++...+.+...+  .++.++..|+.+      ......+. +.++|.||.
T Consensus       155 g~G~~si~----~a~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~~------~~~~~~~~-~~~fD~Vi~  223 (324)
T d2as0a2         155 YTGGFAIH----AAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFE------EMEKLQKK-GEKFDIVVL  223 (324)
T ss_dssp             TTTHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH------HHHHHHHT-TCCEEEEEE
T ss_pred             cccchhhh----hhhcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhhh------hhHHHHhc-cCCCCchhc
Confidence            44555544    345676 79999999999888777766554  367888887743      22222222 257999998


Q ss_pred             cCCCC
Q 024994           85 NAAIA   89 (259)
Q Consensus        85 ~ag~~   89 (259)
                      ++-..
T Consensus       224 DpP~~  228 (324)
T d2as0a2         224 DPPAF  228 (324)
T ss_dssp             CCCCS
T ss_pred             CCccc
Confidence            87643

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=87.91  E-value=0.26  Score=38.35  Aligned_cols=31  Identities=23%  Similarity=0.308  Sum_probs=27.8

Q ss_pred             EEEEcCcchHHHHHHHHHHHCCCEEEEeeCCh
Q 024994            3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQ   34 (259)
Q Consensus         3 ~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~   34 (259)
                      |||.|+ |..|...|.+|+++|.+|+++.+..
T Consensus        19 VlVIG~-G~aGl~aA~~la~~G~~V~lvEK~~   49 (308)
T d1y0pa2          19 VVVVGS-GGAGFSAAISATDSGAKVILIEKEP   49 (308)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecCC
Confidence            678887 8999999999999999999998754

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=87.90  E-value=0.39  Score=33.33  Aligned_cols=35  Identities=11%  Similarity=0.002  Sum_probs=27.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCC-C---EEEEeeCChh
Q 024994            1 MTALVTGGTRGIGHATVEELARFG-A---IVHTCSRNQI   35 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G-~---~V~~~~r~~~   35 (259)
                      |++-|.||||-+|..+.+.|+++. +   +++...++..
T Consensus         2 kkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s   40 (146)
T d1t4ba1           2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQL   40 (146)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSST
T ss_pred             cEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccc
Confidence            678899999999999999888764 2   5666665543

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.80  E-value=0.34  Score=37.47  Aligned_cols=31  Identities=23%  Similarity=0.275  Sum_probs=27.2

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSR   32 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r   32 (259)
                      ++|+|.|| |-=|...|.+|.++|++|.++-+
T Consensus         6 ~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa   36 (449)
T d2dw4a2           6 GKVIIIGS-GVSGLAAARQLQSFGMDVTLLEA   36 (449)
T ss_dssp             CEEEEECC-BHHHHHHHHHHHHTTCEEEEECS
T ss_pred             CcEEEECC-CHHHHHHHHHHHhCCCCEEEEeC
Confidence            36899998 88899999999999999988744

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=87.80  E-value=0.12  Score=40.43  Aligned_cols=43  Identities=21%  Similarity=0.117  Sum_probs=33.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHh
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKN   46 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   46 (259)
                      ++||=.|++.|.   ++..|+++|++|+.++.+++.++.+.+....
T Consensus        58 ~~vLD~GcG~G~---~~~~la~~g~~v~gvD~S~~ml~~A~~~~~~  100 (292)
T d1xvaa_          58 HRVLDVACGTGV---DSIMLVEEGFSVTSVDASDKMLKYALKERWN  100 (292)
T ss_dssp             CEEEESSCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CEEEEecCCCcH---HHHHHHHcCCeeeeccCchHHHHHHHHHHHh
Confidence            467888887775   4667788999999999999988776655543

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=87.80  E-value=3.6  Score=31.98  Aligned_cols=70  Identities=13%  Similarity=0.012  Sum_probs=46.2

Q ss_pred             cCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhc---CCcEEEEEecCCCHHHHHHHHHHHHHHcCCCccEEE
Q 024994            7 GGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK---GFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILI   83 (259)
Q Consensus         7 G~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~vi   83 (259)
                      .++|+++.+    +++.|+.|+.++.+...++.+.+.....   ..++.++..|+.+      .+++..+.- .++|+||
T Consensus       141 ~~tG~~sl~----aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~~------~l~~~~~~~-~~fD~Ii  209 (309)
T d2igta1         141 GYTGVASLV----AAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMK------FIQREERRG-STYDIIL  209 (309)
T ss_dssp             CTTCHHHHH----HHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHH------HHHHHHHHT-CCBSEEE
T ss_pred             CCCcHHHHH----HHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHHH------hHHHHhhcC-CCCCEEE
Confidence            345555444    4567999999999999888776655433   2357888887743      333333332 5799999


Q ss_pred             EcCC
Q 024994           84 NNAA   87 (259)
Q Consensus        84 ~~ag   87 (259)
                      ...=
T Consensus       210 lDPP  213 (309)
T d2igta1         210 TDPP  213 (309)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            8854

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=87.51  E-value=2.5  Score=27.52  Aligned_cols=81  Identities=11%  Similarity=0.051  Sum_probs=53.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++||.--..-+-..+...|-+.|++|+....+....-+..+   +....+.++..++-+.+. -.+++++++.. ..+-
T Consensus         2 krILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~~al~~~~---~~~~dliilD~~mp~~~G-~e~~~~ir~~~-~~~p   76 (118)
T d1u0sy_           2 KRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREAVEKYK---ELKPDIVTMDITMPEMNG-IDAIKEIMKID-PNAK   76 (118)
T ss_dssp             CEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---HHCCSEEEEECSCGGGCH-HHHHHHHHHHC-TTCC
T ss_pred             CEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHHHHHHHHH---hccCCEEEEecCCCCCCH-HHHHHHHHHhC-CCCc
Confidence            789999999999999999999999999876655543333332   223455555444444433 35666676665 4566


Q ss_pred             EEEEcC
Q 024994           81 ILINNA   86 (259)
Q Consensus        81 ~vi~~a   86 (259)
                      +++..+
T Consensus        77 vi~ls~   82 (118)
T d1u0sy_          77 IIVCSA   82 (118)
T ss_dssp             EEEEEC
T ss_pred             EEEEEc
Confidence            666554

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=87.16  E-value=0.28  Score=37.08  Aligned_cols=36  Identities=17%  Similarity=0.234  Sum_probs=31.2

Q ss_pred             EEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHH
Q 024994            3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDA   39 (259)
Q Consensus         3 ~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~   39 (259)
                      |+|.|| |.-|...|.+|+++|.+|+++.++......
T Consensus         7 ViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~~G~k   42 (253)
T d2gqfa1           7 NIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKKIGRK   42 (253)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSSSCHH
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecCCCCCCc
Confidence            788888 889999999999999999999998765443

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=87.09  E-value=1.1  Score=31.60  Aligned_cols=69  Identities=10%  Similarity=0.096  Sum_probs=41.0

Q ss_pred             cCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCccEEEEcC
Q 024994            7 GGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNA   86 (259)
Q Consensus         7 G~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~vi~~a   86 (259)
                      .|+|.+|.    +++.+|+.|+.++.+....+.+.+.++..+....+...   +.+.   +........ .++|+||.++
T Consensus        50 ~G~G~~~i----~a~~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~---~~d~---~~~~~~~~~-~~fD~If~DP  118 (171)
T d1ws6a1          50 AGSGAVGL----EAASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVAL---PVEV---FLPEAKAQG-ERFTVAFMAP  118 (171)
T ss_dssp             CSSCHHHH----HHHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECS---CHHH---HHHHHHHTT-CCEEEEEECC
T ss_pred             cccchhhh----hhhhccchhhhcccCHHHHhhhhHHHHhhccccceeee---ehhc---ccccccccC-CccceeEEcc
Confidence            44555553    56678999999999999887776666654433332222   2222   222222222 5799999875

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=86.98  E-value=3.6  Score=28.81  Aligned_cols=75  Identities=20%  Similarity=0.212  Sum_probs=44.8

Q ss_pred             CEEEEEcCcchHHHH--HHHHHHHC----CCEEEEeeCChhHHHHHHHHHHh----cCCcEEEEEecCCCHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHA--TVEELARF----GAIVHTCSRNQIELDARLHEWKN----KGFKVTGSVCDLSSREQREKLIET   70 (259)
Q Consensus         1 k~~lItG~s~giG~~--~a~~l~~~----G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~   70 (259)
                      +++.|.|| |.+|..  +...++..    +.+++++|+++++++.....++.    .+....+..  .+|.++   ++  
T Consensus         3 mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~--~td~~e---aL--   74 (171)
T d1obba1           3 VKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEK--TMNLDD---VI--   74 (171)
T ss_dssp             CEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEE--ESCHHH---HH--
T ss_pred             cEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEE--eCChhh---cc--
Confidence            46788887 666654  44445543    45899999999887654444332    222232222  223222   22  


Q ss_pred             HHHHcCCCccEEEEcCCCC
Q 024994           71 VTSIFQGKLNILINNAAIA   89 (259)
Q Consensus        71 ~~~~~~~~id~vi~~ag~~   89 (259)
                            ...|+||+.++..
T Consensus        75 ------~dad~Vv~~~~~g   87 (171)
T d1obba1          75 ------IDADFVINTAMVG   87 (171)
T ss_dssp             ------TTCSEEEECCCTT
T ss_pred             ------cCCCeEeeecccc
Confidence                  4789999999864

>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: YxiM C-terminal domain-like
domain: Hypothetical protein YxiM
species: Bacillus subtilis [TaxId: 1423]

Probab=86.89  E-value=1.8  Score=30.97  Aligned_cols=104  Identities=12%  Similarity=0.129  Sum_probs=56.2

Q ss_pred             CEEEEEcCcch-------------HHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHH
Q 024994            1 MTALVTGGTRG-------------IGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKL   67 (259)
Q Consensus         1 k~~lItG~s~g-------------iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   67 (259)
                      ||+++.|-|--             -+..++++|-.++.+|+-.+.+-........+                      ..
T Consensus         4 ~ti~~~GDS~~~g~~~~~~~~~~Gw~~~L~~~l~~~~~~v~N~gi~G~t~~~~~~~----------------------~~   61 (208)
T d2o14a2           4 RTIYVGGDSTVCNYYPLNSSKQAGWGQMLPHYIDKHTFQVRNMASGGQIARGFRND----------------------GQ   61 (208)
T ss_dssp             CEEEEEECTTTSCCSSTTTCSBCCHHHHGGGTSCTTTCEEEECCCTTCCHHHHHHS----------------------SH
T ss_pred             CEEEEEEcccccCcCCCCCCCCCCHHHHHHHHhCCCceEEEeCeechhhhccHhhh----------------------hh
Confidence            68999998833             44556666655677887777655443332211                      01


Q ss_pred             HHHHHHHcCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHhhHhHHHHHHHHHHHhHhCCCCEEEEecCCC
Q 024994           68 IETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVG  139 (259)
Q Consensus        68 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~isS~~  139 (259)
                      +.++.... .+.|+||...|..........+.+++.+.    +...       +..+++. +..++.+++..
T Consensus        62 ~~~~~~~~-~~~D~vvi~~G~ND~~~~~~~~~~~~~~~----l~~l-------i~~~~~~-~~~~vl~~~~~  120 (208)
T d2o14a2          62 LEAILKYI-KPGDYFMLQLGINDTNPKHKESEAEFKEV----MRDM-------IRQVKAK-GADVILSTPQG  120 (208)
T ss_dssp             HHHHHTTC-CTTCEEEEECCTGGGCGGGCCCHHHHHHH----HHHH-------HHHHHTT-TCEEEEECCCC
T ss_pred             HHHHHHhc-CCCCEEEEEcCCCcccccccccHHHHHHH----HHHH-------HHHHHhc-CCceeeccccc
Confidence            22222333 46799999888764333333455555432    2222       2222333 56777776643

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=86.67  E-value=0.42  Score=33.01  Aligned_cols=34  Identities=24%  Similarity=0.288  Sum_probs=26.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC---EEEEeeCCh
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA---IVHTCSRNQ   34 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~---~V~~~~r~~   34 (259)
                      ++|.|.||||.+|.++.+.|.++++   ++..+..+.
T Consensus         3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~   39 (144)
T d2hjsa1           3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAE   39 (144)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecc
Confidence            4688999999999999999987654   566655443

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=86.52  E-value=0.62  Score=33.80  Aligned_cols=35  Identities=17%  Similarity=0.150  Sum_probs=30.6

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE   36 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~   36 (259)
                      |++.|.|. |.||+.+++.+...|.+|+..++....
T Consensus        48 ~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~   82 (191)
T d1gdha1          48 KTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRAS   82 (191)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCC
T ss_pred             cceEEeec-ccchHHHHHHHHhhccccccccccccc
Confidence            67888887 999999999999999999999976543

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=86.46  E-value=0.36  Score=35.73  Aligned_cols=32  Identities=16%  Similarity=0.197  Sum_probs=27.3

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCCh
Q 024994            2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQ   34 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~   34 (259)
                      .|+|.|| |--|...|.+|.++|. +|+++.++.
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGA-GMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            3788888 8899999999999996 699987754

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=86.40  E-value=1  Score=32.24  Aligned_cols=69  Identities=12%  Similarity=0.056  Sum_probs=47.2

Q ss_pred             cCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHcCCCccEEE
Q 024994            7 GGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILI   83 (259)
Q Consensus         7 G~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~vi   83 (259)
                      .|||.+|.+    .+.+|+ .|+.++.+.+..+.+.+.++..  ..++.++..|+.+      .+++....- .++|+||
T Consensus        50 aGsG~~g~e----a~srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~D~~~------~l~~~~~~~-~~fDlIf  118 (182)
T d2fhpa1          50 SGSGGLAIE----AVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANR------ALEQFYEEK-LQFDLVL  118 (182)
T ss_dssp             CTTCHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH------HHHHHHHTT-CCEEEEE
T ss_pred             cccccccce----eeecchhHHHHHHHHHHHHHHHHHHhhhhhcccccccccccchh------hhhhhcccC-CCcceEE
Confidence            567778875    455887 6999999998887776666533  3368888888743      333333322 4799999


Q ss_pred             EcC
Q 024994           84 NNA   86 (259)
Q Consensus        84 ~~a   86 (259)
                      ..+
T Consensus       119 lDP  121 (182)
T d2fhpa1         119 LDP  121 (182)
T ss_dssp             ECC
T ss_pred             ech
Confidence            776

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=86.37  E-value=0.53  Score=34.00  Aligned_cols=35  Identities=26%  Similarity=0.368  Sum_probs=30.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE   36 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~   36 (259)
                      |++.|.|. |.||+++++.|...|.+|+..++....
T Consensus        45 ~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~   79 (188)
T d2naca1          45 MHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLP   79 (188)
T ss_dssp             CEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCC
T ss_pred             cceeeccc-cccchhhhhhhhccCceEEEEeecccc
Confidence            57778886 999999999999999999999986543

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=86.37  E-value=0.27  Score=38.38  Aligned_cols=32  Identities=16%  Similarity=0.281  Sum_probs=28.1

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeCCh
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQ   34 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~   34 (259)
                      -+||.|| |--|..+|++|+++|.+|.++.++.
T Consensus         3 dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~   34 (298)
T d1i8ta1           3 DYIIVGS-GLFGAVCANELKKLNKKVLVIEKRN   34 (298)
T ss_dssp             EEEEECC-SHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred             cEEEECC-cHHHHHHHHHHHhCCCcEEEEECCC
Confidence            4788888 8999999999999999999988654

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=86.21  E-value=1.2  Score=31.90  Aligned_cols=75  Identities=7%  Similarity=0.023  Sum_probs=50.0

Q ss_pred             cCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCccEEEEcC
Q 024994            7 GGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNA   86 (259)
Q Consensus         7 G~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~vi~~a   86 (259)
                      -||-|-|-+ .+.+++++.+|+++||+++.++...+ .  ...++.+++.+.++.+.   .+....  . +++|.++..-
T Consensus        24 D~T~G~GGh-s~~iL~~~~~viaiD~D~~ai~~a~~-~--~~~~~~~~~~~f~~~~~---~l~~~~--~-~~vdgIl~DL   93 (182)
T d1wg8a2          24 DATLGGAGH-ARGILERGGRVIGLDQDPEAVARAKG-L--HLPGLTVVQGNFRHLKR---HLAALG--V-ERVDGILADL   93 (182)
T ss_dssp             ETTCTTSHH-HHHHHHTTCEEEEEESCHHHHHHHHH-T--CCTTEEEEESCGGGHHH---HHHHTT--C-SCEEEEEEEC
T ss_pred             EeCCCCcHH-HHHHhcccCcEEEEhhhhhHHHHHhh-c--cccceeEeehHHHHHHH---HHHHcC--C-CccCEEEEEc
Confidence            344455555 45566677899999999988765433 2  24578999988887544   332211  1 5799999999


Q ss_pred             CCCCC
Q 024994           87 AIAFV   91 (259)
Q Consensus        87 g~~~~   91 (259)
                      |+...
T Consensus        94 GvSs~   98 (182)
T d1wg8a2          94 GVSSF   98 (182)
T ss_dssp             SCCHH
T ss_pred             cCCHH
Confidence            97543

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=86.18  E-value=1.5  Score=32.04  Aligned_cols=75  Identities=13%  Similarity=0.006  Sum_probs=53.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      ++||=.|++.|.-   +..|+++|.+|+.++.+++.++.+.+.+... ..++.++..|..+..     +.      .+.+
T Consensus        17 ~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l~-----~~------~~~f   82 (231)
T d1vl5a_          17 EEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP-----FT------DERF   82 (231)
T ss_dssp             CEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC-----SC------TTCE
T ss_pred             CEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhccccccccccccccccccccc-----cc------cccc
Confidence            3678888887743   4667888999999999998887765555443 357889999887631     00      1579


Q ss_pred             cEEEEcCCCC
Q 024994           80 NILINNAAIA   89 (259)
Q Consensus        80 d~vi~~ag~~   89 (259)
                      |+|+......
T Consensus        83 D~v~~~~~l~   92 (231)
T d1vl5a_          83 HIVTCRIAAH   92 (231)
T ss_dssp             EEEEEESCGG
T ss_pred             cccccccccc
Confidence            9999887754

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=86.16  E-value=4  Score=28.50  Aligned_cols=75  Identities=8%  Similarity=0.067  Sum_probs=42.2

Q ss_pred             EEEEEcC-cchHHHHHHHHHHHCC----CEEEEeeCChhH--HHHHHHH----HHhcCCcEEEEEecCCCHHHHHHHHHH
Q 024994            2 TALVTGG-TRGIGHATVEELARFG----AIVHTCSRNQIE--LDARLHE----WKNKGFKVTGSVCDLSSREQREKLIET   70 (259)
Q Consensus         2 ~~lItG~-s~giG~~~a~~l~~~G----~~V~~~~r~~~~--~~~~~~~----~~~~~~~~~~~~~D~~~~~~~~~~~~~   70 (259)
                      ++.|.|| |.|.+..++..+....    ..+++.+.++++  ++.....    ....+....  ....+|..+   .+  
T Consensus         3 KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~--~~~~td~~~---al--   75 (169)
T d1s6ya1           3 KIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIE--IHLTLDRRR---AL--   75 (169)
T ss_dssp             EEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCE--EEEESCHHH---HH--
T ss_pred             EEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCce--eeecCCchh---hc--
Confidence            5777776 4566677766665542    389999998754  3322111    111122222  233444322   12  


Q ss_pred             HHHHcCCCccEEEEcCCCC
Q 024994           71 VTSIFQGKLNILINNAAIA   89 (259)
Q Consensus        71 ~~~~~~~~id~vi~~ag~~   89 (259)
                            ..-|+||+.++..
T Consensus        76 ------~gaDvVv~ta~~~   88 (169)
T d1s6ya1          76 ------DGADFVTTQFRVG   88 (169)
T ss_dssp             ------TTCSEEEECCCTT
T ss_pred             ------CCCCEEEEccccC
Confidence                  4679999999975

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.04  E-value=0.49  Score=32.19  Aligned_cols=33  Identities=21%  Similarity=0.270  Sum_probs=27.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHH----CCCEEEEeeCCh
Q 024994            1 MTALVTGGTRGIGHATVEELAR----FGAIVHTCSRNQ   34 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~----~G~~V~~~~r~~   34 (259)
                      |+++|.|| |.+|.++|..|++    .|.+|.++.+.+
T Consensus        38 k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~   74 (137)
T d1m6ia2          38 KSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEK   74 (137)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEecccc
Confidence            57888887 9999999998863    588999887754

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.81  E-value=0.4  Score=40.79  Aligned_cols=32  Identities=13%  Similarity=0.132  Sum_probs=27.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRN   33 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~   33 (259)
                      .+|+|.|+ ||+|.++++.|+..|. .++++|.+
T Consensus        26 s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d   58 (529)
T d1yova1          26 AHVCLINA-TATGTEILKNLVLPGIGSFTIIDGN   58 (529)
T ss_dssp             CEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCS
T ss_pred             CCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCC
Confidence            36899987 8999999999999996 78887653

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=85.63  E-value=0.29  Score=37.46  Aligned_cols=35  Identities=26%  Similarity=0.369  Sum_probs=30.1

Q ss_pred             CEEEEEcCcchHHHHH-----HHHHHHCCCEEEEeeCChh
Q 024994            1 MTALVTGGTRGIGHAT-----VEELARFGAIVHTCSRNQI   35 (259)
Q Consensus         1 k~~lItG~s~giG~~~-----a~~l~~~G~~V~~~~r~~~   35 (259)
                      ++++|+.|=||+|+.+     |..|+++|.+|.+++-+..
T Consensus        20 ~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          20 HGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             CEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             CEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            4678888899999986     7899999999999998864

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.59  E-value=0.41  Score=37.31  Aligned_cols=30  Identities=27%  Similarity=0.230  Sum_probs=26.4

Q ss_pred             EEEEcCcchHHHHHHHHHHHCCCEEEEeeCC
Q 024994            3 ALVTGGTRGIGHATVEELARFGAIVHTCSRN   33 (259)
Q Consensus         3 ~lItG~s~giG~~~a~~l~~~G~~V~~~~r~   33 (259)
                      |+|.|| |--|...|.+|+++|++|+++.++
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~   31 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEAR   31 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecC
Confidence            678888 788999999999999999998754

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=85.18  E-value=1.9  Score=33.50  Aligned_cols=72  Identities=24%  Similarity=0.111  Sum_probs=48.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHh--cCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKN--KGFKVTGSVCDLSSREQREKLIETVTSIFQG   77 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (259)
                      |+||-.|++.|+   ++..+++.|+ +|+.++.++. .....+....  ...++.++..|+.+.+.           -..
T Consensus        35 ~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~~~~~~~~-----------~~~   99 (316)
T d1oria_          35 KVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSI-SDYAVKIVKANKLDHVVTIIKGKVEEVEL-----------PVE   99 (316)
T ss_dssp             CEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCTTTCCC-----------SSS
T ss_pred             CEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHH-HhhhhhHHHHhCCccccceEeccHHHccc-----------ccc
Confidence            688999998885   5667888886 6999998764 3333333332  24579999998876421           014


Q ss_pred             CccEEEEcCC
Q 024994           78 KLNILINNAA   87 (259)
Q Consensus        78 ~id~vi~~ag   87 (259)
                      ++|+++..--
T Consensus       100 ~~D~ivs~~~  109 (316)
T d1oria_         100 KVDIIISEWM  109 (316)
T ss_dssp             CEEEEEECCC
T ss_pred             eeEEEeeeee
Confidence            6999987533

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=85.06  E-value=0.48  Score=37.32  Aligned_cols=34  Identities=18%  Similarity=0.087  Sum_probs=29.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCC--CEEEEeeCChh
Q 024994            1 MTALVTGGTRGIGHATVEELARFG--AIVHTCSRNQI   35 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G--~~V~~~~r~~~   35 (259)
                      |+|+|+|| |--|..+|..|+++|  .+|++..|+..
T Consensus         5 KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~~   40 (335)
T d2gv8a1           5 RKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRGS   40 (335)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred             CeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence            78999998 888999999999887  58999888754

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=85.00  E-value=0.43  Score=37.27  Aligned_cols=33  Identities=24%  Similarity=0.228  Sum_probs=28.9

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChh
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQI   35 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~   35 (259)
                      -|+|+|| |--|.++|.+|.++|.+|+++.++++
T Consensus         9 dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~~   41 (298)
T d1w4xa1           9 DVLVVGA-GFSGLYALYRLRELGRSVHVIETAGD   41 (298)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CEEEECc-cHHHHHHHHHHHhCCCCEEEEEcCCC
Confidence            3788998 88999999999999999999987653

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=84.36  E-value=0.6  Score=32.43  Aligned_cols=30  Identities=13%  Similarity=0.178  Sum_probs=25.4

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeCC
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSRN   33 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~   33 (259)
                      +++|.|| |.+|.++|..|. ++.+|.++.+.
T Consensus         2 rVvIIGg-G~~G~e~A~~l~-~~~~Vtvv~~~   31 (167)
T d1xhca1           2 KVVIVGN-GPGGFELAKQLS-QTYEVTVIDKE   31 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHT-TTSEEEEECSS
T ss_pred             eEEEECC-cHHHHHHHHHHH-cCCCEEEEecc
Confidence            6888888 799999999985 57899998864

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=84.35  E-value=0.66  Score=34.86  Aligned_cols=32  Identities=19%  Similarity=0.149  Sum_probs=28.0

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCC-EEEEeeCCh
Q 024994            2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQ   34 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~-~V~~~~r~~   34 (259)
                      .|+|.|| |--|..+|..|.++|. +|.++.|..
T Consensus         3 ~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~   35 (288)
T d3c96a1           3 DILIAGA-GIGGLSCALALHQAGIGKVTLLESSS   35 (288)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence            6889998 7889999999999995 888888765

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=84.26  E-value=1.1  Score=32.80  Aligned_cols=75  Identities=12%  Similarity=0.202  Sum_probs=50.1

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCccE
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNI   81 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~   81 (259)
                      +||=.|+++|.-......+...| +|++++.++..++.+.+..+.. .++.++..|..+.......       + ..+|+
T Consensus        59 ~VLDlGcG~G~~~~~la~~v~~g-~V~gvDis~~~i~~a~~~a~~~-~ni~~i~~d~~~~~~~~~~-------~-~~vd~  128 (209)
T d1nt2a_          59 RVLYLGAASGTTVSHLADIVDEG-IIYAVEYSAKPFEKLLELVRER-NNIIPLLFDASKPWKYSGI-------V-EKVDL  128 (209)
T ss_dssp             EEEEETCTTSHHHHHHHHHTTTS-EEEEECCCHHHHHHHHHHHHHC-SSEEEECSCTTCGGGTTTT-------C-CCEEE
T ss_pred             EEEEeCCcCCHHHHHHHHhccCC-eEEEEeCCHHHHHHHHHHhhcc-CCceEEEeeccCccccccc-------c-ceEEE
Confidence            67778888885443333344445 8999999999988877766554 4788888888875442221       1 35777


Q ss_pred             EEEcC
Q 024994           82 LINNA   86 (259)
Q Consensus        82 vi~~a   86 (259)
                      +++.-
T Consensus       129 v~~~~  133 (209)
T d1nt2a_         129 IYQDI  133 (209)
T ss_dssp             EEECC
T ss_pred             EEecc
Confidence            76643

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=84.24  E-value=0.61  Score=33.60  Aligned_cols=33  Identities=27%  Similarity=0.343  Sum_probs=27.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCC--CEEEEeeCCh
Q 024994            1 MTALVTGGTRGIGHATVEELARFG--AIVHTCSRNQ   34 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G--~~V~~~~r~~   34 (259)
                      |+++|.|| |.+|.++|..|.+.+  .+|+++.|+.
T Consensus         1 ~KVvIIGg-G~~G~e~A~~l~~~~~~~~V~v~~~~~   35 (198)
T d1nhpa1           1 MKVIVLGS-SHGGYEAVEELLNLHPDAEIQWYEKGD   35 (198)
T ss_dssp             CEEEEECS-SHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred             CEEEEECC-cHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            68999998 799999999998874  5788887753

>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-epi-vancosaminyltransferase GtfA
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=84.02  E-value=2.3  Score=33.26  Aligned_cols=32  Identities=34%  Similarity=0.441  Sum_probs=22.8

Q ss_pred             CEEEEE-cCcchH---HHHHHHHHHHCCCEEEEeeC
Q 024994            1 MTALVT-GGTRGI---GHATVEELARFGAIVHTCSR   32 (259)
Q Consensus         1 k~~lIt-G~s~gi---G~~~a~~l~~~G~~V~~~~r   32 (259)
                      |+|||+ +||+|=   =.++|++|.++|++|+++..
T Consensus         1 mril~~~~gt~Ghi~P~laLA~~L~~rGh~V~~~~~   36 (391)
T d1pn3a_           1 MRVLITGCGSRGDTEPLVALAARLRELGADARMCLP   36 (391)
T ss_dssp             CEEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEEcCCChhHHHHHHHHHHHHHHCCCEEEEEEC
Confidence            567775 454322   24589999999999988874

>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella putrefaciens [TaxId: 24]

Probab=83.87  E-value=0.47  Score=37.12  Aligned_cols=31  Identities=23%  Similarity=0.290  Sum_probs=27.4

Q ss_pred             EEEEcCcchHHHHHHHHHHHCCCEEEEeeCCh
Q 024994            3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQ   34 (259)
Q Consensus         3 ~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~   34 (259)
                      |+|.|+ |.-|...|..|+++|.+|+++.+..
T Consensus        26 VvVIG~-G~aGl~aA~~la~~G~~V~llEk~~   56 (322)
T d1d4ca2          26 VVIIGS-GGAGLAAAVSARDAGAKVILLEKEP   56 (322)
T ss_dssp             EEEECS-SHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            677777 8899999999999999999998754

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=83.87  E-value=0.52  Score=35.95  Aligned_cols=30  Identities=27%  Similarity=0.330  Sum_probs=27.0

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEee
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCS   31 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~   31 (259)
                      |+++|.| .|-+|..+++.|.+.|++|+.++
T Consensus        37 ~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs   66 (255)
T d1bgva1          37 KTVALAG-FGNVAWGAAKKLAELGAKAVTLS   66 (255)
T ss_dssp             CEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence            6888988 59999999999999999988775

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=83.81  E-value=0.34  Score=35.79  Aligned_cols=34  Identities=26%  Similarity=0.303  Sum_probs=28.6

Q ss_pred             CEEEEEcCcchHHHH-----HHHHHHHCCCEEEEeeCCh
Q 024994            1 MTALVTGGTRGIGHA-----TVEELARFGAIVHTCSRNQ   34 (259)
Q Consensus         1 k~~lItG~s~giG~~-----~a~~l~~~G~~V~~~~r~~   34 (259)
                      |++.|+++-||.|+.     +|..|+++|.+|.++|-+.
T Consensus         2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~   40 (232)
T d1hyqa_           2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI   40 (232)
T ss_dssp             EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            689999999999975     5678899999999998653

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=83.79  E-value=0.6  Score=32.53  Aligned_cols=24  Identities=25%  Similarity=0.329  Sum_probs=21.9

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCC
Q 024994            2 TALVTGGTRGIGHATVEELARFGA   25 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~   25 (259)
                      +|.|.||||..|.++.+.|.++.+
T Consensus         3 kVaIvGATGyvG~eLirlL~~H~f   26 (154)
T d2gz1a1           3 TVAVVGATGAVGAQMIKMLEESTL   26 (154)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCCS
T ss_pred             EEEEECCCcHHHHHHHHHHHcCCC
Confidence            588999999999999999999865

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=83.67  E-value=0.61  Score=32.87  Aligned_cols=83  Identities=11%  Similarity=0.130  Sum_probs=52.9

Q ss_pred             EEEEEcCcchHHHHHHHHHHHC-CCEEE-EeeCChhHHH-HHHHH--------------HHhcCCcEEEEEecCCCHHHH
Q 024994            2 TALVTGGTRGIGHATVEELARF-GAIVH-TCSRNQIELD-ARLHE--------------WKNKGFKVTGSVCDLSSREQR   64 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~-G~~V~-~~~r~~~~~~-~~~~~--------------~~~~~~~~~~~~~D~~~~~~~   64 (259)
                      ++.|.|++|-.|+++++...+. ++.++ .++|...... ....+              +...-..+. +..|+|.++..
T Consensus         6 kI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~D-ViIDFs~p~~~   84 (162)
T d1diha1           6 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFD-VFIDFTRPEGT   84 (162)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCS-EEEECSCHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHhcccc-eEEEeccHHHH
Confidence            6899999999999999999886 55543 3444322110 00000              000001111 45899999999


Q ss_pred             HHHHHHHHHHcCCCccEEEEcCCC
Q 024994           65 EKLIETVTSIFQGKLNILINNAAI   88 (259)
Q Consensus        65 ~~~~~~~~~~~~~~id~vi~~ag~   88 (259)
                      ...++.+.+   .+..+|+=..|+
T Consensus        85 ~~~~~~a~~---~~~~~ViGTTG~  105 (162)
T d1diha1          85 LNHLAFCRQ---HGKGMVIGTTGF  105 (162)
T ss_dssp             HHHHHHHHH---TTCEEEECCCCC
T ss_pred             HHHHHHHHh---ccceeEEecCCC
Confidence            999887766   468888888884

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=83.44  E-value=2  Score=31.61  Aligned_cols=73  Identities=14%  Similarity=0.054  Sum_probs=52.3

Q ss_pred             EEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG-FKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      +||=.|++.|.   ++..|++++.+|+.++.+...++.+.+.+...+ .++.+++.|..+..     +.      .+.+|
T Consensus        19 rILDiGcGtG~---~~~~la~~~~~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~~~-----~~------~~~fD   84 (234)
T d1xxla_          19 RVLDIGAGAGH---TALAFSPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP-----FP------DDSFD   84 (234)
T ss_dssp             EEEEESCTTSH---HHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC-----SC------TTCEE
T ss_pred             EEEEeCCcCcH---HHHHHHHhCCeEEEEeCChhhhhhhhhhhccccccccccccccccccc-----cc------ccccc
Confidence            57778887774   456777889999999999988877666555443 46999999987531     00      15799


Q ss_pred             EEEEcCCC
Q 024994           81 ILINNAAI   88 (259)
Q Consensus        81 ~vi~~ag~   88 (259)
                      +|+.+-.+
T Consensus        85 ~v~~~~~l   92 (234)
T d1xxla_          85 IITCRYAA   92 (234)
T ss_dssp             EEEEESCG
T ss_pred             eeeeecee
Confidence            88877654

>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermotoga maritima [TaxId: 2336]

Probab=83.43  E-value=3  Score=32.17  Aligned_cols=74  Identities=15%  Similarity=0.339  Sum_probs=47.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCC--CEEEEeeCChhHHHHHHHHHHh-----cCCcEEEEEecCCCHHHHHHHHHHHHH
Q 024994            1 MTALVTGGTRGIGHATVEELARFG--AIVHTCSRNQIELDARLHEWKN-----KGFKVTGSVCDLSSREQREKLIETVTS   73 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~   73 (259)
                      |+|||.|+++|   .++++++++.  ..|.++..+++-.+...+-+..     ...++.++..|-.      +.++   +
T Consensus        91 k~VLiiGgG~G---~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv~v~~~Da~------~~l~---~  158 (295)
T d1inla_          91 KKVLIIGGGDG---GTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGA------EYVR---K  158 (295)
T ss_dssp             CEEEEEECTTC---HHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHH------HHGG---G
T ss_pred             ceEEEecCCch---HHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhhcccccCCCcEEEhhhHH------HHHh---c
Confidence            68999999887   5577777763  4799999998876554433221     1457777766642      1222   2


Q ss_pred             HcCCCccEEEEcCC
Q 024994           74 IFQGKLNILINNAA   87 (259)
Q Consensus        74 ~~~~~id~vi~~ag   87 (259)
                       ...+.|+||.-.-
T Consensus       159 -~~~~yDvIi~D~~  171 (295)
T d1inla_         159 -FKNEFDVIIIDST  171 (295)
T ss_dssp             -CSSCEEEEEEEC-
T ss_pred             -CCCCCCEEEEcCC
Confidence             2257999998754

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=83.39  E-value=8.3  Score=29.83  Aligned_cols=75  Identities=16%  Similarity=0.058  Sum_probs=48.6

Q ss_pred             EEEEE-cCcchHHHHHHHHHHHCCC-EEEEeeCChhHHHHHHHHHHhcC---CcEEEEEecCCCHHHHHHHHHHHHHHcC
Q 024994            2 TALVT-GGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKG---FKVTGSVCDLSSREQREKLIETVTSIFQ   76 (259)
Q Consensus         2 ~~lIt-G~s~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (259)
                      +||=. .++|+++.+    .+..|+ .|+.++.+...++...+..+..+   .++.+++.|+.+      .++...+.- 
T Consensus       147 ~VLdlf~~~G~~sl~----aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~~------~l~~~~~~~-  215 (317)
T d2b78a2         147 TVLNLFSYTAAFSVA----AAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFD------YFKYARRHH-  215 (317)
T ss_dssp             EEEEETCTTTHHHHH----HHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHH------HHHHHHHTT-
T ss_pred             ceeecCCCCcHHHHH----HHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHHH------HHHHHHhhc-
Confidence            44433 455555543    445777 69999999998877776665442   468888888743      333333332 


Q ss_pred             CCccEEEEcCC
Q 024994           77 GKLNILINNAA   87 (259)
Q Consensus        77 ~~id~vi~~ag   87 (259)
                      .++|+||..+-
T Consensus       216 ~~fD~Ii~DPP  226 (317)
T d2b78a2         216 LTYDIIIIDPP  226 (317)
T ss_dssp             CCEEEEEECCC
T ss_pred             CCCCEEEEcCh
Confidence            57999999864

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=83.34  E-value=1  Score=31.32  Aligned_cols=33  Identities=21%  Similarity=0.197  Sum_probs=27.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCE-EEEeeCCh
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAI-VHTCSRNQ   34 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~-V~~~~r~~   34 (259)
                      |+|+|.|| |..|-..|..+.+.|+. |+++.|..
T Consensus        46 ~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          46 GAVIVLGA-GDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             SEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             CEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            46888877 89999999999999984 77777654

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=83.33  E-value=0.21  Score=34.66  Aligned_cols=39  Identities=18%  Similarity=-0.000  Sum_probs=27.6

Q ss_pred             EEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHH
Q 024994            5 VTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEW   44 (259)
Q Consensus         5 ItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~   44 (259)
                      +.| +|-+|+++++.|.+.+..+.+.+|+.++.+++.++.
T Consensus         4 fIG-~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~   42 (153)
T d2i76a2           4 FVG-TGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVY   42 (153)
T ss_dssp             EES-CCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHT
T ss_pred             EEe-CcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcc
Confidence            344 488999999988665544568999999998876653

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=83.28  E-value=0.74  Score=34.77  Aligned_cols=31  Identities=29%  Similarity=0.321  Sum_probs=27.1

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSR   32 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r   32 (259)
                      |+++|-| .|.+|.++|+.|.+.|++|+.++.
T Consensus        32 ~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD   62 (242)
T d1v9la1          32 KTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSD   62 (242)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHTTTCEEEEEEC
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCeEEEeec
Confidence            6788887 599999999999999999987763

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=83.20  E-value=0.59  Score=34.07  Aligned_cols=31  Identities=19%  Similarity=0.310  Sum_probs=27.9

Q ss_pred             EEEEcCcchHHHHHHHHHHHCCCEEEEeeCCh
Q 024994            3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQ   34 (259)
Q Consensus         3 ~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~   34 (259)
                      ++|.|| |..|.+.|..+++.|.+|.++.++.
T Consensus         5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~~   35 (217)
T d1gesa1           5 YIAIGG-GSGGIASINRAAMYGQKCALIEAKE   35 (217)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEeccC
Confidence            578888 8999999999999999999998754

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=83.00  E-value=0.85  Score=35.40  Aligned_cols=31  Identities=29%  Similarity=0.333  Sum_probs=27.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSR   32 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r   32 (259)
                      |+++|-|- |-+|.++|+.|.+.|++|+.++-
T Consensus        37 ktvaIqGf-GnVG~~~A~~L~e~Gakvv~vsD   67 (293)
T d1hwxa1          37 KTFAVQGF-GNVGLHSMRYLHRFGAKCVAVGE   67 (293)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEEc
Confidence            57888887 89999999999999999988763

>d1c4oa2 c.37.1.19 (A:410-583) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Tandem AAA-ATPase domain
domain: Nucleotide excision repair enzyme UvrB
species: Thermus thermophilus [TaxId: 274]

Probab=82.64  E-value=4.8  Score=28.35  Aligned_cols=65  Identities=14%  Similarity=0.094  Sum_probs=51.1

Q ss_pred             HHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCccEEEEcCCC
Q 024994           20 LARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAI   88 (259)
Q Consensus        20 l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~vi~~ag~   88 (259)
                      ..++|.++++...+....+.+...+.+.+.++..+..++.+.+ -++++++..+   |++++||+..-.
T Consensus        27 ~~~~g~r~lvfc~t~~~~~~l~~~L~~~Gi~a~~~Hg~~~~~e-R~~~l~~F~~---G~~~vLVaT~v~   91 (174)
T d1c4oa2          27 RAARGERTLVTVLTVRMAEELTSFLVEHGIRARYLHHELDAFK-RQALIRDLRL---GHYDCLVGINLL   91 (174)
T ss_dssp             HHHTTCEEEEECSSHHHHHHHHHHHHHTTCCEEEECTTCCHHH-HHHHHHHHHT---TSCSEEEESCCC
T ss_pred             HHhcCCcEEEEEcchhHHHHHHHHHHhcCCceEEEecccchHH-HHHHHHHHHC---CCeEEEEeeeee
Confidence            3467899999999999999999999998999999999998543 3445555444   789999987653

>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=82.61  E-value=0.52  Score=36.83  Aligned_cols=31  Identities=23%  Similarity=0.258  Sum_probs=27.4

Q ss_pred             EEEEcCcchHHHHHHHHHHHCCCEEEEeeCCh
Q 024994            3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQ   34 (259)
Q Consensus         3 ~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~   34 (259)
                      |||.|+ |..|...|.+++++|.+|+++.+..
T Consensus        22 VvVIGa-G~aGl~AA~~aa~~G~~V~vlEK~~   52 (317)
T d1qo8a2          22 VLVVGA-GSAGFNASLAAKKAGANVILVDKAP   52 (317)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            678877 8999999999999999999998753

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=82.57  E-value=2.7  Score=30.97  Aligned_cols=77  Identities=12%  Similarity=-0.042  Sum_probs=53.7

Q ss_pred             EEEEEcCcchHHHHHHHHHHH-CC----CEEEEeeCChhHHHHHHHHHHh------cCCcEEEEEecCCCHHHHHHHHHH
Q 024994            2 TALVTGGTRGIGHATVEELAR-FG----AIVHTCSRNQIELDARLHEWKN------KGFKVTGSVCDLSSREQREKLIET   70 (259)
Q Consensus         2 ~~lItG~s~giG~~~a~~l~~-~G----~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~~   70 (259)
                      +||..|+++|--.++.-+++. .|    .+|+.+.++++..+...+.+..      .-.++.++..|..+..        
T Consensus        83 ~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~~--------  154 (223)
T d1r18a_          83 RILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGY--------  154 (223)
T ss_dssp             EEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCC--------
T ss_pred             eEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEeccccccc--------
Confidence            789999999988888777765 34    4899999998876655443321      1236888888875410        


Q ss_pred             HHHHcCCCccEEEEcCCCC
Q 024994           71 VTSIFQGKLNILINNAAIA   89 (259)
Q Consensus        71 ~~~~~~~~id~vi~~ag~~   89 (259)
                        ... +++|.++.+++..
T Consensus       155 --~~~-~~fD~Iiv~~a~~  170 (223)
T d1r18a_         155 --PPN-APYNAIHVGAAAP  170 (223)
T ss_dssp             --GGG-CSEEEEEECSCBS
T ss_pred             --ccc-cceeeEEEEeech
Confidence              011 5799999988864

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=82.39  E-value=0.57  Score=33.66  Aligned_cols=32  Identities=13%  Similarity=-0.050  Sum_probs=27.7

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCC
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRN   33 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~   33 (259)
                      +.++|.|| |-.|...|..+++.|.+|+++.+.
T Consensus         6 ~~VvIIGg-GpaGl~aA~~~ar~g~~v~vie~~   37 (192)
T d1vdca1           6 TRLCIVGS-GPAAHTAAIYAARAELKPLLFEGW   37 (192)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHTTCCCEEECCS
T ss_pred             ceEEEECC-CHHHHHHHHHHHHcCCcEEEEEee
Confidence            46889998 679999999999999999988754

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=82.12  E-value=0.65  Score=28.37  Aligned_cols=35  Identities=14%  Similarity=0.130  Sum_probs=30.9

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhH
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE   36 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~   36 (259)
                      |++.|.|+ |-+|+-++..-.+-|.++++++.+.+.
T Consensus         2 k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp~~~~   36 (78)
T d3etja2           2 KQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGLDAEP   36 (78)
T ss_dssp             EEEEEEBC-SHHHHHHHHHHGGGTEEEEEECTTSCG
T ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcCCCCC
Confidence            68999998 899999999999999999999976543

>d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c)
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=82.07  E-value=5.1  Score=30.77  Aligned_cols=55  Identities=13%  Similarity=-0.072  Sum_probs=33.1

Q ss_pred             EEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecC
Q 024994            3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDL   58 (259)
Q Consensus         3 ~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~   58 (259)
                      .+|+..+|.-|.++|..-...|.+++++....... ...+.++..+.++..+..+.
T Consensus        71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~-~k~~~l~~~Ga~vi~~~~~~  125 (318)
T d1v71a1          71 GVLTFSSGNHAQAIALSAKILGIPAKIIMPLDAPE-AKVAATKGYGGQVIMYDRYK  125 (318)
T ss_dssp             CEEECCSSHHHHHHHHHHHHTTCCEEEEEETTCCH-HHHHHHHHTTCEEEEECTTT
T ss_pred             eeeeeccchhhHHHHHhhcccccceeecccccccH-HHHHHHHHcCCcEEeccCCc
Confidence            37888999999999999999888655544322211 12233444455555443333

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=81.95  E-value=0.53  Score=33.67  Aligned_cols=33  Identities=15%  Similarity=0.030  Sum_probs=28.5

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCCh
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ   34 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~   34 (259)
                      +.++|.|| |-.|...|..+++.|.+|+++.+..
T Consensus         6 ~dVvIIGG-GpaGl~AA~~~ar~g~~v~iie~~~   38 (190)
T d1trba1           6 SKLLILGS-GPAGYTAAVYAARANLQPVLITGME   38 (190)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTTTCCCEEECCSS
T ss_pred             CcEEEECC-CHHHHHHHHHHHHcCCceEEEEeec
Confidence            35889998 7799999999999999999997654

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=81.78  E-value=0.65  Score=33.82  Aligned_cols=31  Identities=16%  Similarity=0.232  Sum_probs=27.3

Q ss_pred             EEEEcCcchHHHHHHHHHHHCCCEEEEeeCCh
Q 024994            3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQ   34 (259)
Q Consensus         3 ~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~   34 (259)
                      ++|.|| |..|.+.|..+++.|.+|+++.++.
T Consensus         6 vvVIGg-GpaGl~aA~~aa~~G~kV~vie~~~   36 (221)
T d1dxla1           6 VVIIGG-GPGGYVAAIKAAQLGFKTTCIEKRG   36 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEEecC
Confidence            678888 6789999999999999999998754

>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Sporulation response regulator Spo0F
species: Bacillus subtilis [TaxId: 1423]

Probab=81.35  E-value=5.1  Score=25.95  Aligned_cols=80  Identities=13%  Similarity=0.122  Sum_probs=52.8

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCcc
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN   80 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   80 (259)
                      |++||.--...+-..+.+.|.+.|++|.......+.++.+    .+....+.+....+-+.+. -.+++++++.. ..+-
T Consensus         2 krILvVDD~~~~~~~l~~~L~~~g~~v~~a~~g~eal~~~----~~~~~dlillD~~mP~~~G-~el~~~lr~~~-~~~p   75 (119)
T d1peya_           2 EKILIVDDQSGIRILLNEVFNKEGYQTFQAANGLQALDIV----TKERPDLVLLDMKIPGMDG-IEILKRMKVID-ENIR   75 (119)
T ss_dssp             CEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHH----HHHCCSEEEEESCCTTCCH-HHHHHHHHHHC-TTCE
T ss_pred             CEEEEEeCCHHHHHHHHHHHHHcCCEEEEeCCHHHHHHHH----HhCCCCEEEEeccCCCCCH-HHHHHHHHHhC-CCCc
Confidence            7899999999999999999999999998766544444333    2323455555444445444 34566776655 4566


Q ss_pred             EEEEcC
Q 024994           81 ILINNA   86 (259)
Q Consensus        81 ~vi~~a   86 (259)
                      +++..+
T Consensus        76 vi~lt~   81 (119)
T d1peya_          76 VIIMTA   81 (119)
T ss_dssp             EEEEES
T ss_pred             EEEEec
Confidence            666554

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=81.27  E-value=3.3  Score=29.95  Aligned_cols=30  Identities=20%  Similarity=0.208  Sum_probs=24.3

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCCCEEEEee
Q 024994            1 MTALVTGGTRGIGHATVEELARFGAIVHTCS   31 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G~~V~~~~   31 (259)
                      |++++.|. +..|..+.+.|.+.|+.|..+.
T Consensus         1 Mkiv~~~~-~~~g~~~l~~L~~~g~~I~~Vv   30 (203)
T d2blna2           1 MKTVVFAY-HDMGCLGIEALLAAGYEISAIF   30 (203)
T ss_dssp             CEEEEEEC-HHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CeEEEEec-CHHHHHHHHHHHHCCCCEEEEE
Confidence            56777755 7799999999999999886543

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=81.06  E-value=0.57  Score=34.55  Aligned_cols=33  Identities=18%  Similarity=0.227  Sum_probs=28.0

Q ss_pred             CEEEEEcCcchHHHH-----HHHHHHHCCCEEEEeeCC
Q 024994            1 MTALVTGGTRGIGHA-----TVEELARFGAIVHTCSRN   33 (259)
Q Consensus         1 k~~lItG~s~giG~~-----~a~~l~~~G~~V~~~~r~   33 (259)
                      |++.|+|+-||.|+.     +|..|+++|.+|.++|-+
T Consensus         3 ~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           3 RIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             EEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             eEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            578899999999985     567888999999999855

>d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.00  E-value=2.7  Score=30.58  Aligned_cols=86  Identities=9%  Similarity=0.077  Sum_probs=55.9

Q ss_pred             EEEEEcCcchHHHHH----HHHHHHC-----CCEEEEeeCChhHHHHHHHHHH--------------hcCCcEEEEEecC
Q 024994            2 TALVTGGTRGIGHAT----VEELARF-----GAIVHTCSRNQIELDARLHEWK--------------NKGFKVTGSVCDL   58 (259)
Q Consensus         2 ~~lItG~s~giG~~~----a~~l~~~-----G~~V~~~~r~~~~~~~~~~~~~--------------~~~~~~~~~~~D~   58 (259)
                      +.+|.||||-+-+=-    -.+|...     +.+|+.++|++-..++..+.+.              ..-.++.++.+|+
T Consensus        22 t~VIFGatGDLA~RKL~PALf~L~~~g~Lp~~~~Iig~aR~~~s~e~fr~~~~~~~~~~~~~~~~~~~f~~~~~Y~~~d~  101 (203)
T d1qkia1          22 IFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDFFARNSYVAGQY  101 (203)
T ss_dssp             EEEEETTTSHHHHHTHHHHHHHHHHTTCSCSSEEEEEEBSSCCSCHHHHHHHSCCTTCCGGGHHHHHHHHTTEECCBCCT
T ss_pred             EEEEECcccHHHHhHHHHHHHHHHHcCCCCCCcEEEEEECCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHhhccccCcC
Confidence            578999999987521    1233444     4579999997644333333322              1124788899999


Q ss_pred             CCHHHHHHHHHHHHHHcC-CCccEEEEcCC
Q 024994           59 SSREQREKLIETVTSIFQ-GKLNILINNAA   87 (259)
Q Consensus        59 ~~~~~~~~~~~~~~~~~~-~~id~vi~~ag   87 (259)
                      ++.++..++-+.+.+... ..-..+++.|-
T Consensus       102 ~~~~~~~~L~~~l~~~~~~~~~~rifYLAv  131 (203)
T d1qkia1         102 DDAASYQRLNSHMNALHLGSQANRLFYLAL  131 (203)
T ss_dssp             TCHHHHHHHHHHHHHTTTTTTSEEEEEECS
T ss_pred             CChhhHHHHHHHHHHHhcCCCcceEEEEec
Confidence            999999888776665321 23557777776

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=80.92  E-value=0.41  Score=36.46  Aligned_cols=34  Identities=21%  Similarity=0.341  Sum_probs=27.8

Q ss_pred             CEEEEEcCcchHHHHH-----HHHHHHCCCEEEEeeCChh
Q 024994            1 MTALVTGGTRGIGHAT-----VEELARFGAIVHTCSRNQI   35 (259)
Q Consensus         1 k~~lItG~s~giG~~~-----a~~l~~~G~~V~~~~r~~~   35 (259)
                      |++.|+| =||+|+..     |..|+++|++|.++|-+..
T Consensus         2 r~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q   40 (269)
T d1cp2a_           2 RQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK   40 (269)
T ss_dssp             EEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred             CEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence            5788898 88999865     5589999999999998753

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=80.63  E-value=0.87  Score=32.02  Aligned_cols=30  Identities=23%  Similarity=0.190  Sum_probs=26.7

Q ss_pred             EEEEcCcchHHHHHHHHHHHCCCEEEEeeCC
Q 024994            3 ALVTGGTRGIGHATVEELARFGAIVHTCSRN   33 (259)
Q Consensus         3 ~lItG~s~giG~~~a~~l~~~G~~V~~~~r~   33 (259)
                      ++|.|| |..|...|..+++.|.+|+++.++
T Consensus         4 ViIIGg-GpaGl~AAi~aar~G~~v~iie~~   33 (184)
T d1fl2a1           4 VLIVGS-GPAGAAAAIYSARKGIRTGLMGER   33 (184)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCeEEEEEEe
Confidence            678887 899999999999999999999864

>d2h00a1 c.66.1.54 (A:5-254) Methyltransferase 10 domain containing protein METT10D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Methyltransferase 10 domain
domain: Methyltransferase 10 domain containing protein METT10D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.56  E-value=1.3  Score=33.51  Aligned_cols=81  Identities=9%  Similarity=0.004  Sum_probs=51.7

Q ss_pred             EEEEc-CcchHHHHHHHHHHHCCCEEEEeeCChhHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 024994            3 ALVTG-GTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTSIFQGKL   79 (259)
Q Consensus         3 ~lItG-~s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i   79 (259)
                      +|=.| |||-|+..+++++  .+++|++++.+++.++-+.+.++..  ..++.++..+..+.     +...+.+...+++
T Consensus        65 ~LDiGtGsg~I~~~l~~~~--~~~~~~~~Di~~~al~~A~~N~~~n~l~~~~~~~~~~~~~~-----~~~~~~~~~~~~f  137 (250)
T d2h00a1          65 GIDIGTGASCIYPLLGATL--NGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTL-----LMDALKEESEIIY  137 (250)
T ss_dssp             EEEESCTTTTHHHHHHHHH--HCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCS-----STTTSTTCCSCCB
T ss_pred             EEEeCCCchHHHHHHHHhC--CCccccceecCHHHHHHHHHHHHHhCCCcceeeeeeccHHh-----hhhhhhhcccCce
Confidence            33344 4466999888877  3799999999999988776666544  45677766554321     1111111111479


Q ss_pred             cEEEEcCCCCC
Q 024994           80 NILINNAAIAF   90 (259)
Q Consensus        80 d~vi~~ag~~~   90 (259)
                      |++|.|.=+..
T Consensus       138 D~ivsNPPY~~  148 (250)
T d2h00a1         138 DFCMCNPPFFA  148 (250)
T ss_dssp             SEEEECCCCC-
T ss_pred             eEEEecCcccc
Confidence            99999997753

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=80.33  E-value=0.9  Score=32.38  Aligned_cols=29  Identities=17%  Similarity=0.298  Sum_probs=24.4

Q ss_pred             CEEEEEcCcchHHHHHHHHHHHCC-CEEEE
Q 024994            1 MTALVTGGTRGIGHATVEELARFG-AIVHT   29 (259)
Q Consensus         1 k~~lItG~s~giG~~~a~~l~~~G-~~V~~   29 (259)
                      ++|.|.||||..|.++.+.|.++- ..+..
T Consensus         2 ikVaIiGATGyvG~eLlrlL~~HP~~ei~~   31 (179)
T d2g17a1           2 LNTLIVGASGYAGAELVSYVNRHPHMTITA   31 (179)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTEEEEE
T ss_pred             cEEEEECcccHHHHHHHHHHHhCCCCceEe
Confidence            378999999999999999999984 45543

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=80.22  E-value=0.93  Score=33.15  Aligned_cols=32  Identities=16%  Similarity=0.240  Sum_probs=27.5

Q ss_pred             EEEEcCcchHHHHHHHHHHHCCCEEEEeeCChh
Q 024994            3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQI   35 (259)
Q Consensus         3 ~lItG~s~giG~~~a~~l~~~G~~V~~~~r~~~   35 (259)
                      ++|.|| |.-|...|.++++.|.+|+++.++..
T Consensus         8 viVIG~-GpAGl~aA~~aa~~G~kV~lie~~~~   39 (233)
T d1v59a1           8 VVIIGG-GPAGYVAAIKAAQLGFNTACVEKRGK   39 (233)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEEecCC
Confidence            678888 66699999999999999999987543